VS_0864 39b3379cab668f8402eef2b6758d402c 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 6.3E-258 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VS_0864 39b3379cab668f8402eef2b6758d402c 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 4.6E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 VS_0864 39b3379cab668f8402eef2b6758d402c 435 Gene3D G3DSA:3.40.47.10 4 434 8.1E-109 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0864 39b3379cab668f8402eef2b6758d402c 435 SUPERFAMILY SSF53901 293 433 4.78E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0864 39b3379cab668f8402eef2b6758d402c 435 PIRSF PIRSF000429 8 435 6.8E-117 T 14-10-2018 IPR002155 Thiolase GO:0016747 VS_0864 39b3379cab668f8402eef2b6758d402c 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.3E-35 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VS_0864 39b3379cab668f8402eef2b6758d402c 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 1.6E-62 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VS_0864 39b3379cab668f8402eef2b6758d402c 435 SUPERFAMILY SSF53901 14 294 5.76E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_3119 590b2dfae418204a39503350ea7738fc 189 Gene3D G3DSA:3.90.870.10 3 187 2.9E-62 T 14-10-2018 VS_3119 590b2dfae418204a39503350ea7738fc 189 SUPERFAMILY SSF55821 5 186 5.49E-57 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VS_3119 590b2dfae418204a39503350ea7738fc 189 Pfam PF01300 Telomere recombination 13 189 4.7E-50 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VS_3119 590b2dfae418204a39503350ea7738fc 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 5 187 40.864 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VS_3119 590b2dfae418204a39503350ea7738fc 189 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 9 189 1.6E-38 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VS_0868 db4df54aee2b9140f765ef25e637ec39 196 Pfam PF01713 Smr domain 117 191 8.6E-19 T 14-10-2018 IPR002625 Smr domain VS_0868 db4df54aee2b9140f765ef25e637ec39 196 SMART SM00463 114 192 2.8E-17 T 14-10-2018 IPR002625 Smr domain VS_0868 db4df54aee2b9140f765ef25e637ec39 196 SUPERFAMILY SSF160443 115 191 4.18E-12 T 14-10-2018 IPR036063 Smr domain superfamily VS_0868 db4df54aee2b9140f765ef25e637ec39 196 Gene3D G3DSA:3.30.1370.110 69 195 1.6E-28 T 14-10-2018 VS_0868 db4df54aee2b9140f765ef25e637ec39 196 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 21 193 38.063 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 VS_3122 9498e4081c1a71009227c06cac58908b 189 SUPERFAMILY SSF57783 66 101 2.72E-12 T 14-10-2018 VS_3122 9498e4081c1a71009227c06cac58908b 189 SUPERFAMILY SSF57783 102 146 2.04E-7 T 14-10-2018 VS_3122 9498e4081c1a71009227c06cac58908b 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 57 2.5E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VS_3122 9498e4081c1a71009227c06cac58908b 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 1.3E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VS_3122 9498e4081c1a71009227c06cac58908b 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 5.3E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VS_3122 9498e4081c1a71009227c06cac58908b 189 SUPERFAMILY SSF57783 16 64 3.91E-14 T 14-10-2018 VS_3122 9498e4081c1a71009227c06cac58908b 189 Gene3D G3DSA:3.30.65.10 63 101 1.7E-8 T 14-10-2018 VS_3122 9498e4081c1a71009227c06cac58908b 189 Gene3D G3DSA:3.30.65.10 102 153 3.1E-5 T 14-10-2018 VS_3122 9498e4081c1a71009227c06cac58908b 189 Gene3D G3DSA:3.30.65.10 11 62 1.8E-7 T 14-10-2018 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 SUPERFAMILY SSF82282 9 400 1.05E-119 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Gene3D G3DSA:3.20.20.330 2 339 1.9E-129 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 3.8E-123 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Pfam PF00809 Pterin binding enzyme 361 599 2.0E-58 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 SUPERFAMILY SSF56507 903 1225 2.09E-130 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Gene3D G3DSA:1.10.288.10 938 1094 5.9E-145 T 14-10-2018 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 SUPERFAMILY SSF51717 357 631 5.49E-87 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Pfam PF02607 B12 binding domain 660 734 1.1E-24 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Gene3D G3DSA:3.10.196.10 909 1224 5.9E-145 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 SMART SM01018 658 741 1.2E-44 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Gene3D G3DSA:3.20.20.20 341 643 1.1E-129 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Pfam PF02310 B12 binding domain 749 842 5.4E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 SUPERFAMILY SSF47644 654 739 2.09E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 PIRSF PIRSF000381 3 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Gene3D G3DSA:3.40.50.280 745 896 7.5E-56 T 14-10-2018 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 SUPERFAMILY SSF52242 746 895 9.94E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Gene3D G3DSA:1.10.1240.10 650 738 3.5E-40 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0315 c583ad3d19023d4ef49bd6b79d1e66a5 1225 Pfam PF02574 Homocysteine S-methyltransferase 18 326 5.1E-82 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 SUPERFAMILY SSF81665 384 633 2.09E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 370 946 3.8E-183 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Gene3D G3DSA:3.30.70.100 120 179 1.0E-6 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 641 647 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Gene3D G3DSA:3.40.50.1000 620 889 1.5E-89 T 14-10-2018 IPR023214 HAD superfamily VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 SUPERFAMILY SSF81653 440 537 8.24E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Pfam PF00403 Heavy-metal-associated domain 219 276 2.9E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 409 914 5.6E-86 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 SUPERFAMILY SSF55008 120 182 1.31E-8 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 784 794 3.0E-26 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 487 501 3.0E-26 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 860 872 3.0E-26 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 653 3.0E-26 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 762 773 3.0E-26 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 837 856 3.0E-26 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00943 Copper-transporting ATPase signature 228 242 7.2E-12 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00943 Copper-transporting ATPase signature 871 885 7.2E-12 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00943 Copper-transporting ATPase signature 814 831 7.2E-12 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00943 Copper-transporting ATPase signature 355 374 7.2E-12 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00943 Copper-transporting ATPase signature 560 574 7.2E-12 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00943 Copper-transporting ATPase signature 622 637 7.2E-12 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 PRINTS PR00943 Copper-transporting ATPase signature 427 445 7.2E-12 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 352 947 2.1E-183 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Gene3D G3DSA:3.30.70.100 200 290 5.5E-17 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Pfam PF00702 haloacid dehalogenase-like hydrolase 635 851 2.1E-43 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Gene3D G3DSA:3.40.1110.10 650 769 1.5E-89 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Pfam PF00122 E1-E2 ATPase 438 618 1.6E-51 T 14-10-2018 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 SUPERFAMILY SSF55008 212 282 2.75E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 SUPERFAMILY SSF56784 638 943 2.93E-57 T 14-10-2018 IPR036412 HAD-like superfamily VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 ProSitePatterns PS01047 Heavy-metal-associated domain. 218 247 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VS_0768 e5a421aa137f0a148d2c3e26c826cf16 968 Gene3D G3DSA:2.70.150.20 430 542 6.7E-37 T 14-10-2018 VS_II0821 5adb2a196671666c1363ef2303e4bad1 227 Gene3D G3DSA:2.70.70.10 63 190 7.8E-23 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_II0821 5adb2a196671666c1363ef2303e4bad1 227 Pfam PF01551 Peptidase family M23 89 182 2.5E-18 T 14-10-2018 IPR016047 Peptidase M23 VS_II0821 5adb2a196671666c1363ef2303e4bad1 227 SUPERFAMILY SSF51261 66 184 1.52E-22 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.7E-14 T 14-10-2018 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 1.7E-14 T 14-10-2018 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 1.7E-14 T 14-10-2018 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.7E-14 T 14-10-2018 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 1.7E-14 T 14-10-2018 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.7E-14 T 14-10-2018 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 SUPERFAMILY SSF118215 30 444 4.71E-84 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 Gene3D G3DSA:1.10.3860.10 21 462 2.1E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_II1229 5522e91fc189e1d070d82ec6c2992d23 468 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 4.0E-92 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VS_1326 286907994830c05a3555c0bc5ddb6865 870 Gene3D G3DSA:3.40.50.300 364 548 9.7E-41 T 14-10-2018 VS_1326 286907994830c05a3555c0bc5ddb6865 870 Gene3D G3DSA:1.10.1780.10 1 157 5.0E-30 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_1326 286907994830c05a3555c0bc5ddb6865 870 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 351 4.1E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_1326 286907994830c05a3555c0bc5ddb6865 870 SMART SM00382 601 761 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1326 286907994830c05a3555c0bc5ddb6865 870 SMART SM00382 214 360 7.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1326 286907994830c05a3555c0bc5ddb6865 870 Gene3D G3DSA:1.10.8.60 773 868 3.6E-12 T 14-10-2018 VS_1326 286907994830c05a3555c0bc5ddb6865 870 SUPERFAMILY SSF52540 175 504 4.06E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1326 286907994830c05a3555c0bc5ddb6865 870 Gene3D G3DSA:3.40.50.300 554 771 1.5E-67 T 14-10-2018 VS_1326 286907994830c05a3555c0bc5ddb6865 870 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 767 3.0E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_1326 286907994830c05a3555c0bc5ddb6865 870 SMART SM01086 773 865 2.4E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_1326 286907994830c05a3555c0bc5ddb6865 870 SUPERFAMILY SSF52540 550 840 2.16E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1326 286907994830c05a3555c0bc5ddb6865 870 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 773 846 2.4E-11 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_1326 286907994830c05a3555c0bc5ddb6865 870 SUPERFAMILY SSF81923 15 127 1.47E-14 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_1326 286907994830c05a3555c0bc5ddb6865 870 Gene3D G3DSA:3.40.50.300 174 363 7.0E-61 T 14-10-2018 VS_1326 286907994830c05a3555c0bc5ddb6865 870 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 857 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VS_1326 286907994830c05a3555c0bc5ddb6865 870 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 310 322 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VS_1326 286907994830c05a3555c0bc5ddb6865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_1326 286907994830c05a3555c0bc5ddb6865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_1326 286907994830c05a3555c0bc5ddb6865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_1326 286907994830c05a3555c0bc5ddb6865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 1.5E-29 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_1127 a99e8216297c211e63076e649863ccc8 343 SUPERFAMILY SSF81324 8 131 5.23E-17 T 14-10-2018 VS_1127 a99e8216297c211e63076e649863ccc8 343 Gene3D G3DSA:1.10.287.70 20 102 4.9E-13 T 14-10-2018 VS_1127 a99e8216297c211e63076e649863ccc8 343 SUPERFAMILY SSF51735 121 241 7.97E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1127 a99e8216297c211e63076e649863ccc8 343 Gene3D G3DSA:3.40.50.720 112 234 2.4E-11 T 14-10-2018 VS_1127 a99e8216297c211e63076e649863ccc8 343 Pfam PF07885 Ion channel 28 100 1.4E-12 T 14-10-2018 IPR013099 Potassium channel domain VS_2156 6e7cea044690a82bf60f8eca0debb7db 109 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 98 1.3E-24 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VS_1421 7c0cbfc68d359daa9be27c0872d78a8f 1613 PIRSF PIRSF036761 1 1610 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VS_1421 7c0cbfc68d359daa9be27c0872d78a8f 1613 SUPERFAMILY SSF51735 946 1278 3.22E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1421 7c0cbfc68d359daa9be27c0872d78a8f 1613 SUPERFAMILY SSF53223 756 941 8.92E-25 T 14-10-2018 VS_1421 7c0cbfc68d359daa9be27c0872d78a8f 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 SUPERFAMILY SSF51735 315 496 2.76E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Gene3D G3DSA:1.10.1040.50 498 710 9.7E-73 T 14-10-2018 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 6.5E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 SUPERFAMILY SSF48179 624 716 1.62E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 SUPERFAMILY SSF52096 2 304 4.36E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Gene3D G3DSA:3.40.50.720 315 497 3.3E-64 T 14-10-2018 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Gene3D G3DSA:3.90.226.10 1 312 1.0E-89 T 14-10-2018 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.327 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 SUPERFAMILY SSF48179 496 603 1.62E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 205 2.4E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 1.3E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0041 cab2b5a77e1189c2aa3ad0cc042a2cb0 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 4.7E-24 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 SUPERFAMILY SSF55973 3 109 2.86E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 2.7E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 377 1.4E-194 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 PIRSF PIRSF000497 1 381 2.7E-173 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 Gene3D G3DSA:3.30.300.10 11 270 5.1E-177 T 14-10-2018 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 SUPERFAMILY SSF55973 111 232 7.46E-50 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 4.4E-43 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.6E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 SUPERFAMILY SSF55973 233 381 4.71E-70 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 Gene3D G3DSA:3.30.300.10 5 233 5.1E-177 T 14-10-2018 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.17 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 Gene3D G3DSA:3.30.300.10 102 373 5.1E-177 T 14-10-2018 VS_2655 574063ffd30b7d31d8bb05d47b958d78 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 SUPERFAMILY SSF160996 193 341 7.98E-42 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 Pfam PF03486 HI0933-like protein 5 396 1.3E-159 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 Gene3D G3DSA:2.40.30.10 191 342 3.3E-133 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.1E-8 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-8 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.1E-8 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 SUPERFAMILY SSF51905 1 397 6.49E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 3.4E-133 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 Gene3D G3DSA:3.50.50.60 8 391 3.3E-133 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.1E-6 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 3.1E-6 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 3.1E-6 T 14-10-2018 VS_0094 4457e71be9bfb1461a6ae7d26692a110 397 Gene3D G3DSA:1.10.8.260 265 325 3.3E-133 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily VS_2458 7222a43fe92127c8db1e6b973ca7c505 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 110 275 1.4E-13 T 14-10-2018 VS_2458 7222a43fe92127c8db1e6b973ca7c505 326 Gene3D G3DSA:3.40.50.1000 2 310 2.3E-167 T 14-10-2018 IPR023214 HAD superfamily VS_2458 7222a43fe92127c8db1e6b973ca7c505 326 Gene3D G3DSA:1.10.150.210 115 177 2.3E-167 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VS_2458 7222a43fe92127c8db1e6b973ca7c505 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 275 1.8E-24 T 14-10-2018 VS_2458 7222a43fe92127c8db1e6b973ca7c505 326 Gene3D G3DSA:3.30.70.2020 8 322 2.3E-167 T 14-10-2018 VS_2458 7222a43fe92127c8db1e6b973ca7c505 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 4.1E-85 T 14-10-2018 VS_2458 7222a43fe92127c8db1e6b973ca7c505 326 SUPERFAMILY SSF56784 103 312 7.32E-49 T 14-10-2018 IPR036412 HAD-like superfamily VS_II1211 6169245e702b8727afcc35744252a334 430 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 137 154 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VS_II1211 6169245e702b8727afcc35744252a334 430 Gene3D G3DSA:3.40.190.10 26 376 4.9E-114 T 14-10-2018 VS_II1211 6169245e702b8727afcc35744252a334 430 SUPERFAMILY SSF53850 23 417 4.11E-69 T 14-10-2018 VS_II1211 6169245e702b8727afcc35744252a334 430 Gene3D G3DSA:3.40.190.10 142 415 4.9E-114 T 14-10-2018 VS_II1211 6169245e702b8727afcc35744252a334 430 Pfam PF13416 Bacterial extracellular solute-binding protein 40 350 3.5E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_II0659 47275a3725b296a07d2471eb2983025f 914 Gene3D G3DSA:3.40.228.10 223 482 1.5E-237 T 14-10-2018 VS_II0659 47275a3725b296a07d2471eb2983025f 914 Gene3D G3DSA:2.40.40.20 828 903 1.4E-5 T 14-10-2018 VS_II0659 47275a3725b296a07d2471eb2983025f 914 Gene3D G3DSA:2.40.40.20 744 824 1.2E-21 T 14-10-2018 VS_II0659 47275a3725b296a07d2471eb2983025f 914 Pfam PF00384 Molybdopterin oxidoreductase 140 612 4.8E-36 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_II0659 47275a3725b296a07d2471eb2983025f 914 SUPERFAMILY SSF53706 30 690 1.01E-92 T 14-10-2018 VS_II0659 47275a3725b296a07d2471eb2983025f 914 SUPERFAMILY SSF50692 744 896 6.02E-21 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VS_II0659 47275a3725b296a07d2471eb2983025f 914 TIGRFAM TIGR02693 arsenite_ox_L: arsenite oxidase, large subunit 30 809 2.2E-113 T 14-10-2018 IPR014066 Arsenite oxidase, large subunit MetaCyc: PWY-7429 VS_II0659 47275a3725b296a07d2471eb2983025f 914 Pfam PF01568 Molydopterin dinucleotide binding domain 750 807 1.8E-8 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VS_II0659 47275a3725b296a07d2471eb2983025f 914 Gene3D G3DSA:3.30.200.200 32 690 1.5E-237 T 14-10-2018 VS_II0659 47275a3725b296a07d2471eb2983025f 914 Gene3D G3DSA:3.40.50.740 141 669 1.5E-237 T 14-10-2018 VS_0537 32f59b0b6dd4941114d9f7fbc482c07d 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 165 16.533 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VS_0537 32f59b0b6dd4941114d9f7fbc482c07d 166 ProSitePatterns PS00855 Signal peptidases II signature. 107 119 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VS_0537 32f59b0b6dd4941114d9f7fbc482c07d 166 Pfam PF01252 Signal peptidase (SPase) II 17 159 5.2E-37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VS_0537 32f59b0b6dd4941114d9f7fbc482c07d 166 TIGRFAM TIGR00077 lspA: signal peptidase II 8 163 3.4E-48 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VS_0537 32f59b0b6dd4941114d9f7fbc482c07d 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 56 64 2.0E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VS_0537 32f59b0b6dd4941114d9f7fbc482c07d 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 104 119 2.0E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VS_0537 32f59b0b6dd4941114d9f7fbc482c07d 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 2.0E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VS_2339 b9d90b83d07e34ae39763ce2397c44bd 398 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 18 390 2.4E-133 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VS_2339 b9d90b83d07e34ae39763ce2397c44bd 398 Pfam PF02684 Lipid-A-disaccharide synthetase 23 386 7.8E-125 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VS_2339 b9d90b83d07e34ae39763ce2397c44bd 398 SUPERFAMILY SSF53756 20 311 2.2E-26 T 14-10-2018 VS_2339 b9d90b83d07e34ae39763ce2397c44bd 398 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 18 392 40.573 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VS_II0774 067814e64832892f5955c578da2c85c7 811 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 275 2.9E-126 T 14-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain VS_II0774 067814e64832892f5955c578da2c85c7 811 Gene3D G3DSA:3.40.50.1820 438 635 1.4E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0774 067814e64832892f5955c578da2c85c7 811 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 795 1.0E-219 T 14-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family VS_II0774 067814e64832892f5955c578da2c85c7 811 SUPERFAMILY SSF53474 445 600 1.89E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 421 549 5.5E-5 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 Gene3D G3DSA:3.40.50.970 364 570 7.4E-49 T 14-10-2018 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 SUPERFAMILY SSF52518 381 563 6.16E-23 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 173 5.4E-27 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 SUPERFAMILY SSF52518 10 183 8.03E-28 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 PIRSF PIRSF004983 3 573 4.3E-179 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 569 32.237 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 Pfam PF16582 Middle domain of thiamine pyrophosphate 189 404 4.2E-36 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 SUPERFAMILY SSF52467 226 345 4.25E-9 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 444 2.3E-133 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 Gene3D G3DSA:3.40.50.1220 221 347 7.9E-39 T 14-10-2018 VS_2191 1f633ff6546280dc2f44469ec5e83b5c 574 Gene3D G3DSA:3.40.50.970 4 198 2.3E-56 T 14-10-2018 VS_0541 a1d7ac4315d1a741d5ce4ec2d8e6acff 556 SUPERFAMILY SSF55781 227 351 4.25E-8 T 14-10-2018 VS_0541 a1d7ac4315d1a741d5ce4ec2d8e6acff 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 1.9E-60 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VS_0541 a1d7ac4315d1a741d5ce4ec2d8e6acff 556 Gene3D G3DSA:3.30.450.40 226 352 6.6E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_0541 a1d7ac4315d1a741d5ce4ec2d8e6acff 556 Pfam PF06580 Histidine kinase 366 444 7.4E-26 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VS_0541 a1d7ac4315d1a741d5ce4ec2d8e6acff 556 SUPERFAMILY SSF55874 429 554 1.14E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0541 a1d7ac4315d1a741d5ce4ec2d8e6acff 556 Gene3D G3DSA:3.30.565.10 410 556 9.5E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0193 fe363ca76f18ee85ca4f232ea14d2174 366 SUPERFAMILY SSF53756 8 359 3.14E-61 T 14-10-2018 VS_0193 fe363ca76f18ee85ca4f232ea14d2174 366 Gene3D G3DSA:3.40.50.2000 2 155 1.8E-22 T 14-10-2018 VS_0193 fe363ca76f18ee85ca4f232ea14d2174 366 Gene3D G3DSA:3.40.50.2000 165 361 4.8E-30 T 14-10-2018 VS_0193 fe363ca76f18ee85ca4f232ea14d2174 366 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 171 290 7.5E-23 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 142 4.4E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.265 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 Gene3D G3DSA:3.40.140.10 180 295 7.4E-23 T 14-10-2018 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 SUPERFAMILY SSF53927 152 292 3.83E-32 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 3.8E-39 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 PIRSF PIRSF006334 14 295 2.8E-102 T 14-10-2018 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 294 1.2E-93 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 SUPERFAMILY SSF53927 1 146 4.52E-39 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_1716 f0575d8a88e2dd18e272547dcbb2218d 295 Gene3D G3DSA:3.40.140.10 29 179 1.6E-43 T 14-10-2018 VS_0415 40bed8f0774512b6a702b73655da1a43 418 SMART SM00304 89 141 0.0014 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0415 40bed8f0774512b6a702b73655da1a43 418 SMART SM00283 156 417 4.7E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0415 40bed8f0774512b6a702b73655da1a43 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 9.9E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0415 40bed8f0774512b6a702b73655da1a43 418 SUPERFAMILY SSF58104 109 418 3.92E-76 T 14-10-2018 VS_0415 40bed8f0774512b6a702b73655da1a43 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 4.7E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_0415 40bed8f0774512b6a702b73655da1a43 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 4.7E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_0415 40bed8f0774512b6a702b73655da1a43 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 4.7E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_0415 40bed8f0774512b6a702b73655da1a43 418 Gene3D G3DSA:1.10.287.950 89 418 7.8E-69 T 14-10-2018 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 Gene3D G3DSA:1.25.40.10 148 265 4.2E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 Pfam PF16331 TolA binding protein trimerisation 52 125 5.2E-23 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 SMART SM00028 186 219 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 SMART SM00028 222 255 6.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 10 265 16.591 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 Gene3D G3DSA:1.20.5.110 49 126 7.2E-22 T 14-10-2018 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 Pfam PF13174 Tetratricopeptide repeat 223 255 2.8E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 Pfam PF13432 Tetratricopeptide repeat 160 212 7.6E-7 T 14-10-2018 VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 264 3.8E-37 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal VS_1118 8eca0884b7771b2f7ea0d642dc1b8e51 265 SUPERFAMILY SSF48452 149 260 4.11E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0023 6fef906b7bd040252f05f049f9d94f66 306 Pfam PF00482 Type II secretion system (T2SS), protein F 139 263 1.3E-19 T 14-10-2018 IPR018076 Type II secretion system F domain VS_II1284 cda8de0495a20756b540d6f20cd77a38 274 Gene3D G3DSA:1.10.3720.10 75 273 1.5E-27 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1284 cda8de0495a20756b540d6f20cd77a38 274 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 32 273 5.7E-80 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 VS_II1284 cda8de0495a20756b540d6f20cd77a38 274 SUPERFAMILY SSF161098 79 265 1.7E-31 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1284 cda8de0495a20756b540d6f20cd77a38 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 273 5.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 SUPERFAMILY SSF81301 208 382 7.85E-61 T 14-10-2018 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 SUPERFAMILY SSF55021 665 740 1.74E-9 T 14-10-2018 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 SMART SM00954 251 361 3.3E-62 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Gene3D G3DSA:1.10.3210.10 25 206 7.2E-34 T 14-10-2018 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Gene3D G3DSA:3.30.460.10 209 341 1.3E-48 T 14-10-2018 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.1E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Pfam PF02824 TGS domain 405 464 3.6E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 SUPERFAMILY SSF109604 33 206 1.07E-40 T 14-10-2018 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 65 740 2.9E-179 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Gene3D G3DSA:3.30.70.260 663 742 2.3E-14 T 14-10-2018 VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Gene3D G3DSA:3.10.20.30 399 472 9.6E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Pfam PF13291 ACT domain 664 740 1.8E-14 T 14-10-2018 IPR002912 ACT domain VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 Pfam PF13328 HD domain 52 191 1.2E-34 T 14-10-2018 IPR003607 HD/PDEase domain VS_2611 4c403a338898eb0a2b81f5aeb81e0fd9 742 SUPERFAMILY SSF81271 398 464 1.68E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VS_2724 930627e86d0955e98c976d5334026e32 147 Gene3D G3DSA:3.10.180.10 20 146 2.9E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2724 930627e86d0955e98c976d5334026e32 147 SUPERFAMILY SSF54593 15 145 4.11E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2724 930627e86d0955e98c976d5334026e32 147 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 16 141 7.6E-12 T 14-10-2018 IPR028973 PhnB-like VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 236 251 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 149 168 1.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 257 278 1.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 281 306 1.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 149 1.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 236 256 1.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 110 129 1.7E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 168 180 5.0E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 108 117 5.0E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 208 220 5.0E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 297 307 5.0E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 180 194 5.0E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 229 241 5.0E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 112 307 4.7E-81 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 284 296 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0833 74b1b7dc3013ff885bdb505c79385f0d 309 Pfam PF00813 FliP family 112 303 2.0E-78 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 SMART SM00729 147 367 1.6E-62 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 Pfam PF01938 TRAM domain 379 440 5.8E-19 T 14-10-2018 IPR002792 TRAM domain VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 6.1E-200 T 14-10-2018 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 Gene3D G3DSA:3.80.30.20 145 377 1.7E-82 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 Gene3D G3DSA:3.40.50.12160 3 139 1.1E-33 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 SUPERFAMILY SSF102114 125 371 7.59E-60 T 14-10-2018 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 4.7E-153 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 5.5E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 Pfam PF04055 Radical SAM superfamily 151 325 8.2E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_0724 88eb5dd4b61d74d51a60e548e12a6d74 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.479 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 SUPERFAMILY SSF64288 59 236 1.88E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 Gene3D G3DSA:1.10.10.10 4 74 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 SMART SM00866 90 229 1.1E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 Gene3D G3DSA:3.40.1410.10 75 233 6.5E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 SUPERFAMILY SSF46785 3 79 2.97E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 Pfam PF07702 UTRA domain 93 229 2.8E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 SMART SM00345 10 69 9.6E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0604 78a805f7b294277671d5cef6a3734d8c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 5.5E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 SUPERFAMILY SSF111369 133 323 9.02E-14 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Pfam PF11604 Copper binding periplasmic protein CusF 498 563 6.0E-19 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Pfam PF11604 Copper binding periplasmic protein CusF 418 483 3.4E-20 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.420.20 325 414 1.1E-20 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 212 391 5.7E-31 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:1.10.287.470 162 174 3.5E-8 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.50.100 127 161 3.5E-8 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.50.320 493 565 2.0E-16 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.50.320 415 486 7.6E-18 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.420.20 101 112 3.5E-8 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 318 3.1E-75 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.50.100 206 245 2.0E-25 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.30.170 246 319 2.0E-25 T 14-10-2018 VS_II0515 90900460e8da011fe6ad231f80cf38f9 569 Gene3D G3DSA:2.40.30.170 113 126 3.5E-8 T 14-10-2018 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Gene3D G3DSA:1.20.50.20 372 430 8.2E-10 T 14-10-2018 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Pfam PF10410 DnaB-helicase binding domain of primase 374 429 3.7E-9 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Gene3D G3DSA:3.40.1360.10 245 371 1.8E-41 T 14-10-2018 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 SMART SM00400 36 90 3.0E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 TIGRFAM TIGR01391 dnaG: DNA primase 5 422 5.5E-147 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 SMART SM00493 263 334 2.2E-19 T 14-10-2018 IPR006171 TOPRIM domain VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 SUPERFAMILY SSF56731 120 429 1.15E-108 T 14-10-2018 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 SMART SM00766 453 578 3.3E-55 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Pfam PF08278 DNA primase DnaG DnaB-binding 454 577 7.0E-36 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Pfam PF13662 Toprim domain 264 331 3.9E-13 T 14-10-2018 IPR006171 TOPRIM domain VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Hamap MF_00974 DNA primase [dnaG]. 4 579 28.944 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 SUPERFAMILY SSF117023 450 581 3.53E-45 T 14-10-2018 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 PIRSF PIRSF002811 2 582 4.4E-142 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Pfam PF08275 DNA primase catalytic core, N-terminal domain 130 254 3.8E-42 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 SUPERFAMILY SSF57783 4 101 2.04E-38 T 14-10-2018 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Pfam PF01807 CHC2 zinc finger 6 101 2.4E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Gene3D G3DSA:3.90.980.10 119 244 3.1E-44 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Gene3D G3DSA:3.90.580.10 1 102 1.6E-39 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VS_0398 59e13e75e5caf27db83b9f8a66957b25 583 Gene3D G3DSA:1.10.860.10 441 583 1.0E-57 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 7.8E-29 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Pfam PF00403 Heavy-metal-associated domain 93 154 4.0E-8 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 SUPERFAMILY SSF81665 249 767 2.35E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 2.3E-161 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00943 Copper-transporting ATPase signature 423 437 2.0E-5 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 2.0E-5 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 2.0E-5 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00943 Copper-transporting ATPase signature 230 249 2.0E-5 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 2.0E-5 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Gene3D G3DSA:3.40.1110.10 511 615 3.8E-66 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 SUPERFAMILY SSF56784 500 782 1.3E-45 T 14-10-2018 IPR036412 HAD-like superfamily VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Gene3D G3DSA:3.30.70.100 84 156 1.6E-13 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 786 4.4E-124 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 3.0E-74 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Gene3D G3DSA:2.70.150.20 292 407 2.7E-31 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 4.7E-26 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Pfam PF00122 E1-E2 ATPase 318 478 3.4E-44 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 7.2E-25 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 7.2E-25 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 7.2E-25 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 7.2E-25 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 7.2E-25 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 SUPERFAMILY SSF55008 85 162 3.53E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 Gene3D G3DSA:3.40.50.1000 482 720 3.8E-66 T 14-10-2018 IPR023214 HAD superfamily VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 6.7E-154 T 14-10-2018 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VS_1464 0241ce02f7aaa4103169da62a35f0e98 790 SUPERFAMILY SSF81653 318 402 1.7E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VS_0626 8c9e845dccb755b293f8e702c4c7679b 75 Pfam PF07191 zinc-ribbons 5 69 1.1E-25 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VS_0626 8c9e845dccb755b293f8e702c4c7679b 75 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 69 8.0E-21 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VS_0626 8c9e845dccb755b293f8e702c4c7679b 75 Gene3D G3DSA:2.10.290.10 2 72 6.3E-25 T 14-10-2018 IPR029037 YfgJ-like VS_0626 8c9e845dccb755b293f8e702c4c7679b 75 SUPERFAMILY SSF161187 3 71 3.79E-24 T 14-10-2018 VS_1808 e568fab44939d94293f17838f5aa74e2 496 Pfam PF00916 Sulfate permease family 146 344 3.1E-30 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VS_1808 e568fab44939d94293f17838f5aa74e2 496 Pfam PF00916 Sulfate permease family 14 143 6.0E-27 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VS_1808 e568fab44939d94293f17838f5aa74e2 496 Gene3D G3DSA:3.30.750.24 388 484 1.5E-18 T 14-10-2018 IPR036513 STAS domain superfamily VS_1808 e568fab44939d94293f17838f5aa74e2 496 SUPERFAMILY SSF52091 402 480 4.71E-7 T 14-10-2018 IPR036513 STAS domain superfamily VS_II1385 ba38c505529e28ef22d205c33b6f11ab 315 Pfam PF01263 Aldose 1-epimerase 14 305 5.6E-35 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VS_II1385 ba38c505529e28ef22d205c33b6f11ab 315 Gene3D G3DSA:2.70.98.10 4 313 1.0E-63 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VS_II1385 ba38c505529e28ef22d205c33b6f11ab 315 SUPERFAMILY SSF74650 14 308 2.26E-47 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VS_2115 f3598b46e286b66ad0496635453cdc29 318 SUPERFAMILY SSF48008 160 292 5.49E-14 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_2115 f3598b46e286b66ad0496635453cdc29 318 SMART SM00895 162 286 9.0E-8 T 14-10-2018 IPR011711 GntR, C-terminal VS_2115 f3598b46e286b66ad0496635453cdc29 318 Gene3D G3DSA:1.10.10.10 7 74 2.7E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2115 f3598b46e286b66ad0496635453cdc29 318 SUPERFAMILY SSF46785 16 71 5.56E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2115 f3598b46e286b66ad0496635453cdc29 318 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 68 4.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_2115 f3598b46e286b66ad0496635453cdc29 318 Gene3D G3DSA:1.20.120.530 156 297 3.9E-12 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_2115 f3598b46e286b66ad0496635453cdc29 318 Pfam PF07729 FCD domain 163 285 2.0E-9 T 14-10-2018 IPR011711 GntR, C-terminal VS_II1120 20559d38839193b70a55667a3706dbfe 341 Pfam PF13602 Zinc-binding dehydrogenase 199 337 1.8E-15 T 14-10-2018 VS_II1120 20559d38839193b70a55667a3706dbfe 341 Gene3D G3DSA:3.40.50.720 136 280 2.6E-99 T 14-10-2018 VS_II1120 20559d38839193b70a55667a3706dbfe 341 SMART SM00829 20 339 2.7E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VS_II1120 20559d38839193b70a55667a3706dbfe 341 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 8 338 2.0E-116 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 VS_II1120 20559d38839193b70a55667a3706dbfe 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 98 1.1E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VS_II1120 20559d38839193b70a55667a3706dbfe 341 SUPERFAMILY SSF50129 15 154 5.17E-32 T 14-10-2018 IPR011032 GroES-like superfamily VS_II1120 20559d38839193b70a55667a3706dbfe 341 Gene3D G3DSA:3.90.180.10 31 337 2.6E-99 T 14-10-2018 VS_II1120 20559d38839193b70a55667a3706dbfe 341 SUPERFAMILY SSF51735 125 287 4.19E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 Pfam PF00162 Phosphoglycerate kinase 11 378 5.8E-138 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PIRSF PIRSF000724 4 392 1.5E-132 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 SUPERFAMILY SSF53748 8 388 8.72E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 11 388 38.021 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 36 58 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 7.4E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 Gene3D G3DSA:3.40.50.1260 15 384 6.4E-150 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2646 bd892f1b0e663ba4c3b33d00c01ffa8e 392 Gene3D G3DSA:3.40.50.1260 170 378 6.4E-150 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 Gene3D G3DSA:3.30.450.90 91 225 8.2E-56 T 14-10-2018 VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 4.7E-230 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 SUPERFAMILY SSF160246 12 78 2.2E-15 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 SMART SM00382 253 376 2.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 Gene3D G3DSA:3.40.50.300 226 500 1.1E-129 T 14-10-2018 VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 SUPERFAMILY SSF52540 107 497 2.76E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 Gene3D G3DSA:3.30.300.160 1 90 1.6E-34 T 14-10-2018 VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_0136 7ba6f04510432c7220c4cf55a77ca26d 500 Pfam PF00437 Type II/IV secretion system protein 127 392 4.0E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 3.9E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 3.9E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 Gene3D G3DSA:3.40.50.300 145 310 6.7E-41 T 14-10-2018 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 Gene3D G3DSA:1.10.8.60 312 382 1.4E-22 T 14-10-2018 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 6.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 Pfam PF00158 Sigma-54 interaction domain 147 306 5.5E-39 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 SUPERFAMILY SSF46689 350 438 6.4E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 SMART SM00382 166 303 6.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 Gene3D G3DSA:1.10.10.60 385 440 6.9E-13 T 14-10-2018 VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 SUPERFAMILY SSF52172 27 191 2.18E-6 T 14-10-2018 IPR011006 CheY-like superfamily VS_0518 09a585ad6d5bff136af5a5c76addf6f6 444 SUPERFAMILY SSF52540 146 377 4.44E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1180 88cccff4f52d28b28452e71fb57ce8e0 183 SUPERFAMILY SSF55729 4 173 4.03E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II1180 88cccff4f52d28b28452e71fb57ce8e0 183 Pfam PF13302 Acetyltransferase (GNAT) domain 29 150 3.4E-21 T 14-10-2018 IPR000182 GNAT domain VS_II1180 88cccff4f52d28b28452e71fb57ce8e0 183 Gene3D G3DSA:3.40.630.30 2 174 7.7E-43 T 14-10-2018 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 SUPERFAMILY SSF50104 127 272 3.61E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VS_2829 e5c71adc0da53de8829791db1bafbd48 274 SUPERFAMILY SSF50249 2 125 9.6E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2829 e5c71adc0da53de8829791db1bafbd48 274 Gene3D G3DSA:2.30.30.30 115 195 2.5E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.9E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.871 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 Gene3D G3DSA:2.40.50.140 1 114 5.7E-50 T 14-10-2018 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 PIRSF PIRSF002158 13 274 6.8E-99 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.3E-32 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 SMART SM01383 42 118 8.7E-45 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 SMART SM01382 124 252 1.6E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 Gene3D G3DSA:4.10.950.10 196 274 9.6E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.4E-129 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VS_2829 e5c71adc0da53de8829791db1bafbd48 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 SUPERFAMILY SSF46785 4 112 1.09E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 SUPERFAMILY SSF53850 90 298 1.81E-36 T 14-10-2018 VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 Gene3D G3DSA:3.40.190.10 164 268 7.4E-47 T 14-10-2018 VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 Gene3D G3DSA:3.40.190.10 93 293 7.4E-47 T 14-10-2018 VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 Pfam PF03466 LysR substrate binding domain 91 296 2.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 Gene3D G3DSA:1.10.10.10 4 90 1.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1365 ca4e5dc02569ca989a27ee0e6dd26afa 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.0E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 SMART SM00387 454 569 2.2E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 522 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 566 1.9E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 Pfam PF00072 Response regulator receiver domain 590 702 3.4E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 Gene3D G3DSA:1.10.287.130 310 405 1.1E-24 T 14-10-2018 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 SUPERFAMILY SSF52172 586 716 1.85E-29 T 14-10-2018 IPR011006 CheY-like superfamily VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 Gene3D G3DSA:3.40.50.2300 581 705 4.7E-30 T 14-10-2018 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 Pfam PF00512 His Kinase A (phospho-acceptor) domain 343 407 2.9E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 SMART SM00388 342 407 5.6E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 Gene3D G3DSA:3.30.450.20 19 193 9.0E-24 T 14-10-2018 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 SUPERFAMILY SSF55874 396 569 7.07E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 Gene3D G3DSA:3.30.565.10 406 569 9.1E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 SMART SM00448 588 702 1.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 566 6.8E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1129 f1f1fb08e9cca9f5b1aed23f643d00ab 818 SUPERFAMILY SSF47384 330 408 4.71E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1963 7249483e219e0fbfccebee35594bb732 206 Gene3D G3DSA:3.90.870.10 1 205 6.9E-71 T 14-10-2018 VS_1963 7249483e219e0fbfccebee35594bb732 206 Pfam PF01300 Telomere recombination 23 198 9.4E-48 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VS_1963 7249483e219e0fbfccebee35594bb732 206 SUPERFAMILY SSF55821 1 203 1.83E-65 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VS_1963 7249483e219e0fbfccebee35594bb732 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 7.4E-71 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VS_1081 fd72a509f339087e96b947dc13d418c4 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 1.2E-245 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 SUPERFAMILY SSF56712 3 614 8.37E-196 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VS_1081 fd72a509f339087e96b947dc13d418c4 876 Pfam PF01751 Toprim domain 5 148 1.2E-32 T 14-10-2018 IPR006171 TOPRIM domain VS_1081 fd72a509f339087e96b947dc13d418c4 876 Gene3D G3DSA:2.20.25.10 812 870 2.1E-26 T 14-10-2018 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Gene3D G3DSA:1.10.460.10 171 576 4.5E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VS_1081 fd72a509f339087e96b947dc13d418c4 876 SMART SM00436 139 227 1.4E-45 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 SMART SM00437 278 532 7.8E-119 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 4.5E-19 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 2.9E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Gene3D G3DSA:3.40.50.140 1 169 1.4E-65 T 14-10-2018 VS_1081 fd72a509f339087e96b947dc13d418c4 876 SUPERFAMILY SSF57783 704 747 3.57E-5 T 14-10-2018 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Gene3D G3DSA:1.10.290.10 286 410 4.5E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VS_1081 fd72a509f339087e96b947dc13d418c4 876 SMART SM00493 3 138 4.9E-33 T 14-10-2018 IPR006171 TOPRIM domain VS_1081 fd72a509f339087e96b947dc13d418c4 876 Gene3D G3DSA:3.30.65.10 749 811 8.1E-33 T 14-10-2018 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Gene3D G3DSA:3.30.65.10 702 748 1.6E-5 T 14-10-2018 VS_1081 fd72a509f339087e96b947dc13d418c4 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VS_1081 fd72a509f339087e96b947dc13d418c4 876 SUPERFAMILY SSF57783 813 869 3.74E-22 T 14-10-2018 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 736 54.068 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 749 7.4E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 3.5E-5 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VS_1081 fd72a509f339087e96b947dc13d418c4 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Pfam PF01131 DNA topoisomerase 163 570 1.6E-126 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_1081 fd72a509f339087e96b947dc13d418c4 876 Gene3D G3DSA:2.70.20.10 219 478 4.5E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VS_1081 fd72a509f339087e96b947dc13d418c4 876 SUPERFAMILY SSF57783 748 811 1.21E-19 T 14-10-2018 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.9E-190 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 Gene3D G3DSA:3.40.1750.10 186 497 1.4E-160 T 14-10-2018 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 PIRSF PIRSF001217 8 616 4.0E-224 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 SUPERFAMILY SSF52096 313 529 9.12E-45 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_0937 494ceec6d5b6d80fec79e941af939f54 616 SUPERFAMILY SSF52096 37 284 1.86E-26 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_0937 494ceec6d5b6d80fec79e941af939f54 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 1.6E-52 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 Gene3D G3DSA:3.90.226.10 94 314 1.4E-160 T 14-10-2018 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 Pfam PF01343 Peptidase family S49 391 541 1.3E-46 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 Pfam PF01343 Peptidase family S49 138 287 1.2E-29 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VS_0937 494ceec6d5b6d80fec79e941af939f54 616 Gene3D G3DSA:3.90.226.10 315 539 1.4E-160 T 14-10-2018 VS_0646 96ced3dc14a97ac95ff6fb4d8311d923 554 Gene3D G3DSA:3.40.50.300 1 233 2.8E-43 T 14-10-2018 VS_0646 96ced3dc14a97ac95ff6fb4d8311d923 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.1E-172 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VS_0646 96ced3dc14a97ac95ff6fb4d8311d923 554 PIRSF PIRSF003128 1 554 8.1E-163 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VS_0646 96ced3dc14a97ac95ff6fb4d8311d923 554 SUPERFAMILY SSF52540 1 510 3.84E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0646 96ced3dc14a97ac95ff6fb4d8311d923 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 503 1.6E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VS_0646 96ced3dc14a97ac95ff6fb4d8311d923 554 Gene3D G3DSA:3.40.50.300 248 553 1.2E-51 T 14-10-2018 VS_0228 cd1add024590749bf5335e5df6030d9c 298 Gene3D G3DSA:3.90.550.10 7 297 7.3E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0228 cd1add024590749bf5335e5df6030d9c 298 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 10 294 6.3E-153 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VS_0228 cd1add024590749bf5335e5df6030d9c 298 Pfam PF00483 Nucleotidyl transferase 10 246 3.5E-68 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VS_0228 cd1add024590749bf5335e5df6030d9c 298 SUPERFAMILY SSF53448 10 294 6.07E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2330 1276628682cb00a35982a2f99d83043f 523 SMART SM00257 414 458 1.4E-13 T 14-10-2018 IPR018392 LysM domain VS_2330 1276628682cb00a35982a2f99d83043f 523 SMART SM00257 340 383 2.9E-13 T 14-10-2018 IPR018392 LysM domain VS_2330 1276628682cb00a35982a2f99d83043f 523 SMART SM00257 471 515 1.2E-8 T 14-10-2018 IPR018392 LysM domain VS_2330 1276628682cb00a35982a2f99d83043f 523 Gene3D G3DSA:3.10.350.10 396 466 2.6E-15 T 14-10-2018 IPR036779 LysM domain superfamily VS_2330 1276628682cb00a35982a2f99d83043f 523 Pfam PF01476 LysM domain 472 514 6.7E-10 T 14-10-2018 IPR018392 LysM domain VS_2330 1276628682cb00a35982a2f99d83043f 523 Pfam PF01476 LysM domain 341 383 7.6E-12 T 14-10-2018 IPR018392 LysM domain VS_2330 1276628682cb00a35982a2f99d83043f 523 Pfam PF01476 LysM domain 415 458 2.1E-12 T 14-10-2018 IPR018392 LysM domain VS_2330 1276628682cb00a35982a2f99d83043f 523 SUPERFAMILY SSF53955 109 260 2.03E-39 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_2330 1276628682cb00a35982a2f99d83043f 523 SUPERFAMILY SSF54106 413 458 4.45E-11 T 14-10-2018 VS_2330 1276628682cb00a35982a2f99d83043f 523 Gene3D G3DSA:3.10.350.10 469 517 1.5E-12 T 14-10-2018 IPR036779 LysM domain superfamily VS_2330 1276628682cb00a35982a2f99d83043f 523 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 130 158 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VS_2330 1276628682cb00a35982a2f99d83043f 523 Pfam PF01464 Transglycosylase SLT domain 124 223 3.5E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VS_2330 1276628682cb00a35982a2f99d83043f 523 SUPERFAMILY SSF54106 339 383 3.4E-10 T 14-10-2018 VS_2330 1276628682cb00a35982a2f99d83043f 523 Gene3D G3DSA:1.10.530.10 106 258 2.5E-27 T 14-10-2018 VS_2330 1276628682cb00a35982a2f99d83043f 523 Gene3D G3DSA:3.10.350.10 336 395 2.2E-14 T 14-10-2018 IPR036779 LysM domain superfamily VS_2330 1276628682cb00a35982a2f99d83043f 523 SUPERFAMILY SSF54106 470 515 4.58E-9 T 14-10-2018 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 321 22.692 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 Pfam PF11734 TilS substrate C-terminal domain 385 454 1.0E-24 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 SUPERFAMILY SSF52402 14 233 3.1E-62 T 14-10-2018 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 SUPERFAMILY SSF82829 256 331 1.96E-25 T 14-10-2018 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 Gene3D G3DSA:3.40.50.620 11 233 1.0E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 Gene3D G3DSA:1.20.59.20 249 331 5.5E-27 T 14-10-2018 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 Pfam PF09179 TilS substrate binding domain 260 327 5.8E-18 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 SMART SM00977 385 456 4.8E-22 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 Pfam PF01171 PP-loop family 22 200 3.8E-56 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 2.4E-51 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 SUPERFAMILY SSF56037 335 454 1.99E-27 T 14-10-2018 VS_2335 e5f91c7706eb2e4825cc73844ea51eaf 456 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 387 431 1.0E-16 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VS_2120 803909a172453bf5446b7ddea38a617f 698 SUPERFAMILY SSF52833 582 692 8.2E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2120 803909a172453bf5446b7ddea38a617f 698 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 511 2.8E-9 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VS_2120 803909a172453bf5446b7ddea38a617f 698 Gene3D G3DSA:3.40.30.10 582 693 7.3E-7 T 14-10-2018 VS_2120 803909a172453bf5446b7ddea38a617f 698 Pfam PF13899 Thioredoxin-like 589 669 8.5E-7 T 14-10-2018 VS_2120 803909a172453bf5446b7ddea38a617f 698 Pfam PF11412 Disulphide bond corrector protein DsbC 62 163 4.5E-13 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VS_II1278 6eb532480187b17d3c0bec58820799ef 215 Pfam PF03922 OmpW family 23 215 5.1E-72 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 VS_II1278 6eb532480187b17d3c0bec58820799ef 215 Gene3D G3DSA:2.40.160.20 22 215 4.0E-82 T 14-10-2018 VS_II1278 6eb532480187b17d3c0bec58820799ef 215 SUPERFAMILY SSF56925 23 215 8.89E-33 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_2694 2d75513ccfff2b688d898e39a80e9672 377 SUPERFAMILY SSF53955 188 370 1.07E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_2694 2d75513ccfff2b688d898e39a80e9672 377 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VS_2694 2d75513ccfff2b688d898e39a80e9672 377 Gene3D G3DSA:1.10.530.10 190 370 4.6E-51 T 14-10-2018 VS_2694 2d75513ccfff2b688d898e39a80e9672 377 Pfam PF01464 Transglycosylase SLT domain 211 335 1.8E-29 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VS_2694 2d75513ccfff2b688d898e39a80e9672 377 Pfam PF11873 Domain of unknown function (DUF3393) 4 206 1.8E-77 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VS_0477 2621e369ff625c20886639e9c07232a6 795 SMART SM00387 394 510 2.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0477 2621e369ff625c20886639e9c07232a6 795 SMART SM00388 282 347 2.8E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0477 2621e369ff625c20886639e9c07232a6 795 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0477 2621e369ff625c20886639e9c07232a6 795 SMART SM00448 527 638 1.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0477 2621e369ff625c20886639e9c07232a6 795 Pfam PF01627 Hpt domain 708 776 4.7E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_0477 2621e369ff625c20886639e9c07232a6 795 SMART SM00073 695 792 5.3E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_0477 2621e369ff625c20886639e9c07232a6 795 Gene3D G3DSA:3.40.50.2300 513 646 1.2E-26 T 14-10-2018 VS_0477 2621e369ff625c20886639e9c07232a6 795 SUPERFAMILY SSF47226 680 794 2.49E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0477 2621e369ff625c20886639e9c07232a6 795 Gene3D G3DSA:1.10.287.130 268 345 4.5E-22 T 14-10-2018 VS_0477 2621e369ff625c20886639e9c07232a6 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0477 2621e369ff625c20886639e9c07232a6 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0477 2621e369ff625c20886639e9c07232a6 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0477 2621e369ff625c20886639e9c07232a6 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0477 2621e369ff625c20886639e9c07232a6 795 SUPERFAMILY SSF47384 270 347 4.12E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0477 2621e369ff625c20886639e9c07232a6 795 Gene3D G3DSA:3.30.450.20 151 267 1.9E-21 T 14-10-2018 VS_0477 2621e369ff625c20886639e9c07232a6 795 Gene3D G3DSA:1.10.287.970 1 89 4.9E-38 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VS_0477 2621e369ff625c20886639e9c07232a6 795 Pfam PF00072 Response regulator receiver domain 529 638 2.7E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0477 2621e369ff625c20886639e9c07232a6 795 Gene3D G3DSA:1.20.120.160 678 795 4.4E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0477 2621e369ff625c20886639e9c07232a6 795 Gene3D G3DSA:3.30.565.10 348 512 1.5E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0477 2621e369ff625c20886639e9c07232a6 795 SUPERFAMILY SSF55874 336 507 6.55E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0477 2621e369ff625c20886639e9c07232a6 795 SUPERFAMILY SSF55785 140 267 1.47E-24 T 14-10-2018 IPR035965 PAS domain superfamily VS_0477 2621e369ff625c20886639e9c07232a6 795 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 2.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0477 2621e369ff625c20886639e9c07232a6 795 PIRSF PIRSF003182 1 795 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VS_0477 2621e369ff625c20886639e9c07232a6 795 SUPERFAMILY SSF52172 525 642 6.83E-25 T 14-10-2018 IPR011006 CheY-like superfamily VS_0477 2621e369ff625c20886639e9c07232a6 795 Pfam PF08448 PAS fold 162 271 1.5E-17 T 14-10-2018 IPR013656 PAS fold-4 VS_0477 2621e369ff625c20886639e9c07232a6 795 SMART SM00091 155 221 8.9E-8 T 14-10-2018 IPR000014 PAS domain VS_0477 2621e369ff625c20886639e9c07232a6 795 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.9E-19 T 14-10-2018 IPR000014 PAS domain VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 Gene3D G3DSA:1.20.5.440 92 135 1.2E-17 T 14-10-2018 VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.1E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 SUPERFAMILY SSF46604 89 137 7.32E-13 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 2.4E-9 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 SUPERFAMILY SSF51344 5 87 4.45E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 4.8E-43 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.013 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 Gene3D G3DSA:2.60.15.10 4 91 1.9E-30 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3151 8aa537d4615f0f443a2b8bc61b1e36b1 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 3.0E-37 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_1843 790d175a35d03923ac3fc06e285db578 435 Gene3D G3DSA:1.20.1600.10 21 430 5.5E-78 T 14-10-2018 VS_1843 790d175a35d03923ac3fc06e285db578 435 Pfam PF02321 Outer membrane efflux protein 231 415 2.1E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1843 790d175a35d03923ac3fc06e285db578 435 Pfam PF02321 Outer membrane efflux protein 23 211 5.1E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1843 790d175a35d03923ac3fc06e285db578 435 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 429 4.1E-114 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VS_1843 790d175a35d03923ac3fc06e285db578 435 SUPERFAMILY SSF56954 22 430 6.8E-84 T 14-10-2018 VS_1681 59bad3bbf715c93d53f078ba7834eaa2 78 SUPERFAMILY SSF52833 2 68 1.31E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1681 59bad3bbf715c93d53f078ba7834eaa2 78 Pfam PF00462 Glutaredoxin 4 60 5.4E-10 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VS_1681 59bad3bbf715c93d53f078ba7834eaa2 78 Gene3D G3DSA:3.40.30.10 2 77 3.1E-14 T 14-10-2018 VS_1681 59bad3bbf715c93d53f078ba7834eaa2 78 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 Gene3D G3DSA:3.30.70.260 385 455 1.5E-16 T 14-10-2018 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 PIRSF PIRSF000726 9 455 4.7E-129 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 SUPERFAMILY SSF55021 304 399 3.04E-18 T 14-10-2018 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 SUPERFAMILY SSF53633 12 299 1.83E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 12 455 2.2E-121 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 SUPERFAMILY SSF55021 380 454 2.29E-14 T 14-10-2018 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 Gene3D G3DSA:3.30.70.260 316 384 2.3E-27 T 14-10-2018 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 Gene3D G3DSA:3.40.1160.10 12 296 9.1E-97 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 Pfam PF00696 Amino acid kinase family 12 284 7.1E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 12 455 4.9E-120 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0316 1a3a42bc016b7b8fb8220abe0d17cc92 455 Gene3D G3DSA:1.20.120.1320 48 141 9.1E-97 T 14-10-2018 VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 371 523 3.3E-34 T 14-10-2018 IPR000160 GGDEF domain VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 525 3.5E-34 T 14-10-2018 IPR000160 GGDEF domain VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 SUPERFAMILY SSF48452 33 228 6.32E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 Gene3D G3DSA:3.30.70.270 366 527 1.6E-42 T 14-10-2018 VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 SUPERFAMILY SSF48452 198 315 6.45E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 SUPERFAMILY SSF55073 375 525 2.2E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 Gene3D G3DSA:1.25.40.10 34 365 7.4E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0193 cf4bf967e73d23de583cd4bf8f3a80a1 527 SMART SM00267 359 527 7.0E-35 T 14-10-2018 IPR000160 GGDEF domain VS_0720 88fccc23f79bef1452df3999b58595e6 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.13 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VS_0720 88fccc23f79bef1452df3999b58595e6 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 2.0E-95 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VS_0720 88fccc23f79bef1452df3999b58595e6 505 Gene3D G3DSA:3.60.110.10 217 475 9.5E-14 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VS_0720 88fccc23f79bef1452df3999b58595e6 505 Pfam PF00795 Carbon-nitrogen hydrolase 233 469 1.3E-34 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VS_0720 88fccc23f79bef1452df3999b58595e6 505 SUPERFAMILY SSF56317 214 485 1.83E-37 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VS_2186 7e9e0396e4ec78108598c9c5aaa61203 487 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_2186 7e9e0396e4ec78108598c9c5aaa61203 487 Pfam PF02378 Phosphotransferase system, EIIC 11 324 6.5E-70 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_2186 7e9e0396e4ec78108598c9c5aaa61203 487 Gene3D G3DSA:3.30.1360.60 411 487 5.4E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_2186 7e9e0396e4ec78108598c9c5aaa61203 487 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 483 4.4E-189 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VS_2186 7e9e0396e4ec78108598c9c5aaa61203 487 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 6.3E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VS_2186 7e9e0396e4ec78108598c9c5aaa61203 487 SUPERFAMILY SSF55604 412 485 3.27E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_2186 7e9e0396e4ec78108598c9c5aaa61203 487 Pfam PF00367 phosphotransferase system, EIIB 414 446 1.1E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.492 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 Gene3D G3DSA:3.40.50.20 1 120 2.4E-53 T 14-10-2018 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 SUPERFAMILY SSF52440 2 110 1.29E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 8.0E-189 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 SUPERFAMILY SSF51246 317 389 4.55E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 Pfam PF02222 ATP-grasp domain 121 292 1.8E-56 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 80 1.3E-4 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 Gene3D G3DSA:3.30.1490.20 121 194 2.8E-32 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 SUPERFAMILY SSF56059 111 313 9.19E-56 T 14-10-2018 VS_1717 96c6930a8bcf13dba359bdb222b153cb 391 Gene3D G3DSA:3.30.470.20 195 389 4.3E-58 T 14-10-2018 VS_II0745 61381b02fe47535663362325adeaae1e 322 Gene3D G3DSA:1.10.150.130 28 127 5.1E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VS_II0745 61381b02fe47535663362325adeaae1e 322 Gene3D G3DSA:1.10.443.10 129 304 2.4E-32 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VS_II0745 61381b02fe47535663362325adeaae1e 322 SUPERFAMILY SSF47823 30 120 1.02E-18 T 14-10-2018 VS_II0745 61381b02fe47535663362325adeaae1e 322 Pfam PF00589 Phage integrase family 141 302 6.9E-11 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VS_II0745 61381b02fe47535663362325adeaae1e 322 SUPERFAMILY SSF56349 139 307 1.18E-25 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.0E-225 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.7E-85 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 SUPERFAMILY SSF53067 255 495 6.85E-84 T 14-10-2018 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 2.8E-59 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.047 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 PIRSF PIRSF000538 4 503 1.3E-176 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 SUPERFAMILY SSF53067 5 256 5.46E-94 T 14-10-2018 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 Gene3D G3DSA:3.30.420.40 2 254 6.3E-113 T 14-10-2018 VS_II0115 3f90817737d53529abb0e4860c43d4c4 507 Gene3D G3DSA:3.30.420.40 255 501 1.8E-91 T 14-10-2018 VS_II0464 cc57fd85232d73318311c198705ae7ef 336 TIGRFAM TIGR00874 talAB: transaldolase 23 336 2.4E-154 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_II0464 cc57fd85232d73318311c198705ae7ef 336 ProSitePatterns PS01054 Transaldolase signature 1. 51 59 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_II0464 cc57fd85232d73318311c198705ae7ef 336 ProSitePatterns PS00958 Transaldolase active site. 149 166 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_II0464 cc57fd85232d73318311c198705ae7ef 336 SUPERFAMILY SSF51569 21 335 2.09E-112 T 14-10-2018 VS_II0464 cc57fd85232d73318311c198705ae7ef 336 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 34 332 4.9E-99 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_II0464 cc57fd85232d73318311c198705ae7ef 336 Gene3D G3DSA:3.20.20.70 22 336 7.7E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0464 cc57fd85232d73318311c198705ae7ef 336 Hamap MF_00492 Transaldolase [tal]. 22 336 50.789 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 5.1E-39 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Gene3D G3DSA:2.30.42.20 531 720 2.2E-46 T 14-10-2018 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Pfam PF08676 MutL C terminal dimerisation domain 531 649 1.2E-22 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Gene3D G3DSA:3.30.565.10 1 216 5.3E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 SMART SM00853 534 682 7.4E-9 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 SUPERFAMILY SSF55874 1 206 6.16E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 SUPERFAMILY SSF118116 530 722 1.16E-33 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 SUPERFAMILY SSF54211 191 330 8.34E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 721 24.858 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 SMART SM01340 212 330 2.1E-57 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 5.1E-101 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Gene3D G3DSA:3.30.230.10 217 328 9.1E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Gene3D G3DSA:3.30.1370.100 575 676 2.2E-46 T 14-10-2018 VS_0268 47855f8f63f8c930d692ad2c7d3848cb 723 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 123 5.8E-12 T 14-10-2018 VS_1811 a2cd60c602f01949defeac0182395ccc 386 Pfam PF00089 Trypsin 46 157 3.9E-7 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VS_1811 a2cd60c602f01949defeac0182395ccc 386 Gene3D G3DSA:2.40.10.10 49 247 3.6E-11 T 14-10-2018 VS_1811 a2cd60c602f01949defeac0182395ccc 386 SUPERFAMILY SSF50494 46 218 3.98E-13 T 14-10-2018 IPR009003 Peptidase S1, PA clan VS_II0705 a1424972c2247737e472bc614a9fdb3c 365 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 63.772 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_II0705 a1424972c2247737e472bc614a9fdb3c 365 SUPERFAMILY SSF53901 7 324 4.16E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_II0705 a1424972c2247737e472bc614a9fdb3c 365 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 2.6E-108 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_II0705 a1424972c2247737e472bc614a9fdb3c 365 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 5.9E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_II0705 a1424972c2247737e472bc614a9fdb3c 365 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 5.8E-33 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_II0705 a1424972c2247737e472bc614a9fdb3c 365 Gene3D G3DSA:3.40.47.10 1 362 2.9E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Pfam PF04408 Helicase associated domain (HA2) 514 614 3.9E-18 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 SMART SM00490 352 452 1.1E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 679 755 2.0E-23 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Gene3D G3DSA:3.40.50.300 301 469 4.8E-55 T 14-10-2018 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 SMART SM00487 123 307 2.3E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Pfam PF11898 Domain of unknown function (DUF3418) 769 1353 3.4E-230 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 62 1353 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Gene3D G3DSA:1.20.120.1080 496 607 1.8E-17 T 14-10-2018 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 SMART SM00847 512 616 9.1E-35 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Pfam PF00270 DEAD/DEAH box helicase 135 281 1.3E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Gene3D G3DSA:3.40.50.300 74 300 8.0E-78 T 14-10-2018 VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 SUPERFAMILY SSF52540 122 624 3.7E-113 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 SMART SM00382 140 432 7.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1775 eaa8bd449dead672554bea5f9156dbd5 1355 Pfam PF00271 Helicase conserved C-terminal domain 332 451 3.5E-12 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1899 545e3ad09d65cd45fbe02ad3db95a197 132 Pfam PF07972 NrdI Flavodoxin like 3 121 7.3E-45 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI VS_1899 545e3ad09d65cd45fbe02ad3db95a197 132 Hamap MF_00128 Protein NrdI [nrdI]. 1 131 32.956 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial VS_1899 545e3ad09d65cd45fbe02ad3db95a197 132 Gene3D G3DSA:3.40.50.360 1 132 2.2E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_1899 545e3ad09d65cd45fbe02ad3db95a197 132 SUPERFAMILY SSF52218 1 130 2.79E-23 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_1899 545e3ad09d65cd45fbe02ad3db95a197 132 PIRSF PIRSF005087 1 132 5.0E-50 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI VS_1899 545e3ad09d65cd45fbe02ad3db95a197 132 TIGRFAM TIGR00333 nrdI: nrdI protein 3 129 3.2E-46 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 Gene3D G3DSA:3.20.20.70 138 284 3.3E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 Gene3D G3DSA:3.90.1170.20 21 293 3.3E-126 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.3E-93 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.2E-57 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 SUPERFAMILY SSF54675 13 128 5.49E-32 T 14-10-2018 VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 SUPERFAMILY SSF51690 130 294 1.06E-58 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 PIRSF PIRSF006250 16 296 2.7E-99 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VS_2546 2ccf13f8936fb19dcdc60e569ebabd0a 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 1.6E-26 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VS_1861 acf4b5e15941e1ec646dbdb18db5804f 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-42 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VS_1861 acf4b5e15941e1ec646dbdb18db5804f 92 Pfam PF01386 Ribosomal L25p family 4 89 2.2E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VS_1861 acf4b5e15941e1ec646dbdb18db5804f 92 Gene3D G3DSA:2.40.240.10 1 92 6.7E-34 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_1861 acf4b5e15941e1ec646dbdb18db5804f 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 25.734 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VS_1861 acf4b5e15941e1ec646dbdb18db5804f 92 SUPERFAMILY SSF50715 1 92 2.96E-27 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_II0765 06daa43d0a79b95a93f6d5bf8cfe7a45 290 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 163 264 5.5E-16 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VS_II0765 06daa43d0a79b95a93f6d5bf8cfe7a45 290 SUPERFAMILY SSF51197 18 287 3.02E-61 T 14-10-2018 VS_II0765 06daa43d0a79b95a93f6d5bf8cfe7a45 290 Gene3D G3DSA:2.60.120.330 11 290 1.9E-94 T 14-10-2018 IPR027443 Isopenicillin N synthase-like VS_II0765 06daa43d0a79b95a93f6d5bf8cfe7a45 290 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 22 106 7.0E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain VS_0885 8c26846f30cae6eccdc342f3acee87bb 332 Gene3D G3DSA:1.10.8.350 44 207 1.6E-91 T 14-10-2018 VS_0885 8c26846f30cae6eccdc342f3acee87bb 332 Pfam PF13406 Transglycosylase SLT domain 31 327 6.1E-109 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 VS_0885 8c26846f30cae6eccdc342f3acee87bb 332 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 31 330 1.2E-110 T 14-10-2018 IPR011970 Lytic murein transglycosylase VS_0885 8c26846f30cae6eccdc342f3acee87bb 332 Gene3D G3DSA:1.10.530.10 74 326 1.6E-91 T 14-10-2018 VS_0885 8c26846f30cae6eccdc342f3acee87bb 332 SUPERFAMILY SSF53955 23 330 9.0E-99 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 Gene3D G3DSA:3.30.70.260 328 408 2.0E-32 T 14-10-2018 VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 SUPERFAMILY SSF55021 333 408 1.34E-17 T 14-10-2018 VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 Gene3D G3DSA:3.40.50.720 109 297 1.3E-110 T 14-10-2018 VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 SUPERFAMILY SSF51735 108 295 4.54E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 SUPERFAMILY SSF52283 7 136 1.13E-48 T 14-10-2018 VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.9E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 2.2E-38 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VS_2640 fb546b83ce50049b80dd4ddef106b56e 409 Gene3D G3DSA:3.40.50.720 14 312 1.3E-110 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 5.1E-244 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:3.30.70.1430 42 810 4.3E-271 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:3.30.70.1440 663 860 4.3E-271 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 SUPERFAMILY SSF82693 137 328 1.07E-22 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 SUPERFAMILY SSF82693 46 127 4.71E-20 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 SUPERFAMILY SSF82866 294 498 1.57E-42 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:1.20.1640.10 510 1030 4.3E-271 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 SUPERFAMILY SSF82866 798 1037 2.22E-51 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:3.30.2090.10 181 272 4.3E-271 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:1.20.1640.10 12 509 4.3E-271 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 SUPERFAMILY SSF82714 716 800 1.03E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 4.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 4.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:3.30.2090.10 714 802 4.3E-271 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 SUPERFAMILY SSF82714 185 269 5.1E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:3.30.70.1430 560 662 4.3E-271 T 14-10-2018 VS_II0516 4a7479387d13f8c655700a8751ca28b9 1047 Gene3D G3DSA:3.30.70.1320 135 330 4.3E-271 T 14-10-2018 VS_1476 1ddd39e216bebf80a77e28c9d9781215 256 Gene3D G3DSA:1.10.3720.10 4 255 7.1E-47 T 14-10-2018 IPR035906 MetI-like superfamily VS_1476 1ddd39e216bebf80a77e28c9d9781215 256 SUPERFAMILY SSF161098 5 254 6.73E-55 T 14-10-2018 IPR035906 MetI-like superfamily VS_1476 1ddd39e216bebf80a77e28c9d9781215 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 250 1.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 Gene3D G3DSA:1.10.1670.10 11 203 1.5E-75 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 Gene3D G3DSA:1.10.340.30 21 132 1.5E-75 T 14-10-2018 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.3E-86 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 SMART SM00478 38 185 8.4E-52 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.6E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.968 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 SMART SM00525 186 206 1.8E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 SUPERFAMILY SSF48150 6 208 2.83E-69 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 PIRSF PIRSF001435 1 210 2.2E-49 T 14-10-2018 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.2E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VS_0971 0c20d84dfe63ddfc4a302e32d4dc2e9a 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 5.8E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VS_II1153 f74273c2291e32577568affae4dc02be 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 6.0E-17 T 14-10-2018 IPR022569 Ferredoxin, C-terminal VS_II1153 f74273c2291e32577568affae4dc02be 107 SUPERFAMILY SSF54862 3 87 1.28E-22 T 14-10-2018 VS_II1153 f74273c2291e32577568affae4dc02be 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.5E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VS_II1153 f74273c2291e32577568affae4dc02be 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.5E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VS_II1153 f74273c2291e32577568affae4dc02be 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.5E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VS_II1153 f74273c2291e32577568affae4dc02be 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 9.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_II1153 f74273c2291e32577568affae4dc02be 107 Gene3D G3DSA:3.30.70.20 2 105 1.1E-26 T 14-10-2018 VS_3101 dce16fcada9ee8d611c51db32cf22280 460 SUPERFAMILY SSF49503 287 459 5.56E-34 T 14-10-2018 IPR008972 Cupredoxin VS_3101 dce16fcada9ee8d611c51db32cf22280 460 Gene3D G3DSA:2.60.40.420 308 460 9.0E-38 T 14-10-2018 IPR008972 Cupredoxin VS_3101 dce16fcada9ee8d611c51db32cf22280 460 SUPERFAMILY SSF49503 158 271 1.54E-16 T 14-10-2018 IPR008972 Cupredoxin VS_3101 dce16fcada9ee8d611c51db32cf22280 460 Gene3D G3DSA:2.60.40.420 160 306 1.1E-23 T 14-10-2018 IPR008972 Cupredoxin VS_3101 dce16fcada9ee8d611c51db32cf22280 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 VS_3101 dce16fcada9ee8d611c51db32cf22280 460 Gene3D G3DSA:2.60.40.420 7 153 6.7E-44 T 14-10-2018 IPR008972 Cupredoxin VS_3101 dce16fcada9ee8d611c51db32cf22280 460 Pfam PF07732 Multicopper oxidase 52 156 3.2E-38 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 VS_3101 dce16fcada9ee8d611c51db32cf22280 460 Pfam PF07731 Multicopper oxidase 357 459 4.4E-26 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 VS_3101 dce16fcada9ee8d611c51db32cf22280 460 Pfam PF00394 Multicopper oxidase 174 272 1.4E-7 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 VS_3101 dce16fcada9ee8d611c51db32cf22280 460 SUPERFAMILY SSF49503 33 154 1.27E-38 T 14-10-2018 IPR008972 Cupredoxin VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 SMART SM00388 282 349 5.0E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 SMART SM00387 387 485 4.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 Gene3D G3DSA:1.10.287.130 289 346 1.6E-16 T 14-10-2018 VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 Pfam PF11884 Domain of unknown function (DUF3404) 23 281 1.2E-111 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 Gene3D G3DSA:3.30.565.10 347 482 1.6E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 338 2.7E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 SUPERFAMILY SSF55874 360 486 5.63E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 SUPERFAMILY SSF47384 277 348 5.49E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0735 b8a0a64b599fe642a21dba88497f2e53 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 483 8.1E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1138 6c007be789b3dd1df203a120434cf3de 668 SMART SM00316 566 650 1.1E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 SUPERFAMILY SSF50249 8 80 7.01E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_II1138 6c007be789b3dd1df203a120434cf3de 668 SUPERFAMILY SSF50249 569 649 8.1E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_II1138 6c007be789b3dd1df203a120434cf3de 668 SUPERFAMILY SSF50249 83 173 6.59E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_II1138 6c007be789b3dd1df203a120434cf3de 668 Pfam PF00575 S1 RNA binding domain 567 645 7.2E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 Pfam PF00773 RNB domain 193 521 8.4E-85 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 SMART SM00955 193 523 2.9E-111 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 Gene3D G3DSA:2.40.50.640 83 157 2.7E-30 T 14-10-2018 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VS_II1138 6c007be789b3dd1df203a120434cf3de 668 SUPERFAMILY SSF50249 186 563 7.03E-107 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_II1138 6c007be789b3dd1df203a120434cf3de 668 Pfam PF08206 Ribonuclease B OB domain 24 80 2.7E-16 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VS_II1138 6c007be789b3dd1df203a120434cf3de 668 Gene3D G3DSA:2.40.50.140 1 81 1.6E-27 T 14-10-2018 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 Gene3D G3DSA:2.40.50.140 566 651 2.3E-34 T 14-10-2018 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 6.4E-184 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 SMART SM00357 23 79 1.9E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_II1138 6c007be789b3dd1df203a120434cf3de 668 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.122 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VS_2492 e4790dc28f9f79a5e0279ca2661dadab 98 SUPERFAMILY SSF75471 1 93 3.01E-28 T 14-10-2018 IPR035920 YhbY-like superfamily VS_2492 e4790dc28f9f79a5e0279ca2661dadab 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.6E-35 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 VS_2492 e4790dc28f9f79a5e0279ca2661dadab 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 3.0E-41 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VS_2492 e4790dc28f9f79a5e0279ca2661dadab 98 Gene3D G3DSA:3.30.110.60 1 98 8.5E-35 T 14-10-2018 IPR035920 YhbY-like superfamily VS_2492 e4790dc28f9f79a5e0279ca2661dadab 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.5E-19 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VS_2492 e4790dc28f9f79a5e0279ca2661dadab 98 SMART SM01103 3 86 1.6E-40 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VS_II0796 a05e902edaad53228137b75842ec1018 351 SUPERFAMILY SSF111369 48 267 6.02E-29 T 14-10-2018 VS_II0796 a05e902edaad53228137b75842ec1018 351 Gene3D G3DSA:2.40.420.20 270 343 1.8E-60 T 14-10-2018 VS_II0796 a05e902edaad53228137b75842ec1018 351 Gene3D G3DSA:2.40.30.170 45 269 1.8E-60 T 14-10-2018 VS_II0796 a05e902edaad53228137b75842ec1018 351 Gene3D G3DSA:1.10.287.470 91 150 1.8E-60 T 14-10-2018 VS_II0796 a05e902edaad53228137b75842ec1018 351 Gene3D G3DSA:2.40.50.100 57 189 1.8E-60 T 14-10-2018 VS_II0796 a05e902edaad53228137b75842ec1018 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 260 1.7E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II0796 a05e902edaad53228137b75842ec1018 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 345 3.3E-55 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_1525 13a03ad357bbaf7f4691fcd838771739 410 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 394 4.8E-123 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VS_1525 13a03ad357bbaf7f4691fcd838771739 410 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1525 13a03ad357bbaf7f4691fcd838771739 410 Pfam PF00005 ABC transporter 45 193 8.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1525 13a03ad357bbaf7f4691fcd838771739 410 SUPERFAMILY SSF54631 275 398 6.2E-10 T 14-10-2018 VS_1525 13a03ad357bbaf7f4691fcd838771739 410 SUPERFAMILY SSF52540 39 265 1.69E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1525 13a03ad357bbaf7f4691fcd838771739 410 SMART SM00382 54 243 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1525 13a03ad357bbaf7f4691fcd838771739 410 Gene3D G3DSA:3.40.50.300 33 270 5.1E-68 T 14-10-2018 VS_1525 13a03ad357bbaf7f4691fcd838771739 410 Gene3D G3DSA:3.10.580.10 274 394 3.1E-6 T 14-10-2018 VS_3133 5032aa4d2cd71d40c922fc80eb1d967f 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 7.0E-69 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 VS_3133 5032aa4d2cd71d40c922fc80eb1d967f 217 Pfam PF03006 Haemolysin-III related 13 207 2.3E-37 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VS_0033 cb250dad4ee53e2123e879bac059e642 304 SUPERFAMILY SSF55681 8 293 1.49E-132 T 14-10-2018 VS_0033 cb250dad4ee53e2123e879bac059e642 304 Gene3D G3DSA:1.20.58.180 216 298 2.8E-34 T 14-10-2018 VS_0033 cb250dad4ee53e2123e879bac059e642 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.6E-169 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.409 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 3.6E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 3.6E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 3.6E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 3.6E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 3.6E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 3.6E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0033 cb250dad4ee53e2123e879bac059e642 304 Gene3D G3DSA:3.30.930.10 1 215 1.1E-109 T 14-10-2018 VS_0033 cb250dad4ee53e2123e879bac059e642 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 1.7E-148 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 Gene3D G3DSA:1.10.1020.10 57 156 1.1E-80 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 PIRSF PIRSF000398 1 275 1.6E-69 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 Gene3D G3DSA:3.40.50.150 7 239 1.1E-80 T 14-10-2018 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 SUPERFAMILY SSF53335 5 268 9.14E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 4.3E-91 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.3E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VS_2869 1276f4d85c8c83a425c63471bbb4c013 286 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.1E-66 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 SMART SM01185 69 124 3.3E-11 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 6.4E-18 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 Gene3D G3DSA:2.30.30.30 1 65 5.5E-11 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 8.4E-85 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 PIRSF PIRSF005901 1 189 5.9E-58 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 SMART SM00841 132 187 2.4E-27 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 SUPERFAMILY SSF50249 67 130 1.2E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 SUPERFAMILY SSF50249 132 188 1.22E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 Gene3D G3DSA:2.40.50.140 67 130 2.1E-13 T 14-10-2018 VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 121 3.9E-11 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.558 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 SUPERFAMILY SSF50104 1 64 1.32E-10 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.3E-21 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VS_1959 65f2e67df621a94b97935f6a80b1d25c 189 Gene3D G3DSA:2.40.50.140 131 188 9.7E-22 T 14-10-2018 VS_0594 1e5be5515f556755a9ef6a86b33b599f 301 Gene3D G3DSA:3.40.190.10 98 297 1.6E-54 T 14-10-2018 VS_0594 1e5be5515f556755a9ef6a86b33b599f 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0594 1e5be5515f556755a9ef6a86b33b599f 301 SUPERFAMILY SSF53850 96 300 3.62E-35 T 14-10-2018 VS_0594 1e5be5515f556755a9ef6a86b33b599f 301 Gene3D G3DSA:1.10.10.10 2 89 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0594 1e5be5515f556755a9ef6a86b33b599f 301 Gene3D G3DSA:3.40.190.10 168 269 1.6E-54 T 14-10-2018 VS_0594 1e5be5515f556755a9ef6a86b33b599f 301 SUPERFAMILY SSF46785 4 117 1.78E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0594 1e5be5515f556755a9ef6a86b33b599f 301 Pfam PF03466 LysR substrate binding domain 96 299 3.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2470 ed0b4359758d87a306e7f1fa1454171e 167 SUPERFAMILY SSF55729 1 128 2.44E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2470 ed0b4359758d87a306e7f1fa1454171e 167 Pfam PF00583 Acetyltransferase (GNAT) family 40 122 1.2E-8 T 14-10-2018 IPR000182 GNAT domain VS_2470 ed0b4359758d87a306e7f1fa1454171e 167 Gene3D G3DSA:3.40.630.30 1 167 2.1E-45 T 14-10-2018 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 2.0E-126 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 SUPERFAMILY SSF51717 15 208 7.3E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 SUPERFAMILY SSF56014 265 354 8.11E-12 T 14-10-2018 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 PIRSF PIRSF004640 1 364 1.1E-146 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 Gene3D G3DSA:3.20.20.20 1 261 1.7E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.826 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 Pfam PF04551 GcpE protein 14 354 2.9E-131 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VS_0619 c62888b29da8f294312a7b413fd4cbb2 373 Gene3D G3DSA:3.30.413.10 262 361 7.0E-25 T 14-10-2018 VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 Gene3D G3DSA:1.10.530.10 315 476 3.8E-34 T 14-10-2018 VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 Gene3D G3DSA:3.40.190.10 38 289 2.5E-66 T 14-10-2018 VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 4 494 47.878 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 SMART SM00062 44 294 9.1E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 Pfam PF01464 Transglycosylase SLT domain 324 427 6.4E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 SUPERFAMILY SSF53955 271 476 2.33E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 Gene3D G3DSA:3.40.190.10 129 250 2.5E-66 T 14-10-2018 VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 293 7.9E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 SUPERFAMILY SSF53850 45 293 1.25E-32 T 14-10-2018 VS_0663 06b3f022f1a8f0ec4462ba5917a2e5ef 523 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 335 363 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VS_2858 09379f49f43b7a86c20d9babaeef87f5 263 Gene3D G3DSA:3.10.180.50 3 239 1.7E-90 T 14-10-2018 VS_2858 09379f49f43b7a86c20d9babaeef87f5 263 SMART SM01150 3 262 9.1E-113 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VS_2858 09379f49f43b7a86c20d9babaeef87f5 263 Pfam PF07063 Domain of unknown function (DUF1338) 137 261 2.4E-27 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VS_2858 09379f49f43b7a86c20d9babaeef87f5 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 116 2.9E-20 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VS_0022 148ab03ca35b0060b13b848adf85a781 427 Pfam PF00437 Type II/IV secretion system protein 71 347 2.8E-80 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_0022 148ab03ca35b0060b13b848adf85a781 427 Gene3D G3DSA:3.40.50.300 169 424 1.0E-71 T 14-10-2018 VS_0022 148ab03ca35b0060b13b848adf85a781 427 Gene3D G3DSA:3.30.450.380 1 166 4.4E-41 T 14-10-2018 VS_0022 148ab03ca35b0060b13b848adf85a781 427 SUPERFAMILY SSF52540 57 354 9.07E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 SUPERFAMILY SSF50715 340 548 1.31E-80 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.664 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Gene3D G3DSA:3.90.800.10 101 209 7.7E-105 T 14-10-2018 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Gene3D G3DSA:1.10.1160.10 261 339 4.5E-35 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Gene3D G3DSA:2.40.240.10 348 463 8.6E-48 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 3.8E-295 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 6.0E-63 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Gene3D G3DSA:3.40.50.620 30 247 7.7E-105 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Gene3D G3DSA:2.40.240.10 464 548 1.7E-33 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.1E-124 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 SUPERFAMILY SSF52374 11 337 7.19E-100 T 14-10-2018 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2259 f89e6ca4406b9f32f7c4f8e5a5060a1c 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_II0232 ec2dc51378810649e653eb817575180b 310 Gene3D G3DSA:3.40.190.10 172 265 2.3E-13 T 14-10-2018 VS_II0232 ec2dc51378810649e653eb817575180b 310 SUPERFAMILY SSF46785 6 81 2.52E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0232 ec2dc51378810649e653eb817575180b 310 SUPERFAMILY SSF53850 89 301 6.52E-15 T 14-10-2018 VS_II0232 ec2dc51378810649e653eb817575180b 310 Pfam PF03466 LysR substrate binding domain 120 275 9.7E-9 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0232 ec2dc51378810649e653eb817575180b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0232 ec2dc51378810649e653eb817575180b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0232 ec2dc51378810649e653eb817575180b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0232 ec2dc51378810649e653eb817575180b 310 Gene3D G3DSA:1.10.10.10 1 89 2.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0232 ec2dc51378810649e653eb817575180b 310 Gene3D G3DSA:3.40.190.10 91 171 2.3E-13 T 14-10-2018 VS_II0232 ec2dc51378810649e653eb817575180b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.5E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0314 969b94ba770e3c4b077186efcd4a0d99 89 SUPERFAMILY SSF52794 1 87 2.62E-21 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II0314 969b94ba770e3c4b077186efcd4a0d99 89 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 86 5.3E-19 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_II0314 969b94ba770e3c4b077186efcd4a0d99 89 Gene3D G3DSA:3.40.50.2300 1 89 2.7E-24 T 14-10-2018 VS_0387 54d390e765daa8aeaa0e7689edb9b31c 602 Gene3D G3DSA:3.40.50.12780 1 313 8.4E-51 T 14-10-2018 VS_0387 54d390e765daa8aeaa0e7689edb9b31c 602 Gene3D G3DSA:3.40.50.12780 314 457 7.8E-34 T 14-10-2018 VS_0387 54d390e765daa8aeaa0e7689edb9b31c 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site VS_0387 54d390e765daa8aeaa0e7689edb9b31c 602 SUPERFAMILY SSF56801 7 596 3.66E-111 T 14-10-2018 VS_0387 54d390e765daa8aeaa0e7689edb9b31c 602 Pfam PF00501 AMP-binding enzyme 13 466 5.3E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 SUPERFAMILY SSF63380 106 273 2.17E-35 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 243 252 8.2E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 210 217 8.2E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 374 382 8.2E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 296 8.2E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 Gene3D G3DSA:3.40.50.80 276 394 3.1E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 SUPERFAMILY SSF52343 259 403 8.77E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 PIRSF PIRSF000044 1 408 4.5E-215 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 Gene3D G3DSA:3.10.20.30 35 126 3.4E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 7.1E-222 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 Pfam PF00970 Oxidoreductase FAD-binding domain 203 267 1.9E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 4.0E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 Gene3D G3DSA:2.40.30.10 127 265 1.7E-50 T 14-10-2018 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 116 1.6E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 61.197 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VS_0698 d2b999128853aa4e0f9ad6217bd215eb 408 SUPERFAMILY SSF54292 39 123 9.13E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_II0411 37ef70f01cf55da52d6047875c88710c 333 SMART SM00354 7 77 9.5E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0411 37ef70f01cf55da52d6047875c88710c 333 Gene3D G3DSA:1.10.260.40 2 64 1.6E-17 T 14-10-2018 VS_II0411 37ef70f01cf55da52d6047875c88710c 333 SUPERFAMILY SSF47413 6 65 5.25E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II0411 37ef70f01cf55da52d6047875c88710c 333 SUPERFAMILY SSF53822 64 316 7.07E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II0411 37ef70f01cf55da52d6047875c88710c 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 66 311 1.3E-24 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VS_II0411 37ef70f01cf55da52d6047875c88710c 333 Gene3D G3DSA:3.40.50.2300 69 310 4.6E-64 T 14-10-2018 VS_II0411 37ef70f01cf55da52d6047875c88710c 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 6.2E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0411 37ef70f01cf55da52d6047875c88710c 333 Gene3D G3DSA:3.40.50.2300 163 294 4.6E-64 T 14-10-2018 VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 Gene3D G3DSA:3.40.50.300 4 454 1.6E-186 T 14-10-2018 VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 1.2E-238 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 SUPERFAMILY SSF52540 4 580 4.46E-214 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 Gene3D G3DSA:3.10.410.10 469 558 1.1E-28 T 14-10-2018 VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.212 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VS_II0809 4862b11d174dda003af0c5530f7c61d5 582 Gene3D G3DSA:3.30.1510.10 129 264 1.6E-186 T 14-10-2018 VS_II1502 81b2703a41962da874a34c964485d4ee 309 Gene3D G3DSA:3.40.190.290 104 299 1.0E-37 T 14-10-2018 VS_II1502 81b2703a41962da874a34c964485d4ee 309 Gene3D G3DSA:1.10.10.10 16 103 5.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1502 81b2703a41962da874a34c964485d4ee 309 Pfam PF03466 LysR substrate binding domain 102 299 6.9E-28 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1502 81b2703a41962da874a34c964485d4ee 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 2.6E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1502 81b2703a41962da874a34c964485d4ee 309 SUPERFAMILY SSF46785 16 96 2.37E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1502 81b2703a41962da874a34c964485d4ee 309 SUPERFAMILY SSF53850 103 303 2.71E-29 T 14-10-2018 VS_1571 b3f98ee6cd0207ab5962cb83db0fa4ab 199 Gene3D G3DSA:3.20.80.10 42 199 1.5E-45 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_1571 b3f98ee6cd0207ab5962cb83db0fa4ab 199 Pfam PF14526 Integron-associated effector binding protein 53 198 3.4E-21 T 14-10-2018 IPR029441 Integron-associated effector binding protein VS_1571 b3f98ee6cd0207ab5962cb83db0fa4ab 199 SUPERFAMILY SSF55136 52 198 5.75E-14 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_1571 b3f98ee6cd0207ab5962cb83db0fa4ab 199 SMART SM00871 51 199 1.7E-21 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VS_II0422 3bc3c313c619e55c82ccd9702944b159 594 Pfam PF00664 ABC transporter transmembrane region 25 288 6.4E-53 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0422 3bc3c313c619e55c82ccd9702944b159 594 Gene3D G3DSA:1.20.1560.10 4 322 3.4E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0422 3bc3c313c619e55c82ccd9702944b159 594 Gene3D G3DSA:3.40.50.300 332 584 8.9E-76 T 14-10-2018 VS_II0422 3bc3c313c619e55c82ccd9702944b159 594 SUPERFAMILY SSF90123 11 324 1.44E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0422 3bc3c313c619e55c82ccd9702944b159 594 Pfam PF00005 ABC transporter 363 512 1.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0422 3bc3c313c619e55c82ccd9702944b159 594 SMART SM00382 372 558 1.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0422 3bc3c313c619e55c82ccd9702944b159 594 SUPERFAMILY SSF52540 343 580 7.32E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0331 9f948810499a5d91088492bd08c877b5 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_0331 9f948810499a5d91088492bd08c877b5 574 SUPERFAMILY SSF52540 174 559 3.38E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0331 9f948810499a5d91088492bd08c877b5 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 1.7E-22 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VS_0331 9f948810499a5d91088492bd08c877b5 574 Gene3D G3DSA:3.30.450.90 148 286 5.3E-44 T 14-10-2018 VS_0331 9f948810499a5d91088492bd08c877b5 574 SUPERFAMILY SSF160246 2 145 7.32E-39 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VS_0331 9f948810499a5d91088492bd08c877b5 574 Pfam PF00437 Type II/IV secretion system protein 191 453 2.8E-76 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_0331 9f948810499a5d91088492bd08c877b5 574 Gene3D G3DSA:3.30.300.160 63 145 1.6E-6 T 14-10-2018 VS_0331 9f948810499a5d91088492bd08c877b5 574 SMART SM00382 314 435 3.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0331 9f948810499a5d91088492bd08c877b5 574 Gene3D G3DSA:3.40.50.300 289 565 5.1E-98 T 14-10-2018 VS_2424 3c1095cb09a9f5128a6a5a86a6fa38f8 348 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 3.0E-66 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VS_2424 3c1095cb09a9f5128a6a5a86a6fa38f8 348 SUPERFAMILY SSF53187 22 319 4.3E-76 T 14-10-2018 VS_2424 3c1095cb09a9f5128a6a5a86a6fa38f8 348 PIRSF PIRSF039012 6 325 2.1E-93 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VS_2424 3c1095cb09a9f5128a6a5a86a6fa38f8 348 Gene3D G3DSA:3.40.630.10 16 320 4.5E-93 T 14-10-2018 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 Pfam PF00294 pfkB family carbohydrate kinase 1 294 4.6E-74 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 SUPERFAMILY SSF53613 1 302 7.95E-87 T 14-10-2018 IPR029056 Ribokinase-like VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 298 1.1E-109 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 PRINTS PR00990 Ribokinase signature 173 188 1.8E-34 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 PRINTS PR00990 Ribokinase signature 33 52 1.8E-34 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 PRINTS PR00990 Ribokinase signature 6 27 1.8E-34 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 PRINTS PR00990 Ribokinase signature 105 118 1.8E-34 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 PRINTS PR00990 Ribokinase signature 217 228 1.8E-34 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.006 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 Gene3D G3DSA:3.40.1190.20 1 300 6.4E-103 T 14-10-2018 IPR029056 Ribokinase-like VS_II0944 e7350ab9d1469083248ea13b5fc77d33 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 Pfam PF03466 LysR substrate binding domain 88 294 9.4E-32 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 Gene3D G3DSA:3.40.190.290 91 294 4.1E-57 T 14-10-2018 VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 Gene3D G3DSA:1.10.10.10 1 88 3.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 SUPERFAMILY SSF53850 89 296 6.52E-35 T 14-10-2018 VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0848 1fe09113f22e9cb0d4ac6d62812b9bc7 300 SUPERFAMILY SSF46785 1 84 4.95E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1468 c6fa3fc3ebf0f45f86e80ee6494c0859 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 45 121 9.8E-10 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VS_II1468 c6fa3fc3ebf0f45f86e80ee6494c0859 138 SUPERFAMILY SSF51316 14 137 6.59E-32 T 14-10-2018 IPR011057 Mss4-like superfamily VS_II1468 c6fa3fc3ebf0f45f86e80ee6494c0859 138 Gene3D G3DSA:2.170.150.70 21 138 1.1E-36 T 14-10-2018 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 SUPERFAMILY SSF74731 2 115 5.62E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-52 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 Gene3D G3DSA:1.10.1900.20 56 117 9.4E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.6E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.6E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.6E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 Gene3D G3DSA:1.10.720.90 2 55 3.7E-25 T 14-10-2018 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 14-10-2018 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.654 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1231 bfbc00d36d69d0d178247dd8cbcb9118 117 Pfam PF00453 Ribosomal protein L20 3 108 5.0E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_II0556 cf118176905550edb9779d70a576697d 343 Gene3D G3DSA:3.40.50.720 128 309 1.1E-128 T 14-10-2018 VS_II0556 cf118176905550edb9779d70a576697d 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 2.0E-41 T 14-10-2018 VS_II0556 cf118176905550edb9779d70a576697d 343 Pfam PF00107 Zinc-binding dehydrogenase 159 292 1.2E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VS_II0556 cf118176905550edb9779d70a576697d 343 SUPERFAMILY SSF50129 6 144 6.06E-42 T 14-10-2018 IPR011032 GroES-like superfamily VS_II0556 cf118176905550edb9779d70a576697d 343 SUPERFAMILY SSF51735 125 304 1.63E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0556 cf118176905550edb9779d70a576697d 343 SMART SM00829 20 337 8.6E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VS_II0556 cf118176905550edb9779d70a576697d 343 Gene3D G3DSA:3.90.180.10 17 337 1.1E-128 T 14-10-2018 VS_1479 a5784afe8b476a22cec79d717eecdfaf 288 Gene3D G3DSA:3.30.70.270 118 264 1.6E-21 T 14-10-2018 VS_1479 a5784afe8b476a22cec79d717eecdfaf 288 Pfam PF00990 Diguanylate cyclase, GGDEF domain 131 260 9.6E-17 T 14-10-2018 IPR000160 GGDEF domain VS_1479 a5784afe8b476a22cec79d717eecdfaf 288 SMART SM00267 118 269 1.2E-11 T 14-10-2018 IPR000160 GGDEF domain VS_1479 a5784afe8b476a22cec79d717eecdfaf 288 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 127 260 3.7E-16 T 14-10-2018 IPR000160 GGDEF domain VS_1479 a5784afe8b476a22cec79d717eecdfaf 288 SUPERFAMILY SSF55073 134 260 5.49E-21 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 PIRSF PIRSF000164 10 336 4.1E-103 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.9E-89 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.2E-148 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 Gene3D G3DSA:3.20.20.70 2 336 1.7E-142 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.088 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VS_1422 86142ad506310f8e07047f7f6dc1a22c 336 SUPERFAMILY SSF51395 1 336 4.0E-106 T 14-10-2018 VS_2512 645f60bc2b62ad4b38545a41c3284000 294 Gene3D G3DSA:3.30.420.40 115 261 3.4E-69 T 14-10-2018 VS_2512 645f60bc2b62ad4b38545a41c3284000 294 SUPERFAMILY SSF53067 114 283 1.2E-44 T 14-10-2018 VS_2512 645f60bc2b62ad4b38545a41c3284000 294 Gene3D G3DSA:3.30.420.40 4 114 3.4E-69 T 14-10-2018 VS_2512 645f60bc2b62ad4b38545a41c3284000 294 SUPERFAMILY SSF53067 2 111 3.15E-24 T 14-10-2018 VS_2512 645f60bc2b62ad4b38545a41c3284000 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 2.0E-46 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 2.4E-61 T 14-10-2018 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 2.4E-61 T 14-10-2018 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 2.4E-61 T 14-10-2018 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 2.4E-61 T 14-10-2018 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 2.4E-61 T 14-10-2018 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 2.4E-61 T 14-10-2018 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 2.4E-61 T 14-10-2018 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 Pfam PF00696 Amino acid kinase family 5 278 2.4E-28 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 SUPERFAMILY SSF53633 4 300 2.75E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 PIRSF PIRSF000723 2 302 3.9E-113 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 Gene3D G3DSA:3.40.1160.10 1 303 2.7E-113 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2925 bc42d65e11d2dbf801a55a2612b6a76f 303 TIGRFAM TIGR00746 arcC: carbamate kinase 5 302 5.2E-119 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VS_II0673 881a724fd1b35952df313ab13e90b03c 157 Gene3D G3DSA:3.40.50.1010 1 157 7.5E-57 T 14-10-2018 VS_II0673 881a724fd1b35952df313ab13e90b03c 157 Pfam PF01936 NYN domain 4 151 7.2E-40 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type VS_2082 b95ae9ec3e0d9342824dd71d5f7d47f9 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 4.0E-109 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VS_2082 b95ae9ec3e0d9342824dd71d5f7d47f9 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2082 b95ae9ec3e0d9342824dd71d5f7d47f9 252 Gene3D G3DSA:3.40.50.1580 1 252 9.6E-79 T 14-10-2018 VS_2082 b95ae9ec3e0d9342824dd71d5f7d47f9 252 Pfam PF01048 Phosphorylase superfamily 20 243 2.9E-38 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VS_2082 b95ae9ec3e0d9342824dd71d5f7d47f9 252 SUPERFAMILY SSF53167 6 249 9.56E-71 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VS_2782 889863702ce6c5e0be7460e41d0afef2 230 Gene3D G3DSA:3.40.50.300 1 229 2.0E-57 T 14-10-2018 VS_2782 889863702ce6c5e0be7460e41d0afef2 230 SMART SM00382 28 224 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2782 889863702ce6c5e0be7460e41d0afef2 230 Pfam PF00005 ABC transporter 23 176 3.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2782 889863702ce6c5e0be7460e41d0afef2 230 SUPERFAMILY SSF52540 23 221 7.14E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1956 aa7c0c9e20e169bb131305f030a51495 214 Gene3D G3DSA:3.40.50.12740 2 209 1.7E-58 T 14-10-2018 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 SUPERFAMILY SSF46894 135 210 9.52E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 SUPERFAMILY SSF52172 2 132 3.84E-33 T 14-10-2018 IPR011006 CheY-like superfamily VS_1956 aa7c0c9e20e169bb131305f030a51495 214 SMART SM00448 2 115 1.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 Pfam PF00072 Response regulator receiver domain 4 116 8.5E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1956 aa7c0c9e20e169bb131305f030a51495 214 SMART SM00421 146 203 1.7E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1539 ce020062ada62685e2aa57f2ca978a26 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 367 3.2E-62 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_1539 ce020062ada62685e2aa57f2ca978a26 377 Gene3D G3DSA:2.40.50.100 77 223 1.3E-61 T 14-10-2018 VS_1539 ce020062ada62685e2aa57f2ca978a26 377 Gene3D G3DSA:2.40.30.170 65 298 1.3E-61 T 14-10-2018 VS_1539 ce020062ada62685e2aa57f2ca978a26 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 247 2.6E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_1539 ce020062ada62685e2aa57f2ca978a26 377 Gene3D G3DSA:1.10.287.470 111 176 1.3E-61 T 14-10-2018 VS_1539 ce020062ada62685e2aa57f2ca978a26 377 Gene3D G3DSA:2.40.420.20 299 367 1.3E-61 T 14-10-2018 VS_1539 ce020062ada62685e2aa57f2ca978a26 377 SUPERFAMILY SSF111369 67 243 1.01E-22 T 14-10-2018 VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 Gene3D G3DSA:3.30.70.920 64 159 3.2E-24 T 14-10-2018 VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 14-10-2018 VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 2.7E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 Gene3D G3DSA:1.10.10.10 1 63 5.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 SUPERFAMILY SSF54909 74 158 1.34E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 SUPERFAMILY SSF46785 12 70 1.95E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2047 55ddee4a95a1efad1af4c81007ce72ef 164 SMART SM00344 12 121 7.3E-55 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.40.190.10 111 205 1.6E-14 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.40.190.10 359 455 2.3E-30 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 971 981 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1006 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1012 1025 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 953 967 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SMART SM00387 912 1028 2.4E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:1.10.287.130 776 863 1.2E-23 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:1.20.120.160 1315 1429 2.0E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 800 865 1.7E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.30.450.20 653 775 7.4E-6 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 2.3E-11 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF53850 22 245 1.74E-14 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF55785 689 789 1.56E-6 T 14-10-2018 IPR035965 PAS domain superfamily VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF47226 1272 1415 1.57E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Pfam PF13188 PAS domain 551 590 1.8E-5 T 14-10-2018 IPR000014 PAS domain VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Pfam PF00072 Response regulator receiver domain 1175 1284 2.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF52172 1172 1294 2.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 913 1027 1.9E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SMART SM00062 26 246 5.9E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SMART SM00062 274 496 0.0045 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SMART SM00448 1173 1289 2.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.40.190.10 265 492 2.3E-30 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF47384 785 866 4.51E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.30.565.10 864 1032 1.7E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SMART SM00388 800 865 3.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF55785 535 587 3.4E-8 T 14-10-2018 IPR035965 PAS domain superfamily VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.30.450.20 536 648 6.0E-6 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.40.50.2300 1153 1296 3.1E-36 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 277 494 5.8E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF53850 276 497 1.52E-20 T 14-10-2018 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SUPERFAMILY SSF55874 854 1028 5.37E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SMART SM00091 662 736 68.0 T 14-10-2018 IPR000014 PAS domain VS_1155 3015e066c48f9aad286c40250f0ab881 1430 SMART SM00091 550 620 0.021 T 14-10-2018 IPR000014 PAS domain VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Pfam PF01627 Hpt domain 1336 1414 1.2E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_1155 3015e066c48f9aad286c40250f0ab881 1430 Gene3D G3DSA:3.40.190.10 23 242 1.6E-14 T 14-10-2018 VS_2998 01bb248b380f5ae91e72bf9226bd4446 586 Gene3D G3DSA:2.40.170.20 154 586 8.4E-116 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_2998 01bb248b380f5ae91e72bf9226bd4446 586 Gene3D G3DSA:2.170.130.10 24 153 9.9E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_2998 01bb248b380f5ae91e72bf9226bd4446 586 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 2.7E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_2998 01bb248b380f5ae91e72bf9226bd4446 586 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 14-10-2018 IPR010916 TonB box, conserved site VS_2998 01bb248b380f5ae91e72bf9226bd4446 586 Pfam PF00593 TonB dependent receptor 194 584 5.6E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_2998 01bb248b380f5ae91e72bf9226bd4446 586 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 586 34.107 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VS_2998 01bb248b380f5ae91e72bf9226bd4446 586 SUPERFAMILY SSF56935 29 586 1.93E-108 T 14-10-2018 VS_0859 320d430cf3b4ab07f2ca97a77cd053ca 261 PRINTS PR01805 VacJ lipoprotein signature 116 133 4.0E-30 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VS_0859 320d430cf3b4ab07f2ca97a77cd053ca 261 PRINTS PR01805 VacJ lipoprotein signature 65 81 4.0E-30 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VS_0859 320d430cf3b4ab07f2ca97a77cd053ca 261 PRINTS PR01805 VacJ lipoprotein signature 153 170 4.0E-30 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VS_0859 320d430cf3b4ab07f2ca97a77cd053ca 261 PRINTS PR01805 VacJ lipoprotein signature 47 60 4.0E-30 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VS_0859 320d430cf3b4ab07f2ca97a77cd053ca 261 Pfam PF04333 MlaA lipoprotein 46 237 8.6E-63 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VS_0173 a8921c10b3607ed1156abfec841d4147 290 ProSitePatterns PS01229 Hypothetical cof family signature 2. 227 249 - T 14-10-2018 VS_0173 a8921c10b3607ed1156abfec841d4147 290 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 16 246 2.7E-22 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VS_0173 a8921c10b3607ed1156abfec841d4147 290 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 16 273 6.0E-54 T 14-10-2018 IPR000150 Cof family GO:0016787 VS_0173 a8921c10b3607ed1156abfec841d4147 290 Gene3D G3DSA:3.40.50.1000 15 273 2.1E-58 T 14-10-2018 IPR023214 HAD superfamily VS_0173 a8921c10b3607ed1156abfec841d4147 290 Pfam PF08282 haloacid dehalogenase-like hydrolase 16 273 1.0E-57 T 14-10-2018 VS_0173 a8921c10b3607ed1156abfec841d4147 290 SUPERFAMILY SSF56784 9 274 4.14E-59 T 14-10-2018 IPR036412 HAD-like superfamily VS_0173 a8921c10b3607ed1156abfec841d4147 290 ProSitePatterns PS01228 Hypothetical cof family signature 1. 15 26 - T 14-10-2018 VS_0173 a8921c10b3607ed1156abfec841d4147 290 Gene3D G3DSA:3.30.1240.10 94 202 2.1E-58 T 14-10-2018 VS_0254 8b34617963f7c462bbb25f9889e3a1ef 351 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 338 36.977 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VS_0254 8b34617963f7c462bbb25f9889e3a1ef 351 Pfam PF03193 RsgA GTPase 99 274 1.4E-56 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VS_0254 8b34617963f7c462bbb25f9889e3a1ef 351 SUPERFAMILY SSF52540 113 334 1.15E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0254 8b34617963f7c462bbb25f9889e3a1ef 351 Gene3D G3DSA:3.40.50.300 102 273 1.1E-48 T 14-10-2018 VS_0254 8b34617963f7c462bbb25f9889e3a1ef 351 Gene3D G3DSA:2.40.50.140 35 101 2.5E-21 T 14-10-2018 VS_0254 8b34617963f7c462bbb25f9889e3a1ef 351 Gene3D G3DSA:1.10.40.50 274 348 1.6E-24 T 14-10-2018 VS_0254 8b34617963f7c462bbb25f9889e3a1ef 351 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 332 2.0E-86 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VS_0873 55af95eb4c2bf519c355959c899f2747 242 SUPERFAMILY SSF46894 138 235 2.27E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_0873 55af95eb4c2bf519c355959c899f2747 242 Gene3D G3DSA:3.40.50.2300 1 128 2.6E-38 T 14-10-2018 VS_0873 55af95eb4c2bf519c355959c899f2747 242 SUPERFAMILY SSF52172 2 128 2.56E-42 T 14-10-2018 IPR011006 CheY-like superfamily VS_0873 55af95eb4c2bf519c355959c899f2747 242 Pfam PF00072 Response regulator receiver domain 7 117 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0873 55af95eb4c2bf519c355959c899f2747 242 SMART SM00448 5 116 5.6E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0873 55af95eb4c2bf519c355959c899f2747 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 8.7E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0873 55af95eb4c2bf519c355959c899f2747 242 SMART SM00862 158 234 1.3E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0873 55af95eb4c2bf519c355959c899f2747 242 Gene3D G3DSA:1.10.10.10 129 238 5.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 Gene3D G3DSA:3.40.630.10 1 281 1.3E-129 T 14-10-2018 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 SUPERFAMILY SSF53187 2 280 2.51E-114 T 14-10-2018 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 PRINTS PR00481 Cytosol aminopeptidase signature 70 91 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 PRINTS PR00481 Cytosol aminopeptidase signature 48 65 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 PRINTS PR00481 Cytosol aminopeptidase signature 129 149 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 PRINTS PR00481 Cytosol aminopeptidase signature 157 172 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 PRINTS PR00481 Cytosol aminopeptidase signature 107 128 1.1E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 133 140 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VS_2730 4fdd4caedb54e1bc4aa5226af72de58e 290 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 2 273 1.0E-114 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VS_II1411 823917b110ced90e84799f7b7eb490e3 290 Gene3D G3DSA:2.60.120.10 18 284 6.2E-85 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1411 823917b110ced90e84799f7b7eb490e3 290 Pfam PF02678 Pirin 31 121 4.4E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VS_II1411 823917b110ced90e84799f7b7eb490e3 290 Gene3D G3DSA:2.60.120.10 143 257 6.2E-85 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1411 823917b110ced90e84799f7b7eb490e3 290 PIRSF PIRSF006232 3 290 5.3E-81 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VS_II1411 823917b110ced90e84799f7b7eb490e3 290 Pfam PF05726 Pirin C-terminal cupin domain 189 287 4.7E-27 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 VS_II1411 823917b110ced90e84799f7b7eb490e3 290 SUPERFAMILY SSF51182 6 288 7.23E-73 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_2591 e157f6b262553c794f434974a1ae420a 427 Gene3D G3DSA:1.20.58.370 67 159 6.4E-7 T 14-10-2018 IPR035277 MalF, N-terminal VS_2591 e157f6b262553c794f434974a1ae420a 427 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 211 408 2.1E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2591 e157f6b262553c794f434974a1ae420a 427 SUPERFAMILY SSF160964 86 180 2.62E-13 T 14-10-2018 VS_2591 e157f6b262553c794f434974a1ae420a 427 Gene3D G3DSA:1.10.3720.10 171 424 2.7E-62 T 14-10-2018 IPR035906 MetI-like superfamily VS_2591 e157f6b262553c794f434974a1ae420a 427 SUPERFAMILY SSF161098 175 408 9.94E-55 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1097 66199e0a6b04e4000ccdd70b1376842b 224 SUPERFAMILY SSF52833 1 78 5.61E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II1097 66199e0a6b04e4000ccdd70b1376842b 224 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 191 3.8E-12 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VS_II1097 66199e0a6b04e4000ccdd70b1376842b 224 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 73 4.1E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_II1097 66199e0a6b04e4000ccdd70b1376842b 224 SUPERFAMILY SSF47616 83 198 1.12E-30 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_II1097 66199e0a6b04e4000ccdd70b1376842b 224 Gene3D G3DSA:3.40.30.10 1 81 1.2E-27 T 14-10-2018 VS_II1097 66199e0a6b04e4000ccdd70b1376842b 224 Gene3D G3DSA:1.20.1050.10 82 218 4.7E-39 T 14-10-2018 VS_II0797 47d3ac4c24183048c6182d265180f30b 362 Pfam PF13533 Biotin-lipoyl like 74 117 3.4E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_II0797 47d3ac4c24183048c6182d265180f30b 362 Gene3D G3DSA:2.40.50.100 70 202 9.7E-63 T 14-10-2018 VS_II0797 47d3ac4c24183048c6182d265180f30b 362 Gene3D G3DSA:2.40.30.170 56 283 9.7E-63 T 14-10-2018 VS_II0797 47d3ac4c24183048c6182d265180f30b 362 Pfam PF13437 HlyD family secretion protein 167 273 8.3E-8 T 14-10-2018 VS_II0797 47d3ac4c24183048c6182d265180f30b 362 SUPERFAMILY SSF111369 62 281 1.96E-26 T 14-10-2018 VS_II0797 47d3ac4c24183048c6182d265180f30b 362 Gene3D G3DSA:1.10.287.470 104 163 9.7E-63 T 14-10-2018 VS_II0797 47d3ac4c24183048c6182d265180f30b 362 Gene3D G3DSA:2.40.420.20 284 353 9.7E-63 T 14-10-2018 VS_II0797 47d3ac4c24183048c6182d265180f30b 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 356 2.5E-57 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_3090 422f10025b5bcb9e4040cb144293a58b 440 Gene3D G3DSA:1.20.1720.10 55 428 1.2E-90 T 14-10-2018 VS_3090 422f10025b5bcb9e4040cb144293a58b 440 Pfam PF07690 Major Facilitator Superfamily 59 395 2.1E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_3090 422f10025b5bcb9e4040cb144293a58b 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 108 124 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VS_3090 422f10025b5bcb9e4040cb144293a58b 440 SUPERFAMILY SSF103473 43 425 5.23E-60 T 14-10-2018 IPR036259 MFS transporter superfamily VS_3090 422f10025b5bcb9e4040cb144293a58b 440 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 51 417 2.4E-67 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.4E-104 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 SUPERFAMILY SSF56655 6 271 1.44E-77 T 14-10-2018 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 Gene3D G3DSA:3.30.540.10 6 160 7.2E-46 T 14-10-2018 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 5.8E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 5.8E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 5.8E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 5.8E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 5.8E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 Pfam PF00459 Inositol monophosphatase family 8 253 2.7E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 Gene3D G3DSA:3.40.190.80 161 264 3.3E-26 T 14-10-2018 VS_0146 c60c1b724711065d70fe0631a553cc2e 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.418 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SMART SM00490 826 910 2.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2069 b604cabc34f825ede40852fc8d52f795 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SUPERFAMILY SSF143517 995 1146 2.48E-42 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SUPERFAMILY SSF52540 524 783 4.44E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SUPERFAMILY SSF52540 11 342 2.55E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Gene3D G3DSA:3.40.50.300 478 990 9.8E-235 T 14-10-2018 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Gene3D G3DSA:2.30.30.840 483 541 9.8E-235 T 14-10-2018 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SUPERFAMILY SSF52540 782 990 1.11E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Pfam PF03461 TRCF domain 1010 1101 8.6E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SMART SM00982 1008 1108 2.1E-44 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SMART SM01058 479 576 1.3E-50 T 14-10-2018 IPR003711 CarD-like/TRCF domain VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Gene3D G3DSA:3.40.50.11180 26 334 6.4E-117 T 14-10-2018 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SUPERFAMILY SSF52540 351 466 1.22E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Gene3D G3DSA:3.30.2060.10 130 215 6.4E-117 T 14-10-2018 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Gene3D G3DSA:3.40.50.300 542 781 9.8E-235 T 14-10-2018 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 3.7E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SMART SM00487 600 790 9.7E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 3.4E-16 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 3.5E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Gene3D G3DSA:3.40.50.11140 356 453 1.0E-33 T 14-10-2018 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.0E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1108 27.799 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VS_2069 b604cabc34f825ede40852fc8d52f795 1153 SUPERFAMILY SSF141259 470 548 1.31E-24 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.374 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 SMART SM00464 10 201 1.1E-73 T 14-10-2018 IPR003111 Lon, substrate-binding domain VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 9.3E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 SUPERFAMILY SSF52540 312 586 7.32E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Gene3D G3DSA:3.30.230.10 584 771 6.2E-85 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Gene3D G3DSA:3.40.50.300 312 489 2.0E-60 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Gene3D G3DSA:1.10.8.60 490 583 4.3E-32 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 SMART SM00382 347 491 6.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Gene3D G3DSA:1.20.58.1480 119 244 2.4E-44 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 SUPERFAMILY SSF54211 594 769 1.9E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Gene3D G3DSA:2.30.130.40 1 116 5.6E-35 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 1.8E-56 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 1.8E-56 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 1.8E-56 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 1.8E-56 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 1.8E-56 T 14-10-2018 VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 4.3E-40 T 14-10-2018 IPR003111 Lon, substrate-binding domain VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 SUPERFAMILY SSF88697 10 200 5.22E-47 T 14-10-2018 IPR015947 PUA-like superfamily VS_2203 6ff2bdad44c28a14684b4a84e222247c 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.0E-98 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VS_0475 3d7756dedb5ea7e16f21c5a7a560c15c 317 SUPERFAMILY SSF102114 13 270 1.02E-49 T 14-10-2018 VS_0475 3d7756dedb5ea7e16f21c5a7a560c15c 317 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.2E-130 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 VS_0475 3d7756dedb5ea7e16f21c5a7a560c15c 317 Pfam PF04055 Radical SAM superfamily 43 204 1.3E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_0475 3d7756dedb5ea7e16f21c5a7a560c15c 317 SMART SM00729 23 249 4.7E-46 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_0475 3d7756dedb5ea7e16f21c5a7a560c15c 317 Pfam PF16199 Radical_SAM C-terminal domain 211 281 1.2E-18 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VS_0475 3d7756dedb5ea7e16f21c5a7a560c15c 317 Gene3D G3DSA:3.80.30.20 42 281 4.7E-19 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VS_II0149 6aca41b4575e075da9e61fe0c34998b1 290 Gene3D G3DSA:3.40.1090.10 2 87 7.3E-6 T 14-10-2018 VS_II0149 6aca41b4575e075da9e61fe0c34998b1 290 Gene3D G3DSA:3.40.1090.10 90 227 9.4E-7 T 14-10-2018 VS_II0149 6aca41b4575e075da9e61fe0c34998b1 290 SUPERFAMILY SSF52151 3 271 1.88E-31 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_II0149 6aca41b4575e075da9e61fe0c34998b1 290 Pfam PF01734 Patatin-like phospholipase 6 170 1.4E-10 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VS_1822 fbb2025c9ba335d47700d00002b1831b 238 Gene3D G3DSA:3.30.420.10 43 228 4.7E-35 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1822 fbb2025c9ba335d47700d00002b1831b 238 Pfam PF00929 Exonuclease 50 219 5.8E-14 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_1822 fbb2025c9ba335d47700d00002b1831b 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 43 228 3.9E-23 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1822 fbb2025c9ba335d47700d00002b1831b 238 SUPERFAMILY SSF53098 38 227 1.66E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1822 fbb2025c9ba335d47700d00002b1831b 238 SMART SM00479 47 228 3.6E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_II0598 df7787226c83b38c110b375fa7049adb 829 SUPERFAMILY SSF50692 688 828 3.94E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VS_II0598 df7787226c83b38c110b375fa7049adb 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 14-10-2018 VS_II0598 df7787226c83b38c110b375fa7049adb 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.45 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VS_II0598 df7787226c83b38c110b375fa7049adb 829 Gene3D G3DSA:2.40.40.20 705 828 3.0E-46 T 14-10-2018 VS_II0598 df7787226c83b38c110b375fa7049adb 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VS_II0598 df7787226c83b38c110b375fa7049adb 829 SUPERFAMILY SSF53706 38 659 1.83E-199 T 14-10-2018 VS_II0598 df7787226c83b38c110b375fa7049adb 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VS_II0598 df7787226c83b38c110b375fa7049adb 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 3.8E-90 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_II0598 df7787226c83b38c110b375fa7049adb 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 14-10-2018 VS_II0598 df7787226c83b38c110b375fa7049adb 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 14-10-2018 VS_II0598 df7787226c83b38c110b375fa7049adb 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_II0598 df7787226c83b38c110b375fa7049adb 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 2.3E-27 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VS_II0598 df7787226c83b38c110b375fa7049adb 829 SMART SM00926 41 95 1.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_2810.1 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2810.1 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2810.1 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2810.1 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2810.1 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2810.1 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 14-10-2018 VS_II0290 1da7078852953edc8e0f0f9d8a74fe5f 469 Pfam PF04055 Radical SAM superfamily 67 238 1.5E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_II0290 1da7078852953edc8e0f0f9d8a74fe5f 469 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 1.0E-179 T 14-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW VS_II0290 1da7078852953edc8e0f0f9d8a74fe5f 469 SUPERFAMILY SSF102114 59 439 1.57E-80 T 14-10-2018 VS_II0290 1da7078852953edc8e0f0f9d8a74fe5f 469 Gene3D G3DSA:3.80.30.20 35 364 2.1E-71 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VS_II0290 1da7078852953edc8e0f0f9d8a74fe5f 469 SMART SM00729 62 285 2.6E-35 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_0523 57bbb86e7fb97944ad3342f50b071e0a 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_0523 57bbb86e7fb97944ad3342f50b071e0a 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_0523 57bbb86e7fb97944ad3342f50b071e0a 172 SUPERFAMILY SSF55811 6 152 2.57E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_0523 57bbb86e7fb97944ad3342f50b071e0a 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_0523 57bbb86e7fb97944ad3342f50b071e0a 172 Gene3D G3DSA:3.90.79.10 1 159 3.2E-51 T 14-10-2018 VS_0523 57bbb86e7fb97944ad3342f50b071e0a 172 Pfam PF00293 NUDIX domain 7 145 6.0E-27 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_0523 57bbb86e7fb97944ad3342f50b071e0a 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.497 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 692 2.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Gene3D G3DSA:3.30.565.10 533 696 1.6E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SUPERFAMILY SSF55874 523 696 1.09E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Gene3D G3DSA:1.10.287.130 434 532 2.6E-27 T 14-10-2018 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SUPERFAMILY SSF47384 457 535 2.55E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SMART SM00388 469 534 3.6E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SMART SM00073 911 1005 3.2E-4 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 7.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SUPERFAMILY SSF47226 900 996 8.11E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 PIRSF PIRSF036437 1 1006 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 1004 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Gene3D G3DSA:1.20.120.160 898 1009 4.5E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Pfam PF01627 Hpt domain 923 998 2.5E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Gene3D G3DSA:1.20.58.920 47 179 1.8E-45 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Gene3D G3DSA:1.20.58.920 180 322 7.5E-49 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SMART SM00448 711 831 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Pfam PF00072 Response regulator receiver domain 713 831 1.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 Gene3D G3DSA:3.40.50.2300 709 841 4.2E-29 T 14-10-2018 VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SUPERFAMILY SSF52172 711 859 6.97E-30 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1053 9b69a882bceaf585f38a347ced0b8efe 1010 SMART SM00387 581 694 3.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0887 15c47a3212f17f6088828be0a0458ef9 285 Pfam PF02567 Phenazine biosynthesis-like protein 27 281 1.4E-60 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VS_II0887 15c47a3212f17f6088828be0a0458ef9 285 Gene3D G3DSA:3.10.310.10 135 273 1.8E-83 T 14-10-2018 VS_II0887 15c47a3212f17f6088828be0a0458ef9 285 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 22 284 5.2E-37 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VS_II0887 15c47a3212f17f6088828be0a0458ef9 285 PIRSF PIRSF016184 19 285 5.0E-50 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VS_II0887 15c47a3212f17f6088828be0a0458ef9 285 Gene3D G3DSA:3.10.310.10 25 281 1.8E-83 T 14-10-2018 VS_II0887 15c47a3212f17f6088828be0a0458ef9 285 SUPERFAMILY SSF54506 21 284 2.62E-67 T 14-10-2018 VS_0818 9e8bc278693c1a8c93470dd8a621ff7b 136 PIRSF PIRSF039090 1 132 1.0E-42 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VS_0818 9e8bc278693c1a8c93470dd8a621ff7b 136 SUPERFAMILY SSF101116 6 127 3.14E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VS_0818 9e8bc278693c1a8c93470dd8a621ff7b 136 Gene3D G3DSA:1.20.120.340 2 126 2.3E-39 T 14-10-2018 VS_0818 9e8bc278693c1a8c93470dd8a621ff7b 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.6E-23 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VS_0818 9e8bc278693c1a8c93470dd8a621ff7b 136 Pfam PF02561 Flagellar protein FliS 6 122 1.8E-37 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VS_II0456 7376611601264091e0a0fe4b551120c7 308 Gene3D G3DSA:3.40.190.10 182 280 1.1E-37 T 14-10-2018 VS_II0456 7376611601264091e0a0fe4b551120c7 308 SUPERFAMILY SSF46785 11 93 4.15E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0456 7376611601264091e0a0fe4b551120c7 308 SUPERFAMILY SSF53850 97 307 1.14E-30 T 14-10-2018 VS_II0456 7376611601264091e0a0fe4b551120c7 308 Pfam PF03466 LysR substrate binding domain 100 307 9.0E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0456 7376611601264091e0a0fe4b551120c7 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 5.9E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0456 7376611601264091e0a0fe4b551120c7 308 Gene3D G3DSA:1.10.10.10 7 95 1.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0456 7376611601264091e0a0fe4b551120c7 308 Gene3D G3DSA:3.40.190.10 97 304 1.1E-37 T 14-10-2018 VS_II1398 0958560df5bda1972c4bfb56363fad7c 382 Gene3D G3DSA:3.20.20.70 2 381 5.7E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II1398 0958560df5bda1972c4bfb56363fad7c 382 PIRSF PIRSF000138 2 381 3.5E-121 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VS_II1398 0958560df5bda1972c4bfb56363fad7c 382 Pfam PF01070 FMN-dependent dehydrogenase 13 378 2.4E-123 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VS_II1398 0958560df5bda1972c4bfb56363fad7c 382 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 276 282 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VS_II1398 0958560df5bda1972c4bfb56363fad7c 382 SUPERFAMILY SSF51395 7 378 1.89E-95 T 14-10-2018 VS_1692 490b3e289144fd1c3917c5dd668a2d1b 541 Gene3D G3DSA:2.70.50.50 71 260 1.2E-56 T 14-10-2018 VS_1692 490b3e289144fd1c3917c5dd668a2d1b 541 SMART SM00495 491 540 3.0E-4 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_1692 490b3e289144fd1c3917c5dd668a2d1b 541 SUPERFAMILY SSF81296 71 258 3.78E-45 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_1692 490b3e289144fd1c3917c5dd668a2d1b 541 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 71 255 1.2E-33 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VS_1692 490b3e289144fd1c3917c5dd668a2d1b 541 SUPERFAMILY SSF51055 490 538 5.36E-8 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_1692 490b3e289144fd1c3917c5dd668a2d1b 541 Gene3D G3DSA:2.10.10.20 492 538 1.9E-8 T 14-10-2018 VS_II1123 f8b1783a47f27b629c63f3782d42765b 257 Gene3D G3DSA:3.40.50.300 4 256 1.5E-67 T 14-10-2018 VS_II1123 f8b1783a47f27b629c63f3782d42765b 257 SMART SM00382 29 217 3.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1123 f8b1783a47f27b629c63f3782d42765b 257 Pfam PF00005 ABC transporter 22 168 2.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1123 f8b1783a47f27b629c63f3782d42765b 257 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1123 f8b1783a47f27b629c63f3782d42765b 257 SUPERFAMILY SSF52540 4 229 9.25E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 Gene3D G3DSA:3.40.50.1980 123 296 1.1E-51 T 14-10-2018 VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 1.7E-15 T 14-10-2018 VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 1.7E-15 T 14-10-2018 VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 1.7E-15 T 14-10-2018 VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 1.7E-15 T 14-10-2018 VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 Pfam PF01497 Periplasmic binding protein 37 272 1.1E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 Gene3D G3DSA:3.40.50.1980 21 120 3.4E-28 T 14-10-2018 VS_2113 27e4032972674cc65cac72a2a70c8fd4 297 SUPERFAMILY SSF53807 32 294 5.49E-58 T 14-10-2018 VS_2813 9c9a20ce8969b5d66da99ad41177aeda 67 Gene3D G3DSA:3.30.1390.20 10 67 7.4E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VS_2813 9c9a20ce8969b5d66da99ad41177aeda 67 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 10 67 21.605 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2813 9c9a20ce8969b5d66da99ad41177aeda 67 Pfam PF00327 Ribosomal protein L30p/L7e 13 63 2.4E-20 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VS_2813 9c9a20ce8969b5d66da99ad41177aeda 67 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 13 67 3.1E-25 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2813 9c9a20ce8969b5d66da99ad41177aeda 67 PIRSF PIRSF002211 9 67 9.9E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2813 9c9a20ce8969b5d66da99ad41177aeda 67 SUPERFAMILY SSF55129 10 67 1.07E-22 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VS_II1373 bc2d61e8a315df4c25d778a1b1b145cf 96 Gene3D G3DSA:3.40.630.30 3 95 1.8E-21 T 14-10-2018 VS_II1373 bc2d61e8a315df4c25d778a1b1b145cf 96 Pfam PF14542 GCN5-related N-acetyl-transferase 18 91 1.4E-20 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase VS_II1373 bc2d61e8a315df4c25d778a1b1b145cf 96 SUPERFAMILY SSF55729 4 92 2.09E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_0250 3e07ccf087088893cf5cca5b3c4ac3e1 312 SUPERFAMILY SSF103481 53 157 4.32E-12 T 14-10-2018 VS_0250 3e07ccf087088893cf5cca5b3c4ac3e1 312 Pfam PF00892 EamA-like transporter family 22 151 1.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_0250 3e07ccf087088893cf5cca5b3c4ac3e1 312 Pfam PF00892 EamA-like transporter family 173 311 6.0E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_0250 3e07ccf087088893cf5cca5b3c4ac3e1 312 SUPERFAMILY SSF103481 235 310 3.14E-10 T 14-10-2018 VS_II1221 17d7694a06aa6ae5baf234213e5fb8a0 326 Gene3D G3DSA:3.30.360.10 135 326 1.4E-55 T 14-10-2018 VS_II1221 17d7694a06aa6ae5baf234213e5fb8a0 326 SUPERFAMILY SSF51735 2 152 1.97E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II1221 17d7694a06aa6ae5baf234213e5fb8a0 326 Gene3D G3DSA:3.40.50.720 1 134 1.2E-36 T 14-10-2018 VS_II1221 17d7694a06aa6ae5baf234213e5fb8a0 326 SUPERFAMILY SSF55347 137 291 4.25E-24 T 14-10-2018 VS_II1221 17d7694a06aa6ae5baf234213e5fb8a0 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 120 5.5E-29 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VS_1063 0d3c5f2922c6b81c650f9a9dd1a85da4 377 Gene3D G3DSA:2.60.120.650 1 207 1.2E-73 T 14-10-2018 VS_1063 0d3c5f2922c6b81c650f9a9dd1a85da4 377 SUPERFAMILY SSF51197 6 295 5.49E-70 T 14-10-2018 VS_1063 0d3c5f2922c6b81c650f9a9dd1a85da4 377 Gene3D G3DSA:1.10.10.2510 208 377 1.4E-42 T 14-10-2018 VS_1063 0d3c5f2922c6b81c650f9a9dd1a85da4 377 SMART SM00558 93 218 8.6E-4 T 14-10-2018 IPR003347 JmjC domain VS_1063 0d3c5f2922c6b81c650f9a9dd1a85da4 377 Pfam PF08007 Cupin superfamily protein 10 306 2.6E-88 T 14-10-2018 IPR003347 JmjC domain VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 SUPERFAMILY SSF53901 216 406 2.16E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 SUPERFAMILY SSF53901 3 252 4.77E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 Gene3D G3DSA:3.40.47.10 1 255 4.5E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 Gene3D G3DSA:3.40.47.10 261 407 3.7E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 SMART SM00825 Beta-ketoacyl synthase 5 407 4.1E-10 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 2.2E-42 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_0770 dbca5bb83795bac7b8ac818e127f19f8 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 1.4E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Pfam PF16330 MukB hinge domain 646 811 3.4E-71 T 14-10-2018 IPR032520 MukB, hinge domain VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Gene3D G3DSA:1.20.1060.30 668 779 1.1E-129 T 14-10-2018 VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Gene3D G3DSA:3.40.1140.10 1 227 8.1E-97 T 14-10-2018 VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Pfam PF04310 MukB N-terminal 2 227 1.6E-120 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Gene3D G3DSA:1.20.58.850 583 853 1.1E-129 T 14-10-2018 VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.5E-14 T 14-10-2018 VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 SUPERFAMILY SSF52540 21 1434 7.22E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 SUPERFAMILY SSF52540 26 224 2.58E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Gene3D G3DSA:3.40.1140.10 1384 1469 1.3E-37 T 14-10-2018 VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 PIRSF PIRSF005246 1 1483 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VS_1096 62c810aba32a3968c87c95333e0a1dd7 1484 Gene3D G3DSA:1.20.58.850 621 831 1.1E-129 T 14-10-2018 VS_II0097 f6e11606718aff12507d61b793a97a07 479 SUPERFAMILY SSF51445 3 476 5.87E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0097 f6e11606718aff12507d61b793a97a07 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II0097 f6e11606718aff12507d61b793a97a07 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II0097 f6e11606718aff12507d61b793a97a07 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II0097 f6e11606718aff12507d61b793a97a07 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 305 319 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II0097 f6e11606718aff12507d61b793a97a07 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II0097 f6e11606718aff12507d61b793a97a07 479 Pfam PF00232 Glycosyl hydrolase family 1 2 476 5.1E-136 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II0097 f6e11606718aff12507d61b793a97a07 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VS_II0097 f6e11606718aff12507d61b793a97a07 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site VS_II0097 f6e11606718aff12507d61b793a97a07 479 Gene3D G3DSA:3.20.20.80 1 479 1.6E-161 T 14-10-2018 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Pfam PF00310 Glutamine amidotransferases class-II 21 443 1.9E-184 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 SUPERFAMILY SSF69336 1235 1498 9.55E-96 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 SUPERFAMILY SSF51395 451 1221 2.12E-264 T 14-10-2018 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Gene3D G3DSA:2.160.20.60 1239 1510 1.0E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Pfam PF01493 GXGXG motif 1267 1452 1.9E-83 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Pfam PF04898 Glutamate synthase central domain 472 756 4.0E-115 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 SUPERFAMILY SSF56235 21 447 4.32E-152 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0474 9ace2afd17ec7bdd2bef4d42433f2864 1515 Pfam PF01645 Conserved region in glutamate synthase 817 1187 8.8E-150 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VS_II1518 41532a70e42f5f2ffa0e199a9450e310 234 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 11 230 4.0E-76 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 VS_II1518 41532a70e42f5f2ffa0e199a9450e310 234 Gene3D G3DSA:1.20.1050.10 99 232 4.7E-42 T 14-10-2018 VS_II1518 41532a70e42f5f2ffa0e199a9450e310 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 85 2.7E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_II1518 41532a70e42f5f2ffa0e199a9450e310 234 SUPERFAMILY SSF47616 97 229 2.32E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_II1518 41532a70e42f5f2ffa0e199a9450e310 234 Gene3D G3DSA:3.40.30.10 12 88 2.5E-22 T 14-10-2018 VS_II1518 41532a70e42f5f2ffa0e199a9450e310 234 SUPERFAMILY SSF52833 10 87 1.75E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0784 0d333ad4bbd022c7730ce690c6dafb60 85 Pfam PF00550 Phosphopantetheine attachment site 12 76 1.3E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_0784 0d333ad4bbd022c7730ce690c6dafb60 85 SUPERFAMILY SSF47336 4 83 8.64E-19 T 14-10-2018 IPR036736 ACP-like superfamily VS_0784 0d333ad4bbd022c7730ce690c6dafb60 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.031 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VS_0784 0d333ad4bbd022c7730ce690c6dafb60 85 Gene3D G3DSA:1.10.1200.10 2 80 4.9E-18 T 14-10-2018 IPR036736 ACP-like superfamily VS_II1230 fdf199ee3638b48dea735487875c1874 440 SUPERFAMILY SSF51905 147 312 3.98E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1230 fdf199ee3638b48dea735487875c1874 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 1.8E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.9E-14 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.9E-14 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 3.9E-14 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.9E-14 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 3.7E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_II1230 fdf199ee3638b48dea735487875c1874 440 SUPERFAMILY SSF55424 319 438 2.41E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_II1230 fdf199ee3638b48dea735487875c1874 440 Gene3D G3DSA:3.50.50.60 2 336 1.7E-147 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.6E-20 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.6E-20 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.6E-20 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 5.6E-20 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.6E-20 T 14-10-2018 VS_II1230 fdf199ee3638b48dea735487875c1874 440 Gene3D G3DSA:3.50.50.60 111 436 1.7E-147 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1230 fdf199ee3638b48dea735487875c1874 440 SUPERFAMILY SSF51905 1 195 5.87E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2907 c51523542fe0be8b76c3c9d223eacad8 208 Gene3D G3DSA:1.10.10.10 2 86 1.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2907 c51523542fe0be8b76c3c9d223eacad8 208 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 1.9E-6 T 14-10-2018 VS_2907 c51523542fe0be8b76c3c9d223eacad8 208 SUPERFAMILY SSF46785 3 183 9.11E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 SUPERFAMILY SSF55874 342 477 5.89E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 Pfam PF00672 HAMP domain 224 273 5.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 8.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 8.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 8.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 Gene3D G3DSA:3.30.565.10 339 480 5.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 477 5.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 Gene3D G3DSA:1.10.287.130 228 335 1.4E-16 T 14-10-2018 VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 SMART SM00387 374 479 1.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 SUPERFAMILY SSF47384 261 325 1.43E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 SMART SM00388 277 335 0.0079 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0874 b9bfb681316c38f1c5ab90fd1d992b1b 481 SMART SM00304 224 276 2.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0484 d4ec5dec0445f57444d0279182714115 318 SUPERFAMILY SSF54211 3 191 1.59E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0484 d4ec5dec0445f57444d0279182714115 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.9E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VS_0484 d4ec5dec0445f57444d0279182714115 318 Gene3D G3DSA:3.30.70.890 174 283 1.3E-88 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VS_0484 d4ec5dec0445f57444d0279182714115 318 SUPERFAMILY SSF55060 178 294 6.12E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VS_0484 d4ec5dec0445f57444d0279182714115 318 PIRSF PIRSF000676 1 316 1.1E-79 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VS_0484 d4ec5dec0445f57444d0279182714115 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 313 7.8E-109 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VS_0484 d4ec5dec0445f57444d0279182714115 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VS_0484 d4ec5dec0445f57444d0279182714115 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 14-10-2018 VS_0484 d4ec5dec0445f57444d0279182714115 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 14-10-2018 VS_0484 d4ec5dec0445f57444d0279182714115 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 14-10-2018 VS_0484 d4ec5dec0445f57444d0279182714115 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 14-10-2018 VS_0484 d4ec5dec0445f57444d0279182714115 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 14-10-2018 VS_0484 d4ec5dec0445f57444d0279182714115 318 Gene3D G3DSA:3.30.230.10 5 173 1.3E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_0484 d4ec5dec0445f57444d0279182714115 318 Pfam PF08544 GHMP kinases C terminal 218 291 1.9E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VS_0484 d4ec5dec0445f57444d0279182714115 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.158 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 Gene3D G3DSA:3.20.20.60 234 574 4.6E-123 T 14-10-2018 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 7.6E-122 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 SUPERFAMILY SSF47831 24 143 6.15E-32 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.0E-30 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 SUPERFAMILY SSF51621 252 549 1.96E-107 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 Gene3D G3DSA:3.50.30.10 4 233 1.3E-78 T 14-10-2018 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 SUPERFAMILY SSF52009 125 243 1.57E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 Gene3D G3DSA:1.10.274.10 21 146 1.3E-78 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 14-10-2018 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 14-10-2018 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 14-10-2018 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 14-10-2018 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 3.5E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.3E-242 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VS_2291 c47c6f74b372ea637eeb9af2bf5acd30 574 PIRSF PIRSF000732 1 574 5.4E-217 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VS_II0805 47b1b29a6593b46c33b3475a92206762 602 Gene3D G3DSA:3.40.50.2300 148 315 3.7E-5 T 14-10-2018 VS_II0805 47b1b29a6593b46c33b3475a92206762 602 Pfam PF01966 HD domain 405 527 2.2E-16 T 14-10-2018 IPR006674 HD domain VS_II0805 47b1b29a6593b46c33b3475a92206762 602 SMART SM00471 400 537 1.0E-6 T 14-10-2018 IPR003607 HD/PDEase domain VS_II0805 47b1b29a6593b46c33b3475a92206762 602 SUPERFAMILY SSF109604 396 568 2.17E-37 T 14-10-2018 VS_II0805 47b1b29a6593b46c33b3475a92206762 602 Gene3D G3DSA:3.40.50.2300 87 300 3.7E-5 T 14-10-2018 VS_II0805 47b1b29a6593b46c33b3475a92206762 602 Gene3D G3DSA:1.10.3210.10 379 581 1.1E-66 T 14-10-2018 VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 Gene3D G3DSA:3.40.50.300 222 427 6.0E-49 T 14-10-2018 VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 SMART SM00487 20 229 1.6E-54 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 Gene3D G3DSA:3.40.50.300 1 221 1.2E-72 T 14-10-2018 VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 SUPERFAMILY SSF52540 21 98 3.54E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.7E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 SMART SM00490 258 339 9.3E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0568 f18e5c36feee6eaeb0991236542dfbc5 428 SUPERFAMILY SSF52540 76 356 7.71E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 Pfam PF17392 Urocanase C-terminal domain 354 548 7.8E-92 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 Pfam PF17391 Urocanase N-terminal domain 17 143 3.8E-62 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 Hamap MF_00577 Urocanate hydratase [hutU]. 4 558 49.249 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 SUPERFAMILY SSF111326 11 557 3.66E-258 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 PIRSF PIRSF001423 1 563 4.9E-294 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 Gene3D G3DSA:3.40.1770.10 22 544 7.4E-257 T 14-10-2018 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 Pfam PF01175 Urocanase Rossmann-like domain 146 351 5.1E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 5.9E-292 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1217 f8dc7bdc90c52cc0692443e6fd0697fb 564 Gene3D G3DSA:3.40.50.10730 147 351 7.4E-257 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 Gene3D G3DSA:3.30.450.20 75 208 2.2E-34 T 14-10-2018 VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 Gene3D G3DSA:3.30.450.20 336 473 2.2E-28 T 14-10-2018 VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 SMART SM00267 460 625 4.9E-42 T 14-10-2018 IPR000160 GGDEF domain VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 Pfam PF02743 Cache domain 32 278 3.3E-13 T 14-10-2018 IPR033479 Double Cache domain 1 VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 SUPERFAMILY SSF103190 41 208 2.9E-45 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 SUPERFAMILY SSF55073 476 625 1.18E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 Gene3D G3DSA:3.30.70.270 474 633 3.4E-42 T 14-10-2018 VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 357 467 1.4E-17 T 14-10-2018 IPR000014 PAS domain VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 SMART SM00086 418 460 8.1E-5 T 14-10-2018 IPR001610 PAC motif VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 SUPERFAMILY SSF55785 358 457 8.38E-23 T 14-10-2018 IPR035965 PAS domain superfamily VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 SUPERFAMILY SSF103190 214 304 3.37E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 Pfam PF13426 PAS domain 359 459 4.6E-12 T 14-10-2018 IPR000014 PAS domain VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 Gene3D G3DSA:3.30.450.20 213 307 2.6E-8 T 14-10-2018 VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 621 1.4E-32 T 14-10-2018 IPR000160 GGDEF domain VS_II0810 8c4209629bccb140aebdc6b53c1a4e8e 634 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 468 623 6.9E-36 T 14-10-2018 IPR000160 GGDEF domain VS_II0850 f0bc90d678750c424ca1ab209bce9e40 516 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 25 511 7.3E-121 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 VS_II0850 f0bc90d678750c424ca1ab209bce9e40 516 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VS_II0850 f0bc90d678750c424ca1ab209bce9e40 516 Pfam PF07690 Major Facilitator Superfamily 28 421 7.0E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II0850 f0bc90d678750c424ca1ab209bce9e40 516 Gene3D G3DSA:1.20.1720.10 27 219 5.1E-41 T 14-10-2018 VS_II0850 f0bc90d678750c424ca1ab209bce9e40 516 SUPERFAMILY SSF103473 12 514 6.67E-63 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II0850 f0bc90d678750c424ca1ab209bce9e40 516 Gene3D G3DSA:1.20.1250.20 272 516 2.5E-8 T 14-10-2018 VS_0351 d93eb5c372ccd08648b51d41c8b6e3a9 244 Gene3D G3DSA:3.30.2350.10 4 217 9.1E-65 T 14-10-2018 VS_0351 d93eb5c372ccd08648b51d41c8b6e3a9 244 Pfam PF00849 RNA pseudouridylate synthase 22 167 8.3E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0351 d93eb5c372ccd08648b51d41c8b6e3a9 244 SUPERFAMILY SSF55120 15 220 1.92E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0351 d93eb5c372ccd08648b51d41c8b6e3a9 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_II0207 ba7adcf96b3dbc274d7df958d2885a03 287 Gene3D G3DSA:1.10.3720.10 61 285 9.0E-35 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0207 ba7adcf96b3dbc274d7df958d2885a03 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 17 283 5.4E-97 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VS_II0207 ba7adcf96b3dbc274d7df958d2885a03 287 SUPERFAMILY SSF161098 22 274 2.15E-40 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0207 ba7adcf96b3dbc274d7df958d2885a03 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 9.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1675 6c7b7ff29dde262c3c824ee38190b46c 140 Pfam PF12975 Domain of unknown function (DUF3859) 5 125 9.3E-47 T 14-10-2018 IPR024331 Domain of unknown function DUF3859 VS_1675 6c7b7ff29dde262c3c824ee38190b46c 140 Gene3D G3DSA:2.60.40.2390 25 126 2.4E-5 T 14-10-2018 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 265 2.9E-97 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 Gene3D G3DSA:3.40.50.720 3 264 9.6E-99 T 14-10-2018 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 SUPERFAMILY SSF55347 127 236 2.62E-37 T 14-10-2018 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 Gene3D G3DSA:3.30.360.10 127 234 9.6E-99 T 14-10-2018 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 SUPERFAMILY SSF51735 2 268 2.2E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0460 7867412b23c157fc6be00a26f2c8d468 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.4E-43 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 PIRSF PIRSF000161 1 268 2.9E-87 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.06 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_0460 7867412b23c157fc6be00a26f2c8d468 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.8E-38 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Gene3D G3DSA:3.30.470.20 191 329 3.7E-60 T 14-10-2018 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.1E-182 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 SUPERFAMILY SSF51246 329 424 1.52E-31 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 SUPERFAMILY SSF56059 104 320 7.6E-66 T 14-10-2018 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Gene3D G3DSA:3.90.600.10 330 424 1.3E-31 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 7.1E-29 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.8E-34 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.646 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 8.1E-82 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 SMART SM01209 103 296 2.5E-137 T 14-10-2018 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 SUPERFAMILY SSF52440 1 103 5.32E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Gene3D G3DSA:3.30.1490.20 121 190 4.9E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 SMART SM01210 330 423 3.0E-51 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2952 4455eccff0d9fe549e6c7aac695e07f0 429 Gene3D G3DSA:3.40.50.20 2 95 1.1E-36 T 14-10-2018 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Gene3D G3DSA:1.10.601.10 9 165 1.7E-48 T 14-10-2018 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 92 319 4.3E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 SUPERFAMILY SSF88659 169 242 1.35E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Pfam PF04542 Sigma-70 region 2 96 165 7.0E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Pfam PF04539 Sigma-70 region 3 176 249 1.2E-20 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 18 330 39.328 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 SUPERFAMILY SSF88659 226 325 8.64E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 49 330 8.2E-138 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Gene3D G3DSA:1.10.10.10 169 243 9.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Pfam PF00140 Sigma-70 factor, region 1.2 58 91 4.1E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Pfam PF04545 Sigma-70, region 4 264 317 6.9E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.3E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.3E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.3E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.3E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.3E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 Gene3D G3DSA:1.10.10.10 252 330 2.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_2599 4c45094b4810e302ea74f1e32f872aa8 335 SUPERFAMILY SSF88946 57 166 9.55E-46 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_0382 41b65a73c580f0e691127d477c5ea689 445 Gene3D G3DSA:2.40.30.170 60 361 1.9E-28 T 14-10-2018 VS_0382 41b65a73c580f0e691127d477c5ea689 445 Gene3D G3DSA:2.40.50.100 66 252 1.9E-28 T 14-10-2018 VS_0382 41b65a73c580f0e691127d477c5ea689 445 Gene3D G3DSA:1.10.287.470 103 218 1.9E-28 T 14-10-2018 VS_0382 41b65a73c580f0e691127d477c5ea689 445 Gene3D G3DSA:2.40.420.20 362 424 1.9E-28 T 14-10-2018 VS_0382 41b65a73c580f0e691127d477c5ea689 445 SUPERFAMILY SSF111369 60 325 5.1E-5 T 14-10-2018 VS_II0842 232c73a4273dc6de9f86b7debb1091a9 260 Pfam PF12833 Helix-turn-helix domain 178 255 5.7E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0842 232c73a4273dc6de9f86b7debb1091a9 260 Gene3D G3DSA:1.10.10.60 152 259 1.2E-22 T 14-10-2018 VS_II0842 232c73a4273dc6de9f86b7debb1091a9 260 SMART SM00342 172 254 8.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0842 232c73a4273dc6de9f86b7debb1091a9 260 SUPERFAMILY SSF46689 207 256 9.86E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0842 232c73a4273dc6de9f86b7debb1091a9 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0842 232c73a4273dc6de9f86b7debb1091a9 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 Gene3D G3DSA:3.40.50.720 3 200 1.5E-43 T 14-10-2018 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 199 490 1.8E-122 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 Gene3D G3DSA:1.10.1040.10 201 456 7.0E-102 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 378 400 6.5E-54 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 6 29 6.5E-54 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 76 105 6.5E-54 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 188 216 6.5E-54 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 270 297 6.5E-54 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 274 286 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 SMART SM01350 199 491 2.4E-195 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 Gene3D G3DSA:1.20.5.320 457 493 7.5E-17 T 14-10-2018 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 174 1.3E-33 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 SUPERFAMILY SSF51735 7 177 5.84E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0409 a52007951462fce01b8d6ee560cb531d 502 PIRSF PIRSF000109 1 499 2.0E-173 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 7 491 5.2E-173 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_II0409 a52007951462fce01b8d6ee560cb531d 502 SUPERFAMILY SSF48179 197 492 6.39E-118 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_3153 7895542d04a470a028788a33b65bc63f 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.552 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 Gene3D G3DSA:1.10.287.80 6 284 5.2E-111 T 14-10-2018 VS_3153 7895542d04a470a028788a33b65bc63f 288 Pfam PF00231 ATP synthase 5 287 5.0E-98 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 7.3E-111 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 Gene3D G3DSA:3.40.1380.10 61 207 5.2E-111 T 14-10-2018 VS_3153 7895542d04a470a028788a33b65bc63f 288 SUPERFAMILY SSF52943 2 288 2.26E-97 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3153 7895542d04a470a028788a33b65bc63f 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-35 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 1.2E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.57 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 Gene3D G3DSA:1.10.3860.10 3 405 5.3E-72 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 SUPERFAMILY SSF118215 15 399 2.48E-96 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 2.6E-15 T 14-10-2018 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 2.6E-15 T 14-10-2018 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 2.6E-15 T 14-10-2018 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 2.6E-15 T 14-10-2018 VS_II0175 b023376af596fe777d95adb3ed845b2e 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 2.6E-15 T 14-10-2018 VS_0210 d97875c43b3c4b16a3dcdf0506335ffa 313 Gene3D G3DSA:3.10.560.10 211 287 3.3E-15 T 14-10-2018 VS_0210 d97875c43b3c4b16a3dcdf0506335ffa 313 Pfam PF06251 Capsule biosynthesis GfcC 203 311 1.0E-27 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 VS_0210 d97875c43b3c4b16a3dcdf0506335ffa 313 Pfam PF06251 Capsule biosynthesis GfcC 60 179 7.0E-7 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 SUPERFAMILY SSF81923 4 156 1.44E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 SUPERFAMILY SSF52540 159 545 5.66E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Gene3D G3DSA:1.10.1780.10 1 148 2.9E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Gene3D G3DSA:1.10.8.60 766 856 6.8E-25 T 14-10-2018 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Gene3D G3DSA:3.40.50.300 158 347 2.5E-75 T 14-10-2018 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 SUPERFAMILY SSF52540 546 853 8.99E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.7E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.2E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Gene3D G3DSA:3.40.50.300 550 764 5.7E-88 T 14-10-2018 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 337 2.9E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Gene3D G3DSA:3.40.50.300 348 544 8.3E-67 T 14-10-2018 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 SMART SM00382 198 344 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 SMART SM00382 597 763 5.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.5E-12 T 14-10-2018 IPR004176 Clp, N-terminal VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.4E-14 T 14-10-2018 IPR004176 Clp, N-terminal VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 SMART SM01086 766 855 2.0E-32 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VS_0562 a10104eb2350a3c86fb88e24ea7d7ece 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 1.0E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 Gene3D G3DSA:3.40.50.2300 1 121 4.3E-35 T 14-10-2018 VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 Pfam PF00072 Response regulator receiver domain 3 112 4.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 SUPERFAMILY SSF52172 2 118 1.38E-35 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 Gene3D G3DSA:1.10.10.10 123 224 8.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 SUPERFAMILY SSF46894 122 222 8.5E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 SMART SM00862 147 222 1.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II1475 8f61abac2afd1f26be32c01ebb6d5162 224 SMART SM00448 1 112 4.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0233 f8362fd2ee10064384ca00b20bf516df 186 Pfam PF02397 Bacterial sugar transferase 7 176 1.5E-48 T 14-10-2018 IPR003362 Bacterial sugar transferase VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 Gene3D G3DSA:3.30.1330.60 176 293 2.3E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 3.3E-147 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 SUPERFAMILY SSF103088 157 287 4.05E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 Gene3D G3DSA:2.60.40.2540 22 175 5.0E-55 T 14-10-2018 VS_0968 9d2864b3a234b5f58aeca2f4fd59ded8 293 Pfam PF00691 OmpA family 187 282 7.1E-20 T 14-10-2018 IPR006665 OmpA-like domain VS_II0294 99a23d65112d2a8e8e09e21129165473 92 Gene3D G3DSA:3.10.50.40 2 92 3.7E-32 T 14-10-2018 VS_II0294 99a23d65112d2a8e8e09e21129165473 92 SUPERFAMILY SSF54534 6 89 3.73E-24 T 14-10-2018 VS_II0294 99a23d65112d2a8e8e09e21129165473 92 Pfam PF13616 PPIC-type PPIASE domain 14 89 2.2E-21 T 14-10-2018 VS_II0146 6f421642ed1ca3e29e67cfa1f11cad9e 333 SUPERFAMILY SSF89733 2 333 1.44E-82 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 VS_II0146 6f421642ed1ca3e29e67cfa1f11cad9e 333 Gene3D G3DSA:1.10.1530.10 7 273 1.3E-91 T 14-10-2018 VS_II0146 6f421642ed1ca3e29e67cfa1f11cad9e 333 Pfam PF02615 Malate/L-lactate dehydrogenase 4 330 3.3E-89 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 VS_II0146 6f421642ed1ca3e29e67cfa1f11cad9e 333 Gene3D G3DSA:3.30.60.50 179 221 1.3E-91 T 14-10-2018 VS_II0146 6f421642ed1ca3e29e67cfa1f11cad9e 333 Gene3D G3DSA:3.30.1370.60 66 271 1.3E-91 T 14-10-2018 VS_2168 93708519968d52835026a35a7c7318e0 151 Gene3D G3DSA:1.10.10.10 2 54 4.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2168 93708519968d52835026a35a7c7318e0 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.4E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2168 93708519968d52835026a35a7c7318e0 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.4E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2168 93708519968d52835026a35a7c7318e0 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.4E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2168 93708519968d52835026a35a7c7318e0 151 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 2.5E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_2168 93708519968d52835026a35a7c7318e0 151 Gene3D G3DSA:3.30.70.920 55 139 1.8E-24 T 14-10-2018 VS_2168 93708519968d52835026a35a7c7318e0 151 SMART SM00344 2 111 8.7E-47 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_2168 93708519968d52835026a35a7c7318e0 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 2.0E-17 T 14-10-2018 VS_2168 93708519968d52835026a35a7c7318e0 151 SUPERFAMILY SSF46785 3 89 9.34E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2168 93708519968d52835026a35a7c7318e0 151 SUPERFAMILY SSF54909 63 151 9.52E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_2168 93708519968d52835026a35a7c7318e0 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 SUPERFAMILY SSF55021 420 513 3.66E-27 T 14-10-2018 VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 1.3E-82 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 SUPERFAMILY SSF53686 15 365 4.06E-106 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 Gene3D G3DSA:3.40.1020.10 338 514 2.6E-71 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 513 2.9E-251 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 Gene3D G3DSA:3.40.50.1100 25 327 4.9E-134 T 14-10-2018 VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 427 513 4.5E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.2E-25 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VS_3147 ccffe4e614c43f60165ccb16aaa360af 514 Gene3D G3DSA:3.40.50.1100 61 157 4.9E-134 T 14-10-2018 VS_1307 1d3e50f19b3450d52b1775e5fb33abe3 386 Gene3D G3DSA:1.10.3210.10 164 379 1.2E-61 T 14-10-2018 VS_1307 1d3e50f19b3450d52b1775e5fb33abe3 386 SMART SM00471 184 335 5.9E-10 T 14-10-2018 IPR003607 HD/PDEase domain VS_1307 1d3e50f19b3450d52b1775e5fb33abe3 386 Pfam PF01966 HD domain 190 325 2.6E-17 T 14-10-2018 IPR006674 HD domain VS_1307 1d3e50f19b3450d52b1775e5fb33abe3 386 SUPERFAMILY SSF109604 179 364 2.04E-31 T 14-10-2018 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 Gene3D G3DSA:3.40.50.150 141 409 4.5E-51 T 14-10-2018 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 Pfam PF13411 MerR HTH family regulatory protein 2 69 3.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 Gene3D G3DSA:1.10.1660.10 1 110 5.9E-23 T 14-10-2018 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 Pfam PF13847 Methyltransferase domain 185 306 4.6E-15 T 14-10-2018 IPR025714 Methyltransferase domain VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 SMART SM00422 2 70 4.5E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 SUPERFAMILY SSF53335 129 347 7.54E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II1308 9efb7114205375aa07b9ffd80e803e7a 410 SUPERFAMILY SSF46955 2 102 5.49E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VS_II1521 2cf41d2ef48cd98fa3073a94b045ca56 357 SUPERFAMILY SSF54593 5 341 3.41E-76 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II1521 2cf41d2ef48cd98fa3073a94b045ca56 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 2.0E-129 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VS_II1521 2cf41d2ef48cd98fa3073a94b045ca56 357 Gene3D G3DSA:3.10.180.10 158 355 5.3E-69 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II1521 2cf41d2ef48cd98fa3073a94b045ca56 357 Gene3D G3DSA:3.10.180.10 3 155 1.4E-44 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II1521 2cf41d2ef48cd98fa3073a94b045ca56 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 3.7E-55 T 14-10-2018 VS_II1521 2cf41d2ef48cd98fa3073a94b045ca56 357 PIRSF PIRSF009283 1 355 2.7E-123 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VS_II1521 2cf41d2ef48cd98fa3073a94b045ca56 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 3.3E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_II0078 0db1a446921cc97133909261d3a999d2 354 SUPERFAMILY SSF51735 20 162 1.28E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0078 0db1a446921cc97133909261d3a999d2 354 SUPERFAMILY SSF55347 167 316 1.96E-15 T 14-10-2018 VS_II0078 0db1a446921cc97133909261d3a999d2 354 Gene3D G3DSA:3.40.50.720 12 167 6.8E-37 T 14-10-2018 VS_II0078 0db1a446921cc97133909261d3a999d2 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 26 142 3.6E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VS_II0078 0db1a446921cc97133909261d3a999d2 354 Gene3D G3DSA:3.30.360.10 174 348 2.8E-24 T 14-10-2018 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Pfam PF00512 His Kinase A (phospho-acceptor) domain 795 860 4.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 SMART SM00448 1033 1146 4.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 SUPERFAMILY SSF55785 633 748 3.14E-9 T 14-10-2018 IPR035965 PAS domain superfamily VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Pfam PF00072 Response regulator receiver domain 1035 1146 1.4E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Gene3D G3DSA:3.30.565.10 865 1017 4.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 SUPERFAMILY SSF47384 781 861 6.67E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Gene3D G3DSA:3.30.450.20 623 753 4.2E-13 T 14-10-2018 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Gene3D G3DSA:1.20.1730.10 40 516 2.9E-8 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 973 991 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 997 1010 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 940 954 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 968 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 SUPERFAMILY SSF52172 1032 1149 5.69E-18 T 14-10-2018 IPR011006 CheY-like superfamily VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Pfam PF12860 PAS fold 641 755 9.9E-44 T 14-10-2018 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 SMART SM00388 795 860 4.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 905 1010 3.8E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 SUPERFAMILY SSF55874 850 1010 1.96E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 SMART SM00387 904 1013 1.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Gene3D G3DSA:3.40.50.2300 1030 1150 3.0E-17 T 14-10-2018 VS_2938 2a6fb696bae77c428cb35fc9fb342cac 1150 Gene3D G3DSA:1.10.287.130 754 858 1.6E-13 T 14-10-2018 VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.2E-12 T 14-10-2018 VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 SUPERFAMILY SSF56784 9 236 1.18E-39 T 14-10-2018 IPR036412 HAD-like superfamily VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 2.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 2.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 Gene3D G3DSA:1.20.120.1600 24 110 4.7E-60 T 14-10-2018 VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 Gene3D G3DSA:3.40.50.1000 11 232 4.7E-60 T 14-10-2018 IPR023214 HAD superfamily VS_3044 ea94a0bfb198858c0337c0c402cc3dc2 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 199 5.6E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0425 e252140d416f332833ec6325bfa7f496 142 Gene3D G3DSA:3.30.110.70 38 142 1.6E-41 T 14-10-2018 VS_II0425 e252140d416f332833ec6325bfa7f496 142 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 37 141 24.288 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 VS_II0425 e252140d416f332833ec6325bfa7f496 142 SUPERFAMILY SSF117782 37 141 6.54E-38 T 14-10-2018 IPR035439 UPF0145 domain superfamily VS_II0425 e252140d416f332833ec6325bfa7f496 142 Pfam PF01906 Putative heavy-metal-binding 37 141 8.6E-39 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 SUPERFAMILY SSF54980 364 430 1.25E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 SUPERFAMILY SSF52540 198 379 7.81E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 Gene3D G3DSA:3.40.50.11060 18 138 9.4E-36 T 14-10-2018 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.781 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.4E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 7.3E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 PIRSF PIRSF006809 3 422 3.6E-149 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 9.3E-156 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 Pfam PF01926 50S ribosome-binding GTPase 200 318 6.5E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 Gene3D G3DSA:3.40.50.300 197 369 6.8E-43 T 14-10-2018 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.1E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.1E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0271 79cd4c5691f04b781a5ba15c0c20b15d 435 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.1E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_1083 ef8a83fcedaeb0369a7886e4bcc6f679 484 Pfam PF08323 Starch synthase catalytic domain 8 238 3.8E-68 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VS_1083 ef8a83fcedaeb0369a7886e4bcc6f679 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 6.5E-164 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VS_1083 ef8a83fcedaeb0369a7886e4bcc6f679 484 Pfam PF00534 Glycosyl transferases group 1 302 441 9.2E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VS_1083 ef8a83fcedaeb0369a7886e4bcc6f679 484 Gene3D G3DSA:3.40.50.2000 256 467 1.1E-157 T 14-10-2018 VS_1083 ef8a83fcedaeb0369a7886e4bcc6f679 484 SUPERFAMILY SSF53756 6 483 4.19E-110 T 14-10-2018 VS_1083 ef8a83fcedaeb0369a7886e4bcc6f679 484 Gene3D G3DSA:3.40.50.2000 8 481 1.1E-157 T 14-10-2018 VS_1083 ef8a83fcedaeb0369a7886e4bcc6f679 484 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.188 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VS_II1155 c4b175ace1308ba43573a9d6653a0dc7 487 SUPERFAMILY SSF117074 45 79 7.59E-5 T 14-10-2018 VS_2037 87cc271258ceb400ab2301fd6e247b50 234 PIRSF PIRSF006755 8 232 1.1E-74 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VS_2037 87cc271258ceb400ab2301fd6e247b50 234 Gene3D G3DSA:3.40.50.300 10 231 8.2E-65 T 14-10-2018 VS_2037 87cc271258ceb400ab2301fd6e247b50 234 Pfam PF13500 AAA domain 11 218 2.3E-36 T 14-10-2018 VS_2037 87cc271258ceb400ab2301fd6e247b50 234 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 9 219 29.075 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VS_2037 87cc271258ceb400ab2301fd6e247b50 234 SUPERFAMILY SSF52540 8 218 4.61E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2037 87cc271258ceb400ab2301fd6e247b50 234 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 13 183 3.0E-52 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VS_1584 6a95657a1f7267b35fd5bcfe116b2f1a 162 Gene3D G3DSA:3.10.180.10 26 156 1.5E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_1584 6a95657a1f7267b35fd5bcfe116b2f1a 162 SUPERFAMILY SSF54593 25 153 7.12E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_1584 6a95657a1f7267b35fd5bcfe116b2f1a 162 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 29 149 9.2E-19 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_2538 1ddac5a4b9b2602d53b99c318b87ebb0 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.5E-72 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 VS_2538 1ddac5a4b9b2602d53b99c318b87ebb0 176 SUPERFAMILY SSF53271 2 171 5.64E-54 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_2538 1ddac5a4b9b2602d53b99c318b87ebb0 176 Gene3D G3DSA:3.40.50.2020 1 176 1.6E-64 T 14-10-2018 VS_2538 1ddac5a4b9b2602d53b99c318b87ebb0 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 6.8E-27 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Gene3D G3DSA:1.10.287.560 344 403 1.4E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Pfam PF01627 Hpt domain 8 99 3.6E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Gene3D G3DSA:3.30.565.10 404 590 3.7E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SMART SM00073 6 103 2.8E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SUPERFAMILY SSF47226 6 128 4.58E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SMART SM00260 583 724 3.1E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 451 590 9.1E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SUPERFAMILY SSF47384 345 404 5.1E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Gene3D G3DSA:1.20.120.160 2 141 5.8E-36 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SMART SM00387 448 591 1.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SMART SM01231 343 403 1.4E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Gene3D G3DSA:2.40.50.180 614 679 3.6E-34 T 14-10-2018 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Pfam PF01584 CheW-like domain 597 726 4.4E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Gene3D G3DSA:2.30.30.40 591 720 3.6E-34 T 14-10-2018 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SUPERFAMILY SSF50341 590 724 2.62E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VS_0843 98ef818f369dc00f4b93eb306dd94061 733 SUPERFAMILY SSF55874 406 589 2.23E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0843 98ef818f369dc00f4b93eb306dd94061 733 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 344 403 2.7E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 Gene3D G3DSA:1.10.3680.10 39 193 1.6E-26 T 14-10-2018 IPR029024 TerB-like VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.708 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 SUPERFAMILY SSF158682 4 231 5.75E-34 T 14-10-2018 IPR029024 TerB-like VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 Pfam PF00226 DnaJ domain 218 278 2.6E-13 T 14-10-2018 IPR001623 DnaJ domain VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 SMART SM00271 217 282 1.9E-18 T 14-10-2018 IPR001623 DnaJ domain VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 Gene3D G3DSA:1.10.287.110 198 282 2.4E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 PRINTS PR00625 DnaJ domain signature 220 238 2.4E-11 T 14-10-2018 IPR001623 DnaJ domain VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 PRINTS PR00625 DnaJ domain signature 238 253 2.4E-11 T 14-10-2018 IPR001623 DnaJ domain VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 PRINTS PR00625 DnaJ domain signature 262 282 2.4E-11 T 14-10-2018 IPR001623 DnaJ domain VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 SUPERFAMILY SSF46565 214 278 5.68E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_0374 0cd9cb7b5812742f1f33cab7d5d6ecd6 284 Pfam PF05099 Tellurite resistance protein TerB 46 177 6.1E-18 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VS_0024 15e718e16bfbc7f0379e66fd50d28e41 301 Pfam PF00482 Type II secretion system (T2SS), protein F 163 289 9.3E-15 T 14-10-2018 IPR018076 Type II secretion system F domain VS_II0490 9df7da42167f3219b98efa8744f2c698 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 7.7E-25 T 14-10-2018 IPR001453 MoaB/Mog domain VS_II0490 9df7da42167f3219b98efa8744f2c698 411 Gene3D G3DSA:2.170.190.11 53 145 2.7E-143 T 14-10-2018 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 SUPERFAMILY SSF63867 332 410 5.76E-23 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 SUPERFAMILY SSF63882 9 180 2.49E-54 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 1.2E-20 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 Gene3D G3DSA:3.90.105.10 31 178 2.7E-143 T 14-10-2018 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 Gene3D G3DSA:2.40.340.10 332 401 2.7E-143 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.0E-32 T 14-10-2018 IPR001453 MoaB/Mog domain VS_II0490 9df7da42167f3219b98efa8744f2c698 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 2.7E-45 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_II0490 9df7da42167f3219b98efa8744f2c698 411 SUPERFAMILY SSF53218 181 326 4.19E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_II0490 9df7da42167f3219b98efa8744f2c698 411 Gene3D G3DSA:3.40.980.10 179 331 2.7E-143 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_II0490 9df7da42167f3219b98efa8744f2c698 411 SMART SM00852 184 321 1.1E-40 T 14-10-2018 IPR001453 MoaB/Mog domain VS_0470 3438226442b60d47e6eac47819ea16bf 481 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 17 481 2.8E-251 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VS_0470 3438226442b60d47e6eac47819ea16bf 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 158 468 4.9E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_0470 3438226442b60d47e6eac47819ea16bf 481 Gene3D G3DSA:3.50.50.60 158 246 1.2E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0470 3438226442b60d47e6eac47819ea16bf 481 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 6.7E-37 T 14-10-2018 VS_0470 3438226442b60d47e6eac47819ea16bf 481 PRINTS PR00419 Adrenodoxin reductase family signature 182 195 6.7E-37 T 14-10-2018 VS_0470 3438226442b60d47e6eac47819ea16bf 481 PRINTS PR00419 Adrenodoxin reductase family signature 159 181 6.7E-37 T 14-10-2018 VS_0470 3438226442b60d47e6eac47819ea16bf 481 PRINTS PR00419 Adrenodoxin reductase family signature 224 234 6.7E-37 T 14-10-2018 VS_0470 3438226442b60d47e6eac47819ea16bf 481 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 6.7E-37 T 14-10-2018 VS_0470 3438226442b60d47e6eac47819ea16bf 481 Gene3D G3DSA:3.50.50.60 255 409 7.2E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0470 3438226442b60d47e6eac47819ea16bf 481 Gene3D G3DSA:1.10.1060.10 7 157 1.8E-34 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_0470 3438226442b60d47e6eac47819ea16bf 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 36 145 1.9E-38 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VS_0470 3438226442b60d47e6eac47819ea16bf 481 SUPERFAMILY SSF46548 15 168 6.28E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_0470 3438226442b60d47e6eac47819ea16bf 481 SUPERFAMILY SSF51971 156 410 3.77E-68 T 14-10-2018 VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 Gene3D G3DSA:3.60.15.10 6 439 2.1E-127 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 SUPERFAMILY SSF56281 1 451 9.83E-121 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 SMART SM01027 252 382 1.0E-54 T 14-10-2018 IPR022712 Beta-Casp domain VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 452 7.9E-14 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 Gene3D G3DSA:3.40.50.10890 220 408 2.1E-127 T 14-10-2018 VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 Pfam PF10996 Beta-Casp domain 252 382 1.9E-26 T 14-10-2018 IPR022712 Beta-Casp domain VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 Pfam PF00753 Metallo-beta-lactamase superfamily 14 212 7.3E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_0634 6651c76af8c9c5c172d5b555057fccb3 456 SMART SM00849 13 218 8.4E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_0318 fa87d777d84dd521a22684f7fd243bcc 379 Gene3D G3DSA:3.40.640.10 29 276 2.5E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_0318 fa87d777d84dd521a22684f7fd243bcc 379 Pfam PF00266 Aminotransferase class-V 20 358 1.0E-32 T 14-10-2018 IPR000192 Aminotransferase class V domain VS_0318 fa87d777d84dd521a22684f7fd243bcc 379 PIRSF PIRSF000524 13 379 3.5E-111 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VS_0318 fa87d777d84dd521a22684f7fd243bcc 379 SUPERFAMILY SSF53383 16 379 5.27E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_0318 fa87d777d84dd521a22684f7fd243bcc 379 Gene3D G3DSA:3.90.1150.10 16 378 2.5E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_0318 fa87d777d84dd521a22684f7fd243bcc 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 PRINTS PR00421 Thioredoxin family signature 58 66 6.6E-7 T 14-10-2018 VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 PRINTS PR00421 Thioredoxin family signature 106 117 6.6E-7 T 14-10-2018 VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 PRINTS PR00421 Thioredoxin family signature 66 75 6.6E-7 T 14-10-2018 VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 47 141 1.6E-34 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 PIRSF PIRSF000077 38 142 1.1E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 Gene3D G3DSA:2.20.28.140 1 37 8.4E-15 T 14-10-2018 VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 SUPERFAMILY SSF52833 29 142 6.02E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 Pfam PF00085 Thioredoxin 44 140 1.0E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VS_II0704 1544bc01a3a70f5997a57edc4cf90d71 144 Gene3D G3DSA:3.40.30.10 41 144 9.8E-33 T 14-10-2018 VS_0993 f4861757709e7c244995904629be4269 323 Pfam PF00005 ABC transporter 24 180 7.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0993 f4861757709e7c244995904629be4269 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 7.6E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_0993 f4861757709e7c244995904629be4269 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0993 f4861757709e7c244995904629be4269 323 Gene3D G3DSA:3.40.50.300 1 321 4.3E-98 T 14-10-2018 VS_0993 f4861757709e7c244995904629be4269 323 SMART SM00382 32 238 3.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0993 f4861757709e7c244995904629be4269 323 SUPERFAMILY SSF52540 31 301 2.0E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0993 f4861757709e7c244995904629be4269 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 1.6E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_II0106 31bd216ca6f2b6bc89a918c2df15d4e2 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0106 31bd216ca6f2b6bc89a918c2df15d4e2 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0106 31bd216ca6f2b6bc89a918c2df15d4e2 187 Gene3D G3DSA:1.10.357.10 6 183 3.3E-28 T 14-10-2018 VS_II0106 31bd216ca6f2b6bc89a918c2df15d4e2 187 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 79 166 9.0E-6 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 VS_II0106 31bd216ca6f2b6bc89a918c2df15d4e2 187 SUPERFAMILY SSF46689 19 77 2.87E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0106 31bd216ca6f2b6bc89a918c2df15d4e2 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 68 3.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0106 31bd216ca6f2b6bc89a918c2df15d4e2 187 SUPERFAMILY SSF48498 84 180 1.56E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 SUPERFAMILY SSF88659 137 198 1.63E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 Pfam PF04542 Sigma-70 region 2 38 105 4.5E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 Pfam PF08281 Sigma-70, region 4 148 194 5.0E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 Gene3D G3DSA:1.10.10.10 135 205 2.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 Gene3D G3DSA:1.10.1740.10 12 134 2.0E-45 T 14-10-2018 VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 15 203 2.8E-103 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 198 9.3E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 60 91 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_2625 f2be878b122ebffb4775fc6fb37a1d16 205 SUPERFAMILY SSF88946 14 120 1.73E-32 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_1137 295bf27c7f8a10727d45e712636f033b 229 Pfam PF00072 Response regulator receiver domain 8 117 4.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1137 295bf27c7f8a10727d45e712636f033b 229 SUPERFAMILY SSF46894 127 226 1.64E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_1137 295bf27c7f8a10727d45e712636f033b 229 Gene3D G3DSA:3.40.50.2300 1 126 2.4E-35 T 14-10-2018 VS_1137 295bf27c7f8a10727d45e712636f033b 229 SMART SM00448 6 117 2.5E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1137 295bf27c7f8a10727d45e712636f033b 229 SMART SM00862 151 225 3.3E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_1137 295bf27c7f8a10727d45e712636f033b 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 225 2.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_1137 295bf27c7f8a10727d45e712636f033b 229 SUPERFAMILY SSF52172 3 128 5.98E-40 T 14-10-2018 IPR011006 CheY-like superfamily VS_1137 295bf27c7f8a10727d45e712636f033b 229 Gene3D G3DSA:1.10.10.10 127 229 9.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 PIRSF PIRSF005962 5 402 1.2E-117 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 Pfam PF01546 Peptidase family M20/M25/M40 79 395 3.5E-30 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 Pfam PF07687 Peptidase dimerisation domain 196 289 6.2E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 387 1.6E-94 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 Gene3D G3DSA:3.30.70.360 192 307 2.8E-121 T 14-10-2018 VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 Gene3D G3DSA:3.40.630.10 21 384 2.8E-121 T 14-10-2018 VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 SUPERFAMILY SSF53187 13 399 7.38E-83 T 14-10-2018 VS_II0051 5e3cff16fd2e01d966a4638c0e38bc00 403 SUPERFAMILY SSF55031 196 303 9.68E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.097 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 Gene3D G3DSA:3.30.360.10 130 316 9.3E-151 T 14-10-2018 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 SUPERFAMILY SSF51735 5 159 1.78E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.7E-130 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 9.4E-60 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 PIRSF PIRSF000148 4 337 7.1E-133 T 14-10-2018 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 1.1E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 SUPERFAMILY SSF55347 131 320 1.01E-76 T 14-10-2018 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 Gene3D G3DSA:3.40.50.720 7 330 9.3E-151 T 14-10-2018 VS_0901 4b799f29d6a048f6cf8f1290c74e3724 337 SMART SM00859 6 121 9.2E-38 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 SUPERFAMILY SSF56784 5 224 1.6E-58 T 14-10-2018 IPR036412 HAD-like superfamily VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 8.1E-41 T 14-10-2018 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 194 4.6E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 9.8E-58 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 Gene3D G3DSA:3.40.50.1000 9 216 2.6E-63 T 14-10-2018 IPR023214 HAD superfamily VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 2.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 2.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 2.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 2.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 2.6E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 34.109 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 89 193 2.0E-15 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VS_2867 e7f87a7800ecf638d514e3d737c60b0a 228 Gene3D G3DSA:1.10.150.240 21 94 2.6E-63 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.1E-291 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 SUPERFAMILY SSF109604 352 488 8.63E-12 T 14-10-2018 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 Pfam PF05746 DALR anticodon binding domain 580 677 3.5E-10 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 7.6E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 7.6E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 7.6E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 7.6E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 7.6E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 1.2E-204 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_0032 c99e0149708dcbf0f3e0cc67505bc3d5 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.988 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VS_1872 163a4430ba1e2e281bbc88734070ffe8 112 PIRSF PIRSF028744 3 110 2.2E-20 T 14-10-2018 IPR014056 Addiction module killer protein, predicted VS_1872 163a4430ba1e2e281bbc88734070ffe8 112 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 14 104 3.1E-19 T 14-10-2018 IPR014056 Addiction module killer protein, predicted VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 Pfam PF00773 RNB domain 277 604 2.9E-108 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 SUPERFAMILY SSF50249 155 253 6.28E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 ProSitePatterns PS01175 Ribonuclease II family signature. 572 596 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 SUPERFAMILY SSF50249 661 750 8.9E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 81 742 5.6E-254 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 Pfam PF00575 S1 RNA binding domain 660 740 7.2E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 Hamap MF_01895 Ribonuclease R [rnr]. 52 743 58.421 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 SUPERFAMILY SSF50249 81 164 9.93E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 SMART SM00955 277 605 2.6E-184 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 Pfam PF08461 Ribonuclease R winged-helix domain 37 97 1.4E-9 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 SMART SM00316 660 743 3.2E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 SMART SM00357 100 162 1.4E-11 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 Gene3D G3DSA:2.40.50.140 87 164 7.6E-13 T 14-10-2018 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 Gene3D G3DSA:2.40.50.140 663 775 5.5E-25 T 14-10-2018 VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 Pfam PF08206 Ribonuclease B OB domain 101 161 1.1E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 SUPERFAMILY SSF50249 237 660 1.03E-142 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0278 c1fd4241e6c74b2b0bd7b4d48c31e51e 833 TIGRFAM TIGR02063 RNase_R: ribonuclease R 33 743 3.7E-270 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 Gene3D G3DSA:3.40.47.10 261 414 4.6E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 SUPERFAMILY SSF53901 4 252 1.48E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 Gene3D G3DSA:3.40.47.10 1 255 1.7E-91 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 1.6E-188 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.6E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 PIRSF PIRSF000447 1 414 6.4E-199 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 4.0E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 SUPERFAMILY SSF53901 215 413 2.46E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_1026 a68f9b85c75fb2dbc034766e5390da05 414 SMART SM00825 Beta-ketoacyl synthase 6 414 2.3E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 2.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 2.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 183 5.7E-34 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 SMART SM00342 212 292 3.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 Pfam PF12833 Helix-turn-helix domain 218 293 2.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 SUPERFAMILY SSF46689 195 246 1.46E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 SUPERFAMILY SSF46689 248 293 1.4E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 249 291 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II0536 803c34ebeea4356cdc83d7c58ab20fd3 294 Gene3D G3DSA:1.10.10.60 191 294 4.2E-28 T 14-10-2018 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Gene3D G3DSA:3.20.20.70 286 648 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 SUPERFAMILY SSF51395 290 1046 5.7E-250 T 14-10-2018 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Pfam PF01645 Conserved region in glutamate synthase 649 1012 4.2E-153 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Pfam PF00310 Glutamine amidotransferases class-II 59 281 1.2E-102 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Gene3D G3DSA:3.20.20.70 339 1027 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Pfam PF04898 Glutamate synthase central domain 313 593 1.3E-100 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 SUPERFAMILY SSF69336 1068 1320 7.32E-87 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Gene3D G3DSA:3.60.20.10 60 401 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Gene3D G3DSA:2.160.20.60 1054 1323 1.8E-100 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 SUPERFAMILY SSF56235 58 285 3.86E-85 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0471 4854b22869a7a8b362b24377f50ecb87 1342 Pfam PF01493 GXGXG motif 1091 1273 4.1E-72 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VS_0721 d14be08db84c55f9d092fa902b00e05c 296 SMART SM00116 145 193 0.47 T 14-10-2018 IPR000644 CBS domain VS_0721 d14be08db84c55f9d092fa902b00e05c 296 SMART SM00116 82 131 0.0024 T 14-10-2018 IPR000644 CBS domain VS_0721 d14be08db84c55f9d092fa902b00e05c 296 SMART SM01091 209 287 2.2E-30 T 14-10-2018 IPR005170 Transporter-associated domain VS_0721 d14be08db84c55f9d092fa902b00e05c 296 SUPERFAMILY SSF56176 204 286 4.36E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VS_0721 d14be08db84c55f9d092fa902b00e05c 296 Gene3D G3DSA:3.30.465.10 202 296 1.4E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VS_0721 d14be08db84c55f9d092fa902b00e05c 296 Gene3D G3DSA:3.10.580.10 55 201 1.1E-53 T 14-10-2018 VS_0721 d14be08db84c55f9d092fa902b00e05c 296 Pfam PF00571 CBS domain 73 130 1.7E-8 T 14-10-2018 IPR000644 CBS domain VS_0721 d14be08db84c55f9d092fa902b00e05c 296 Pfam PF00571 CBS domain 143 193 2.5E-6 T 14-10-2018 IPR000644 CBS domain VS_0721 d14be08db84c55f9d092fa902b00e05c 296 Pfam PF03471 Transporter associated domain 210 285 1.6E-21 T 14-10-2018 IPR005170 Transporter-associated domain VS_0721 d14be08db84c55f9d092fa902b00e05c 296 SUPERFAMILY SSF54631 63 204 4.64E-33 T 14-10-2018 VS_1101 baff39f8d47746c36448cca7ca3f099a 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 53.975 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VS_1101 baff39f8d47746c36448cca7ca3f099a 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.2E-146 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VS_1101 baff39f8d47746c36448cca7ca3f099a 323 Gene3D G3DSA:3.40.50.150 86 295 1.5E-22 T 14-10-2018 VS_1101 baff39f8d47746c36448cca7ca3f099a 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.7E-169 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like VS_1101 baff39f8d47746c36448cca7ca3f099a 323 SUPERFAMILY SSF53335 91 323 1.66E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 Gene3D G3DSA:1.10.10.10 4 88 3.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 Pfam PF03466 LysR substrate binding domain 126 293 3.9E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 Gene3D G3DSA:3.40.190.10 90 293 5.5E-39 T 14-10-2018 VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 Gene3D G3DSA:3.40.190.10 170 268 5.5E-39 T 14-10-2018 VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 SUPERFAMILY SSF46785 5 86 6.35E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2097 999ab2be3107f1c7adb6607e7c00c86f 311 SUPERFAMILY SSF53850 90 294 4.34E-32 T 14-10-2018 VS_2012 d8d00477a0f06ee23473e2640a5cb3c8 225 Gene3D G3DSA:3.40.50.620 31 168 1.3E-29 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2012 d8d00477a0f06ee23473e2640a5cb3c8 225 Pfam PF02698 DUF218 domain 40 162 1.9E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VS_II1510 d9984f658a536dd604c8f98b6aaa1253 683 ProSitePatterns PS00455 Putative AMP-binding domain signature. 304 315 - T 14-10-2018 IPR020845 AMP-binding, conserved site VS_II1510 d9984f658a536dd604c8f98b6aaa1253 683 Gene3D G3DSA:3.40.50.12780 78 554 2.4E-52 T 14-10-2018 VS_II1510 d9984f658a536dd604c8f98b6aaa1253 683 Pfam PF00501 AMP-binding enzyme 113 558 1.6E-43 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_II1510 d9984f658a536dd604c8f98b6aaa1253 683 Gene3D G3DSA:3.30.300.30 559 683 3.9E-14 T 14-10-2018 VS_II1510 d9984f658a536dd604c8f98b6aaa1253 683 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 4 675 4.4E-228 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VS_II1510 d9984f658a536dd604c8f98b6aaa1253 683 SUPERFAMILY SSF56801 40 659 1.07E-116 T 14-10-2018 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 1.3E-106 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 SUPERFAMILY SSF51905 4 383 7.38E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0725 b6afb9375c60bebbf0570982f29572b5 391 Gene3D G3DSA:3.50.50.60 5 335 2.3E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0725 b6afb9375c60bebbf0570982f29572b5 391 Pfam PF01494 FAD binding domain 4 75 8.8E-6 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 Pfam PF01494 FAD binding domain 147 316 2.4E-22 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 Gene3D G3DSA:3.30.9.50 80 274 2.3E-95 T 14-10-2018 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 3.5E-20 T 14-10-2018 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 3.5E-20 T 14-10-2018 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.5E-20 T 14-10-2018 VS_0725 b6afb9375c60bebbf0570982f29572b5 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.5E-20 T 14-10-2018 VS_1919 c6ddb24f7acea556b2dadc7e7d5aaad6 518 SUPERFAMILY SSF141523 294 460 6.67E-19 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VS_1919 c6ddb24f7acea556b2dadc7e7d5aaad6 518 Gene3D G3DSA:2.40.440.10 241 501 1.2E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VS_1919 c6ddb24f7acea556b2dadc7e7d5aaad6 518 SUPERFAMILY SSF47090 203 276 7.06E-11 T 14-10-2018 IPR036365 PGBD-like superfamily VS_1919 c6ddb24f7acea556b2dadc7e7d5aaad6 518 Pfam PF01471 Putative peptidoglycan binding domain 236 267 9.8E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like VS_1919 c6ddb24f7acea556b2dadc7e7d5aaad6 518 Pfam PF03734 L,D-transpeptidase catalytic domain 295 462 1.6E-30 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Pfam PF00308 Bacterial dnaA protein 139 355 1.1E-97 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Pfam PF11638 DnaA N-terminal domain 4 65 1.5E-19 T 14-10-2018 IPR024633 DnaA N-terminal domain VS_0010 ce7af7c015abb18ba9bced39ed310304 473 SMART SM00760 381 450 3.4E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Gene3D G3DSA:1.10.1750.10 380 473 4.4E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 471 1.3E-186 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Gene3D G3DSA:3.30.300.180 2 119 1.8E-39 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily VS_0010 ce7af7c015abb18ba9bced39ed310304 473 SUPERFAMILY SSF52540 138 349 1.17E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 472 34.357 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Gene3D G3DSA:1.10.8.60 304 374 1.6E-24 T 14-10-2018 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 SUPERFAMILY SSF48295 369 472 1.31E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 ProSitePatterns PS01008 DnaA protein signature. 431 450 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 382 450 1.8E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 171 191 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VS_0010 ce7af7c015abb18ba9bced39ed310304 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 203 217 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VS_0010 ce7af7c015abb18ba9bced39ed310304 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 431 450 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VS_0010 ce7af7c015abb18ba9bced39ed310304 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 235 249 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VS_0010 ce7af7c015abb18ba9bced39ed310304 473 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 269 296 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VS_0010 ce7af7c015abb18ba9bced39ed310304 473 Gene3D G3DSA:3.40.50.300 123 302 2.3E-49 T 14-10-2018 VS_0010 ce7af7c015abb18ba9bced39ed310304 473 SMART SM00382 170 383 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 Gene3D G3DSA:3.30.450.20 162 283 3.5E-14 T 14-10-2018 VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 SUPERFAMILY SSF58104 329 638 6.28E-78 T 14-10-2018 VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 SMART SM00283 376 637 1.7E-86 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 SMART SM00304 307 361 2.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 SMART SM00304 396 463 71.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 Pfam PF00672 HAMP domain 308 357 7.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 604 2.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0216 61240353a5cda06b66f7ea3a380243e2 638 Gene3D G3DSA:1.10.287.950 306 638 5.5E-75 T 14-10-2018 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 Gene3D G3DSA:3.40.605.10 554 1041 5.3E-148 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 SUPERFAMILY SSF51730 189 538 9.02E-111 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 845 856 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 SUPERFAMILY SSF81935 19 188 1.44E-63 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 533 1042 1.2E-247 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 Pfam PF00171 Aldehyde dehydrogenase family 584 1042 2.1E-119 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 Gene3D G3DSA:3.20.20.220 144 531 2.6E-128 T 14-10-2018 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 SUPERFAMILY SSF53720 561 1042 2.36E-126 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 PIRSF PIRSF000197 4 1051 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 Pfam PF01619 Proline dehydrogenase 196 496 1.4E-91 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 Gene3D G3DSA:3.40.309.10 820 1012 5.3E-148 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_II0019 2ddb0669f85983f502c64aee82958f6a 1051 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 186 1.7E-46 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 Pfam PF00849 RNA pseudouridylate synthase 70 200 9.6E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 SUPERFAMILY SSF55120 69 233 1.12E-40 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 SUPERFAMILY SSF55174 10 91 5.76E-11 T 14-10-2018 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 Gene3D G3DSA:3.10.290.10 8 70 4.1E-12 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 74 230 1.9E-40 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 SMART SM00363 10 64 0.0022 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 Gene3D G3DSA:3.30.70.1560 136 217 1.0E-50 T 14-10-2018 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 Pfam PF01479 S4 domain 10 53 1.0E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_1601 2b8294ed19585072e470cc4f38e26a24 241 Gene3D G3DSA:3.30.70.580 71 233 1.0E-50 T 14-10-2018 VS_0075 5be12a4c38965d045ad2b580da2b75a9 517 Gene3D G3DSA:3.40.190.10 32 278 2.8E-121 T 14-10-2018 VS_0075 5be12a4c38965d045ad2b580da2b75a9 517 PIRSF PIRSF002741 20 513 5.7E-92 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_0075 5be12a4c38965d045ad2b580da2b75a9 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VS_0075 5be12a4c38965d045ad2b580da2b75a9 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 9.3E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_0075 5be12a4c38965d045ad2b580da2b75a9 517 Gene3D G3DSA:3.10.105.10 279 494 2.8E-121 T 14-10-2018 VS_0075 5be12a4c38965d045ad2b580da2b75a9 517 Gene3D G3DSA:3.90.76.10 57 165 2.8E-121 T 14-10-2018 VS_0075 5be12a4c38965d045ad2b580da2b75a9 517 SUPERFAMILY SSF53850 26 516 4.34E-124 T 14-10-2018 VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 Pfam PF03459 TOBE domain 310 377 4.0E-17 T 14-10-2018 IPR005116 Transport-associated OB, type 1 VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 Gene3D G3DSA:2.40.50.100 309 377 7.8E-15 T 14-10-2018 VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 22 376 7.5E-140 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 Gene3D G3DSA:3.40.50.300 23 256 2.3E-56 T 14-10-2018 VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 SMART SM00382 42 225 8.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 Pfam PF00005 ABC transporter 35 175 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 SUPERFAMILY SSF50331 253 376 1.08E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_II0725 99186bac3e3d620d020c2f375d2f83bc 385 SUPERFAMILY SSF52540 27 253 2.77E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2723 e51d777aafbee87d045e4255ad5ce382 417 Pfam PF01966 HD domain 170 290 9.0E-16 T 14-10-2018 IPR006674 HD domain VS_2723 e51d777aafbee87d045e4255ad5ce382 417 TIGRFAM TIGR00277 HDIG: HDIG domain 167 259 2.5E-7 T 14-10-2018 IPR006675 HDIG domain VS_2723 e51d777aafbee87d045e4255ad5ce382 417 SUPERFAMILY SSF109604 164 329 1.93E-24 T 14-10-2018 VS_2723 e51d777aafbee87d045e4255ad5ce382 417 SMART SM00471 164 300 3.8E-7 T 14-10-2018 IPR003607 HD/PDEase domain VS_2723 e51d777aafbee87d045e4255ad5ce382 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 134 1.3E-29 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 VS_2723 e51d777aafbee87d045e4255ad5ce382 417 Gene3D G3DSA:1.10.3210.10 15 326 2.7E-53 T 14-10-2018 VS_2649 7864fe33196858f370642bdd27bdff82 522 Pfam PF02378 Phosphotransferase system, EIIC 31 349 5.5E-77 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_2649 7864fe33196858f370642bdd27bdff82 522 Gene3D G3DSA:3.30.1360.60 432 510 8.0E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_2649 7864fe33196858f370642bdd27bdff82 522 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 449 466 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_2649 7864fe33196858f370642bdd27bdff82 522 Pfam PF00367 phosphotransferase system, EIIB 439 471 3.3E-11 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_2649 7864fe33196858f370642bdd27bdff82 522 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 412 496 9.5E-17 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VS_2649 7864fe33196858f370642bdd27bdff82 522 SUPERFAMILY SSF55604 436 509 1.18E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 Gene3D G3DSA:3.30.420.40 194 360 3.1E-112 T 14-10-2018 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 Gene3D G3DSA:3.30.420.40 22 373 3.1E-112 T 14-10-2018 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 Gene3D G3DSA:2.60.34.10 388 518 7.1E-49 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 SUPERFAMILY SSF53067 20 196 3.88E-51 T 14-10-2018 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 359 379 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 465 481 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 328 344 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 PRINTS PR00301 70kDa heat shock protein signature 384 403 2.3E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 Pfam PF00012 Hsp70 protein 21 600 2.0E-191 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.3E-265 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 SUPERFAMILY SSF100934 503 615 1.24E-33 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 Gene3D G3DSA:3.90.640.10 238 310 3.1E-112 T 14-10-2018 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.503 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 SUPERFAMILY SSF53067 200 376 4.37E-49 T 14-10-2018 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 SUPERFAMILY SSF100920 383 536 2.09E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VS_0611 89b0448f3163c807564b2d62ef40bdd8 616 Gene3D G3DSA:1.20.1270.10 519 615 1.2E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VS_2586 e8e0951ec0292984e1354345ee499a9d 373 Gene3D G3DSA:2.40.50.140 296 355 3.7E-31 T 14-10-2018 VS_2586 e8e0951ec0292984e1354345ee499a9d 373 SMART SM00382 29 217 4.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2586 e8e0951ec0292984e1354345ee499a9d 373 Gene3D G3DSA:2.40.50.940 228 364 3.7E-31 T 14-10-2018 VS_2586 e8e0951ec0292984e1354345ee499a9d 373 Pfam PF08402 TOBE domain 289 363 5.3E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VS_2586 e8e0951ec0292984e1354345ee499a9d 373 SUPERFAMILY SSF52540 4 249 5.85E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2586 e8e0951ec0292984e1354345ee499a9d 373 Pfam PF00005 ABC transporter 21 162 4.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2586 e8e0951ec0292984e1354345ee499a9d 373 Gene3D G3DSA:3.40.50.300 3 227 6.6E-60 T 14-10-2018 VS_2586 e8e0951ec0292984e1354345ee499a9d 373 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2586 e8e0951ec0292984e1354345ee499a9d 373 SUPERFAMILY SSF50331 242 371 2.31E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_II1303 244a6eb45621b658174e710d1bb0858b 552 Gene3D G3DSA:1.10.287.950 221 552 4.4E-70 T 14-10-2018 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 SMART SM00283 290 551 2.8E-71 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 SUPERFAMILY SSF58104 243 552 2.75E-71 T 14-10-2018 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 SMART SM00304 221 275 7.5E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 Pfam PF00672 HAMP domain 221 271 6.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 415 4.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 197 217 4.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 4.5E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1303 244a6eb45621b658174e710d1bb0858b 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 517 2.9E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 Pfam PF00067 Cytochrome P450 12 452 1.1E-74 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 397 406 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 SUPERFAMILY SSF48264 8 456 7.33E-93 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 Gene3D G3DSA:1.10.630.10 3 457 1.5E-95 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00385 P450 superfamily signature 404 415 1.8E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00385 P450 superfamily signature 322 333 1.8E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00385 P450 superfamily signature 395 404 1.8E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00385 P450 superfamily signature 271 288 1.8E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00463 E-class P450 group I signature 321 339 7.4E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00463 E-class P450 group I signature 404 427 7.4E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00463 E-class P450 group I signature 35 54 7.4E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00463 E-class P450 group I signature 361 385 7.4E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00463 E-class P450 group I signature 394 404 7.4E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00463 E-class P450 group I signature 260 277 7.4E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_1891 bfb3cdb22e390baa44cb613781aca25d 457 PRINTS PR00463 E-class P450 group I signature 150 168 7.4E-25 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 VS_2396 6c4fe8f3849003d71c9c0611d2202f2c 395 PIRSF PIRSF028774 33 394 3.9E-187 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VS_2396 6c4fe8f3849003d71c9c0611d2202f2c 395 Gene3D G3DSA:3.40.50.150 210 390 1.5E-51 T 14-10-2018 VS_2396 6c4fe8f3849003d71c9c0611d2202f2c 395 Pfam PF01728 FtsJ-like methyltransferase 220 283 4.9E-5 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VS_2396 6c4fe8f3849003d71c9c0611d2202f2c 395 Gene3D G3DSA:3.30.2300.20 112 209 5.0E-39 T 14-10-2018 VS_2396 6c4fe8f3849003d71c9c0611d2202f2c 395 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 33 389 83.124 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VS_2396 6c4fe8f3849003d71c9c0611d2202f2c 395 SUPERFAMILY SSF53335 218 313 3.33E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2396 6c4fe8f3849003d71c9c0611d2202f2c 395 Gene3D G3DSA:3.30.70.2810 33 111 1.7E-31 T 14-10-2018 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 SUPERFAMILY SSF50156 237 323 1.48E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 8.7E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 Gene3D G3DSA:3.90.226.10 325 545 4.3E-58 T 14-10-2018 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 663 2.1E-37 T 14-10-2018 IPR020992 Tail specific protease, C-terminal VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 Pfam PF08180 B melanoma antigen family 9 36 9.0E-14 T 14-10-2018 IPR012530 B melanoma antigen-like VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 SMART SM00245 326 527 1.2E-69 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 3.3E-115 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 SUPERFAMILY SSF52096 166 538 1.82E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 SMART SM00228 246 323 1.7E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 Pfam PF03572 Peptidase family S41 356 525 2.5E-52 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VS_1417 8eb226124a2a504d1a688d2192cb7a1f 664 Gene3D G3DSA:2.30.42.10 236 320 9.6E-12 T 14-10-2018 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 Gene3D G3DSA:1.10.10.1600 433 510 3.8E-30 T 14-10-2018 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 6.1E-172 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 3.0E-24 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 Gene3D G3DSA:3.20.20.140 1 270 1.4E-86 T 14-10-2018 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 1.3E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 SUPERFAMILY SSF89550 5 263 3.73E-10 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 SUPERFAMILY SSF50249 976 1064 1.83E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 SMART SM00481 7 74 2.8E-24 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 Gene3D G3DSA:2.40.50.140 984 1072 1.7E-8 T 14-10-2018 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 Pfam PF02811 PHP domain 8 171 1.0E-39 T 14-10-2018 IPR004013 PHP domain GO:0003824 VS_2337 246a06cb29f840fe9ca05918d8fd225e 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2187 93b355f593db5b401d37b2a1d8f4f662 478 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 14-10-2018 IPR020845 AMP-binding, conserved site VS_2187 93b355f593db5b401d37b2a1d8f4f662 478 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 33 466 4.0E-116 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 VS_2187 93b355f593db5b401d37b2a1d8f4f662 478 Gene3D G3DSA:3.30.300.30 376 455 1.6E-9 T 14-10-2018 VS_2187 93b355f593db5b401d37b2a1d8f4f662 478 Pfam PF00501 AMP-binding enzyme 14 381 3.6E-48 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_2187 93b355f593db5b401d37b2a1d8f4f662 478 SUPERFAMILY SSF56801 5 455 4.97E-77 T 14-10-2018 VS_2187 93b355f593db5b401d37b2a1d8f4f662 478 Gene3D G3DSA:3.40.50.12780 10 374 1.2E-58 T 14-10-2018 VS_0599 6497793fc0480faae935c81f59a26f84 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 4.7E-179 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VS_0599 6497793fc0480faae935c81f59a26f84 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.279 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VS_0599 6497793fc0480faae935c81f59a26f84 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 1.7E-187 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VS_0599 6497793fc0480faae935c81f59a26f84 378 Gene3D G3DSA:3.20.20.105 1 370 3.1E-174 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VS_0599 6497793fc0480faae935c81f59a26f84 378 SUPERFAMILY SSF51713 3 367 4.19E-164 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VS_0599 6497793fc0480faae935c81f59a26f84 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 4.3E-96 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 Gene3D G3DSA:3.30.70.920 53 145 6.9E-22 T 14-10-2018 VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 Gene3D G3DSA:1.10.10.10 1 52 2.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.5E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.5E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.5E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 SMART SM00344 1 110 3.8E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.8E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.4E-20 T 14-10-2018 VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 SUPERFAMILY SSF46785 1 60 3.04E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0580 e1fd72393c02ab8e6c324afc44f345b6 152 SUPERFAMILY SSF54909 63 149 1.13E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_0273 779646a1919de76f6872fbf8c5377574 325 SUPERFAMILY SSF117892 55 222 2.09E-23 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VS_0273 779646a1919de76f6872fbf8c5377574 325 Gene3D G3DSA:3.30.479.30 52 219 1.1E-13 T 14-10-2018 VS_0273 779646a1919de76f6872fbf8c5377574 325 Pfam PF01145 SPFH domain / Band 7 family 22 232 3.8E-27 T 14-10-2018 IPR001107 Band 7 domain VS_0273 779646a1919de76f6872fbf8c5377574 325 TIGRFAM TIGR01932 hflC: HflC protein 1 317 2.2E-132 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VS_0273 779646a1919de76f6872fbf8c5377574 325 PIRSF PIRSF005651 1 324 6.0E-94 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VS_0273 779646a1919de76f6872fbf8c5377574 325 SMART SM00244 18 217 8.4E-45 T 14-10-2018 IPR001107 Band 7 domain VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 43.478 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 TIGRFAM TIGR01078 arcA: arginine deiminase 5 407 1.1E-160 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 SUPERFAMILY SSF55909 3 407 6.48E-129 T 14-10-2018 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 PIRSF PIRSF006356 1 407 1.5E-148 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 Pfam PF02274 Amidinotransferase 18 404 4.7E-109 T 14-10-2018 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 1.6E-43 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 1.6E-43 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 1.6E-43 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 1.6E-43 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 1.6E-43 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 1.6E-43 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 Gene3D G3DSA:3.75.10.10 6 404 4.3E-147 T 14-10-2018 VS_2924 fd3013693d4cc3f30f172e1a36d0040b 407 Gene3D G3DSA:1.10.3930.10 68 148 4.3E-147 T 14-10-2018 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 SMART SM00798 137 462 2.5E-218 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 SMART SM00851 19 132 8.6E-60 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 Gene3D G3DSA:3.40.50.1380 1 200 1.7E-87 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 PIRSF PIRSF000414 1 530 9.0E-229 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 Gene3D G3DSA:3.40.140.20 394 530 3.4E-60 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 SUPERFAMILY SSF53927 222 530 2.21E-130 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 Gene3D G3DSA:3.40.140.20 219 375 1.1E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 7.5E-120 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 Pfam PF02142 MGS-like domain 19 132 9.0E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 1.3E-259 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.823 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2951 bf9cc364333d595b6b8cd03f4d7eeef9 530 SUPERFAMILY SSF52335 7 197 1.28E-71 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VS_II0761 483249c1861141d6345ed571b543a49a 635 SMART SM00267 192 363 7.2E-6 T 14-10-2018 IPR000160 GGDEF domain VS_II0761 483249c1861141d6345ed571b543a49a 635 Gene3D G3DSA:3.30.70.270 201 376 1.1E-18 T 14-10-2018 VS_II0761 483249c1861141d6345ed571b543a49a 635 Pfam PF13185 GAF domain 20 143 1.7E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_II0761 483249c1861141d6345ed571b543a49a 635 SMART SM00052 373 618 2.4E-94 T 14-10-2018 IPR001633 EAL domain VS_II0761 483249c1861141d6345ed571b543a49a 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 358 1.1E-15 T 14-10-2018 IPR000160 GGDEF domain VS_II0761 483249c1861141d6345ed571b543a49a 635 SMART SM00065 14 161 4.0E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_II0761 483249c1861141d6345ed571b543a49a 635 SUPERFAMILY SSF55781 16 163 7.2E-20 T 14-10-2018 VS_II0761 483249c1861141d6345ed571b543a49a 635 Pfam PF00563 EAL domain 381 613 9.1E-67 T 14-10-2018 IPR001633 EAL domain VS_II0761 483249c1861141d6345ed571b543a49a 635 Gene3D G3DSA:3.30.450.40 8 165 1.2E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_II0761 483249c1861141d6345ed571b543a49a 635 Gene3D G3DSA:3.20.20.450 377 627 7.9E-87 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0761 483249c1861141d6345ed571b543a49a 635 SUPERFAMILY SSF141868 379 628 3.79E-83 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0761 483249c1861141d6345ed571b543a49a 635 SUPERFAMILY SSF55073 209 361 3.61E-14 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1876 54060f6042a599e2c098a1d9f80465a5 131 Gene3D G3DSA:3.90.79.10 1 129 1.1E-21 T 14-10-2018 VS_1876 54060f6042a599e2c098a1d9f80465a5 131 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_1876 54060f6042a599e2c098a1d9f80465a5 131 Pfam PF00293 NUDIX domain 6 111 2.8E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_1876 54060f6042a599e2c098a1d9f80465a5 131 SUPERFAMILY SSF55811 5 112 6.91E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 Gene3D G3DSA:3.40.50.80 111 250 2.9E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 SUPERFAMILY SSF52343 116 247 6.55E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 SUPERFAMILY SSF63380 7 109 8.98E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 284 350 5.1E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 309 317 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 SUPERFAMILY SSF54292 263 359 9.44E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 Gene3D G3DSA:3.10.20.30 251 359 8.6E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 Pfam PF00175 Oxidoreductase NAD-binding domain 122 224 1.2E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 Gene3D G3DSA:2.40.30.10 7 108 2.2E-23 T 14-10-2018 VS_II0345 a48b8f00b04b37e1b76b1aa23d311b67 359 Pfam PF00970 Oxidoreductase FAD-binding domain 19 107 2.9E-12 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VS_2809 ac0d3c33839f80020ccb96d07be1e8b0 129 SUPERFAMILY SSF53137 14 129 1.77E-47 T 14-10-2018 VS_2809 ac0d3c33839f80020ccb96d07be1e8b0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.358 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VS_2809 ac0d3c33839f80020ccb96d07be1e8b0 129 PIRSF PIRSF002131 1 129 4.5E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VS_2809 ac0d3c33839f80020ccb96d07be1e8b0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site VS_2809 ac0d3c33839f80020ccb96d07be1e8b0 129 Gene3D G3DSA:3.30.420.80 1 129 4.7E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VS_2809 ac0d3c33839f80020ccb96d07be1e8b0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.1E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VS_2809 ac0d3c33839f80020ccb96d07be1e8b0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.7E-54 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_II1491 5b15cf84e5f81baec5f23b4f1883c33a 432 Pfam PF12704 MacB-like periplasmic core domain 31 257 1.5E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VS_II1491 5b15cf84e5f81baec5f23b4f1883c33a 432 Pfam PF02687 FtsX-like permease family 325 421 6.3E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_2772 5efe1b14ff0a89792383da1918456eeb 144 Pfam PF10973 Protein of unknown function (DUF2799) 54 137 3.4E-20 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VS_II0329 50465dc5c4b5508ccdc7b005011c9746 324 Gene3D G3DSA:1.10.4160.10 3 309 1.1E-31 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily VS_II0329 50465dc5c4b5508ccdc7b005011c9746 324 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 291 1.0E-46 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VS_1993 c352e683b3037878d6cda19fac788183 540 Gene3D G3DSA:3.90.76.10 44 216 2.7E-143 T 14-10-2018 VS_1993 c352e683b3037878d6cda19fac788183 540 Gene3D G3DSA:3.10.105.10 296 514 2.7E-143 T 14-10-2018 VS_1993 c352e683b3037878d6cda19fac788183 540 SUPERFAMILY SSF53850 34 535 1.27E-127 T 14-10-2018 VS_1993 c352e683b3037878d6cda19fac788183 540 Gene3D G3DSA:3.40.190.10 217 526 2.7E-143 T 14-10-2018 VS_1993 c352e683b3037878d6cda19fac788183 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 2.5E-82 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_1993 c352e683b3037878d6cda19fac788183 540 PIRSF PIRSF002741 1 539 1.3E-92 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_0358 066541a3ef6b94542091186203aa5220 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VS_0358 066541a3ef6b94542091186203aa5220 311 PIRSF PIRSF000102 1 309 1.0E-61 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VS_0358 066541a3ef6b94542091186203aa5220 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 2.0E-127 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 VS_0358 066541a3ef6b94542091186203aa5220 311 SUPERFAMILY SSF51735 1 145 3.17E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0358 066541a3ef6b94542091186203aa5220 311 Gene3D G3DSA:3.90.110.10 147 311 5.0E-54 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VS_0358 066541a3ef6b94542091186203aa5220 311 SUPERFAMILY SSF56327 147 309 9.88E-43 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VS_0358 066541a3ef6b94542091186203aa5220 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 56.966 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VS_0358 066541a3ef6b94542091186203aa5220 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 5.6E-47 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_0358 066541a3ef6b94542091186203aa5220 311 Gene3D G3DSA:3.40.50.720 1 146 1.5E-65 T 14-10-2018 VS_0358 066541a3ef6b94542091186203aa5220 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 4.5E-49 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VS_1393 360f048df0061061d75facf133d58689 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 431 5.3E-116 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VS_1393 360f048df0061061d75facf133d58689 437 Pfam PF02321 Outer membrane efflux protein 234 417 6.2E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1393 360f048df0061061d75facf133d58689 437 Pfam PF02321 Outer membrane efflux protein 26 213 2.2E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1393 360f048df0061061d75facf133d58689 437 Gene3D G3DSA:1.20.1600.10 24 427 4.7E-80 T 14-10-2018 VS_1393 360f048df0061061d75facf133d58689 437 SUPERFAMILY SSF56954 7 420 1.44E-85 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 Gene3D G3DSA:3.30.450.40 1 161 1.4E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_0524 4bf28ccd52367028e726d385184f552f 749 SUPERFAMILY SSF51621 423 715 4.97E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_0524 4bf28ccd52367028e726d385184f552f 749 Pfam PF01590 GAF domain 17 152 1.1E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_0524 4bf28ccd52367028e726d385184f552f 749 SUPERFAMILY SSF47831 199 312 4.84E-27 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VS_0524 4bf28ccd52367028e726d385184f552f 749 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 173 728 1.8E-134 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VS_0524 4bf28ccd52367028e726d385184f552f 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.7E-23 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 460 479 2.7E-23 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.7E-23 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.7E-23 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VS_0524 4bf28ccd52367028e726d385184f552f 749 SUPERFAMILY SSF52009 294 411 2.49E-26 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VS_0524 4bf28ccd52367028e726d385184f552f 749 SUPERFAMILY SSF55781 2 158 9.6E-31 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 Gene3D G3DSA:1.10.274.10 191 314 2.2E-59 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VS_0524 4bf28ccd52367028e726d385184f552f 749 Gene3D G3DSA:3.20.20.60 401 741 1.4E-102 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 SMART SM00065 17 163 1.2E-21 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_0524 4bf28ccd52367028e726d385184f552f 749 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 392 2.2E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VS_0524 4bf28ccd52367028e726d385184f552f 749 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 352 363 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VS_0524 4bf28ccd52367028e726d385184f552f 749 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 424 707 1.4E-94 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VS_0524 4bf28ccd52367028e726d385184f552f 749 Gene3D G3DSA:3.50.30.10 174 400 2.2E-59 T 14-10-2018 VS_0524 4bf28ccd52367028e726d385184f552f 749 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 295 2.4E-23 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 Pfam PF00196 Bacterial regulatory proteins, luxR family 843 897 1.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 SMART SM00421 841 898 1.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 858 1.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 874 886 1.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 874 1.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 6 907 37.0 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 SUPERFAMILY SSF46894 835 899 1.33E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 SUPERFAMILY SSF52540 14 232 5.61E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 Gene3D G3DSA:3.40.50.300 19 168 2.5E-7 T 14-10-2018 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 Gene3D G3DSA:1.10.10.10 834 905 3.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 SUPERFAMILY SSF48452 447 810 8.97E-160 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 ProSitePatterns PS00622 LuxR-type HTH domain signature. 858 885 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0183 20b13ed13edfed130c94d3e72814fa99 907 Gene3D G3DSA:1.25.40.10 449 815 5.3E-81 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0504 5833470586c3f2bcabaf9d126027509a 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.2E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 1.5E-160 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0504 5833470586c3f2bcabaf9d126027509a 476 Pfam PF01235 Sodium:alanine symporter family 49 452 3.1E-161 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0511 7a35a7a1b4e118b893dc41d17e7a1255 173 Gene3D G3DSA:3.40.50.360 1 173 9.3E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0511 7a35a7a1b4e118b893dc41d17e7a1255 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 1.1E-64 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VS_0511 7a35a7a1b4e118b893dc41d17e7a1255 173 PIRSF PIRSF038996 1 172 1.3E-55 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VS_0511 7a35a7a1b4e118b893dc41d17e7a1255 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VS_0511 7a35a7a1b4e118b893dc41d17e7a1255 173 SUPERFAMILY SSF52218 1 166 2.68E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0511 7a35a7a1b4e118b893dc41d17e7a1255 173 Pfam PF00258 Flavodoxin 5 161 1.2E-26 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VS_II1338 789c101678169c2b2e2d811821aabfbc 283 Pfam PF03466 LysR substrate binding domain 94 265 2.9E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1338 789c101678169c2b2e2d811821aabfbc 283 SUPERFAMILY SSF53850 94 276 8.87E-21 T 14-10-2018 VS_II1338 789c101678169c2b2e2d811821aabfbc 283 Gene3D G3DSA:3.40.190.10 99 260 1.7E-38 T 14-10-2018 VS_II1338 789c101678169c2b2e2d811821aabfbc 283 Gene3D G3DSA:1.10.10.10 7 96 6.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1338 789c101678169c2b2e2d811821aabfbc 283 Gene3D G3DSA:3.40.190.10 165 255 1.7E-38 T 14-10-2018 VS_II1338 789c101678169c2b2e2d811821aabfbc 283 SUPERFAMILY SSF46785 6 88 1.31E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1338 789c101678169c2b2e2d811821aabfbc 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 7.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1338 789c101678169c2b2e2d811821aabfbc 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 7.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1338 789c101678169c2b2e2d811821aabfbc 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 7.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1338 789c101678169c2b2e2d811821aabfbc 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2262 2e8610cc909d74dc1276b572b31629c9 404 Gene3D G3DSA:3.30.420.40 207 376 2.0E-93 T 14-10-2018 VS_2262 2e8610cc909d74dc1276b572b31629c9 404 SUPERFAMILY SSF53067 85 391 1.08E-54 T 14-10-2018 VS_2262 2e8610cc909d74dc1276b572b31629c9 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2262 2e8610cc909d74dc1276b572b31629c9 404 Gene3D G3DSA:3.30.420.40 90 383 2.0E-93 T 14-10-2018 VS_2262 2e8610cc909d74dc1276b572b31629c9 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VS_2262 2e8610cc909d74dc1276b572b31629c9 404 SUPERFAMILY SSF46785 11 75 7.12E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2262 2e8610cc909d74dc1276b572b31629c9 404 Pfam PF00480 ROK family 86 390 1.8E-72 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 SUPERFAMILY SSF48452 169 292 1.14E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 SMART SM00028 127 160 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 SMART SM00028 47 80 40.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 SMART SM00028 247 280 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 SMART SM00028 207 240 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 SUPERFAMILY SSF48452 42 185 7.59E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 Gene3D G3DSA:1.25.40.10 1 170 7.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0194 7f05e153fa3e3690bfe386ddc6f7510b 489 Gene3D G3DSA:1.25.40.10 171 318 4.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 Gene3D G3DSA:3.30.470.20 193 356 1.1E-57 T 14-10-2018 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 8.7E-6 T 14-10-2018 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 8.7E-6 T 14-10-2018 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 8.7E-6 T 14-10-2018 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 SUPERFAMILY SSF56059 1 383 1.65E-107 T 14-10-2018 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 SUPERFAMILY SSF51621 461 786 1.94E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 Gene3D G3DSA:3.50.30.10 358 476 3.1E-41 T 14-10-2018 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 PIRSF PIRSF000854 1 790 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 6.8E-63 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 786 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 1.5E-119 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 Gene3D G3DSA:3.30.1490.20 1 192 2.7E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 5.4E-27 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 SUPERFAMILY SSF52009 348 466 8.11E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VS_II1225 2c345b53ef32ef0fe9457f4f75a0cdc6 790 Gene3D G3DSA:3.20.20.60 477 787 6.1E-105 T 14-10-2018 VS_II0940 e7a4ee8b7cd8aebacfa585fe86ef290a 155 Hamap MF_01661 D-ribose pyranase [rbsD]. 17 155 32.605 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 VS_II0940 e7a4ee8b7cd8aebacfa585fe86ef290a 155 Pfam PF05025 RbsD / FucU transport protein family 17 154 1.7E-47 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VS_II0940 e7a4ee8b7cd8aebacfa585fe86ef290a 155 SUPERFAMILY SSF102546 17 155 3.66E-44 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VS_II0940 e7a4ee8b7cd8aebacfa585fe86ef290a 155 Gene3D G3DSA:3.40.1650.10 24 151 1.0E-36 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 1.7E-203 T 14-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 Gene3D G3DSA:3.40.640.10 54 313 7.2E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 Gene3D G3DSA:3.90.1150.10 5 405 7.2E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 SUPERFAMILY SSF53383 7 409 7.15E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 Pfam PF00202 Aminotransferase class-III 17 407 2.9E-80 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 412 3.6E-149 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 PIRSF PIRSF000521 175 412 4.2E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 PIRSF PIRSF000521 2 128 1.9E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0067 d7c123b2b2df39cb4af30da35147a5af 421 PIRSF PIRSF000521 121 154 4.6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_0951 baf8e590d25c12cb2b6bd739f19ef223 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.245 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VS_0951 baf8e590d25c12cb2b6bd739f19ef223 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 2.1E-97 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VS_0234 054de0ffcd22b4f6f6e253fb07f7e809 643 SUPERFAMILY SSF51735 280 559 3.78E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0234 054de0ffcd22b4f6f6e253fb07f7e809 643 SUPERFAMILY SSF53335 114 340 2.66E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0234 054de0ffcd22b4f6f6e253fb07f7e809 643 Gene3D G3DSA:3.40.50.720 278 613 1.2E-114 T 14-10-2018 VS_0234 054de0ffcd22b4f6f6e253fb07f7e809 643 Pfam PF13727 CoA-binding domain 69 238 1.8E-8 T 14-10-2018 VS_0234 054de0ffcd22b4f6f6e253fb07f7e809 643 Gene3D G3DSA:3.40.50.720 142 264 8.5E-30 T 14-10-2018 VS_0234 054de0ffcd22b4f6f6e253fb07f7e809 643 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 1.1E-128 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VS_1123 079cd4510f18d57d715a72e9dbce6521 295 Gene3D G3DSA:3.40.50.1980 119 294 5.5E-54 T 14-10-2018 VS_1123 079cd4510f18d57d715a72e9dbce6521 295 SUPERFAMILY SSF53807 5 280 1.33E-36 T 14-10-2018 VS_1123 079cd4510f18d57d715a72e9dbce6521 295 Gene3D G3DSA:3.40.50.1980 3 118 8.2E-25 T 14-10-2018 VS_1123 079cd4510f18d57d715a72e9dbce6521 295 Pfam PF01497 Periplasmic binding protein 69 267 4.3E-16 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_II1466 2eef964d34894df5562ef047a1c2c8a9 443 Gene3D G3DSA:3.90.1150.10 61 412 2.7E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II1466 2eef964d34894df5562ef047a1c2c8a9 443 Gene3D G3DSA:3.40.640.10 95 317 2.7E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II1466 2eef964d34894df5562ef047a1c2c8a9 443 SUPERFAMILY SSF53383 35 421 6.52E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II1466 2eef964d34894df5562ef047a1c2c8a9 443 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 54 420 1.1E-106 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VS_II1466 2eef964d34894df5562ef047a1c2c8a9 443 Pfam PF00155 Aminotransferase class I and II 99 411 9.6E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 Gene3D G3DSA:1.10.10.10 1 86 7.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 SUPERFAMILY SSF53850 88 293 2.17E-38 T 14-10-2018 VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 Pfam PF03466 LysR substrate binding domain 91 289 1.9E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 Gene3D G3DSA:3.40.190.10 88 290 6.4E-49 T 14-10-2018 VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 Gene3D G3DSA:3.40.190.10 168 267 6.4E-49 T 14-10-2018 VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 SUPERFAMILY SSF46785 3 84 1.23E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0340 e7a7fdf7cc8e18dd1a4ffb0dc31dad05 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2100 441dc2bf1c2dcc6ebd6b4eafef997232 329 Gene3D G3DSA:2.40.50.100 71 202 5.2E-18 T 14-10-2018 VS_2100 441dc2bf1c2dcc6ebd6b4eafef997232 329 Pfam PF13533 Biotin-lipoyl like 66 109 5.2E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_2100 441dc2bf1c2dcc6ebd6b4eafef997232 329 Gene3D G3DSA:2.40.30.170 203 249 5.2E-18 T 14-10-2018 VS_2100 441dc2bf1c2dcc6ebd6b4eafef997232 329 SUPERFAMILY SSF111369 69 194 4.84E-6 T 14-10-2018 VS_2100 441dc2bf1c2dcc6ebd6b4eafef997232 329 Gene3D G3DSA:1.10.287.470 104 172 5.2E-18 T 14-10-2018 VS_II1119 e663b7069cf086b68d63c1a046d7f289 202 SUPERFAMILY SSF49785 38 192 2.89E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VS_II1119 e663b7069cf086b68d63c1a046d7f289 202 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 39 189 1.1E-37 T 14-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 Gene3D G3DSA:1.10.3860.10 1 424 8.7E-141 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 SUPERFAMILY SSF118215 9 407 1.96E-121 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 5.3E-130 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 1.8E-48 T 14-10-2018 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.8E-48 T 14-10-2018 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.8E-48 T 14-10-2018 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 1.8E-48 T 14-10-2018 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.8E-48 T 14-10-2018 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 1.8E-48 T 14-10-2018 VS_II0676 af271b5e771f71c3c3f7ecb70f328a11 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 1.8E-48 T 14-10-2018 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 Gene3D G3DSA:1.10.287.130 348 435 4.8E-20 T 14-10-2018 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 Gene3D G3DSA:3.30.565.10 441 600 1.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2207 7a7d248b54abb90dd8d0b08999954745 602 Pfam PF02743 Cache domain 44 227 1.0E-13 T 14-10-2018 IPR033479 Double Cache domain 1 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 SUPERFAMILY SSF55874 438 599 2.88E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2207 7a7d248b54abb90dd8d0b08999954745 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 438 4.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 Gene3D G3DSA:3.30.450.20 42 279 3.5E-81 T 14-10-2018 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 SUPERFAMILY SSF103190 49 186 3.14E-27 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_2207 7a7d248b54abb90dd8d0b08999954745 602 SUPERFAMILY SSF47384 358 437 4.32E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 594 4.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2207 7a7d248b54abb90dd8d0b08999954745 602 SMART SM00388 372 440 1.4E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 SMART SM00387 483 597 1.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2207 7a7d248b54abb90dd8d0b08999954745 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 4.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 Gene3D G3DSA:3.30.450.20 54 175 3.5E-81 T 14-10-2018 VS_2207 7a7d248b54abb90dd8d0b08999954745 602 PIRSF PIRSF036431 1 602 5.0E-183 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 Gene3D G3DSA:3.10.50.40 177 384 4.2E-73 T 14-10-2018 VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 SUPERFAMILY SSF54534 175 273 9.16E-25 T 14-10-2018 VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 Gene3D G3DSA:1.10.4030.10 23 150 5.3E-32 T 14-10-2018 VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 SUPERFAMILY SSF109998 27 198 1.02E-35 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 Gene3D G3DSA:3.10.50.40 281 383 4.2E-73 T 14-10-2018 VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 SUPERFAMILY SSF54534 281 383 4.45E-29 T 14-10-2018 VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 Pfam PF09312 SurA N-terminal domain 27 144 2.0E-42 T 14-10-2018 IPR015391 SurA N-terminal VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 Pfam PF13616 PPIC-type PPIASE domain 168 272 2.0E-21 T 14-10-2018 VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 Pfam PF13616 PPIC-type PPIASE domain 279 381 1.0E-22 T 14-10-2018 VS_0372 8440146a320cdac8f0864bc2d71cbfc9 431 Hamap MF_01183 Chaperone SurA [surA]. 11 426 31.79 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Gene3D G3DSA:1.10.3170.10 171 363 3.0E-156 T 14-10-2018 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 13 1202 22.763 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Pfam PF13361 UvrD-like helicase C-terminal domain 455 829 4.5E-18 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 SUPERFAMILY SSF52980 921 1203 9.12E-84 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Gene3D G3DSA:3.40.50.300 460 865 7.6E-155 T 14-10-2018 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Pfam PF12705 PD-(D/E)XK nuclease superfamily 978 1175 1.3E-6 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 SUPERFAMILY SSF52540 21 841 2.4E-109 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Gene3D G3DSA:3.40.50.300 15 450 3.0E-156 T 14-10-2018 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 15 1201 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Gene3D G3DSA:1.10.486.10 600 748 7.6E-155 T 14-10-2018 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 450 5.3E-59 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VS_0675 f49936aa9e53926b2fd8141a72f03f56 1224 Gene3D G3DSA:3.90.320.10 911 1208 3.3E-101 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 Pfam PF01965 DJ-1/PfpI family 57 155 4.0E-8 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 SUPERFAMILY SSF46689 231 282 2.69E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 SMART SM00342 248 331 1.6E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 285 327 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 Gene3D G3DSA:1.10.10.60 282 337 7.2E-18 T 14-10-2018 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 SUPERFAMILY SSF46689 284 333 1.79E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 SUPERFAMILY SSF52317 20 205 4.58E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 2.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 2.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 Pfam PF12833 Helix-turn-helix domain 255 332 7.9E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 Gene3D G3DSA:3.40.50.880 14 212 3.2E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_II0620 98dcf9a34d66e5891f3e4cd70613c024 339 Gene3D G3DSA:1.10.10.60 224 281 5.0E-9 T 14-10-2018 VS_1845 84c6586406a1eb880fa670fdd0254f8b 401 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 22 387 2.0E-181 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VS_1845 84c6586406a1eb880fa670fdd0254f8b 401 Gene3D G3DSA:1.20.1530.10 16 395 8.9E-145 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VS_1845 84c6586406a1eb880fa670fdd0254f8b 401 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 19 393 23.334 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VS_1845 84c6586406a1eb880fa670fdd0254f8b 401 Pfam PF06965 Na+/H+ antiporter 1 21 387 6.1E-143 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 191 348 7.4E-68 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 SMART SM00846 39 186 1.8E-94 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 158 2.7E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 198 2.7E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 207 223 2.7E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 264 281 2.7E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 304 319 2.7E-45 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 184 191 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 PIRSF PIRSF000149 37 367 4.9E-133 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 39 138 1.2E-39 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 40 360 7.7E-135 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 SUPERFAMILY SSF51735 39 202 6.15E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0932 8ea257b04b62926bf183c8e720ffec55 367 Gene3D G3DSA:3.30.360.10 185 350 1.6E-152 T 14-10-2018 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 Gene3D G3DSA:3.40.50.720 40 362 1.6E-152 T 14-10-2018 VS_0932 8ea257b04b62926bf183c8e720ffec55 367 SUPERFAMILY SSF55347 185 348 1.4E-75 T 14-10-2018 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 356 420 4.0E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 82 141 4.9E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 434 544 8.6E-4 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 22 563 1.6E-281 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Gene3D G3DSA:3.90.480.20 19 418 1.8E-84 T 14-10-2018 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Gene3D G3DSA:3.30.413.10 429 572 2.5E-34 T 14-10-2018 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 SUPERFAMILY SSF56014 432 564 9.03E-32 T 14-10-2018 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 PRINTS PR00397 Sirohaem Fe-binding site signature 433 451 6.5E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 PRINTS PR00397 Sirohaem Fe-binding site signature 482 500 6.5E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 482 498 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 SUPERFAMILY SSF55124 349 425 8.83E-20 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 13 575 57.648 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 176 333 1.3E-46 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 SUPERFAMILY SSF56014 152 347 1.7E-60 T 14-10-2018 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 Gene3D G3DSA:3.30.413.10 144 351 1.8E-84 T 14-10-2018 VS_0300 ef5e3836a5b5fda94b69bbb93950356b 575 SUPERFAMILY SSF55124 17 148 7.69E-26 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 Gene3D G3DSA:3.40.50.300 635 730 5.3E-20 T 14-10-2018 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 Pfam PF13604 AAA domain 264 424 3.0E-30 T 14-10-2018 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 32 739 2.3E-203 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 Gene3D G3DSA:3.40.50.300 480 600 3.3E-24 T 14-10-2018 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 SUPERFAMILY SSF52540 34 475 4.02E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 39 737 48.392 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 SUPERFAMILY SSF52540 389 739 8.85E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 Gene3D G3DSA:1.10.10.1020 25 148 3.7E-17 T 14-10-2018 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 Gene3D G3DSA:3.40.50.300 229 470 1.1E-71 T 14-10-2018 VS_0676 108a7fd1d3aec592c8b82c960ee7bd8b 741 Pfam PF13538 UvrD-like helicase C-terminal domain 668 714 3.7E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain VS_2914 b309b9312a222169b8f4060f6b2643cb 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 297 7.7E-69 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VS_2914 b309b9312a222169b8f4060f6b2643cb 312 Pfam PF01545 Cation efflux family 24 216 5.3E-45 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VS_2914 b309b9312a222169b8f4060f6b2643cb 312 SUPERFAMILY SSF160240 220 298 3.4E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VS_2914 b309b9312a222169b8f4060f6b2643cb 312 Pfam PF16916 Dimerisation domain of Zinc Transporter 220 297 1.6E-26 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VS_2914 b309b9312a222169b8f4060f6b2643cb 312 Gene3D G3DSA:3.30.70.1350 217 300 5.0E-31 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VS_2914 b309b9312a222169b8f4060f6b2643cb 312 SUPERFAMILY SSF161111 18 217 4.71E-51 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VS_2914 b309b9312a222169b8f4060f6b2643cb 312 Gene3D G3DSA:1.20.1510.10 18 216 6.4E-61 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VS_II0448 9234b28af3a7651ff63bb284500b9c04 310 SUPERFAMILY SSF103481 48 140 5.62E-7 T 14-10-2018 VS_II0448 9234b28af3a7651ff63bb284500b9c04 310 SUPERFAMILY SSF103481 208 290 1.7E-6 T 14-10-2018 VS_II0448 9234b28af3a7651ff63bb284500b9c04 310 Pfam PF00892 EamA-like transporter family 9 137 3.4E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0448 9234b28af3a7651ff63bb284500b9c04 310 Pfam PF00892 EamA-like transporter family 160 285 7.6E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_1343 b1be2a914021ff01c06baa68ed9bbd5f 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 4.5E-127 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VS_1343 b1be2a914021ff01c06baa68ed9bbd5f 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 259 1.8E-45 T 14-10-2018 VS_1343 b1be2a914021ff01c06baa68ed9bbd5f 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VS_1343 b1be2a914021ff01c06baa68ed9bbd5f 298 Gene3D G3DSA:3.20.20.60 1 298 6.6E-98 T 14-10-2018 VS_1343 b1be2a914021ff01c06baa68ed9bbd5f 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.974 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VS_1343 b1be2a914021ff01c06baa68ed9bbd5f 298 SUPERFAMILY SSF51621 6 294 2.15E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_2420 5d1cf5e4a7b0c1850a55ec7591bcdf77 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.13 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VS_2420 5d1cf5e4a7b0c1850a55ec7591bcdf77 154 SUPERFAMILY SSF53271 5 145 8.8E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_2420 5d1cf5e4a7b0c1850a55ec7591bcdf77 154 Pfam PF00156 Phosphoribosyl transferase domain 32 144 1.7E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VS_2420 5d1cf5e4a7b0c1850a55ec7591bcdf77 154 Gene3D G3DSA:3.40.50.2020 1 152 3.4E-40 T 14-10-2018 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 Gene3D G3DSA:3.40.50.2300 157 267 3.7E-35 T 14-10-2018 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 Gene3D G3DSA:3.40.930.10 1 156 3.6E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 170 261 4.8E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 SUPERFAMILY SSF55804 1 149 1.44E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 288 626 1.5E-81 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 169 253 1.5E-25 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 1.1E-38 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 SUPERFAMILY SSF52794 168 266 5.76E-31 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II0605 d603b2165a3b1c9a6799924d77843e86 644 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 134 9.3E-37 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VS_2361 914bbaaaab6483b6dbf5bf7c63f5eb76 172 SUPERFAMILY SSF55729 1 146 4.21E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2361 914bbaaaab6483b6dbf5bf7c63f5eb76 172 Gene3D G3DSA:3.40.630.30 1 158 6.0E-21 T 14-10-2018 VS_2361 914bbaaaab6483b6dbf5bf7c63f5eb76 172 Pfam PF13302 Acetyltransferase (GNAT) domain 7 139 2.4E-15 T 14-10-2018 IPR000182 GNAT domain VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 130 585 2.4E-126 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 Gene3D G3DSA:3.30.70.260 41 114 1.1E-6 T 14-10-2018 VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 13 599 44.421 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 SUPERFAMILY SSF82866 399 591 2.09E-37 T 14-10-2018 VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 Pfam PF13721 SecD export protein N-terminal TM region 12 110 1.6E-24 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 Pfam PF02355 Protein export membrane protein 417 586 9.7E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 335 578 9.4E-73 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 Gene3D G3DSA:3.30.70.3400 225 421 3.9E-46 T 14-10-2018 VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 Pfam PF07549 SecD/SecF GG Motif 124 145 1.3E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VS_II1482 1512bc4748e9308db6556eaf38e3e666 599 Gene3D G3DSA:3.30.1360.200 278 415 3.9E-46 T 14-10-2018 VS_0852 267a73a04fb36b94db20d184b4a76830 246 Pfam PF01578 Cytochrome C assembly protein 19 184 3.7E-32 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VS_0852 267a73a04fb36b94db20d184b4a76830 246 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.4E-84 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0852 267a73a04fb36b94db20d184b4a76830 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.8E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0852 267a73a04fb36b94db20d184b4a76830 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.8E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0852 267a73a04fb36b94db20d184b4a76830 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.8E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0852 267a73a04fb36b94db20d184b4a76830 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.8E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0852 267a73a04fb36b94db20d184b4a76830 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.8E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0852 267a73a04fb36b94db20d184b4a76830 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.8E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1091 66003e96804710eb628fb2fceacc818d 237 SMART SM00862 158 234 5.8E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_1091 66003e96804710eb628fb2fceacc818d 237 Pfam PF00072 Response regulator receiver domain 5 113 7.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1091 66003e96804710eb628fb2fceacc818d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 4.6E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_1091 66003e96804710eb628fb2fceacc818d 237 SUPERFAMILY SSF46894 134 235 1.87E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_1091 66003e96804710eb628fb2fceacc818d 237 Gene3D G3DSA:1.10.10.10 137 237 8.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1091 66003e96804710eb628fb2fceacc818d 237 SUPERFAMILY SSF52172 2 126 5.41E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_1091 66003e96804710eb628fb2fceacc818d 237 SMART SM00448 3 113 2.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1091 66003e96804710eb628fb2fceacc818d 237 Gene3D G3DSA:3.40.50.2300 1 136 7.4E-34 T 14-10-2018 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Gene3D G3DSA:3.40.630.30 729 892 1.5E-36 T 14-10-2018 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 SUPERFAMILY SSF55729 735 878 5.59E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Gene3D G3DSA:3.30.1490.20 511 588 8.1E-56 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 7.6E-50 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Gene3D G3DSA:3.40.50.261 295 465 2.3E-50 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Gene3D G3DSA:3.30.470.20 493 704 8.1E-56 T 14-10-2018 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Pfam PF13549 ATP-grasp domain 487 706 1.1E-68 T 14-10-2018 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Pfam PF13302 Acetyltransferase (GNAT) domain 738 876 9.5E-9 T 14-10-2018 IPR000182 GNAT domain VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Gene3D G3DSA:3.40.50.720 1 136 2.4E-32 T 14-10-2018 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 SUPERFAMILY SSF52210 133 291 6.02E-38 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 SUPERFAMILY SSF56059 493 704 1.32E-29 T 14-10-2018 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Pfam PF13380 CoA binding domain 11 136 3.1E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 Gene3D G3DSA:3.40.50.261 137 293 3.1E-51 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 SUPERFAMILY SSF51735 2 141 1.08E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 SMART SM00881 7 102 2.8E-25 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VS_II0748 c0d860fb20d123a6e7008f191c506ed9 893 SUPERFAMILY SSF52210 297 457 2.88E-41 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2836 30e2a48e87c18b6004c31da9bb294258 156 PIRSF PIRSF002122 3 156 3.5E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VS_2836 30e2a48e87c18b6004c31da9bb294258 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.617 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VS_2836 30e2a48e87c18b6004c31da9bb294258 156 SUPERFAMILY SSF47973 6 149 7.59E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VS_2836 30e2a48e87c18b6004c31da9bb294258 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2836 30e2a48e87c18b6004c31da9bb294258 156 Gene3D G3DSA:1.10.455.10 2 155 2.3E-63 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VS_2836 30e2a48e87c18b6004c31da9bb294258 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.2E-70 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VS_2836 30e2a48e87c18b6004c31da9bb294258 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.2E-65 T 14-10-2018 IPR023798 Ribosomal protein S7 domain VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 Gene3D G3DSA:1.20.272.10 213 337 1.8E-43 T 14-10-2018 VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 Gene3D G3DSA:3.40.50.300 1 139 5.5E-49 T 14-10-2018 VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 Gene3D G3DSA:1.10.8.60 143 212 6.2E-20 T 14-10-2018 VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 7.3E-48 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 331 1.7E-36 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 2.2E-105 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 SUPERFAMILY SSF52540 1 208 2.05E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0716 d9c8877dbcda8e902d603ecb2be47079 341 SUPERFAMILY SSF48019 211 333 4.68E-34 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 SUPERFAMILY SSF53067 6 209 2.4E-29 T 14-10-2018 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 Pfam PF00012 Hsp70 protein 90 318 7.2E-16 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 Pfam PF12531 DNA-K related protein 696 814 5.9E-49 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 SUPERFAMILY SSF53067 223 466 3.06E-21 T 14-10-2018 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 Gene3D G3DSA:3.30.420.40 6 226 1.0E-28 T 14-10-2018 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.2E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 PRINTS PR00301 70kDa heat shock protein signature 408 428 3.2E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.2E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1788 fd4712d178b2d7e349443951eb1645b6 824 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.2E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 SUPERFAMILY SSF82693 139 324 2.38E-18 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 SUPERFAMILY SSF82714 704 788 5.36E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 7.1E-72 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 SUPERFAMILY SSF82693 554 657 3.56E-17 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 SUPERFAMILY SSF82693 40 134 3.14E-25 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 3.7E-278 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 SUPERFAMILY SSF82866 792 1009 2.09E-48 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 SUPERFAMILY SSF82714 183 266 1.44E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 SUPERFAMILY SSF82866 291 489 4.84E-45 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 VS_2171 dc7f1baf7a1c218d22d9037df9da918f 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 14-10-2018 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.119 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Gene3D G3DSA:3.40.50.300 416 597 6.9E-51 T 14-10-2018 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.1E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Gene3D G3DSA:3.40.50.300 267 415 4.4E-50 T 14-10-2018 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Gene3D G3DSA:3.40.50.300 1 236 1.9E-72 T 14-10-2018 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Gene3D G3DSA:4.10.860.10 631 676 7.9E-21 T 14-10-2018 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 SUPERFAMILY SSF52540 37 578 3.04E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 129 3.6E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 SMART SM00490 461 547 1.3E-20 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Pfam PF00271 Helicase conserved C-terminal domain 439 545 6.9E-18 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 SUPERFAMILY SSF46600 624 673 2.22E-11 T 14-10-2018 IPR036876 UVR domain superfamily VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 SUPERFAMILY SSF52540 3 416 1.95E-135 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 SMART SM00487 9 426 6.7E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_0980 9f1b9f411dee7d0e5f1a3d7721a603ad 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 9.2E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VS_0168 52f35654c72f2ad02b83b7e45634422d 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_0168 52f35654c72f2ad02b83b7e45634422d 664 Gene3D G3DSA:3.40.50.920 539 664 1.8E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_0168 52f35654c72f2ad02b83b7e45634422d 664 Pfam PF02780 Transketolase, C-terminal domain 542 654 1.1E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VS_0168 52f35654c72f2ad02b83b7e45634422d 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 660 3.9E-303 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VS_0168 52f35654c72f2ad02b83b7e45634422d 664 SUPERFAMILY SSF52518 346 527 5.35E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_0168 52f35654c72f2ad02b83b7e45634422d 664 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_0168 52f35654c72f2ad02b83b7e45634422d 664 SMART SM00861 355 527 9.4E-68 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_0168 52f35654c72f2ad02b83b7e45634422d 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.4E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_0168 52f35654c72f2ad02b83b7e45634422d 664 Gene3D G3DSA:3.40.50.970 327 538 1.3E-81 T 14-10-2018 VS_0168 52f35654c72f2ad02b83b7e45634422d 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 8.7E-166 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_0168 52f35654c72f2ad02b83b7e45634422d 664 SUPERFAMILY SSF52518 5 328 8.84E-119 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_0168 52f35654c72f2ad02b83b7e45634422d 664 Gene3D G3DSA:3.40.50.970 2 326 1.1E-131 T 14-10-2018 VS_0168 52f35654c72f2ad02b83b7e45634422d 664 SUPERFAMILY SSF52922 534 663 9.42E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 SUPERFAMILY SSF55785 14 90 2.09E-8 T 14-10-2018 IPR035965 PAS domain superfamily VS_0820 fcd3bad8178c829b43848d6b56719a28 346 Pfam PF13188 PAS domain 21 69 5.3E-8 T 14-10-2018 IPR000014 PAS domain VS_0820 fcd3bad8178c829b43848d6b56719a28 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 339 1.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0820 fcd3bad8178c829b43848d6b56719a28 346 SMART SM00387 234 340 2.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0820 fcd3bad8178c829b43848d6b56719a28 346 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 86 1.7E-5 T 14-10-2018 IPR000014 PAS domain VS_0820 fcd3bad8178c829b43848d6b56719a28 346 SMART SM00091 21 84 3.1E-6 T 14-10-2018 IPR000014 PAS domain VS_0820 fcd3bad8178c829b43848d6b56719a28 346 SUPERFAMILY SSF47384 120 191 4.32E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 5.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 5.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 5.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 299 5.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 Gene3D G3DSA:3.30.565.10 193 345 1.5E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0820 fcd3bad8178c829b43848d6b56719a28 346 SUPERFAMILY SSF55874 180 339 6.42E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0820 fcd3bad8178c829b43848d6b56719a28 346 Gene3D G3DSA:3.30.450.20 11 111 8.7E-8 T 14-10-2018 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 SMART SM00388 125 191 6.2E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 189 3.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0820 fcd3bad8178c829b43848d6b56719a28 346 Gene3D G3DSA:1.10.287.130 112 188 4.1E-9 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 3.4E-12 T 14-10-2018 IPR001357 BRCT domain VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Gene3D G3DSA:3.40.50.10190 586 670 3.4E-25 T 14-10-2018 IPR036420 BRCT domain superfamily VS_2286 89ae7e723b20e79d003fa2e39439c540 670 SUPERFAMILY SSF56091 4 317 2.3E-121 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Gene3D G3DSA:1.10.150.20 507 585 1.3E-27 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 SMART SM00292 595 669 1.2E-9 T 14-10-2018 IPR001357 BRCT domain VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 2.6E-34 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 SUPERFAMILY SSF47781 404 584 1.07E-57 T 14-10-2018 IPR010994 RuvA domain 2-like VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Pfam PF14520 Helix-hairpin-helix domain 447 502 5.7E-5 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 SUPERFAMILY SSF52113 594 669 3.4E-17 T 14-10-2018 IPR036420 BRCT domain superfamily VS_2286 89ae7e723b20e79d003fa2e39439c540 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 3.9E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 SUPERFAMILY SSF50249 319 399 1.61E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2286 89ae7e723b20e79d003fa2e39439c540 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Gene3D G3DSA:2.20.70.80 392 432 1.5E-19 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 SMART SM00532 4 449 7.5E-269 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 319 1.2E-131 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 1.4E-21 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Gene3D G3DSA:2.40.50.140 319 391 3.6E-33 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Gene3D G3DSA:1.10.287.610 2 69 2.3E-25 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Gene3D G3DSA:1.10.150.20 433 506 1.5E-27 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 52.338 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 PIRSF PIRSF001604 1 670 4.5E-250 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 Gene3D G3DSA:3.30.470.90 70 318 1.9E-100 T 14-10-2018 VS_2286 89ae7e723b20e79d003fa2e39439c540 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 1.6E-260 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 SMART SM00316 37 119 4.0E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 5.6E-170 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 Hamap MF_00970 Ribonuclease E [rne]. 1 1029 35.966 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 SUPERFAMILY SSF50249 40 124 2.52E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 Gene3D G3DSA:3.40.1260.20 400 508 6.7E-39 T 14-10-2018 VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 Pfam PF10150 Ribonuclease E/G family 121 390 8.7E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 Gene3D G3DSA:2.40.50.140 32 125 2.3E-32 T 14-10-2018 VS_1016 5325147805294cf539c5dbbf68dce1c3 1041 Pfam PF00575 S1 RNA binding domain 37 118 3.1E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2632 2135246d4a87d4070d7f6ba1e9e17273 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-27 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VS_2632 2135246d4a87d4070d7f6ba1e9e17273 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.9E-29 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VS_2632 2135246d4a87d4070d7f6ba1e9e17273 68 Gene3D G3DSA:3.30.1910.10 1 63 1.2E-29 T 14-10-2018 VS_0132 901284c9891b0cfafefcbf41fbf51294 297 Gene3D G3DSA:3.55.30.10 4 180 1.4E-64 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VS_0132 901284c9891b0cfafefcbf41fbf51294 297 SUPERFAMILY SSF118352 228 287 2.22E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VS_0132 901284c9891b0cfafefcbf41fbf51294 297 Gene3D G3DSA:3.90.1280.10 230 289 3.2E-18 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VS_0132 901284c9891b0cfafefcbf41fbf51294 297 Gene3D G3DSA:1.10.287.480 183 229 3.1E-22 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VS_0132 901284c9891b0cfafefcbf41fbf51294 297 Pfam PF01430 Hsp33 protein 11 277 1.7E-79 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VS_0132 901284c9891b0cfafefcbf41fbf51294 297 SUPERFAMILY SSF64397 9 236 2.22E-76 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VS_0132 901284c9891b0cfafefcbf41fbf51294 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 8 288 32.066 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VS_0132 901284c9891b0cfafefcbf41fbf51294 297 PIRSF PIRSF005261 1 289 1.9E-71 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VS_1374 7bd54df4d25b5d801bf125a74c9bb833 625 SUPERFAMILY SSF81901 457 554 1.44E-5 T 14-10-2018 VS_1374 7bd54df4d25b5d801bf125a74c9bb833 625 Pfam PF15611 EH_Signature domain 256 378 7.9E-13 T 14-10-2018 IPR028943 EH signature domain VS_1374 7bd54df4d25b5d801bf125a74c9bb833 625 Gene3D G3DSA:1.25.40.10 426 606 8.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 Pfam PF04545 Sigma-70, region 4 236 290 1.2E-8 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 Pfam PF00140 Sigma-70 factor, region 1.2 30 59 1.1E-6 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 PRINTS PR00046 Major sigma-70 factor signature 116 124 7.5E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 PRINTS PR00046 Major sigma-70 factor signature 277 288 7.5E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 PRINTS PR00046 Major sigma-70 factor signature 92 105 7.5E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 PRINTS PR00046 Major sigma-70 factor signature 239 251 7.5E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 SUPERFAMILY SSF88659 199 293 4.45E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 Gene3D G3DSA:1.10.10.10 217 294 8.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 61 292 2.6E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 PIRSF PIRSF000770 13 295 5.5E-33 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 SUPERFAMILY SSF88946 27 138 2.98E-38 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 92 105 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 Gene3D G3DSA:1.10.601.10 53 140 7.5E-38 T 14-10-2018 VS_II0853 f3e49b041fb7d85ee37563ba166757dd 298 Pfam PF04542 Sigma-70 region 2 65 130 7.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 SUPERFAMILY SSF46785 4 85 3.65E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 Gene3D G3DSA:3.40.190.290 91 293 7.5E-65 T 14-10-2018 VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 Pfam PF03466 LysR substrate binding domain 89 292 1.8E-44 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 SUPERFAMILY SSF53850 87 294 1.06E-47 T 14-10-2018 VS_II0552 afd4cfbe552e7e69d2ca965914c4da35 298 Gene3D G3DSA:1.10.10.10 2 86 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1564 397c14d3935f585939fe4845cfcbcd5b 247 SMART SM00382 32 231 4.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1564 397c14d3935f585939fe4845cfcbcd5b 247 Gene3D G3DSA:3.40.50.300 4 247 3.3E-71 T 14-10-2018 VS_1564 397c14d3935f585939fe4845cfcbcd5b 247 PIRSF PIRSF039085 5 247 2.3E-90 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VS_1564 397c14d3935f585939fe4845cfcbcd5b 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1564 397c14d3935f585939fe4845cfcbcd5b 247 SUPERFAMILY SSF52540 8 241 2.47E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1564 397c14d3935f585939fe4845cfcbcd5b 247 Pfam PF00005 ABC transporter 23 175 1.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1234 764341cb5860e6122058e8fb727a182b 412 Gene3D G3DSA:3.80.10.10 3 100 7.8E-17 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily VS_1234 764341cb5860e6122058e8fb727a182b 412 Gene3D G3DSA:3.80.10.10 101 191 8.9E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily VS_1234 764341cb5860e6122058e8fb727a182b 412 SUPERFAMILY SSF56112 201 371 4.92E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_1234 764341cb5860e6122058e8fb727a182b 412 SUPERFAMILY SSF52075 37 198 2.88E-35 T 14-10-2018 VS_1234 764341cb5860e6122058e8fb727a182b 412 Gene3D G3DSA:3.30.200.20 192 284 1.4E-8 T 14-10-2018 VS_1234 764341cb5860e6122058e8fb727a182b 412 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 209 236 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00369 37 57 21.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00369 104 126 95.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00369 58 81 5.9 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00369 149 172 7.6 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00369 127 148 170.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype VS_1234 764341cb5860e6122058e8fb727a182b 412 Pfam PF00069 Protein kinase domain 203 366 3.3E-16 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00364 35 54 18.0 T 14-10-2018 VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00364 126 145 94.0 T 14-10-2018 VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00364 58 77 41.0 T 14-10-2018 VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00364 103 122 40.0 T 14-10-2018 VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00364 149 168 35.0 T 14-10-2018 VS_1234 764341cb5860e6122058e8fb727a182b 412 Pfam PF13855 Leucine rich repeat 105 162 2.6E-8 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 VS_1234 764341cb5860e6122058e8fb727a182b 412 SMART SM00220 203 404 7.4E-6 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_1234 764341cb5860e6122058e8fb727a182b 412 Gene3D G3DSA:1.10.510.10 296 398 2.9E-10 T 14-10-2018 VS_2313 cff682fcd64af5a71e47b29ddfe88927 197 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VS_2313 cff682fcd64af5a71e47b29ddfe88927 197 SUPERFAMILY SSF52218 4 190 3.67E-57 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2313 cff682fcd64af5a71e47b29ddfe88927 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 190 4.4E-42 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VS_2313 cff682fcd64af5a71e47b29ddfe88927 197 Gene3D G3DSA:3.40.50.360 1 194 5.0E-63 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2313 cff682fcd64af5a71e47b29ddfe88927 197 Pfam PF03358 NADPH-dependent FMN reductase 6 141 5.9E-13 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VS_1247 d11a59644ab7fecec654a78d5b6180a6 722 Gene3D G3DSA:1.50.10.100 5 346 8.4E-92 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VS_1247 d11a59644ab7fecec654a78d5b6180a6 722 SUPERFAMILY SSF48230 31 327 4.03E-47 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VS_1247 d11a59644ab7fecec654a78d5b6180a6 722 Gene3D G3DSA:2.70.98.70 350 721 2.2E-98 T 14-10-2018 VS_1247 d11a59644ab7fecec654a78d5b6180a6 722 Pfam PF05426 Alginate lyase 52 264 2.1E-13 T 14-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 VS_1247 d11a59644ab7fecec654a78d5b6180a6 722 Pfam PF07940 Heparinase II/III-like protein 356 634 2.0E-20 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 VS_1246 13f6305ff6e3a938efe79acc5c0a10a9 736 Gene3D G3DSA:2.70.98.70 359 724 8.8E-96 T 14-10-2018 VS_1246 13f6305ff6e3a938efe79acc5c0a10a9 736 Pfam PF05426 Alginate lyase 49 276 1.5E-15 T 14-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 VS_1246 13f6305ff6e3a938efe79acc5c0a10a9 736 Gene3D G3DSA:1.50.10.100 9 351 1.9E-88 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VS_1246 13f6305ff6e3a938efe79acc5c0a10a9 736 SUPERFAMILY SSF48230 48 293 4.58E-45 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VS_1246 13f6305ff6e3a938efe79acc5c0a10a9 736 Pfam PF07940 Heparinase II/III-like protein 375 636 6.7E-23 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 SMART SM00448 736 848 3.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Gene3D G3DSA:3.30.565.10 548 714 5.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 SMART SM00387 594 711 5.3E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 SUPERFAMILY SSF55874 536 709 2.88E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 547 1.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Gene3D G3DSA:3.30.450.20 346 472 1.3E-10 T 14-10-2018 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Gene3D G3DSA:3.30.450.220 50 210 1.5E-60 T 14-10-2018 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 664 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 650 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 689 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 708 4.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Pfam PF09308 LuxQ, periplasmic 40 280 2.3E-103 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 SMART SM00388 482 547 4.8E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 SUPERFAMILY SSF103190 51 272 4.55E-64 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 SUPERFAMILY SSF47384 470 548 6.47E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 710 1.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Gene3D G3DSA:3.40.50.2300 717 853 3.1E-30 T 14-10-2018 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Gene3D G3DSA:1.10.287.130 473 547 9.1E-21 T 14-10-2018 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 12 363 6.0E-78 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Pfam PF00072 Response regulator receiver domain 738 847 1.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 Gene3D G3DSA:2.20.20.100 211 273 2.2E-5 T 14-10-2018 VS_II0356 1d6802a9f01dddabb54dce046f672f84 861 SUPERFAMILY SSF52172 735 853 1.99E-29 T 14-10-2018 IPR011006 CheY-like superfamily VS_0379 691acc8336c14e8622ebe10c2c14f893 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 1.7E-136 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VS_0379 691acc8336c14e8622ebe10c2c14f893 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 2.1E-163 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VS_0379 691acc8336c14e8622ebe10c2c14f893 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 50.72 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VS_0379 691acc8336c14e8622ebe10c2c14f893 363 Gene3D G3DSA:3.40.718.10 1 363 1.3E-155 T 14-10-2018 VS_0379 691acc8336c14e8622ebe10c2c14f893 363 SUPERFAMILY SSF53659 4 360 3.42E-122 T 14-10-2018 VS_0379 691acc8336c14e8622ebe10c2c14f893 363 SMART SM01329 7 356 1.9E-199 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VS_0379 691acc8336c14e8622ebe10c2c14f893 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 SUPERFAMILY SSF52540 8 271 4.19E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 8 328 4.5E-169 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 PRINTS PR00142 RecA protein signature 169 198 7.5E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 PRINTS PR00142 RecA protein signature 131 160 7.5E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 PRINTS PR00142 RecA protein signature 97 126 7.5E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 PRINTS PR00142 RecA protein signature 301 318 7.5E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 PRINTS PR00142 RecA protein signature 214 242 7.5E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 PRINTS PR00142 RecA protein signature 247 276 7.5E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 SUPERFAMILY SSF54752 273 328 2.35E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 Gene3D G3DSA:3.40.50.300 30 271 2.2E-81 T 14-10-2018 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 Hamap MF_00268 Protein RecA [recA]. 9 333 50.543 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 SMART SM00382 61 232 5.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 ProSitePatterns PS00321 recA signature. 217 225 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 Pfam PF00154 recA bacterial DNA recombination protein 11 271 6.3E-142 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_2596 bb099c23e7972c43656dc3e6da24e69a 350 Gene3D G3DSA:3.30.250.10 272 348 6.1E-25 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 SMART SM00862 215 291 2.4E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 Pfam PF00486 Transcriptional regulatory protein, C terminal 216 291 4.4E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 SUPERFAMILY SSF46894 196 292 5.95E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 SUPERFAMILY SSF52172 57 190 8.11E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 Gene3D G3DSA:1.10.10.10 183 295 4.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 Gene3D G3DSA:3.40.50.2300 55 182 2.9E-33 T 14-10-2018 VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 Pfam PF00072 Response regulator receiver domain 65 172 2.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0479 a90aac78abb276b8152b7e8888d07e0a 297 SMART SM00448 63 173 1.5E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 9 139 2.0E-62 T 14-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 SUPERFAMILY SSF46955 10 129 4.76E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 Pfam PF09278 MerR, DNA binding 55 117 1.5E-15 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 Gene3D G3DSA:1.10.1660.10 4 137 2.0E-34 T 14-10-2018 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 3.3E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 3.3E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 3.3E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 Pfam PF00376 MerR family regulatory protein 12 48 3.6E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2950 33687fdcfc87a260330b9fe87df9abd2 154 SMART SM00422 10 79 5.3E-27 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 6.2E-4 T 14-10-2018 VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 SUPERFAMILY SSF51735 2 242 1.09E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 242 4.4E-57 T 14-10-2018 VS_1577 5a9d09dbd2ce6881757a850ed78f8af0 243 Gene3D G3DSA:3.40.50.720 1 243 1.8E-77 T 14-10-2018 VS_1622 83714609eeb9657f865c0f416c3cbe63 299 Gene3D G3DSA:1.10.510.10 145 234 5.3E-19 T 14-10-2018 VS_1622 83714609eeb9657f865c0f416c3cbe63 299 Gene3D G3DSA:3.30.200.20 21 131 2.8E-5 T 14-10-2018 VS_1622 83714609eeb9657f865c0f416c3cbe63 299 SMART SM00090 1 239 1.7E-15 T 14-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 VS_1622 83714609eeb9657f865c0f416c3cbe63 299 SUPERFAMILY SSF56112 23 227 3.57E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_1622 83714609eeb9657f865c0f416c3cbe63 299 Pfam PF01163 RIO1 family 36 227 1.5E-40 T 14-10-2018 VS_1622 83714609eeb9657f865c0f416c3cbe63 299 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 169 180 - T 14-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 SUPERFAMILY SSF46894 120 212 3.06E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 Pfam PF00072 Response regulator receiver domain 5 110 1.0E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 Gene3D G3DSA:3.40.50.2300 1 119 7.8E-24 T 14-10-2018 VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 7.5E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 SMART SM00448 2 110 2.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 SUPERFAMILY SSF52172 2 169 1.11E-23 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 SMART SM00862 140 211 5.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0845 fdb6eefb597bcadfef9114c5fcc30c75 216 Gene3D G3DSA:1.10.10.10 120 216 1.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2018 13bf49ad9c5e4e880d9c0c132ea42491 171 Pfam PF02810 SEC-C motif 154 171 4.3E-10 T 14-10-2018 IPR004027 SEC-C motif VS_2018 13bf49ad9c5e4e880d9c0c132ea42491 171 SUPERFAMILY SSF54427 26 127 9.64E-34 T 14-10-2018 IPR032710 NTF2-like domain superfamily VS_2018 13bf49ad9c5e4e880d9c0c132ea42491 171 Gene3D G3DSA:3.10.450.50 1 171 5.7E-51 T 14-10-2018 VS_2018 13bf49ad9c5e4e880d9c0c132ea42491 171 SUPERFAMILY SSF103642 151 171 4.41E-8 T 14-10-2018 VS_II0639 c2355be2f50dd2608802e3f6487d48a7 190 Pfam PF00293 NUDIX domain 52 168 2.1E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_II0639 c2355be2f50dd2608802e3f6487d48a7 190 ProSitePatterns PS00893 Nudix box signature. 87 108 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_II0639 c2355be2f50dd2608802e3f6487d48a7 190 Gene3D G3DSA:3.90.79.10 13 187 1.9E-46 T 14-10-2018 VS_II0639 c2355be2f50dd2608802e3f6487d48a7 190 SUPERFAMILY SSF55811 16 187 5.82E-43 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 Pfam PF07196 Flagellin hook IN motif 197 246 3.6E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 SUPERFAMILY SSF64518 1 399 4.58E-98 T 14-10-2018 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 Pfam PF00700 Bacterial flagellin C-terminal helical region 313 398 2.2E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 Gene3D G3DSA:1.10.8.410 349 399 1.6E-21 T 14-10-2018 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 PRINTS PR00207 Flagellin signature 76 95 9.8E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 PRINTS PR00207 Flagellin signature 111 134 9.8E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 PRINTS PR00207 Flagellin signature 37 54 9.8E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 Gene3D G3DSA:3.30.70.2120 174 297 8.3E-81 T 14-10-2018 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 Gene3D G3DSA:1.20.1330.10 44 348 8.3E-81 T 14-10-2018 VS_0812 7514f12f712f7fdeee0754c0b377c6f3 399 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.5E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_II0250 fc546c5d8ec20bfbddc5149f42b95e6e 328 Pfam PF13602 Zinc-binding dehydrogenase 211 326 2.1E-8 T 14-10-2018 VS_II0250 fc546c5d8ec20bfbddc5149f42b95e6e 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 96 5.1E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VS_II0250 fc546c5d8ec20bfbddc5149f42b95e6e 328 Gene3D G3DSA:3.90.180.10 15 313 2.6E-61 T 14-10-2018 VS_II0250 fc546c5d8ec20bfbddc5149f42b95e6e 328 SMART SM00829 16 326 7.6E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VS_II0250 fc546c5d8ec20bfbddc5149f42b95e6e 328 SUPERFAMILY SSF51735 122 286 2.05E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0250 fc546c5d8ec20bfbddc5149f42b95e6e 328 Gene3D G3DSA:3.40.50.720 141 262 2.6E-61 T 14-10-2018 VS_II0250 fc546c5d8ec20bfbddc5149f42b95e6e 328 SUPERFAMILY SSF50129 16 151 2.43E-22 T 14-10-2018 IPR011032 GroES-like superfamily VS_1006 b86da4784788e2881fd0c9b64125de0d 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 515 8.6E-297 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VS_1006 b86da4784788e2881fd0c9b64125de0d 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 516 2.2E-290 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VS_1006 b86da4784788e2881fd0c9b64125de0d 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 375.386 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VS_2090 e671a6664b213071b1fb612affca5607 199 SUPERFAMILY SSF52833 20 197 1.37E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2090 e671a6664b213071b1fb612affca5607 199 Pfam PF01323 DSBA-like thioredoxin domain 40 178 2.3E-20 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VS_2090 e671a6664b213071b1fb612affca5607 199 Gene3D G3DSA:3.40.30.10 17 199 9.7E-52 T 14-10-2018 VS_2090 e671a6664b213071b1fb612affca5607 199 PIRSF PIRSF001488 1 199 2.7E-62 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VS_2090 e671a6664b213071b1fb612affca5607 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VS_0678 3de586aa896c56cb9572ef7dda246047 445 SUPERFAMILY SSF55729 300 426 5.75E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_0678 3de586aa896c56cb9572ef7dda246047 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.972 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VS_0678 3de586aa896c56cb9572ef7dda246047 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 443 3.1E-203 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VS_0678 3de586aa896c56cb9572ef7dda246047 445 PIRSF PIRSF000423 1 445 5.1E-204 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VS_0678 3de586aa896c56cb9572ef7dda246047 445 Gene3D G3DSA:3.40.630.30 297 445 2.7E-37 T 14-10-2018 VS_0678 3de586aa896c56cb9572ef7dda246047 445 Gene3D G3DSA:3.40.1160.10 7 296 5.8E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_0678 3de586aa896c56cb9572ef7dda246047 445 Pfam PF00583 Acetyltransferase (GNAT) family 334 416 6.0E-7 T 14-10-2018 IPR000182 GNAT domain VS_0678 3de586aa896c56cb9572ef7dda246047 445 Pfam PF00696 Amino acid kinase family 25 271 1.5E-26 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_0678 3de586aa896c56cb9572ef7dda246047 445 SUPERFAMILY SSF53633 5 294 1.06E-69 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF51735 1772 1966 8.28E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF08659 KR domain 2013 2233 6.8E-30 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF47336 1442 1533 2.75E-16 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF53901 271 479 1.34E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 TIGRFAM TIGR02813 omega_3_PfaA: polyketide-type polyunsaturated fatty acid synthase PfaA 18 2582 0.0 T 14-10-2018 IPR004432 Polyketide-type polyunsaturated fatty acid synthase, PfaA VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF47336 1646 1739 3.01E-16 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:3.40.366.10 599 890 9.6E-80 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF53901 25 308 5.15E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 599 910 2.2E-42 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 429 533 4.5E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF14765 Polyketide synthase dehydratase 2302 2573 9.6E-32 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:1.10.1200.10 1533 1627 5.5E-29 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:1.10.1200.10 1431 1524 8.2E-29 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:1.10.1200.10 1333 1426 1.5E-29 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:1.10.1200.10 1637 1730 2.5E-28 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:1.10.1200.10 1233 1325 6.9E-29 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SMART SM00825 Beta-ketoacyl synthase 26 481 2.8E-87 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF51735 2009 2269 3.12E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:3.40.47.10 22 548 1.5E-156 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF47336 1541 1633 8.51E-17 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF47336 1343 1432 3.01E-17 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 309 426 7.4E-37 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF00550 Phosphopantetheine attachment site 1249 1315 5.3E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF00550 Phosphopantetheine attachment site 1448 1514 2.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF00550 Phosphopantetheine attachment site 1349 1416 6.5E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF00550 Phosphopantetheine attachment site 1653 1718 1.3E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF00550 Phosphopantetheine attachment site 1549 1615 4.6E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF00698 Acyl transferase domain 599 899 1.9E-34 T 14-10-2018 IPR014043 Acyl transferase VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:3.10.129.110 2317 2573 2.0E-26 T 14-10-2018 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF47336 1244 1327 1.31E-15 T 14-10-2018 IPR036736 ACP-like superfamily VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 25 301 4.1E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 Gene3D G3DSA:3.30.70.250 730 801 9.6E-80 T 14-10-2018 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2011 2235 4.6E-39 T 14-10-2018 VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF52151 595 898 2.88E-58 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_2215 b27476271f7d2334fa76d5a6f35c791d 2604 SUPERFAMILY SSF55048 735 801 6.54E-13 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VS_0375 02294dff4339c1b5c9896806dbf7070d 181 SUPERFAMILY SSF48452 2 177 2.84E-67 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0375 02294dff4339c1b5c9896806dbf7070d 181 Gene3D G3DSA:1.20.58.320 1 80 1.3E-24 T 14-10-2018 VS_0375 02294dff4339c1b5c9896806dbf7070d 181 Gene3D G3DSA:1.25.40.10 81 181 9.8E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0375 02294dff4339c1b5c9896806dbf7070d 181 Pfam PF06041 Bacterial protein of unknown function (DUF924) 8 178 6.4E-62 T 14-10-2018 IPR010323 Protein of unknown function DUF924 VS_II0756 d85c1a03baf8e08f61fa1b5dbb299ed6 484 SUPERFAMILY SSF51905 10 269 1.46E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0756 d85c1a03baf8e08f61fa1b5dbb299ed6 484 Pfam PF01266 FAD dependent oxidoreductase 13 331 2.1E-11 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VS_II0756 d85c1a03baf8e08f61fa1b5dbb299ed6 484 Gene3D G3DSA:3.30.9.10 124 313 1.9E-8 T 14-10-2018 VS_II0756 d85c1a03baf8e08f61fa1b5dbb299ed6 484 SUPERFAMILY SSF51735 13 130 7.22E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0756 d85c1a03baf8e08f61fa1b5dbb299ed6 484 Gene3D G3DSA:3.50.50.60 13 266 1.9E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2220 f62aeb1b0f37cc338e385ede4c6754e1 564 Gene3D G3DSA:3.40.50.12780 9 457 6.0E-117 T 14-10-2018 VS_2220 f62aeb1b0f37cc338e385ede4c6754e1 564 Pfam PF00501 AMP-binding enzyme 29 461 1.3E-106 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_2220 f62aeb1b0f37cc338e385ede4c6754e1 564 SUPERFAMILY SSF56801 13 553 6.67E-149 T 14-10-2018 VS_2220 f62aeb1b0f37cc338e385ede4c6754e1 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 4.2E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VS_2220 f62aeb1b0f37cc338e385ede4c6754e1 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site VS_2220 f62aeb1b0f37cc338e385ede4c6754e1 564 Gene3D G3DSA:3.30.300.310 458 559 7.3E-30 T 14-10-2018 VS_1453 403ffc1e2f459910f0f8431b33174fd7 91 SUPERFAMILY SSF50249 1 84 9.42E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1453 403ffc1e2f459910f0f8431b33174fd7 91 Gene3D G3DSA:2.40.50.140 1 87 1.0E-26 T 14-10-2018 VS_1453 403ffc1e2f459910f0f8431b33174fd7 91 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 84 5.0E-22 T 14-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VS_1453 403ffc1e2f459910f0f8431b33174fd7 91 Pfam PF02303 Helix-destabilising protein 2 84 9.0E-34 T 14-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VS_2060 90b297645ef913d07491bdfaf8b1b9ad 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 VS_2060 90b297645ef913d07491bdfaf8b1b9ad 59 Pfam PF03966 Trm112p-like protein 2 41 2.2E-11 T 14-10-2018 IPR005651 Trm112-like VS_2060 90b297645ef913d07491bdfaf8b1b9ad 59 Gene3D G3DSA:2.20.25.10 8 59 2.1E-23 T 14-10-2018 VS_2060 90b297645ef913d07491bdfaf8b1b9ad 59 SUPERFAMILY SSF158997 1 54 2.88E-20 T 14-10-2018 VS_2248 34276452f1a6472f0ee213565daac3d0 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2248 34276452f1a6472f0ee213565daac3d0 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 2.3E-39 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2248 34276452f1a6472f0ee213565daac3d0 130 Gene3D G3DSA:1.20.1300.10 5 130 1.2E-43 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2248 34276452f1a6472f0ee213565daac3d0 130 SUPERFAMILY SSF81343 8 130 2.78E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2248 34276452f1a6472f0ee213565daac3d0 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2248 34276452f1a6472f0ee213565daac3d0 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 2.9E-29 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2248 34276452f1a6472f0ee213565daac3d0 130 PIRSF PIRSF000178 3 130 4.7E-32 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2906 0feb704113057c531e1f599365074f00 335 SUPERFAMILY SSF56655 1 324 7.32E-104 T 14-10-2018 VS_2906 0feb704113057c531e1f599365074f00 335 Gene3D G3DSA:3.30.540.10 7 319 1.2E-122 T 14-10-2018 VS_2906 0feb704113057c531e1f599365074f00 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 331 3.9E-167 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VS_2906 0feb704113057c531e1f599365074f00 335 Gene3D G3DSA:3.40.190.90 109 276 1.2E-122 T 14-10-2018 VS_2906 0feb704113057c531e1f599365074f00 335 PIRSF PIRSF004532 1 331 3.1E-132 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VS_2906 0feb704113057c531e1f599365074f00 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.6E-125 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 Gene3D G3DSA:3.10.50.30 77 159 2.0E-32 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 8.6E-24 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 Gene3D G3DSA:1.10.287.180 1 76 6.2E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.806 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 PIRSF PIRSF006092 1 158 4.5E-43 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 50.924 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.3E-22 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 1.3E-71 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 SUPERFAMILY SSF46557 3 78 1.57E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VS_0155 c811671c9d0557d544445fb022eeb2e2 160 SUPERFAMILY SSF54534 80 156 2.75E-20 T 14-10-2018 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 Gene3D G3DSA:3.30.1130.10 85 217 9.2E-51 T 14-10-2018 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 SUPERFAMILY SSF55620 8 216 7.41E-74 T 14-10-2018 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.543 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 Gene3D G3DSA:1.10.286.10 1 84 5.0E-37 T 14-10-2018 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 5.3E-79 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_II0491 82a25f8dc6fc185a9752b0de1ef592e4 217 Pfam PF01227 GTP cyclohydrolase I 38 215 1.8E-62 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_1133 e0a418b245411565ef2203771fe5b1eb 417 Gene3D G3DSA:3.30.9.10 134 359 4.0E-52 T 14-10-2018 VS_1133 e0a418b245411565ef2203771fe5b1eb 417 Gene3D G3DSA:3.50.50.60 1 89 2.0E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_1133 e0a418b245411565ef2203771fe5b1eb 417 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.597 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 VS_1133 e0a418b245411565ef2203771fe5b1eb 417 Pfam PF01266 FAD dependent oxidoreductase 3 397 1.6E-73 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VS_1133 e0a418b245411565ef2203771fe5b1eb 417 Gene3D G3DSA:3.50.50.60 108 399 4.0E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_1133 e0a418b245411565ef2203771fe5b1eb 417 SUPERFAMILY SSF54373 270 360 2.22E-17 T 14-10-2018 VS_1133 e0a418b245411565ef2203771fe5b1eb 417 SUPERFAMILY SSF51905 1 416 9.32E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 SUPERFAMILY SSF46689 5 77 1.9E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 Gene3D G3DSA:1.10.357.10 5 196 1.6E-43 T 14-10-2018 VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 95.292 T 14-10-2018 IPR017757 Transcriptional repressor BetI VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 3.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 2.7E-74 T 14-10-2018 IPR017757 Transcriptional repressor BetI VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 SUPERFAMILY SSF48498 86 192 3.65E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_II0056 d148407017c1532cd5e3b4381bd6cd5a 200 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 9.5E-30 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.3E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 14-10-2018 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 SMART SM00662 23 235 1.0E-103 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.691 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 SUPERFAMILY SSF56553 53 179 1.73E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.2E-111 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 Gene3D G3DSA:2.170.120.12 53 178 1.7E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 SUPERFAMILY SSF55257 7 234 5.69E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 14-10-2018 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2807 6e24cbce3ab074aae0b3f34e110bf8c3 330 Gene3D G3DSA:3.30.1360.10 17 229 1.7E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 42.971 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 Gene3D G3DSA:1.10.10.10 75 160 2.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 5.2E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 71 7.8E-6 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 2.5E-38 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 SUPERFAMILY SSF46767 75 156 1.22E-33 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 Gene3D G3DSA:3.30.160.70 3 71 2.3E-15 T 14-10-2018 VS_II1430 0296a81d924a0cd5ce511b14b7c3abd8 160 SUPERFAMILY SSF53155 5 80 6.67E-19 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VS_II0363 693323f7974ef3e2bf334ba28a15cffd 210 PIRSF PIRSF006324 1 208 1.0E-55 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_II0363 693323f7974ef3e2bf334ba28a15cffd 210 Pfam PF01810 LysE type translocator 16 204 1.3E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_0354 e8a177869079395545c993ec72597e3b 874 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 47 740 1.6E-212 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VS_0354 e8a177869079395545c993ec72597e3b 874 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 149 682 4.2E-76 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VS_0354 e8a177869079395545c993ec72597e3b 874 Pfam PF11874 Domain of unknown function (DUF3394) 689 868 6.8E-70 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 Pfam PF01782 RimM N-terminal domain 18 97 7.6E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 Pfam PF05239 PRC-barrel domain 105 179 4.1E-13 T 14-10-2018 IPR027275 PRC-barrel domain VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 184 3.5E-56 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.822 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 SUPERFAMILY SSF50447 15 102 4.24E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 SUPERFAMILY SSF50346 108 184 3.34E-20 T 14-10-2018 IPR011033 PRC-barrel-like superfamily VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 Gene3D G3DSA:2.30.30.240 103 184 2.8E-31 T 14-10-2018 VS_2557 ae74e32adf7ca932bf698491704bfb4c 184 Gene3D G3DSA:2.40.30.60 6 102 7.5E-32 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VS_II0947 8ffc101aee97984b7642204250ecfbaa 532 Gene3D G3DSA:3.20.20.450 259 521 2.2E-76 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0947 8ffc101aee97984b7642204250ecfbaa 532 Pfam PF00563 EAL domain 268 503 3.1E-62 T 14-10-2018 IPR001633 EAL domain VS_II0947 8ffc101aee97984b7642204250ecfbaa 532 Pfam PF12792 CSS motif domain associated with EAL 45 237 1.3E-32 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VS_II0947 8ffc101aee97984b7642204250ecfbaa 532 SUPERFAMILY SSF141868 267 515 2.48E-71 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0947 8ffc101aee97984b7642204250ecfbaa 532 SMART SM00052 260 508 1.7E-76 T 14-10-2018 IPR001633 EAL domain VS_2860 6fd41f0f0027849b92d11d54bdd47376 346 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 10 345 1.7E-131 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VS_2860 6fd41f0f0027849b92d11d54bdd47376 346 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 10 345 3.7E-133 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VS_2860 6fd41f0f0027849b92d11d54bdd47376 346 Pfam PF04958 Arginine N-succinyltransferase beta subunit 8 344 5.8E-138 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VS_2860 6fd41f0f0027849b92d11d54bdd47376 346 Gene3D G3DSA:2.40.40.20 284 346 7.5E-7 T 14-10-2018 VS_2860 6fd41f0f0027849b92d11d54bdd47376 346 SUPERFAMILY SSF55729 8 344 4.58E-130 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2860 6fd41f0f0027849b92d11d54bdd47376 346 Gene3D G3DSA:3.40.630.30 7 281 3.5E-113 T 14-10-2018 VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 Gene3D G3DSA:3.40.50.300 1 266 2.9E-67 T 14-10-2018 VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 Pfam PF00005 ABC transporter 20 170 1.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 SUPERFAMILY SSF52540 3 234 1.2E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 Pfam PF12558 ATP-binding cassette cobalt transporter 234 306 1.5E-20 T 14-10-2018 IPR022216 Putative ABC cobalt transporter VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 Gene3D G3DSA:3.40.50.300 298 558 4.6E-63 T 14-10-2018 VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 SUPERFAMILY SSF52540 285 530 9.69E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 SMART SM00382 324 510 2.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 SMART SM00382 29 221 3.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0188 d8b028d7345a29aa3bcde11de682da7c 564 Pfam PF00005 ABC transporter 315 461 5.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 SUPERFAMILY SSF46689 490 594 3.33E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 SUPERFAMILY SSF52540 285 520 7.23E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 Pfam PF01590 GAF domain 85 186 5.2E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 SMART SM00382 301 445 4.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 Pfam PF00158 Sigma-54 interaction domain 285 446 1.1E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 490 499 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 Gene3D G3DSA:1.10.8.60 454 529 4.9E-13 T 14-10-2018 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 368 383 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 305 318 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 Gene3D G3DSA:1.10.10.60 550 595 1.8E-10 T 14-10-2018 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 Gene3D G3DSA:3.30.450.40 1 188 8.0E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 Gene3D G3DSA:3.40.50.300 268 453 1.6E-56 T 14-10-2018 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 Pfam PF02954 Bacterial regulatory protein, Fis family 562 590 2.9E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 558 575 3.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_II1336 0029785f72b1b4a7006b9b9612481c22 595 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 575 595 3.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_3068 7e643858b84a817e5a5281c7ed58c252 96 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 44 52 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VS_3068 7e643858b84a817e5a5281c7ed58c252 96 SUPERFAMILY SSF54292 6 94 2.75E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_3068 7e643858b84a817e5a5281c7ed58c252 96 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 17 86 7.6E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VS_3068 7e643858b84a817e5a5281c7ed58c252 96 Gene3D G3DSA:3.10.20.30 3 95 5.2E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_2280 98453cea316229d98994d1b7497a1311 284 Gene3D G3DSA:1.25.40.10 197 284 1.8E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2280 98453cea316229d98994d1b7497a1311 284 Gene3D G3DSA:3.40.30.10 1 111 2.6E-23 T 14-10-2018 VS_2280 98453cea316229d98994d1b7497a1311 284 SUPERFAMILY SSF48452 111 245 4.69E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2280 98453cea316229d98994d1b7497a1311 284 Pfam PF00085 Thioredoxin 6 108 3.2E-15 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VS_2280 98453cea316229d98994d1b7497a1311 284 Pfam PF14559 Tetratricopeptide repeat 125 190 3.6E-11 T 14-10-2018 VS_2280 98453cea316229d98994d1b7497a1311 284 Gene3D G3DSA:1.25.40.10 112 196 5.9E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2280 98453cea316229d98994d1b7497a1311 284 SUPERFAMILY SSF52833 3 111 1.46E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2280 98453cea316229d98994d1b7497a1311 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.5E-29 T 14-10-2018 VS_II0817 addfcedfb6dbd8f539da24c7da4688bc 207 Gene3D G3DSA:2.60.120.10 96 205 7.2E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II0817 addfcedfb6dbd8f539da24c7da4688bc 207 SMART SM00530 31 86 1.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II0817 addfcedfb6dbd8f539da24c7da4688bc 207 Gene3D G3DSA:1.10.260.40 22 95 7.4E-15 T 14-10-2018 VS_II0817 addfcedfb6dbd8f539da24c7da4688bc 207 Pfam PF01381 Helix-turn-helix 32 84 2.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II0817 addfcedfb6dbd8f539da24c7da4688bc 207 SUPERFAMILY SSF47413 26 90 1.9E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II0817 addfcedfb6dbd8f539da24c7da4688bc 207 Pfam PF07883 Cupin domain 147 204 2.2E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VS_II0817 addfcedfb6dbd8f539da24c7da4688bc 207 SUPERFAMILY SSF51182 98 204 4.1E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Pfam PF06029 AlkA N-terminal domain 203 315 1.8E-33 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Gene3D G3DSA:1.10.340.30 316 416 3.9E-19 T 14-10-2018 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Gene3D G3DSA:1.10.10.60 88 196 7.6E-22 T 14-10-2018 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 145 187 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 321 435 3.9E-5 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Pfam PF02805 Metal binding domain of Ada 16 79 1.9E-28 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Gene3D G3DSA:3.30.310.20 202 315 4.1E-25 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Gene3D G3DSA:3.40.10.10 5 81 1.7E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 Pfam PF12833 Helix-turn-helix domain 114 192 3.4E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SMART SM00342 108 191 9.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SUPERFAMILY SSF57884 9 94 7.98E-33 T 14-10-2018 IPR035451 Ada-like domain superfamily VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SUPERFAMILY SSF55945 203 297 7.38E-25 T 14-10-2018 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SUPERFAMILY SSF46689 146 193 1.61E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SUPERFAMILY SSF46689 94 140 6.72E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SMART SM00478 325 458 0.0059 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SMART SM01009 202 315 2.3E-36 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VS_II1431 ba4757c568f80f5eba15c57f41accd54 458 SUPERFAMILY SSF48150 306 455 1.1E-27 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VS_II1254 eb48a763461a19e2253cc835b51c6483 98 Gene3D G3DSA:1.10.10.10 1 96 4.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1254 eb48a763461a19e2253cc835b51c6483 98 SUPERFAMILY SSF46785 2 93 3.7E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1254 eb48a763461a19e2253cc835b51c6483 98 Pfam PF12840 Helix-turn-helix domain 8 69 4.4E-11 T 14-10-2018 VS_II1254 eb48a763461a19e2253cc835b51c6483 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 8.7E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_II1254 eb48a763461a19e2253cc835b51c6483 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 8.7E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_II1254 eb48a763461a19e2253cc835b51c6483 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 8.7E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_II1254 eb48a763461a19e2253cc835b51c6483 98 SMART SM00418 8 85 5.5E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_2368 34ba8126881dab67908c2809050b9ca6 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.6E-242 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VS_2368 34ba8126881dab67908c2809050b9ca6 571 PIRSF PIRSF001535 1 571 3.6E-264 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VS_2368 34ba8126881dab67908c2809050b9ca6 571 SUPERFAMILY SSF52954 463 570 2.87E-32 T 14-10-2018 VS_2368 34ba8126881dab67908c2809050b9ca6 571 Gene3D G3DSA:3.40.50.800 4 554 2.5E-234 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VS_2368 34ba8126881dab67908c2809050b9ca6 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.004 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VS_2368 34ba8126881dab67908c2809050b9ca6 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.7E-40 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2368 34ba8126881dab67908c2809050b9ca6 571 Gene3D G3DSA:3.90.960.10 240 389 2.5E-234 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VS_2368 34ba8126881dab67908c2809050b9ca6 571 Pfam PF03129 Anticodon binding domain 475 568 5.8E-22 T 14-10-2018 IPR004154 Anticodon-binding VS_2368 34ba8126881dab67908c2809050b9ca6 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 3.1E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VS_2368 34ba8126881dab67908c2809050b9ca6 571 Gene3D G3DSA:3.30.930.10 11 465 2.5E-234 T 14-10-2018 VS_2368 34ba8126881dab67908c2809050b9ca6 571 SUPERFAMILY SSF55826 218 390 7.19E-31 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VS_2368 34ba8126881dab67908c2809050b9ca6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VS_2368 34ba8126881dab67908c2809050b9ca6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VS_2368 34ba8126881dab67908c2809050b9ca6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VS_2368 34ba8126881dab67908c2809050b9ca6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VS_2368 34ba8126881dab67908c2809050b9ca6 571 SUPERFAMILY SSF55681 10 478 1.03E-98 T 14-10-2018 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 SUPERFAMILY SSF49384 26 198 2.3E-66 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.3E-13 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Gene3D G3DSA:3.20.20.80 330 818 1.1E-159 T 14-10-2018 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 SUPERFAMILY SSF51445 332 773 1.22E-139 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 765 5.1E-106 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Gene3D G3DSA:2.60.40.10 819 883 1.5E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 SUPERFAMILY SSF81296 781 883 3.08E-35 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Gene3D G3DSA:2.60.40.290 25 167 1.4E-56 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 729 745 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 747 764 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.1E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 SMART SM01081 34 195 5.9E-91 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Pfam PF03173 Putative carbohydrate binding domain 35 193 5.4E-63 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Gene3D G3DSA:3.30.379.10 204 329 3.6E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 SUPERFAMILY SSF55545 208 331 1.09E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VS_0765 8548c8495fc0b7b9504601586ef4d61d 884 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 805 880 2.2E-26 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 Gene3D G3DSA:1.20.58.370 17 104 2.5E-33 T 14-10-2018 IPR035277 MalF, N-terminal VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 SUPERFAMILY SSF160964 23 269 2.88E-82 T 14-10-2018 VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 109 269 1.3E-57 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 Gene3D G3DSA:1.10.3720.10 279 521 2.6E-68 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 SUPERFAMILY SSF161098 272 512 3.01E-57 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 Gene3D G3DSA:2.40.430.10 127 213 8.0E-52 T 14-10-2018 VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 Gene3D G3DSA:3.10.650.10 107 277 8.0E-52 T 14-10-2018 VS_II0221 303e646d5e61a91b897b0b125d129dc7 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 306 511 1.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2819 80b8d3de9e6bc11f0c13fb00899fa0b0 179 Pfam PF00281 Ribosomal protein L5 24 80 2.4E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2819 80b8d3de9e6bc11f0c13fb00899fa0b0 179 PIRSF PIRSF002161 1 179 4.1E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2819 80b8d3de9e6bc11f0c13fb00899fa0b0 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.0E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2819 80b8d3de9e6bc11f0c13fb00899fa0b0 179 Gene3D G3DSA:3.30.1440.10 1 179 8.4E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2819 80b8d3de9e6bc11f0c13fb00899fa0b0 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2819 80b8d3de9e6bc11f0c13fb00899fa0b0 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.067 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2819 80b8d3de9e6bc11f0c13fb00899fa0b0 179 SUPERFAMILY SSF55282 4 179 1.46E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 SUPERFAMILY SSF46785 7 86 3.96E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 SUPERFAMILY SSF53850 92 307 3.08E-46 T 14-10-2018 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 Pfam PF03466 LysR substrate binding domain 99 308 1.2E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 Gene3D G3DSA:3.40.190.10 182 280 1.3E-56 T 14-10-2018 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 Gene3D G3DSA:3.40.190.10 94 304 1.3E-56 T 14-10-2018 VS_3091 952ee4ec85ed226432b388a07e11ebfd 313 Gene3D G3DSA:1.10.10.10 2 89 3.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0785 3a99cd18ec865700e053d58b5b95c3a0 86 SUPERFAMILY SSF47336 5 85 2.22E-13 T 14-10-2018 IPR036736 ACP-like superfamily VS_0785 3a99cd18ec865700e053d58b5b95c3a0 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 2.2E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_0785 3a99cd18ec865700e053d58b5b95c3a0 86 Gene3D G3DSA:1.10.1200.10 3 86 1.7E-20 T 14-10-2018 IPR036736 ACP-like superfamily VS_0410 8ef4a538d5db8b989af1247ab3c12fc6 203 Pfam PF08239 Bacterial SH3 domain 32 83 1.4E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VS_0410 8ef4a538d5db8b989af1247ab3c12fc6 203 SMART SM00287 20 86 5.4E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VS_0410 8ef4a538d5db8b989af1247ab3c12fc6 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 9.0E-53 T 14-10-2018 IPR016476 SH3 domain protein VS_0410 8ef4a538d5db8b989af1247ab3c12fc6 203 PIRSF PIRSF006158 1 203 2.5E-69 T 14-10-2018 IPR016476 SH3 domain protein VS_0410 8ef4a538d5db8b989af1247ab3c12fc6 203 Gene3D G3DSA:2.30.30.40 30 86 2.6E-8 T 14-10-2018 VS_1841 94f2169330bd9299dcbe3921977016a6 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VS_1841 94f2169330bd9299dcbe3921977016a6 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1841 94f2169330bd9299dcbe3921977016a6 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1841 94f2169330bd9299dcbe3921977016a6 212 Gene3D G3DSA:1.10.357.10 5 212 8.1E-54 T 14-10-2018 VS_1841 94f2169330bd9299dcbe3921977016a6 212 SUPERFAMILY SSF46689 6 77 3.03E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1841 94f2169330bd9299dcbe3921977016a6 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 4.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1841 94f2169330bd9299dcbe3921977016a6 212 SUPERFAMILY SSF48498 83 210 6.23E-42 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_II0795 68759039a11c612380a75f02f8aeee37 1019 SUPERFAMILY SSF82866 296 491 5.89E-38 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 SUPERFAMILY SSF82714 184 266 2.62E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:3.30.70.1320 136 328 3.7E-262 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1009 1.8E-177 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 SUPERFAMILY SSF82866 791 1013 2.35E-45 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 SUPERFAMILY SSF82693 41 135 1.13E-18 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:3.30.70.1440 653 854 3.7E-262 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:1.20.1640.10 507 1006 3.7E-262 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:3.30.70.1430 40 802 3.7E-262 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:3.30.2090.10 179 270 3.7E-262 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:3.30.70.1430 554 652 3.7E-262 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 SUPERFAMILY SSF82693 136 325 3.09E-21 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 SUPERFAMILY SSF82714 710 786 4.84E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0795 68759039a11c612380a75f02f8aeee37 1019 SUPERFAMILY SSF82693 555 619 2.22E-5 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:1.20.1640.10 10 506 3.7E-262 T 14-10-2018 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 Gene3D G3DSA:3.30.2090.10 704 794 3.7E-262 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0795 68759039a11c612380a75f02f8aeee37 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 7.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 7.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 7.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0795 68759039a11c612380a75f02f8aeee37 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 7.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2501 51abcd9a3e113dd50be173f8a567db38 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 4 124 35.936 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VS_2501 51abcd9a3e113dd50be173f8a567db38 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 3.8E-18 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VS_2501 51abcd9a3e113dd50be173f8a567db38 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 124 2.6E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VS_2501 51abcd9a3e113dd50be173f8a567db38 124 SUPERFAMILY SSF89360 17 110 1.16E-28 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_2501 51abcd9a3e113dd50be173f8a567db38 124 Gene3D G3DSA:2.60.300.12 19 114 9.2E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_2501 51abcd9a3e113dd50be173f8a567db38 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 105 122 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VS_II1052 230de9b82c2adf3bbad13b06112c2184 784 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 783 1.2E-289 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 SUPERFAMILY SSF141868 535 783 4.45E-82 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 515 2.4E-39 T 14-10-2018 IPR000160 GGDEF domain VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 Pfam PF00563 EAL domain 536 770 1.1E-67 T 14-10-2018 IPR001633 EAL domain VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 Gene3D G3DSA:3.20.20.450 533 786 3.2E-87 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 Gene3D G3DSA:3.30.450.20 57 210 2.2E-5 T 14-10-2018 VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 517 1.4E-32 T 14-10-2018 IPR000160 GGDEF domain VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 SMART SM00052 530 775 3.4E-98 T 14-10-2018 IPR001633 EAL domain VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 Gene3D G3DSA:3.30.70.270 358 532 1.4E-48 T 14-10-2018 VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 SMART SM00267 353 520 4.1E-48 T 14-10-2018 IPR000160 GGDEF domain VS_II0482 b90dcbe531f5dfc076f34330c143d720 795 SUPERFAMILY SSF55073 369 520 1.88E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 SUPERFAMILY SSF52283 1 172 5.1E-53 T 14-10-2018 VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 141 6.7E-48 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 Gene3D G3DSA:3.40.50.720 3 369 2.1E-157 T 14-10-2018 VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 SMART SM01002 150 315 3.2E-79 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 145 372 4.8E-73 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 431 514 6.0E-36 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 SMART SM01003 4 141 2.1E-70 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 PIRSF PIRSF000203 1 514 6.5E-271 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 Gene3D G3DSA:3.40.50.720 141 322 2.1E-157 T 14-10-2018 VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 SUPERFAMILY SSF51735 141 318 2.98E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0732 450bf7e6284adfc3b427ef27d080b3fb 515 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 514 1.4E-276 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Pfam PF00330 Aconitase family (aconitate hydratase) 478 824 1.1E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 SUPERFAMILY SSF53732 386 866 3.92E-145 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Gene3D G3DSA:3.30.499.10 408 535 4.2E-146 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 PIRSF PIRSF036687 8 865 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 SUPERFAMILY SSF74778 11 168 1.2E-65 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Pfam PF06434 Aconitate hydratase 2 N-terminus 177 388 2.8E-95 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Pfam PF11791 Aconitate B N-terminal domain 13 165 5.1E-65 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 10 860 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Gene3D G3DSA:3.40.1060.10 391 687 4.2E-146 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 ProSitePatterns PS01244 Aconitase family signature 2. 767 780 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Gene3D G3DSA:3.30.499.10 689 871 9.4E-71 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Gene3D G3DSA:3.20.19.10 171 367 9.0E-76 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 Gene3D G3DSA:1.25.40.310 10 169 1.3E-69 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VS_2522 72e92a43614f3cd3152a992aafa1a88f 871 SUPERFAMILY SSF52016 171 378 6.28E-67 T 14-10-2018 VS_0348 c25322aa25ed8923597673c9e9e83fe4 481 Gene3D G3DSA:3.30.2290.10 9 240 1.2E-15 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VS_0348 c25322aa25ed8923597673c9e9e83fe4 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 5.5E-65 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VS_0348 c25322aa25ed8923597673c9e9e83fe4 481 PIRSF PIRSF004919 15 481 2.4E-143 T 14-10-2018 IPR025502 TldD VS_0348 c25322aa25ed8923597673c9e9e83fe4 481 SUPERFAMILY SSF111283 18 480 9.16E-130 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VS_II0450 8d38692d56233ce0c63efdcca56838f8 298 SUPERFAMILY SSF161111 7 214 3.14E-37 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VS_II0450 8d38692d56233ce0c63efdcca56838f8 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 279 2.6E-31 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VS_II0450 8d38692d56233ce0c63efdcca56838f8 298 Gene3D G3DSA:1.20.1510.10 9 214 1.5E-25 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VS_II0450 8d38692d56233ce0c63efdcca56838f8 298 Pfam PF01545 Cation efflux family 14 214 1.6E-37 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VS_3098 85c51d19cff171cc4f8fe302ae0afdf6 649 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 1.3E-219 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VS_3098 85c51d19cff171cc4f8fe302ae0afdf6 649 Pfam PF13667 ThiC-associated domain 22 104 1.7E-32 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VS_3098 85c51d19cff171cc4f8fe302ae0afdf6 649 Gene3D G3DSA:3.20.20.540 214 527 4.2E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VS_3098 85c51d19cff171cc4f8fe302ae0afdf6 649 Pfam PF01964 Radical SAM ThiC family 144 592 2.1E-199 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VS_3098 85c51d19cff171cc4f8fe302ae0afdf6 649 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.845 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VS_II1311 e9ebe79061f1f753f7cc4b0ee6616e06 140 Gene3D G3DSA:3.30.300.20 44 140 8.2E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_II1311 e9ebe79061f1f753f7cc4b0ee6616e06 140 Gene3D G3DSA:2.20.25.10 1 43 3.1E-20 T 14-10-2018 VS_II1311 e9ebe79061f1f753f7cc4b0ee6616e06 140 SUPERFAMILY SSF82784 1 135 4.19E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VS_II1311 e9ebe79061f1f753f7cc4b0ee6616e06 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 2.5E-54 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 VS_II1311 e9ebe79061f1f753f7cc4b0ee6616e06 140 Pfam PF02566 OsmC-like protein 38 133 6.7E-19 T 14-10-2018 IPR003718 OsmC/Ohr family VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 3.7E-24 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Pfam PF00013 KH domain 557 615 4.7E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Gene3D G3DSA:3.30.230.70 2 229 1.2E-75 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Gene3D G3DSA:2.40.50.140 623 694 2.6E-29 T 14-10-2018 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SUPERFAMILY SSF46915 239 321 2.14E-19 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SUPERFAMILY SSF50249 608 694 3.77E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SUPERFAMILY SSF54211 300 493 2.89E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 3.6E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 2.2E-18 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SUPERFAMILY SSF54211 5 145 1.01E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SUPERFAMILY SSF55666 451 550 1.54E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Gene3D G3DSA:3.30.230.70 235 550 3.7E-113 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SUPERFAMILY SSF55666 146 236 4.35E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.006 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SUPERFAMILY SSF54791 553 630 6.98E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 5.8E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SMART SM00322 553 618 1.2E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 SMART SM00316 621 691 3.2E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 PIRSF PIRSF005499 2 706 1.5E-294 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Pfam PF00575 S1 RNA binding domain 620 691 1.1E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2478 6deae382f4512abf02d7e9d20c10820e 706 Gene3D G3DSA:3.30.1370.10 551 622 5.0E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VS_1486 a4958ca5b4524fb4480b76f20197a8a9 67 PIRSF PIRSF036704 1 67 5.7E-32 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VS_1486 a4958ca5b4524fb4480b76f20197a8a9 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 37 4.5E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VS_1486 a4958ca5b4524fb4480b76f20197a8a9 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 67 1.4E-30 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VS_1486 a4958ca5b4524fb4480b76f20197a8a9 67 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 32 4.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VS_II0161 e8a492654644b4d1dff725d476de06a8 955 SUPERFAMILY SSF48208 387 867 1.98E-59 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VS_II0161 e8a492654644b4d1dff725d476de06a8 955 Pfam PF06202 Amylo-alpha-1,6-glucosidase 417 792 1.4E-96 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 VS_II0161 e8a492654644b4d1dff725d476de06a8 955 Gene3D G3DSA:1.50.10.10 436 792 3.2E-36 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VS_II0061 a54ba905934c6f89ab2405435c540d98 395 Pfam PF00005 ABC transporter 43 196 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0061 a54ba905934c6f89ab2405435c540d98 395 Gene3D G3DSA:3.40.50.300 30 318 3.6E-67 T 14-10-2018 VS_II0061 a54ba905934c6f89ab2405435c540d98 395 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 387 3.6E-181 T 14-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 VS_II0061 a54ba905934c6f89ab2405435c540d98 395 SUPERFAMILY SSF52540 42 274 8.44E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0061 a54ba905934c6f89ab2405435c540d98 395 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0061 a54ba905934c6f89ab2405435c540d98 395 SMART SM00382 52 254 6.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 SUPERFAMILY SSF55874 498 653 1.7E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 546 654 2.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 Gene3D G3DSA:1.20.1480.50 308 410 9.2E-10 T 14-10-2018 VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 SUPERFAMILY SSF47384 435 507 2.16E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 Gene3D G3DSA:3.30.565.10 508 654 3.8E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 598 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 652 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 633 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 612 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 Gene3D G3DSA:1.10.287.130 414 501 1.9E-17 T 14-10-2018 VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 SMART SM00387 545 655 1.7E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1289 303449d179c2b325d8ff1256f8e449f6 657 SMART SM00388 438 506 0.0015 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0224 b66b84c91f950322eb65e56196520e70 167 Pfam PF03061 Thioesterase superfamily 28 102 4.1E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VS_II0224 b66b84c91f950322eb65e56196520e70 167 SUPERFAMILY SSF54637 11 156 3.5E-40 T 14-10-2018 IPR029069 HotDog domain superfamily VS_II0224 b66b84c91f950322eb65e56196520e70 167 Gene3D G3DSA:3.10.129.10 3 166 1.5E-41 T 14-10-2018 VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 153 2.1E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.1E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 62 73 2.1E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 170 2.1E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 210 2.1E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 SUPERFAMILY SSF51735 11 225 5.64E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 46 223 8.9E-30 T 14-10-2018 VS_II1477 91958eb890b58aa8ffd9ae112e8c9b82 227 Gene3D G3DSA:3.40.50.720 6 227 1.7E-54 T 14-10-2018 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Gene3D G3DSA:1.10.287.1150 85 167 1.0E-29 T 14-10-2018 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Pfam PF02779 Transketolase, pyrimidine binding domain 594 789 7.2E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 3.9E-16 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 934 6.8E-53 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Gene3D G3DSA:3.40.50.970 168 535 1.8E-145 T 14-10-2018 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 SUPERFAMILY SSF52518 578 795 7.23E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Gene3D G3DSA:3.40.50.11610 725 931 4.1E-172 T 14-10-2018 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 PIRSF PIRSF000157 1 936 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Gene3D G3DSA:3.40.50.12470 558 804 4.1E-172 T 14-10-2018 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 SUPERFAMILY SSF52518 122 532 6.04E-86 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 SMART SM00861 595 788 1.6E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 934 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VS_2243 89c3ef91a23da5d94ab09ab202dbf36f 939 Pfam PF00676 Dehydrogenase E1 component 221 515 6.1E-48 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:1.20.1640.10 10 500 1.2E-287 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.0E-274 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 SUPERFAMILY SSF82866 782 1008 4.97E-48 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 SUPERFAMILY SSF82693 136 323 1.4E-20 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.4E-74 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:3.30.70.1430 555 647 1.2E-287 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 SUPERFAMILY SSF82693 41 130 6.63E-23 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:3.30.70.1320 134 325 1.2E-287 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:1.20.1640.10 501 1001 1.2E-287 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:3.30.2090.10 698 786 1.2E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 SUPERFAMILY SSF82714 182 263 1.44E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:3.30.70.1430 40 794 1.2E-287 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 SUPERFAMILY SSF82866 290 489 2.62E-46 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 SUPERFAMILY SSF82693 553 650 5.23E-20 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:3.30.70.1440 648 843 1.2E-287 T 14-10-2018 VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 Gene3D G3DSA:3.30.2090.10 178 268 1.2E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_0063 bd6a4e0f684bde3b419e6b7cd68b7f8b 1040 SUPERFAMILY SSF82714 701 783 5.36E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1029 12f3a8aaafd8785b946a8465c9425ace 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VS_1029 12f3a8aaafd8785b946a8465c9425ace 210 Pfam PF02223 Thymidylate kinase 9 199 1.2E-55 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VS_1029 12f3a8aaafd8785b946a8465c9425ace 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.8E-60 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VS_1029 12f3a8aaafd8785b946a8465c9425ace 210 SUPERFAMILY SSF52540 1 209 1.91E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1029 12f3a8aaafd8785b946a8465c9425ace 210 Gene3D G3DSA:3.40.50.300 4 209 2.9E-62 T 14-10-2018 VS_1029 12f3a8aaafd8785b946a8465c9425ace 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.557 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 2.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 2.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 2.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 2.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 SUPERFAMILY SSF47384 170 221 1.73E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 SUPERFAMILY SSF52172 562 682 2.13E-35 T 14-10-2018 IPR011006 CheY-like superfamily VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 Pfam PF00072 Response regulator receiver domain 566 678 5.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 Gene3D G3DSA:1.10.287.130 168 259 7.4E-6 T 14-10-2018 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 Gene3D G3DSA:3.40.50.2300 554 682 1.9E-36 T 14-10-2018 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 Gene3D G3DSA:3.30.565.10 260 412 1.8E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 Pfam PF00512 His Kinase A (phospho-acceptor) domain 184 257 1.1E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 SMART SM00448 564 678 1.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 411 2.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 SUPERFAMILY SSF55874 251 416 5.76E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1725 2b3c90ecf0cf924dc9452ec8ca13119b 682 SMART SM00387 306 414 7.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2408 4e2c799852aff203679f749754f39695 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 299 1.4E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VS_2408 4e2c799852aff203679f749754f39695 325 SUPERFAMILY SSF55326 4 138 6.15E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_2408 4e2c799852aff203679f749754f39695 325 PIRSF PIRSF005303 2 322 3.6E-80 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VS_2408 4e2c799852aff203679f749754f39695 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 322 26.875 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VS_2408 4e2c799852aff203679f749754f39695 325 Gene3D G3DSA:3.90.650.10 146 322 3.2E-49 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_2408 4e2c799852aff203679f749754f39695 325 SUPERFAMILY SSF56042 143 299 8.67E-33 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_2408 4e2c799852aff203679f749754f39695 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 2.2E-102 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VS_2408 4e2c799852aff203679f749754f39695 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 1.5E-20 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VS_2408 4e2c799852aff203679f749754f39695 325 Gene3D G3DSA:3.30.1330.10 2 144 4.0E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_II1144 496810a09dbd31a9d9aa3678a4be4c78 395 SUPERFAMILY SSF111369 66 308 8.24E-61 T 14-10-2018 VS_II1144 496810a09dbd31a9d9aa3678a4be4c78 395 Gene3D G3DSA:2.40.30.170 69 293 1.4E-72 T 14-10-2018 VS_II1144 496810a09dbd31a9d9aa3678a4be4c78 395 Gene3D G3DSA:2.40.50.100 75 218 1.4E-72 T 14-10-2018 VS_II1144 496810a09dbd31a9d9aa3678a4be4c78 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 301 2.1E-12 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II1144 496810a09dbd31a9d9aa3678a4be4c78 395 Gene3D G3DSA:2.40.420.20 294 388 1.5E-19 T 14-10-2018 VS_II1144 496810a09dbd31a9d9aa3678a4be4c78 395 Gene3D G3DSA:1.10.287.470 110 183 1.4E-72 T 14-10-2018 VS_II1144 496810a09dbd31a9d9aa3678a4be4c78 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 388 6.7E-79 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II0953 e9d4474a5340fcce3522408a85c50b8a 464 Pfam PF00384 Molybdopterin oxidoreductase 19 106 1.2E-22 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_II0953 e9d4474a5340fcce3522408a85c50b8a 464 Gene3D G3DSA:3.40.50.740 17 189 6.6E-45 T 14-10-2018 VS_II0953 e9d4474a5340fcce3522408a85c50b8a 464 SUPERFAMILY SSF50692 200 361 2.06E-33 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VS_II0953 e9d4474a5340fcce3522408a85c50b8a 464 Gene3D G3DSA:2.40.40.20 198 343 7.5E-36 T 14-10-2018 VS_II0953 e9d4474a5340fcce3522408a85c50b8a 464 Pfam PF01568 Molydopterin dinucleotide binding domain 209 331 1.1E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VS_II0953 e9d4474a5340fcce3522408a85c50b8a 464 SUPERFAMILY SSF53706 18 227 1.57E-49 T 14-10-2018 VS_1424 3ce140a5103c64f6f399af7087028d44 706 SUPERFAMILY SSF53335 399 705 1.32E-67 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1424 3ce140a5103c64f6f399af7087028d44 706 Gene3D G3DSA:3.30.750.80 396 487 1.3E-34 T 14-10-2018 VS_1424 3ce140a5103c64f6f399af7087028d44 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_1424 3ce140a5103c64f6f399af7087028d44 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.674 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VS_1424 3ce140a5103c64f6f399af7087028d44 706 SMART SM00981 56 154 3.0E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VS_1424 3ce140a5103c64f6f399af7087028d44 706 Gene3D G3DSA:3.30.2130.30 6 255 2.8E-137 T 14-10-2018 VS_1424 3ce140a5103c64f6f399af7087028d44 706 PIRSF PIRSF037618 1 706 6.2E-297 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VS_1424 3ce140a5103c64f6f399af7087028d44 706 Gene3D G3DSA:3.40.50.150 488 706 1.6E-74 T 14-10-2018 VS_1424 3ce140a5103c64f6f399af7087028d44 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 5.4E-63 T 14-10-2018 IPR000241 Putative RNA methylase domain VS_1424 3ce140a5103c64f6f399af7087028d44 706 Gene3D G3DSA:3.40.50.150 169 371 2.8E-137 T 14-10-2018 VS_1424 3ce140a5103c64f6f399af7087028d44 706 SUPERFAMILY SSF53335 139 371 1.27E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1424 3ce140a5103c64f6f399af7087028d44 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 434 662 1.8E-28 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VS_1424 3ce140a5103c64f6f399af7087028d44 706 Pfam PF02926 THUMP domain 31 153 1.5E-12 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VS_1424 3ce140a5103c64f6f399af7087028d44 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 14-10-2018 IPR000241 Putative RNA methylase domain VS_2182 e03777e97f72117f5329cb846d493981 624 Pfam PF07690 Major Facilitator Superfamily 19 383 3.6E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_2182 e03777e97f72117f5329cb846d493981 624 Gene3D G3DSA:1.20.1250.20 10 422 1.6E-29 T 14-10-2018 VS_2182 e03777e97f72117f5329cb846d493981 624 Pfam PF01553 Acyltransferase 442 567 1.1E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_2182 e03777e97f72117f5329cb846d493981 624 SUPERFAMILY SSF103473 10 423 1.11E-29 T 14-10-2018 IPR036259 MFS transporter superfamily VS_2182 e03777e97f72117f5329cb846d493981 624 SMART SM00563 456 570 1.6E-34 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_2182 e03777e97f72117f5329cb846d493981 624 SUPERFAMILY SSF69593 414 570 1.7E-29 T 14-10-2018 VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 Gene3D G3DSA:3.30.70.920 57 149 2.6E-14 T 14-10-2018 VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 4.1E-15 T 14-10-2018 VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 SUPERFAMILY SSF46785 1 56 9.34E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 SMART SM00344 1 111 6.9E-16 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 140 4.1E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 SUPERFAMILY SSF54909 65 144 4.96E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 6.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 6.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 6.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0339 d4a55412f8bd65189b36035eac89e6ec 153 Gene3D G3DSA:1.10.10.10 1 52 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1462 7ef643abcc4f66c9370c2daccfa18f46 224 SUPERFAMILY SSF51735 2 212 4.44E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II1462 7ef643abcc4f66c9370c2daccfa18f46 224 Gene3D G3DSA:3.40.50.720 1 224 2.6E-49 T 14-10-2018 VS_II1462 7ef643abcc4f66c9370c2daccfa18f46 224 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_II1462 7ef643abcc4f66c9370c2daccfa18f46 224 Pfam PF00106 short chain dehydrogenase 2 185 5.9E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1462 7ef643abcc4f66c9370c2daccfa18f46 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1462 7ef643abcc4f66c9370c2daccfa18f46 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1462 7ef643abcc4f66c9370c2daccfa18f46 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0787 5dfb65194d4beb684e9c796852c491d7 259 SUPERFAMILY SSF53901 29 166 9.87E-9 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0787 5dfb65194d4beb684e9c796852c491d7 259 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 249 9.3E-78 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 626 46.012 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 4.4E-121 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 Pfam PF02780 Transketolase, C-terminal domain 505 617 7.9E-26 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 SUPERFAMILY SSF52518 317 504 8.0E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 3.8E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 SUPERFAMILY SSF52922 492 625 8.25E-30 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 SMART SM00861 319 483 1.8E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 Gene3D G3DSA:3.40.50.970 316 489 3.4E-65 T 14-10-2018 VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 625 3.8E-301 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 Gene3D G3DSA:3.40.50.920 495 627 1.8E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 SUPERFAMILY SSF52518 9 381 3.4E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2406 8de1a2bbb0e766ce286b2b28a31b0181 627 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_0247 df0c7842ad91148fc300de2e74563c7f 254 SUPERFAMILY SSF54292 5 106 4.33E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_0247 df0c7842ad91148fc300de2e74563c7f 254 Pfam PF13183 4Fe-4S dicluster domain 147 219 1.7E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_0247 df0c7842ad91148fc300de2e74563c7f 254 Gene3D G3DSA:3.10.20.30 1 106 4.6E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_0247 df0c7842ad91148fc300de2e74563c7f 254 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_0247 df0c7842ad91148fc300de2e74563c7f 254 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 3.6E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0247 df0c7842ad91148fc300de2e74563c7f 254 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VS_0247 df0c7842ad91148fc300de2e74563c7f 254 SUPERFAMILY SSF46548 107 226 2.79E-30 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_0247 df0c7842ad91148fc300de2e74563c7f 254 Gene3D G3DSA:1.10.1060.10 107 244 9.8E-50 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_0247 df0c7842ad91148fc300de2e74563c7f 254 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 2.1E-93 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 Gene3D G3DSA:3.40.50.2300 165 294 4.0E-76 T 14-10-2018 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 1.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 1.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 SUPERFAMILY SSF53822 67 333 1.08E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 Gene3D G3DSA:1.10.260.40 5 66 1.3E-17 T 14-10-2018 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 Gene3D G3DSA:3.40.50.2300 67 310 4.0E-76 T 14-10-2018 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 9.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 SUPERFAMILY SSF47413 6 58 1.89E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 SMART SM00354 7 77 4.6E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1383 3cbdcfc116e43680cfe2fad5afbaa557 337 Pfam PF13377 Periplasmic binding protein-like domain 175 332 6.4E-35 T 14-10-2018 VS_0019 9b390e1722a36f19bf41ef6d35541260 435 Pfam PF00263 Bacterial type II and III secretion system protein 230 387 3.6E-39 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VS_0019 9b390e1722a36f19bf41ef6d35541260 435 Pfam PF13629 Pilus formation protein N terminal region 18 86 4.4E-15 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VS_0019 9b390e1722a36f19bf41ef6d35541260 435 PRINTS PR00811 Bacterial general secretion pathway protein D signature 181 191 6.2E-6 T 14-10-2018 IPR001775 GspD/PilQ family VS_0019 9b390e1722a36f19bf41ef6d35541260 435 PRINTS PR00811 Bacterial general secretion pathway protein D signature 352 370 6.2E-6 T 14-10-2018 IPR001775 GspD/PilQ family VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 SMART SM00535 20 148 1.3E-55 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 SUPERFAMILY SSF69065 5 158 5.23E-51 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 7.4E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.109 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 Gene3D G3DSA:1.10.1520.10 3 149 1.9E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 SMART SM00358 155 223 3.9E-23 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 Pfam PF14622 Ribonuclease-III-like 19 140 6.9E-33 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 Gene3D G3DSA:3.30.160.20 153 225 6.5E-20 T 14-10-2018 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 5.6E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VS_2619 a5b573f1fc2607aef4d27e3e9d6ac71c 225 SUPERFAMILY SSF54768 108 222 2.67E-28 T 14-10-2018 VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 Gene3D G3DSA:3.40.190.10 113 205 8.7E-74 T 14-10-2018 VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 SMART SM00062 26 247 1.5E-71 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 Gene3D G3DSA:3.40.190.10 30 244 8.7E-74 T 14-10-2018 VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 SMART SM00079 26 247 0.0016 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 247 1.3E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 SUPERFAMILY SSF53850 1 246 5.44E-66 T 14-10-2018 VS_1563 b1cd601635bf8a9909248c3d2492ff65 247 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 245 2.3E-81 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VS_II1306 71d216810c341498be54669141548e2b 475 SUPERFAMILY SSF53383 112 473 1.95E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II1306 71d216810c341498be54669141548e2b 475 SUPERFAMILY SSF46785 7 76 3.54E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1306 71d216810c341498be54669141548e2b 475 Gene3D G3DSA:3.90.1150.10 103 470 4.5E-76 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II1306 71d216810c341498be54669141548e2b 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 5.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II1306 71d216810c341498be54669141548e2b 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 5.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II1306 71d216810c341498be54669141548e2b 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 6.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II1306 71d216810c341498be54669141548e2b 475 Gene3D G3DSA:3.40.640.10 142 358 4.5E-76 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II1306 71d216810c341498be54669141548e2b 475 SMART SM00345 13 72 1.1E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II1306 71d216810c341498be54669141548e2b 475 Gene3D G3DSA:1.10.10.10 2 73 2.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1306 71d216810c341498be54669141548e2b 475 Pfam PF00155 Aminotransferase class I and II 147 456 4.3E-23 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF141072 974 1077 3.14E-6 T 14-10-2018 IPR038081 CalX-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF141072 165 276 8.37E-12 T 14-10-2018 IPR038081 CalX-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Gene3D G3DSA:2.60.40.2030 566 714 3.0E-5 T 14-10-2018 IPR038081 CalX-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Gene3D G3DSA:2.150.10.10 1740 1856 2.6E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Gene3D G3DSA:3.40.50.410 1254 1460 2.7E-22 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1724 1742 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SMART SM00327 1252 1436 1.3E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1733 1751 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF51120 1623 1816 7.85E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1138 1245 6.2E-19 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF141072 690 791 3.14E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF53300 1253 1408 3.97E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF141072 303 413 6.02E-12 T 14-10-2018 IPR038081 CalX-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1742 1760 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF141072 436 548 5.49E-13 T 14-10-2018 IPR038081 CalX-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1700 1717 0.19 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1737 1753 0.0097 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1718 1734 0.16 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1754 1771 0.53 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF03160 Calx-beta domain 160 257 3.6 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF03160 Calx-beta domain 558 660 0.025 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF03160 Calx-beta domain 898 935 0.83 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF03160 Calx-beta domain 290 394 0.053 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF03160 Calx-beta domain 750 786 5.1 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF03160 Calx-beta domain 425 527 0.067 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 PRINTS PR00313 NodO calcium binding signature 1725 1736 8.0E-8 T 14-10-2018 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 PRINTS PR00313 NodO calcium binding signature 1746 1754 8.0E-8 T 14-10-2018 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 PRINTS PR00313 NodO calcium binding signature 1755 1763 8.0E-8 T 14-10-2018 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 PRINTS PR00313 NodO calcium binding signature 1764 1773 8.0E-8 T 14-10-2018 VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 SUPERFAMILY SSF141072 569 680 3.92E-13 T 14-10-2018 IPR038081 CalX-like domain superfamily VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Gene3D G3DSA:2.150.10.10 1645 1739 5.3E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 Pfam PF13519 von Willebrand factor type A domain 1257 1368 8.1E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_1394 13d98fd9ae5417fed9cafbfd3f4407e9 1883 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1715 1733 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VS_0772 53cf1149621e651d3420501517136d2f 154 Gene3D G3DSA:3.10.129.10 1 143 8.6E-24 T 14-10-2018 VS_0772 53cf1149621e651d3420501517136d2f 154 SUPERFAMILY SSF54637 7 142 1.6E-28 T 14-10-2018 IPR029069 HotDog domain superfamily VS_0772 53cf1149621e651d3420501517136d2f 154 PIRSF PIRSF020565 1 154 9.1E-61 T 14-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:3.30.70.1440 672 866 8.8E-239 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 SUPERFAMILY SSF82714 731 802 1.23E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 SUPERFAMILY SSF82714 187 270 5.36E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 SUPERFAMILY SSF82693 50 137 2.51E-14 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.0E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 2.0E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.0E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 2.0E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 2.0E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 2.0E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 SUPERFAMILY SSF82866 808 1026 6.54E-42 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:1.20.1640.10 18 513 8.8E-239 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:3.30.2090.10 182 273 8.8E-239 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:3.30.70.1430 48 813 8.8E-239 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:3.30.70.1430 571 671 8.8E-239 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:3.30.70.1320 141 330 8.8E-239 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Pfam PF00873 AcrB/AcrD/AcrF family 12 1025 3.1E-152 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:3.30.2090.10 718 805 8.8E-239 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 Gene3D G3DSA:1.20.1640.10 514 1022 8.8E-239 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 SUPERFAMILY SSF82693 149 328 6.54E-10 T 14-10-2018 VS_II0591 486bb820fdc2c10becf85ec65995b8ba 1052 SUPERFAMILY SSF82866 296 493 2.49E-34 T 14-10-2018 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 SMART SM01005 233 357 4.2E-69 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 60 78 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 287 304 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 339 352 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 249 264 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 192 219 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 120 132 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 26 42 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 266 281 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 PRINTS PR00992 Alanine racemase signature 155 166 7.5E-71 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 Hamap MF_01201 Alanine racemase. 1 357 34.96 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 4.8E-67 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 SUPERFAMILY SSF50621 227 357 1.01E-46 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 TIGRFAM TIGR00492 alr: alanine racemase 3 357 4.1E-129 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 Gene3D G3DSA:2.40.37.10 8 352 7.9E-130 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 3.5E-42 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 SUPERFAMILY SSF51419 8 234 2.04E-68 T 14-10-2018 IPR029066 PLP-binding barrel VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_0285 23bce4e7b32289aa915bccc09d9faf8b 358 Gene3D G3DSA:3.20.20.10 10 217 7.9E-130 T 14-10-2018 IPR029066 PLP-binding barrel VS_1322 8a8d365302e85d2be43cb7ff4f46431c 316 Gene3D G3DSA:2.60.200.20 3 113 9.7E-21 T 14-10-2018 VS_1322 8a8d365302e85d2be43cb7ff4f46431c 316 SUPERFAMILY SSF49879 17 103 1.24E-23 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VS_1322 8a8d365302e85d2be43cb7ff4f46431c 316 Pfam PF00498 FHA domain 29 95 4.7E-16 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VS_1322 8a8d365302e85d2be43cb7ff4f46431c 316 SMART SM00240 27 78 1.3E-7 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Gene3D G3DSA:2.10.10.20 16 87 1.2E-13 T 14-10-2018 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Gene3D G3DSA:2.10.10.20 993 1052 7.5E-21 T 14-10-2018 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 ProSitePatterns PS01095 Chitinases family 18 active site. 468 476 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Pfam PF14600 Cellulose-binding domain 997 1051 2.9E-18 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Gene3D G3DSA:2.60.40.10 193 282 3.6E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Pfam PF06483 Chitinase C 807 972 1.9E-71 T 14-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 SUPERFAMILY SSF51055 22 86 9.55E-16 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 SUPERFAMILY SSF51445 313 783 4.03E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 SUPERFAMILY SSF51055 995 1051 1.23E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Pfam PF00704 Glycosyl hydrolases family 18 320 779 9.9E-86 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Gene3D G3DSA:3.20.20.80 300 643 1.3E-80 T 14-10-2018 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 SUPERFAMILY SSF54556 626 749 8.7E-15 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Gene3D G3DSA:3.20.20.80 756 780 2.7E-14 T 14-10-2018 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Gene3D G3DSA:3.10.50.10 691 755 2.7E-14 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 Gene3D G3DSA:2.60.40.10 95 186 1.8E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 SMART SM00636 319 779 6.3E-121 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 SMART SM00495 1008 1050 1.2E-9 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_II0546 83c0222ec607003ef5c312e63bb1efb8 1052 SMART SM00495 37 83 4.9E-13 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_0229 f5c085c4ac6e26f472427c8aecd276ba 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 165 7.0E-65 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VS_0229 f5c085c4ac6e26f472427c8aecd276ba 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 3.4E-71 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VS_0229 f5c085c4ac6e26f472427c8aecd276ba 182 SUPERFAMILY SSF51182 1 179 7.2E-74 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_0229 f5c085c4ac6e26f472427c8aecd276ba 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 6.2E-77 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VS_0229 f5c085c4ac6e26f472427c8aecd276ba 182 Gene3D G3DSA:2.60.120.10 1 182 1.1E-71 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 6.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 SUPERFAMILY SSF46785 8 87 7.79E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 SUPERFAMILY SSF53850 95 302 7.91E-41 T 14-10-2018 VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 Pfam PF03466 LysR substrate binding domain 94 296 9.8E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 Gene3D G3DSA:1.10.10.10 7 95 1.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1276 9eec5565e8f513d9143fe6a5bf86745b 303 Gene3D G3DSA:3.40.190.290 97 296 8.0E-60 T 14-10-2018 VS_2901 f9c047491cafa40f94def7edaab8055d 182 Gene3D G3DSA:3.60.20.10 1 173 3.5E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_2901 f9c047491cafa40f94def7edaab8055d 182 Pfam PF00227 Proteasome subunit 2 169 3.2E-23 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VS_2901 f9c047491cafa40f94def7edaab8055d 182 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.1E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VS_2901 f9c047491cafa40f94def7edaab8055d 182 PIRSF PIRSF039093 1 175 8.6E-88 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VS_2901 f9c047491cafa40f94def7edaab8055d 182 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.067 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VS_2901 f9c047491cafa40f94def7edaab8055d 182 SUPERFAMILY SSF56235 2 172 1.91E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 SUPERFAMILY SSF52343 104 235 2.1E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 SUPERFAMILY SSF63380 2 101 2.22E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 3.1E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 3.1E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 3.1E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 3.1E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 3.1E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 Gene3D G3DSA:3.40.50.80 103 237 8.9E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.4E-22 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 Pfam PF00970 Oxidoreductase FAD-binding domain 5 98 1.0E-4 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VS_3067 0587b9ef404f6f68f2f0ef3364bcaa9e 237 Gene3D G3DSA:2.40.30.10 1 102 4.3E-23 T 14-10-2018 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 SUPERFAMILY SSF56024 306 472 3.14E-22 T 14-10-2018 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 SMART SM00155 167 194 0.0038 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 SMART SM00155 405 432 0.0017 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 Gene3D G3DSA:3.30.870.10 296 472 1.9E-26 T 14-10-2018 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 Pfam PF13091 PLD-like domain 314 458 6.1E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 Pfam PF13091 PLD-like domain 77 226 9.4E-18 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 SUPERFAMILY SSF56024 19 260 4.04E-45 T 14-10-2018 VS_II0107 b03ac91d5708fa1447e822f0ee16f22e 510 Gene3D G3DSA:3.30.870.10 51 244 6.8E-42 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 SUPERFAMILY SSF54810 397 517 4.97E-51 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 Gene3D G3DSA:3.30.300.10 398 517 4.4E-51 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.3E-156 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 Gene3D G3DSA:3.40.50.880 6 201 8.1E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 SUPERFAMILY SSF52317 8 229 5.88E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 Gene3D G3DSA:3.40.50.620 202 397 7.3E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.2E-7 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.2E-7 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.2E-7 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 9.0E-85 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.3E-6 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.3E-6 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.3E-6 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.431 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 Pfam PF00117 Glutamine amidotransferase class-I 12 192 1.7E-43 T 14-10-2018 IPR017926 Glutamine amidotransferase VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 Pfam PF02540 NAD synthase 212 285 2.7E-8 T 14-10-2018 IPR022310 NAD/GMP synthase VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.0E-7 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.0E-7 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.0E-7 T 14-10-2018 VS_0629 46275c8f49b3d3e5aa5b3156cc0d0ecb 517 SUPERFAMILY SSF52402 189 412 9.48E-59 T 14-10-2018 VS_1954 788ca822abe640342ab781618e2a3a15 246 Pfam PF14520 Helix-hairpin-helix domain 194 245 7.3E-11 T 14-10-2018 VS_1954 788ca822abe640342ab781618e2a3a15 246 SUPERFAMILY SSF47781 157 245 9.21E-20 T 14-10-2018 IPR010994 RuvA domain 2-like VS_1954 788ca822abe640342ab781618e2a3a15 246 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 23 178 1.7E-43 T 14-10-2018 IPR001162 UvrC family homology region VS_1954 788ca822abe640342ab781618e2a3a15 246 Gene3D G3DSA:3.30.420.340 15 188 8.7E-46 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily VS_1954 788ca822abe640342ab781618e2a3a15 246 Gene3D G3DSA:1.10.150.20 191 246 1.7E-25 T 14-10-2018 VS_1954 788ca822abe640342ab781618e2a3a15 246 SMART SM00278 192 211 0.56 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VS_1954 788ca822abe640342ab781618e2a3a15 246 SMART SM00278 224 243 18.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 228 244 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 82 90 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 188 195 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 16 290 5.7E-107 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 SUPERFAMILY SSF51658 16 289 9.43E-99 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 Pfam PF01261 Xylose isomerase-like TIM barrel 33 252 8.7E-42 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 Gene3D G3DSA:3.20.20.150 14 296 2.9E-112 T 14-10-2018 VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 SMART SM00518 16 292 3.5E-122 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VS_0499 d01285c9a06e412882e87ebe108cf8d8 302 Hamap MF_00152 Probable endonuclease 4 [nfo]. 15 292 42.498 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VS_3031 b0704ee7d9e0e83b7766e191598d3bdc 406 Pfam PF07690 Major Facilitator Superfamily 17 340 2.3E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_3031 b0704ee7d9e0e83b7766e191598d3bdc 406 Gene3D G3DSA:1.20.1250.20 208 405 2.4E-11 T 14-10-2018 VS_3031 b0704ee7d9e0e83b7766e191598d3bdc 406 SUPERFAMILY SSF103473 9 399 1.31E-31 T 14-10-2018 IPR036259 MFS transporter superfamily VS_3031 b0704ee7d9e0e83b7766e191598d3bdc 406 Gene3D G3DSA:1.20.1250.20 8 202 2.3E-13 T 14-10-2018 VS_1419 327a85933906349faacc4feef911fec0 868 Gene3D G3DSA:2.60.40.1840 443 544 5.3E-36 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VS_1419 327a85933906349faacc4feef911fec0 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VS_1419 327a85933906349faacc4feef911fec0 868 SUPERFAMILY SSF55486 203 450 1.26E-73 T 14-10-2018 VS_1419 327a85933906349faacc4feef911fec0 868 SUPERFAMILY SSF63737 3 192 4.97E-45 T 14-10-2018 VS_1419 327a85933906349faacc4feef911fec0 868 Gene3D G3DSA:2.60.40.1730 15 193 7.1E-68 T 14-10-2018 VS_1419 327a85933906349faacc4feef911fec0 868 Gene3D G3DSA:1.25.50.10 545 867 4.1E-111 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VS_1419 327a85933906349faacc4feef911fec0 868 Gene3D G3DSA:1.10.390.10 279 442 2.9E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VS_1419 327a85933906349faacc4feef911fec0 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 2.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VS_1419 327a85933906349faacc4feef911fec0 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 2.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VS_1419 327a85933906349faacc4feef911fec0 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 2.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VS_1419 327a85933906349faacc4feef911fec0 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 2.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VS_1419 327a85933906349faacc4feef911fec0 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 2.1E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VS_1419 327a85933906349faacc4feef911fec0 868 Gene3D G3DSA:1.10.1740.60 194 278 6.2E-39 T 14-10-2018 VS_1419 327a85933906349faacc4feef911fec0 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 867 1.0E-110 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VS_1419 327a85933906349faacc4feef911fec0 868 Pfam PF01433 Peptidase family M1 domain 207 435 2.5E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VS_1419 327a85933906349faacc4feef911fec0 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 3.4E-32 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VS_II0205 081b497efaca51fe0801c35569a8a288 273 Gene3D G3DSA:3.40.190.10 99 233 2.3E-81 T 14-10-2018 VS_II0205 081b497efaca51fe0801c35569a8a288 273 Gene3D G3DSA:3.40.190.10 30 270 2.3E-81 T 14-10-2018 VS_II0205 081b497efaca51fe0801c35569a8a288 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 21 271 8.9E-77 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VS_II0205 081b497efaca51fe0801c35569a8a288 273 Pfam PF12849 PBP superfamily domain 20 259 2.1E-40 T 14-10-2018 IPR024370 PBP domain VS_II0205 081b497efaca51fe0801c35569a8a288 273 SUPERFAMILY SSF53850 16 273 8.98E-72 T 14-10-2018 VS_1265 724374f6b5b840eb3aa6ad754c841af8 98 SUPERFAMILY SSF54909 1 96 4.47E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_1265 724374f6b5b840eb3aa6ad754c841af8 98 Gene3D G3DSA:3.30.70.100 1 98 2.1E-35 T 14-10-2018 VS_1265 724374f6b5b840eb3aa6ad754c841af8 98 SMART SM00886 2 98 6.4E-32 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel VS_1265 724374f6b5b840eb3aa6ad754c841af8 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 2.5E-31 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel VS_2208 559fc94118979115f077571119d168df 449 Pfam PF00072 Response regulator receiver domain 5 113 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2208 559fc94118979115f077571119d168df 449 Gene3D G3DSA:3.40.50.300 131 314 1.1E-60 T 14-10-2018 VS_2208 559fc94118979115f077571119d168df 449 SUPERFAMILY SSF52540 144 374 4.71E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2208 559fc94118979115f077571119d168df 449 Gene3D G3DSA:1.10.10.60 380 442 6.9E-10 T 14-10-2018 VS_2208 559fc94118979115f077571119d168df 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_2208 559fc94118979115f077571119d168df 449 SUPERFAMILY SSF52172 2 188 4.41E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_2208 559fc94118979115f077571119d168df 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_2208 559fc94118979115f077571119d168df 449 Gene3D G3DSA:3.40.50.2300 1 128 4.6E-32 T 14-10-2018 VS_2208 559fc94118979115f077571119d168df 449 SMART SM00448 2 114 2.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2208 559fc94118979115f077571119d168df 449 Pfam PF00158 Sigma-54 interaction domain 144 310 1.1E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_2208 559fc94118979115f077571119d168df 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_2208 559fc94118979115f077571119d168df 449 Pfam PF02954 Bacterial regulatory protein, Fis family 398 437 2.9E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_2208 559fc94118979115f077571119d168df 449 SMART SM00382 164 307 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2208 559fc94118979115f077571119d168df 449 SUPERFAMILY SSF46689 357 439 6.72E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2208 559fc94118979115f077571119d168df 449 Gene3D G3DSA:1.10.8.60 315 379 1.5E-19 T 14-10-2018 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Pfam PF03764 Elongation factor G, domain IV 475 593 4.0E-42 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Gene3D G3DSA:3.30.70.870 429 479 3.0E-21 T 14-10-2018 VS_2454 f87bf0be134148d0782c573cd4f93748 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 1.3E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 SUPERFAMILY SSF54980 400 477 5.76E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_2454 f87bf0be134148d0782c573cd4f93748 695 Gene3D G3DSA:3.30.230.10 480 683 2.5E-80 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_2454 f87bf0be134148d0782c573cd4f93748 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 175 2.0E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Gene3D G3DSA:3.40.50.300 1 289 1.7E-101 T 14-10-2018 VS_2454 f87bf0be134148d0782c573cd4f93748 695 SMART SM00838 596 683 2.1E-43 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VS_2454 f87bf0be134148d0782c573cd4f93748 695 Pfam PF03144 Elongation factor Tu domain 2 320 387 2.4E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Gene3D G3DSA:2.40.30.10 290 412 5.4E-41 T 14-10-2018 VS_2454 f87bf0be134148d0782c573cd4f93748 695 SMART SM00889 476 594 1.9E-59 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Pfam PF14492 Elongation Factor G, domain II 400 473 5.1E-29 T 14-10-2018 VS_2454 f87bf0be134148d0782c573cd4f93748 695 SUPERFAMILY SSF54211 475 594 1.52E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2454 f87bf0be134148d0782c573cd4f93748 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_2454 f87bf0be134148d0782c573cd4f93748 695 SUPERFAMILY SSF50447 261 398 6.63E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2454 f87bf0be134148d0782c573cd4f93748 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 688 1.1E-289 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 687 100.416 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Gene3D G3DSA:3.30.70.240 600 670 2.5E-80 T 14-10-2018 VS_2454 f87bf0be134148d0782c573cd4f93748 695 Pfam PF00679 Elongation factor G C-terminus 596 682 2.0E-27 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VS_2454 f87bf0be134148d0782c573cd4f93748 695 SUPERFAMILY SSF54980 599 689 1.01E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_2454 f87bf0be134148d0782c573cd4f93748 695 SUPERFAMILY SSF52540 3 278 5.0E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2945 9478391d3b88eb30346d874ed121bc8e 447 SMART SM00878 336 441 1.4E-61 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 Gene3D G3DSA:3.30.1490.20 131 203 4.9E-155 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 SUPERFAMILY SSF51246 331 444 4.34E-41 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.0E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 SUPERFAMILY SSF52440 1 113 1.65E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_2945 9478391d3b88eb30346d874ed121bc8e 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 7.4E-36 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.2E-240 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 Gene3D G3DSA:3.30.470.20 86 433 4.9E-155 T 14-10-2018 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 SUPERFAMILY SSF56059 83 349 4.04E-71 T 14-10-2018 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.1E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_2945 9478391d3b88eb30346d874ed121bc8e 447 Gene3D G3DSA:3.40.50.20 1 85 1.6E-33 T 14-10-2018 VS_2295 f73f83a23217525d51b2ba45e1f81577 307 SUPERFAMILY SSF54909 10 303 9.65E-91 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_2295 f73f83a23217525d51b2ba45e1f81577 307 Pfam PF04261 Dyp-type peroxidase family 12 300 1.6E-86 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VS_2295 f73f83a23217525d51b2ba45e1f81577 307 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 12 300 4.8E-82 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VS_II0678 7f54618b283ccb9683390e0e9051fa48 255 Pfam PF11932 Protein of unknown function (DUF3450) 8 248 3.6E-87 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VS_II0678 7f54618b283ccb9683390e0e9051fa48 255 PIRSF PIRSF028069 1 255 1.7E-100 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 Gene3D G3DSA:1.10.1060.10 108 239 3.8E-56 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 112 5.8E-30 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 Pfam PF13534 4Fe-4S dicluster domain 149 222 1.6E-10 T 14-10-2018 VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 Gene3D G3DSA:3.10.20.30 1 107 1.9E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 SUPERFAMILY SSF46548 108 236 6.28E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 SUPERFAMILY SSF54292 3 107 3.34E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_2244 0a1cdcefd6b75c43d8799177569f8d33 239 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 231 4.2E-86 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 Gene3D G3DSA:3.30.70.580 70 229 4.7E-49 T 14-10-2018 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 1.3E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 Pfam PF00849 RNA pseudouridylate synthase 68 206 4.7E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 Gene3D G3DSA:3.30.70.1560 130 220 4.7E-49 T 14-10-2018 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 SMART SM00363 3 73 3.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 Pfam PF01479 S4 domain 4 43 7.7E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 Gene3D G3DSA:3.10.290.10 1 58 3.6E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 SUPERFAMILY SSF55120 68 238 4.93E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1962 8f47d0b11519c73e27a919194bf9254e 342 SUPERFAMILY SSF55174 4 96 8.92E-12 T 14-10-2018 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 SUPERFAMILY SSF56821 1 551 8.77E-191 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 Gene3D G3DSA:3.40.50.2030 383 551 2.7E-60 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 Gene3D G3DSA:1.20.1270.20 153 235 6.4E-29 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.143 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 6.5E-161 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 Gene3D G3DSA:1.20.1270.20 1 143 1.9E-34 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 Gene3D G3DSA:3.40.50.2030 237 382 6.6E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 PIRSF PIRSF000076 1 553 8.8E-237 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VS_II0344 f0ca28cf32fc946f9a5540c31a5c0be8 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.1E-225 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VS_2062 0d86f9705c4349c59617322da79f91a2 589 Gene3D G3DSA:3.40.50.300 336 589 2.2E-96 T 14-10-2018 VS_2062 0d86f9705c4349c59617322da79f91a2 589 SUPERFAMILY SSF52540 338 587 1.02E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2062 0d86f9705c4349c59617322da79f91a2 589 Pfam PF00005 ABC transporter 366 516 5.6E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2062 0d86f9705c4349c59617322da79f91a2 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 19 588 5.5E-240 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VS_2062 0d86f9705c4349c59617322da79f91a2 589 SUPERFAMILY SSF90123 21 332 1.44E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_2062 0d86f9705c4349c59617322da79f91a2 589 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2062 0d86f9705c4349c59617322da79f91a2 589 Pfam PF00664 ABC transporter transmembrane region 35 299 1.2E-56 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_2062 0d86f9705c4349c59617322da79f91a2 589 Gene3D G3DSA:1.20.1560.10 2 335 1.6E-81 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_2062 0d86f9705c4349c59617322da79f91a2 589 SMART SM00382 375 562 4.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 SUPERFAMILY SSF53955 298 456 2.92E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 Pfam PF01464 Transglycosylase SLT domain 302 418 1.5E-15 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 Gene3D G3DSA:3.40.190.10 40 271 1.4E-48 T 14-10-2018 VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 Gene3D G3DSA:3.40.190.10 133 237 1.4E-48 T 14-10-2018 VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 267 3.7E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 Gene3D G3DSA:1.10.530.10 296 466 1.1E-34 T 14-10-2018 VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 SUPERFAMILY SSF53850 43 280 9.06E-36 T 14-10-2018 VS_0558 3cd2cfb8f52c7245b0266776a429a233 474 SMART SM00062 44 281 2.9E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II1006 8380954f56c19fc67699600c1e793e3b 897 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Pfam PF07724 AAA domain (Cdc48 subfamily) 631 795 3.8E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 802 877 2.7E-11 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_II1006 8380954f56c19fc67699600c1e793e3b 897 SMART SM00382 213 356 1.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1006 8380954f56c19fc67699600c1e793e3b 897 SMART SM00382 631 770 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1006 8380954f56c19fc67699600c1e793e3b 897 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 14 884 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Gene3D G3DSA:1.10.1780.10 1 159 9.7E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 SUPERFAMILY SSF52540 580 881 1.52E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1006 8380954f56c19fc67699600c1e793e3b 897 SUPERFAMILY SSF81923 19 124 5.69E-11 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 SUPERFAMILY SSF52540 175 509 4.22E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1006 8380954f56c19fc67699600c1e793e3b 897 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 680 698 8.2E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 742 756 8.2E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 727 8.2E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 635 653 8.2E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 SMART SM01086 802 892 2.6E-7 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 348 6.6E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Gene3D G3DSA:3.40.50.300 584 799 3.8E-68 T 14-10-2018 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 665 683 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Gene3D G3DSA:3.40.50.300 359 578 1.3E-48 T 14-10-2018 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Gene3D G3DSA:3.40.50.300 162 357 2.8E-62 T 14-10-2018 VS_II1006 8380954f56c19fc67699600c1e793e3b 897 Gene3D G3DSA:1.10.8.60 802 895 1.5E-11 T 14-10-2018 VS_0681 83a2d292ca1b9fcece521ad4517b2878 269 SUPERFAMILY SSF69572 9 266 1.18E-61 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VS_0681 83a2d292ca1b9fcece521ad4517b2878 269 Pfam PF00899 ThiF family 24 198 9.0E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VS_0681 83a2d292ca1b9fcece521ad4517b2878 269 Gene3D G3DSA:3.40.50.720 6 269 9.9E-109 T 14-10-2018 VS_1538 6ba2eaaab484cf83a96b4ec1dd271167 151 Pfam PF03466 LysR substrate binding domain 4 148 1.4E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1538 6ba2eaaab484cf83a96b4ec1dd271167 151 Gene3D G3DSA:3.40.190.10 3 145 1.6E-30 T 14-10-2018 VS_1538 6ba2eaaab484cf83a96b4ec1dd271167 151 Gene3D G3DSA:3.40.190.10 21 120 1.6E-30 T 14-10-2018 VS_1538 6ba2eaaab484cf83a96b4ec1dd271167 151 SUPERFAMILY SSF53850 4 150 1.47E-23 T 14-10-2018 VS_3042 6622245df2a751cc8059554646573068 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 418 480 1.1E-7 T 14-10-2018 IPR000160 GGDEF domain VS_3042 6622245df2a751cc8059554646573068 828 Gene3D G3DSA:3.20.20.450 595 828 1.5E-59 T 14-10-2018 IPR035919 EAL domain superfamily VS_3042 6622245df2a751cc8059554646573068 828 SMART SM00897 29 218 1.4E-15 T 14-10-2018 IPR013702 FIST domain, N-terminal VS_3042 6622245df2a751cc8059554646573068 828 Pfam PF10442 FIST C domain 221 343 4.8E-11 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VS_3042 6622245df2a751cc8059554646573068 828 SMART SM00052 591 828 7.5E-37 T 14-10-2018 IPR001633 EAL domain VS_3042 6622245df2a751cc8059554646573068 828 Gene3D G3DSA:3.30.70.270 402 577 2.0E-14 T 14-10-2018 VS_3042 6622245df2a751cc8059554646573068 828 SMART SM01204 219 345 4.7E-16 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VS_3042 6622245df2a751cc8059554646573068 828 SMART SM00267 406 580 0.0049 T 14-10-2018 IPR000160 GGDEF domain VS_3042 6622245df2a751cc8059554646573068 828 Pfam PF08495 FIST N domain 32 216 2.5E-24 T 14-10-2018 IPR013702 FIST domain, N-terminal VS_3042 6622245df2a751cc8059554646573068 828 SUPERFAMILY SSF141868 599 825 1.26E-55 T 14-10-2018 IPR035919 EAL domain superfamily VS_3042 6622245df2a751cc8059554646573068 828 Pfam PF00563 EAL domain 599 824 2.4E-56 T 14-10-2018 IPR001633 EAL domain VS_3042 6622245df2a751cc8059554646573068 828 SUPERFAMILY SSF55073 422 575 1.26E-11 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 335 7.7E-14 T 14-10-2018 IPR011659 WD40-like Beta Propeller VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 1.5E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 1.4E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 SUPERFAMILY SSF69304 182 448 1.7E-55 T 14-10-2018 VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 51.558 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 447 2.4E-166 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 SUPERFAMILY SSF52964 29 181 1.96E-40 T 14-10-2018 VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 Pfam PF04052 TolB amino-terminal domain 24 126 1.3E-34 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 Gene3D G3DSA:3.40.50.10070 23 183 5.3E-50 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VS_1116 ad80eb5eeb0070352fd5df1fb67ec1f9 450 Gene3D G3DSA:2.120.10.30 185 450 6.3E-96 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 Gene3D G3DSA:3.50.50.60 9 416 3.8E-168 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 Pfam PF00890 FAD binding domain 9 405 4.4E-117 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 SUPERFAMILY SSF56425 237 356 2.24E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 PIRSF PIRSF000171 1 552 7.1E-49 T 14-10-2018 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 SUPERFAMILY SSF46977 452 551 3.14E-36 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 551 7.0E-29 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 Gene3D G3DSA:3.90.700.10 246 350 3.8E-168 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 SUPERFAMILY SSF51905 5 444 3.95E-72 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 551 6.0E-265 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 Gene3D G3DSA:1.20.58.100 431 547 2.4E-39 T 14-10-2018 VS_2246 b47b986847dd8825f01bd6f3ccf5fbfd 552 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 551 9.1E-232 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_II0991 a03924a2ea49bb499c5b1aa8e52f09a8 1130 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1128 2.6E-175 T 14-10-2018 IPR017731 Type VI secretion system, IcmF VS_II0991 a03924a2ea49bb499c5b1aa8e52f09a8 1130 Pfam PF06761 Intracellular multiplication and human macrophage-killing 490 756 6.2E-45 T 14-10-2018 IPR009612 ImcF-related VS_II0991 a03924a2ea49bb499c5b1aa8e52f09a8 1130 Pfam PF06744 Type VI secretion protein IcmF C-terminal 880 1079 8.4E-45 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VS_II0991 a03924a2ea49bb499c5b1aa8e52f09a8 1130 Pfam PF14331 ImcF-related N-terminal domain 154 408 2.1E-48 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain VS_0726 e50b8ab29d919306ee22631c1472f92b 346 Gene3D G3DSA:2.130.10.10 4 346 7.9E-86 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_0726 e50b8ab29d919306ee22631c1472f92b 346 SUPERFAMILY SSF50974 83 330 2.28E-25 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 VS_0726 e50b8ab29d919306ee22631c1472f92b 346 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 345 7.4E-90 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller VS_0112 cfe77b81be790837fc29c2b1bbd3e484 205 PIRSF PIRSF000005 1 205 2.1E-63 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VS_0112 cfe77b81be790837fc29c2b1bbd3e484 205 Gene3D G3DSA:1.10.760.10 109 205 2.8E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_0112 cfe77b81be790837fc29c2b1bbd3e484 205 Pfam PF00034 Cytochrome c 117 201 3.7E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_0112 cfe77b81be790837fc29c2b1bbd3e484 205 Pfam PF00034 Cytochrome c 25 103 2.9E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_0112 cfe77b81be790837fc29c2b1bbd3e484 205 SUPERFAMILY SSF46626 6 105 3.3E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_0112 cfe77b81be790837fc29c2b1bbd3e484 205 Gene3D G3DSA:1.10.760.10 19 108 7.5E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_0112 cfe77b81be790837fc29c2b1bbd3e484 205 SUPERFAMILY SSF46626 115 203 1.06E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1087 fd22fe777951533d672d6e60daad5a9e 196 Pfam PF04994 TfoX C-terminal domain 115 194 3.4E-31 T 14-10-2018 IPR007077 TfoX, C-terminal VS_1087 fd22fe777951533d672d6e60daad5a9e 196 PIRSF PIRSF028788 1 196 2.2E-50 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VS_1087 fd22fe777951533d672d6e60daad5a9e 196 SUPERFAMILY SSF159894 5 104 1.39E-31 T 14-10-2018 VS_1087 fd22fe777951533d672d6e60daad5a9e 196 Pfam PF04993 TfoX N-terminal domain 12 102 3.0E-30 T 14-10-2018 IPR007076 TfoX, N-terminal VS_1087 fd22fe777951533d672d6e60daad5a9e 196 Gene3D G3DSA:3.30.1460.30 1 105 4.4E-37 T 14-10-2018 VS_1087 fd22fe777951533d672d6e60daad5a9e 196 Gene3D G3DSA:1.10.150.20 114 196 2.8E-23 T 14-10-2018 VS_II0630 44c7da4a18ebe23666ec3bd6d88cd0f5 227 SUPERFAMILY SSF53681 114 221 6.7E-9 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_II0630 44c7da4a18ebe23666ec3bd6d88cd0f5 227 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 217 3.2E-21 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_II0630 44c7da4a18ebe23666ec3bd6d88cd0f5 227 Gene3D G3DSA:3.40.50.1860 3 214 1.4E-38 T 14-10-2018 VS_II0630 44c7da4a18ebe23666ec3bd6d88cd0f5 227 Gene3D G3DSA:3.40.50.1860 100 208 1.4E-38 T 14-10-2018 VS_II0630 44c7da4a18ebe23666ec3bd6d88cd0f5 227 SUPERFAMILY SSF53681 2 110 7.03E-19 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_2240 d0513250d6a025482508c6bd7c429157 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.275 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2240 d0513250d6a025482508c6bd7c429157 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VS_2240 d0513250d6a025482508c6bd7c429157 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 6.8E-41 T 14-10-2018 VS_2240 d0513250d6a025482508c6bd7c429157 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 6.8E-41 T 14-10-2018 VS_2240 d0513250d6a025482508c6bd7c429157 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 6.8E-41 T 14-10-2018 VS_2240 d0513250d6a025482508c6bd7c429157 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 6.8E-41 T 14-10-2018 VS_2240 d0513250d6a025482508c6bd7c429157 290 PIRSF PIRSF001553 1 289 1.1E-133 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2240 d0513250d6a025482508c6bd7c429157 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.3E-145 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2240 d0513250d6a025482508c6bd7c429157 290 Gene3D G3DSA:3.40.50.261 124 288 7.3E-76 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2240 d0513250d6a025482508c6bd7c429157 290 Pfam PF00549 CoA-ligase 151 271 1.1E-22 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2240 d0513250d6a025482508c6bd7c429157 290 SUPERFAMILY SSF51735 1 122 1.21E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2240 d0513250d6a025482508c6bd7c429157 290 Pfam PF02629 CoA binding domain 6 99 6.0E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VS_2240 d0513250d6a025482508c6bd7c429157 290 SUPERFAMILY SSF52210 123 286 1.44E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2240 d0513250d6a025482508c6bd7c429157 290 Gene3D G3DSA:3.40.50.720 1 123 4.4E-51 T 14-10-2018 VS_2240 d0513250d6a025482508c6bd7c429157 290 SMART SM00881 4 100 6.5E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VS_2240 d0513250d6a025482508c6bd7c429157 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VS_1250 b1241123d63f4248db23ee23e89a1988 243 Gene3D G3DSA:1.10.10.10 10 87 7.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1250 b1241123d63f4248db23ee23e89a1988 243 SUPERFAMILY SSF48008 109 231 9.68E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1250 b1241123d63f4248db23ee23e89a1988 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 1.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1250 b1241123d63f4248db23ee23e89a1988 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 1.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1250 b1241123d63f4248db23ee23e89a1988 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 5.9E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1250 b1241123d63f4248db23ee23e89a1988 243 Gene3D G3DSA:1.20.120.530 107 235 7.7E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1250 b1241123d63f4248db23ee23e89a1988 243 SUPERFAMILY SSF46785 13 94 5.65E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1250 b1241123d63f4248db23ee23e89a1988 243 Pfam PF07729 FCD domain 110 228 3.7E-20 T 14-10-2018 IPR011711 GntR, C-terminal VS_1250 b1241123d63f4248db23ee23e89a1988 243 SMART SM00895 109 230 1.4E-14 T 14-10-2018 IPR011711 GntR, C-terminal VS_1250 b1241123d63f4248db23ee23e89a1988 243 SMART SM00345 21 80 4.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_0223 768edc7f514ec66fc69a8db2f240dfdc 432 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 329 430 6.7E-10 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VS_0223 768edc7f514ec66fc69a8db2f240dfdc 432 Pfam PF01943 Polysaccharide biosynthesis protein 10 274 5.5E-10 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VS_0978 b4d8a6c08f0146def51b3cdfd590ecbf 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VS_0978 b4d8a6c08f0146def51b3cdfd590ecbf 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.5E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_0978 b4d8a6c08f0146def51b3cdfd590ecbf 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.348 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VS_0978 b4d8a6c08f0146def51b3cdfd590ecbf 192 PIRSF PIRSF006102 1 192 2.1E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_2366 d47905af85bd7c49739dcccdaa974319 86 SUPERFAMILY SSF143800 1 81 1.29E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2366 d47905af85bd7c49739dcccdaa974319 86 Pfam PF01197 Ribosomal protein L31 1 79 7.1E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2366 d47905af85bd7c49739dcccdaa974319 86 Gene3D G3DSA:2.30.170.50 1 84 1.2E-24 T 14-10-2018 VS_2366 d47905af85bd7c49739dcccdaa974319 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.924 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2366 d47905af85bd7c49739dcccdaa974319 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.7E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2366 d47905af85bd7c49739dcccdaa974319 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2366 d47905af85bd7c49739dcccdaa974319 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.4E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2366 d47905af85bd7c49739dcccdaa974319 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.4E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2366 d47905af85bd7c49739dcccdaa974319 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.4E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_II0595 aefb14fa9347168859aff05d158197b6 45 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 3.3E-26 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VS_II0595 aefb14fa9347168859aff05d158197b6 45 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 6.7E-27 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VS_II0030 edd36ee2f753cbad3f5ea1a2ad8d03f1 274 Gene3D G3DSA:3.40.630.80 15 273 4.6E-87 T 14-10-2018 VS_II0030 edd36ee2f753cbad3f5ea1a2ad8d03f1 274 Pfam PF00583 Acetyltransferase (GNAT) family 178 255 5.3E-8 T 14-10-2018 IPR000182 GNAT domain VS_II0030 edd36ee2f753cbad3f5ea1a2ad8d03f1 274 SUPERFAMILY SSF55729 26 261 2.32E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0030 edd36ee2f753cbad3f5ea1a2ad8d03f1 274 Gene3D G3DSA:3.40.630.30 126 265 4.6E-87 T 14-10-2018 VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 SUPERFAMILY SSF55073 418 577 3.84E-45 T 14-10-2018 IPR029787 Nucleotide cyclase VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 Gene3D G3DSA:3.30.450.20 265 407 2.8E-25 T 14-10-2018 VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 Pfam PF08448 PAS fold 286 396 2.2E-15 T 14-10-2018 IPR013656 PAS fold-4 VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 Pfam PF13188 PAS domain 39 78 0.0023 T 14-10-2018 IPR000014 PAS domain VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 SUPERFAMILY SSF55785 267 393 9.95E-19 T 14-10-2018 IPR035965 PAS domain superfamily VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 277 402 1.2E-13 T 14-10-2018 IPR000014 PAS domain VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 Gene3D G3DSA:3.30.70.270 408 580 2.9E-49 T 14-10-2018 VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 409 577 5.3E-48 T 14-10-2018 IPR000160 GGDEF domain VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 574 8.3E-50 T 14-10-2018 IPR000160 GGDEF domain VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 SMART SM00267 402 578 2.4E-69 T 14-10-2018 IPR000160 GGDEF domain VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 SMART SM00091 280 347 0.17 T 14-10-2018 IPR000014 PAS domain VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 SMART SM00091 158 235 210.0 T 14-10-2018 IPR000014 PAS domain VS_0476 3de3f363ab57bbaa76efbc764a2eeacd 583 SMART SM00091 38 104 3.9 T 14-10-2018 IPR000014 PAS domain VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 SMART SM01086 657 746 1.1E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 SUPERFAMILY SSF81923 1 142 4.84E-59 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 SUPERFAMILY SSF52540 441 744 2.98E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Gene3D G3DSA:3.40.50.300 161 354 1.5E-62 T 14-10-2018 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Gene3D G3DSA:1.10.1780.10 1 143 5.0E-43 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 328 6.6E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 SMART SM00382 491 658 1.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 SMART SM00382 210 355 3.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Gene3D G3DSA:1.10.8.60 355 442 1.4E-34 T 14-10-2018 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 5.2E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 1.2E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Gene3D G3DSA:1.10.8.60 657 756 7.6E-31 T 14-10-2018 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 SUPERFAMILY SSF52540 171 429 5.14E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Gene3D G3DSA:3.40.50.300 443 656 1.4E-75 T 14-10-2018 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.3E-13 T 14-10-2018 IPR004176 Clp, N-terminal VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_1074 76b2e0e8c2b75a7b05589f05f983b37a 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VS_2509 552dec405fca6c99ed8104659cfc3a46 327 SMART SM00382 34 231 2.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2509 552dec405fca6c99ed8104659cfc3a46 327 Gene3D G3DSA:3.40.50.300 3 325 3.6E-90 T 14-10-2018 VS_2509 552dec405fca6c99ed8104659cfc3a46 327 Pfam PF00005 ABC transporter 26 181 1.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2509 552dec405fca6c99ed8104659cfc3a46 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 9.9E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_2509 552dec405fca6c99ed8104659cfc3a46 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2509 552dec405fca6c99ed8104659cfc3a46 327 SUPERFAMILY SSF52540 5 252 4.76E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2509 552dec405fca6c99ed8104659cfc3a46 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 1.4E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_II1504 53e16fc8560bbf652f5d0b58f319712e 238 Pfam PF01709 Transcriptional regulator 5 236 2.9E-69 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II1504 53e16fc8560bbf652f5d0b58f319712e 238 SUPERFAMILY SSF75625 1 237 1.31E-71 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II1504 53e16fc8560bbf652f5d0b58f319712e 238 Gene3D G3DSA:1.10.10.200 17 78 1.9E-15 T 14-10-2018 IPR017856 Integrase-like, N-terminal VS_II1504 53e16fc8560bbf652f5d0b58f319712e 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.527 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II1504 53e16fc8560bbf652f5d0b58f319712e 238 Gene3D G3DSA:3.30.70.980 83 235 1.4E-43 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II1504 53e16fc8560bbf652f5d0b58f319712e 238 Gene3D G3DSA:3.30.70.980 131 202 1.4E-43 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0167 f2a0b2431f252757841ae1bf9a8935b0 588 SUPERFAMILY SSF51445 4 484 6.21E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0167 f2a0b2431f252757841ae1bf9a8935b0 588 SMART SM00642 10 457 1.9E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0167 f2a0b2431f252757841ae1bf9a8935b0 588 Gene3D G3DSA:3.20.20.80 1 189 1.8E-23 T 14-10-2018 VS_II0167 f2a0b2431f252757841ae1bf9a8935b0 588 Gene3D G3DSA:3.20.20.80 228 464 2.2E-41 T 14-10-2018 VS_II0167 f2a0b2431f252757841ae1bf9a8935b0 588 Pfam PF00128 Alpha amylase, catalytic domain 48 145 3.6E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0167 f2a0b2431f252757841ae1bf9a8935b0 588 Pfam PF00128 Alpha amylase, catalytic domain 272 427 9.3E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_2681 abd11e7f4147f006733bba535e911109 372 Pfam PF00437 Type II/IV secretion system protein 15 272 9.5E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_2681 abd11e7f4147f006733bba535e911109 372 Gene3D G3DSA:3.30.450.90 1 100 9.8E-24 T 14-10-2018 VS_2681 abd11e7f4147f006733bba535e911109 372 Gene3D G3DSA:3.40.50.300 102 359 3.4E-87 T 14-10-2018 VS_2681 abd11e7f4147f006733bba535e911109 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 344 4.8E-127 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VS_2681 abd11e7f4147f006733bba535e911109 372 SUPERFAMILY SSF52540 6 336 1.66E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0101 f1060f26548ee5c17c305c35e28b40cf 293 Gene3D G3DSA:3.40.190.10 92 287 1.3E-60 T 14-10-2018 VS_II0101 f1060f26548ee5c17c305c35e28b40cf 293 SUPERFAMILY SSF46785 6 86 1.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0101 f1060f26548ee5c17c305c35e28b40cf 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.7E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0101 f1060f26548ee5c17c305c35e28b40cf 293 SUPERFAMILY SSF53850 91 291 2.02E-40 T 14-10-2018 VS_II0101 f1060f26548ee5c17c305c35e28b40cf 293 Gene3D G3DSA:3.40.190.10 164 262 1.3E-60 T 14-10-2018 VS_II0101 f1060f26548ee5c17c305c35e28b40cf 293 Pfam PF03466 LysR substrate binding domain 90 291 8.9E-41 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0101 f1060f26548ee5c17c305c35e28b40cf 293 Gene3D G3DSA:1.10.10.10 4 89 5.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0477 0efb62f21783a92f9906d38c26be25ce 376 SUPERFAMILY SSF48452 58 213 3.79E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0477 0efb62f21783a92f9906d38c26be25ce 376 Gene3D G3DSA:1.25.40.10 38 237 4.4E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 Gene3D G3DSA:4.10.520.10 2 39 1.2E-11 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 Gene3D G3DSA:4.10.520.10 40 91 9.4E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 9.4E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 5.0E-49 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 SMART SM00411 1 91 5.8E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.877 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VS_2056 8c0c7e98a2effa6db6349d9b93f1b266 94 SUPERFAMILY SSF47729 1 91 2.94E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_1018 66157cd7028872ac0fa488acd1063571 193 Pfam PF02545 Maf-like protein 5 186 2.4E-45 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_1018 66157cd7028872ac0fa488acd1063571 193 SUPERFAMILY SSF52972 2 186 9.81E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_1018 66157cd7028872ac0fa488acd1063571 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.252 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_1018 66157cd7028872ac0fa488acd1063571 193 PIRSF PIRSF006305 1 192 5.0E-48 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_1018 66157cd7028872ac0fa488acd1063571 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 3.9E-51 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_1018 66157cd7028872ac0fa488acd1063571 193 Gene3D G3DSA:3.90.950.10 5 193 5.8E-60 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 Gene3D G3DSA:3.40.190.10 90 298 6.7E-25 T 14-10-2018 VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 Gene3D G3DSA:1.10.10.10 1 88 3.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 SUPERFAMILY SSF53850 90 298 1.55E-22 T 14-10-2018 VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 Gene3D G3DSA:3.40.190.10 171 273 6.7E-25 T 14-10-2018 VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 Pfam PF03466 LysR substrate binding domain 94 300 5.1E-16 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0259 bc83d3614e03b8e166f6ff60d1fddd29 308 SUPERFAMILY SSF46785 3 83 8.71E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 SUPERFAMILY SSF56542 34 419 4.58E-77 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 Gene3D G3DSA:3.30.70.420 156 271 4.1E-108 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 122 142 7.2E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 211 229 7.2E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 354 375 7.2E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 252 277 7.2E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 91 112 7.2E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 301 327 7.2E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 366 373 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 Gene3D G3DSA:3.90.770.10 102 415 4.1E-108 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 SUPERFAMILY SSF55035 156 271 4.71E-36 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_II0457 0a3b3b4f2712ef0d9586879c22a31ab1 429 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 62 429 3.4E-111 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VS_2382 17af67cec0cae095788b271a8772a8e4 344 SUPERFAMILY SSF55021 248 343 3.43E-25 T 14-10-2018 VS_2382 17af67cec0cae095788b271a8772a8e4 344 Pfam PF00005 ABC transporter 23 169 8.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2382 17af67cec0cae095788b271a8772a8e4 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 8.8E-198 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VS_2382 17af67cec0cae095788b271a8772a8e4 344 SUPERFAMILY SSF52540 1 239 4.51E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2382 17af67cec0cae095788b271a8772a8e4 344 Gene3D G3DSA:3.40.50.300 1 232 1.5E-74 T 14-10-2018 VS_2382 17af67cec0cae095788b271a8772a8e4 344 SMART SM00930 265 340 2.2E-27 T 14-10-2018 IPR018449 NIL domain VS_2382 17af67cec0cae095788b271a8772a8e4 344 Gene3D G3DSA:3.30.70.260 233 343 5.9E-39 T 14-10-2018 VS_2382 17af67cec0cae095788b271a8772a8e4 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2382 17af67cec0cae095788b271a8772a8e4 344 SMART SM00382 30 235 5.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2382 17af67cec0cae095788b271a8772a8e4 344 Pfam PF09383 NIL domain 268 339 1.0E-20 T 14-10-2018 IPR018449 NIL domain VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 Gene3D G3DSA:2.40.50.100 57 124 4.5E-15 T 14-10-2018 VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 SUPERFAMILY SSF111369 129 186 2.35E-6 T 14-10-2018 VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 350 9.2E-9 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 Gene3D G3DSA:2.40.30.170 241 353 1.5E-37 T 14-10-2018 VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 300 7.4E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 SUPERFAMILY SSF111369 57 142 2.88E-13 T 14-10-2018 VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 Gene3D G3DSA:1.10.287.470 125 192 4.5E-7 T 14-10-2018 VS_II0849 e04144cb8489da261f3d21563b55e9ad 354 SUPERFAMILY SSF111369 195 298 1.03E-14 T 14-10-2018 VS_0167 bd0305981a3f42f5a1049cba4bfc532a 269 SUPERFAMILY SSF75445 173 244 3.14E-21 T 14-10-2018 VS_0167 bd0305981a3f42f5a1049cba4bfc532a 269 Gene3D G3DSA:3.30.70.260 171 242 2.7E-63 T 14-10-2018 VS_0167 bd0305981a3f42f5a1049cba4bfc532a 269 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 54 259 1.2E-51 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VS_0167 bd0305981a3f42f5a1049cba4bfc532a 269 SUPERFAMILY SSF100950 48 190 1.36E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_0167 bd0305981a3f42f5a1049cba4bfc532a 269 Gene3D G3DSA:3.40.50.1360 51 259 2.7E-63 T 14-10-2018 VS_0167 bd0305981a3f42f5a1049cba4bfc532a 269 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 95 258 1.1E-45 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VS_0514 5cdd95a99e9fc71be5435cabb7637cd7 578 Gene3D G3DSA:3.10.310.30 325 451 1.1E-30 T 14-10-2018 VS_0514 5cdd95a99e9fc71be5435cabb7637cd7 578 Gene3D G3DSA:3.90.1640.30 45 323 2.9E-89 T 14-10-2018 VS_0514 5cdd95a99e9fc71be5435cabb7637cd7 578 Pfam PF02272 DHHA1 domain 319 449 7.7E-26 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VS_0514 5cdd95a99e9fc71be5435cabb7637cd7 578 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 574 3.3E-157 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VS_0514 5cdd95a99e9fc71be5435cabb7637cd7 578 SUPERFAMILY SSF64182 45 462 4.45E-117 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VS_0514 5cdd95a99e9fc71be5435cabb7637cd7 578 Pfam PF01368 DHH family 71 198 1.4E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VS_0514 5cdd95a99e9fc71be5435cabb7637cd7 578 Gene3D G3DSA:2.40.50.460 452 578 1.0E-8 T 14-10-2018 VS_II0770 14b6751da2f0749d4d745d983d5995dd 141 Gene3D G3DSA:3.10.129.10 1 141 9.6E-56 T 14-10-2018 VS_II0770 14b6751da2f0749d4d745d983d5995dd 141 Pfam PF03061 Thioesterase superfamily 52 128 1.2E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VS_II0770 14b6751da2f0749d4d745d983d5995dd 141 SUPERFAMILY SSF54637 1 139 1.61E-30 T 14-10-2018 IPR029069 HotDog domain superfamily VS_II0770 14b6751da2f0749d4d745d983d5995dd 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 4.6E-38 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 Gene3D G3DSA:3.30.450.20 82 188 1.0E-21 T 14-10-2018 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 Pfam PF00158 Sigma-54 interaction domain 206 370 1.9E-55 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 SUPERFAMILY SSF52540 205 445 8.42E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 SUPERFAMILY SSF55785 82 159 3.32E-10 T 14-10-2018 IPR035965 PAS domain superfamily VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 Gene3D G3DSA:1.10.8.60 375 453 5.1E-17 T 14-10-2018 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 Gene3D G3DSA:1.10.10.60 458 513 1.5E-25 T 14-10-2018 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 SMART SM00091 80 146 2.0E-7 T 14-10-2018 IPR000014 PAS domain VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 Pfam PF00989 PAS fold 84 130 2.0E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 1.4E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 Gene3D G3DSA:3.40.50.300 195 374 9.3E-56 T 14-10-2018 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 SUPERFAMILY SSF46689 459 512 3.82E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 SMART SM00382 225 368 4.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 Gene3D G3DSA:3.30.70.260 1 80 5.7E-26 T 14-10-2018 VS_1793 3224a9933731ba8fbf1fe2fcb975362e 514 SUPERFAMILY SSF55021 1 68 4.51E-6 T 14-10-2018 VS_2900 e1da74ada10630cbf4cc27a63b9b8f6a 183 SUPERFAMILY SSF110997 108 179 4.84E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_2900 e1da74ada10630cbf4cc27a63b9b8f6a 183 Pfam PF05036 Sporulation related domain 109 178 2.0E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VS_2900 e1da74ada10630cbf4cc27a63b9b8f6a 183 Gene3D G3DSA:3.30.70.1070 102 181 7.4E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_2798 d588349cdfd4a87d3b4ef8219212c7e9 188 SUPERFAMILY SSF51206 16 136 6.02E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_2798 d588349cdfd4a87d3b4ef8219212c7e9 188 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 4.3E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_2798 d588349cdfd4a87d3b4ef8219212c7e9 188 Gene3D G3DSA:2.60.120.10 1 139 6.8E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_2798 d588349cdfd4a87d3b4ef8219212c7e9 188 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 37 53 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VS_II1062 79fc32b2156789fb29b830bafb94503c 918 SUPERFAMILY SSF55486 211 385 2.01E-19 T 14-10-2018 VS_II1062 79fc32b2156789fb29b830bafb94503c 918 SUPERFAMILY SSF49299 756 838 6.41E-20 T 14-10-2018 IPR035986 PKD domain superfamily VS_II1062 79fc32b2156789fb29b830bafb94503c 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 141 434 2.6E-80 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VS_II1062 79fc32b2156789fb29b830bafb94503c 918 Pfam PF00801 PKD domain 844 910 1.7E-7 T 14-10-2018 IPR000601 PKD domain VS_II1062 79fc32b2156789fb29b830bafb94503c 918 Pfam PF00801 PKD domain 779 826 1.7E-9 T 14-10-2018 IPR000601 PKD domain VS_II1062 79fc32b2156789fb29b830bafb94503c 918 SUPERFAMILY SSF49299 838 916 1.09E-9 T 14-10-2018 IPR035986 PKD domain superfamily VS_II1062 79fc32b2156789fb29b830bafb94503c 918 Pfam PF05547 Immune inhibitor A peptidase M6 105 747 1.1E-274 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VS_II1062 79fc32b2156789fb29b830bafb94503c 918 PIRSF PIRSF007519 1 758 0.0 T 14-10-2018 IPR012300 Peptidase M6, InhA VS_II1062 79fc32b2156789fb29b830bafb94503c 918 Gene3D G3DSA:2.60.40.10 838 918 2.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II1062 79fc32b2156789fb29b830bafb94503c 918 Gene3D G3DSA:2.60.40.10 753 837 5.5E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II1062 79fc32b2156789fb29b830bafb94503c 918 SMART SM00089 752 838 9.2E-17 T 14-10-2018 IPR022409 PKD/Chitinase domain VS_II1062 79fc32b2156789fb29b830bafb94503c 918 SMART SM00089 841 917 1.9E-9 T 14-10-2018 IPR022409 PKD/Chitinase domain VS_II0348 dadd19e38772a2b4902481a860c0d922 537 Pfam PF00072 Response regulator receiver domain 416 529 1.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 SUPERFAMILY SSF55874 98 268 3.01E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0348 dadd19e38772a2b4902481a860c0d922 537 Gene3D G3DSA:1.10.287.130 9 107 8.9E-28 T 14-10-2018 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 SMART SM00387 156 272 1.9E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0348 dadd19e38772a2b4902481a860c0d922 537 SUPERFAMILY SSF52172 413 532 1.42E-38 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0348 dadd19e38772a2b4902481a860c0d922 537 Gene3D G3DSA:3.30.565.10 108 275 2.4E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0348 dadd19e38772a2b4902481a860c0d922 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 44 109 2.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 SMART SM00388 44 109 2.8E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 157 268 8.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0348 dadd19e38772a2b4902481a860c0d922 537 SUPERFAMILY SSF47384 30 110 2.35E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 Gene3D G3DSA:3.40.50.2300 410 535 1.9E-40 T 14-10-2018 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 SMART SM00448 414 531 8.7E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 232 250 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 215 225 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 197 211 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0348 dadd19e38772a2b4902481a860c0d922 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 256 269 3.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 Gene3D G3DSA:3.30.540.10 1 140 1.7E-48 T 14-10-2018 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 Pfam PF00459 Inositol monophosphatase family 2 260 7.7E-66 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 Gene3D G3DSA:3.40.190.80 142 267 1.3E-35 T 14-10-2018 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 4.9E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 4.9E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 4.9E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.9E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 4.9E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.9E-55 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VS_0604 a904f8fb670ae15994a4a373c85293d2 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VS_0604 a904f8fb670ae15994a4a373c85293d2 267 SUPERFAMILY SSF56655 1 260 1.83E-80 T 14-10-2018 VS_II0244 5464628586052c347235b806d1509809 378 Gene3D G3DSA:2.40.370.10 256 378 5.6E-31 T 14-10-2018 IPR023374 AttH-like domain superfamily VS_II0244 5464628586052c347235b806d1509809 378 Gene3D G3DSA:2.40.370.10 64 254 4.3E-64 T 14-10-2018 IPR023374 AttH-like domain superfamily VS_II0244 5464628586052c347235b806d1509809 378 Pfam PF07143 CrtC N-terminal lipocalin domain 76 251 8.0E-54 T 14-10-2018 IPR010791 AttH domain VS_II0244 5464628586052c347235b806d1509809 378 SUPERFAMILY SSF159245 53 378 2.88E-101 T 14-10-2018 VS_II0244 5464628586052c347235b806d1509809 378 Pfam PF17186 Lipocalin-like domain 256 378 2.1E-40 T 14-10-2018 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 8.9E-172 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 Gene3D G3DSA:3.30.470.20 1 234 4.4E-90 T 14-10-2018 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 Gene3D G3DSA:3.40.50.261 240 388 1.1E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 SUPERFAMILY SSF52210 239 385 3.53E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 Gene3D G3DSA:3.30.1490.20 21 104 4.4E-90 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 PIRSF PIRSF001554 1 388 5.4E-152 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 SUPERFAMILY SSF56059 1 238 2.16E-78 T 14-10-2018 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 Pfam PF00549 CoA-ligase 262 382 2.2E-24 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.839 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2241 ab4bc6bc1bcb34db1a832c50560081ba 388 Pfam PF08442 ATP-grasp domain 2 203 3.8E-78 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_0883 1cbc6e548bf9b30d4e8980ab5359a166 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.59 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VS_0883 1cbc6e548bf9b30d4e8980ab5359a166 220 Gene3D G3DSA:3.30.750.120 1 112 5.2E-34 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VS_0883 1cbc6e548bf9b30d4e8980ab5359a166 220 SUPERFAMILY SSF63848 113 216 4.84E-29 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VS_0883 1cbc6e548bf9b30d4e8980ab5359a166 220 Gene3D G3DSA:2.160.20.70 113 219 1.9E-29 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VS_0883 1cbc6e548bf9b30d4e8980ab5359a166 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.6E-30 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VS_0883 1cbc6e548bf9b30d4e8980ab5359a166 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 216 3.9E-75 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VS_0883 1cbc6e548bf9b30d4e8980ab5359a166 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 1.9E-30 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Pfam PF01612 3'-5' exonuclease 334 520 8.8E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VS_0108 f0f34013bb18f93024c710b9c582b360 933 TIGRFAM TIGR00593 pola: DNA polymerase I 9 933 6.2E-286 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Gene3D G3DSA:1.20.1060.10 547 662 1.5E-42 T 14-10-2018 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 849 865 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 697 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 727 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 747 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 758 783 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 817 828 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 806 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 681 2.7E-77 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Gene3D G3DSA:1.10.150.20 713 856 2.7E-113 T 14-10-2018 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Gene3D G3DSA:3.30.420.10 331 546 1.2E-67 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_0108 f0f34013bb18f93024c710b9c582b360 933 ProSitePatterns PS00447 DNA polymerase family A signature. 758 777 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 SMART SM00474 334 521 5.0E-41 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Gene3D G3DSA:3.40.50.1010 9 283 1.8E-94 T 14-10-2018 VS_0108 f0f34013bb18f93024c710b9c582b360 933 SUPERFAMILY SSF56672 527 933 1.11E-157 T 14-10-2018 VS_0108 f0f34013bb18f93024c710b9c582b360 933 SUPERFAMILY SSF47807 171 291 5.23E-30 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VS_0108 f0f34013bb18f93024c710b9c582b360 933 SMART SM00279 173 208 1.2E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.5E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Gene3D G3DSA:3.30.70.370 668 929 2.7E-113 T 14-10-2018 VS_0108 f0f34013bb18f93024c710b9c582b360 933 SMART SM00475 7 267 1.6E-124 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VS_0108 f0f34013bb18f93024c710b9c582b360 933 SMART SM00482 690 897 2.4E-114 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 270 1.0E-28 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VS_0108 f0f34013bb18f93024c710b9c582b360 933 Pfam PF00476 DNA polymerase family A 557 930 2.0E-156 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0108 f0f34013bb18f93024c710b9c582b360 933 SUPERFAMILY SSF88723 7 170 8.83E-58 T 14-10-2018 IPR029060 PIN-like domain superfamily VS_0108 f0f34013bb18f93024c710b9c582b360 933 Gene3D G3DSA:1.10.150.20 174 253 1.8E-94 T 14-10-2018 VS_0108 f0f34013bb18f93024c710b9c582b360 933 SUPERFAMILY SSF53098 337 522 1.33E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 SUPERFAMILY SSF55021 630 705 3.82E-9 T 14-10-2018 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Pfam PF02824 TGS domain 391 449 6.3E-18 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 3.2E-33 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 SUPERFAMILY SSF81301 180 395 1.8E-58 T 14-10-2018 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Gene3D G3DSA:1.10.3210.10 3 190 8.2E-79 T 14-10-2018 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 SUPERFAMILY SSF109604 3 190 5.02E-74 T 14-10-2018 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 SMART SM00471 41 153 4.2E-10 T 14-10-2018 IPR003607 HD/PDEase domain VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Pfam PF13328 HD domain 28 175 7.7E-53 T 14-10-2018 IPR003607 HD/PDEase domain VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Gene3D G3DSA:3.30.70.260 629 708 3.7E-14 T 14-10-2018 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 SMART SM00954 235 345 1.4E-57 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Gene3D G3DSA:3.10.20.30 384 458 4.7E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 705 1.7E-267 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Gene3D G3DSA:3.30.460.10 193 325 1.0E-45 T 14-10-2018 VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 Pfam PF13291 ACT domain 628 705 2.2E-15 T 14-10-2018 IPR002912 ACT domain VS_0159 fbfa0a941920e106fbe8420af4b141bc 708 SUPERFAMILY SSF81271 378 450 1.94E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 9.4E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 9.4E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 9.4E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 Pfam PF00467 KOW motif 131 160 2.4E-7 T 14-10-2018 IPR005824 KOW VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 SUPERFAMILY SSF50104 125 181 7.52E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 8.7E-71 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 SUPERFAMILY SSF82679 6 116 2.22E-39 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 Gene3D G3DSA:3.30.70.940 1 122 2.6E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 SMART SM00739 127 154 3.2E-5 T 14-10-2018 IPR005824 KOW VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 SMART SM00738 6 115 2.5E-49 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.73 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 Pfam PF02357 Transcription termination factor nusG 7 112 4.7E-26 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_2970 e1e1d6841d9e893561628e72bf6851d6 182 Gene3D G3DSA:2.30.30.30 123 181 4.7E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VS_1162 50a27072cd5da9e1886b72433de665d1 216 Pfam PF00005 ABC transporter 21 163 2.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1162 50a27072cd5da9e1886b72433de665d1 216 SMART SM00382 28 212 2.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1162 50a27072cd5da9e1886b72433de665d1 216 Gene3D G3DSA:3.40.50.300 1 206 5.2E-51 T 14-10-2018 VS_1162 50a27072cd5da9e1886b72433de665d1 216 SUPERFAMILY SSF52540 4 201 1.54E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2528 9abe3369f67d34204a67e1f5b40caea1 148 SUPERFAMILY SSF109635 7 107 9.94E-37 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily VS_2528 9abe3369f67d34204a67e1f5b40caea1 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 3.9E-51 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VS_2528 9abe3369f67d34204a67e1f5b40caea1 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VS_2528 9abe3369f67d34204a67e1f5b40caea1 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 30.0 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VS_2528 9abe3369f67d34204a67e1f5b40caea1 148 Gene3D G3DSA:1.20.120.910 17 147 2.6E-35 T 14-10-2018 VS_2528 9abe3369f67d34204a67e1f5b40caea1 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 5.3E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VS_2528 9abe3369f67d34204a67e1f5b40caea1 148 SUPERFAMILY SSF57716 108 146 1.57E-9 T 14-10-2018 VS_0750 3f1194105ee4bc142fa3ec0dfdeb8478 215 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 5 213 24.829 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VS_0750 3f1194105ee4bc142fa3ec0dfdeb8478 215 Gene3D G3DSA:2.50.20.10 24 214 1.0E-48 T 14-10-2018 VS_0750 3f1194105ee4bc142fa3ec0dfdeb8478 215 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 211 5.6E-32 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VS_0750 3f1194105ee4bc142fa3ec0dfdeb8478 215 Pfam PF03550 Outer membrane lipoprotein LolB 44 211 3.0E-43 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VS_0750 3f1194105ee4bc142fa3ec0dfdeb8478 215 SUPERFAMILY SSF89392 19 213 1.18E-42 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VS_II1399 22f160d138378bde0e81036b89c1be24 951 Gene3D G3DSA:3.30.465.40 14 208 1.8E-25 T 14-10-2018 VS_II1399 22f160d138378bde0e81036b89c1be24 951 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 552 563 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_II1399 22f160d138378bde0e81036b89c1be24 951 Pfam PF01565 FAD binding domain 53 189 2.7E-29 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VS_II1399 22f160d138378bde0e81036b89c1be24 951 Pfam PF02754 Cysteine-rich domain 722 793 0.0014 T 14-10-2018 IPR004017 Cysteine-rich domain VS_II1399 22f160d138378bde0e81036b89c1be24 951 SUPERFAMILY SSF46548 505 633 4.71E-22 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_II1399 22f160d138378bde0e81036b89c1be24 951 Gene3D G3DSA:1.10.1060.10 526 644 2.0E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_II1399 22f160d138378bde0e81036b89c1be24 951 Pfam PF13183 4Fe-4S dicluster domain 550 622 2.0E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_II1399 22f160d138378bde0e81036b89c1be24 951 SUPERFAMILY SSF55103 281 534 1.18E-56 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VS_II1399 22f160d138378bde0e81036b89c1be24 951 Gene3D G3DSA:3.30.70.2190 279 395 2.6E-6 T 14-10-2018 VS_II1399 22f160d138378bde0e81036b89c1be24 951 SUPERFAMILY SSF56176 17 274 2.94E-57 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VS_II1399 22f160d138378bde0e81036b89c1be24 951 Gene3D G3DSA:3.30.70.2740 404 487 2.4E-7 T 14-10-2018 VS_II1399 22f160d138378bde0e81036b89c1be24 951 Pfam PF02913 FAD linked oxidases, C-terminal domain 280 526 8.8E-60 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VS_II1399 22f160d138378bde0e81036b89c1be24 951 Gene3D G3DSA:1.10.45.10 490 525 5.4E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 VS_II1312 8fa6955032e530348a107d668db7ca8c 667 SMART SM00304 337 390 2.9E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1312 8fa6955032e530348a107d668db7ca8c 667 SMART SM00283 405 666 5.1E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1312 8fa6955032e530348a107d668db7ca8c 667 Gene3D G3DSA:1.10.287.950 337 667 7.0E-69 T 14-10-2018 VS_II1312 8fa6955032e530348a107d668db7ca8c 667 Pfam PF08376 Nitrate and nitrite sensing 64 299 3.6E-51 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein VS_II1312 8fa6955032e530348a107d668db7ca8c 667 SUPERFAMILY SSF58104 358 666 5.1E-74 T 14-10-2018 VS_II1312 8fa6955032e530348a107d668db7ca8c 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 632 6.6E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.0E-126 T 14-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.6E-58 T 14-10-2018 VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0015 T 14-10-2018 VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 SUPERFAMILY SSF51735 3 240 1.7E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 Gene3D G3DSA:3.40.50.720 3 241 2.2E-72 T 14-10-2018 VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0771 d4f5da9065c93edcb9a9ec775f6061e5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_2833 db58f312c1e376bcceec38453d31daa0 108 SUPERFAMILY SSF54999 10 106 1.7E-34 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VS_2833 db58f312c1e376bcceec38453d31daa0 108 PRINTS PR00971 Ribosomal protein S10 family signature 66 80 1.5E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2833 db58f312c1e376bcceec38453d31daa0 108 PRINTS PR00971 Ribosomal protein S10 family signature 10 23 1.5E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2833 db58f312c1e376bcceec38453d31daa0 108 PRINTS PR00971 Ribosomal protein S10 family signature 45 60 1.5E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2833 db58f312c1e376bcceec38453d31daa0 108 Gene3D G3DSA:3.30.70.600 6 108 5.5E-36 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VS_2833 db58f312c1e376bcceec38453d31daa0 108 ProSitePatterns PS00361 Ribosomal protein S10 signature. 34 49 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2833 db58f312c1e376bcceec38453d31daa0 108 Pfam PF00338 Ribosomal protein S10p/S20e 12 105 3.4E-33 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VS_2833 db58f312c1e376bcceec38453d31daa0 108 SMART SM01403 12 108 3.2E-51 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VS_2833 db58f312c1e376bcceec38453d31daa0 108 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 8 107 26.245 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2833 db58f312c1e376bcceec38453d31daa0 108 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 9 106 2.3E-43 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2104 5a022a71c5b6feaa551e84a5f3be3b6d 387 Pfam PF13533 Biotin-lipoyl like 96 137 1.0E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_2104 5a022a71c5b6feaa551e84a5f3be3b6d 387 SUPERFAMILY SSF111369 78 295 6.93E-18 T 14-10-2018 VS_2104 5a022a71c5b6feaa551e84a5f3be3b6d 387 Gene3D G3DSA:2.40.30.170 75 307 3.8E-47 T 14-10-2018 VS_2104 5a022a71c5b6feaa551e84a5f3be3b6d 387 Gene3D G3DSA:2.40.50.100 89 235 3.8E-47 T 14-10-2018 VS_2104 5a022a71c5b6feaa551e84a5f3be3b6d 387 Gene3D G3DSA:1.10.287.470 123 193 3.8E-47 T 14-10-2018 VS_2104 5a022a71c5b6feaa551e84a5f3be3b6d 387 Gene3D G3DSA:2.40.420.20 73 379 3.8E-47 T 14-10-2018 VS_2104 5a022a71c5b6feaa551e84a5f3be3b6d 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 72 382 2.0E-53 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II0296 4a342139651750a2ef84bb6383136b34 623 Pfam PF02743 Cache domain 33 254 2.8E-31 T 14-10-2018 IPR033479 Double Cache domain 1 VS_II0296 4a342139651750a2ef84bb6383136b34 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 589 5.5E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0296 4a342139651750a2ef84bb6383136b34 623 SMART SM00283 361 622 1.3E-75 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0296 4a342139651750a2ef84bb6383136b34 623 Gene3D G3DSA:3.30.450.20 62 173 6.6E-71 T 14-10-2018 VS_II0296 4a342139651750a2ef84bb6383136b34 623 SMART SM00304 292 346 4.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0296 4a342139651750a2ef84bb6383136b34 623 SMART SM00304 374 441 53.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0296 4a342139651750a2ef84bb6383136b34 623 Pfam PF00672 HAMP domain 292 342 2.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0296 4a342139651750a2ef84bb6383136b34 623 SUPERFAMILY SSF58104 314 623 5.49E-76 T 14-10-2018 VS_II0296 4a342139651750a2ef84bb6383136b34 623 Gene3D G3DSA:3.30.450.20 49 266 6.6E-71 T 14-10-2018 VS_II0296 4a342139651750a2ef84bb6383136b34 623 Gene3D G3DSA:1.10.287.950 292 623 3.7E-68 T 14-10-2018 VS_II0296 4a342139651750a2ef84bb6383136b34 623 SUPERFAMILY SSF103190 49 184 4.71E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_1071 c18435b0b5cbc272c6e342d953859e78 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VS_1071 c18435b0b5cbc272c6e342d953859e78 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VS_1071 c18435b0b5cbc272c6e342d953859e78 741 SUPERFAMILY SSF53659 5 740 0.0 T 14-10-2018 VS_1071 c18435b0b5cbc272c6e342d953859e78 741 Gene3D G3DSA:3.40.718.10 409 650 5.1E-9 T 14-10-2018 VS_1071 c18435b0b5cbc272c6e342d953859e78 741 PIRSF PIRSF009407 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 SMART SM00433 35 798 1.0E-273 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 3.6E-84 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Gene3D G3DSA:3.40.50.670 703 804 1.1E-26 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Gene3D G3DSA:3.30.230.10 221 393 3.7E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 SMART SM00387 31 175 4.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 SUPERFAMILY SSF54211 221 393 1.1E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 107.669 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 SUPERFAMILY SSF55874 4 212 5.76E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Gene3D G3DSA:3.10.20.690 593 684 3.3E-34 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 4.0E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 3.7E-70 T 14-10-2018 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 1.7E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Gene3D G3DSA:3.40.50.670 399 571 9.9E-76 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 SUPERFAMILY SSF56719 395 796 3.14E-88 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Pfam PF01751 Toprim domain 420 532 1.1E-18 T 14-10-2018 IPR006171 TOPRIM domain VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Pfam PF00204 DNA gyrase B 221 391 1.2E-59 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0013 fc1ed8d9df79e1888d15a018c39bb8a9 805 Gene3D G3DSA:3.30.565.10 1 220 3.8E-94 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 194 1.6E-12 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 Gene3D G3DSA:3.40.50.720 119 239 1.3E-81 T 14-10-2018 VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.8E-22 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 31.648 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 SUPERFAMILY SSF53223 6 105 1.09E-29 T 14-10-2018 VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 Gene3D G3DSA:3.40.50.10860 8 258 1.3E-81 T 14-10-2018 VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 SUPERFAMILY SSF51735 106 273 4.89E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_3117 1c4033e8600e97fa97dcbb43d965e5c1 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 1.9E-83 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 SUPERFAMILY SSF52540 78 349 8.82E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0914 7d0e1230912004a749b633d977c04f9c 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 2.9E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 SUPERFAMILY SSF50615 1 76 4.19E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 Gene3D G3DSA:2.40.10.170 1 76 8.3E-28 T 14-10-2018 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 SMART SM00382 143 328 6.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0914 7d0e1230912004a749b633d977c04f9c 461 Gene3D G3DSA:3.40.50.300 77 345 4.4E-111 T 14-10-2018 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 2.8E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 1.8E-249 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 SUPERFAMILY SSF47917 346 460 4.71E-50 T 14-10-2018 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 55.732 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VS_II0914 7d0e1230912004a749b633d977c04f9c 461 Gene3D G3DSA:1.10.1140.10 346 461 3.5E-53 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 Gene3D G3DSA:3.40.605.10 7 448 6.4E-139 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 SUPERFAMILY SSF53720 3 449 1.31E-121 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 Gene3D G3DSA:3.40.309.10 247 436 6.4E-139 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.755 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 6.3E-120 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 6.9E-225 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VS_2859 1d45286acdcc60fc4041ccd78ba6ff7d 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VS_II0254 2cd0e4618b35728e3faee165d907c15a 262 Gene3D G3DSA:2.60.120.620 2 209 1.1E-19 T 14-10-2018 VS_II0254 2cd0e4618b35728e3faee165d907c15a 262 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 12 206 1.9E-12 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase VS_II0254 2cd0e4618b35728e3faee165d907c15a 262 SUPERFAMILY SSF51197 6 251 2.47E-34 T 14-10-2018 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 SUPERFAMILY SSF53681 18 118 1.63E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 Pfam PF01177 Asp/Glu/Hydantoin racemase 21 225 1.1E-27 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 TIGRFAM TIGR00067 glut_race: glutamate racemase 19 250 4.3E-71 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 Gene3D G3DSA:3.40.50.1860 21 248 1.1E-82 T 14-10-2018 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 Gene3D G3DSA:3.40.50.1860 109 218 1.1E-82 T 14-10-2018 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 Hamap MF_00258 Glutamate racemase [murI]. 17 264 32.609 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 84 92 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_2996 13a001a233db1d68c23d9a4bd3dab3d6 276 SUPERFAMILY SSF53681 121 268 3.11E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Gene3D G3DSA:3.10.20.310 347 424 1.9E-25 T 14-10-2018 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Gene3D G3DSA:2.40.160.50 425 801 3.9E-119 T 14-10-2018 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Pfam PF01103 Surface antigen 448 801 1.4E-85 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 PIRSF PIRSF006076 1 801 9.0E-242 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 801 25.728 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 801 2.0E-276 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Gene3D G3DSA:3.10.20.310 92 174 4.6E-17 T 14-10-2018 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Pfam PF07244 Surface antigen variable number repeat 347 420 2.1E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Pfam PF07244 Surface antigen variable number repeat 176 263 7.9E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Pfam PF07244 Surface antigen variable number repeat 92 172 1.9E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Pfam PF07244 Surface antigen variable number repeat 266 344 9.1E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Gene3D G3DSA:3.10.20.310 175 263 5.3E-22 T 14-10-2018 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Gene3D G3DSA:3.10.20.310 264 346 1.0E-12 T 14-10-2018 VS_2344 178f297bb11dbb5353b4e78172237fc4 801 Gene3D G3DSA:3.10.20.310 18 91 1.2E-19 T 14-10-2018 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Pfam PF04563 RNA polymerase beta subunit 58 532 2.9E-57 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 40 1370 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:3.90.1110.10 333 472 1.6E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:2.40.270.10 1067 1273 6.9E-88 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:3.90.1100.10 51 188 5.2E-48 T 14-10-2018 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:3.90.1800.10 1283 1337 8.3E-11 T 14-10-2018 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:3.90.1100.10 473 647 3.4E-65 T 14-10-2018 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:3.90.1100.10 680 745 8.7E-21 T 14-10-2018 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 SUPERFAMILY SSF64484 43 1373 0.0 T 14-10-2018 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 45 1373 12.308 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Pfam PF04565 RNA polymerase Rpb2, domain 3 545 612 7.5E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:2.40.270.10 822 864 1.1E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Pfam PF10385 RNA polymerase beta subunit external 1 domain 623 688 3.4E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:2.40.50.150 865 986 3.2E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Pfam PF04561 RNA polymerase Rpb2, domain 2 370 486 3.0E-17 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Pfam PF04561 RNA polymerase Rpb2, domain 2 183 257 8.0E-8 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:2.40.50.100 746 820 8.7E-32 T 14-10-2018 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1095 1107 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Gene3D G3DSA:3.90.1110.10 189 295 3.0E-27 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Pfam PF00562 RNA polymerase Rpb2, domain 6 749 1295 6.1E-156 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2963 5a7b3461722f65436dd3d58c2b43209d 1374 Pfam PF04560 RNA polymerase Rpb2, domain 7 1297 1371 3.1E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 809 1.0E-94 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 35 281 2.8E-91 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Pfam PF08335 GlnD PII-uridylyltransferase 302 441 4.6E-44 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Pfam PF08335 GlnD PII-uridylyltransferase 832 915 2.2E-6 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Gene3D G3DSA:1.20.120.330 290 445 2.7E-55 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Gene3D G3DSA:3.30.460.10 117 289 7.5E-66 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 32 949 19.204 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Gene3D G3DSA:3.30.460.100 566 815 1.9E-90 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 SUPERFAMILY SSF81593 292 441 2.51E-43 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 SUPERFAMILY SSF81301 529 817 3.27E-85 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Gene3D G3DSA:1.20.120.330 816 949 1.4E-41 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Gene3D G3DSA:1.10.4050.10 1 114 1.9E-14 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 SUPERFAMILY SSF81593 820 947 2.2E-30 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 SUPERFAMILY SSF81301 26 291 3.01E-86 T 14-10-2018 VS_0416 69bd4d545ef837000a65b26720482a2e 949 Gene3D G3DSA:1.20.120.1510 452 565 6.8E-34 T 14-10-2018 VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 SUPERFAMILY SSF53850 95 291 1.19E-29 T 14-10-2018 VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 Gene3D G3DSA:1.10.10.10 8 94 7.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 Gene3D G3DSA:3.40.190.10 163 259 1.3E-43 T 14-10-2018 VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 Gene3D G3DSA:3.40.190.10 103 286 1.3E-43 T 14-10-2018 VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 Pfam PF03466 LysR substrate binding domain 95 289 1.4E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 SUPERFAMILY SSF46785 5 87 5.9E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2452 6b992f4dd249e7c47ecfbca8fd137693 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 4.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0764 c2f8b4d40841400bfd5a527bcfa12824 206 SMART SM00271 153 206 1.1E-7 T 14-10-2018 IPR001623 DnaJ domain VS_II0764 c2f8b4d40841400bfd5a527bcfa12824 206 Pfam PF12339 DNA-J related protein 17 139 1.8E-42 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal VS_II0764 c2f8b4d40841400bfd5a527bcfa12824 206 SUPERFAMILY SSF46565 154 204 1.03E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_II0764 c2f8b4d40841400bfd5a527bcfa12824 206 Pfam PF00226 DnaJ domain 160 204 1.8E-10 T 14-10-2018 IPR001623 DnaJ domain VS_II0764 c2f8b4d40841400bfd5a527bcfa12824 206 Gene3D G3DSA:1.10.287.110 144 206 8.8E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_2972 408b46b69731e8bfe542bab9988299f8 412 SUPERFAMILY SSF50465 320 412 2.13E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VS_2972 408b46b69731e8bfe542bab9988299f8 412 SUPERFAMILY SSF52540 24 237 2.1E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2972 408b46b69731e8bfe542bab9988299f8 412 Pfam PF03143 Elongation factor Tu C-terminal domain 316 410 2.1E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VS_2972 408b46b69731e8bfe542bab9988299f8 412 Pfam PF00009 Elongation factor Tu GTP binding domain 28 219 6.8E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2972 408b46b69731e8bfe542bab9988299f8 412 PRINTS PR00315 GTP-binding elongation factor signature 76 84 2.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2972 408b46b69731e8bfe542bab9988299f8 412 PRINTS PR00315 GTP-binding elongation factor signature 149 158 2.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2972 408b46b69731e8bfe542bab9988299f8 412 PRINTS PR00315 GTP-binding elongation factor signature 32 45 2.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2972 408b46b69731e8bfe542bab9988299f8 412 PRINTS PR00315 GTP-binding elongation factor signature 96 106 2.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2972 408b46b69731e8bfe542bab9988299f8 412 PRINTS PR00315 GTP-binding elongation factor signature 112 123 2.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2972 408b46b69731e8bfe542bab9988299f8 412 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 166 6.5E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2972 408b46b69731e8bfe542bab9988299f8 412 Gene3D G3DSA:2.40.30.10 224 352 1.4E-50 T 14-10-2018 VS_2972 408b46b69731e8bfe542bab9988299f8 412 Gene3D G3DSA:3.40.50.300 19 221 1.5E-69 T 14-10-2018 VS_2972 408b46b69731e8bfe542bab9988299f8 412 Gene3D G3DSA:2.40.30.10 356 411 2.2E-29 T 14-10-2018 VS_2972 408b46b69731e8bfe542bab9988299f8 412 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 19 411 6.2E-228 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2972 408b46b69731e8bfe542bab9988299f8 412 Hamap MF_00118_B Elongation factor Tu [tuf]. 19 412 58.946 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2972 408b46b69731e8bfe542bab9988299f8 412 SUPERFAMILY SSF50447 223 319 4.91E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2972 408b46b69731e8bfe542bab9988299f8 412 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 69 84 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_2972 408b46b69731e8bfe542bab9988299f8 412 Pfam PF03144 Elongation factor Tu domain 2 243 311 8.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VS_0815 311580004c5a35be03c6d071b17d5c8d 141 Pfam PF03646 FlaG protein 42 130 9.9E-23 T 14-10-2018 IPR005186 FlaG protein VS_0815 311580004c5a35be03c6d071b17d5c8d 141 SUPERFAMILY SSF160214 53 130 2.09E-21 T 14-10-2018 IPR035924 FlaG-like superfamily VS_0815 311580004c5a35be03c6d071b17d5c8d 141 Gene3D G3DSA:3.30.160.170 33 133 2.8E-13 T 14-10-2018 IPR035924 FlaG-like superfamily VS_0803 bea5a1cc7a7a391e6304d179c1e6da19 236 Pfam PF03963 Flagellar hook capping protein - N-terminal region 21 86 3.0E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein VS_0803 bea5a1cc7a7a391e6304d179c1e6da19 236 Gene3D G3DSA:2.30.30.910 95 222 1.3E-37 T 14-10-2018 VS_0803 bea5a1cc7a7a391e6304d179c1e6da19 236 Gene3D G3DSA:2.60.40.4070 111 197 1.3E-37 T 14-10-2018 VS_0803 bea5a1cc7a7a391e6304d179c1e6da19 236 Pfam PF13860 FlgD Ig-like domain 117 185 1.2E-19 T 14-10-2018 IPR025965 FlgD Ig-like domain VS_0803 bea5a1cc7a7a391e6304d179c1e6da19 236 Pfam PF13861 FlgD Tudor-like domain 94 230 2.8E-15 T 14-10-2018 IPR025963 FlgD Tudor-like domain VS_1720 2322e5d2f1f63294cfeb7cfb221a6d13 259 SUPERFAMILY SSF81301 65 221 5.07E-14 T 14-10-2018 VS_1720 2322e5d2f1f63294cfeb7cfb221a6d13 259 Gene3D G3DSA:3.30.460.10 75 196 3.7E-6 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Gene3D G3DSA:3.50.50.60 7 281 7.0E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 772 2.9E-19 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 SUPERFAMILY SSF51905 2 188 1.22E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 283 1.3E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Gene3D G3DSA:3.50.50.60 109 244 7.0E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 SUPERFAMILY SSF55124 503 642 1.1E-26 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PIRSF PIRSF037149 1 836 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.7E-8 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.7E-8 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.7E-8 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 1.7E-8 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 4.2E-18 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.2E-18 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 4.2E-18 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.2E-18 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 4.2E-18 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 26 32 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 SUPERFAMILY SSF56014 634 810 2.88E-50 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Pfam PF04324 BFD-like [2Fe-2S] binding domain 486 534 2.2E-5 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 7.4E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Gene3D G3DSA:3.30.413.10 632 805 1.8E-35 T 14-10-2018 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 802 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.5E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 9.1E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 9.1E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 SUPERFAMILY SSF51905 145 307 8.39E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1027 e744f41fc969c14c1aa2c597bd1bad47 860 Gene3D G3DSA:1.10.10.1100 424 478 2.5E-14 T 14-10-2018 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 SUPERFAMILY SSF47384 195 276 5.1E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 SUPERFAMILY SSF158472 160 210 4.97E-6 T 14-10-2018 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 SUPERFAMILY SSF55874 266 429 2.49E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 429 8.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 Gene3D G3DSA:1.10.287.130 163 278 1.8E-24 T 14-10-2018 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 SMART SM00388 212 277 2.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 SMART SM00387 320 431 5.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 3.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 Gene3D G3DSA:3.30.565.10 281 436 9.0E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 SMART SM00304 159 211 7.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 Pfam PF00672 HAMP domain 162 207 2.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0043 f4f5e8232c9637a491638a384f0f37f9 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 276 2.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 SUPERFAMILY SSF51366 278 481 5.49E-52 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 276 483 30.537 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 278 477 1.1E-53 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 Pfam PF00218 Indole-3-glycerol phosphate synthase 23 272 5.6E-94 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 Gene3D G3DSA:3.20.20.70 277 477 7.0E-174 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 Gene3D G3DSA:3.20.20.70 26 276 7.0E-174 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 68 86 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 21 275 34.733 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VS_1969 bbddd19deb6f8e6e1ba882cebb12b4cd 483 SUPERFAMILY SSF51366 29 274 3.18E-79 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 Gene3D G3DSA:3.30.70.270 369 523 5.5E-18 T 14-10-2018 VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 Pfam PF00563 EAL domain 537 764 7.4E-41 T 14-10-2018 IPR001633 EAL domain VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 SMART SM00052 528 769 2.4E-28 T 14-10-2018 IPR001633 EAL domain VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 511 3.2E-14 T 14-10-2018 IPR000160 GGDEF domain VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 SMART SM00267 363 527 5.8E-7 T 14-10-2018 IPR000160 GGDEF domain VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 SUPERFAMILY SSF55073 379 512 1.49E-19 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 512 2.0E-15 T 14-10-2018 IPR000160 GGDEF domain VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 SUPERFAMILY SSF141868 538 773 1.83E-46 T 14-10-2018 IPR035919 EAL domain superfamily VS_1855 af72d78bf6c180e0a3dfbcf5a79981d0 794 Gene3D G3DSA:3.20.20.450 530 781 8.2E-48 T 14-10-2018 IPR035919 EAL domain superfamily VS_1426 a91c3daefc719faee22ff008667db49a 638 Pfam PF00005 ABC transporter 19 185 2.9E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1426 a91c3daefc719faee22ff008667db49a 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1426 a91c3daefc719faee22ff008667db49a 638 SUPERFAMILY SSF52540 313 519 2.31E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1426 a91c3daefc719faee22ff008667db49a 638 SMART SM00382 344 514 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1426 a91c3daefc719faee22ff008667db49a 638 SMART SM00382 28 230 1.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1426 a91c3daefc719faee22ff008667db49a 638 Pfam PF16326 ABC transporter C-terminal domain 564 632 1.2E-20 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VS_1426 a91c3daefc719faee22ff008667db49a 638 Gene3D G3DSA:1.10.287.380 554 637 7.7E-28 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VS_1426 a91c3daefc719faee22ff008667db49a 638 Pfam PF12848 ABC transporter 224 299 9.1E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain VS_1426 a91c3daefc719faee22ff008667db49a 638 Gene3D G3DSA:3.40.50.300 281 550 1.8E-66 T 14-10-2018 VS_1426 a91c3daefc719faee22ff008667db49a 638 Gene3D G3DSA:3.40.50.300 7 279 2.0E-66 T 14-10-2018 VS_1426 a91c3daefc719faee22ff008667db49a 638 Pfam PF00005 ABC transporter 336 469 1.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1426 a91c3daefc719faee22ff008667db49a 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1426 a91c3daefc719faee22ff008667db49a 638 SUPERFAMILY SSF52540 4 239 7.91E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0799 ae08b8da52917a3e6d72ab921445e621 308 Pfam PF01584 CheW-like domain 21 155 5.9E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_0799 ae08b8da52917a3e6d72ab921445e621 308 SUPERFAMILY SSF52172 183 306 5.69E-26 T 14-10-2018 IPR011006 CheY-like superfamily VS_0799 ae08b8da52917a3e6d72ab921445e621 308 SMART SM00448 182 302 5.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0799 ae08b8da52917a3e6d72ab921445e621 308 Gene3D G3DSA:2.40.50.180 39 153 5.3E-28 T 14-10-2018 VS_0799 ae08b8da52917a3e6d72ab921445e621 308 Pfam PF00072 Response regulator receiver domain 184 300 9.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0799 ae08b8da52917a3e6d72ab921445e621 308 SUPERFAMILY SSF50341 16 156 2.49E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VS_0799 ae08b8da52917a3e6d72ab921445e621 308 Gene3D G3DSA:3.40.50.2300 168 308 5.0E-26 T 14-10-2018 VS_0799 ae08b8da52917a3e6d72ab921445e621 308 Gene3D G3DSA:2.30.30.40 23 147 5.3E-28 T 14-10-2018 VS_0799 ae08b8da52917a3e6d72ab921445e621 308 PIRSF PIRSF002867 1 308 8.7E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VS_0799 ae08b8da52917a3e6d72ab921445e621 308 SMART SM00260 17 153 9.3E-25 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_2080 5891303c067de48c8107cb45b139bf2f 663 SMART SM00304 334 386 2.8E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_2080 5891303c067de48c8107cb45b139bf2f 663 Gene3D G3DSA:1.10.287.950 334 663 1.9E-70 T 14-10-2018 VS_2080 5891303c067de48c8107cb45b139bf2f 663 SMART SM00283 401 662 9.0E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_2080 5891303c067de48c8107cb45b139bf2f 663 SUPERFAMILY SSF58104 354 663 1.18E-73 T 14-10-2018 VS_2080 5891303c067de48c8107cb45b139bf2f 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 629 2.6E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 Gene3D G3DSA:2.40.420.20 281 361 2.3E-73 T 14-10-2018 VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 Gene3D G3DSA:2.40.50.100 67 199 2.3E-73 T 14-10-2018 VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 Pfam PF13533 Biotin-lipoyl like 71 113 3.6E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 Gene3D G3DSA:1.10.287.470 101 160 2.3E-73 T 14-10-2018 VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 SUPERFAMILY SSF111369 59 274 2.88E-30 T 14-10-2018 VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 Pfam PF13437 HlyD family secretion protein 164 264 9.3E-7 T 14-10-2018 VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 Gene3D G3DSA:2.40.30.170 58 280 2.3E-73 T 14-10-2018 VS_1987 133c2aae1a97def5f31eeaec680ddfcf 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 363 2.5E-69 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_3019 55eacaf2c7e1335a7cb0adeb3eee0971 327 PIRSF PIRSF003097 31 323 7.1E-59 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 SMART SM00422 7 75 9.8E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 5.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 5.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 5.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 7 145 1.3E-57 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 SUPERFAMILY SSF46955 6 117 1.32E-27 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 Pfam PF13411 MerR HTH family regulatory protein 8 73 2.4E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2133 342ab3f7f0c32bade0230cb822b34a06 146 Gene3D G3DSA:1.10.1660.10 2 130 3.5E-33 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.9E-29 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.9E-29 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.9E-29 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.9E-29 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.9E-29 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.9E-29 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.9E-29 T 14-10-2018 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 Gene3D G3DSA:1.10.3860.10 20 456 5.6E-99 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 6.2E-99 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VS_1705 d0e819253807111e89db02aed9d9d8fc 457 SUPERFAMILY SSF118215 29 441 1.83E-90 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 PIRSF PIRSF002599 1 76 1.6E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 4 71 2.4E-41 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 SMART SM00357 6 70 3.1E-25 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 SUPERFAMILY SSF50249 2 70 4.93E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 PRINTS PR00050 Cold shock protein signature 28 37 8.6E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 PRINTS PR00050 Cold shock protein signature 43 61 8.6E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 PRINTS PR00050 Cold shock protein signature 7 22 8.6E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 8.3E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_1072 4471ba2dc22efe1eac607d6c47400a4d 76 Gene3D G3DSA:2.40.50.140 2 76 2.0E-25 T 14-10-2018 VS_1610 c70105e6d8890ce13dfa8ab3c45c5b21 154 PIRSF PIRSF021320 1 154 4.2E-45 T 14-10-2018 IPR009326 Protein of unknown function DUF984 VS_1610 c70105e6d8890ce13dfa8ab3c45c5b21 154 Gene3D G3DSA:3.10.400.10 1 154 2.4E-61 T 14-10-2018 VS_1610 c70105e6d8890ce13dfa8ab3c45c5b21 154 Pfam PF04266 ASCH domain 42 153 1.0E-24 T 14-10-2018 IPR007374 ASCH domain VS_1610 c70105e6d8890ce13dfa8ab3c45c5b21 154 SUPERFAMILY SSF88697 3 153 4.22E-52 T 14-10-2018 IPR015947 PUA-like superfamily VS_1610 c70105e6d8890ce13dfa8ab3c45c5b21 154 SMART SM01022 30 153 6.1E-40 T 14-10-2018 IPR007374 ASCH domain VS_0456 65255a0d2f991fa2744537504757d359 908 SUPERFAMILY SSF52540 5 416 8.24E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0456 65255a0d2f991fa2744537504757d359 908 Pfam PF02810 SEC-C motif 888 906 3.3E-10 T 14-10-2018 IPR004027 SEC-C motif VS_0456 65255a0d2f991fa2744537504757d359 908 SUPERFAMILY SSF81886 620 896 1.14E-81 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VS_0456 65255a0d2f991fa2744537504757d359 908 Gene3D G3DSA:1.10.3060.10 621 833 9.6E-75 T 14-10-2018 VS_0456 65255a0d2f991fa2744537504757d359 908 SUPERFAMILY SSF81767 227 369 3.27E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VS_0456 65255a0d2f991fa2744537504757d359 908 SUPERFAMILY SSF52540 418 610 1.0E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0456 65255a0d2f991fa2744537504757d359 908 Pfam PF01043 SecA preprotein cross-linking domain 232 359 8.3E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VS_0456 65255a0d2f991fa2744537504757d359 908 SMART SM00958 228 359 3.0E-80 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VS_0456 65255a0d2f991fa2744537504757d359 908 SMART SM00957 6 403 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VS_0456 65255a0d2f991fa2744537504757d359 908 Pfam PF07517 SecA DEAD-like domain 7 403 1.5E-132 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VS_0456 65255a0d2f991fa2744537504757d359 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.85 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 Gene3D G3DSA:3.90.1440.10 229 369 4.6E-175 T 14-10-2018 VS_0456 65255a0d2f991fa2744537504757d359 908 ProSitePatterns PS01312 SecA family signature. 501 516 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VS_0456 65255a0d2f991fa2744537504757d359 908 PRINTS PR00906 SecA protein signature 101 115 2.3E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 PRINTS PR00906 SecA protein signature 170 190 2.3E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 PRINTS PR00906 SecA protein signature 340 362 2.3E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 PRINTS PR00906 SecA protein signature 414 427 2.3E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 PRINTS PR00906 SecA protein signature 377 394 2.3E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 PRINTS PR00906 SecA protein signature 117 127 2.3E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 PRINTS PR00906 SecA protein signature 63 87 2.3E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VS_0456 65255a0d2f991fa2744537504757d359 908 Gene3D G3DSA:3.40.50.300 22 416 4.6E-175 T 14-10-2018 VS_0456 65255a0d2f991fa2744537504757d359 908 Pfam PF07516 SecA Wing and Scaffold domain 617 829 3.4E-65 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VS_0456 65255a0d2f991fa2744537504757d359 908 Gene3D G3DSA:3.40.50.300 418 620 4.8E-85 T 14-10-2018 VS_1328 f06a1c587aba8e34868511d9daaf8689 583 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 582 4.6E-108 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VS_1328 f06a1c587aba8e34868511d9daaf8689 583 Pfam PF05947 Type VI secretion system, TssF 7 580 1.1E-125 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 SMART SM00342 154 237 4.7E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 Pfam PF12833 Helix-turn-helix domain 160 237 3.2E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 Gene3D G3DSA:1.10.10.60 188 242 5.2E-18 T 14-10-2018 VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 SUPERFAMILY SSF51182 16 164 3.74E-10 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 Gene3D G3DSA:1.10.10.60 137 187 3.7E-11 T 14-10-2018 VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 237 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 206 221 6.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 SUPERFAMILY SSF46689 190 238 7.17E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1093 9c5cd95945e671d478a31d42dc8b1b32 244 Gene3D G3DSA:2.60.120.10 2 74 3.8E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_2041 56aed6a91365f1657559082d4366fde8 427 Gene3D G3DSA:3.40.640.10 58 327 3.9E-170 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2041 56aed6a91365f1657559082d4366fde8 427 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 49.121 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VS_2041 56aed6a91365f1657559082d4366fde8 427 PIRSF PIRSF000521 21 421 1.9E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2041 56aed6a91365f1657559082d4366fde8 427 SUPERFAMILY SSF53383 4 420 9.86E-137 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2041 56aed6a91365f1657559082d4366fde8 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 1.2E-178 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VS_2041 56aed6a91365f1657559082d4366fde8 427 Pfam PF00202 Aminotransferase class-III 24 418 1.6E-130 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2041 56aed6a91365f1657559082d4366fde8 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2041 56aed6a91365f1657559082d4366fde8 427 Gene3D G3DSA:3.90.1150.10 7 412 3.9E-170 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2434 8392197c37f722bbae297285c7fae276 334 SMART SM00028 121 154 37.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 SMART SM00028 217 250 5.3E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 SMART SM00028 87 120 0.58 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 SMART SM00028 183 216 42.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 SMART SM00028 281 314 0.0041 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 SUPERFAMILY SSF48452 189 314 9.67E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 Pfam PF13374 Tetratricopeptide repeat 283 309 0.012 T 14-10-2018 VS_2434 8392197c37f722bbae297285c7fae276 334 Gene3D G3DSA:1.25.40.10 279 334 2.4E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 Pfam PF13181 Tetratricopeptide repeat 89 120 0.0018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 Gene3D G3DSA:1.25.40.10 158 278 2.1E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 SUPERFAMILY SSF48452 48 248 7.59E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2434 8392197c37f722bbae297285c7fae276 334 Pfam PF14559 Tetratricopeptide repeat 230 275 4.9E-7 T 14-10-2018 VS_2434 8392197c37f722bbae297285c7fae276 334 Gene3D G3DSA:1.25.40.10 30 155 3.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0044 b076a8b23a537c23577802b0874b49a0 234 SUPERFAMILY SSF52172 2 127 1.32E-34 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0044 b076a8b23a537c23577802b0874b49a0 234 Gene3D G3DSA:1.10.10.10 122 234 2.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0044 b076a8b23a537c23577802b0874b49a0 234 SMART SM00862 152 228 3.4E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0044 b076a8b23a537c23577802b0874b49a0 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 5.3E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0044 b076a8b23a537c23577802b0874b49a0 234 Gene3D G3DSA:3.40.50.2300 1 121 5.5E-31 T 14-10-2018 VS_II0044 b076a8b23a537c23577802b0874b49a0 234 SUPERFAMILY SSF46894 134 229 2.83E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0044 b076a8b23a537c23577802b0874b49a0 234 SMART SM00448 4 114 9.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0044 b076a8b23a537c23577802b0874b49a0 234 Pfam PF00072 Response regulator receiver domain 7 114 7.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0723 6feef23825b3fb1c00ece31d421e486c 252 SUPERFAMILY SSF53850 25 250 4.13E-60 T 14-10-2018 VS_II0723 6feef23825b3fb1c00ece31d421e486c 252 PIRSF PIRSF004846 1 252 2.4E-63 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VS_II0723 6feef23825b3fb1c00ece31d421e486c 252 Pfam PF13531 Bacterial extracellular solute-binding protein 27 250 2.3E-42 T 14-10-2018 VS_II0723 6feef23825b3fb1c00ece31d421e486c 252 Gene3D G3DSA:3.40.190.10 29 249 3.6E-73 T 14-10-2018 VS_II0723 6feef23825b3fb1c00ece31d421e486c 252 Gene3D G3DSA:3.40.190.10 105 215 3.6E-73 T 14-10-2018 VS_II0723 6feef23825b3fb1c00ece31d421e486c 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 248 3.8E-60 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 SUPERFAMILY SSF49503 37 136 8.04E-22 T 14-10-2018 IPR008972 Cupredoxin VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 PRINTS PR00155 Amicyanin family signature 62 77 1.1E-12 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 PRINTS PR00155 Amicyanin family signature 83 98 1.1E-12 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 PRINTS PR00155 Amicyanin family signature 42 61 1.1E-12 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 PRINTS PR00155 Amicyanin family signature 99 114 1.1E-12 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 PRINTS PR00156 Type I copper blue protein family signature 48 61 3.1E-6 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 PRINTS PR00156 Type I copper blue protein family signature 94 108 3.1E-6 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 PRINTS PR00156 Type I copper blue protein family signature 62 77 3.1E-6 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 38 116 1.1E-7 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 VS_II0661 89353d2251d0dae015a2bc3c5762d671 154 Gene3D G3DSA:2.60.40.420 26 150 1.1E-26 T 14-10-2018 IPR008972 Cupredoxin VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 SMART SM00847 398 488 2.0E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 SUPERFAMILY SSF52540 33 472 1.31E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 SMART SM00487 9 197 2.1E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 15 829 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 Pfam PF00270 DEAD/DEAH box helicase 21 173 9.8E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 Gene3D G3DSA:1.20.120.1080 380 490 7.0E-8 T 14-10-2018 VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 PIRSF PIRSF005496 11 831 0.0 T 14-10-2018 VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 Pfam PF08482 ATP-dependent helicase C-terminal 685 817 7.5E-52 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 Gene3D G3DSA:3.40.50.300 10 190 5.9E-49 T 14-10-2018 VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 SMART SM00490 237 338 4.1E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 Pfam PF00271 Helicase conserved C-terminal domain 211 337 1.3E-13 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 Gene3D G3DSA:3.40.50.300 191 355 7.2E-51 T 14-10-2018 VS_2526 0bd38db3e0023d162b3bee09c3bd6041 832 Pfam PF04408 Helicase associated domain (HA2) 401 480 1.6E-9 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VS_2074 db07ef9041c6bfa5099d3725982afdc2 288 Pfam PF01636 Phosphotransferase enzyme family 31 218 1.3E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VS_2074 db07ef9041c6bfa5099d3725982afdc2 288 Gene3D G3DSA:3.90.1200.10 112 279 7.4E-11 T 14-10-2018 VS_2074 db07ef9041c6bfa5099d3725982afdc2 288 SUPERFAMILY SSF56112 25 266 2.04E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_0009 691eaae9a5e0fa2ca684b7a7ad682318 276 SMART SM00079 51 271 0.0035 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VS_0009 691eaae9a5e0fa2ca684b7a7ad682318 276 Gene3D G3DSA:3.40.190.10 118 231 4.7E-28 T 14-10-2018 VS_0009 691eaae9a5e0fa2ca684b7a7ad682318 276 SMART SM00062 51 272 9.7E-75 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0009 691eaae9a5e0fa2ca684b7a7ad682318 276 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 73 86 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VS_0009 691eaae9a5e0fa2ca684b7a7ad682318 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 270 9.8E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0009 691eaae9a5e0fa2ca684b7a7ad682318 276 SUPERFAMILY SSF53850 48 273 1.63E-57 T 14-10-2018 VS_3045 674656cdb3a351f6a0d35d8283052a42 310 Gene3D G3DSA:1.10.443.10 121 298 6.2E-54 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VS_3045 674656cdb3a351f6a0d35d8283052a42 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 55.102 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VS_3045 674656cdb3a351f6a0d35d8283052a42 310 SUPERFAMILY SSF56349 15 298 2.74E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VS_3045 674656cdb3a351f6a0d35d8283052a42 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 19 306 7.9E-106 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 VS_3045 674656cdb3a351f6a0d35d8283052a42 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 100 5.7E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VS_3045 674656cdb3a351f6a0d35d8283052a42 310 Gene3D G3DSA:1.10.150.130 14 108 3.1E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VS_3045 674656cdb3a351f6a0d35d8283052a42 310 Pfam PF00589 Phage integrase family 122 290 3.7E-46 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VS_1946 98e8fb986b473c75b56f04a88eb0a2c1 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 3.2E-29 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VS_1946 98e8fb986b473c75b56f04a88eb0a2c1 417 Gene3D G3DSA:3.30.360.10 159 355 2.9E-142 T 14-10-2018 VS_1946 98e8fb986b473c75b56f04a88eb0a2c1 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 5.5E-33 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VS_1946 98e8fb986b473c75b56f04a88eb0a2c1 417 SUPERFAMILY SSF51735 3 179 1.24E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1946 98e8fb986b473c75b56f04a88eb0a2c1 417 Gene3D G3DSA:3.40.50.720 4 398 2.9E-142 T 14-10-2018 VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 SMART SM00116 165 212 11.0 T 14-10-2018 IPR000644 CBS domain VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 SMART SM00116 229 276 3.9E-8 T 14-10-2018 IPR000644 CBS domain VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 SUPERFAMILY SSF54631 155 273 1.89E-25 T 14-10-2018 VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 Gene3D G3DSA:3.10.580.10 153 286 5.7E-26 T 14-10-2018 VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 617 3.8E-40 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 435 2.1E-42 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 Gene3D G3DSA:2.60.120.10 8 147 2.7E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 Pfam PF00571 CBS domain 222 273 1.6E-10 T 14-10-2018 IPR000644 CBS domain VS_1252 8b7c32e2bd14ab778dec89bdda01b913 620 SUPERFAMILY SSF51206 8 133 4.32E-15 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 SUPERFAMILY SSF53697 245 610 4.64E-114 T 14-10-2018 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 Gene3D G3DSA:3.60.20.10 2 241 8.6E-81 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 Gene3D G3DSA:3.40.50.10490 249 609 9.3E-147 T 14-10-2018 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 7.0E-22 T 14-10-2018 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 Pfam PF01380 SIS domain 290 418 6.8E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 Pfam PF01380 SIS domain 463 592 1.3E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.436 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 5.0E-260 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 Gene3D G3DSA:3.40.50.10490 448 595 9.3E-147 T 14-10-2018 VS_0394 6dc814bd692664ea00dc98d9f1f6b324 610 SUPERFAMILY SSF56235 2 234 4.55E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_2172 c2f5fcf09b3e9bb2678d9ad1d2be0ff5 363 Gene3D G3DSA:1.10.287.470 97 156 2.1E-68 T 14-10-2018 VS_2172 c2f5fcf09b3e9bb2678d9ad1d2be0ff5 363 Gene3D G3DSA:2.40.420.20 273 340 2.1E-68 T 14-10-2018 VS_2172 c2f5fcf09b3e9bb2678d9ad1d2be0ff5 363 Gene3D G3DSA:2.40.30.170 49 272 2.1E-68 T 14-10-2018 VS_2172 c2f5fcf09b3e9bb2678d9ad1d2be0ff5 363 Gene3D G3DSA:2.40.50.100 62 190 2.1E-68 T 14-10-2018 VS_2172 c2f5fcf09b3e9bb2678d9ad1d2be0ff5 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 263 1.7E-30 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_2172 c2f5fcf09b3e9bb2678d9ad1d2be0ff5 363 SUPERFAMILY SSF111369 52 267 3.01E-39 T 14-10-2018 VS_2172 c2f5fcf09b3e9bb2678d9ad1d2be0ff5 363 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 343 1.7E-83 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Pfam PF16124 RecQ zinc-binding 347 408 5.3E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 SUPERFAMILY SSF52540 16 203 2.38E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Pfam PF00270 DEAD/DEAH box helicase 32 191 1.3E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Pfam PF00570 HRDC domain 538 604 4.1E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 607 2.5E-253 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 SMART SM00490 254 335 2.7E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Gene3D G3DSA:1.10.150.80 528 611 7.9E-28 T 14-10-2018 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Pfam PF09382 RQC domain 410 518 4.6E-37 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 SUPERFAMILY SSF47819 535 610 1.46E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Gene3D G3DSA:3.40.50.300 8 212 8.4E-80 T 14-10-2018 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 467 2.8E-188 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Gene3D G3DSA:3.40.50.300 213 344 1.9E-43 T 14-10-2018 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 SMART SM00956 415 518 1.5E-50 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 SMART SM00341 534 610 4.2E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Gene3D G3DSA:1.10.10.10 345 527 3.5E-54 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 SMART SM00487 26 222 1.1E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 SUPERFAMILY SSF52540 212 461 1.71E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3077 fa4bcc6725bdb176fa585812f3d2b627 612 Pfam PF00271 Helicase conserved C-terminal domain 231 334 4.1E-20 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0622 b889fedaa476ec631862d04530c30336 265 Gene3D G3DSA:1.10.10.10 6 109 1.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0622 b889fedaa476ec631862d04530c30336 265 SMART SM00862 28 103 2.5E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0622 b889fedaa476ec631862d04530c30336 265 SUPERFAMILY SSF46894 26 104 1.11E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0622 b889fedaa476ec631862d04530c30336 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 103 2.9E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0082 0f92953aee611eee2c82eac1988695b2 455 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 8 455 1.0E-211 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VS_0082 0f92953aee611eee2c82eac1988695b2 455 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 454 5.7E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 1.6E-29 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 1.6E-29 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.6E-29 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 1.6E-29 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.6E-29 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 323 6.0E-70 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_0082 0f92953aee611eee2c82eac1988695b2 455 SUPERFAMILY SSF51905 4 369 8.85E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 1.0E-63 T 14-10-2018 VS_0082 0f92953aee611eee2c82eac1988695b2 455 SUPERFAMILY SSF55424 341 455 8.59E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_0082 0f92953aee611eee2c82eac1988695b2 455 Gene3D G3DSA:3.50.50.60 148 265 5.6E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0082 0f92953aee611eee2c82eac1988695b2 455 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VS_0082 0f92953aee611eee2c82eac1988695b2 455 Gene3D G3DSA:3.50.50.60 9 319 5.6E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0082 0f92953aee611eee2c82eac1988695b2 455 PIRSF PIRSF000350 2 449 4.1E-83 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VS_0082 0f92953aee611eee2c82eac1988695b2 455 Gene3D G3DSA:3.30.390.30 343 455 4.0E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_0709 777dcc0925a1d2d11a9d681f6939dfc3 136 Gene3D G3DSA:3.30.70.260 50 136 2.7E-32 T 14-10-2018 VS_0709 777dcc0925a1d2d11a9d681f6939dfc3 136 SUPERFAMILY SSF117991 51 136 1.18E-30 T 14-10-2018 IPR027471 YbeD-like domain superfamily VS_0709 777dcc0925a1d2d11a9d681f6939dfc3 136 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 50 136 26.502 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VS_0709 777dcc0925a1d2d11a9d681f6939dfc3 136 Pfam PF04359 Protein of unknown function (DUF493) 56 136 2.9E-28 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VS_1013 fd3771e6773d068f20ad4a7aff2b2ef0 222 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 50 222 4.6E-67 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VS_1013 fd3771e6773d068f20ad4a7aff2b2ef0 222 SUPERFAMILY SSF52540 33 222 1.13E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1013 fd3771e6773d068f20ad4a7aff2b2ef0 222 Gene3D G3DSA:3.40.50.300 24 222 4.4E-67 T 14-10-2018 VS_1013 fd3771e6773d068f20ad4a7aff2b2ef0 222 PIRSF PIRSF015617 27 222 4.3E-64 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VS_1013 fd3771e6773d068f20ad4a7aff2b2ef0 222 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 22 47 2.5E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VS_1013 fd3771e6773d068f20ad4a7aff2b2ef0 222 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 54 222 6.5E-58 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VS_2728 8750de3d70e6f30c09807c088c912b21 368 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 347 1.2E-117 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VS_2728 8750de3d70e6f30c09807c088c912b21 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 345 2.3E-71 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 Gene3D G3DSA:3.40.50.1000 13 266 4.5E-72 T 14-10-2018 IPR023214 HAD superfamily VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 14-10-2018 VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 Gene3D G3DSA:3.30.1240.10 90 197 4.5E-72 T 14-10-2018 VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 14-10-2018 VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 1.0E-64 T 14-10-2018 VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 2.3E-33 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 1.1E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 VS_3038 ced9143f152ffe49f4ff132c6f55d319 275 SUPERFAMILY SSF56784 7 274 9.79E-68 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0501 c5a3d2480f99953fb82d45d8efc92924 709 Gene3D G3DSA:2.40.170.20 170 709 7.2E-129 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_II0501 c5a3d2480f99953fb82d45d8efc92924 709 Gene3D G3DSA:2.170.130.10 38 168 6.7E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_II0501 c5a3d2480f99953fb82d45d8efc92924 709 SUPERFAMILY SSF56935 24 709 6.18E-133 T 14-10-2018 VS_II0501 c5a3d2480f99953fb82d45d8efc92924 709 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 709 9.2E-125 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VS_II0501 c5a3d2480f99953fb82d45d8efc92924 709 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 14-10-2018 IPR010916 TonB box, conserved site VS_II0501 c5a3d2480f99953fb82d45d8efc92924 709 Pfam PF00593 TonB dependent receptor 245 707 1.7E-55 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_II0501 c5a3d2480f99953fb82d45d8efc92924 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 8.6E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_0540 d43905d7716d4ff68b5a2973335f1c04 243 Gene3D G3DSA:2.40.50.1020 167 243 5.3E-10 T 14-10-2018 VS_0540 d43905d7716d4ff68b5a2973335f1c04 243 Gene3D G3DSA:3.40.50.2300 1 131 1.4E-27 T 14-10-2018 VS_0540 d43905d7716d4ff68b5a2973335f1c04 243 Pfam PF00072 Response regulator receiver domain 5 111 9.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0540 d43905d7716d4ff68b5a2973335f1c04 243 Pfam PF04397 LytTr DNA-binding domain 148 240 2.1E-19 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VS_0540 d43905d7716d4ff68b5a2973335f1c04 243 SMART SM00850 147 241 5.8E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VS_0540 d43905d7716d4ff68b5a2973335f1c04 243 SMART SM00448 2 112 2.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0540 d43905d7716d4ff68b5a2973335f1c04 243 SUPERFAMILY SSF52172 1 124 2.7E-27 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1102 8373cb5e2a5a5f99420cc9d5da602c2b 223 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 12 111 6.5E-27 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family VS_II1102 8373cb5e2a5a5f99420cc9d5da602c2b 223 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 23 107 4.0E-27 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family VS_0201 99a6cf6b3b1cadfa2f53b50da3c5fc9f 328 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 17 327 1.3E-126 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VS_0201 99a6cf6b3b1cadfa2f53b50da3c5fc9f 328 Gene3D G3DSA:3.40.50.720 18 322 3.0E-115 T 14-10-2018 VS_0201 99a6cf6b3b1cadfa2f53b50da3c5fc9f 328 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 16 328 46.031 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VS_0201 99a6cf6b3b1cadfa2f53b50da3c5fc9f 328 SUPERFAMILY SSF51735 16 324 5.27E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0201 99a6cf6b3b1cadfa2f53b50da3c5fc9f 328 Gene3D G3DSA:3.90.25.10 188 310 3.0E-115 T 14-10-2018 VS_0201 99a6cf6b3b1cadfa2f53b50da3c5fc9f 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 256 5.6E-45 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VS_2189 64643c28194456ba319dbd04742c0224 298 Gene3D G3DSA:1.10.12.10 236 286 6.6E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VS_2189 64643c28194456ba319dbd04742c0224 298 SUPERFAMILY SSF52096 31 294 1.97E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_2189 64643c28194456ba319dbd04742c0224 298 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 28 297 55.669 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VS_2189 64643c28194456ba319dbd04742c0224 298 TIGRFAM TIGR01929 menB: naphthoate synthase 35 294 6.1E-145 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VS_2189 64643c28194456ba319dbd04742c0224 298 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 136 156 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VS_2189 64643c28194456ba319dbd04742c0224 298 Pfam PF00378 Enoyl-CoA hydratase/isomerase 44 292 3.7E-78 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VS_2189 64643c28194456ba319dbd04742c0224 298 Gene3D G3DSA:3.90.226.10 15 235 2.0E-84 T 14-10-2018 VS_II0498 50622f7f8669ec516af128da1bddebf1 261 Pfam PF00005 ABC transporter 21 166 7.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0498 50622f7f8669ec516af128da1bddebf1 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0498 50622f7f8669ec516af128da1bddebf1 261 SMART SM00382 26 214 5.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0498 50622f7f8669ec516af128da1bddebf1 261 SUPERFAMILY SSF52540 3 229 4.11E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0498 50622f7f8669ec516af128da1bddebf1 261 Gene3D G3DSA:3.40.50.300 1 254 3.8E-63 T 14-10-2018 VS_II0040 62e4e7f4cf772df6f96661946a207aab 211 Pfam PF01081 KDPG and KHG aldolase 6 198 8.7E-76 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_II0040 62e4e7f4cf772df6f96661946a207aab 211 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_II0040 62e4e7f4cf772df6f96661946a207aab 211 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 207 4.6E-82 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_II0040 62e4e7f4cf772df6f96661946a207aab 211 SUPERFAMILY SSF51569 3 209 1.72E-68 T 14-10-2018 VS_II0040 62e4e7f4cf772df6f96661946a207aab 211 Gene3D G3DSA:3.20.20.70 1 211 1.5E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0040 62e4e7f4cf772df6f96661946a207aab 211 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_2581 f8cb5ceae240372441d350c822227303 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VS_2581 f8cb5ceae240372441d350c822227303 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VS_2581 f8cb5ceae240372441d350c822227303 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 16.94 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VS_2581 f8cb5ceae240372441d350c822227303 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VS_2581 f8cb5ceae240372441d350c822227303 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 5.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VS_2581 f8cb5ceae240372441d350c822227303 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 7.8E-30 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VS_0754 570aa13fd58fed44371202637fe6f612 127 PIRSF PIRSF005610 1 121 1.3E-16 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VS_0754 570aa13fd58fed44371202637fe6f612 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 7.8E-39 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VS_1730 ec36a5c076e55ea2c55bf5ae752ea28d 171 Pfam PF01322 Cytochrome C' 52 168 2.9E-22 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 VS_1730 ec36a5c076e55ea2c55bf5ae752ea28d 171 Gene3D G3DSA:1.20.120.10 46 169 5.3E-23 T 14-10-2018 VS_1730 ec36a5c076e55ea2c55bf5ae752ea28d 171 SUPERFAMILY SSF47175 47 169 5.89E-28 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VS_2238 7d3994e94865a705301a3c8fc9682bee 259 SUPERFAMILY SSF52540 2 228 8.33E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2238 7d3994e94865a705301a3c8fc9682bee 259 Gene3D G3DSA:3.40.50.300 1 242 3.0E-56 T 14-10-2018 VS_2238 7d3994e94865a705301a3c8fc9682bee 259 SMART SM00382 29 199 8.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2238 7d3994e94865a705301a3c8fc9682bee 259 Pfam PF00005 ABC transporter 20 148 3.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2953 68b86751c1bb1ef8f68586238783434d 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 227 1.3E-58 T 14-10-2018 IPR010858 Protein of unknown function DUF1481 VS_2953 68b86751c1bb1ef8f68586238783434d 232 PIRSF PIRSF028160 1 232 1.4E-97 T 14-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 Pfam PF00140 Sigma-70 factor, region 1.2 32 58 3.7E-6 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 20 302 53.348 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 Gene3D G3DSA:1.20.120.1810 9 140 3.1E-26 T 14-10-2018 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 Pfam PF04545 Sigma-70, region 4 247 298 1.6E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 Gene3D G3DSA:1.20.140.160 150 301 1.6E-13 T 14-10-2018 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 33 300 1.4E-125 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 SUPERFAMILY SSF88946 29 140 8.9E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 Pfam PF04542 Sigma-70 region 2 71 140 7.1E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 95 108 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 PRINTS PR00046 Major sigma-70 factor signature 251 263 2.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 PRINTS PR00046 Major sigma-70 factor signature 270 285 2.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 PRINTS PR00046 Major sigma-70 factor signature 285 296 2.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 PRINTS PR00046 Major sigma-70 factor signature 95 108 2.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 SUPERFAMILY SSF88659 216 300 5.79E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 66 299 3.0E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_3018 3cb9c9c4f2eb61ef349a43f6132e78c5 303 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 270 296 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_II0467 7bf681f9da25bda74dbc6ab5d9b840d4 294 SUPERFAMILY SSF46785 6 114 2.1E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0467 7bf681f9da25bda74dbc6ab5d9b840d4 294 Gene3D G3DSA:1.10.10.10 3 88 3.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0467 7bf681f9da25bda74dbc6ab5d9b840d4 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 1.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0467 7bf681f9da25bda74dbc6ab5d9b840d4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 5.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0467 7bf681f9da25bda74dbc6ab5d9b840d4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 5.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0467 7bf681f9da25bda74dbc6ab5d9b840d4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 5.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 Gene3D G3DSA:3.30.9.10 119 357 1.2E-140 T 14-10-2018 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 418 526 8.7E-10 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 Gene3D G3DSA:1.10.8.870 429 500 3.5E-13 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 46 63 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 SUPERFAMILY SSF51905 40 359 1.0E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 Gene3D G3DSA:3.50.50.60 42 403 1.2E-140 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 70 82 4.5E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 350 356 4.5E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 4.5E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 54 64 4.5E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 115 127 4.5E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 384 396 4.5E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VS_II0113 1d182fdca1f7c2e3851e92999fb9d4bc 544 Pfam PF01266 FAD dependent oxidoreductase 42 360 5.3E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VS_II0178 c8d04a2a7e3700bd4f8ea0fd3aa90ae2 152 Pfam PF04314 Copper chaperone PCu(A)C 25 132 3.8E-39 T 14-10-2018 IPR007410 Copper chaperone PCuAC VS_II0178 c8d04a2a7e3700bd4f8ea0fd3aa90ae2 152 Gene3D G3DSA:2.60.40.1890 28 144 8.7E-41 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VS_II0178 c8d04a2a7e3700bd4f8ea0fd3aa90ae2 152 SUPERFAMILY SSF110087 3 141 2.09E-49 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VS_0661 8fcb97eb140d9d99cbcb70111ff2925b 212 SUPERFAMILY SSF53927 22 177 1.17E-55 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_0661 8fcb97eb140d9d99cbcb70111ff2925b 212 Pfam PF14437 MafB19-like deaminase 28 173 1.7E-31 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VS_0661 8fcb97eb140d9d99cbcb70111ff2925b 212 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 114 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VS_0661 8fcb97eb140d9d99cbcb70111ff2925b 212 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 32 173 44.337 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VS_0661 8fcb97eb140d9d99cbcb70111ff2925b 212 Gene3D G3DSA:3.40.140.10 21 186 7.8E-64 T 14-10-2018 VS_0147 2f9997fb1c43fd4815f50373d5d085b4 186 Pfam PF00293 NUDIX domain 49 158 4.3E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_0147 2f9997fb1c43fd4815f50373d5d085b4 186 ProSitePatterns PS00893 Nudix box signature. 83 104 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_0147 2f9997fb1c43fd4815f50373d5d085b4 186 SUPERFAMILY SSF55811 10 182 8.67E-41 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_0147 2f9997fb1c43fd4815f50373d5d085b4 186 Gene3D G3DSA:3.90.79.10 10 186 1.2E-49 T 14-10-2018 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 SUPERFAMILY SSF51445 432 1000 2.28E-126 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Pfam PF11852 Domain of unknown function (DUF3372) 942 1103 1.0E-62 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Gene3D G3DSA:2.60.40.1110 58 195 3.1E-30 T 14-10-2018 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 206 1105 0.0 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Gene3D G3DSA:2.60.40.1130 206 321 2.5E-30 T 14-10-2018 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 SUPERFAMILY SSF81296 334 437 1.92E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 SUPERFAMILY SSF81296 196 321 2.66E-30 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Gene3D G3DSA:2.60.40.1180 1035 1116 5.9E-24 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Gene3D G3DSA:3.20.20.80 435 1034 3.7E-215 T 14-10-2018 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 SUPERFAMILY SSF49452 42 196 6.21E-28 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 SMART SM00642 557 940 1.9E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Gene3D G3DSA:2.60.40.10 1117 1182 1.4E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 336 420 1.4E-14 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Gene3D G3DSA:2.60.40.10 328 434 6.1E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 SUPERFAMILY SSF81296 1127 1174 1.45E-5 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 Pfam PF03714 Bacterial pullanase-associated domain 75 196 2.5E-18 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VS_II0168 fffec8dad63f7a3e18205032f26cbb05 1237 SUPERFAMILY SSF51011 1003 1117 1.55E-38 T 14-10-2018 VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 Gene3D G3DSA:3.40.50.300 168 341 4.4E-41 T 14-10-2018 VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 SMART SM00490 219 324 2.1E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 SMART SM00487 2 176 1.3E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 Pfam PF00270 DEAD/DEAH box helicase 13 149 7.5E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 Gene3D G3DSA:1.20.120.1080 366 465 5.3E-7 T 14-10-2018 VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 Gene3D G3DSA:3.40.50.300 1 163 1.9E-43 T 14-10-2018 VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 Pfam PF00271 Helicase conserved C-terminal domain 200 323 2.8E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 Pfam PF04408 Helicase associated domain (HA2) 382 455 1.7E-5 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VS_1203 38722d659fd8bdb6f7bcb3614302266b 794 SUPERFAMILY SSF52540 19 335 8.1E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1351 da9e61e226051dc38c7b641e4a0e2838 470 SUPERFAMILY SSF48317 189 352 6.54E-11 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VS_1351 da9e61e226051dc38c7b641e4a0e2838 470 Pfam PF01569 PAP2 superfamily 235 349 9.4E-13 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VS_1351 da9e61e226051dc38c7b641e4a0e2838 470 ProSitePatterns PS00893 Nudix box signature. 58 79 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_1351 da9e61e226051dc38c7b641e4a0e2838 470 Gene3D G3DSA:3.90.79.10 29 176 2.9E-13 T 14-10-2018 VS_1351 da9e61e226051dc38c7b641e4a0e2838 470 Pfam PF00293 NUDIX domain 31 142 3.2E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_1351 da9e61e226051dc38c7b641e4a0e2838 470 SUPERFAMILY SSF55811 26 160 3.25E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_0697 493722eb4164cd8fe42c19153a09ed6a 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.2E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_0697 493722eb4164cd8fe42c19153a09ed6a 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 6.2E-107 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VS_0697 493722eb4164cd8fe42c19153a09ed6a 198 PIRSF PIRSF006102 1 198 4.2E-66 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_0697 493722eb4164cd8fe42c19153a09ed6a 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.782 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 SUPERFAMILY SSF68912 9 54 1.18E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VS_3071 2c366245ea44dc47b98be3243ff29be0 427 SUPERFAMILY SSF52540 98 379 1.75E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3071 2c366245ea44dc47b98be3243ff29be0 427 SMART SM00959 13 55 1.0E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 SMART SM00382 178 363 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_3071 2c366245ea44dc47b98be3243ff29be0 427 Pfam PF07498 Rho termination factor, N-terminal domain 13 55 3.8E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 Gene3D G3DSA:3.40.50.300 138 425 5.8E-133 T 14-10-2018 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 Gene3D G3DSA:2.40.50.140 56 125 2.3E-34 T 14-10-2018 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 SMART SM00357 60 126 4.2E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 168 371 2.8E-21 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 SUPERFAMILY SSF50249 56 133 1.66E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_3071 2c366245ea44dc47b98be3243ff29be0 427 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 427 248.276 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 TIGRFAM TIGR00767 rho: transcription termination factor Rho 10 425 7.4E-220 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 Pfam PF07497 Rho termination factor, RNA-binding domain 60 133 1.6E-31 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VS_3071 2c366245ea44dc47b98be3243ff29be0 427 Gene3D G3DSA:1.10.720.10 7 55 4.4E-22 T 14-10-2018 VS_0204 6d049cd71337c21511702f470ec9614f 277 SUPERFAMILY SSF51161 13 262 1.26E-61 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_0204 6d049cd71337c21511702f470ec9614f 277 Gene3D G3DSA:1.10.3130.10 5 146 3.1E-51 T 14-10-2018 VS_0204 6d049cd71337c21511702f470ec9614f 277 PIRSF PIRSF000441 12 87 400.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VS_0204 6d049cd71337c21511702f470ec9614f 277 PIRSF PIRSF000441 79 270 3.9E-55 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VS_0204 6d049cd71337c21511702f470ec9614f 277 Gene3D G3DSA:2.160.10.10 147 277 7.4E-37 T 14-10-2018 VS_0204 6d049cd71337c21511702f470ec9614f 277 Pfam PF06426 Serine acetyltransferase, N-terminal 13 116 5.7E-38 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VS_0204 6d049cd71337c21511702f470ec9614f 277 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 86 246 1.2E-73 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VS_0204 6d049cd71337c21511702f470ec9614f 277 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 206 234 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_0204 6d049cd71337c21511702f470ec9614f 277 SMART SM00971 13 117 8.7E-58 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VS_0204 6d049cd71337c21511702f470ec9614f 277 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 197 230 3.7E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VS_3002 04d957564e9d5a4836382f8ac0ac7f1a 213 Gene3D G3DSA:1.10.357.10 56 209 4.2E-33 T 14-10-2018 VS_3002 04d957564e9d5a4836382f8ac0ac7f1a 213 Gene3D G3DSA:1.10.10.60 5 55 3.5E-23 T 14-10-2018 VS_3002 04d957564e9d5a4836382f8ac0ac7f1a 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_3002 04d957564e9d5a4836382f8ac0ac7f1a 213 SUPERFAMILY SSF46689 4 80 1.65E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_3002 04d957564e9d5a4836382f8ac0ac7f1a 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VS_0830 853fd887eb9221a1db29aca15409a3fc 347 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VS_0830 853fd887eb9221a1db29aca15409a3fc 347 SUPERFAMILY SSF103039 4 230 6.54E-21 T 14-10-2018 IPR028976 CheC-like superfamily VS_0830 853fd887eb9221a1db29aca15409a3fc 347 Gene3D G3DSA:2.30.330.10 239 327 2.1E-5 T 14-10-2018 IPR036429 SpoA-like superfamily VS_0830 853fd887eb9221a1db29aca15409a3fc 347 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 1.4E-123 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VS_0830 853fd887eb9221a1db29aca15409a3fc 347 PIRSF PIRSF002888 1 328 8.8E-93 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VS_0830 853fd887eb9221a1db29aca15409a3fc 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 3.9E-18 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VS_0830 853fd887eb9221a1db29aca15409a3fc 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VS_0830 853fd887eb9221a1db29aca15409a3fc 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VS_0830 853fd887eb9221a1db29aca15409a3fc 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VS_0830 853fd887eb9221a1db29aca15409a3fc 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VS_0830 853fd887eb9221a1db29aca15409a3fc 347 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 14-10-2018 IPR028976 CheC-like superfamily VS_0830 853fd887eb9221a1db29aca15409a3fc 347 SUPERFAMILY SSF101801 247 322 3.66E-14 T 14-10-2018 IPR036429 SpoA-like superfamily VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 Pfam PF00271 Helicase conserved C-terminal domain 284 390 1.1E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 206 214 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 Pfam PF00270 DEAD/DEAH box helicase 72 249 1.1E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 SMART SM00490 309 390 7.6E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 Gene3D G3DSA:3.40.50.300 39 263 1.1E-74 T 14-10-2018 VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 Gene3D G3DSA:3.40.50.300 268 462 2.4E-46 T 14-10-2018 VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 SUPERFAMILY SSF52540 128 411 6.54E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0776 91c1e4d3fd9ad4e0f60d0423d1532f0b 468 SMART SM00487 67 273 6.7E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_2008 b549ca69c7e1ab43f9a414df1c69c88f 280 Gene3D G3DSA:1.20.1080.10 27 280 2.0E-95 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VS_2008 b549ca69c7e1ab43f9a414df1c69c88f 280 Pfam PF01226 Formate/nitrite transporter 13 275 5.5E-76 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VS_2008 b549ca69c7e1ab43f9a414df1c69c88f 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VS_2008 b549ca69c7e1ab43f9a414df1c69c88f 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 6.7E-115 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VS_2008 b549ca69c7e1ab43f9a414df1c69c88f 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.1E-78 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VS_3126 7c36a5219f08d3b928842b13411c96d2 206 SUPERFAMILY SSF56420 39 201 3.14E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily VS_3126 7c36a5219f08d3b928842b13411c96d2 206 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 40 195 5.1E-59 T 14-10-2018 IPR023635 Peptide deformylase VS_3126 7c36a5219f08d3b928842b13411c96d2 206 PRINTS PR01576 Peptide deformylase signature 125 136 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VS_3126 7c36a5219f08d3b928842b13411c96d2 206 PRINTS PR01576 Peptide deformylase signature 137 155 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VS_3126 7c36a5219f08d3b928842b13411c96d2 206 PRINTS PR01576 Peptide deformylase signature 69 98 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VS_3126 7c36a5219f08d3b928842b13411c96d2 206 PRINTS PR01576 Peptide deformylase signature 156 185 4.4E-37 T 14-10-2018 IPR023635 Peptide deformylase VS_3126 7c36a5219f08d3b928842b13411c96d2 206 Gene3D G3DSA:3.90.45.10 37 205 1.0E-65 T 14-10-2018 IPR036821 Peptide deformylase superfamily VS_3126 7c36a5219f08d3b928842b13411c96d2 206 PIRSF PIRSF004749 13 206 2.8E-55 T 14-10-2018 IPR023635 Peptide deformylase VS_3126 7c36a5219f08d3b928842b13411c96d2 206 Pfam PF01327 Polypeptide deformylase 40 188 1.5E-49 T 14-10-2018 IPR023635 Peptide deformylase VS_3126 7c36a5219f08d3b928842b13411c96d2 206 Hamap MF_00163 Peptide deformylase [def]. 38 198 30.351 T 14-10-2018 IPR023635 Peptide deformylase VS_0552 570571af842d83b9b08774349b845651 649 Gene3D G3DSA:1.25.20.10 33 394 9.0E-98 T 14-10-2018 VS_0552 570571af842d83b9b08774349b845651 649 SUPERFAMILY SSF53955 485 640 1.5E-46 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_0552 570571af842d83b9b08774349b845651 649 Pfam PF01464 Transglycosylase SLT domain 490 600 8.2E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VS_0552 570571af842d83b9b08774349b845651 649 Gene3D G3DSA:1.10.530.10 479 649 8.3E-49 T 14-10-2018 VS_0552 570571af842d83b9b08774349b845651 649 Gene3D G3DSA:1.10.1240.20 412 477 1.7E-19 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VS_0552 570571af842d83b9b08774349b845651 649 Pfam PF14718 Soluble lytic murein transglycosylase L domain 413 477 1.4E-20 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VS_0552 570571af842d83b9b08774349b845651 649 SUPERFAMILY SSF48435 34 482 6.8E-125 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 SUPERFAMILY SSF53223 25 176 9.35E-52 T 14-10-2018 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 SMART SM00919 178 414 2.8E-139 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 SUPERFAMILY SSF51735 178 423 7.04E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2896 264ca832d915a32c8dd7d5538f596f05 429 SMART SM01274 33 166 1.7E-74 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 Gene3D G3DSA:3.40.50.10380 12 175 3.5E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 Gene3D G3DSA:3.40.50.720 176 429 6.7E-83 T 14-10-2018 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 Pfam PF03949 Malic enzyme, NAD binding domain 180 374 4.5E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 Pfam PF00390 Malic enzyme, N-terminal domain 35 129 2.2E-20 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 ProSitePatterns PS00331 Malic enzymes signature. 174 190 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VS_2896 264ca832d915a32c8dd7d5538f596f05 429 PIRSF PIRSF000106 58 429 1.8E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 Pfam PF00158 Sigma-54 interaction domain 136 303 3.9E-73 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 2.2E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 2.2E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 Pfam PF06490 Flagellar regulatory protein FleQ 6 113 6.2E-32 T 14-10-2018 IPR010518 Flagellar regulatory FleQ VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 SUPERFAMILY SSF46689 348 485 9.41E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 Gene3D G3DSA:3.40.50.300 125 307 3.7E-66 T 14-10-2018 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 SUPERFAMILY SSF52540 136 377 5.65E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 Gene3D G3DSA:1.10.8.60 308 403 7.4E-24 T 14-10-2018 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 SUPERFAMILY SSF52172 6 181 6.34E-6 T 14-10-2018 IPR011006 CheY-like superfamily VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 Pfam PF02954 Bacterial regulatory protein, Fis family 443 483 1.1E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 Gene3D G3DSA:3.40.50.2300 1 115 1.4E-13 T 14-10-2018 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 Gene3D G3DSA:1.10.10.60 418 487 7.9E-13 T 14-10-2018 VS_0819 fc3732861b8bc8da1d446cdf47d74eb4 487 SMART SM00382 156 300 3.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2471 09868522b983680f25b5963aa1ba1ae1 189 SUPERFAMILY SSF55718 47 154 3.53E-21 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_2471 09868522b983680f25b5963aa1ba1ae1 189 Gene3D G3DSA:3.30.1050.10 43 154 3.4E-7 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_2471 09868522b983680f25b5963aa1ba1ae1 189 Pfam PF02036 SCP-2 sterol transfer family 50 148 3.1E-19 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VS_2471 09868522b983680f25b5963aa1ba1ae1 189 PIRSF PIRSF025550 15 188 1.5E-83 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 SMART SM01240 7 344 8.4E-137 T 14-10-2018 VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.759 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.2E-81 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 SUPERFAMILY SSF51412 6 336 5.89E-100 T 14-10-2018 VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 PIRSF PIRSF000235 1 347 5.8E-193 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 5.8E-183 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VS_II1110 fac47e2a9a0794ad352bdfdba6a6ab71 347 Gene3D G3DSA:3.20.20.70 1 345 4.2E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 SUPERFAMILY SSF50331 237 359 2.67E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 Gene3D G3DSA:2.40.50.100 239 359 1.6E-13 T 14-10-2018 VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 SMART SM00382 28 210 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 Pfam PF00005 ABC transporter 20 161 2.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 Gene3D G3DSA:3.40.50.300 1 238 1.1E-76 T 14-10-2018 VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 Gene3D G3DSA:2.40.50.140 283 346 1.6E-13 T 14-10-2018 VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 SUPERFAMILY SSF52540 4 243 3.65E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1387 8938296b07b2121c9ab3502bfe22d41e 363 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1627 75c1a9a3e602720727a8b25c2557f521 190 SUPERFAMILY SSF56925 25 190 4.19E-25 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_1627 75c1a9a3e602720727a8b25c2557f521 190 Pfam PF13505 Outer membrane protein beta-barrel domain 10 190 1.0E-23 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VS_1627 75c1a9a3e602720727a8b25c2557f521 190 Gene3D G3DSA:2.40.160.20 23 190 5.4E-23 T 14-10-2018 VS_3141 68d74aebe1f6ab7db42f6fb37ed74015 317 PIRSF PIRSF028696 1 317 1.5E-107 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VS_3141 68d74aebe1f6ab7db42f6fb37ed74015 317 Pfam PF11059 Protein of unknown function (DUF2860) 26 316 3.0E-119 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VS_0338 b2f62ece5ec7aae5d0acc00466c55e73 240 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 5.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0338 b2f62ece5ec7aae5d0acc00466c55e73 240 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 4.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0338 b2f62ece5ec7aae5d0acc00466c55e73 240 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 3.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 3.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 3.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 3.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 3.2E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 Gene3D G3DSA:3.90.226.10 5 207 7.3E-85 T 14-10-2018 VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 Pfam PF00574 Clp protease 25 205 4.1E-90 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 SUPERFAMILY SSF52096 23 206 7.46E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 5.7E-108 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site VS_2205 873d1ec5ea28153a2b69d8bf74311c55 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.501 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 Gene3D G3DSA:3.20.20.140 1 255 1.4E-100 T 14-10-2018 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.9E-94 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 Pfam PF01026 TatD related DNase 3 253 5.1E-79 T 14-10-2018 IPR001130 TatD family GO:0016788 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 PIRSF PIRSF005902 1 255 4.3E-81 T 14-10-2018 IPR001130 TatD family GO:0016788 VS_1031 b6ce24c11edc14d13f4b0d05a5d25040 255 SUPERFAMILY SSF51556 1 253 3.12E-88 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_1800 409c99e654c926ccac063f2c8899236b 565 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 2.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1800 409c99e654c926ccac063f2c8899236b 565 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 2.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1800 409c99e654c926ccac063f2c8899236b 565 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 2.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1800 409c99e654c926ccac063f2c8899236b 565 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 2.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1800 409c99e654c926ccac063f2c8899236b 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.7E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1800 409c99e654c926ccac063f2c8899236b 565 SUPERFAMILY SSF55874 258 429 1.23E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1800 409c99e654c926ccac063f2c8899236b 565 SMART SM00387 316 427 1.7E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1800 409c99e654c926ccac063f2c8899236b 565 SUPERFAMILY SSF47384 193 269 1.79E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1800 409c99e654c926ccac063f2c8899236b 565 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 4.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1800 409c99e654c926ccac063f2c8899236b 565 Gene3D G3DSA:3.30.565.10 268 433 9.1E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1800 409c99e654c926ccac063f2c8899236b 565 SMART SM00448 450 561 1.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1800 409c99e654c926ccac063f2c8899236b 565 Pfam PF00072 Response regulator receiver domain 452 561 6.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1800 409c99e654c926ccac063f2c8899236b 565 SUPERFAMILY SSF52172 450 564 4.41E-34 T 14-10-2018 IPR011006 CheY-like superfamily VS_1800 409c99e654c926ccac063f2c8899236b 565 Gene3D G3DSA:3.40.50.12740 450 564 1.5E-36 T 14-10-2018 VS_1800 409c99e654c926ccac063f2c8899236b 565 SMART SM00388 204 269 9.6E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1800 409c99e654c926ccac063f2c8899236b 565 Gene3D G3DSA:1.10.287.130 181 267 6.4E-22 T 14-10-2018 VS_2321 50b05e908f3fe04a79c97d61cc72c0c6 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.35 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VS_2321 50b05e908f3fe04a79c97d61cc72c0c6 191 Pfam PF13580 SIS domain 13 146 1.8E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_2321 50b05e908f3fe04a79c97d61cc72c0c6 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 9.4E-81 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VS_2321 50b05e908f3fe04a79c97d61cc72c0c6 191 SUPERFAMILY SSF53697 1 189 1.29E-50 T 14-10-2018 VS_2321 50b05e908f3fe04a79c97d61cc72c0c6 191 Gene3D G3DSA:3.40.50.10490 1 191 2.5E-70 T 14-10-2018 VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 338 183.195 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 SMART SM00382 56 189 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 Gene3D G3DSA:1.10.8.60 187 260 6.9E-31 T 14-10-2018 VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 SUPERFAMILY SSF46785 262 335 7.71E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 2.2E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.0E-116 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 SUPERFAMILY SSF52540 25 256 1.9E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 3.8E-147 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 Gene3D G3DSA:1.10.10.10 262 338 8.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 Gene3D G3DSA:3.40.50.300 25 186 3.6E-40 T 14-10-2018 VS_1108 d646ed56cfc37fa94c9299ef105f0f48 338 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 4.0E-38 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VS_1495 fcc8116a6dcb5d55b2a52207a332812f 781 SUPERFAMILY SSF52540 457 630 1.56E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1495 fcc8116a6dcb5d55b2a52207a332812f 781 Gene3D G3DSA:3.40.50.300 456 598 8.9E-10 T 14-10-2018 VS_1495 fcc8116a6dcb5d55b2a52207a332812f 781 Pfam PF13401 AAA domain 471 582 5.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0423 f062ee911cf47360470afb87bdead915 626 Gene3D G3DSA:3.40.50.670 390 621 1.1E-92 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0423 f062ee911cf47360470afb87bdead915 626 SMART SM00433 34 622 2.8E-211 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0423 f062ee911cf47360470afb87bdead915 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 171 1.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0423 f062ee911cf47360470afb87bdead915 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.508 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 SUPERFAMILY SSF54211 217 382 6.83E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0423 f062ee911cf47360470afb87bdead915 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.7E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 4.2E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VS_0423 f062ee911cf47360470afb87bdead915 626 SUPERFAMILY SSF56719 388 619 6.28E-79 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VS_0423 f062ee911cf47360470afb87bdead915 626 Pfam PF00204 DNA gyrase B 218 384 1.3E-41 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0423 f062ee911cf47360470afb87bdead915 626 Gene3D G3DSA:3.30.230.10 216 389 5.2E-57 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_0423 f062ee911cf47360470afb87bdead915 626 Pfam PF01751 Toprim domain 413 521 9.2E-12 T 14-10-2018 IPR006171 TOPRIM domain VS_0423 f062ee911cf47360470afb87bdead915 626 SMART SM00387 27 173 1.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0423 f062ee911cf47360470afb87bdead915 626 Gene3D G3DSA:3.30.565.10 2 215 1.5E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0423 f062ee911cf47360470afb87bdead915 626 SUPERFAMILY SSF55874 4 215 1.06E-65 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 6.3E-58 T 14-10-2018 VS_0423 f062ee911cf47360470afb87bdead915 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 6.3E-58 T 14-10-2018 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 Gene3D G3DSA:3.40.50.300 5 239 9.1E-72 T 14-10-2018 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.144 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 Gene3D G3DSA:2.40.30.10 240 327 1.6E-26 T 14-10-2018 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 SUPERFAMILY SSF50465 332 434 3.5E-28 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 3.1E-197 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 Gene3D G3DSA:2.40.30.10 331 433 1.8E-27 T 14-10-2018 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 210 3.6E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 SUPERFAMILY SSF50447 243 324 1.59E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 Pfam PF00009 Elongation factor Tu GTP binding domain 25 226 3.8E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2788 a1f1e6cadc5a97af9166c2edaf199d6a 476 SUPERFAMILY SSF52540 19 236 8.05E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 SUPERFAMILY SSF103025 20 297 1.88E-89 T 14-10-2018 VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 SUPERFAMILY SSF101790 294 387 5.4E-26 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 Pfam PF01571 Aminomethyltransferase folate-binding domain 26 270 4.2E-87 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 Gene3D G3DSA:3.30.1360.120 25 247 6.3E-84 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 Gene3D G3DSA:4.10.1250.10 249 297 5.7E-20 T 14-10-2018 VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 PIRSF PIRSF006487 2 388 2.1E-82 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 22 382 1.6E-105 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 284 378 1.8E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 Gene3D G3DSA:2.40.30.110 300 377 5.2E-28 T 14-10-2018 VS_II0816 29adb3df4c19ecab3dd67d2543b81d88 388 Gene3D G3DSA:3.30.70.1400 72 156 6.3E-84 T 14-10-2018 VS_0181 0cf19f10034af561ee9cd01a71c7e0e4 413 SUPERFAMILY SSF102645 196 411 7.32E-80 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VS_0181 0cf19f10034af561ee9cd01a71c7e0e4 413 Gene3D G3DSA:3.40.50.10300 198 413 5.7E-85 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VS_0181 0cf19f10034af561ee9cd01a71c7e0e4 413 Gene3D G3DSA:3.40.50.1950 12 197 1.4E-56 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VS_0181 0cf19f10034af561ee9cd01a71c7e0e4 413 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 198 382 1.7E-77 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VS_0181 0cf19f10034af561ee9cd01a71c7e0e4 413 Pfam PF02441 Flavoprotein 19 191 6.2E-45 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VS_0181 0cf19f10034af561ee9cd01a71c7e0e4 413 SUPERFAMILY SSF52507 16 194 3.14E-61 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VS_0181 0cf19f10034af561ee9cd01a71c7e0e4 413 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 16 407 1.8E-153 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 VS_0413 e1fd783d984de6ca9dac52f89b332ee0 505 Gene3D G3DSA:1.40.20.10 211 408 2.7E-13 T 14-10-2018 IPR038186 CHAD domain superfamily VS_0413 e1fd783d984de6ca9dac52f89b332ee0 505 SUPERFAMILY SSF55154 1 216 6.05E-52 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VS_0413 e1fd783d984de6ca9dac52f89b332ee0 505 SMART SM00880 229 497 3.8E-25 T 14-10-2018 IPR007899 CHAD domain VS_0413 e1fd783d984de6ca9dac52f89b332ee0 505 Pfam PF05235 CHAD domain 231 395 1.3E-8 T 14-10-2018 IPR007899 CHAD domain VS_0413 e1fd783d984de6ca9dac52f89b332ee0 505 SMART SM01118 2 203 3.7E-42 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VS_0413 e1fd783d984de6ca9dac52f89b332ee0 505 Pfam PF01928 CYTH domain 3 197 7.6E-34 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VS_0413 e1fd783d984de6ca9dac52f89b332ee0 505 Gene3D G3DSA:2.40.320.10 1 200 9.7E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 9.5E-37 T 14-10-2018 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 SUPERFAMILY SSF118215 5 406 1.57E-105 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 4.0E-115 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VS_0650 3e51f26f9b6bd85f45b6b6380b2908ec 424 Gene3D G3DSA:1.10.3860.10 1 422 1.1E-113 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 SUPERFAMILY SSF55073 156 314 2.43E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 Gene3D G3DSA:3.40.50.2300 2 140 1.1E-34 T 14-10-2018 VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 SMART SM00448 8 120 1.8E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 312 1.0E-43 T 14-10-2018 IPR000160 GGDEF domain VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 SUPERFAMILY SSF52172 6 161 4.13E-38 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 Pfam PF00072 Response regulator receiver domain 10 119 4.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 SMART SM00267 140 316 3.3E-55 T 14-10-2018 IPR000160 GGDEF domain VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 314 2.4E-46 T 14-10-2018 IPR000160 GGDEF domain VS_II0727 0504d2bc595eceb10d49eb3d17eed950 323 Gene3D G3DSA:3.30.70.270 141 314 1.3E-50 T 14-10-2018 VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 Gene3D G3DSA:3.30.450.330 248 572 1.9E-107 T 14-10-2018 VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 SUPERFAMILY SSF56519 75 246 7.72E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 SUPERFAMILY SSF56601 247 576 5.31E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 Pfam PF03717 Penicillin-binding Protein dimerisation domain 79 233 2.2E-20 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 568 5.5E-77 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 31 583 44.844 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 Gene3D G3DSA:3.90.1310.30 71 246 1.5E-43 T 14-10-2018 VS_0444 818d43acfd2ef3faf446fce8b0499d23 585 Gene3D G3DSA:3.40.710.10 308 490 1.9E-107 T 14-10-2018 VS_1104 954182aae78a11929c4b9dfdf096138a 592 Gene3D G3DSA:2.40.50.140 1 106 4.2E-33 T 14-10-2018 VS_1104 954182aae78a11929c4b9dfdf096138a 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 32.929 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VS_1104 954182aae78a11929c4b9dfdf096138a 592 SUPERFAMILY SSF55681 108 582 1.17E-97 T 14-10-2018 VS_1104 954182aae78a11929c4b9dfdf096138a 592 SUPERFAMILY SSF50249 1 105 4.19E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1104 954182aae78a11929c4b9dfdf096138a 592 Pfam PF02938 GAD domain 307 406 4.5E-29 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VS_1104 954182aae78a11929c4b9dfdf096138a 592 Gene3D G3DSA:3.30.1360.30 271 420 5.6E-194 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VS_1104 954182aae78a11929c4b9dfdf096138a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1104 954182aae78a11929c4b9dfdf096138a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1104 954182aae78a11929c4b9dfdf096138a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1104 954182aae78a11929c4b9dfdf096138a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.0E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1104 954182aae78a11929c4b9dfdf096138a 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.4E-103 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1104 954182aae78a11929c4b9dfdf096138a 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 2.8E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VS_1104 954182aae78a11929c4b9dfdf096138a 592 SUPERFAMILY SSF55261 288 419 1.44E-45 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VS_1104 954182aae78a11929c4b9dfdf096138a 592 Gene3D G3DSA:3.30.930.10 118 578 5.6E-194 T 14-10-2018 VS_1104 954182aae78a11929c4b9dfdf096138a 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 2.5E-260 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VS_2204 874679ff504386c77b8764e72f139e99 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.224 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VS_2204 874679ff504386c77b8764e72f139e99 426 SMART SM00382 113 266 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2204 874679ff504386c77b8764e72f139e99 426 SMART SM00994 13 52 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VS_2204 874679ff504386c77b8764e72f139e99 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 14-10-2018 VS_2204 874679ff504386c77b8764e72f139e99 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.1E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_2204 874679ff504386c77b8764e72f139e99 426 SMART SM01086 319 414 2.2E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_2204 874679ff504386c77b8764e72f139e99 426 Gene3D G3DSA:1.10.8.60 318 426 3.9E-41 T 14-10-2018 VS_2204 874679ff504386c77b8764e72f139e99 426 SUPERFAMILY SSF52540 63 404 1.21E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2204 874679ff504386c77b8764e72f139e99 426 Gene3D G3DSA:3.40.50.300 59 317 1.1E-108 T 14-10-2018 VS_2204 874679ff504386c77b8764e72f139e99 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VS_2204 874679ff504386c77b8764e72f139e99 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 6.5E-209 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VS_2204 874679ff504386c77b8764e72f139e99 426 Gene3D G3DSA:3.30.50.30 2 53 1.5E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VS_2204 874679ff504386c77b8764e72f139e99 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 6.7E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_0652 530a0d261dba919ff1400acc39aa1780 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.8E-138 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VS_0652 530a0d261dba919ff1400acc39aa1780 381 Pfam PF01556 DnaJ C terminal domain 123 335 8.5E-46 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal VS_0652 530a0d261dba919ff1400acc39aa1780 381 SUPERFAMILY SSF57938 136 212 5.23E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VS_0652 530a0d261dba919ff1400acc39aa1780 381 SUPERFAMILY SSF49493 116 263 4.19E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VS_0652 530a0d261dba919ff1400acc39aa1780 381 PRINTS PR00625 DnaJ domain signature 25 40 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain VS_0652 530a0d261dba919ff1400acc39aa1780 381 PRINTS PR00625 DnaJ domain signature 62 81 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain VS_0652 530a0d261dba919ff1400acc39aa1780 381 PRINTS PR00625 DnaJ domain signature 7 25 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain VS_0652 530a0d261dba919ff1400acc39aa1780 381 PRINTS PR00625 DnaJ domain signature 42 62 2.5E-31 T 14-10-2018 IPR001623 DnaJ domain VS_0652 530a0d261dba919ff1400acc39aa1780 381 SUPERFAMILY SSF46565 1 110 1.57E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_0652 530a0d261dba919ff1400acc39aa1780 381 SMART SM00271 4 62 1.3E-29 T 14-10-2018 IPR001623 DnaJ domain VS_0652 530a0d261dba919ff1400acc39aa1780 381 SUPERFAMILY SSF49493 261 346 4.97E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VS_0652 530a0d261dba919ff1400acc39aa1780 381 Gene3D G3DSA:2.60.260.20 257 365 1.8E-29 T 14-10-2018 VS_0652 530a0d261dba919ff1400acc39aa1780 381 Pfam PF00226 DnaJ domain 5 67 7.8E-26 T 14-10-2018 IPR001623 DnaJ domain VS_0652 530a0d261dba919ff1400acc39aa1780 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site VS_0652 530a0d261dba919ff1400acc39aa1780 381 Pfam PF00684 DnaJ central domain 149 209 1.5E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VS_0652 530a0d261dba919ff1400acc39aa1780 381 Gene3D G3DSA:1.10.287.110 1 114 1.1E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_0652 530a0d261dba919ff1400acc39aa1780 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.516 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VS_0652 530a0d261dba919ff1400acc39aa1780 381 Gene3D G3DSA:2.10.230.10 138 211 4.4E-25 T 14-10-2018 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 6.7E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 6.7E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 6.7E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 6.7E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 6.7E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 Pfam PF12404 Peptidase 5 81 2.5E-31 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 4.6E-103 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 Hamap MF_00504 Peptidase B [pepB]. 3 428 64.635 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 SUPERFAMILY SSF53187 105 428 4.71E-101 T 14-10-2018 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 PIRSF PIRSF036388 1 431 7.1E-219 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VS_0614 b6c60b0399d5cd7f06335a7dc0962d39 431 Gene3D G3DSA:3.40.630.10 91 431 1.5E-106 T 14-10-2018 VS_0198 06ce13f8a88f94f4c84b060bf4083965 224 Gene3D G3DSA:2.160.10.10 5 223 5.1E-53 T 14-10-2018 VS_0198 06ce13f8a88f94f4c84b060bf4083965 224 SUPERFAMILY SSF51161 53 211 1.22E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_0198 06ce13f8a88f94f4c84b060bf4083965 224 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_0198 06ce13f8a88f94f4c84b060bf4083965 224 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 7.2E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VS_0198 06ce13f8a88f94f4c84b060bf4083965 224 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 51 81 0.0012 T 14-10-2018 IPR001451 Hexapeptide repeat VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 Gene3D G3DSA:3.40.50.2300 1 119 1.9E-28 T 14-10-2018 VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 SUPERFAMILY SSF52172 4 173 3.27E-27 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 SMART SM00448 3 111 4.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 SUPERFAMILY SSF46894 123 217 9.35E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 SMART SM00862 146 217 2.2E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 Pfam PF00072 Response regulator receiver domain 6 112 1.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 1.6E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0736 012435e7a6e46f1c0d55e4464e731006 219 Gene3D G3DSA:1.10.10.10 126 219 3.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0671 3e70fc7138eb26af88898fb30b90d688 298 SUPERFAMILY SSF53850 89 295 1.08E-35 T 14-10-2018 VS_0671 3e70fc7138eb26af88898fb30b90d688 298 Gene3D G3DSA:3.40.190.290 93 297 1.2E-33 T 14-10-2018 VS_0671 3e70fc7138eb26af88898fb30b90d688 298 SUPERFAMILY SSF46785 3 78 1.36E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0671 3e70fc7138eb26af88898fb30b90d688 298 Gene3D G3DSA:1.10.10.10 3 87 6.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0671 3e70fc7138eb26af88898fb30b90d688 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0671 3e70fc7138eb26af88898fb30b90d688 298 Pfam PF03466 LysR substrate binding domain 89 293 1.9E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0413 33714c9f93a3a3272339adf5b9fde323 507 Gene3D G3DSA:1.20.1250.20 22 490 3.7E-65 T 14-10-2018 VS_II0413 33714c9f93a3a3272339adf5b9fde323 507 SUPERFAMILY SSF103473 18 489 3.4E-23 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II0413 33714c9f93a3a3272339adf5b9fde323 507 Pfam PF00854 POT family 113 446 6.9E-16 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VS_II0943 6a45b2b4acbb59961b0b2a02995ea654 292 Gene3D G3DSA:3.40.50.2300 125 259 4.3E-96 T 14-10-2018 VS_II0943 6a45b2b4acbb59961b0b2a02995ea654 292 Gene3D G3DSA:3.40.50.2300 32 278 4.3E-96 T 14-10-2018 VS_II0943 6a45b2b4acbb59961b0b2a02995ea654 292 Pfam PF13407 Periplasmic binding protein domain 28 277 2.2E-59 T 14-10-2018 IPR025997 Periplasmic binding protein VS_II0943 6a45b2b4acbb59961b0b2a02995ea654 292 SUPERFAMILY SSF53822 8 290 1.8E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II0108 567e70598417ea7780c510c036f711f6 240 SUPERFAMILY SSF55469 1 238 2.88E-73 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_II0108 567e70598417ea7780c510c036f711f6 240 PIRSF PIRSF005426 1 240 4.2E-84 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VS_II0108 567e70598417ea7780c510c036f711f6 240 Pfam PF00881 Nitroreductase family 8 159 1.7E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VS_II0108 567e70598417ea7780c510c036f711f6 240 Gene3D G3DSA:3.40.109.10 1 240 9.9E-77 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 SUPERFAMILY SSF53901 1 251 8.93E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 Gene3D G3DSA:3.40.47.10 1 253 8.4E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 SUPERFAMILY SSF53901 213 401 1.89E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.2E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 Gene3D G3DSA:3.40.47.10 258 401 5.6E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.4E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VS_0898 e5b6ea6e2f6bb942dd716f887f594f46 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.1E-44 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_0814 3361d5a081e72f03775d69ab2b577200 392 Pfam PF00700 Bacterial flagellin C-terminal helical region 307 391 5.6E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_0814 3361d5a081e72f03775d69ab2b577200 392 Gene3D G3DSA:1.10.8.410 344 391 1.9E-20 T 14-10-2018 VS_0814 3361d5a081e72f03775d69ab2b577200 392 SUPERFAMILY SSF64518 1 391 9.02E-95 T 14-10-2018 VS_0814 3361d5a081e72f03775d69ab2b577200 392 Gene3D G3DSA:1.20.1330.10 195 343 6.5E-18 T 14-10-2018 VS_0814 3361d5a081e72f03775d69ab2b577200 392 PRINTS PR00207 Flagellin signature 37 54 2.1E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0814 3361d5a081e72f03775d69ab2b577200 392 PRINTS PR00207 Flagellin signature 76 95 2.1E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0814 3361d5a081e72f03775d69ab2b577200 392 PRINTS PR00207 Flagellin signature 111 134 2.1E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0814 3361d5a081e72f03775d69ab2b577200 392 Pfam PF07196 Flagellin hook IN motif 194 247 3.2E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VS_0814 3361d5a081e72f03775d69ab2b577200 392 Gene3D G3DSA:1.20.58.1830 5 33 1.8E-71 T 14-10-2018 VS_0814 3361d5a081e72f03775d69ab2b577200 392 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_0814 3361d5a081e72f03775d69ab2b577200 392 Gene3D G3DSA:1.20.1330.10 45 179 1.8E-71 T 14-10-2018 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 PRINTS PR00690 Adhesin family signature 233 251 1.3E-8 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 PRINTS PR00690 Adhesin family signature 180 201 1.3E-8 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 PRINTS PR00690 Adhesin family signature 64 81 1.3E-8 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 PRINTS PR00690 Adhesin family signature 51 64 1.3E-8 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 Gene3D G3DSA:3.40.50.1980 22 180 6.6E-43 T 14-10-2018 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 SUPERFAMILY SSF53807 19 292 2.01E-72 T 14-10-2018 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 Gene3D G3DSA:3.40.50.1980 181 294 1.2E-39 T 14-10-2018 VS_2237 3e3f90e12d59a1670acde601ecc33846 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 289 7.2E-54 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 SUPERFAMILY SSF82693 139 328 1.36E-15 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 SUPERFAMILY SSF82866 297 495 9.29E-33 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 SUPERFAMILY SSF82866 785 1007 3.27E-44 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.4E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.4E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.4E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.4E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 SUPERFAMILY SSF82693 550 600 7.06E-7 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 SUPERFAMILY SSF82714 185 271 3.14E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 SUPERFAMILY SSF82693 41 134 1.45E-15 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:3.30.2090.10 180 274 5.6E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:3.30.70.1440 650 846 5.6E-226 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:3.30.70.1320 137 332 5.6E-226 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:1.20.1640.10 506 998 5.6E-226 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:3.30.70.1430 551 649 5.6E-226 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 SUPERFAMILY SSF82714 707 781 1.12E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:1.20.1640.10 11 505 5.6E-226 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Pfam PF00873 AcrB/AcrD/AcrF family 5 1001 6.1E-148 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:3.30.70.1430 41 796 5.6E-226 T 14-10-2018 VS_1540 e377ad7fc55f060cd500ca5a1f5c252d 1040 Gene3D G3DSA:3.30.2090.10 701 788 5.6E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1089 eae0f860d3a163174681f10759370b90 215 SUPERFAMILY SSF89155 8 212 1.29E-50 T 14-10-2018 IPR036411 TorD-like superfamily VS_1089 eae0f860d3a163174681f10759370b90 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 33.622 T 14-10-2018 IPR023069 Chaperone TorD VS_1089 eae0f860d3a163174681f10759370b90 215 Gene3D G3DSA:1.20.1280.20 129 214 2.1E-22 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_1089 eae0f860d3a163174681f10759370b90 215 Gene3D G3DSA:1.20.120.1820 2 126 7.3E-39 T 14-10-2018 VS_1089 eae0f860d3a163174681f10759370b90 215 Pfam PF02613 Nitrate reductase delta subunit 52 181 4.2E-37 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VS_1117 453feadbac6030496869181672bff0f8 180 Gene3D G3DSA:3.30.1330.60 55 180 3.1E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1117 453feadbac6030496869181672bff0f8 180 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 77 180 8.9E-44 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 VS_1117 453feadbac6030496869181672bff0f8 180 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 180 30.293 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VS_1117 453feadbac6030496869181672bff0f8 180 ProSitePatterns PS01068 OmpA-like domain. 112 156 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VS_1117 453feadbac6030496869181672bff0f8 180 SUPERFAMILY SSF103088 67 179 5.62E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1117 453feadbac6030496869181672bff0f8 180 Pfam PF00691 OmpA family 79 174 1.2E-21 T 14-10-2018 IPR006665 OmpA-like domain VS_1117 453feadbac6030496869181672bff0f8 180 PRINTS PR01021 OMPA domain signature 125 141 2.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1117 453feadbac6030496869181672bff0f8 180 PRINTS PR01021 OMPA domain signature 80 102 2.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1117 453feadbac6030496869181672bff0f8 180 PRINTS PR01021 OMPA domain signature 110 125 2.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.501 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 6.9E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 SUPERFAMILY SSF54211 1 181 1.16E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.1E-112 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 SUPERFAMILY SSF55666 153 237 1.44E-26 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 3.1E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_0177 96885fc7d4fe193e589ccb35926dd7a3 238 Gene3D G3DSA:3.30.230.70 10 238 5.1E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 776 35.704 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 775 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 Gene3D G3DSA:3.20.20.210 7 542 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 SUPERFAMILY SSF51726 5 410 1.83E-104 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 Gene3D G3DSA:3.20.20.210 407 774 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 333 1.8E-117 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 PIRSF PIRSF000382 2 781 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 449 771 1.6E-148 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VS_1145 30151ea0c53a68bc78b1c9e647f516b0 782 SUPERFAMILY SSF51726 414 776 2.22E-113 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_1455 c2a9887c77eb71431013adc0085455fc 460 SUPERFAMILY SSF46689 18 123 1.97E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1455 c2a9887c77eb71431013adc0085455fc 460 Gene3D G3DSA:3.30.420.10 138 328 1.1E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1455 c2a9887c77eb71431013adc0085455fc 460 SUPERFAMILY SSF53098 140 301 2.85E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2444 d8a9554c4d909c6f5da849c319b7df1c 279 SUPERFAMILY SSF51269 77 132 1.82E-5 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 VS_2444 d8a9554c4d909c6f5da849c319b7df1c 279 Pfam PF08666 SAF domain 75 132 3.3E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VS_2444 d8a9554c4d909c6f5da849c319b7df1c 279 SMART SM00858 74 136 1.1E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VS_2444 d8a9554c4d909c6f5da849c319b7df1c 279 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 143 245 1.0E-28 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VS_2444 d8a9554c4d909c6f5da849c319b7df1c 279 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 38 257 1.9E-71 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB VS_2444 d8a9554c4d909c6f5da849c319b7df1c 279 Gene3D G3DSA:3.90.1210.10 72 138 2.3E-7 T 14-10-2018 VS_II0052 023aa0b4e88b0129568a5ac0e60c3075 347 Gene3D G3DSA:3.40.190.170 20 323 3.2E-85 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VS_II0052 023aa0b4e88b0129568a5ac0e60c3075 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 25 308 6.0E-64 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VS_3154 411149c527c4df674dab7a2855d88494 523 SUPERFAMILY SSF52540 106 391 6.98E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3154 411149c527c4df674dab7a2855d88494 523 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 376 385 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3154 411149c527c4df674dab7a2855d88494 523 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 38 102 3.6E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3154 411149c527c4df674dab7a2855d88494 523 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 385 7.8E-71 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3154 411149c527c4df674dab7a2855d88494 523 Gene3D G3DSA:3.40.50.300 104 392 1.1E-128 T 14-10-2018 VS_3154 411149c527c4df674dab7a2855d88494 523 SUPERFAMILY SSF47917 393 521 7.06E-46 T 14-10-2018 VS_3154 411149c527c4df674dab7a2855d88494 523 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 11 522 49.323 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3154 411149c527c4df674dab7a2855d88494 523 SUPERFAMILY SSF50615 20 104 1.18E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3154 411149c527c4df674dab7a2855d88494 523 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 12 522 1.4E-248 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3154 411149c527c4df674dab7a2855d88494 523 Gene3D G3DSA:2.40.30.20 11 103 4.5E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3154 411149c527c4df674dab7a2855d88494 523 Gene3D G3DSA:1.20.150.20 393 523 8.0E-49 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3154 411149c527c4df674dab7a2855d88494 523 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 392 517 1.5E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 SUPERFAMILY SSF109604 857 969 2.01E-7 T 14-10-2018 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 Gene3D G3DSA:3.30.450.20 130 221 3.1E-10 T 14-10-2018 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 Gene3D G3DSA:3.30.450.20 222 294 3.1E-10 T 14-10-2018 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 Gene3D G3DSA:1.20.1480.50 353 450 2.4E-6 T 14-10-2018 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 Pfam PF13487 HD domain 857 920 6.3E-21 T 14-10-2018 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 Gene3D G3DSA:1.10.3210.10 595 721 5.6E-20 T 14-10-2018 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 Gene3D G3DSA:1.10.3210.10 849 981 3.8E-29 T 14-10-2018 VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 SMART SM00471 616 940 0.0015 T 14-10-2018 IPR003607 HD/PDEase domain VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 SUPERFAMILY SSF103190 166 232 2.59E-6 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II0428 58d8c09ae01134da597ae6cae7acb55f 1007 SUPERFAMILY SSF109604 613 770 5.34E-7 T 14-10-2018 VS_II0807 4b70f37a8089afa7394c332193eff28b 158 Pfam PF05981 CreA protein 22 144 1.6E-44 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VS_II0807 4b70f37a8089afa7394c332193eff28b 158 PIRSF PIRSF003174 1 153 3.8E-49 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VS_1504 c371cb834fa770751821dcebece1d860 715 Pfam PF13181 Tetratricopeptide repeat 127 151 0.0018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 SUPERFAMILY SSF55073 542 704 6.28E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1504 c371cb834fa770751821dcebece1d860 715 Pfam PF13185 GAF domain 367 518 1.5E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 SUPERFAMILY SSF55781 350 525 1.24E-20 T 14-10-2018 VS_1504 c371cb834fa770751821dcebece1d860 715 SMART SM00267 526 705 2.3E-35 T 14-10-2018 IPR000160 GGDEF domain VS_1504 c371cb834fa770751821dcebece1d860 715 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 533 704 4.7E-37 T 14-10-2018 IPR000160 GGDEF domain VS_1504 c371cb834fa770751821dcebece1d860 715 Pfam PF00990 Diguanylate cyclase, GGDEF domain 538 701 1.7E-32 T 14-10-2018 IPR000160 GGDEF domain VS_1504 c371cb834fa770751821dcebece1d860 715 SMART SM00028 164 197 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 SMART SM00028 85 118 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 SMART SM00028 124 157 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 SMART SM00028 46 79 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 SMART SM00065 369 527 3.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 Gene3D G3DSA:3.30.70.270 527 707 2.6E-39 T 14-10-2018 VS_1504 c371cb834fa770751821dcebece1d860 715 Gene3D G3DSA:3.30.450.40 344 526 4.8E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_1504 c371cb834fa770751821dcebece1d860 715 SUPERFAMILY SSF48452 93 267 6.9E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1504 c371cb834fa770751821dcebece1d860 715 Gene3D G3DSA:1.25.40.10 21 332 1.7E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_3023 0e6a1903d898325884ac87981192975e 200 SUPERFAMILY SSF53335 19 194 1.04E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_3023 0e6a1903d898325884ac87981192975e 200 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 18 196 7.7E-63 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VS_3023 0e6a1903d898325884ac87981192975e 200 PIRSF PIRSF004553 18 198 9.4E-55 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VS_3023 0e6a1903d898325884ac87981192975e 200 Pfam PF03602 Conserved hypothetical protein 95 19 194 1.0E-61 T 14-10-2018 VS_3023 0e6a1903d898325884ac87981192975e 200 Gene3D G3DSA:3.40.50.150 6 199 1.0E-62 T 14-10-2018 VS_3023 0e6a1903d898325884ac87981192975e 200 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 107 124 1.6E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 37 44 1.6E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 138 152 1.6E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 182 199 1.6E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 81 89 1.6E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 50 71 1.6E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 31 274 29.736 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 Gene3D G3DSA:3.40.1190.20 11 280 2.7E-90 T 14-10-2018 IPR029056 Ribokinase-like VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 PIRSF PIRSF000513 23 280 8.8E-96 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 Pfam PF02110 Hydroxyethylthiazole kinase family 29 271 1.2E-71 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1085 c2c0f6ba6925a799cd08da7437bba649 280 SUPERFAMILY SSF53613 25 278 8.02E-61 T 14-10-2018 IPR029056 Ribokinase-like VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 152 186 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 SUPERFAMILY SSF82861 36 121 5.36E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 Pfam PF00924 Mechanosensitive ion channel 80 277 1.5E-57 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 Pfam PF05552 Conserved TM helix 24 72 2.6E-13 T 14-10-2018 IPR008910 Conserved TM helix VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 SUPERFAMILY SSF50182 123 188 1.14E-17 T 14-10-2018 IPR010920 LSM domain superfamily VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 Gene3D G3DSA:3.30.70.100 188 282 2.4E-29 T 14-10-2018 VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 Gene3D G3DSA:2.30.30.60 138 187 5.0E-22 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VS_2644 fc0b610f8b0ec11ed0a4cece33812358 291 SUPERFAMILY SSF82689 190 287 2.35E-34 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VS_II0433 4c120137ddb9c1cedacb0fbf59344609 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 1.2E-19 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_II0433 4c120137ddb9c1cedacb0fbf59344609 127 Gene3D G3DSA:3.10.180.10 7 126 4.3E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II0433 4c120137ddb9c1cedacb0fbf59344609 127 SUPERFAMILY SSF54593 1 126 2.01E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Pfam PF13840 ACT domain 394 456 1.5E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Gene3D G3DSA:3.40.50.720 467 811 2.5E-118 T 14-10-2018 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.9E-46 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 SUPERFAMILY SSF55021 383 476 4.58E-22 T 14-10-2018 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 SUPERFAMILY SSF55347 614 797 4.45E-50 T 14-10-2018 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 SUPERFAMILY SSF55021 303 381 1.56E-22 T 14-10-2018 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Gene3D G3DSA:3.40.1160.10 3 295 2.1E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.5E-26 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Gene3D G3DSA:3.30.2130.10 302 464 2.3E-45 T 14-10-2018 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 SUPERFAMILY SSF53633 1 298 4.71E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.7E-132 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Gene3D G3DSA:3.30.360.10 625 795 2.5E-118 T 14-10-2018 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 SUPERFAMILY SSF51735 463 636 1.15E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Pfam PF01842 ACT domain 324 377 3.4E-9 T 14-10-2018 IPR002912 ACT domain VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Pfam PF00696 Amino acid kinase family 2 284 3.5E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_0483 1548ccd0d1458f566bfe1d8ed5f55294 819 Gene3D G3DSA:1.20.120.1320 41 142 2.1E-87 T 14-10-2018 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 PIRSF PIRSF002097 1 98 2.8E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.5 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 Gene3D G3DSA:1.10.10.60 1 98 1.7E-32 T 14-10-2018 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_2948 f9fb2c0e01a8d28fb9aaa749b9a258ff 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_2482 bf01739d0fec54ee81357e115b32460d 896 SUPERFAMILY SSF52156 673 802 9.29E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VS_2482 bf01739d0fec54ee81357e115b32460d 896 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.9E-16 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VS_2482 bf01739d0fec54ee81357e115b32460d 896 SUPERFAMILY SSF50447 569 650 9.56E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2482 bf01739d0fec54ee81357e115b32460d 896 Pfam PF11987 Translation-initiation factor 2 680 785 9.9E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VS_2482 bf01739d0fec54ee81357e115b32460d 896 SUPERFAMILY SSF52540 394 560 4.3E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2482 bf01739d0fec54ee81357e115b32460d 896 Gene3D G3DSA:2.40.30.10 567 685 2.0E-40 T 14-10-2018 VS_2482 bf01739d0fec54ee81357e115b32460d 896 Pfam PF00009 Elongation factor Tu GTP binding domain 400 555 3.0E-31 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2482 bf01739d0fec54ee81357e115b32460d 896 ProSitePatterns PS01176 Initiation factor 2 signature. 846 868 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VS_2482 bf01739d0fec54ee81357e115b32460d 896 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 313 895 6.8E-283 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VS_2482 bf01739d0fec54ee81357e115b32460d 896 SUPERFAMILY SSF50447 797 893 4.52E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2482 bf01739d0fec54ee81357e115b32460d 896 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 398 553 6.3E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2482 bf01739d0fec54ee81357e115b32460d 896 SUPERFAMILY SSF46955 3 50 6.04E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VS_2482 bf01739d0fec54ee81357e115b32460d 896 Gene3D G3DSA:3.30.56.50 2 50 1.8E-23 T 14-10-2018 VS_2482 bf01739d0fec54ee81357e115b32460d 896 Gene3D G3DSA:2.40.30.10 797 894 1.1E-33 T 14-10-2018 VS_2482 bf01739d0fec54ee81357e115b32460d 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.5E-7 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VS_2482 bf01739d0fec54ee81357e115b32460d 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 320 370 9.9E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VS_2482 bf01739d0fec54ee81357e115b32460d 896 Gene3D G3DSA:3.40.50.300 393 566 5.7E-69 T 14-10-2018 VS_2482 bf01739d0fec54ee81357e115b32460d 896 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 893 17.463 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VS_2482 bf01739d0fec54ee81357e115b32460d 896 Gene3D G3DSA:3.40.50.10050 690 796 2.8E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 SUPERFAMILY SSF47413 1 59 4.5E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 Gene3D G3DSA:3.40.50.2300 69 322 2.1E-83 T 14-10-2018 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.0E-40 T 14-10-2018 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 SMART SM00354 1 71 2.7E-35 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 Gene3D G3DSA:1.10.260.40 3 59 3.8E-23 T 14-10-2018 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 SUPERFAMILY SSF53822 60 331 1.43E-89 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II0945 ca932cd6d582208fb1b76218af452c4e 333 Gene3D G3DSA:3.40.50.2300 161 290 2.1E-83 T 14-10-2018 VS_2892 a5e7d677080a644a6e88b0e88fd94a74 337 Pfam PF02219 Methylenetetrahydrofolate reductase 55 329 1.1E-101 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VS_2892 a5e7d677080a644a6e88b0e88fd94a74 337 SUPERFAMILY SSF51730 60 332 1.28E-95 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VS_2892 a5e7d677080a644a6e88b0e88fd94a74 337 Gene3D G3DSA:3.20.20.220 39 336 4.5E-112 T 14-10-2018 VS_2892 a5e7d677080a644a6e88b0e88fd94a74 337 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 63 328 2.6E-103 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 VS_2517 de4399277153914acb19298f2d35e072 541 Gene3D G3DSA:1.10.3720.10 285 541 6.8E-35 T 14-10-2018 IPR035906 MetI-like superfamily VS_2517 de4399277153914acb19298f2d35e072 541 Gene3D G3DSA:1.10.3720.10 8 266 4.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily VS_2517 de4399277153914acb19298f2d35e072 541 SUPERFAMILY SSF161098 282 535 3.08E-41 T 14-10-2018 IPR035906 MetI-like superfamily VS_2517 de4399277153914acb19298f2d35e072 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 534 6.6E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2517 de4399277153914acb19298f2d35e072 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 2.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2517 de4399277153914acb19298f2d35e072 541 SUPERFAMILY SSF161098 6 254 2.75E-44 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1121 92b75e95243d80707108d37f9fcd4087 310 SUPERFAMILY SSF53850 90 296 8.32E-38 T 14-10-2018 VS_II1121 92b75e95243d80707108d37f9fcd4087 310 SUPERFAMILY SSF46785 3 111 2.13E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1121 92b75e95243d80707108d37f9fcd4087 310 Gene3D G3DSA:3.40.190.290 90 291 2.7E-52 T 14-10-2018 VS_II1121 92b75e95243d80707108d37f9fcd4087 310 Gene3D G3DSA:1.10.10.10 1 87 1.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1121 92b75e95243d80707108d37f9fcd4087 310 Pfam PF03466 LysR substrate binding domain 90 292 7.0E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1121 92b75e95243d80707108d37f9fcd4087 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.5E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1301 58cbf623d187e56c93f81b96ddd15ae1 289 SUPERFAMILY SSF53850 90 288 1.07E-46 T 14-10-2018 VS_II1301 58cbf623d187e56c93f81b96ddd15ae1 289 Gene3D G3DSA:1.10.10.10 3 91 1.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1301 58cbf623d187e56c93f81b96ddd15ae1 289 SUPERFAMILY SSF46785 4 87 1.55E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1301 58cbf623d187e56c93f81b96ddd15ae1 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1301 58cbf623d187e56c93f81b96ddd15ae1 289 Gene3D G3DSA:3.40.190.290 92 287 1.9E-68 T 14-10-2018 VS_II1301 58cbf623d187e56c93f81b96ddd15ae1 289 Pfam PF03466 LysR substrate binding domain 89 288 3.2E-47 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 SMART SM00228 268 350 4.3E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 Gene3D G3DSA:2.30.42.10 268 364 3.5E-22 T 14-10-2018 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 Pfam PF13365 Trypsin-like peptidase domain 93 227 5.3E-33 T 14-10-2018 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 PRINTS PR00834 HtrA/DegQ protease family signature 198 215 1.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 1.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 1.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 PRINTS PR00834 HtrA/DegQ protease family signature 163 187 1.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 Gene3D G3DSA:2.40.10.10 155 267 1.4E-36 T 14-10-2018 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 Pfam PF13180 PDZ domain 269 358 1.3E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 SUPERFAMILY SSF50156 251 358 5.06E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 13 363 5.5E-166 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 Gene3D G3DSA:2.40.10.10 41 153 4.6E-31 T 14-10-2018 VS_0425 5949f9a70ed7566281a8f8359f86dbcf 365 SUPERFAMILY SSF50494 54 277 3.46E-61 T 14-10-2018 IPR009003 Peptidase S1, PA clan VS_0134 87e320f470ecc1433a9f3ba08c887d1c 307 Gene3D G3DSA:2.30.30.830 109 176 1.4E-28 T 14-10-2018 VS_0134 87e320f470ecc1433a9f3ba08c887d1c 307 SUPERFAMILY SSF50156 214 306 2.41E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VS_0134 87e320f470ecc1433a9f3ba08c887d1c 307 Pfam PF11356 Type II secretion system protein C 37 175 4.7E-44 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal VS_0134 87e320f470ecc1433a9f3ba08c887d1c 307 Gene3D G3DSA:2.30.42.10 203 307 1.0E-27 T 14-10-2018 VS_0134 87e320f470ecc1433a9f3ba08c887d1c 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 1.0E-76 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VS_1839 6691a623a3c27889e83d5a0f062dfa00 402 Pfam PF07055 Enoyl reductase FAD binding domain 328 391 7.0E-30 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_1839 6691a623a3c27889e83d5a0f062dfa00 402 Gene3D G3DSA:3.40.50.720 2 400 3.2E-179 T 14-10-2018 VS_1839 6691a623a3c27889e83d5a0f062dfa00 402 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 1.0E-112 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_1839 6691a623a3c27889e83d5a0f062dfa00 402 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 3 397 56.92 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_1839 6691a623a3c27889e83d5a0f062dfa00 402 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 4 82 1.0E-36 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_2650 c7dee839b0cd4a0d3e8e4b9678c5d4a1 414 Gene3D G3DSA:3.40.190.10 137 391 9.1E-116 T 14-10-2018 VS_2650 c7dee839b0cd4a0d3e8e4b9678c5d4a1 414 Gene3D G3DSA:3.40.190.10 22 369 9.1E-116 T 14-10-2018 VS_2650 c7dee839b0cd4a0d3e8e4b9678c5d4a1 414 Pfam PF13416 Bacterial extracellular solute-binding protein 68 337 5.8E-16 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_2650 c7dee839b0cd4a0d3e8e4b9678c5d4a1 414 SUPERFAMILY SSF53850 20 394 3.86E-42 T 14-10-2018 VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 Gene3D G3DSA:3.40.50.1100 83 392 3.2E-137 T 14-10-2018 VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 365 3.1E-23 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 TIGRFAM TIGR00260 thrC: threonine synthase 52 391 3.6E-112 T 14-10-2018 IPR004450 Threonine synthase-like VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 SUPERFAMILY SSF53686 1 424 1.7E-129 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 Pfam PF14821 Threonine synthase N terminus 8 78 1.3E-8 T 14-10-2018 IPR029144 Threonine synthase, N-terminal VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 Gene3D G3DSA:3.90.1380.10 1 79 1.7E-31 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VS_0485 5bc9155057264100664dbdcd2fb0e4f0 427 Gene3D G3DSA:3.40.50.1100 101 399 3.2E-137 T 14-10-2018 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Gene3D G3DSA:2.40.30.10 203 303 5.2E-32 T 14-10-2018 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Pfam PF00679 Elongation factor G C-terminus 400 481 6.6E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 2.7E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 SUPERFAMILY SSF54980 306 391 7.55E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Gene3D G3DSA:3.30.70.240 393 486 3.7E-129 T 14-10-2018 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 SUPERFAMILY SSF54980 402 516 1.25E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 SUPERFAMILY SSF52540 5 211 1.61E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 6.1E-290 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 2.3E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Gene3D G3DSA:2.40.50.250 487 603 3.7E-129 T 14-10-2018 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 SUPERFAMILY SSF50447 155 303 1.75E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Pfam PF03144 Elongation factor Tu domain 2 223 293 4.5E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Gene3D G3DSA:3.40.50.300 5 202 1.6E-68 T 14-10-2018 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 Gene3D G3DSA:3.30.70.870 310 594 3.7E-129 T 14-10-2018 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_0123 8bb2a314293f3c595c976c7fe0f6be5b 610 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 Gene3D G3DSA:3.40.1110.10 481 609 2.9E-79 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 675 694 2.1E-27 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 602 613 2.1E-27 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 634 2.1E-27 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 698 710 2.1E-27 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 319 333 2.1E-27 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 470 484 2.1E-27 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 219 777 2.1E-171 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00941 Cadmium-transporting ATPase signature 92 113 1.5E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00941 Cadmium-transporting ATPase signature 254 274 1.5E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 PRINTS PR00941 Cadmium-transporting ATPase signature 354 368 1.5E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 SUPERFAMILY SSF56784 468 775 6.08E-48 T 14-10-2018 IPR036412 HAD-like superfamily VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 219 521 7.0E-95 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 Pfam PF00702 haloacid dehalogenase-like hydrolase 466 689 7.0E-35 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 Gene3D G3DSA:3.30.70.100 78 144 1.4E-13 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 Pfam PF00403 Heavy-metal-associated domain 83 132 9.4E-12 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 Pfam PF00122 E1-E2 ATPase 270 450 2.6E-49 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 Gene3D G3DSA:2.70.150.20 269 374 2.6E-30 T 14-10-2018 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 Gene3D G3DSA:3.40.50.1000 451 727 2.9E-79 T 14-10-2018 IPR023214 HAD superfamily VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 SUPERFAMILY SSF81653 272 369 3.79E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 SUPERFAMILY SSF81665 222 763 3.92E-19 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 242 754 1.0E-77 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 472 478 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 ProSitePatterns PS01047 Heavy-metal-associated domain. 83 112 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VS_2083 48f66d337b3b1dbb42458144f2338d3b 785 SUPERFAMILY SSF55008 80 142 4.45E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 SUPERFAMILY SSF51419 32 285 4.94E-60 T 14-10-2018 IPR029066 PLP-binding barrel VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 282 4.5E-32 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 PRINTS PR01182 Ornithine decarboxylase signature 96 120 6.7E-8 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 PRINTS PR01182 Ornithine decarboxylase signature 53 80 6.7E-8 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 PRINTS PR01182 Ornithine decarboxylase signature 365 378 6.7E-8 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 378 2.3E-14 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 SUPERFAMILY SSF50621 247 398 2.93E-34 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 4.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 4.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 4.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 4.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 Gene3D G3DSA:3.20.20.10 34 263 1.3E-45 T 14-10-2018 IPR029066 PLP-binding barrel VS_II1133 6dfe6d34e90cfcd58937d6a2f818dfe0 400 Gene3D G3DSA:2.40.37.10 264 399 1.8E-40 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_II0587 33fd770b71841c9fe8940ede9cd9b1ec 603 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 2.4E-246 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 VS_II0587 33fd770b71841c9fe8940ede9cd9b1ec 603 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 94 266 2.1E-71 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 VS_II0587 33fd770b71841c9fe8940ede9cd9b1ec 603 Gene3D G3DSA:3.40.50.1820 228 515 2.1E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0587 33fd770b71841c9fe8940ede9cd9b1ec 603 SUPERFAMILY SSF53474 224 526 1.34E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2940 c190807e35d7db61d3a20b4a97d15fa9 607 Gene3D G3DSA:3.10.580.10 139 288 8.8E-18 T 14-10-2018 VS_2940 c190807e35d7db61d3a20b4a97d15fa9 607 SUPERFAMILY SSF54631 144 275 3.3E-18 T 14-10-2018 VS_2940 c190807e35d7db61d3a20b4a97d15fa9 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 1.2E-36 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VS_2940 c190807e35d7db61d3a20b4a97d15fa9 607 Pfam PF00027 Cyclic nucleotide-binding domain 30 111 3.0E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_2940 c190807e35d7db61d3a20b4a97d15fa9 607 Gene3D G3DSA:2.60.120.10 5 138 1.9E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_2940 c190807e35d7db61d3a20b4a97d15fa9 607 SUPERFAMILY SSF51206 8 128 6.02E-15 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_2940 c190807e35d7db61d3a20b4a97d15fa9 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 432 1.5E-42 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VS_0896 f22e0fa04986d684bfa4ace52eff9391 173 Gene3D G3DSA:3.40.50.360 1 173 8.1E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0896 f22e0fa04986d684bfa4ace52eff9391 173 Pfam PF03358 NADPH-dependent FMN reductase 1 126 1.7E-24 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VS_0896 f22e0fa04986d684bfa4ace52eff9391 173 SUPERFAMILY SSF52218 1 173 1.02E-34 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_II0893 0a9bbf13d26df9d6b7139ec9d7b52dac 131 Gene3D G3DSA:1.10.760.10 33 115 8.2E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0893 0a9bbf13d26df9d6b7139ec9d7b52dac 131 Pfam PF00034 Cytochrome c 38 109 1.8E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0893 0a9bbf13d26df9d6b7139ec9d7b52dac 131 SUPERFAMILY SSF46626 14 115 1.28E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1996 6b1bc21224410d77f3dcadcbcb48310d 333 Gene3D G3DSA:3.40.50.300 2 333 1.1E-71 T 14-10-2018 VS_1996 6b1bc21224410d77f3dcadcbcb48310d 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 8.4E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_1996 6b1bc21224410d77f3dcadcbcb48310d 333 SMART SM00382 32 237 4.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1996 6b1bc21224410d77f3dcadcbcb48310d 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 5.5E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_1996 6b1bc21224410d77f3dcadcbcb48310d 333 SUPERFAMILY SSF52540 3 269 1.65E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1996 6b1bc21224410d77f3dcadcbcb48310d 333 Pfam PF00005 ABC transporter 24 187 9.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 Pfam PF00271 Helicase conserved C-terminal domain 238 337 3.3E-26 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 SMART SM00490 257 338 9.2E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 Gene3D G3DSA:3.40.50.300 1 209 6.4E-76 T 14-10-2018 VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 Pfam PF00270 DEAD/DEAH box helicase 25 193 8.6E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 SUPERFAMILY SSF52540 73 359 3.29E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 Gene3D G3DSA:3.40.50.300 213 398 7.0E-44 T 14-10-2018 VS_II1158 b4808998e2a1f804a42be20e0c8a254b 399 SMART SM00487 20 221 1.3E-61 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_0401 1553509bc6e193f029962b58a85d7e88 338 SUPERFAMILY SSF53067 3 123 2.85E-30 T 14-10-2018 VS_0401 1553509bc6e193f029962b58a85d7e88 338 Gene3D G3DSA:3.30.420.40 129 293 1.9E-131 T 14-10-2018 VS_0401 1553509bc6e193f029962b58a85d7e88 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VS_0401 1553509bc6e193f029962b58a85d7e88 338 Gene3D G3DSA:3.30.420.40 3 315 1.9E-131 T 14-10-2018 VS_0401 1553509bc6e193f029962b58a85d7e88 338 SUPERFAMILY SSF53067 101 309 1.89E-45 T 14-10-2018 VS_0401 1553509bc6e193f029962b58a85d7e88 338 Pfam PF00814 Glycoprotease family 24 307 1.1E-102 T 14-10-2018 IPR000905 Gcp-like domain VS_0401 1553509bc6e193f029962b58a85d7e88 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.0E-134 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VS_0401 1553509bc6e193f029962b58a85d7e88 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family VS_0401 1553509bc6e193f029962b58a85d7e88 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family VS_0401 1553509bc6e193f029962b58a85d7e88 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family VS_0401 1553509bc6e193f029962b58a85d7e88 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family VS_0401 1553509bc6e193f029962b58a85d7e88 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family VS_0401 1553509bc6e193f029962b58a85d7e88 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family VS_0401 1553509bc6e193f029962b58a85d7e88 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.498 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VS_0401 1553509bc6e193f029962b58a85d7e88 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 8.2E-125 T 14-10-2018 IPR017861 Kae1/TsaD family VS_0856 1d5529ac29b755bdf0a8ebf58a6ad749 183 Gene3D G3DSA:3.40.30.10 20 183 8.8E-45 T 14-10-2018 VS_0856 1d5529ac29b755bdf0a8ebf58a6ad749 183 SUPERFAMILY SSF52833 46 178 2.96E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0856 1d5529ac29b755bdf0a8ebf58a6ad749 183 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VS_0856 1d5529ac29b755bdf0a8ebf58a6ad749 183 Pfam PF08534 Redoxin 42 165 3.3E-25 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VS_0856 1d5529ac29b755bdf0a8ebf58a6ad749 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 2.4E-70 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VS_3121 8d5c3117af50b59613526e91d63f7022 376 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.994 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VS_3121 8d5c3117af50b59613526e91d63f7022 376 SUPERFAMILY SSF56059 92 295 8.49E-55 T 14-10-2018 VS_3121 8d5c3117af50b59613526e91d63f7022 376 Pfam PF02222 ATP-grasp domain 101 274 2.8E-51 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VS_3121 8d5c3117af50b59613526e91d63f7022 376 SUPERFAMILY SSF51246 298 374 1.49E-18 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VS_3121 8d5c3117af50b59613526e91d63f7022 376 Gene3D G3DSA:3.30.1490.20 102 163 7.0E-17 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_3121 8d5c3117af50b59613526e91d63f7022 376 Gene3D G3DSA:3.30.470.20 164 375 4.4E-73 T 14-10-2018 VS_3121 8d5c3117af50b59613526e91d63f7022 376 Gene3D G3DSA:3.40.50.20 1 80 2.4E-19 T 14-10-2018 VS_3121 8d5c3117af50b59613526e91d63f7022 376 SUPERFAMILY SSF52440 1 88 4.32E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_3121 8d5c3117af50b59613526e91d63f7022 376 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 3.8E-105 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VS_0581 1807999a6e6716ed5a9f495acbbd22ad 325 Gene3D G3DSA:3.40.190.10 127 269 2.9E-97 T 14-10-2018 VS_0581 1807999a6e6716ed5a9f495acbbd22ad 325 SUPERFAMILY SSF53850 40 322 2.08E-65 T 14-10-2018 VS_0581 1807999a6e6716ed5a9f495acbbd22ad 325 Pfam PF12849 PBP superfamily domain 42 297 5.7E-27 T 14-10-2018 IPR024370 PBP domain VS_0581 1807999a6e6716ed5a9f495acbbd22ad 325 Gene3D G3DSA:3.40.190.10 42 313 2.9E-97 T 14-10-2018 VS_0581 1807999a6e6716ed5a9f495acbbd22ad 325 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 17 310 1.1E-73 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 309 5.8E-103 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 173 309 2.7E-20 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 PRINTS PR01002 Flagellar protein FlgJ signature 227 248 3.1E-26 T 14-10-2018 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 3.1E-26 T 14-10-2018 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 3.1E-26 T 14-10-2018 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 PRINTS PR01002 Flagellar protein FlgJ signature 249 270 3.1E-26 T 14-10-2018 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 PRINTS PR01002 Flagellar protein FlgJ signature 186 204 3.1E-26 T 14-10-2018 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 PRINTS PR01002 Flagellar protein FlgJ signature 292 310 3.1E-26 T 14-10-2018 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 Gene3D G3DSA:1.10.530.10 164 309 1.6E-44 T 14-10-2018 VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 Pfam PF10135 Rod binding protein 53 102 8.0E-14 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VS_0809 c180f0d653fe36e319ad0c105c51b0a7 313 SMART SM00047 151 313 7.1E-51 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 Gene3D G3DSA:3.30.2350.20 28 346 8.4E-101 T 14-10-2018 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 195 346 4.3E-23 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 19 180 1.3E-40 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 Gene3D G3DSA:3.30.2340.10 179 311 8.4E-101 T 14-10-2018 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 SUPERFAMILY SSF55120 16 347 1.14E-89 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 88 101 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 16 351 27.455 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2603 386a57caeea4fd851ed6984062bcde4f 358 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 19 232 1.8E-52 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 40 285 3.3E-86 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.09 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 Gene3D G3DSA:1.20.1640.10 105 299 3.9E-12 T 14-10-2018 VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 5.0E-56 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.7E-10 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 Pfam PF02355 Protein export membrane protein 113 292 5.4E-71 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 SUPERFAMILY SSF82866 74 293 8.63E-41 T 14-10-2018 VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 1.4E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 1.4E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 1.4E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_0602 d478c9666c9c60f76b0d2ec3195ac6dc 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 1.4E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 9.5E-25 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 1.2E-17 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 Gene3D G3DSA:2.30.110.10 13 211 4.2E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 SUPERFAMILY SSF50475 14 211 3.18E-64 T 14-10-2018 VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.36 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 7.7E-89 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VS_II0011 2f4f42bf0a8051a78b8e2065698403d9 211 PIRSF PIRSF000190 1 211 5.9E-82 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 SUPERFAMILY SSF51998 222 738 1.59E-165 T 14-10-2018 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 SUPERFAMILY SSF48168 10 221 1.7E-72 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.4E-121 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 Gene3D G3DSA:3.20.70.20 78 741 1.5E-155 T 14-10-2018 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.1E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.1E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.1E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.1E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.1E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.1E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 Pfam PF03477 ATP cone domain 6 92 1.5E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.1E-175 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1939 44b37ef7b1e863a5ee30983d1a0742f9 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.6E-11 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_II0281 8d65b02ead59d57048149c97c7a67ce9 100 Pfam PF07383 Protein of unknown function (DUF1496) 43 94 6.5E-23 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 SUPERFAMILY SSF47413 1 59 2.99E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 SMART SM00354 1 71 9.3E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 Gene3D G3DSA:1.10.260.40 3 59 3.2E-24 T 14-10-2018 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 SUPERFAMILY SSF53822 60 331 2.55E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 Gene3D G3DSA:3.40.50.2300 69 322 4.2E-92 T 14-10-2018 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 Gene3D G3DSA:3.40.50.2300 161 323 4.2E-92 T 14-10-2018 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.2E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 3.6E-42 T 14-10-2018 VS_1088 0300f5343ee4fe9c81967ce20ff56a58 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 61.465 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VS_2032 c0dcf1664dc8b21a8bc8b89fa91cd238 378 Gene3D G3DSA:2.40.30.10 296 378 2.4E-32 T 14-10-2018 VS_2032 c0dcf1664dc8b21a8bc8b89fa91cd238 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 374 2.7E-149 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VS_2032 c0dcf1664dc8b21a8bc8b89fa91cd238 378 Pfam PF03054 tRNA methyl transferase 11 374 4.2E-139 T 14-10-2018 VS_2032 c0dcf1664dc8b21a8bc8b89fa91cd238 378 SUPERFAMILY SSF52402 9 256 6.62E-56 T 14-10-2018 VS_2032 c0dcf1664dc8b21a8bc8b89fa91cd238 378 Gene3D G3DSA:3.40.50.620 2 223 9.1E-93 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2032 c0dcf1664dc8b21a8bc8b89fa91cd238 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 375 39.405 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VS_2032 c0dcf1664dc8b21a8bc8b89fa91cd238 378 Gene3D G3DSA:2.30.30.280 225 294 5.1E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 SUPERFAMILY SSF55347 152 314 1.4E-63 T 14-10-2018 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 SUPERFAMILY SSF51735 1 180 1.57E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 SMART SM00846 3 152 1.9E-72 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 7.4E-120 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.1E-59 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 PIRSF PIRSF000149 1 331 2.9E-115 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 Gene3D G3DSA:3.30.360.10 151 315 3.9E-127 T 14-10-2018 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 Gene3D G3DSA:3.40.50.720 4 328 3.9E-127 T 14-10-2018 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 2.7E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.7E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.7E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.7E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.7E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3033 e04cfd06e6ef621aea1d5081d470cd7d 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 3.3E-33 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 Pfam PF00005 ABC transporter 304 455 3.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 263 7.4E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 538 0.0042 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 SUPERFAMILY SSF52540 294 526 1.98E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 SMART SM00382 35 235 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 SMART SM00382 312 504 2.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 Gene3D G3DSA:3.40.50.300 4 279 1.3E-80 T 14-10-2018 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 Gene3D G3DSA:3.40.50.300 282 542 1.1E-84 T 14-10-2018 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 SUPERFAMILY SSF52540 6 256 5.44E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1377 cdda980b075c1616cb7bbed48b661edf 542 Pfam PF00005 ABC transporter 27 185 7.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0236 28770b7c72fc4584865804cab1287d46 476 PIRSF PIRSF006603 25 474 1.9E-130 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_0236 28770b7c72fc4584865804cab1287d46 476 TIGRFAM TIGR00797 matE: MATE efflux family protein 51 437 1.5E-56 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_0236 28770b7c72fc4584865804cab1287d46 476 Pfam PF01554 MatE 51 210 6.5E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_0236 28770b7c72fc4584865804cab1287d46 476 Pfam PF01554 MatE 274 435 1.4E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_0654 4162a12a4fce22b3ef6c2c0c5242b539 168 Pfam PF12019 Type II transport protein GspH 41 147 4.9E-9 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VS_0654 4162a12a4fce22b3ef6c2c0c5242b539 168 Gene3D G3DSA:3.30.700.10 5 140 1.9E-10 T 14-10-2018 VS_0654 4162a12a4fce22b3ef6c2c0c5242b539 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0654 4162a12a4fce22b3ef6c2c0c5242b539 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 1.9E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0654 4162a12a4fce22b3ef6c2c0c5242b539 168 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 1.7E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0654 4162a12a4fce22b3ef6c2c0c5242b539 168 PIRSF PIRSF024622 1 168 1.7E-57 T 14-10-2018 IPR016824 Tfp pilus assembly protein FimT VS_0654 4162a12a4fce22b3ef6c2c0c5242b539 168 SUPERFAMILY SSF54523 5 90 6.91E-14 T 14-10-2018 VS_1253 62c928ba33050f70eee174614f909daa 238 SMART SM00479 50 224 4.0E-16 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_1253 62c928ba33050f70eee174614f909daa 238 Gene3D G3DSA:3.30.420.10 44 225 2.6E-32 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1253 62c928ba33050f70eee174614f909daa 238 SUPERFAMILY SSF53098 44 222 2.01E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1253 62c928ba33050f70eee174614f909daa 238 Pfam PF00929 Exonuclease 52 215 2.8E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 Gene3D G3DSA:3.20.110.10 1 275 4.9E-99 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 SMART SM00872 278 356 3.6E-13 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 SUPERFAMILY SSF88688 284 375 6.54E-6 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 SUPERFAMILY SSF74650 373 859 2.35E-68 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 6 265 1.1E-35 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 387 838 1.6E-27 T 14-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 Gene3D G3DSA:2.70.98.30 479 768 3.0E-73 T 14-10-2018 VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 Pfam PF09261 Alpha mannosidase middle domain 279 356 1.5E-6 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 Gene3D G3DSA:1.20.1270.50 282 380 5.3E-26 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 VS_II0606 a43c366c2d7df00c6efee4423c2ad371 884 SUPERFAMILY SSF88713 5 271 1.04E-48 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 Pfam PF00551 Formyl transferase 82 259 1.6E-48 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.9E-123 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 SUPERFAMILY SSF55021 4 66 9.99E-9 T 14-10-2018 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 6.4E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 6.4E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 6.4E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 6.4E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 6.4E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 6.4E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 Gene3D G3DSA:3.30.70.260 1 80 5.9E-15 T 14-10-2018 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 PIRSF PIRSF036480 1 277 8.2E-113 T 14-10-2018 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 Pfam PF01842 ACT domain 5 66 9.2E-8 T 14-10-2018 IPR002912 ACT domain VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.332 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 Gene3D G3DSA:3.40.50.170 81 277 3.5E-67 T 14-10-2018 VS_2228 dddd0e15d3e14f61ebca397d1b9e0ce7 277 SUPERFAMILY SSF53328 82 276 1.13E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SUPERFAMILY SSF50249 190 277 1.79E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Gene3D G3DSA:2.40.50.140 358 444 1.6E-23 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Gene3D G3DSA:2.40.50.140 269 357 3.1E-31 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SUPERFAMILY SSF50249 104 184 4.32E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Gene3D G3DSA:2.40.50.140 187 268 3.6E-27 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Pfam PF00575 S1 RNA binding domain 362 434 1.7E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Pfam PF00575 S1 RNA binding domain 449 520 3.9E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Pfam PF00575 S1 RNA binding domain 104 171 7.8E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Pfam PF00575 S1 RNA binding domain 275 347 7.9E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Pfam PF00575 S1 RNA binding domain 18 86 4.2E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Pfam PF00575 S1 RNA binding domain 189 260 3.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SUPERFAMILY SSF50249 255 363 3.43E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SUPERFAMILY SSF50249 429 538 2.09E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Gene3D G3DSA:2.40.50.140 445 528 4.5E-18 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Gene3D G3DSA:2.40.50.140 99 178 1.8E-5 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PIRSF PIRSF002111 1 534 1.2E-216 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 Gene3D G3DSA:2.40.50.140 6 98 8.3E-17 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SUPERFAMILY SSF50249 3 112 4.72E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SUPERFAMILY SSF50249 342 440 1.34E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 7.3E-230 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SMART SM00316 362 434 2.8E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SMART SM00316 190 260 9.7E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SMART SM00316 103 171 1.2E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SMART SM00316 449 520 2.6E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SMART SM00316 19 87 6.1E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 SMART SM00316 275 347 8.3E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.0E-97 T 14-10-2018 VS_2057 a677a8fae0739ddb6bef6cdaee9fca04 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.0E-97 T 14-10-2018 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 Gene3D G3DSA:1.10.10.10 171 241 1.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 SMART SM00421 178 235 1.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 SUPERFAMILY SSF55785 33 144 2.97E-8 T 14-10-2018 IPR035965 PAS domain superfamily VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 SUPERFAMILY SSF46894 173 240 3.33E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 Pfam PF08448 PAS fold 34 145 6.1E-22 T 14-10-2018 IPR013656 PAS fold-4 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 Gene3D G3DSA:3.30.450.20 28 149 2.0E-11 T 14-10-2018 VS_II0012 4d34e19303f7eae1bc98f4285b4d1c33 260 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 235 4.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0002 66460ec92d7e8916d4447522550d3f72 324 SMART SM00470 58 149 5.2E-7 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VS_II0002 66460ec92d7e8916d4447522550d3f72 324 Gene3D G3DSA:1.10.10.2830 153 265 1.1E-15 T 14-10-2018 VS_II0002 66460ec92d7e8916d4447522550d3f72 324 Pfam PF02195 ParB-like nuclease domain 74 142 9.3E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VS_II0002 66460ec92d7e8916d4447522550d3f72 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 228 4.0E-23 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VS_II0002 66460ec92d7e8916d4447522550d3f72 324 SUPERFAMILY SSF110849 75 150 1.26E-8 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 PIRSF PIRSF006092 1 157 4.3E-44 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 SUPERFAMILY SSF46557 2 75 2.09E-24 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 Gene3D G3DSA:1.10.287.180 1 74 1.0E-24 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.207 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.9E-51 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 SUPERFAMILY SSF54534 81 156 4.71E-23 T 14-10-2018 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.1E-26 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 Gene3D G3DSA:3.10.50.30 75 157 7.0E-29 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VS_2493 7781dbf5ba6a2cf2dc25de7b4e39bf67 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 8.6E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VS_II0284 1cfc212dd12b1b7307eb01ceff77cabc 260 SMART SM00382 30 219 9.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0284 1cfc212dd12b1b7307eb01ceff77cabc 260 Pfam PF00005 ABC transporter 21 170 4.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0284 1cfc212dd12b1b7307eb01ceff77cabc 260 SUPERFAMILY SSF52540 5 231 7.14E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0284 1cfc212dd12b1b7307eb01ceff77cabc 260 Gene3D G3DSA:3.40.50.300 3 259 2.1E-58 T 14-10-2018 VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 Pfam PF05729 NACHT domain 290 382 1.5E-6 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 Gene3D G3DSA:3.40.50.300 230 407 8.2E-8 T 14-10-2018 VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 Gene3D G3DSA:2.160.20.80 782 876 1.1E-10 T 14-10-2018 VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 Pfam PF13599 Pentapeptide repeats (9 copies) 842 915 4.2E-7 T 14-10-2018 IPR001646 Pentapeptide repeat VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 SUPERFAMILY SSF141571 842 975 2.22E-29 T 14-10-2018 VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 Pfam PF00805 Pentapeptide repeats (8 copies) 921 960 1.4E-12 T 14-10-2018 IPR001646 Pentapeptide repeat VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 SUPERFAMILY SSF52540 250 411 8.27E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1190 9f35830933c5cba6a71c843b14fbd8d0 1067 Gene3D G3DSA:2.160.20.80 877 977 1.0E-21 T 14-10-2018 VS_3163 748193931886a8879fbd7957d3845473 631 Gene3D G3DSA:1.10.10.1800 459 550 6.4E-33 T 14-10-2018 VS_3163 748193931886a8879fbd7957d3845473 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VS_3163 748193931886a8879fbd7957d3845473 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.496 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VS_3163 748193931886a8879fbd7957d3845473 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VS_3163 748193931886a8879fbd7957d3845473 631 Pfam PF01134 Glucose inhibited division protein A 8 399 6.0E-168 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VS_3163 748193931886a8879fbd7957d3845473 631 SUPERFAMILY SSF51905 5 261 1.8E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_3163 748193931886a8879fbd7957d3845473 631 SMART SM01228 546 617 4.7E-42 T 14-10-2018 VS_3163 748193931886a8879fbd7957d3845473 631 Pfam PF13932 GidA associated domain 403 616 6.1E-76 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 VS_3163 748193931886a8879fbd7957d3845473 631 Gene3D G3DSA:3.50.50.60 1 232 1.3E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_3163 748193931886a8879fbd7957d3845473 631 Gene3D G3DSA:3.50.50.60 296 458 2.0E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_3163 748193931886a8879fbd7957d3845473 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 5.1E-294 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VS_3163 748193931886a8879fbd7957d3845473 631 Gene3D G3DSA:1.10.150.570 569 622 1.7E-22 T 14-10-2018 VS_2218 c0d74bf2fd8f24f55305bd2c2bbe337e 545 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 83 521 1.1E-214 T 14-10-2018 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VS_2218 c0d74bf2fd8f24f55305bd2c2bbe337e 545 SUPERFAMILY SSF51412 96 392 3.84E-15 T 14-10-2018 VS_2218 c0d74bf2fd8f24f55305bd2c2bbe337e 545 Gene3D G3DSA:3.20.20.70 89 442 1.0E-42 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0742 d00606a6aae225d13748da17e5903749 157 SUPERFAMILY SSF46689 18 107 1.54E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0742 d00606a6aae225d13748da17e5903749 157 Pfam PF12375 Phage protein 110 142 8.1E-6 T 14-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 VS_1634 c29d66713a9c51df69de40625668c63b 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.7E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1634 c29d66713a9c51df69de40625668c63b 311 SUPERFAMILY SSF53850 94 308 7.96E-36 T 14-10-2018 VS_1634 c29d66713a9c51df69de40625668c63b 311 SUPERFAMILY SSF46785 7 89 1.63E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1634 c29d66713a9c51df69de40625668c63b 311 Gene3D G3DSA:3.40.190.10 176 281 8.6E-41 T 14-10-2018 VS_1634 c29d66713a9c51df69de40625668c63b 311 Gene3D G3DSA:3.40.190.10 94 305 8.6E-41 T 14-10-2018 VS_1634 c29d66713a9c51df69de40625668c63b 311 Gene3D G3DSA:1.10.10.10 4 91 3.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1634 c29d66713a9c51df69de40625668c63b 311 Pfam PF03466 LysR substrate binding domain 108 309 5.9E-18 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 SUPERFAMILY SSF54893 2 100 3.53E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 SUPERFAMILY SSF57825 102 151 1.01E-14 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-36 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 Gene3D G3DSA:3.30.70.140 1 100 1.5E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 3.4E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.657 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 Gene3D G3DSA:2.30.30.20 101 152 2.2E-22 T 14-10-2018 VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 2.4E-60 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VS_2928 9eace9b8c5af2d854c1f68805d8f599c 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 2.0E-18 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VS_1055 a695dd122add64aeac606b48e330a421 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 249 2.2E-82 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VS_1055 a695dd122add64aeac606b48e330a421 256 Gene3D G3DSA:3.40.190.10 112 209 2.5E-72 T 14-10-2018 VS_1055 a695dd122add64aeac606b48e330a421 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 3.0E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1055 a695dd122add64aeac606b48e330a421 256 SUPERFAMILY SSF53850 1 253 1.24E-70 T 14-10-2018 VS_1055 a695dd122add64aeac606b48e330a421 256 Gene3D G3DSA:3.40.190.10 28 248 2.5E-72 T 14-10-2018 VS_1055 a695dd122add64aeac606b48e330a421 256 SMART SM00062 26 252 5.0E-68 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1055 a695dd122add64aeac606b48e330a421 256 SMART SM00079 26 251 1.8E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VS_0290 e4df492d2d8164223e02d5d4fd618e1f 151 Gene3D G3DSA:1.10.10.10 2 88 7.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0290 e4df492d2d8164223e02d5d4fd618e1f 151 Pfam PF01475 Ferric uptake regulator family 19 137 2.4E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VS_0290 e4df492d2d8164223e02d5d4fd618e1f 151 Gene3D G3DSA:3.30.1490.190 89 149 2.7E-17 T 14-10-2018 VS_0290 e4df492d2d8164223e02d5d4fd618e1f 151 SUPERFAMILY SSF46785 11 143 1.24E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1492 9a11d08b7fd7a31f873978342d5f3be3 237 Pfam PF00005 ABC transporter 26 174 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1492 9a11d08b7fd7a31f873978342d5f3be3 237 SMART SM00382 35 220 9.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1492 9a11d08b7fd7a31f873978342d5f3be3 237 SUPERFAMILY SSF52540 6 232 6.98E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1492 9a11d08b7fd7a31f873978342d5f3be3 237 Gene3D G3DSA:3.40.50.300 4 236 9.8E-72 T 14-10-2018 VS_II1492 9a11d08b7fd7a31f873978342d5f3be3 237 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2417 5889201c600c89fbc04927f7f3e6d8f6 135 Gene3D G3DSA:3.30.310.230 8 134 1.4E-43 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VS_2417 5889201c600c89fbc04927f7f3e6d8f6 135 Pfam PF07417 Transcriptional regulator Crl 12 129 4.8E-48 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VS_2417 5889201c600c89fbc04927f7f3e6d8f6 135 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 10 135 31.061 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VS_2188 21fed2c6c904e1cd7d409241b151969b 335 SMART SM00922 123 220 2.8E-6 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VS_2188 21fed2c6c904e1cd7d409241b151969b 335 Gene3D G3DSA:3.20.20.120 106 307 5.4E-114 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VS_2188 21fed2c6c904e1cd7d409241b151969b 335 SUPERFAMILY SSF51604 111 319 5.37E-45 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VS_2188 21fed2c6c904e1cd7d409241b151969b 335 Pfam PF13378 Enolase C-terminal domain-like 132 288 3.3E-12 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VS_2188 21fed2c6c904e1cd7d409241b151969b 335 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 13 318 9.7E-105 T 14-10-2018 VS_2188 21fed2c6c904e1cd7d409241b151969b 335 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 10 333 22.154 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VS_2188 21fed2c6c904e1cd7d409241b151969b 335 SUPERFAMILY SSF54826 8 106 7.85E-24 T 14-10-2018 VS_2188 21fed2c6c904e1cd7d409241b151969b 335 Gene3D G3DSA:3.30.390.10 10 312 5.4E-114 T 14-10-2018 IPR029017 Enolase-like, N-terminal VS_1185 65bb61487489f792e52209063fb470c4 594 Pfam PF00005 ABC transporter 368 512 8.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1185 65bb61487489f792e52209063fb470c4 594 SUPERFAMILY SSF90123 5 330 9.42E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1185 65bb61487489f792e52209063fb470c4 594 SMART SM00382 375 558 3.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1185 65bb61487489f792e52209063fb470c4 594 SUPERFAMILY SSF52540 346 581 5.63E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1185 65bb61487489f792e52209063fb470c4 594 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1185 65bb61487489f792e52209063fb470c4 594 Gene3D G3DSA:1.20.1560.10 1 334 1.2E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1185 65bb61487489f792e52209063fb470c4 594 Gene3D G3DSA:3.40.50.300 345 593 8.2E-64 T 14-10-2018 VS_1185 65bb61487489f792e52209063fb470c4 594 Pfam PF00664 ABC transporter transmembrane region 24 292 1.9E-41 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_1185 65bb61487489f792e52209063fb470c4 594 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 5.3E-178 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 Gene3D G3DSA:3.50.30.80 421 572 4.1E-54 T 14-10-2018 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 Pfam PF00920 Dehydratase family 34 604 4.3E-216 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 SUPERFAMILY SSF143975 4 420 4.32E-134 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 SUPERFAMILY SSF52016 421 608 2.04E-59 T 14-10-2018 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.519 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VS_3146 831d4489f0ce6be715004da8e7fc96d6 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 4.8E-260 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VS_2946 f833f0013bb9d2a0bb6e93470ce86672 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 9.8E-108 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VS_2946 f833f0013bb9d2a0bb6e93470ce86672 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 1.1E-103 T 14-10-2018 VS_2946 f833f0013bb9d2a0bb6e93470ce86672 295 PIRSF PIRSF000401 1 295 1.5E-97 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VS_2946 f833f0013bb9d2a0bb6e93470ce86672 295 Gene3D G3DSA:3.40.50.150 102 294 1.0E-55 T 14-10-2018 VS_2946 f833f0013bb9d2a0bb6e93470ce86672 295 SUPERFAMILY SSF53335 45 274 1.11E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2946 f833f0013bb9d2a0bb6e93470ce86672 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.232 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 SMART SM00344 1 110 9.8E-50 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 SUPERFAMILY SSF54909 61 149 1.61E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 Gene3D G3DSA:3.30.70.920 54 138 5.6E-26 T 14-10-2018 VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 2.1E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 Gene3D G3DSA:1.10.10.10 2 52 2.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.7E-21 T 14-10-2018 VS_1744 f7fac6c335c0931c0c7bb7e6de610d03 151 SUPERFAMILY SSF46785 1 60 9.98E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0291 d0d763f5aa311c1765942bd41942921d 173 PIRSF PIRSF030840 3 173 1.6E-62 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VS_II0291 d0d763f5aa311c1765942bd41942921d 173 Pfam PF06228 Haem utilisation ChuX/HutX 32 169 3.1E-34 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VS_II0291 d0d763f5aa311c1765942bd41942921d 173 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 16 169 1.8E-63 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VS_II0291 d0d763f5aa311c1765942bd41942921d 173 Gene3D G3DSA:3.40.1570.10 2 173 1.9E-61 T 14-10-2018 VS_II0291 d0d763f5aa311c1765942bd41942921d 173 SUPERFAMILY SSF144064 10 172 4.71E-56 T 14-10-2018 VS_II0532 349f09e297ce7dd7a2def64bd6faf51e 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 257 3.2E-51 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II0532 349f09e297ce7dd7a2def64bd6faf51e 269 SMART SM00079 38 258 0.004 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VS_II0532 349f09e297ce7dd7a2def64bd6faf51e 269 Gene3D G3DSA:3.40.190.10 122 213 6.3E-60 T 14-10-2018 VS_II0532 349f09e297ce7dd7a2def64bd6faf51e 269 SUPERFAMILY SSF53850 5 256 4.79E-58 T 14-10-2018 VS_II0532 349f09e297ce7dd7a2def64bd6faf51e 269 SMART SM00062 36 259 2.8E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II0532 349f09e297ce7dd7a2def64bd6faf51e 269 Gene3D G3DSA:3.40.190.10 28 246 6.3E-60 T 14-10-2018 VS_1151 2aa20c43088c88b4c06240992fedaa18 295 SUPERFAMILY SSF46785 3 87 4.01E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1151 2aa20c43088c88b4c06240992fedaa18 295 Gene3D G3DSA:3.40.190.10 100 293 1.9E-39 T 14-10-2018 VS_1151 2aa20c43088c88b4c06240992fedaa18 295 Gene3D G3DSA:1.10.10.10 7 96 4.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1151 2aa20c43088c88b4c06240992fedaa18 295 SUPERFAMILY SSF53850 99 294 1.99E-25 T 14-10-2018 VS_1151 2aa20c43088c88b4c06240992fedaa18 295 Pfam PF03466 LysR substrate binding domain 93 294 1.2E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1151 2aa20c43088c88b4c06240992fedaa18 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1151 2aa20c43088c88b4c06240992fedaa18 295 Gene3D G3DSA:3.40.190.10 162 267 1.9E-39 T 14-10-2018 VS_1151 2aa20c43088c88b4c06240992fedaa18 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1151 2aa20c43088c88b4c06240992fedaa18 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1151 2aa20c43088c88b4c06240992fedaa18 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2481 2b89b91d2e6be87a9a518d2b4254ebb1 137 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 24.481 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VS_2481 2b89b91d2e6be87a9a518d2b4254ebb1 137 Pfam PF02033 Ribosome-binding factor A 7 110 2.4E-28 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VS_2481 2b89b91d2e6be87a9a518d2b4254ebb1 137 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 8.1E-33 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VS_2481 2b89b91d2e6be87a9a518d2b4254ebb1 137 Gene3D G3DSA:3.30.300.20 1 106 1.1E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_2481 2b89b91d2e6be87a9a518d2b4254ebb1 137 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 2.0E-42 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VS_2481 2b89b91d2e6be87a9a518d2b4254ebb1 137 SUPERFAMILY SSF89919 2 105 1.7E-29 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VS_2790 487ba332f50e177ff8949523643b17bf 658 PRINTS PR01607 Apyrase family signature 294 314 1.1E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 PRINTS PR01607 Apyrase family signature 33 51 1.1E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 PRINTS PR01607 Apyrase family signature 541 560 1.1E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 PRINTS PR01607 Apyrase family signature 226 243 1.1E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 PRINTS PR01607 Apyrase family signature 254 277 1.1E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 PRINTS PR01607 Apyrase family signature 439 462 1.1E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 SUPERFAMILY SSF55816 366 608 1.09E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 34 658 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VS_2790 487ba332f50e177ff8949523643b17bf 658 Gene3D G3DSA:3.60.21.10 28 365 3.7E-131 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_2790 487ba332f50e177ff8949523643b17bf 658 Gene3D G3DSA:3.90.780.10 415 597 2.5E-50 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 558 8.0E-19 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_2790 487ba332f50e177ff8949523643b17bf 658 SUPERFAMILY SSF56300 30 365 1.77E-85 T 14-10-2018 VS_2790 487ba332f50e177ff8949523643b17bf 658 Pfam PF00149 Calcineurin-like phosphoesterase 35 270 1.3E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VS_2502 13f4275841ed685dbc925e424971b98d 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.0E-193 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VS_2502 13f4275841ed685dbc925e424971b98d 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 103.853 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VS_2502 13f4275841ed685dbc925e424971b98d 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2502 13f4275841ed685dbc925e424971b98d 431 Gene3D G3DSA:3.40.640.10 69 317 7.2E-176 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2502 13f4275841ed685dbc925e424971b98d 431 Pfam PF00202 Aminotransferase class-III 33 395 2.8E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2502 13f4275841ed685dbc925e424971b98d 431 Gene3D G3DSA:3.90.1150.10 7 419 7.2E-176 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2502 13f4275841ed685dbc925e424971b98d 431 SUPERFAMILY SSF53383 1 423 3.84E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_0158 c40a743b60805cfab7ac1160458410c2 696 Gene3D G3DSA:3.40.50.300 460 633 1.9E-52 T 14-10-2018 VS_0158 c40a743b60805cfab7ac1160458410c2 696 SUPERFAMILY SSF52540 295 656 5.33E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0158 c40a743b60805cfab7ac1160458410c2 696 SMART SM00490 508 592 1.5E-21 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0158 c40a743b60805cfab7ac1160458410c2 696 Pfam PF17191 RecG wedge domain 17 176 4.6E-22 T 14-10-2018 IPR033454 RecG, wedge domain VS_0158 c40a743b60805cfab7ac1160458410c2 696 SUPERFAMILY SSF50249 12 177 1.68E-40 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0158 c40a743b60805cfab7ac1160458410c2 696 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 32 667 5.4E-236 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VS_0158 c40a743b60805cfab7ac1160458410c2 696 Gene3D G3DSA:3.40.50.300 212 453 2.1E-84 T 14-10-2018 VS_0158 c40a743b60805cfab7ac1160458410c2 696 SMART SM00487 268 462 3.3E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_0158 c40a743b60805cfab7ac1160458410c2 696 Pfam PF00271 Helicase conserved C-terminal domain 483 591 5.1E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0158 c40a743b60805cfab7ac1160458410c2 696 Gene3D G3DSA:2.40.50.140 50 142 1.6E-12 T 14-10-2018 VS_0158 c40a743b60805cfab7ac1160458410c2 696 SUPERFAMILY SSF52540 218 456 1.11E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0158 c40a743b60805cfab7ac1160458410c2 696 Pfam PF00270 DEAD/DEAH box helicase 293 436 1.5E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_0867 38eb72e7c90c64e4c67614134a60f783 154 SMART SM00855 2 116 9.6E-4 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VS_0867 38eb72e7c90c64e4c67614134a60f783 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 4.4E-36 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 VS_0867 38eb72e7c90c64e4c67614134a60f783 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 78 2.7E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VS_0867 38eb72e7c90c64e4c67614134a60f783 154 Gene3D G3DSA:3.40.50.1240 1 154 7.8E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VS_0867 38eb72e7c90c64e4c67614134a60f783 154 SUPERFAMILY SSF53254 1 145 6.85E-19 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VS_0867 38eb72e7c90c64e4c67614134a60f783 154 PIRSF PIRSF000709 1 102 0.0052 T 14-10-2018 VS_0392 e8653c381161c84961d3e9ba57601981 470 Gene3D G3DSA:3.40.1380.20 336 467 2.3E-41 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.7E-185 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 SUPERFAMILY SSF52935 323 469 7.06E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 Gene3D G3DSA:3.20.20.60 4 332 5.5E-146 T 14-10-2018 VS_0392 e8653c381161c84961d3e9ba57601981 470 SUPERFAMILY SSF50800 70 167 2.27E-28 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VS_0392 e8653c381161c84961d3e9ba57601981 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 3.3E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 Gene3D G3DSA:2.40.33.10 71 167 5.5E-146 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 9.0E-153 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_0392 e8653c381161c84961d3e9ba57601981 470 SUPERFAMILY SSF51621 1 339 2.02E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_2880 63a925935c91147d46489011cc3b8f92 242 Pfam PF08534 Redoxin 5 160 5.0E-32 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VS_2880 63a925935c91147d46489011cc3b8f92 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VS_2880 63a925935c91147d46489011cc3b8f92 242 SUPERFAMILY SSF52833 2 240 5.1E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2880 63a925935c91147d46489011cc3b8f92 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 8.9E-41 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VS_2880 63a925935c91147d46489011cc3b8f92 242 Pfam PF00462 Glutaredoxin 173 231 2.6E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VS_2880 63a925935c91147d46489011cc3b8f92 242 PRINTS PR00160 Glutaredoxin signature 173 191 2.6E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_2880 63a925935c91147d46489011cc3b8f92 242 PRINTS PR00160 Glutaredoxin signature 228 241 2.6E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_2880 63a925935c91147d46489011cc3b8f92 242 PRINTS PR00160 Glutaredoxin signature 214 227 2.6E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_2880 63a925935c91147d46489011cc3b8f92 242 Gene3D G3DSA:3.40.30.10 4 165 2.9E-61 T 14-10-2018 VS_2880 63a925935c91147d46489011cc3b8f92 242 Gene3D G3DSA:3.40.30.10 171 241 4.5E-23 T 14-10-2018 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 PIRSF PIRSF000006 1 322 5.5E-110 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 2.4E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 2.4E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 Gene3D G3DSA:1.10.760.10 209 295 2.0E-71 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 Gene3D G3DSA:1.10.760.10 132 318 2.0E-71 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 4.2E-24 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 1.8E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 3.6E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 321 3.7E-56 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 SUPERFAMILY SSF46626 55 238 4.87E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 SUPERFAMILY SSF46626 239 321 4.51E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1462 ba8b4e437a90d2254d60d476c31cc07f 324 Gene3D G3DSA:1.20.58.1490 1 93 3.8E-35 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VS_II1208 181c61edd5484b03a741730e91599123 142 Gene3D G3DSA:2.40.70.10 3 133 3.6E-30 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_II1208 181c61edd5484b03a741730e91599123 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 139 1.7E-29 T 14-10-2018 VS_II1208 181c61edd5484b03a741730e91599123 142 SUPERFAMILY SSF50630 6 140 9.14E-39 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_II1259 6330f63b84c8ea1f907c9ec6bbeed569 241 Pfam PF01925 Sulfite exporter TauE/SafE 12 231 4.6E-23 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VS_2877 327012cbc883957cf05a66f1a8426740 349 Gene3D G3DSA:3.30.420.40 191 303 3.9E-40 T 14-10-2018 VS_2877 327012cbc883957cf05a66f1a8426740 349 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 11 337 1.8E-79 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VS_2877 327012cbc883957cf05a66f1a8426740 349 Pfam PF11104 Type IV pilus assembly protein PilM; 16 336 1.8E-40 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VS_2877 327012cbc883957cf05a66f1a8426740 349 PIRSF PIRSF019169 2 339 3.6E-78 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VS_2877 327012cbc883957cf05a66f1a8426740 349 Gene3D G3DSA:3.30.420.40 16 335 3.9E-40 T 14-10-2018 VS_2877 327012cbc883957cf05a66f1a8426740 349 Gene3D G3DSA:3.30.1490.300 90 150 3.9E-40 T 14-10-2018 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 Pfam PF06628 Catalase-related immune-responsive 413 473 5.4E-21 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 ProSitePatterns PS00438 Catalase proximal active site signature. 42 58 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 Gene3D G3DSA:2.40.180.10 1 483 3.3E-237 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 Pfam PF00199 Catalase 6 385 8.6E-190 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 PIRSF PIRSF038928 1 480 1.6E-221 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 SUPERFAMILY SSF56634 4 481 4.19E-215 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 PRINTS PR00067 Catalase signature 103 120 7.0E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 PRINTS PR00067 Catalase signature 19 42 7.0E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 PRINTS PR00067 Catalase signature 122 140 7.0E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 PRINTS PR00067 Catalase signature 82 100 7.0E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 PRINTS PR00067 Catalase signature 287 314 7.0E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 PRINTS PR00067 Catalase signature 319 345 7.0E-71 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 SMART SM01060 6 390 1.7E-286 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_II0148 953f2ff51610fd0d815a4f4791252d54 483 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 332 340 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VS_1375 2a03f19f3b30f722916d1da5547b6479 385 TIGRFAM TIGR02584 cas_NE0113: CRISPR-associated protein, NE0113 family 7 204 1.2E-62 T 14-10-2018 IPR013413 CRISPR-associated protein, NE0113 VS_1375 2a03f19f3b30f722916d1da5547b6479 385 Pfam PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) 15 225 4.5E-50 T 14-10-2018 IPR019092 CRISPR-assoc protein, NE0113/Csx13 VS_1677 59d1019f8dcf220ce43d8e2f2f2304dc 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.7E-134 T 14-10-2018 IPR033752 MetA family VS_1677 59d1019f8dcf220ce43d8e2f2f2304dc 313 Gene3D G3DSA:3.40.50.880 1 301 1.3E-123 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_1677 59d1019f8dcf220ce43d8e2f2f2304dc 313 PIRSF PIRSF000450 1 309 9.8E-146 T 14-10-2018 IPR033752 MetA family VS_1677 59d1019f8dcf220ce43d8e2f2f2304dc 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.297 T 14-10-2018 IPR033752 MetA family VS_1677 59d1019f8dcf220ce43d8e2f2f2304dc 313 SUPERFAMILY SSF52317 17 297 8.74E-101 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_1677 59d1019f8dcf220ce43d8e2f2f2304dc 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 3.3E-162 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 VS_1677 59d1019f8dcf220ce43d8e2f2f2304dc 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-126 T 14-10-2018 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 SUPERFAMILY SSF53633 6 291 1.02E-56 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 SUPERFAMILY SSF55347 601 784 4.84E-46 T 14-10-2018 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Gene3D G3DSA:3.40.50.720 452 799 8.9E-105 T 14-10-2018 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 PIRSF PIRSF000727 5 803 1.9E-286 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 1.4E-13 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Pfam PF00696 Amino acid kinase family 6 274 1.4E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 SUPERFAMILY SSF51735 448 623 9.39E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Gene3D G3DSA:3.40.1160.10 8 290 1.2E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.7E-66 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Pfam PF00742 Homoserine dehydrogenase 601 796 1.9E-43 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Gene3D G3DSA:3.30.360.10 612 782 8.9E-105 T 14-10-2018 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Gene3D G3DSA:1.20.120.1320 44 137 1.2E-72 T 14-10-2018 VS_2893 61fa4ea418f0d2580184a49604a3d0a2 803 Gene3D G3DSA:3.30.2130.10 348 451 2.9E-6 T 14-10-2018 VS_1313 1bab281aeb25964a57b09a9488b5a467 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 320 2.2E-27 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VS_1313 1bab281aeb25964a57b09a9488b5a467 323 SUPERFAMILY SSF53850 104 289 3.39E-9 T 14-10-2018 VS_1313 1bab281aeb25964a57b09a9488b5a467 323 PIRSF PIRSF017082 2 323 4.2E-84 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VS_1313 1bab281aeb25964a57b09a9488b5a467 323 Gene3D G3DSA:3.40.190.10 123 249 1.5E-59 T 14-10-2018 VS_1313 1bab281aeb25964a57b09a9488b5a467 323 Gene3D G3DSA:3.40.190.150 29 314 1.5E-59 T 14-10-2018 VS_0592 107fce0c81a453b7a2fcc0ccdd2670ea 247 Gene3D G3DSA:3.20.20.380 3 247 5.0E-81 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VS_0592 107fce0c81a453b7a2fcc0ccdd2670ea 247 Pfam PF03932 CutC family 4 205 3.1E-76 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VS_0592 107fce0c81a453b7a2fcc0ccdd2670ea 247 SUPERFAMILY SSF110395 5 245 1.02E-67 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VS_0592 107fce0c81a453b7a2fcc0ccdd2670ea 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 29.106 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VS_2273 a716a97b76d51e20901e3d8559aac62c 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 169 1.4E-29 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VS_2273 a716a97b76d51e20901e3d8559aac62c 181 SUPERFAMILY SSF56300 2 172 7.75E-37 T 14-10-2018 VS_2273 a716a97b76d51e20901e3d8559aac62c 181 Gene3D G3DSA:3.60.21.10 1 179 1.2E-64 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_2273 a716a97b76d51e20901e3d8559aac62c 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 163 7.6E-23 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VS_2247 89524c41c85c509e8fb2f09edc9d05eb 115 Gene3D G3DSA:1.20.1300.10 1 115 1.1E-29 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2247 89524c41c85c509e8fb2f09edc9d05eb 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 102 4.1E-6 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2247 89524c41c85c509e8fb2f09edc9d05eb 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 2.5E-35 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VS_2247 89524c41c85c509e8fb2f09edc9d05eb 115 SUPERFAMILY SSF81343 3 114 9.81E-28 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2247 89524c41c85c509e8fb2f09edc9d05eb 115 PIRSF PIRSF000169 1 115 3.2E-39 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VS_0749 964264839a22e177ef316fbdf86eea7f 296 SUPERFAMILY SSF55060 167 283 6.71E-35 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VS_0749 964264839a22e177ef316fbdf86eea7f 296 PIRSF PIRSF010376 9 286 8.7E-90 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VS_0749 964264839a22e177ef316fbdf86eea7f 296 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 278 32.267 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VS_0749 964264839a22e177ef316fbdf86eea7f 296 Gene3D G3DSA:3.30.230.10 2 166 7.0E-57 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_0749 964264839a22e177ef316fbdf86eea7f 296 Pfam PF08544 GHMP kinases C terminal 205 265 1.8E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VS_0749 964264839a22e177ef316fbdf86eea7f 296 Pfam PF00288 GHMP kinases N terminal domain 94 151 2.0E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VS_0749 964264839a22e177ef316fbdf86eea7f 296 Gene3D G3DSA:3.30.70.890 168 286 5.5E-29 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VS_0749 964264839a22e177ef316fbdf86eea7f 296 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 285 1.9E-97 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VS_0749 964264839a22e177ef316fbdf86eea7f 296 SUPERFAMILY SSF54211 11 165 2.73E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 PIRSF PIRSF005457 1 252 3.8E-98 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 163 2.0E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 Gene3D G3DSA:3.60.15.10 1 252 1.8E-92 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 SMART SM00849 12 166 2.5E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 SUPERFAMILY SSF56281 3 252 2.1E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.1E-102 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.531 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VS_2329 d80da663cc105d6cc9ace4721e98fda3 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.2E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VS_2617 d65995729bfe1402960e81bd30579c02 242 Gene3D G3DSA:2.40.50.140 2 79 4.8E-33 T 14-10-2018 VS_2617 d65995729bfe1402960e81bd30579c02 242 Hamap MF_00201 DNA repair protein RecO [recO]. 2 232 22.313 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VS_2617 d65995729bfe1402960e81bd30579c02 242 Gene3D G3DSA:1.20.1440.120 80 237 6.6E-51 T 14-10-2018 VS_2617 d65995729bfe1402960e81bd30579c02 242 Pfam PF11967 Recombination protein O N terminal 6 77 3.3E-23 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VS_2617 d65995729bfe1402960e81bd30579c02 242 SUPERFAMILY SSF50249 6 76 7.2E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2617 d65995729bfe1402960e81bd30579c02 242 SUPERFAMILY SSF57863 87 165 3.4E-11 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VS_2617 d65995729bfe1402960e81bd30579c02 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 229 6.8E-40 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VS_2617 d65995729bfe1402960e81bd30579c02 242 Pfam PF02565 Recombination protein O C terminal 85 226 2.6E-22 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 SUPERFAMILY SSF48179 217 369 5.78E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 218 355 9.0E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 40 360 36.584 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 SUPERFAMILY SSF51735 42 216 2.3E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0205 2443d4df46f7c0563f1c2aa690078254 370 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 276 293 1.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 44 61 1.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 190 1.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 236 260 1.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 94 121 1.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 211 235 1.4E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 PIRSF PIRSF000114 35 370 2.1E-95 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 226 247 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 Gene3D G3DSA:3.40.50.720 27 225 5.9E-51 T 14-10-2018 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 42 196 2.1E-44 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VS_0205 2443d4df46f7c0563f1c2aa690078254 370 Gene3D G3DSA:1.10.1040.10 227 370 6.1E-53 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VS_1379 64f1214f6672b166aeb91ab0baeb3c8d 522 Gene3D G3DSA:3.90.220.20 267 477 1.4E-29 T 14-10-2018 VS_1379 64f1214f6672b166aeb91ab0baeb3c8d 522 Gene3D G3DSA:3.90.220.20 1 211 6.1E-45 T 14-10-2018 VS_1379 64f1214f6672b166aeb91ab0baeb3c8d 522 SUPERFAMILY SSF116734 279 486 5.4E-38 T 14-10-2018 VS_1379 64f1214f6672b166aeb91ab0baeb3c8d 522 SUPERFAMILY SSF116734 3 217 4.41E-41 T 14-10-2018 VS_1379 64f1214f6672b166aeb91ab0baeb3c8d 522 Pfam PF01420 Type I restriction modification DNA specificity domain 298 456 3.8E-17 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VS_1379 64f1214f6672b166aeb91ab0baeb3c8d 522 Pfam PF01420 Type I restriction modification DNA specificity domain 34 190 5.5E-13 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VS_1242 533c8905b45ed7e1bd307ed97bc4ce45 208 Gene3D G3DSA:3.20.20.70 1 208 2.0E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1242 533c8905b45ed7e1bd307ed97bc4ce45 208 SUPERFAMILY SSF51569 3 207 8.24E-66 T 14-10-2018 VS_1242 533c8905b45ed7e1bd307ed97bc4ce45 208 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 205 2.2E-81 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_1242 533c8905b45ed7e1bd307ed97bc4ce45 208 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_1242 533c8905b45ed7e1bd307ed97bc4ce45 208 Pfam PF01081 KDPG and KHG aldolase 5 197 5.5E-70 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_1242 533c8905b45ed7e1bd307ed97bc4ce45 208 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 Gene3D G3DSA:3.40.50.300 1 285 3.0E-85 T 14-10-2018 VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 SMART SM00382 348 522 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 SMART SM00382 31 236 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 SUPERFAMILY SSF52540 9 242 1.4E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 SUPERFAMILY SSF52540 302 527 1.15E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 Pfam PF00005 ABC transporter 340 473 6.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 8.8E-293 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 Gene3D G3DSA:3.40.50.300 286 555 3.0E-77 T 14-10-2018 VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 Pfam PF12848 ABC transporter 230 301 3.2E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0551 dc63d449c1c4b796cb043b37b8ad93de 555 Pfam PF00005 ABC transporter 22 191 8.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2689 c32e3c2bac6b5b94f4189f28cc5f8c09 395 SMART SM00729 10 231 2.1E-53 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_2689 c32e3c2bac6b5b94f4189f28cc5f8c09 395 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 382 6.3E-136 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 VS_2689 c32e3c2bac6b5b94f4189f28cc5f8c09 395 Pfam PF04055 Radical SAM superfamily 15 184 7.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_2689 c32e3c2bac6b5b94f4189f28cc5f8c09 395 SUPERFAMILY SSF102114 6 390 1.7E-111 T 14-10-2018 VS_2689 c32e3c2bac6b5b94f4189f28cc5f8c09 395 Pfam PF06969 HemN C-terminal domain 317 378 3.3E-10 T 14-10-2018 IPR010723 HemN, C-terminal VS_2689 c32e3c2bac6b5b94f4189f28cc5f8c09 395 Gene3D G3DSA:3.80.30.20 2 308 8.4E-96 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VS_II0166 a58dbd97e384f8ad45b0565ea1d60c25 1662 Pfam PF05729 NACHT domain 334 494 1.2E-6 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase VS_II0166 a58dbd97e384f8ad45b0565ea1d60c25 1662 Pfam PF13156 Restriction endonuclease 87 164 6.7E-5 T 14-10-2018 IPR039442 Mrr-like domain VS_3083 ecc0fd3a0b1fa185fabfd3c99530cbaf 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 VS_3083 ecc0fd3a0b1fa185fabfd3c99530cbaf 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 35.236 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 VS_3083 ecc0fd3a0b1fa185fabfd3c99530cbaf 165 Pfam PF08534 Redoxin 20 162 1.6E-25 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VS_3083 ecc0fd3a0b1fa185fabfd3c99530cbaf 165 Gene3D G3DSA:3.40.30.10 1 165 1.9E-45 T 14-10-2018 VS_3083 ecc0fd3a0b1fa185fabfd3c99530cbaf 165 SUPERFAMILY SSF52833 1 163 3.06E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1213 642c40456ad91269471c0a2063420457 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 112 153 1.0E-10 T 14-10-2018 VS_1213 642c40456ad91269471c0a2063420457 153 Gene3D G3DSA:1.20.120.1630 5 153 3.3E-26 T 14-10-2018 VS_1213 642c40456ad91269471c0a2063420457 153 Pfam PF04191 Phospholipid methyltransferase 41 142 4.5E-12 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 Gene3D G3DSA:1.10.10.10 1 97 4.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 8.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 8.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 4.0E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 SUPERFAMILY SSF46785 9 96 4.37E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0532 a8610f8e4d11f1fbcd314a2597f268b4 97 SMART SM00418 15 93 9.6E-29 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_1590 7636d607d7d4579e4b16e56b34de3a2d 137 SUPERFAMILY SSF55811 5 124 1.76E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_1590 7636d607d7d4579e4b16e56b34de3a2d 137 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_1590 7636d607d7d4579e4b16e56b34de3a2d 137 Gene3D G3DSA:3.90.79.10 2 131 8.3E-46 T 14-10-2018 VS_1590 7636d607d7d4579e4b16e56b34de3a2d 137 Pfam PF00293 NUDIX domain 6 118 2.2E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_1590 7636d607d7d4579e4b16e56b34de3a2d 137 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.2E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_1590 7636d607d7d4579e4b16e56b34de3a2d 137 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.2E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_II1271 0fd0b6cec1ce3c3acd9edc38dec77997 299 Pfam PF03466 LysR substrate binding domain 90 289 7.4E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1271 0fd0b6cec1ce3c3acd9edc38dec77997 299 Gene3D G3DSA:3.40.190.290 92 289 2.5E-59 T 14-10-2018 VS_II1271 0fd0b6cec1ce3c3acd9edc38dec77997 299 Gene3D G3DSA:1.10.10.10 4 90 3.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1271 0fd0b6cec1ce3c3acd9edc38dec77997 299 SUPERFAMILY SSF53850 88 292 1.76E-43 T 14-10-2018 VS_II1271 0fd0b6cec1ce3c3acd9edc38dec77997 299 SUPERFAMILY SSF46785 4 112 1.46E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1271 0fd0b6cec1ce3c3acd9edc38dec77997 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0145 8fb19813d4b623e6d55d28b022e4d4d0 259 Pfam PF01203 Type II secretion system (T2SS), protein N 43 254 2.7E-61 T 14-10-2018 IPR022792 Type II secretion system, protein N VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 SMART SM00267 254 426 4.1E-44 T 14-10-2018 IPR000160 GGDEF domain VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 Gene3D G3DSA:3.30.70.270 254 425 3.6E-46 T 14-10-2018 VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 263 423 1.8E-39 T 14-10-2018 IPR000160 GGDEF domain VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 421 1.9E-36 T 14-10-2018 IPR000160 GGDEF domain VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 SUPERFAMILY SSF55785 30 126 1.81E-8 T 14-10-2018 IPR035965 PAS domain superfamily VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 SUPERFAMILY SSF55073 270 423 1.33E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 261 2.7E-7 T 14-10-2018 IPR000014 PAS domain VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 Gene3D G3DSA:3.30.450.20 129 252 8.5E-7 T 14-10-2018 VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 Gene3D G3DSA:3.30.450.20 26 126 4.1E-6 T 14-10-2018 VS_1195 1e111ac67d929b24c8e3bbb0aa8d7d0a 430 SUPERFAMILY SSF55785 130 252 4.76E-7 T 14-10-2018 IPR035965 PAS domain superfamily VS_0128 46b1287342334cdcf42338c44cc2a17e 311 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 7.1E-46 T 14-10-2018 IPR012660 Thioesterase, putative VS_0128 46b1287342334cdcf42338c44cc2a17e 311 Gene3D G3DSA:3.40.630.30 3 145 3.5E-25 T 14-10-2018 VS_0128 46b1287342334cdcf42338c44cc2a17e 311 SUPERFAMILY SSF55729 2 146 5.59E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_0128 46b1287342334cdcf42338c44cc2a17e 311 Gene3D G3DSA:3.10.129.10 147 298 2.3E-47 T 14-10-2018 VS_0128 46b1287342334cdcf42338c44cc2a17e 311 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.3E-53 T 14-10-2018 IPR012660 Thioesterase, putative VS_0128 46b1287342334cdcf42338c44cc2a17e 311 Pfam PF13673 Acetyltransferase (GNAT) domain 54 142 4.1E-9 T 14-10-2018 IPR000182 GNAT domain VS_0128 46b1287342334cdcf42338c44cc2a17e 311 SUPERFAMILY SSF54637 154 296 1.03E-39 T 14-10-2018 IPR029069 HotDog domain superfamily VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 4.6E-97 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 Gene3D G3DSA:1.10.8.10 15 105 5.3E-6 T 14-10-2018 VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 PIRSF PIRSF037167 2 307 2.7E-149 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 SUPERFAMILY SSF53335 16 294 6.93E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.135 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 6.4E-138 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 Gene3D G3DSA:3.40.50.150 106 283 2.1E-46 T 14-10-2018 VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_0869 4010fb68d415b0307ce896ecf64bee1e 310 Pfam PF05175 Methyltransferase small domain 134 216 1.9E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VS_0664 1f8915258e335fccbf6215c14f611924 1304 Gene3D G3DSA:3.90.650.10 423 607 6.2E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 Gene3D G3DSA:3.90.650.10 809 989 1.7E-31 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1302 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_0664 1f8915258e335fccbf6215c14f611924 1304 SUPERFAMILY SSF82697 1 151 4.66E-49 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_0664 1f8915258e335fccbf6215c14f611924 1304 Gene3D G3DSA:3.30.1330.10 215 422 2.0E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 SUPERFAMILY SSF109736 155 221 1.57E-20 T 14-10-2018 VS_0664 1f8915258e335fccbf6215c14f611924 1304 SMART SM01211 1048 1303 3.4E-156 T 14-10-2018 VS_0664 1f8915258e335fccbf6215c14f611924 1304 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1304 21.363 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_0664 1f8915258e335fccbf6215c14f611924 1304 SUPERFAMILY SSF56042 433 616 1.94E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 Gene3D G3DSA:3.40.50.880 990 1304 3.3E-140 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0664 1f8915258e335fccbf6215c14f611924 1304 SUPERFAMILY SSF56042 825 1042 1.94E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 Gene3D G3DSA:3.30.1330.10 615 808 5.4E-25 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 SUPERFAMILY SSF52317 1045 1303 7.26E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0664 1f8915258e335fccbf6215c14f611924 1304 SUPERFAMILY SSF55326 222 429 2.51E-65 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 Gene3D G3DSA:1.10.8.750 153 214 1.1E-26 T 14-10-2018 VS_0664 1f8915258e335fccbf6215c14f611924 1304 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1048 1301 2.2E-106 T 14-10-2018 VS_0664 1f8915258e335fccbf6215c14f611924 1304 SUPERFAMILY SSF55326 619 817 4.71E-70 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_0664 1f8915258e335fccbf6215c14f611924 1304 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 6.6E-27 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VS_0664 1f8915258e335fccbf6215c14f611924 1304 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 975 6.0E-16 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 Pfam PF01131 DNA topoisomerase 160 600 9.4E-114 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 Gene3D G3DSA:1.10.460.10 163 607 1.9E-165 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 Pfam PF01751 Toprim domain 4 124 3.9E-15 T 14-10-2018 IPR006171 TOPRIM domain VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 SMART SM00436 129 224 2.6E-29 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 SUPERFAMILY SSF56712 3 613 2.75E-182 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 649 63.32 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 SMART SM00437 284 565 2.8E-84 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 Gene3D G3DSA:3.40.50.140 2 157 1.6E-60 T 14-10-2018 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 Gene3D G3DSA:2.70.20.10 218 495 1.9E-165 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 Gene3D G3DSA:1.10.290.10 293 422 1.9E-165 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 630 1.8E-235 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 SMART SM00493 2 125 1.8E-30 T 14-10-2018 IPR006171 TOPRIM domain VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 1.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 1.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 1.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_0940 fadee7c0b358cd13038b18b2c75917f6 663 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 528 542 1.8E-25 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 SUPERFAMILY SSF101353 255 462 6.41E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Gene3D G3DSA:3.10.310.40 749 857 7.7E-33 T 14-10-2018 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 5.0E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 SMART SM00863 652 695 7.1E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Gene3D G3DSA:3.30.980.10 562 696 2.1E-50 T 14-10-2018 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.0E-226 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Gene3D G3DSA:3.30.54.20 623 676 2.1E-50 T 14-10-2018 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Pfam PF02272 DHHA1 domain 723 855 4.7E-27 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 196.329 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 SUPERFAMILY SSF55681 3 254 7.7E-108 T 14-10-2018 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Gene3D G3DSA:3.30.930.10 2 251 1.8E-119 T 14-10-2018 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 SUPERFAMILY SSF55186 551 715 2.22E-52 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 SUPERFAMILY SSF50447 454 551 4.59E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2583 3f7c9b9d7e9fc35dd4268d51ea0830d8 860 Gene3D G3DSA:2.40.30.130 466 551 3.2E-10 T 14-10-2018 VS_II0638 c7d4dd799e060232337956ecc2ce379c 334 SUPERFAMILY SSF53383 1 332 2.55E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0638 c7d4dd799e060232337956ecc2ce379c 334 Pfam PF01212 Beta-eliminating lyase 2 283 2.1E-96 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VS_II0638 c7d4dd799e060232337956ecc2ce379c 334 Gene3D G3DSA:3.90.1150.10 244 334 4.3E-21 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0638 c7d4dd799e060232337956ecc2ce379c 334 PIRSF PIRSF017617 1 334 5.9E-131 T 14-10-2018 IPR023603 Threonine aldolase VS_II0638 c7d4dd799e060232337956ecc2ce379c 334 Gene3D G3DSA:3.40.640.10 1 243 3.6E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1648 5caf0bd8fc30c1a2c5671c25d66e10cf 1044 SUPERFAMILY SSF52540 166 631 1.31E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1648 5caf0bd8fc30c1a2c5671c25d66e10cf 1044 Pfam PF00176 SNF2 family N-terminal domain 139 395 1.6E-14 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VS_1648 5caf0bd8fc30c1a2c5671c25d66e10cf 1044 Pfam PF00271 Helicase conserved C-terminal domain 515 620 2.3E-16 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1648 5caf0bd8fc30c1a2c5671c25d66e10cf 1044 Gene3D G3DSA:3.40.50.10810 117 394 2.3E-66 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VS_1648 5caf0bd8fc30c1a2c5671c25d66e10cf 1044 SMART SM00490 531 620 5.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1648 5caf0bd8fc30c1a2c5671c25d66e10cf 1044 SMART SM00487 115 329 3.9E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1648 5caf0bd8fc30c1a2c5671c25d66e10cf 1044 Gene3D G3DSA:3.40.50.300 430 640 1.6E-35 T 14-10-2018 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 28 510 5.0E-96 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 SUPERFAMILY SSF55486 21 511 2.32E-116 T 14-10-2018 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 282 301 1.9E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 348 367 1.9E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 462 480 1.9E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 166 186 1.9E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 418 439 1.9E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 262 281 1.9E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 309 325 1.9E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 Gene3D G3DSA:1.10.1370.30 20 511 2.5E-194 T 14-10-2018 VS_1289 8a32695f4b3777242a664c7bdcf64d1f 511 PIRSF PIRSF006615 20 511 3.5E-196 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VS_II1295 0cbc26b20926bc36bdc43ec62e557db0 335 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 52 124 5.2E-21 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain VS_II1295 0cbc26b20926bc36bdc43ec62e557db0 335 PIRSF PIRSF026760 3 335 1.6E-99 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 VS_II1295 0cbc26b20926bc36bdc43ec62e557db0 335 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 4.7E-70 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop VS_II1295 0cbc26b20926bc36bdc43ec62e557db0 335 SUPERFAMILY SSF52540 2 332 1.13E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1295 0cbc26b20926bc36bdc43ec62e557db0 335 Gene3D G3DSA:3.40.50.720 51 126 2.8E-19 T 14-10-2018 VS_II1295 0cbc26b20926bc36bdc43ec62e557db0 335 Gene3D G3DSA:3.40.50.300 127 333 1.4E-72 T 14-10-2018 VS_3017 5dd6e5f12bd76d572a08585f7f699e74 106 Gene3D G3DSA:3.40.250.10 1 102 7.8E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_3017 5dd6e5f12bd76d572a08585f7f699e74 106 Pfam PF00581 Rhodanese-like domain 12 96 9.1E-9 T 14-10-2018 IPR001763 Rhodanese-like domain VS_3017 5dd6e5f12bd76d572a08585f7f699e74 106 SMART SM00450 7 102 5.0E-14 T 14-10-2018 IPR001763 Rhodanese-like domain VS_3017 5dd6e5f12bd76d572a08585f7f699e74 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 29.886 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VS_3017 5dd6e5f12bd76d572a08585f7f699e74 106 SUPERFAMILY SSF52821 1 104 4.19E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_0025 58aa69a34520a224e89948944ce7cd46 260 Gene3D G3DSA:1.25.40.10 17 235 8.0E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0025 58aa69a34520a224e89948944ce7cd46 260 SUPERFAMILY SSF48452 62 182 2.92E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1750 40522cac587e2e0cfc3f5466db5ebad2 212 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 36 212 3.0E-76 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_1750 40522cac587e2e0cfc3f5466db5ebad2 212 Gene3D G3DSA:1.10.286.10 1 82 2.6E-32 T 14-10-2018 VS_1750 40522cac587e2e0cfc3f5466db5ebad2 212 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 142 152 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_1750 40522cac587e2e0cfc3f5466db5ebad2 212 SUPERFAMILY SSF55620 7 211 9.64E-70 T 14-10-2018 VS_1750 40522cac587e2e0cfc3f5466db5ebad2 212 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 32 212 30.713 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_1750 40522cac587e2e0cfc3f5466db5ebad2 212 Pfam PF01227 GTP cyclohydrolase I 40 211 1.6E-60 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VS_1750 40522cac587e2e0cfc3f5466db5ebad2 212 Gene3D G3DSA:3.30.1130.10 83 212 1.7E-50 T 14-10-2018 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 5.6E-70 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.288 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 Gene3D G3DSA:2.40.50.140 1 124 5.4E-63 T 14-10-2018 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 Pfam PF00164 Ribosomal protein S12/S23 14 123 3.6E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 PIRSF PIRSF002133 1 124 1.0E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 SUPERFAMILY SSF50249 3 123 8.05E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2837 98ebac326f72b1b849c5051d0c880d04 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2837 98ebac326f72b1b849c5051d0c880d04 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_II0112 b191ea5b2b346faddb6066a9e42cd9f6 78 Pfam PF04325 Protein of unknown function (DUF465) 29 75 5.3E-10 T 14-10-2018 IPR007420 Protein of unknown function DUF465 VS_II0112 b191ea5b2b346faddb6066a9e42cd9f6 78 Gene3D G3DSA:1.20.58.660 11 78 2.5E-13 T 14-10-2018 VS_II0354 a9756bec60f2a90c17c1da65f761be1a 104 Pfam PF01541 GIY-YIG catalytic domain 10 81 2.4E-17 T 14-10-2018 IPR000305 GIY-YIG endonuclease VS_II0354 a9756bec60f2a90c17c1da65f761be1a 104 SMART SM00465 8 87 0.0074 T 14-10-2018 IPR000305 GIY-YIG endonuclease VS_II0354 a9756bec60f2a90c17c1da65f761be1a 104 Gene3D G3DSA:3.40.1440.10 4 101 6.3E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VS_II0354 a9756bec60f2a90c17c1da65f761be1a 104 SUPERFAMILY SSF82771 10 80 9.81E-16 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VS_0909 c217531e5dfadcf7f1f1debb79f3ba45 295 Gene3D G3DSA:1.10.10.10 5 93 3.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0909 c217531e5dfadcf7f1f1debb79f3ba45 295 SUPERFAMILY SSF53850 92 292 1.21E-37 T 14-10-2018 VS_0909 c217531e5dfadcf7f1f1debb79f3ba45 295 Pfam PF03466 LysR substrate binding domain 92 290 1.1E-40 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0909 c217531e5dfadcf7f1f1debb79f3ba45 295 SUPERFAMILY SSF46785 5 88 5.55E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0909 c217531e5dfadcf7f1f1debb79f3ba45 295 Gene3D G3DSA:3.40.190.290 94 295 2.0E-74 T 14-10-2018 VS_0909 c217531e5dfadcf7f1f1debb79f3ba45 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.3E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 Hamap MF_00456 Glutamate 5-kinase [proB]. 29 283 36.069 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 Pfam PF01472 PUA domain 301 375 1.1E-22 T 14-10-2018 IPR002478 PUA domain GO:0003723 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 Gene3D G3DSA:2.30.130.10 290 392 9.1E-34 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 SUPERFAMILY SSF88697 301 391 4.31E-25 T 14-10-2018 IPR015947 PUA-like superfamily VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 Pfam PF00696 Amino acid kinase family 29 258 9.4E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 Gene3D G3DSA:3.40.1160.10 20 289 1.8E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 SMART SM00359 301 384 1.4E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 PRINTS PR00474 Glutamate 5-kinase family signature 140 161 4.0E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 PRINTS PR00474 Glutamate 5-kinase family signature 233 253 4.0E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 PRINTS PR00474 Glutamate 5-kinase family signature 172 199 4.0E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 PRINTS PR00474 Glutamate 5-kinase family signature 66 80 4.0E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 PRINTS PR00474 Glutamate 5-kinase family signature 100 128 4.0E-54 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 SUPERFAMILY SSF53633 29 280 1.1E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 PIRSF PIRSF000729 24 393 2.5E-138 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 TIGRFAM TIGR01027 proB: glutamate 5-kinase 29 390 2.3E-148 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VS_2416 a63764d26aa4f17b70535b3a144ebcab 394 ProSitePatterns PS00902 Glutamate 5-kinase signature. 231 248 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 424 434 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 434 2.2E-127 T 14-10-2018 VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 98 439 1.3E-31 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 SUPERFAMILY SSF50249 18 74 1.6E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 Pfam PF01938 TRAM domain 16 67 4.0E-12 T 14-10-2018 IPR002792 TRAM domain VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 Gene3D G3DSA:2.40.50.140 1 88 7.8E-29 T 14-10-2018 VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 Gene3D G3DSA:3.40.1350.30 135 274 4.6E-114 T 14-10-2018 VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 SUPERFAMILY SSF53335 77 441 5.82E-84 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 442 62.992 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VS_2612 85441b0ae62c7ae6af1c66faf189a5fc 442 Gene3D G3DSA:3.40.50.150 89 436 4.6E-114 T 14-10-2018 VS_1175 0d7443baa3cee1e40b200af4e365fe9d 395 SMART SM00631 133 368 6.2E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VS_1175 0d7443baa3cee1e40b200af4e365fe9d 395 Pfam PF00246 Zinc carboxypeptidase 145 362 1.4E-21 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VS_1175 0d7443baa3cee1e40b200af4e365fe9d 395 Gene3D G3DSA:3.40.630.10 134 395 2.0E-70 T 14-10-2018 VS_1175 0d7443baa3cee1e40b200af4e365fe9d 395 SUPERFAMILY SSF53187 126 393 6.95E-60 T 14-10-2018 VS_1175 0d7443baa3cee1e40b200af4e365fe9d 395 Gene3D G3DSA:2.60.40.3120 12 133 1.2E-43 T 14-10-2018 VS_II0204 358436b6b2a10fccbfd4802fce0b39e8 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 362 525 2.4E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0204 358436b6b2a10fccbfd4802fce0b39e8 560 Gene3D G3DSA:1.10.287.950 231 560 3.1E-71 T 14-10-2018 VS_II0204 358436b6b2a10fccbfd4802fce0b39e8 560 SUPERFAMILY SSF58104 252 560 4.97E-71 T 14-10-2018 VS_II0204 358436b6b2a10fccbfd4802fce0b39e8 560 SMART SM00304 231 283 4.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0204 358436b6b2a10fccbfd4802fce0b39e8 560 Pfam PF00672 HAMP domain 233 279 7.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0204 358436b6b2a10fccbfd4802fce0b39e8 560 SMART SM00283 298 559 1.4E-61 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0687 67c8460a3acee38a662b441514bb14ba 448 Pfam PF14344 Domain of unknown function (DUF4397) 28 150 3.5E-17 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 VS_0687 67c8460a3acee38a662b441514bb14ba 448 Pfam PF14344 Domain of unknown function (DUF4397) 244 365 5.2E-18 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 VS_0687 67c8460a3acee38a662b441514bb14ba 448 Pfam PF14344 Domain of unknown function (DUF4397) 135 225 1.2E-10 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 VS_II1353 011a37496e0ced8e075a449a0d78ed84 228 Pfam PF03352 Methyladenine glycosylase 47 136 3.9E-14 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VS_II1353 011a37496e0ced8e075a449a0d78ed84 228 SUPERFAMILY SSF48150 39 184 2.35E-37 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VS_II1353 011a37496e0ced8e075a449a0d78ed84 228 Gene3D G3DSA:1.10.340.30 36 163 3.6E-17 T 14-10-2018 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 1.9E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 Pfam PF07687 Peptidase dimerisation domain 211 296 2.4E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 4.2E-177 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 PIRSF PIRSF016599 5 489 1.8E-213 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 Gene3D G3DSA:3.40.630.10 1 244 7.5E-65 T 14-10-2018 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 Gene3D G3DSA:3.40.630.10 376 490 4.7E-24 T 14-10-2018 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 8.5E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VS_2422 e639a7dcb60d0c6662adb92ab54240dd 490 SUPERFAMILY SSF53187 16 486 6.55E-63 T 14-10-2018 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 2.5E-44 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 Gene3D G3DSA:3.40.630.10 9 364 6.1E-124 T 14-10-2018 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 SUPERFAMILY SSF55031 181 291 8.22E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VS_2301 7a1cab775506e7ae99d188116a2d2272 378 SUPERFAMILY SSF53187 6 375 7.33E-64 T 14-10-2018 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.454 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 Gene3D G3DSA:3.30.70.360 181 294 6.1E-124 T 14-10-2018 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 2.9E-174 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VS_2301 7a1cab775506e7ae99d188116a2d2272 378 Pfam PF07687 Peptidase dimerisation domain 177 284 5.3E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VS_1700 a50e342c348c8c041b78bcb17d9b35cb 205 Gene3D G3DSA:3.40.50.300 19 193 1.4E-54 T 14-10-2018 VS_1700 a50e342c348c8c041b78bcb17d9b35cb 205 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 20 192 1.3E-56 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VS_1700 a50e342c348c8c041b78bcb17d9b35cb 205 SUPERFAMILY SSF52540 19 193 2.24E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1700 a50e342c348c8c041b78bcb17d9b35cb 205 PIRSF PIRSF006135 17 195 1.5E-53 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VS_II0733 d44e4945feffb4036630ce15e758f7e6 465 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 4.4E-200 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VS_II0733 d44e4945feffb4036630ce15e758f7e6 465 Gene3D G3DSA:3.40.50.1220 289 465 9.4E-88 T 14-10-2018 VS_II0733 d44e4945feffb4036630ce15e758f7e6 465 PIRSF PIRSF000204 1 465 4.3E-233 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VS_II0733 d44e4945feffb4036630ce15e758f7e6 465 SUPERFAMILY SSF52467 292 463 8.18E-78 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VS_1002 562f34143bf755f9b06b5bad2ee95c01 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.139 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VS_1002 562f34143bf755f9b06b5bad2ee95c01 318 SUPERFAMILY SSF51395 1 313 7.51E-71 T 14-10-2018 VS_1002 562f34143bf755f9b06b5bad2ee95c01 318 PIRSF PIRSF006621 1 317 1.7E-74 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_1002 562f34143bf755f9b06b5bad2ee95c01 318 Gene3D G3DSA:3.20.20.70 1 242 7.7E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1002 562f34143bf755f9b06b5bad2ee95c01 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_1002 562f34143bf755f9b06b5bad2ee95c01 318 Gene3D G3DSA:1.20.225.30 243 314 9.8E-25 T 14-10-2018 VS_1002 562f34143bf755f9b06b5bad2ee95c01 318 Pfam PF01207 Dihydrouridine synthase (Dus) 5 296 1.2E-73 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_0966 b2e6445ccb5491ee4a1bc3f89c3b1df8 441 Pfam PF03553 Na+/H+ antiporter family 150 435 5.8E-76 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VS_0966 b2e6445ccb5491ee4a1bc3f89c3b1df8 441 Pfam PF13726 Na+-H+ antiporter family 2 88 3.6E-33 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VS_0966 b2e6445ccb5491ee4a1bc3f89c3b1df8 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 6.5E-6 T 14-10-2018 VS_0966 b2e6445ccb5491ee4a1bc3f89c3b1df8 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 6.5E-6 T 14-10-2018 VS_0216 df61680733cb2934574b52591726aa4b 265 Pfam PF00793 DAHP synthetase I family 2 254 5.2E-58 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_0216 df61680733cb2934574b52591726aa4b 265 SUPERFAMILY SSF51569 1 257 3.94E-96 T 14-10-2018 VS_0216 df61680733cb2934574b52591726aa4b 265 Gene3D G3DSA:3.20.20.70 1 263 1.6E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0216 df61680733cb2934574b52591726aa4b 265 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 1 255 1.5E-111 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 344 6.6E-37 T 14-10-2018 IPR000160 GGDEF domain VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 Gene3D G3DSA:3.30.450.40 4 171 7.4E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 Gene3D G3DSA:3.30.70.270 172 346 2.0E-46 T 14-10-2018 VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 SUPERFAMILY SSF55781 32 175 6.54E-17 T 14-10-2018 VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 343 8.8E-37 T 14-10-2018 IPR000160 GGDEF domain VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 SUPERFAMILY SSF55073 187 345 3.84E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 Pfam PF01590 GAF domain 39 162 1.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_1685 e615fc8d5e155d493b960cf8bbb2efc0 356 SMART SM00267 171 347 3.7E-51 T 14-10-2018 IPR000160 GGDEF domain VS_II0657 1c42f42d370d1634504e3e537a8e03e9 388 PIRSF PIRSF000294 8 379 2.4E-71 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VS_II0657 1c42f42d370d1634504e3e537a8e03e9 388 SUPERFAMILY SSF46626 37 182 6.95E-37 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0657 1c42f42d370d1634504e3e537a8e03e9 388 Gene3D G3DSA:1.10.760.10 45 363 1.2E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0657 1c42f42d370d1634504e3e537a8e03e9 388 Gene3D G3DSA:1.10.760.10 183 362 1.2E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0657 1c42f42d370d1634504e3e537a8e03e9 388 SUPERFAMILY SSF46626 173 358 1.93E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0657 1c42f42d370d1634504e3e537a8e03e9 388 Pfam PF03150 Di-haem cytochrome c peroxidase 49 196 3.3E-35 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VS_II0589 f30d2176e8ef321fc77b3c58bcbba0c8 435 SUPERFAMILY SSF55874 300 427 1.19E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0589 f30d2176e8ef321fc77b3c58bcbba0c8 435 SUPERFAMILY SSF47384 216 294 2.94E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0589 f30d2176e8ef321fc77b3c58bcbba0c8 435 Gene3D G3DSA:1.10.287.130 187 297 5.2E-14 T 14-10-2018 VS_II0589 f30d2176e8ef321fc77b3c58bcbba0c8 435 Gene3D G3DSA:3.30.565.10 300 434 2.6E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0589 f30d2176e8ef321fc77b3c58bcbba0c8 435 SMART SM00388 232 297 1.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0589 f30d2176e8ef321fc77b3c58bcbba0c8 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 294 1.2E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 556 617 6.7E-6 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 SMART SM00642 122 541 1.6E-80 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 PIRSF PIRSF001024 94 622 1.9E-52 T 14-10-2018 IPR013777 Alpha-amylase-like GO:0004556|GO:0005509|GO:0005975 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 SUPERFAMILY SSF51445 111 547 2.83E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 SUPERFAMILY SSF51011 550 626 1.15E-16 T 14-10-2018 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 SMART SM00632 553 628 1.5E-9 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 Gene3D G3DSA:3.20.20.80 112 543 9.7E-107 T 14-10-2018 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 Pfam PF00128 Alpha amylase, catalytic domain 157 504 3.9E-60 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_2585 489a41973434c2e51e01b32e8f4d66e8 629 Gene3D G3DSA:2.60.40.1180 545 628 1.4E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 SUPERFAMILY SSF50891 2 162 4.38E-55 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 Gene3D G3DSA:2.40.100.10 1 163 1.6E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.3E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.3E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.3E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 4.0E-45 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VS_2092 ca453ae2d883a3b655848c41bfb9866f 164 PIRSF PIRSF001467 1 163 1.6E-24 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.3E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Gene3D G3DSA:2.40.30.10 186 284 1.6E-33 T 14-10-2018 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Pfam PF00679 Elongation factor G C-terminus 399 482 3.4E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Gene3D G3DSA:3.30.70.3380 368 478 2.5E-39 T 14-10-2018 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 SUPERFAMILY SSF54980 399 493 4.8E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 304.434 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 3.4E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Gene3D G3DSA:3.40.50.300 1 185 2.1E-71 T 14-10-2018 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 SUPERFAMILY SSF54980 292 370 1.62E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 SUPERFAMILY SSF50447 165 288 4.37E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 3.4E-299 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 SMART SM00838 398 486 0.0042 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 SUPERFAMILY SSF52540 2 205 1.9E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.3E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Gene3D G3DSA:3.30.70.2570 479 553 1.2E-31 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.3E-48 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VS_2621 a24ed63e5d53bd7970770c229e8bb7ae 597 Gene3D G3DSA:3.30.70.870 286 367 9.0E-36 T 14-10-2018 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 SUPERFAMILY SSF50486 208 316 1.96E-30 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 SUPERFAMILY SSF53328 5 207 8.37E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 Gene3D G3DSA:3.40.50.170 1 209 2.1E-87 T 14-10-2018 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 Pfam PF00551 Formyl transferase 6 183 2.4E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 312 37.223 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 Pfam PF02911 Formyl transferase, C-terminal domain 207 309 2.5E-28 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 Gene3D G3DSA:3.10.25.10 210 320 5.7E-36 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_3127 2599d02d104e73585b5808cfa7d43ee9 321 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 317 7.3E-107 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 Gene3D G3DSA:3.40.50.2300 752 892 8.1E-32 T 14-10-2018 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 SMART SM00387 583 692 1.3E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0260 21e9f1f56659155e29cd122110c57b13 892 Gene3D G3DSA:1.10.287.130 425 532 2.9E-6 T 14-10-2018 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 SUPERFAMILY SSF55874 542 692 1.24E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0260 21e9f1f56659155e29cd122110c57b13 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 650 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 636 2.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 SUPERFAMILY SSF47384 458 518 2.55E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 Pfam PF00072 Response regulator receiver domain 765 872 5.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 SUPERFAMILY SSF52172 763 882 1.02E-29 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0260 21e9f1f56659155e29cd122110c57b13 892 SMART SM00388 467 536 1.8E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0260 21e9f1f56659155e29cd122110c57b13 892 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 590 689 2.3E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0260 21e9f1f56659155e29cd122110c57b13 892 Gene3D G3DSA:3.30.565.10 538 696 2.3E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0260 21e9f1f56659155e29cd122110c57b13 892 SMART SM00448 763 873 3.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1049 965a5ecd9acd87f696fffec0a400ec4f 166 SUPERFAMILY SSF116960 1 166 2.48E-63 T 14-10-2018 VS_1049 965a5ecd9acd87f696fffec0a400ec4f 166 Gene3D G3DSA:1.10.3190.10 54 166 1.4E-36 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VS_1049 965a5ecd9acd87f696fffec0a400ec4f 166 Gene3D G3DSA:1.10.287.680 1 53 4.0E-32 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VS_1049 965a5ecd9acd87f696fffec0a400ec4f 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 38.078 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VS_1049 965a5ecd9acd87f696fffec0a400ec4f 166 PIRSF PIRSF006272 1 166 1.1E-77 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VS_1049 965a5ecd9acd87f696fffec0a400ec4f 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 1.0E-84 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VS_1049 965a5ecd9acd87f696fffec0a400ec4f 166 Pfam PF03887 YfbU domain 1 166 3.3E-69 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VS_2904 7b350c22bf1436afc38c9079eba85ac4 172 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 1.7E-81 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VS_2904 7b350c22bf1436afc38c9079eba85ac4 172 SUPERFAMILY SSF89562 2 158 9.03E-46 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VS_2904 7b350c22bf1436afc38c9079eba85ac4 172 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.9E-67 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VS_2904 7b350c22bf1436afc38c9079eba85ac4 172 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.771 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VS_2904 7b350c22bf1436afc38c9079eba85ac4 172 Gene3D G3DSA:3.50.30.40 1 161 1.3E-59 T 14-10-2018 VS_2904 7b350c22bf1436afc38c9079eba85ac4 172 Pfam PF03737 Aldolase/RraA 6 152 1.4E-37 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VS_1163 f27251e10dec733d5e50a6d636c53986 566 Gene3D G3DSA:1.10.3720.10 46 275 8.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily VS_1163 f27251e10dec733d5e50a6d636c53986 566 SUPERFAMILY SSF161098 300 537 2.73E-24 T 14-10-2018 IPR035906 MetI-like superfamily VS_1163 f27251e10dec733d5e50a6d636c53986 566 Gene3D G3DSA:1.10.3720.10 294 546 2.5E-19 T 14-10-2018 IPR035906 MetI-like superfamily VS_1163 f27251e10dec733d5e50a6d636c53986 566 SUPERFAMILY SSF161098 5 274 1.53E-24 T 14-10-2018 IPR035906 MetI-like superfamily VS_1025 e543147dd1524856f0dbe7e916405014 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 4.7E-36 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VS_1025 e543147dd1524856f0dbe7e916405014 77 Gene3D G3DSA:1.10.1200.10 1 76 2.2E-29 T 14-10-2018 IPR036736 ACP-like superfamily VS_1025 e543147dd1524856f0dbe7e916405014 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.652 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VS_1025 e543147dd1524856f0dbe7e916405014 77 SUPERFAMILY SSF47336 2 76 3.27E-23 T 14-10-2018 IPR036736 ACP-like superfamily VS_1025 e543147dd1524856f0dbe7e916405014 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VS_1025 e543147dd1524856f0dbe7e916405014 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 3.0E-11 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VS_1025 e543147dd1524856f0dbe7e916405014 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.1E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VS_0275 9fb3415df3487714ef24f31385aec1f4 438 SMART SM00788 4 431 5.9E-301 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 Gene3D G3DSA:3.90.170.10 267 438 1.1E-65 T 14-10-2018 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 Gene3D G3DSA:1.10.300.10 102 201 5.3E-107 T 14-10-2018 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 3.2E-191 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 217.147 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 Gene3D G3DSA:3.40.440.10 6 249 5.3E-107 T 14-10-2018 VS_0275 9fb3415df3487714ef24f31385aec1f4 438 SUPERFAMILY SSF52540 3 434 1.01E-177 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0275 9fb3415df3487714ef24f31385aec1f4 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 1.1E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_II0265 5f400d643da895295b427deb1967bb56 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0265 5f400d643da895295b427deb1967bb56 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0265 5f400d643da895295b427deb1967bb56 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0265 5f400d643da895295b427deb1967bb56 317 SUPERFAMILY SSF46785 2 85 1.72E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0265 5f400d643da895295b427deb1967bb56 317 SUPERFAMILY SSF53850 90 307 4.34E-33 T 14-10-2018 VS_II0265 5f400d643da895295b427deb1967bb56 317 Gene3D G3DSA:1.10.10.10 1 88 5.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0265 5f400d643da895295b427deb1967bb56 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0265 5f400d643da895295b427deb1967bb56 317 Gene3D G3DSA:3.40.190.10 170 279 1.5E-50 T 14-10-2018 VS_II0265 5f400d643da895295b427deb1967bb56 317 Pfam PF03466 LysR substrate binding domain 95 307 3.7E-11 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0265 5f400d643da895295b427deb1967bb56 317 Gene3D G3DSA:3.40.190.10 94 303 1.5E-50 T 14-10-2018 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 Gene3D G3DSA:2.70.210.12 1 158 1.4E-56 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VS_0363 9d467a6b7cb5259d54b153ae86800853 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.612 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 9.5E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 PIRSF PIRSF002401 1 375 8.7E-134 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type VS_0363 9d467a6b7cb5259d54b153ae86800853 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.2E-140 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 Gene3D G3DSA:3.40.50.300 159 335 9.9E-50 T 14-10-2018 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.3E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 SUPERFAMILY SSF82051 2 157 3.53E-53 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VS_0363 9d467a6b7cb5259d54b153ae86800853 390 SUPERFAMILY SSF52540 151 341 7.07E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0363 9d467a6b7cb5259d54b153ae86800853 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VS_0363 9d467a6b7cb5259d54b153ae86800853 390 Pfam PF01018 GTP1/OBG 4 156 1.6E-54 T 14-10-2018 IPR006169 GTP1/OBG domain VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 Gene3D G3DSA:3.90.79.10 220 346 1.3E-14 T 14-10-2018 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 165 7.4E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 SMART SM00525 189 209 3.4E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 Pfam PF14815 NUDIX domain 231 343 8.3E-23 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 SUPERFAMILY SSF55811 218 345 6.09E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 Gene3D G3DSA:1.10.340.30 19 130 2.8E-86 T 14-10-2018 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 Pfam PF00633 Helix-hairpin-helix motif 98 125 1.1E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 SUPERFAMILY SSF48150 3 223 1.33E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 SMART SM00478 37 188 5.7E-46 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 266 6.2E-125 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 Gene3D G3DSA:1.10.1670.10 7 209 2.8E-86 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VS_2692 2b4dd59737af488fe31afa5fe9a09d88 352 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VS_1498 1928823497badeeb0b390df84b98f3f8 509 SMART SM00382 203 349 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1498 1928823497badeeb0b390df84b98f3f8 509 Gene3D G3DSA:3.40.50.2300 42 173 1.3E-28 T 14-10-2018 VS_1498 1928823497badeeb0b390df84b98f3f8 509 Pfam PF02954 Bacterial regulatory protein, Fis family 459 498 1.8E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_1498 1928823497badeeb0b390df84b98f3f8 509 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 395 404 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_1498 1928823497badeeb0b390df84b98f3f8 509 SUPERFAMILY SSF52172 44 227 7.4E-35 T 14-10-2018 IPR011006 CheY-like superfamily VS_1498 1928823497badeeb0b390df84b98f3f8 509 SUPERFAMILY SSF46689 452 501 4.93E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1498 1928823497badeeb0b390df84b98f3f8 509 Gene3D G3DSA:1.10.8.60 354 430 1.7E-15 T 14-10-2018 VS_1498 1928823497badeeb0b390df84b98f3f8 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 268 283 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_1498 1928823497badeeb0b390df84b98f3f8 509 Pfam PF00072 Response regulator receiver domain 46 155 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1498 1928823497badeeb0b390df84b98f3f8 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 207 220 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_1498 1928823497badeeb0b390df84b98f3f8 509 SUPERFAMILY SSF52540 182 412 4.22E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1498 1928823497badeeb0b390df84b98f3f8 509 Gene3D G3DSA:1.10.10.60 449 499 1.2E-12 T 14-10-2018 VS_1498 1928823497badeeb0b390df84b98f3f8 509 Pfam PF00158 Sigma-54 interaction domain 183 348 3.6E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_1498 1928823497badeeb0b390df84b98f3f8 509 SMART SM00448 44 155 4.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1498 1928823497badeeb0b390df84b98f3f8 509 Gene3D G3DSA:3.40.50.300 174 353 5.4E-63 T 14-10-2018 VS_1873 68aa678612e3cf603e7a0aa93332f373 295 Pfam PF00665 Integrase core domain 134 247 9.4E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_1873 68aa678612e3cf603e7a0aa93332f373 295 Pfam PF13276 HTH-like domain 54 108 2.4E-20 T 14-10-2018 IPR025948 HTH-like domain VS_1873 68aa678612e3cf603e7a0aa93332f373 295 SUPERFAMILY SSF53098 131 289 5.18E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1873 68aa678612e3cf603e7a0aa93332f373 295 Gene3D G3DSA:3.30.420.10 128 279 5.9E-19 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 217 227 7.9E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 165 186 7.9E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 36 52 7.9E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 87 106 7.9E-23 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 23 350 7.8E-68 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 Gene3D G3DSA:1.10.240.10 204 318 2.9E-99 T 14-10-2018 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 Gene3D G3DSA:3.40.50.620 26 345 2.9E-99 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 SUPERFAMILY SSF52374 23 350 3.46E-75 T 14-10-2018 VS_II0839 78eead8ae5fc6106ba4642f2d3e57098 353 Pfam PF00579 tRNA synthetases class I (W and Y) 21 305 3.6E-54 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0886 08dbb880587ed5c3f35e09cc41d8a5d1 314 SUPERFAMILY SSF46785 8 90 2.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0886 08dbb880587ed5c3f35e09cc41d8a5d1 314 Gene3D G3DSA:3.40.190.10 165 267 6.2E-58 T 14-10-2018 VS_0886 08dbb880587ed5c3f35e09cc41d8a5d1 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0886 08dbb880587ed5c3f35e09cc41d8a5d1 314 Pfam PF03466 LysR substrate binding domain 91 296 2.4E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0886 08dbb880587ed5c3f35e09cc41d8a5d1 314 Gene3D G3DSA:3.40.190.10 94 293 6.2E-58 T 14-10-2018 VS_0886 08dbb880587ed5c3f35e09cc41d8a5d1 314 Gene3D G3DSA:1.10.10.10 5 91 2.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0886 08dbb880587ed5c3f35e09cc41d8a5d1 314 SUPERFAMILY SSF53850 91 299 1.07E-44 T 14-10-2018 VS_1691 59607cd79858c92e2a895b80b6ef746f 477 SUPERFAMILY SSF46785 3 76 4.35E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1691 59607cd79858c92e2a895b80b6ef746f 477 Gene3D G3DSA:3.90.1150.10 99 466 3.4E-95 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1691 59607cd79858c92e2a895b80b6ef746f 477 Pfam PF00155 Aminotransferase class I and II 137 459 5.2E-27 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_1691 59607cd79858c92e2a895b80b6ef746f 477 SUPERFAMILY SSF53383 95 467 1.88E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1691 59607cd79858c92e2a895b80b6ef746f 477 Gene3D G3DSA:3.40.640.10 142 361 3.4E-95 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1691 59607cd79858c92e2a895b80b6ef746f 477 Gene3D G3DSA:1.10.10.10 2 68 2.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1691 59607cd79858c92e2a895b80b6ef746f 477 SMART SM00345 8 67 7.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1691 59607cd79858c92e2a895b80b6ef746f 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 67 1.9E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II1359 a4de45def5695701e616fe7e01003206 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VS_II1359 a4de45def5695701e616fe7e01003206 160 SUPERFAMILY SSF46785 11 158 9.56E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1359 a4de45def5695701e616fe7e01003206 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 1.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1359 a4de45def5695701e616fe7e01003206 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 1.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1359 a4de45def5695701e616fe7e01003206 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 1.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1359 a4de45def5695701e616fe7e01003206 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 1.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1359 a4de45def5695701e616fe7e01003206 160 Gene3D G3DSA:1.10.10.10 1 160 8.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1359 a4de45def5695701e616fe7e01003206 160 Pfam PF01047 MarR family 52 110 6.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1359 a4de45def5695701e616fe7e01003206 160 SMART SM00347 42 145 1.7E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 SUPERFAMILY SSF82866 807 1033 4.71E-43 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:1.20.1640.10 522 1026 7.3E-226 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 SUPERFAMILY SSF82714 734 808 5.36E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 SUPERFAMILY SSF82714 180 262 4.32E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 SUPERFAMILY SSF82693 41 132 1.67E-19 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:3.30.2090.10 723 810 7.3E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:3.30.2090.10 175 265 7.3E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:3.30.70.1430 41 818 7.3E-226 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:3.30.70.1430 575 677 7.3E-226 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:3.30.70.1440 678 870 7.3E-226 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:1.20.1640.10 11 521 7.3E-226 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 PRINTS PR00702 Acriflavin resistance protein family signature 352 373 2.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 2.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Gene3D G3DSA:3.30.70.1320 134 322 7.3E-226 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 SUPERFAMILY SSF82693 137 318 3.79E-10 T 14-10-2018 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Pfam PF00873 AcrB/AcrD/AcrF family 688 1028 3.1E-54 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 Pfam PF00873 AcrB/AcrD/AcrF family 4 607 2.5E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1037 e984a3e7b627c1e595cea5d938ea2cf3 1059 SUPERFAMILY SSF82866 288 500 1.31E-30 T 14-10-2018 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 Gene3D G3DSA:3.20.80.10 138 287 9.1E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 Pfam PF12833 Helix-turn-helix domain 29 108 1.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 3.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 3.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 SMART SM00871 137 287 1.6E-16 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 SUPERFAMILY SSF46689 60 110 3.72E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 1.0E-28 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 SUPERFAMILY SSF46689 6 57 2.06E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 Gene3D G3DSA:1.10.10.60 57 112 6.3E-18 T 14-10-2018 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 SUPERFAMILY SSF55136 138 286 4.19E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 SMART SM00342 23 107 4.0E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 Gene3D G3DSA:1.10.10.60 1 56 6.7E-15 T 14-10-2018 VS_II1402 e8d0bf04e69f497f1a72c98cf6476e44 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_3073 fe50e40ce1402483f25457da0935e48a 436 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_3073 fe50e40ce1402483f25457da0935e48a 436 SMART SM00487 28 234 2.3E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_3073 fe50e40ce1402483f25457da0935e48a 436 Pfam PF00271 Helicase conserved C-terminal domain 245 351 4.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VS_3073 fe50e40ce1402483f25457da0935e48a 436 Gene3D G3DSA:3.40.50.300 230 408 3.0E-45 T 14-10-2018 VS_3073 fe50e40ce1402483f25457da0935e48a 436 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.3E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_3073 fe50e40ce1402483f25457da0935e48a 436 Gene3D G3DSA:3.40.50.300 2 222 7.2E-72 T 14-10-2018 VS_3073 fe50e40ce1402483f25457da0935e48a 436 SUPERFAMILY SSF52540 84 363 7.34E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3073 fe50e40ce1402483f25457da0935e48a 436 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.097 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VS_3073 fe50e40ce1402483f25457da0935e48a 436 SMART SM00490 270 351 1.2E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2651 55223f0376cca5c0328e80a301df4cb2 477 SMART SM00387 371 477 6.0E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2651 55223f0376cca5c0328e80a301df4cb2 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 471 3.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2651 55223f0376cca5c0328e80a301df4cb2 477 Gene3D G3DSA:3.30.565.10 335 476 4.0E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2651 55223f0376cca5c0328e80a301df4cb2 477 SUPERFAMILY SSF55874 329 473 1.44E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2651 55223f0376cca5c0328e80a301df4cb2 477 SUPERFAMILY SSF47384 258 324 3.34E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_2651 55223f0376cca5c0328e80a301df4cb2 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 2.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2651 55223f0376cca5c0328e80a301df4cb2 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 2.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2651 55223f0376cca5c0328e80a301df4cb2 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 2.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2651 55223f0376cca5c0328e80a301df4cb2 477 Gene3D G3DSA:1.10.287.130 225 332 3.2E-12 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VS_II0668 0ddac1577e34c056b5f977711038731d 852 Gene3D G3DSA:3.50.50.60 110 246 1.1E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0668 0ddac1577e34c056b5f977711038731d 852 Gene3D G3DSA:3.50.50.60 7 283 1.1E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0668 0ddac1577e34c056b5f977711038731d 852 SUPERFAMILY SSF51905 144 310 4.53E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0668 0ddac1577e34c056b5f977711038731d 852 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 2.1E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VS_II0668 0ddac1577e34c056b5f977711038731d 852 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II0668 0ddac1577e34c056b5f977711038731d 852 SUPERFAMILY SSF55124 502 628 9.65E-30 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II0668 0ddac1577e34c056b5f977711038731d 852 Gene3D G3DSA:1.10.10.1100 423 477 2.9E-12 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PIRSF PIRSF037149 1 836 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VS_II0668 0ddac1577e34c056b5f977711038731d 852 Gene3D G3DSA:3.30.413.10 631 780 3.4E-31 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.1E-11 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II0668 0ddac1577e34c056b5f977711038731d 852 SUPERFAMILY SSF51905 2 184 5.19E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0668 0ddac1577e34c056b5f977711038731d 852 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 771 3.4E-14 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II0668 0ddac1577e34c056b5f977711038731d 852 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 2.4E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.6E-14 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.6E-14 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.6E-14 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.6E-14 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.6E-14 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 1.4E-9 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.4E-9 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.4E-9 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.4E-9 T 14-10-2018 VS_II0668 0ddac1577e34c056b5f977711038731d 852 SUPERFAMILY SSF56014 633 808 1.22E-45 T 14-10-2018 VS_1219 593705f55f1f2c41e49fcea87db0a09b 418 SUPERFAMILY SSF51556 75 374 4.26E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_1219 593705f55f1f2c41e49fcea87db0a09b 418 TIGRFAM TIGR01224 hutI: imidazolonepropionase 29 413 2.2E-150 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1219 593705f55f1f2c41e49fcea87db0a09b 418 Gene3D G3DSA:3.20.20.140 76 374 2.1E-161 T 14-10-2018 VS_1219 593705f55f1f2c41e49fcea87db0a09b 418 SUPERFAMILY SSF51338 3 415 1.12E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_1219 593705f55f1f2c41e49fcea87db0a09b 418 Gene3D G3DSA:2.30.40.10 9 411 2.1E-161 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_1219 593705f55f1f2c41e49fcea87db0a09b 418 Pfam PF01979 Amidohydrolase family 72 391 5.4E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VS_1219 593705f55f1f2c41e49fcea87db0a09b 418 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 414 41.459 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1769 b160b9074728aed70b213a4fd48bda87 841 PRINTS PR00702 Acriflavin resistance protein family signature 291 315 2.9E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1769 b160b9074728aed70b213a4fd48bda87 841 PRINTS PR00702 Acriflavin resistance protein family signature 782 805 2.9E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1769 b160b9074728aed70b213a4fd48bda87 841 PRINTS PR00702 Acriflavin resistance protein family signature 652 675 2.9E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1769 b160b9074728aed70b213a4fd48bda87 841 PRINTS PR00702 Acriflavin resistance protein family signature 707 731 2.9E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1769 b160b9074728aed70b213a4fd48bda87 841 SUPERFAMILY SSF82866 632 810 1.31E-32 T 14-10-2018 VS_1769 b160b9074728aed70b213a4fd48bda87 841 Pfam PF03176 MMPL family 633 812 3.3E-15 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VS_1769 b160b9074728aed70b213a4fd48bda87 841 Pfam PF03176 MMPL family 103 449 2.7E-22 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VS_1769 b160b9074728aed70b213a4fd48bda87 841 SUPERFAMILY SSF82866 203 424 5.1E-33 T 14-10-2018 VS_1769 b160b9074728aed70b213a4fd48bda87 841 Gene3D G3DSA:1.20.1640.10 627 823 3.1E-17 T 14-10-2018 VS_1769 b160b9074728aed70b213a4fd48bda87 841 Gene3D G3DSA:1.20.1640.10 224 438 1.1E-12 T 14-10-2018 VS_1537 870513967c98fee87c0b262378b84ba0 156 SUPERFAMILY SSF46785 1 86 1.26E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1537 870513967c98fee87c0b262378b84ba0 156 Gene3D G3DSA:1.10.10.10 1 89 3.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1537 870513967c98fee87c0b262378b84ba0 156 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1537 870513967c98fee87c0b262378b84ba0 156 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1537 870513967c98fee87c0b262378b84ba0 156 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1537 870513967c98fee87c0b262378b84ba0 156 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_3139 d41f5640ddc0eb3f8af6f594cdff8356 328 Pfam PF01636 Phosphotransferase enzyme family 36 256 7.9E-41 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VS_3139 d41f5640ddc0eb3f8af6f594cdff8356 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.61 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VS_3139 d41f5640ddc0eb3f8af6f594cdff8356 328 Gene3D G3DSA:1.20.1270.170 149 307 4.8E-123 T 14-10-2018 VS_3139 d41f5640ddc0eb3f8af6f594cdff8356 328 Gene3D G3DSA:3.30.200.70 13 108 4.8E-123 T 14-10-2018 VS_3139 d41f5640ddc0eb3f8af6f594cdff8356 328 SUPERFAMILY SSF56112 6 328 8.46E-92 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_3139 d41f5640ddc0eb3f8af6f594cdff8356 328 Gene3D G3DSA:1.10.510.10 60 258 4.8E-123 T 14-10-2018 VS_II1112 9383c3e44e422dee0c3005070be2c821 334 Gene3D G3DSA:3.40.1550.10 139 328 4.4E-31 T 14-10-2018 IPR028976 CheC-like superfamily VS_II1112 9383c3e44e422dee0c3005070be2c821 334 Gene3D G3DSA:3.40.50.2300 2 126 2.5E-27 T 14-10-2018 VS_II1112 9383c3e44e422dee0c3005070be2c821 334 SUPERFAMILY SSF52172 4 123 9.68E-28 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1112 9383c3e44e422dee0c3005070be2c821 334 Pfam PF00072 Response regulator receiver domain 5 114 1.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1112 9383c3e44e422dee0c3005070be2c821 334 SMART SM00448 3 115 1.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1112 9383c3e44e422dee0c3005070be2c821 334 SUPERFAMILY SSF103039 140 329 4.05E-38 T 14-10-2018 IPR028976 CheC-like superfamily VS_1042 3fb92345023f257c65cfc2e24356c951 235 Pfam PF00154 recA bacterial DNA recombination protein 19 126 1.2E-6 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VS_1042 3fb92345023f257c65cfc2e24356c951 235 Gene3D G3DSA:3.40.50.300 49 157 2.8E-30 T 14-10-2018 VS_1042 3fb92345023f257c65cfc2e24356c951 235 PIRSF PIRSF037290 1 234 7.9E-60 T 14-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 VS_1042 3fb92345023f257c65cfc2e24356c951 235 SUPERFAMILY SSF52540 45 156 9.96E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0844 8e49de328dcb43cdcb5f19b0f93078a3 469 SUPERFAMILY SSF47384 260 319 2.55E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0844 8e49de328dcb43cdcb5f19b0f93078a3 469 Gene3D G3DSA:3.30.565.10 333 465 7.8E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0844 8e49de328dcb43cdcb5f19b0f93078a3 469 SMART SM00388 261 328 5.7E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0844 8e49de328dcb43cdcb5f19b0f93078a3 469 Pfam PF11884 Domain of unknown function (DUF3404) 15 263 2.1E-92 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 VS_II0844 8e49de328dcb43cdcb5f19b0f93078a3 469 Gene3D G3DSA:1.10.287.130 249 327 2.6E-5 T 14-10-2018 VS_II0844 8e49de328dcb43cdcb5f19b0f93078a3 469 SUPERFAMILY SSF55874 337 455 3.54E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Gene3D G3DSA:1.20.58.310 7 107 3.1E-34 T 14-10-2018 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Gene3D G3DSA:3.30.1840.10 108 305 3.0E-67 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Hamap MF_00347 Polyphosphate kinase [ppk]. 2 681 26.532 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 PIRSF PIRSF015589 1 696 1.4E-235 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Gene3D G3DSA:3.30.870.10 317 497 8.5E-69 T 14-10-2018 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 SUPERFAMILY SSF140356 4 103 1.18E-29 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 SUPERFAMILY SSF143724 105 310 9.42E-57 T 14-10-2018 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 SUPERFAMILY SSF56024 498 681 3.14E-64 T 14-10-2018 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Gene3D G3DSA:3.30.870.10 498 686 5.7E-68 T 14-10-2018 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 SUPERFAMILY SSF56024 313 493 9.1E-52 T 14-10-2018 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Pfam PF13089 Polyphosphate kinase N-terminal domain 5 107 3.4E-30 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Pfam PF02503 Polyphosphate kinase middle domain 116 316 2.9E-42 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 5 662 4.8E-246 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VS_0583 6a79ea9d90ec6f9357bacf1f179bdf2e 698 Pfam PF13090 Polyphosphate kinase C-terminal domain 329 655 4.9E-141 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VS_II0257 31919f093ef855160795d5e647dd0a16 503 Gene3D G3DSA:2.60.40.1610 104 240 6.6E-53 T 14-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily VS_II0257 31919f093ef855160795d5e647dd0a16 503 Pfam PF06863 Protein of unknown function (DUF1254) 121 218 9.9E-10 T 14-10-2018 IPR010679 Domain of unknown function DUF1254 VS_II0257 31919f093ef855160795d5e647dd0a16 503 SUPERFAMILY SSF160935 55 489 2.22E-99 T 14-10-2018 VS_II0257 31919f093ef855160795d5e647dd0a16 503 Gene3D G3DSA:1.10.3360.10 76 304 6.6E-53 T 14-10-2018 IPR023289 VPA0735-like domain superfamily VS_II0257 31919f093ef855160795d5e647dd0a16 503 Pfam PF06742 Protein of unknown function (DUF1214) 376 484 6.0E-27 T 14-10-2018 IPR010621 Domain of unknown function DUF1214 VS_II0257 31919f093ef855160795d5e647dd0a16 503 Gene3D G3DSA:2.60.120.600 324 502 4.1E-41 T 14-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily VS_II0346 87ce8a0de5aa63314c008d5305555150 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 6.8E-22 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.0E-44 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 SUPERFAMILY SSF51735 128 304 2.16E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0346 87ce8a0de5aa63314c008d5305555150 478 Gene3D G3DSA:3.40.50.720 129 462 2.0E-114 T 14-10-2018 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 SUPERFAMILY SSF55347 288 451 1.37E-52 T 14-10-2018 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 SMART SM00846 127 288 6.0E-56 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 2.5E-112 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 Gene3D G3DSA:3.30.360.10 287 452 2.0E-114 T 14-10-2018 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 5.7E-18 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 5.7E-18 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 5.7E-18 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 5.7E-18 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II0346 87ce8a0de5aa63314c008d5305555150 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_3156 beb3e2d5de2b823702a12175a3ab7814 156 Gene3D G3DSA:1.20.5.620 62 122 1.4E-22 T 14-10-2018 VS_3156 beb3e2d5de2b823702a12175a3ab7814 156 SUPERFAMILY SSF81573 63 121 1.57E-14 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VS_3156 beb3e2d5de2b823702a12175a3ab7814 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.138 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VS_3156 beb3e2d5de2b823702a12175a3ab7814 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.0E-56 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VS_3156 beb3e2d5de2b823702a12175a3ab7814 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.9E-35 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VS_1552 421b960574567547dc85e624c407feed 269 Pfam PF08241 Methyltransferase domain 46 144 1.0E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VS_1552 421b960574567547dc85e624c407feed 269 SUPERFAMILY SSF53335 19 219 1.07E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1552 421b960574567547dc85e624c407feed 269 Gene3D G3DSA:3.40.50.150 11 268 7.8E-37 T 14-10-2018 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 169.239 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 SUPERFAMILY SSF53067 5 196 6.02E-62 T 14-10-2018 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 Pfam PF00871 Acetokinase family 6 391 7.1E-142 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 PRINTS PR00471 Acetate kinase family signature 299 312 3.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 PRINTS PR00471 Acetate kinase family signature 173 186 3.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 PRINTS PR00471 Acetate kinase family signature 378 390 3.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 PRINTS PR00471 Acetate kinase family signature 6 17 3.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 PRINTS PR00471 Acetate kinase family signature 321 337 3.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 PRINTS PR00471 Acetate kinase family signature 203 224 3.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 PIRSF PIRSF000722 2 397 1.3E-134 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 4.5E-146 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 Gene3D G3DSA:3.30.420.40 3 195 3.2E-65 T 14-10-2018 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 Gene3D G3DSA:3.30.420.40 196 397 7.9E-73 T 14-10-2018 VS_II1135 64f6f03b215b44de7413df4b296fc065 397 SUPERFAMILY SSF53067 158 396 4.06E-78 T 14-10-2018 VS_3124 ddc5c9cc0e8ef452396f29108edcd8e5 370 SUPERFAMILY SSF102405 83 285 4.32E-40 T 14-10-2018 VS_3124 ddc5c9cc0e8ef452396f29108edcd8e5 370 Gene3D G3DSA:1.10.10.10 294 365 2.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_3124 ddc5c9cc0e8ef452396f29108edcd8e5 370 Pfam PF02481 DNA recombination-mediator protein A 73 278 6.1E-78 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VS_3124 ddc5c9cc0e8ef452396f29108edcd8e5 370 Gene3D G3DSA:3.40.50.450 1 291 2.4E-96 T 14-10-2018 VS_3124 ddc5c9cc0e8ef452396f29108edcd8e5 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 73 284 7.1E-78 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 Gene3D G3DSA:3.60.15.10 1 247 2.7E-100 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 Gene3D G3DSA:2.20.28.10 443 501 2.3E-19 T 14-10-2018 VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 Pfam PF00301 Rubredoxin 453 498 7.6E-18 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 SUPERFAMILY SSF57802 450 500 5.39E-17 T 14-10-2018 VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 PRINTS PR00163 Rubredoxin signature 482 498 1.4E-5 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 PRINTS PR00163 Rubredoxin signature 452 468 1.4E-5 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 SUPERFAMILY SSF56281 8 278 7.45E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 Pfam PF00753 Metallo-beta-lactamase superfamily 34 186 4.6E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 Pfam PF00258 Flavodoxin 256 386 9.7E-11 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 SUPERFAMILY SSF52218 252 396 4.84E-33 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 Gene3D G3DSA:3.40.50.360 253 395 2.8E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_II1439 365b7cc9c7d01f112c2a070e2e7ec594 501 SMART SM00849 34 227 2.4E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_0160 9355ef1a84909d70ef7a20ea2b03c8d6 90 Gene3D G3DSA:3.90.940.10 1 90 9.0E-30 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VS_0160 9355ef1a84909d70ef7a20ea2b03c8d6 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_0160 9355ef1a84909d70ef7a20ea2b03c8d6 90 SUPERFAMILY SSF63562 1 78 8.89E-26 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VS_0160 9355ef1a84909d70ef7a20ea2b03c8d6 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.7E-18 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VS_0160 9355ef1a84909d70ef7a20ea2b03c8d6 90 SMART SM01409 8 61 1.3E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VS_0160 9355ef1a84909d70ef7a20ea2b03c8d6 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2779 87370b692a3da3daa0c518a35161bac8 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 181 3.1E-84 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VS_2779 87370b692a3da3daa0c518a35161bac8 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 9.8E-74 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VS_1410 41a33b1135896d5210bb6f46b33f6452 279 Pfam PF13509 S1 domain 70 131 1.1E-4 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VS_1410 41a33b1135896d5210bb6f46b33f6452 279 Pfam PF13509 S1 domain 4 63 1.6E-22 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VS_1410 41a33b1135896d5210bb6f46b33f6452 279 PIRSF PIRSF012524 1 279 1.1E-95 T 14-10-2018 IPR014464 Conserved virulence factor B VS_1410 41a33b1135896d5210bb6f46b33f6452 279 SMART SM00316 145 208 0.22 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_1410 41a33b1135896d5210bb6f46b33f6452 279 SMART SM00316 69 132 2.9 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_1410 41a33b1135896d5210bb6f46b33f6452 279 SMART SM00316 3 64 15.0 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_1410 41a33b1135896d5210bb6f46b33f6452 279 Gene3D G3DSA:1.10.10.10 216 278 5.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2789 9a4dacee7b3ca130555a3aad895736a5 302 Gene3D G3DSA:3.40.50.620 7 211 1.7E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2789 9a4dacee7b3ca130555a3aad895736a5 302 PIRSF PIRSF002936 1 302 1.4E-155 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VS_2789 9a4dacee7b3ca130555a3aad895736a5 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 3.6E-162 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VS_2789 9a4dacee7b3ca130555a3aad895736a5 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.5E-63 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VS_2789 9a4dacee7b3ca130555a3aad895736a5 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.85 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VS_2789 9a4dacee7b3ca130555a3aad895736a5 302 SUPERFAMILY SSF52402 6 209 6.9E-74 T 14-10-2018 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 666 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 SUPERFAMILY SSF52922 536 667 4.71E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 336 4.7E-167 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 SUPERFAMILY SSF52518 336 529 1.64E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 Pfam PF02779 Transketolase, pyrimidine binding domain 357 527 1.0E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 Gene3D G3DSA:3.40.50.920 541 667 4.8E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 Gene3D G3DSA:3.40.50.970 5 328 4.1E-132 T 14-10-2018 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 Gene3D G3DSA:3.40.50.970 329 540 1.1E-85 T 14-10-2018 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 SMART SM00861 357 528 1.4E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 SUPERFAMILY SSF52518 8 332 2.05E-120 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_II0463 8c81bcd5833e5d7d0b98fa3606851303 667 Pfam PF02780 Transketolase, C-terminal domain 544 658 1.2E-19 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VS_2654 ee9334e4af204f0b999c784916b85b00 670 Gene3D G3DSA:3.40.50.970 8 331 4.1E-130 T 14-10-2018 VS_2654 ee9334e4af204f0b999c784916b85b00 670 TIGRFAM TIGR00232 tktlase_bact: transketolase 11 669 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VS_2654 ee9334e4af204f0b999c784916b85b00 670 SUPERFAMILY SSF52518 339 532 1.26E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2654 ee9334e4af204f0b999c784916b85b00 670 Pfam PF02779 Transketolase, pyrimidine binding domain 360 530 8.6E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_2654 ee9334e4af204f0b999c784916b85b00 670 SUPERFAMILY SSF52518 11 335 3.07E-118 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2654 ee9334e4af204f0b999c784916b85b00 670 SUPERFAMILY SSF52922 539 670 1.44E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_2654 ee9334e4af204f0b999c784916b85b00 670 ProSitePatterns PS00801 Transketolase signature 1. 18 38 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2654 ee9334e4af204f0b999c784916b85b00 670 SMART SM00861 360 531 1.3E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VS_2654 ee9334e4af204f0b999c784916b85b00 670 Pfam PF02780 Transketolase, C-terminal domain 546 661 1.1E-19 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VS_2654 ee9334e4af204f0b999c784916b85b00 670 Gene3D G3DSA:3.40.50.920 544 670 4.9E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_2654 ee9334e4af204f0b999c784916b85b00 670 ProSitePatterns PS00802 Transketolase signature 2. 473 489 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2654 ee9334e4af204f0b999c784916b85b00 670 Gene3D G3DSA:3.40.50.970 332 543 4.9E-85 T 14-10-2018 VS_2654 ee9334e4af204f0b999c784916b85b00 670 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 339 6.0E-165 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_0841 a32e847bbab607c39626a0437bfa7f5b 122 SMART SM00448 1 115 7.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0841 a32e847bbab607c39626a0437bfa7f5b 122 Gene3D G3DSA:3.40.50.2300 1 122 4.1E-39 T 14-10-2018 VS_0841 a32e847bbab607c39626a0437bfa7f5b 122 SUPERFAMILY SSF52172 1 120 3.98E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_0841 a32e847bbab607c39626a0437bfa7f5b 122 Pfam PF00072 Response regulator receiver domain 3 115 1.5E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2029 1269404e0f5743e703d713c18ec43228 136 SMART SM00528 89 136 4.6E-23 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VS_2029 1269404e0f5743e703d713c18ec43228 136 Pfam PF00816 H-NS histone family 33 130 1.3E-19 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VS_2029 1269404e0f5743e703d713c18ec43228 136 SUPERFAMILY SSF81273 2 58 2.16E-16 T 14-10-2018 VS_2029 1269404e0f5743e703d713c18ec43228 136 Gene3D G3DSA:1.10.287.1050 1 84 3.8E-29 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VS_2029 1269404e0f5743e703d713c18ec43228 136 PIRSF PIRSF002096 1 136 1.2E-54 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VS_2029 1269404e0f5743e703d713c18ec43228 136 Gene3D G3DSA:4.10.430.10 93 136 1.7E-23 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VS_2029 1269404e0f5743e703d713c18ec43228 136 SUPERFAMILY SSF81273 94 135 1.88E-11 T 14-10-2018 VS_1674 ea9f1a444bc9b52bfc453d8fff628d53 368 SUPERFAMILY SSF55031 178 289 9.16E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VS_1674 ea9f1a444bc9b52bfc453d8fff628d53 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 367 4.9E-156 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like VS_1674 ea9f1a444bc9b52bfc453d8fff628d53 368 Gene3D G3DSA:3.30.70.360 176 287 2.7E-113 T 14-10-2018 VS_1674 ea9f1a444bc9b52bfc453d8fff628d53 368 SUPERFAMILY SSF53187 7 367 7.86E-57 T 14-10-2018 VS_1674 ea9f1a444bc9b52bfc453d8fff628d53 368 Gene3D G3DSA:3.40.630.10 16 362 2.7E-113 T 14-10-2018 VS_1674 ea9f1a444bc9b52bfc453d8fff628d53 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 1.6E-17 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VS_1674 ea9f1a444bc9b52bfc453d8fff628d53 368 Pfam PF07687 Peptidase dimerisation domain 183 270 2.9E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 Gene3D G3DSA:3.20.20.70 1 277 7.9E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 Gene3D G3DSA:1.10.238.260 280 393 4.9E-32 T 14-10-2018 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 SUPERFAMILY SSF51569 1 291 8.79E-101 T 14-10-2018 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 4.0E-236 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.141 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 Gene3D G3DSA:3.30.160.270 394 500 1.0E-7 T 14-10-2018 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 SMART SM00917 369 499 6.2E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 Pfam PF00682 HMGL-like 4 273 2.5E-102 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 5.7E-31 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 SUPERFAMILY SSF110921 393 498 3.53E-21 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VS_0380 e801ad54d14c0ae9719d845aa7ffe661 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VS_0079 583e69a995a2c849cd1de3034da07a93 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 7.9E-177 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VS_0079 583e69a995a2c849cd1de3034da07a93 413 PIRSF PIRSF016055 1 413 1.6E-185 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VS_0079 583e69a995a2c849cd1de3034da07a93 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.044 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VS_0079 583e69a995a2c849cd1de3034da07a93 413 Pfam PF03116 NQR2, RnfD, RnfE family 45 404 4.4E-104 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VS_II0820 519d2219075d131493eeede4a960e46c 963 SUPERFAMILY SSF53383 22 447 7.39E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0820 519d2219075d131493eeede4a960e46c 963 Gene3D G3DSA:3.90.1150.10 770 905 6.8E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0820 519d2219075d131493eeede4a960e46c 963 Gene3D G3DSA:3.40.640.10 100 362 4.4E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0820 519d2219075d131493eeede4a960e46c 963 Gene3D G3DSA:3.40.640.10 531 756 2.6E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0820 519d2219075d131493eeede4a960e46c 963 SUPERFAMILY SSF53383 459 956 5.31E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0820 519d2219075d131493eeede4a960e46c 963 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 13 961 25.351 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VS_II0820 519d2219075d131493eeede4a960e46c 963 Pfam PF02347 Glycine cleavage system P-protein 466 743 4.2E-9 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VS_II0820 519d2219075d131493eeede4a960e46c 963 Pfam PF02347 Glycine cleavage system P-protein 22 447 6.0E-179 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VS_II0820 519d2219075d131493eeede4a960e46c 963 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 22 955 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 Gene3D G3DSA:3.30.70.1450 411 484 2.9E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 Pfam PF00999 Sodium/hydrogen exchanger family 15 384 5.7E-55 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 SMART SM01091 493 573 7.8E-9 T 14-10-2018 IPR005170 Transporter-associated domain VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 Pfam PF02080 TrkA-C domain 418 484 1.4E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 48.379 T 14-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 SUPERFAMILY SSF116726 411 485 6.67E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 SUPERFAMILY SSF56176 499 570 3.87E-7 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 Gene3D G3DSA:1.20.1530.20 7 392 8.8E-21 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VS_2932 bb4061714c8dc820ed6ac3cf9dc1ac6c 583 Pfam PF03471 Transporter associated domain 496 569 6.2E-5 T 14-10-2018 IPR005170 Transporter-associated domain VS_2161 0d3e21d5943faab32c1b3be8d232040d 243 Pfam PF13489 Methyltransferase domain 25 209 2.7E-6 T 14-10-2018 VS_2161 0d3e21d5943faab32c1b3be8d232040d 243 Gene3D G3DSA:3.40.50.150 8 215 3.1E-16 T 14-10-2018 VS_2161 0d3e21d5943faab32c1b3be8d232040d 243 SUPERFAMILY SSF53335 17 220 6.39E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0042 c271a10017a18ac5927e3e2ad532cc21 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.6E-26 T 14-10-2018 IPR001498 Impact, N-terminal VS_0042 c271a10017a18ac5927e3e2ad532cc21 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 4.8E-10 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VS_0042 c271a10017a18ac5927e3e2ad532cc21 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 201 3.2E-62 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal VS_0042 c271a10017a18ac5927e3e2ad532cc21 207 SUPERFAMILY SSF54211 5 134 2.73E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0042 c271a10017a18ac5927e3e2ad532cc21 207 Gene3D G3DSA:3.30.230.30 2 136 2.5E-48 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily VS_0042 c271a10017a18ac5927e3e2ad532cc21 207 SUPERFAMILY SSF54980 139 203 3.6E-7 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_1835 cdf64b502551eb94062c2a1e0993862b 430 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 1.3E-87 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VS_1835 cdf64b502551eb94062c2a1e0993862b 430 Gene3D G3DSA:3.40.50.1970 1 180 7.4E-48 T 14-10-2018 VS_1835 cdf64b502551eb94062c2a1e0993862b 430 SUPERFAMILY SSF56796 1 381 4.19E-87 T 14-10-2018 VS_1835 cdf64b502551eb94062c2a1e0993862b 430 Gene3D G3DSA:1.20.1090.10 186 383 1.5E-39 T 14-10-2018 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 371 6.2E-127 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 Gene3D G3DSA:3.40.630.10 23 360 1.9E-79 T 14-10-2018 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 Pfam PF07687 Peptidase dimerisation domain 174 285 2.2E-25 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VS_2889 04978ba916fe578f77397a4261ebe9ed 378 SUPERFAMILY SSF55031 177 291 9.42E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VS_2889 04978ba916fe578f77397a4261ebe9ed 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 64.295 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 2.3E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 Gene3D G3DSA:3.30.70.360 177 292 1.9E-79 T 14-10-2018 VS_2889 04978ba916fe578f77397a4261ebe9ed 378 SUPERFAMILY SSF53187 3 377 1.86E-56 T 14-10-2018 VS_0789 62010b648f83bef585dac2b0156245fd 357 Gene3D G3DSA:1.20.58.1390 101 315 7.2E-112 T 14-10-2018 VS_0789 62010b648f83bef585dac2b0156245fd 357 SUPERFAMILY SSF53335 99 342 9.15E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0789 62010b648f83bef585dac2b0156245fd 357 Pfam PF00891 O-methyltransferase 172 337 9.7E-13 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 VS_0789 62010b648f83bef585dac2b0156245fd 357 PIRSF PIRSF005739 7 344 4.0E-8 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 VS_0789 62010b648f83bef585dac2b0156245fd 357 Gene3D G3DSA:3.40.50.150 166 350 7.2E-112 T 14-10-2018 VS_0789 62010b648f83bef585dac2b0156245fd 357 SUPERFAMILY SSF46785 19 99 2.4E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0789 62010b648f83bef585dac2b0156245fd 357 Gene3D G3DSA:1.10.10.10 1 98 7.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1979 bfa03b2e229841f31f394653240fa68b 560 SMART SM00283 297 558 4.3E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1979 bfa03b2e229841f31f394653240fa68b 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 525 3.1E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1979 bfa03b2e229841f31f394653240fa68b 560 Gene3D G3DSA:1.10.287.950 228 560 2.2E-72 T 14-10-2018 VS_1979 bfa03b2e229841f31f394653240fa68b 560 SMART SM00304 229 282 4.9E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1979 bfa03b2e229841f31f394653240fa68b 560 SUPERFAMILY SSF58104 257 559 5.89E-72 T 14-10-2018 VS_1979 bfa03b2e229841f31f394653240fa68b 560 Pfam PF00672 HAMP domain 230 279 2.6E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0209 9a512f70f7fac2331ce8ebc9d49c09a7 714 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 699 3.1E-34 T 14-10-2018 IPR000160 GGDEF domain VS_II0209 9a512f70f7fac2331ce8ebc9d49c09a7 714 Gene3D G3DSA:3.30.70.270 517 703 1.5E-42 T 14-10-2018 VS_II0209 9a512f70f7fac2331ce8ebc9d49c09a7 714 SMART SM00267 521 703 4.7E-43 T 14-10-2018 IPR000160 GGDEF domain VS_II0209 9a512f70f7fac2331ce8ebc9d49c09a7 714 Gene3D G3DSA:3.30.450.40 177 335 3.2E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_II0209 9a512f70f7fac2331ce8ebc9d49c09a7 714 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 529 702 9.8E-37 T 14-10-2018 IPR000160 GGDEF domain VS_II0209 9a512f70f7fac2331ce8ebc9d49c09a7 714 SUPERFAMILY SSF55073 537 701 2.43E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0209 9a512f70f7fac2331ce8ebc9d49c09a7 714 SUPERFAMILY SSF55781 179 331 5.23E-6 T 14-10-2018 VS_II0225 75a992002d64f96aac865c0dd3b0d786 297 SUPERFAMILY SSF103481 35 138 3.27E-12 T 14-10-2018 VS_II0225 75a992002d64f96aac865c0dd3b0d786 297 Pfam PF00892 EamA-like transporter family 4 135 4.2E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0225 75a992002d64f96aac865c0dd3b0d786 297 Pfam PF00892 EamA-like transporter family 151 280 1.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0225 75a992002d64f96aac865c0dd3b0d786 297 SUPERFAMILY SSF103481 188 285 1.44E-14 T 14-10-2018 VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 SMART SM00267 328 507 2.0E-39 T 14-10-2018 IPR000160 GGDEF domain VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 504 4.0E-34 T 14-10-2018 IPR000160 GGDEF domain VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 SUPERFAMILY SSF55073 344 507 1.49E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 Pfam PF00563 EAL domain 525 755 4.9E-61 T 14-10-2018 IPR001633 EAL domain VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 SMART SM00052 517 760 2.0E-69 T 14-10-2018 IPR001633 EAL domain VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 Gene3D G3DSA:1.20.1480.50 249 335 1.3E-5 T 14-10-2018 VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 SUPERFAMILY SSF141868 523 769 2.35E-69 T 14-10-2018 IPR035919 EAL domain superfamily VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 Gene3D G3DSA:3.20.20.450 519 772 8.7E-74 T 14-10-2018 IPR035919 EAL domain superfamily VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 503 2.7E-38 T 14-10-2018 IPR000160 GGDEF domain VS_0555 b29bbecb0044b7f60631c17f78c2c0cf 792 Gene3D G3DSA:3.30.70.270 336 518 4.0E-47 T 14-10-2018 VS_0465 0d759460c912c162cca6d86b607d821d 205 Pfam PF03458 UPF0126 domain 8 81 1.3E-21 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VS_0465 0d759460c912c162cca6d86b607d821d 205 Pfam PF03458 UPF0126 domain 95 165 3.0E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VS_0640 32cb4064782cbd5176de51154698920e 626 SUPERFAMILY SSF50630 361 486 1.52E-12 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_0640 32cb4064782cbd5176de51154698920e 626 SUPERFAMILY SSF50630 494 622 8.44E-35 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_0640 32cb4064782cbd5176de51154698920e 626 SUPERFAMILY SSF50630 221 343 1.41E-15 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_0640 32cb4064782cbd5176de51154698920e 626 Gene3D G3DSA:2.40.70.10 493 615 1.1E-33 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_0640 32cb4064782cbd5176de51154698920e 626 Gene3D G3DSA:2.40.70.10 118 207 6.5E-13 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_0640 32cb4064782cbd5176de51154698920e 626 Gene3D G3DSA:2.40.70.10 38 92 2.3E-5 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_0640 32cb4064782cbd5176de51154698920e 626 Pfam PF05618 Putative ATP-dependant zinc protease 136 216 2.0E-9 T 14-10-2018 VS_0640 32cb4064782cbd5176de51154698920e 626 Pfam PF05618 Putative ATP-dependant zinc protease 494 619 3.0E-26 T 14-10-2018 VS_0640 32cb4064782cbd5176de51154698920e 626 SUPERFAMILY SSF50630 41 214 1.88E-24 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_2851 bd77c8011ed2aac9f2432e0087a4e6ff 156 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 4.0E-28 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VS_2851 bd77c8011ed2aac9f2432e0087a4e6ff 156 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 9.4E-37 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VS_II1032 629015f2228e5d59e4cac535821ffe94 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 1.4E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_II1032 629015f2228e5d59e4cac535821ffe94 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 1.4E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_II1032 629015f2228e5d59e4cac535821ffe94 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 1.4E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_II1032 629015f2228e5d59e4cac535821ffe94 377 Pfam PF00381 PTS HPr component phosphorylation site 292 370 4.5E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_II1032 629015f2228e5d59e4cac535821ffe94 377 SUPERFAMILY SSF55804 4 141 2.09E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1032 629015f2228e5d59e4cac535821ffe94 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 292 370 5.1E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_II1032 629015f2228e5d59e4cac535821ffe94 377 Gene3D G3DSA:3.40.930.10 1 142 1.1E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1032 629015f2228e5d59e4cac535821ffe94 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VS_II1032 629015f2228e5d59e4cac535821ffe94 377 Gene3D G3DSA:3.30.1340.10 290 375 1.5E-27 T 14-10-2018 IPR035895 HPr-like superfamily VS_II1032 629015f2228e5d59e4cac535821ffe94 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II1032 629015f2228e5d59e4cac535821ffe94 377 SUPERFAMILY SSF55594 292 376 1.31E-23 T 14-10-2018 IPR035895 HPr-like superfamily VS_II1032 629015f2228e5d59e4cac535821ffe94 377 SUPERFAMILY SSF55804 145 276 9.16E-18 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1032 629015f2228e5d59e4cac535821ffe94 377 Gene3D G3DSA:3.40.930.10 143 275 8.7E-6 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1032 629015f2228e5d59e4cac535821ffe94 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VS_II1032 629015f2228e5d59e4cac535821ffe94 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 4.0E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 630 0.72 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 697 9.0E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 14-10-2018 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 SUPERFAMILY SSF101904 499 743 4.05E-51 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Gene3D G3DSA:1.10.268.10 371 456 2.7E-179 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Gene3D G3DSA:3.30.1360.40 240 333 2.7E-179 T 14-10-2018 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Gene3D G3DSA:2.120.10.90 502 736 1.5E-13 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VS_0424 d499bbf20aec9a540ce8756adec280fc 752 SMART SM00434 13 463 2.8E-227 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.76 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.1E-135 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 Gene3D G3DSA:3.90.199.10 34 483 2.7E-179 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VS_0424 d499bbf20aec9a540ce8756adec280fc 752 SUPERFAMILY SSF56719 33 485 1.96E-155 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 2.1E-62 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 Gene3D G3DSA:3.90.226.10 2 318 1.9E-119 T 14-10-2018 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 SUPERFAMILY SSF52096 5 318 7.66E-104 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.5E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.5E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.5E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.5E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.5E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.5E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.427 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_2336 b4d986398b9bc6a9aec9b2f0f5ec620b 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.0E-162 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_II0147 4a98474dae151d38d3c545e6a7ef6dae 389 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 383 1.7E-138 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VS_II0147 4a98474dae151d38d3c545e6a7ef6dae 389 PIRSF PIRSF006078 1 385 3.7E-127 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VS_II0147 4a98474dae151d38d3c545e6a7ef6dae 389 Gene3D G3DSA:3.40.50.10350 1 370 1.2E-131 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VS_II0147 4a98474dae151d38d3c545e6a7ef6dae 389 Pfam PF02595 Glycerate kinase family 3 381 7.9E-137 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VS_II0147 4a98474dae151d38d3c545e6a7ef6dae 389 SUPERFAMILY SSF110738 1 383 1.57E-124 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VS_II0147 4a98474dae151d38d3c545e6a7ef6dae 389 Gene3D G3DSA:3.90.1510.10 42 285 1.2E-131 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 Gene3D G3DSA:3.40.50.300 2 273 2.4E-54 T 14-10-2018 VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 SMART SM00382 336 505 3.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 SMART SM00382 18 230 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 SUPERFAMILY SSF52540 3 230 1.33E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 SUPERFAMILY SSF52540 301 518 1.35E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 Pfam PF00005 ABC transporter 10 176 2.0E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 Pfam PF00005 ABC transporter 331 459 6.5E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 Gene3D G3DSA:3.40.50.300 274 525 1.5E-50 T 14-10-2018 VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 Pfam PF12848 ABC transporter 216 299 1.3E-20 T 14-10-2018 IPR032781 ABC-transporter extension domain VS_II0718 d7755cf91c153dc6cfa381389728d56c 527 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 SUPERFAMILY SSF52172 2 187 4.41E-43 T 14-10-2018 IPR011006 CheY-like superfamily VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 6.0E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 SUPERFAMILY SSF52540 141 385 4.28E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 SMART SM00382 162 309 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 Gene3D G3DSA:1.10.10.60 381 467 4.4E-25 T 14-10-2018 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 Gene3D G3DSA:3.40.50.300 126 312 1.0E-66 T 14-10-2018 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 SMART SM00448 4 115 1.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 Gene3D G3DSA:1.10.8.60 313 380 6.7E-18 T 14-10-2018 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 Gene3D G3DSA:3.40.50.2300 1 124 2.9E-40 T 14-10-2018 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 SUPERFAMILY SSF46689 382 466 1.47E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 8.4E-240 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 4.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 4.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 Pfam PF00158 Sigma-54 interaction domain 142 309 1.4E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 Pfam PF00072 Response regulator receiver domain 6 115 1.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0118 0f13edeaba295aaa59a58e4fa3be01f9 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_1901 d25b0aa5de339e0be3a7cfee8182ce33 107 Gene3D G3DSA:2.60.300.12 5 107 3.0E-26 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_1901 d25b0aa5de339e0be3a7cfee8182ce33 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 103 3.5E-17 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VS_1901 d25b0aa5de339e0be3a7cfee8182ce33 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 106 1.4E-26 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VS_1901 d25b0aa5de339e0be3a7cfee8182ce33 107 SUPERFAMILY SSF89360 6 96 4.9E-22 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_1901 d25b0aa5de339e0be3a7cfee8182ce33 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VS_0384 83ebbbf166b03e09504880dafe262192 174 Pfam PF01569 PAP2 superfamily 65 172 7.7E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VS_0384 83ebbbf166b03e09504880dafe262192 174 SMART SM00014 61 170 8.6E-9 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VS_0384 83ebbbf166b03e09504880dafe262192 174 SUPERFAMILY SSF48317 7 172 3.01E-34 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VS_0384 83ebbbf166b03e09504880dafe262192 174 Gene3D G3DSA:1.20.144.10 89 174 6.8E-20 T 14-10-2018 VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 Gene3D G3DSA:3.40.50.300 213 408 4.1E-46 T 14-10-2018 VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 SMART SM00487 20 221 3.5E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 SUPERFAMILY SSF52540 73 356 3.16E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 Gene3D G3DSA:3.40.50.300 1 209 2.4E-74 T 14-10-2018 VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 516 49.931 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 Pfam PF00270 DEAD/DEAH box helicase 26 193 7.9E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 SMART SM00490 257 338 6.4E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0321 1a4cd102ae6fc8a2b21eca87d9367542 523 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.8E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0226 4ad70fe1cbcf31c24534d5cba56d47f7 371 Pfam PF00534 Glycosyl transferases group 1 184 338 1.1E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VS_0226 4ad70fe1cbcf31c24534d5cba56d47f7 371 Gene3D G3DSA:3.40.50.2000 176 348 2.0E-20 T 14-10-2018 VS_0226 4ad70fe1cbcf31c24534d5cba56d47f7 371 SUPERFAMILY SSF53756 33 362 3.3E-30 T 14-10-2018 VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 Gene3D G3DSA:1.10.287.110 1 79 2.2E-22 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 SUPERFAMILY SSF47144 78 169 8.24E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 Gene3D G3DSA:1.20.1280.20 80 171 8.1E-28 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.32 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.4E-19 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 SMART SM00271 1 66 8.9E-10 T 14-10-2018 IPR001623 DnaJ domain VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 9.9E-41 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 SUPERFAMILY SSF46565 1 74 3.66E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_0610 e6e2676bfc76334cbd3e8b7877505cc6 171 Pfam PF00226 DnaJ domain 3 70 2.3E-7 T 14-10-2018 IPR001623 DnaJ domain VS_1570 f1719c9dc676c646c41884271ce7efdf 407 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 8 407 23.829 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VS_1570 f1719c9dc676c646c41884271ce7efdf 407 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 15 406 1.4E-133 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VS_1570 f1719c9dc676c646c41884271ce7efdf 407 Pfam PF03616 Sodium/glutamate symporter 10 375 1.5E-119 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VS_0858 7f615c98cb63cdb196b87313c9b40131 406 SUPERFAMILY SSF48452 161 266 5.52E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0858 7f615c98cb63cdb196b87313c9b40131 406 Gene3D G3DSA:1.25.40.10 153 292 3.1E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0858 7f615c98cb63cdb196b87313c9b40131 406 Pfam PF14559 Tetratricopeptide repeat 176 244 3.1E-6 T 14-10-2018 VS_0858 7f615c98cb63cdb196b87313c9b40131 406 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 115 4.3E-29 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00369 Flavodoxin signature 141 152 1.4E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00369 Flavodoxin signature 93 106 1.4E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00369 Flavodoxin signature 173 183 1.4E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00369 Flavodoxin signature 197 216 1.4E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Pfam PF00258 Flavodoxin 94 223 1.6E-29 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 32 628 5.5E-255 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 SUPERFAMILY SSF63380 258 474 5.39E-61 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Gene3D G3DSA:1.20.990.10 309 413 5.6E-70 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 SUPERFAMILY SSF52218 91 238 5.91E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 24 628 48.907 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Gene3D G3DSA:2.40.30.10 261 468 5.6E-70 T 14-10-2018 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 SUPERFAMILY SSF52343 473 628 2.23E-52 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Pfam PF00175 Oxidoreductase NAD-binding domain 486 592 3.8E-20 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PIRSF PIRSF000207 24 628 1.7E-270 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 299 309 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 485 504 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 554 570 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 510 519 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 448 457 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 523 534 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 415 422 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 577 585 8.5E-30 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Pfam PF00667 FAD binding domain 261 445 2.7E-26 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Gene3D G3DSA:3.40.50.360 82 246 3.2E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0299 9d26ad000a0c9beb5574d75ed92b51d2 628 Gene3D G3DSA:3.40.50.80 474 628 7.8E-61 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_1910 279041b3923fbc5368a5957daa960cda 212 SUPERFAMILY SSF46894 139 211 3.3E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_1910 279041b3923fbc5368a5957daa960cda 212 SUPERFAMILY SSF52172 5 135 5.55E-34 T 14-10-2018 IPR011006 CheY-like superfamily VS_1910 279041b3923fbc5368a5957daa960cda 212 Gene3D G3DSA:3.40.50.12740 5 211 4.0E-66 T 14-10-2018 VS_1910 279041b3923fbc5368a5957daa960cda 212 SMART SM00448 5 118 1.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1910 279041b3923fbc5368a5957daa960cda 212 SMART SM00421 148 205 6.2E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1910 279041b3923fbc5368a5957daa960cda 212 Pfam PF00072 Response regulator receiver domain 7 119 1.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1910 279041b3923fbc5368a5957daa960cda 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1910 279041b3923fbc5368a5957daa960cda 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1910 279041b3923fbc5368a5957daa960cda 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1910 279041b3923fbc5368a5957daa960cda 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_1910 279041b3923fbc5368a5957daa960cda 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 Gene3D G3DSA:1.10.150.130 26 120 6.4E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 SUPERFAMILY SSF47823 26 122 3.92E-34 T 14-10-2018 VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 SUPERFAMILY SSF56349 128 318 9.12E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 Gene3D G3DSA:1.10.443.10 132 314 3.4E-73 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 30 112 2.7E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 31 320 5.1E-116 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 26 320 61.112 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 28 320 56.108 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VS_0512 4fb74ce1458f5ecf334441a3ba6de90c 320 Pfam PF00589 Phage integrase family 135 306 6.1E-53 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 SUPERFAMILY SSF46689 342 460 9.41E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 SUPERFAMILY SSF52540 139 370 7.35E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 Gene3D G3DSA:1.10.10.60 402 466 2.5E-9 T 14-10-2018 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 Gene3D G3DSA:3.40.50.2300 1 119 1.0E-33 T 14-10-2018 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 Pfam PF00158 Sigma-54 interaction domain 133 295 5.3E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 SMART SM00448 4 115 1.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 SUPERFAMILY SSF52172 3 173 1.42E-39 T 14-10-2018 IPR011006 CheY-like superfamily VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 Gene3D G3DSA:1.10.8.60 301 379 6.0E-30 T 14-10-2018 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 2.7E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 SMART SM00382 149 296 6.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0821 6c9725bb2c4b5e9bd277085c654f386e 469 Gene3D G3DSA:3.40.50.300 120 300 5.8E-64 T 14-10-2018 VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 289 454 7.4E-23 T 14-10-2018 IPR000160 GGDEF domain VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 Pfam PF11845 Protein of unknown function (DUF3365) 20 194 6.5E-15 T 14-10-2018 IPR021796 Protein of unknown function DUF3365 VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 Gene3D G3DSA:3.30.70.270 287 469 8.1E-34 T 14-10-2018 VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 SMART SM00052 467 714 8.6E-110 T 14-10-2018 IPR001633 EAL domain VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 SUPERFAMILY SSF141868 473 722 3.79E-85 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 Pfam PF00990 Diguanylate cyclase, GGDEF domain 293 451 8.3E-30 T 14-10-2018 IPR000160 GGDEF domain VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 SMART SM00267 282 457 1.7E-28 T 14-10-2018 IPR000160 GGDEF domain VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 Gene3D G3DSA:3.20.20.450 470 722 1.1E-91 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 SUPERFAMILY SSF55073 298 456 7.22E-26 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0045 2ffd3c938d05831aaa8f059bf9926cb5 731 Pfam PF00563 EAL domain 474 709 4.6E-71 T 14-10-2018 IPR001633 EAL domain VS_II0808 c90735171b9878773e1f64ee2e210ebe 434 SUPERFAMILY SSF53613 34 417 1.1E-43 T 14-10-2018 IPR029056 Ribokinase-like VS_II0808 c90735171b9878773e1f64ee2e210ebe 434 Gene3D G3DSA:3.40.1190.20 31 418 3.5E-44 T 14-10-2018 IPR029056 Ribokinase-like VS_II0808 c90735171b9878773e1f64ee2e210ebe 434 Pfam PF00294 pfkB family carbohydrate kinase 138 293 8.3E-12 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VS_2292 bd9910f458d6d4b2d978e1dca87eb226 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 7.1E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VS_2292 bd9910f458d6d4b2d978e1dca87eb226 169 Gene3D G3DSA:2.70.70.10 9 169 3.6E-61 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_2292 bd9910f458d6d4b2d978e1dca87eb226 169 SUPERFAMILY SSF51261 18 166 7.5E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_2292 bd9910f458d6d4b2d978e1dca87eb226 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VS_2292 bd9910f458d6d4b2d978e1dca87eb226 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.1E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 Pfam PF00072 Response regulator receiver domain 5 120 3.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 SUPERFAMILY SSF52172 4 122 1.42E-20 T 14-10-2018 IPR011006 CheY-like superfamily VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 Pfam PF00563 EAL domain 142 374 6.8E-49 T 14-10-2018 IPR001633 EAL domain VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 SMART SM00052 136 379 5.1E-59 T 14-10-2018 IPR001633 EAL domain VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 Gene3D G3DSA:3.20.20.450 139 397 1.6E-63 T 14-10-2018 IPR035919 EAL domain superfamily VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 SMART SM00448 3 120 4.5E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 Gene3D G3DSA:3.40.50.2300 2 135 2.4E-24 T 14-10-2018 VS_1156 5995d85e1668f4b9f95b71d57792aea4 401 SUPERFAMILY SSF141868 142 387 3.53E-61 T 14-10-2018 IPR035919 EAL domain superfamily VS_II1172 99a06a370df40dcb0743959adec30772 534 SUPERFAMILY SSF82861 277 363 5.75E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VS_II1172 99a06a370df40dcb0743959adec30772 534 Gene3D G3DSA:2.30.30.60 380 428 3.4E-17 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VS_II1172 99a06a370df40dcb0743959adec30772 534 Gene3D G3DSA:3.30.70.100 431 523 3.9E-27 T 14-10-2018 VS_II1172 99a06a370df40dcb0743959adec30772 534 Pfam PF00924 Mechanosensitive ion channel 327 519 4.8E-54 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VS_II1172 99a06a370df40dcb0743959adec30772 534 SUPERFAMILY SSF50182 364 430 4.9E-18 T 14-10-2018 IPR010920 LSM domain superfamily VS_II1172 99a06a370df40dcb0743959adec30772 534 SUPERFAMILY SSF82689 433 530 3.79E-33 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VS_1565 0c00493569cede7a56cc3ba393a3db45 611 Pfam PF00664 ABC transporter transmembrane region 51 316 4.2E-48 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_1565 0c00493569cede7a56cc3ba393a3db45 611 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1565 0c00493569cede7a56cc3ba393a3db45 611 SUPERFAMILY SSF52540 359 606 3.14E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1565 0c00493569cede7a56cc3ba393a3db45 611 Gene3D G3DSA:3.40.50.300 359 610 3.0E-91 T 14-10-2018 VS_1565 0c00493569cede7a56cc3ba393a3db45 611 Pfam PF00005 ABC transporter 387 535 8.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1565 0c00493569cede7a56cc3ba393a3db45 611 SUPERFAMILY SSF90123 39 346 1.31E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1565 0c00493569cede7a56cc3ba393a3db45 611 SMART SM00382 395 596 1.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1565 0c00493569cede7a56cc3ba393a3db45 611 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 32 606 5.4E-272 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein VS_1565 0c00493569cede7a56cc3ba393a3db45 611 Gene3D G3DSA:1.20.1560.10 33 354 1.0E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 1.5E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 SUPERFAMILY SSF54631 151 278 3.03E-25 T 14-10-2018 VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 Gene3D G3DSA:2.60.120.10 1 143 1.6E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 SMART SM00116 159 216 0.47 T 14-10-2018 IPR000644 CBS domain VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 SMART SM00116 233 280 4.3E-6 T 14-10-2018 IPR000644 CBS domain VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 Gene3D G3DSA:3.10.580.10 144 282 2.3E-31 T 14-10-2018 VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 Pfam PF00571 CBS domain 226 278 2.2E-10 T 14-10-2018 IPR000644 CBS domain VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 Pfam PF00571 CBS domain 152 214 1.4E-5 T 14-10-2018 IPR000644 CBS domain VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 SUPERFAMILY SSF51206 7 127 3.93E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 SMART SM00100 17 134 6.1E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.7E-45 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VS_1821 1ba7b76c51e40cd9dd3419c7fddfe2c7 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 3.1E-46 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VS_2483 5f8338e598d407ab121ea17bc7378697 495 SUPERFAMILY SSF54814 201 278 7.19E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Gene3D G3DSA:3.30.300.20 278 345 3.5E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_2483 5f8338e598d407ab121ea17bc7378697 495 SUPERFAMILY SSF50249 132 199 1.08E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2483 5f8338e598d407ab121ea17bc7378697 495 SUPERFAMILY SSF47794 356 415 2.51E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VS_2483 5f8338e598d407ab121ea17bc7378697 495 SUPERFAMILY SSF69705 1 126 1.16E-38 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Gene3D G3DSA:1.10.150.20 431 490 1.4E-23 T 14-10-2018 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.0E-7 T 14-10-2018 VS_2483 5f8338e598d407ab121ea17bc7378697 495 SMART SM00316 133 200 8.3E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Gene3D G3DSA:1.10.150.20 352 421 3.2E-29 T 14-10-2018 VS_2483 5f8338e598d407ab121ea17bc7378697 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.1E-16 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VS_2483 5f8338e598d407ab121ea17bc7378697 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.6E-21 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VS_2483 5f8338e598d407ab121ea17bc7378697 495 SUPERFAMILY SSF47794 429 492 1.49E-15 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VS_2483 5f8338e598d407ab121ea17bc7378697 495 SUPERFAMILY SSF54814 279 342 5.67E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Gene3D G3DSA:2.40.50.140 135 198 1.1E-17 T 14-10-2018 VS_2483 5f8338e598d407ab121ea17bc7378697 495 SMART SM00322 301 375 0.033 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VS_2483 5f8338e598d407ab121ea17bc7378697 495 SMART SM00322 230 293 15.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Pfam PF13184 NusA-like KH domain 230 297 2.1E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Gene3D G3DSA:3.30.300.20 199 277 1.1E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_2483 5f8338e598d407ab121ea17bc7378697 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.466 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Pfam PF08529 NusA N-terminal domain 4 123 9.4E-34 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VS_2483 5f8338e598d407ab121ea17bc7378697 495 Gene3D G3DSA:3.30.1480.10 1 129 4.1E-42 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VS_2483 5f8338e598d407ab121ea17bc7378697 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.1E-122 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 VS_2746 8f8adf9be512fb90fb2633e3cb7d5939 102 Pfam PF13466 STAS domain 16 92 3.7E-18 T 14-10-2018 IPR002645 STAS domain VS_2746 8f8adf9be512fb90fb2633e3cb7d5939 102 Gene3D G3DSA:3.30.750.24 14 100 3.7E-13 T 14-10-2018 IPR036513 STAS domain superfamily VS_2746 8f8adf9be512fb90fb2633e3cb7d5939 102 SUPERFAMILY SSF52091 11 96 3.73E-17 T 14-10-2018 IPR036513 STAS domain superfamily VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 SUPERFAMILY SSF55424 345 463 1.89E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 4.5E-29 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 4.5E-29 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.5E-29 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 4.5E-29 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.5E-29 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 SUPERFAMILY SSF51905 4 319 2.83E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 Gene3D G3DSA:3.50.50.60 157 275 1.1E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PIRSF PIRSF000350 1 463 1.4E-72 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.5E-52 T 14-10-2018 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 Gene3D G3DSA:3.50.50.60 7 332 1.1E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 9.7E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 9.4E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.836 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VS_3003 1e92cdebf5e987048ac2048aa53c900d 466 Gene3D G3DSA:3.30.390.30 345 464 2.6E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_2475 871febba27d844dacd40176d14777505 445 PIRSF PIRSF006603 1 441 3.1E-68 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2475 871febba27d844dacd40176d14777505 445 Pfam PF01554 MatE 15 176 1.7E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2475 871febba27d844dacd40176d14777505 445 Pfam PF01554 MatE 239 399 1.8E-13 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2475 871febba27d844dacd40176d14777505 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 409 2.5E-48 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 Gene3D G3DSA:3.30.450.210 31 155 2.1E-48 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 SUPERFAMILY SSF55874 294 456 1.83E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 Gene3D G3DSA:3.30.565.10 307 456 1.5E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 Gene3D G3DSA:1.10.287.130 192 305 1.4E-33 T 14-10-2018 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 SUPERFAMILY SSF158472 189 240 2.22E-5 T 14-10-2018 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 SUPERFAMILY SSF47384 228 302 2.55E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 SMART SM00387 348 458 4.8E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 SMART SM00388 242 304 3.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 302 1.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 455 4.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 SMART SM00304 188 241 2.9E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 Pfam PF00672 HAMP domain 189 236 2.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_2917 7c234d1aaa3fb4add3e9830b05ca8acb 459 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 166 4.6E-55 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 3.2E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.3E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.2E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 1.3E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 4.5E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 9.3E-16 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Gene3D G3DSA:3.30.1360.40 236 332 5.7E-234 T 14-10-2018 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 SUPERFAMILY SSF101904 532 853 7.59E-114 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Gene3D G3DSA:3.90.199.10 33 520 5.7E-234 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Gene3D G3DSA:2.120.10.90 534 840 2.9E-127 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.654 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Gene3D G3DSA:1.10.268.10 369 492 5.7E-234 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 SUPERFAMILY SSF56719 30 520 6.67E-186 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 14-10-2018 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 4.8E-155 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_1936 903b33dc0b0d33c9f4b7ccf6f4eabf75 890 SMART SM00434 11 498 3.1E-296 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VS_1211 985f92d325429140d2839144f3a660e1 227 Pfam PF11813 Protein of unknown function (DUF3334) 4 227 3.5E-116 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 VS_1211 985f92d325429140d2839144f3a660e1 227 SUPERFAMILY SSF103039 10 173 6.15E-24 T 14-10-2018 IPR028976 CheC-like superfamily VS_1211 985f92d325429140d2839144f3a660e1 227 Gene3D G3DSA:3.40.1550.10 3 176 9.6E-21 T 14-10-2018 IPR028976 CheC-like superfamily VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.1E-30 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 Pfam PF01678 Diaminopimelate epimerase 5 124 5.6E-33 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 Gene3D G3DSA:3.10.310.10 5 272 2.2E-105 T 14-10-2018 VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.064 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.5E-99 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 SUPERFAMILY SSF54506 2 274 1.05E-51 T 14-10-2018 VS_3047 8963c97f5e4dc25cee6e8c49c83eed53 276 Gene3D G3DSA:3.10.310.10 117 263 2.2E-105 T 14-10-2018 VS_1038 9e9045d9a2e69dd8b089da671a6c29fe 405 Gene3D G3DSA:3.30.420.40 91 387 2.3E-110 T 14-10-2018 VS_1038 9e9045d9a2e69dd8b089da671a6c29fe 405 Gene3D G3DSA:3.30.420.40 208 377 2.3E-110 T 14-10-2018 VS_1038 9e9045d9a2e69dd8b089da671a6c29fe 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VS_1038 9e9045d9a2e69dd8b089da671a6c29fe 405 SUPERFAMILY SSF46785 10 77 4.84E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1038 9e9045d9a2e69dd8b089da671a6c29fe 405 Pfam PF00480 ROK family 88 389 2.2E-69 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VS_1038 9e9045d9a2e69dd8b089da671a6c29fe 405 SUPERFAMILY SSF53067 86 395 2.54E-55 T 14-10-2018 VS_1038 9e9045d9a2e69dd8b089da671a6c29fe 405 Gene3D G3DSA:1.10.10.10 2 80 1.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 Gene3D G3DSA:3.40.720.10 20 424 1.1E-144 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 Gene3D G3DSA:3.30.70.1250 131 252 1.1E-144 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 SUPERFAMILY SSF143856 136 252 5.49E-46 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 TIGRFAM TIGR01696 deoB: phosphopentomutase 21 421 3.3E-170 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 Hamap MF_00740 Phosphopentomutase [deoB]. 19 424 52.718 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 Pfam PF01676 Metalloenzyme superfamily 20 415 8.5E-41 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 PIRSF PIRSF001491 18 424 2.2E-156 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VS_2461 8ccb9cc604cd9c564a0b7d0fd70d7741 424 SUPERFAMILY SSF53649 17 424 2.49E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_II1263 81f64ce55897fa04e29e2053b86be838 218 SUPERFAMILY SSF55821 9 213 2.04E-80 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VS_II1263 81f64ce55897fa04e29e2053b86be838 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.4E-77 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_II1263 81f64ce55897fa04e29e2053b86be838 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 1.8E-75 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_II1263 81f64ce55897fa04e29e2053b86be838 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 41.975 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_II1263 81f64ce55897fa04e29e2053b86be838 218 Gene3D G3DSA:3.90.870.10 6 218 2.3E-86 T 14-10-2018 VS_II1327 a9397842825924e26f5f083faeef42cf 382 SUPERFAMILY SSF50129 10 196 2.06E-71 T 14-10-2018 IPR011032 GroES-like superfamily VS_II1327 a9397842825924e26f5f083faeef42cf 382 SUPERFAMILY SSF50129 329 379 5.18E-11 T 14-10-2018 IPR011032 GroES-like superfamily VS_II1327 a9397842825924e26f5f083faeef42cf 382 Gene3D G3DSA:3.90.180.10 17 375 9.4E-151 T 14-10-2018 VS_II1327 a9397842825924e26f5f083faeef42cf 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 3.0E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VS_II1327 a9397842825924e26f5f083faeef42cf 382 Gene3D G3DSA:3.40.50.720 185 323 9.4E-151 T 14-10-2018 VS_II1327 a9397842825924e26f5f083faeef42cf 382 Pfam PF00107 Zinc-binding dehydrogenase 208 337 2.5E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VS_II1327 a9397842825924e26f5f083faeef42cf 382 SMART SM00829 23 378 0.0083 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VS_II1327 a9397842825924e26f5f083faeef42cf 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VS_II1327 a9397842825924e26f5f083faeef42cf 382 SUPERFAMILY SSF51735 171 345 4.59E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II1327 a9397842825924e26f5f083faeef42cf 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 8.2E-226 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 VS_1298 65faa91a822d9b80865bc0d45bde335a 425 Pfam PF12698 ABC-2 family transporter protein 48 393 2.2E-46 T 14-10-2018 VS_II0762 af5ab13e4b893d2e61b8856f2988ee4d 557 SUPERFAMILY SSF52540 226 410 2.2E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0762 af5ab13e4b893d2e61b8856f2988ee4d 557 Pfam PF09818 Predicted ATPase of the ABC class 1 434 1.5E-180 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 SUPERFAMILY SSF46689 5 85 9.75E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 200 5.3E-16 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 Gene3D G3DSA:1.10.10.60 4 60 4.1E-23 T 14-10-2018 VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.1E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 Gene3D G3DSA:1.10.357.10 62 202 2.0E-34 T 14-10-2018 VS_2088 2d510b92c7c30d8134c73fca5ea97b5c 202 SUPERFAMILY SSF48498 104 198 1.0E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_1947 a34602eed1f24488adb49f76656025f0 1006 Gene3D G3DSA:3.40.640.10 612 880 7.8E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1947 a34602eed1f24488adb49f76656025f0 1006 Gene3D G3DSA:3.90.1150.10 69 494 3.3E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1947 a34602eed1f24488adb49f76656025f0 1006 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 66 497 5.6E-156 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VS_1947 a34602eed1f24488adb49f76656025f0 1006 Gene3D G3DSA:1.20.1650.10 495 597 8.2E-38 T 14-10-2018 VS_1947 a34602eed1f24488adb49f76656025f0 1006 SUPERFAMILY SSF53383 552 1000 3.48E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1947 a34602eed1f24488adb49f76656025f0 1006 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 578 928 5.6E-62 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VS_1947 a34602eed1f24488adb49f76656025f0 1006 Pfam PF00202 Aminotransferase class-III 83 496 8.0E-94 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_1947 a34602eed1f24488adb49f76656025f0 1006 Gene3D G3DSA:3.90.1150.10 598 992 7.8E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1947 a34602eed1f24488adb49f76656025f0 1006 SUPERFAMILY SSF53383 73 496 3.46E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1947 a34602eed1f24488adb49f76656025f0 1006 Gene3D G3DSA:3.40.640.10 119 387 3.3E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1947 a34602eed1f24488adb49f76656025f0 1006 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 816 837 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 VS_II0155 dff232f9a0862f29772cb764601de931 247 SUPERFAMILY SSF53335 17 151 1.01E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II0155 dff232f9a0862f29772cb764601de931 247 PIRSF PIRSF028234 1 247 3.3E-83 T 14-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 VS_II0155 dff232f9a0862f29772cb764601de931 247 Pfam PF12847 Methyltransferase domain 3 166 2.7E-26 T 14-10-2018 VS_II0155 dff232f9a0862f29772cb764601de931 247 Gene3D G3DSA:3.40.50.150 1 173 6.1E-49 T 14-10-2018 VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.204 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 Pfam PF00501 AMP-binding enzyme 84 522 3.3E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 Gene3D G3DSA:3.40.50.12780 51 515 6.0E-101 T 14-10-2018 VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 5.5E-21 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 Gene3D G3DSA:3.30.300.30 518 649 2.2E-29 T 14-10-2018 VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 SUPERFAMILY SSF56801 9 643 4.58E-180 T 14-10-2018 VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 6.5E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VS_2942 3bc06c9b8903a1dda5b61e6de7c1c768 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VS_1472 670895c6f76eb643d0ced720f95a2d86 308 Gene3D G3DSA:1.10.530.10 163 306 5.1E-15 T 14-10-2018 VS_1472 670895c6f76eb643d0ced720f95a2d86 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 167 303 1.0E-15 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 8.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 Pfam PF03466 LysR substrate binding domain 126 297 1.5E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 SUPERFAMILY SSF46785 5 88 9.07E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 SUPERFAMILY SSF53850 126 296 1.19E-30 T 14-10-2018 VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 Gene3D G3DSA:3.40.190.10 95 292 4.5E-36 T 14-10-2018 VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 Gene3D G3DSA:1.10.10.10 1 90 7.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0093 7effe96ae565a4e1749e8aa8d888f524 304 Gene3D G3DSA:3.40.190.10 171 269 4.5E-36 T 14-10-2018 VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 80 202 1.6E-8 T 14-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 8.4E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 SUPERFAMILY SSF46689 20 85 7.98E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.5E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.5E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 Gene3D G3DSA:1.10.357.10 17 205 7.9E-67 T 14-10-2018 VS_0065 e77158a4a2dbc8144c8c388b958ae48c 205 SUPERFAMILY SSF48498 95 203 5.52E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_II0454 a71f014de44aa4e67be1e64d8db1e1c3 521 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 19 510 9.1E-236 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VS_II0454 a71f014de44aa4e67be1e64d8db1e1c3 521 PIRSF PIRSF028991 13 521 8.3E-284 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VS_II0454 a71f014de44aa4e67be1e64d8db1e1c3 521 Pfam PF11230 Protein of unknown function (DUF3029) 29 510 3.7E-232 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VS_II0454 a71f014de44aa4e67be1e64d8db1e1c3 521 SUPERFAMILY SSF51998 26 473 1.13E-96 T 14-10-2018 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.9E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.9E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.9E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.9E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 SUPERFAMILY SSF53671 4 307 2.88E-102 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.0E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.0E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.0E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.0E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.0E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.0E-36 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.5E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 Gene3D G3DSA:3.40.50.1370 135 292 9.2E-120 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 Gene3D G3DSA:3.40.50.1370 8 304 9.2E-120 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 7.6E-33 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.655 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2740 4aa4ad417e9a3ba6a23be0401cba0ad9 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 6.9E-116 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 Gene3D G3DSA:1.10.40.30 421 470 1.4E-28 T 14-10-2018 VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 SUPERFAMILY SSF48557 14 468 7.95E-142 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 1.3E-252 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 Pfam PF10415 Fumarase C C-terminus 421 474 7.5E-18 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 2.7E-25 T 14-10-2018 IPR000362 Fumarate lyase family VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-25 T 14-10-2018 IPR000362 Fumarate lyase family VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 2.7E-25 T 14-10-2018 IPR000362 Fumarate lyase family VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 2.7E-25 T 14-10-2018 IPR000362 Fumarate lyase family VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 Gene3D G3DSA:1.10.275.10 16 152 4.7E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 Gene3D G3DSA:1.20.200.10 153 420 2.7E-111 T 14-10-2018 VS_2921 011bdfd05fdc1ae51cd1033ab70526f6 483 Pfam PF00206 Lyase 23 355 8.4E-102 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VS_0329 16b7964c3744d84b8cf4107af8ad43cd 279 Pfam PF13401 AAA domain 42 168 7.3E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0329 16b7964c3744d84b8cf4107af8ad43cd 279 Gene3D G3DSA:3.40.50.300 28 183 1.3E-13 T 14-10-2018 VS_0329 16b7964c3744d84b8cf4107af8ad43cd 279 SUPERFAMILY SSF52540 6 260 2.03E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0452 7db69375be15c0bf1256dd4cde6d6c7d 292 SUPERFAMILY SSF53850 96 287 4.89E-19 T 14-10-2018 VS_II0452 7db69375be15c0bf1256dd4cde6d6c7d 292 Pfam PF03466 LysR substrate binding domain 111 287 5.3E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0452 7db69375be15c0bf1256dd4cde6d6c7d 292 Gene3D G3DSA:3.40.190.290 92 284 1.3E-33 T 14-10-2018 VS_II0452 7db69375be15c0bf1256dd4cde6d6c7d 292 Gene3D G3DSA:1.10.10.10 1 90 2.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0452 7db69375be15c0bf1256dd4cde6d6c7d 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0452 7db69375be15c0bf1256dd4cde6d6c7d 292 SUPERFAMILY SSF46785 1 84 1.95E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF52172 1339 1456 2.85E-32 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SMART SM00448 1341 1452 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SMART SM00387 1200 1316 3.0E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1200 1314 2.3E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF47384 1071 1154 3.92E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 691 905 7.7E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1088 1153 6.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.40.190.10 74 299 2.3E-32 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SMART SM00062 690 909 0.0012 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:1.10.287.130 1068 1151 7.6E-27 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.40.190.10 681 905 1.0E-43 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Pfam PF01627 Hpt domain 1515 1586 7.9E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Pfam PF00072 Response regulator receiver domain 1343 1449 6.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.40.190.10 167 262 2.3E-32 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.40.190.10 776 868 1.0E-43 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 89 301 1.0E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF53850 683 906 9.96E-25 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.40.190.10 390 490 8.7E-8 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.30.450.20 960 1067 1.4E-7 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF47226 1494 1586 1.15E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.40.50.2300 1324 1455 2.4E-35 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.30.565.10 1152 1319 3.9E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF55874 1142 1313 1.57E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:1.20.120.160 1493 1602 7.2E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF53850 313 517 4.98E-9 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SMART SM00388 1088 1153 3.4E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1259 1269 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1241 1255 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1276 1294 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1300 1313 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF53850 74 303 2.63E-22 T 14-10-2018 VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 SUPERFAMILY SSF55785 979 1077 1.41E-8 T 14-10-2018 IPR035965 PAS domain superfamily VS_II1065 a2a58cabaab32aa6174a25adfc989965 1688 Gene3D G3DSA:3.40.190.10 318 516 8.7E-8 T 14-10-2018 VS_2265 8f2034380066fc5f620ee138e6d7dc11 168 SUPERFAMILY SSF50104 113 164 8.27E-5 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VS_2265 8f2034380066fc5f620ee138e6d7dc11 168 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 164 6.0E-61 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VS_2265 8f2034380066fc5f620ee138e6d7dc11 168 SMART SM00738 1 101 1.4E-26 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_2265 8f2034380066fc5f620ee138e6d7dc11 168 Gene3D G3DSA:3.30.70.940 1 166 1.1E-50 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_2265 8f2034380066fc5f620ee138e6d7dc11 168 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 167 47.287 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VS_2265 8f2034380066fc5f620ee138e6d7dc11 168 Pfam PF02357 Transcription termination factor nusG 2 94 2.0E-21 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_2265 8f2034380066fc5f620ee138e6d7dc11 168 SUPERFAMILY SSF82679 1 99 1.7E-29 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VS_0846 51de9e059ea0f0b4f937a7cd03bf100e 389 PIRSF PIRSF020479 12 389 7.5E-119 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VS_0846 51de9e059ea0f0b4f937a7cd03bf100e 389 SMART SM00260 242 376 2.7E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_0846 51de9e059ea0f0b4f937a7cd03bf100e 389 Pfam PF01584 CheW-like domain 246 377 9.7E-14 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_0846 51de9e059ea0f0b4f937a7cd03bf100e 389 SUPERFAMILY SSF50341 242 378 3.27E-13 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VS_0756 7bd8437869e8adae5d472fd8d2d821d3 284 SUPERFAMILY SSF51569 4 280 8.33E-105 T 14-10-2018 VS_0756 7bd8437869e8adae5d472fd8d2d821d3 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 276 4.7E-116 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_0756 7bd8437869e8adae5d472fd8d2d821d3 284 Gene3D G3DSA:3.20.20.70 1 284 2.5E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0756 7bd8437869e8adae5d472fd8d2d821d3 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 278 48.468 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_0756 7bd8437869e8adae5d472fd8d2d821d3 284 Pfam PF00793 DAHP synthetase I family 13 275 5.4E-70 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_II0561 8b961864b9a6493dab5f476c700f7261 203 Gene3D G3DSA:3.30.1330.60 67 202 2.4E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_II0561 8b961864b9a6493dab5f476c700f7261 203 ProSitePatterns PS01068 OmpA-like domain. 131 175 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VS_II0561 8b961864b9a6493dab5f476c700f7261 203 Pfam PF00691 OmpA family 98 193 2.5E-16 T 14-10-2018 IPR006665 OmpA-like domain VS_II0561 8b961864b9a6493dab5f476c700f7261 203 PRINTS PR01021 OMPA domain signature 129 144 4.2E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II0561 8b961864b9a6493dab5f476c700f7261 203 PRINTS PR01021 OMPA domain signature 99 121 4.2E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II0561 8b961864b9a6493dab5f476c700f7261 203 PRINTS PR01021 OMPA domain signature 144 160 4.2E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II0561 8b961864b9a6493dab5f476c700f7261 203 SUPERFAMILY SSF103088 87 199 1.2E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_2872 143b0f8ada5651de1832125adacaa477 172 Gene3D G3DSA:3.40.50.300 1 172 3.1E-55 T 14-10-2018 VS_2872 143b0f8ada5651de1832125adacaa477 172 Pfam PF01202 Shikimate kinase 13 169 4.9E-56 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VS_2872 143b0f8ada5651de1832125adacaa477 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VS_2872 143b0f8ada5651de1832125adacaa477 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.151 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VS_2872 143b0f8ada5651de1832125adacaa477 172 PRINTS PR01100 Shikimate kinase family signature 77 86 2.7E-29 T 14-10-2018 VS_2872 143b0f8ada5651de1832125adacaa477 172 PRINTS PR01100 Shikimate kinase family signature 59 67 2.7E-29 T 14-10-2018 VS_2872 143b0f8ada5651de1832125adacaa477 172 PRINTS PR01100 Shikimate kinase family signature 7 22 2.7E-29 T 14-10-2018 VS_2872 143b0f8ada5651de1832125adacaa477 172 PRINTS PR01100 Shikimate kinase family signature 31 44 2.7E-29 T 14-10-2018 VS_2872 143b0f8ada5651de1832125adacaa477 172 PRINTS PR01100 Shikimate kinase family signature 98 115 2.7E-29 T 14-10-2018 VS_2872 143b0f8ada5651de1832125adacaa477 172 SUPERFAMILY SSF52540 4 169 3.55E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0743 a0440dc4071f9c9feadd7c75ea255b18 103 Pfam PF01253 Translation initiation factor SUI1 27 97 2.3E-18 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VS_II0743 a0440dc4071f9c9feadd7c75ea255b18 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 5.8E-39 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VS_II0743 a0440dc4071f9c9feadd7c75ea255b18 103 Gene3D G3DSA:3.30.780.10 23 103 1.3E-32 T 14-10-2018 VS_II0743 a0440dc4071f9c9feadd7c75ea255b18 103 PIRSF PIRSF037511 1 103 9.6E-34 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VS_II0743 a0440dc4071f9c9feadd7c75ea255b18 103 SUPERFAMILY SSF55159 3 99 9.42E-27 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VS_1324 6d752b53b2619b41457c8f0c91abd84a 332 Pfam PF04392 ABC transporter substrate binding protein 40 320 1.8E-33 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein VS_1324 6d752b53b2619b41457c8f0c91abd84a 332 Gene3D G3DSA:3.40.50.2300 36 297 2.3E-44 T 14-10-2018 VS_1324 6d752b53b2619b41457c8f0c91abd84a 332 Gene3D G3DSA:3.40.50.2300 140 320 2.3E-44 T 14-10-2018 VS_II0187 2af2ec6dff4bd80e98eed9bc3b1992e2 279 Pfam PF02361 Cobalt transport protein 16 237 1.2E-30 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component VS_0176 49893fb0cb4871ed9fb87918743f4342 355 Pfam PF08340 Domain of unknown function (DUF1732) 271 355 5.9E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 VS_0176 49893fb0cb4871ed9fb87918743f4342 355 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 68 355 7.6E-115 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VS_0176 49893fb0cb4871ed9fb87918743f4342 355 Pfam PF03755 YicC-like family, N-terminal region 69 221 2.4E-43 T 14-10-2018 IPR013527 YicC-like, N-terminal VS_2745 8be947e2d0f6230100c90192263e526c 84 PIRSF PIRSF003113 2 83 1.0E-20 T 14-10-2018 IPR002634 BolA protein VS_2745 8be947e2d0f6230100c90192263e526c 84 Pfam PF01722 BolA-like protein 21 74 7.1E-14 T 14-10-2018 IPR002634 BolA protein VS_2745 8be947e2d0f6230100c90192263e526c 84 SUPERFAMILY SSF82657 4 82 1.01E-27 T 14-10-2018 IPR036065 BolA-like superfamily VS_2745 8be947e2d0f6230100c90192263e526c 84 Gene3D G3DSA:3.30.300.90 1 84 2.3E-31 T 14-10-2018 VS_0598 3e81e6e7f644eca8b6215ceff1ea8285 350 Gene3D G3DSA:3.40.1780.10 14 345 8.7E-117 T 14-10-2018 VS_0598 3e81e6e7f644eca8b6215ceff1ea8285 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.8E-133 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VS_0598 3e81e6e7f644eca8b6215ceff1ea8285 350 Gene3D G3DSA:2.40.10.240 64 163 8.7E-117 T 14-10-2018 VS_0598 3e81e6e7f644eca8b6215ceff1ea8285 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 346 5.8E-157 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VS_0598 3e81e6e7f644eca8b6215ceff1ea8285 350 SUPERFAMILY SSF111337 1 345 1.31E-137 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VS_0598 3e81e6e7f644eca8b6215ceff1ea8285 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.069 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VS_II1307 048cc108b49984fc22d0e928c8d22c68 187 Pfam PF13508 Acetyltransferase (GNAT) domain 56 139 1.0E-7 T 14-10-2018 IPR000182 GNAT domain VS_II1307 048cc108b49984fc22d0e928c8d22c68 187 Gene3D G3DSA:3.40.630.30 1 185 5.7E-26 T 14-10-2018 VS_II1307 048cc108b49984fc22d0e928c8d22c68 187 SUPERFAMILY SSF55729 5 146 6.07E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II1191 d9bda540056b50f7760185adf5e3bd76 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 14 70 9.5E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VS_II1191 d9bda540056b50f7760185adf5e3bd76 95 Gene3D G3DSA:3.30.70.100 4 92 1.6E-14 T 14-10-2018 VS_II1191 d9bda540056b50f7760185adf5e3bd76 95 SUPERFAMILY SSF54909 3 81 4.13E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_0166 e3e276e61dffdfac0595931e2309d920 476 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 21 471 1.5E-98 T 14-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 VS_0166 e3e276e61dffdfac0595931e2309d920 476 Gene3D G3DSA:3.30.70.360 213 304 1.4E-119 T 14-10-2018 VS_0166 e3e276e61dffdfac0595931e2309d920 476 Gene3D G3DSA:3.30.70.360 193 390 1.4E-119 T 14-10-2018 VS_0166 e3e276e61dffdfac0595931e2309d920 476 SUPERFAMILY SSF55031 193 392 1.88E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VS_0166 e3e276e61dffdfac0595931e2309d920 476 Gene3D G3DSA:3.40.630.10 21 476 1.4E-119 T 14-10-2018 VS_0166 e3e276e61dffdfac0595931e2309d920 476 Pfam PF01546 Peptidase family M20/M25/M40 91 473 1.6E-21 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VS_0166 e3e276e61dffdfac0595931e2309d920 476 SUPERFAMILY SSF53187 9 475 1.2E-54 T 14-10-2018 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 Gene3D G3DSA:2.40.50.100 302 336 7.4E-11 T 14-10-2018 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 Gene3D G3DSA:2.40.30.170 339 426 7.4E-11 T 14-10-2018 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 Pfam PF13437 HlyD family secretion protein 302 402 1.4E-13 T 14-10-2018 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 Gene3D G3DSA:1.10.287.470 230 301 7.4E-11 T 14-10-2018 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 41 449 2.5E-88 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 448 2.0E-29 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 2.0E-29 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 413 428 2.0E-29 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 2.0E-29 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 2.0E-29 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 69 2.0E-29 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0858 da486e2257145da28b6bf025c3cac6b4 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 2.0E-29 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_1638 171831ff7bc2346ce25adb49ccbe8d94 332 Gene3D G3DSA:1.20.1510.10 19 164 4.8E-22 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VS_1638 171831ff7bc2346ce25adb49ccbe8d94 332 Gene3D G3DSA:1.20.1510.10 177 252 1.6E-10 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VS_1638 171831ff7bc2346ce25adb49ccbe8d94 332 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 324 7.7E-66 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VS_1638 171831ff7bc2346ce25adb49ccbe8d94 332 Pfam PF01545 Cation efflux family 23 252 1.5E-34 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VS_1638 171831ff7bc2346ce25adb49ccbe8d94 332 SUPERFAMILY SSF161111 15 253 1.16E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VS_1122 84909c79a6c5b894a297d0afbcdf6c03 271 Gene3D G3DSA:3.40.50.80 131 270 2.4E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_1122 84909c79a6c5b894a297d0afbcdf6c03 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 127 1.5E-31 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VS_1122 84909c79a6c5b894a297d0afbcdf6c03 271 SUPERFAMILY SSF63380 9 131 2.45E-6 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_1122 84909c79a6c5b894a297d0afbcdf6c03 271 Pfam PF04954 Siderophore-interacting protein 134 253 2.2E-34 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VS_1122 84909c79a6c5b894a297d0afbcdf6c03 271 Gene3D G3DSA:2.40.30.10 2 127 3.7E-30 T 14-10-2018 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 SUPERFAMILY SSF46626 326 433 2.18E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 SUPERFAMILY SSF46626 194 295 5.65E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 322 404 1.3E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 Gene3D G3DSA:1.10.760.10 24 146 1.8E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 Gene3D G3DSA:1.10.760.10 314 432 7.8E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 Pfam PF00034 Cytochrome c 41 139 1.3E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 SUPERFAMILY SSF46626 37 156 1.0E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 PIRSF PIRSF000018 1 38 0.19 T 14-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 VS_II0896 cfba608f8af9f8900a0a26ffe835a864 453 PIRSF PIRSF000018 23 436 1.2E-108 T 14-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 VS_1972 a4b70a9c489822280862b462df9d115e 265 PRINTS PR00721 Stomatin signature 128 151 2.0E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_1972 a4b70a9c489822280862b462df9d115e 265 PRINTS PR00721 Stomatin signature 108 125 2.0E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_1972 a4b70a9c489822280862b462df9d115e 265 PRINTS PR00721 Stomatin signature 73 94 2.0E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_1972 a4b70a9c489822280862b462df9d115e 265 PRINTS PR00721 Stomatin signature 196 219 2.0E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_1972 a4b70a9c489822280862b462df9d115e 265 PRINTS PR00721 Stomatin signature 26 48 2.0E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_1972 a4b70a9c489822280862b462df9d115e 265 PRINTS PR00721 Stomatin signature 171 192 2.0E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_1972 a4b70a9c489822280862b462df9d115e 265 PRINTS PR00721 Stomatin signature 152 170 2.0E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_1972 a4b70a9c489822280862b462df9d115e 265 SMART SM00244 19 176 4.8E-62 T 14-10-2018 IPR001107 Band 7 domain VS_1972 a4b70a9c489822280862b462df9d115e 265 Gene3D G3DSA:3.30.479.30 47 178 7.2E-49 T 14-10-2018 VS_1972 a4b70a9c489822280862b462df9d115e 265 Pfam PF01145 SPFH domain / Band 7 family 24 192 2.9E-35 T 14-10-2018 IPR001107 Band 7 domain VS_1972 a4b70a9c489822280862b462df9d115e 265 SUPERFAMILY SSF117892 50 183 8.11E-45 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VS_II1087 c6b87c2c3323a829139900cc9c7733b3 318 Gene3D G3DSA:3.40.190.10 111 211 5.7E-72 T 14-10-2018 VS_II1087 c6b87c2c3323a829139900cc9c7733b3 318 SUPERFAMILY SSF53850 31 313 1.06E-50 T 14-10-2018 VS_II1087 c6b87c2c3323a829139900cc9c7733b3 318 Pfam PF09084 NMT1/THI5 like 39 251 5.5E-69 T 14-10-2018 IPR015168 SsuA/THI5-like VS_II1087 c6b87c2c3323a829139900cc9c7733b3 318 Gene3D G3DSA:3.40.190.10 29 304 5.7E-72 T 14-10-2018 VS_II0118 50aea42b7e2d2ec3391cb61e59b8823d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 55 1.9E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0118 50aea42b7e2d2ec3391cb61e59b8823d 288 Gene3D G3DSA:1.10.10.10 1 77 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0118 50aea42b7e2d2ec3391cb61e59b8823d 288 Gene3D G3DSA:3.40.190.290 85 285 1.2E-38 T 14-10-2018 VS_II0118 50aea42b7e2d2ec3391cb61e59b8823d 288 Pfam PF03466 LysR substrate binding domain 80 281 2.6E-17 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0118 50aea42b7e2d2ec3391cb61e59b8823d 288 SUPERFAMILY SSF46785 1 78 5.17E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0118 50aea42b7e2d2ec3391cb61e59b8823d 288 SUPERFAMILY SSF53850 81 286 2.17E-27 T 14-10-2018 VS_II1501 096707ad333df5ea83892dc36d586a74 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VS_II1501 096707ad333df5ea83892dc36d586a74 291 Gene3D G3DSA:1.10.1040.10 163 290 1.1E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VS_II1501 096707ad333df5ea83892dc36d586a74 291 Gene3D G3DSA:3.40.50.720 1 162 9.6E-50 T 14-10-2018 VS_II1501 096707ad333df5ea83892dc36d586a74 291 SUPERFAMILY SSF51735 1 163 3.94E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II1501 096707ad333df5ea83892dc36d586a74 291 SUPERFAMILY SSF48179 164 286 1.7E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_II1501 096707ad333df5ea83892dc36d586a74 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 1.9E-47 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VS_II1501 096707ad333df5ea83892dc36d586a74 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 1.7E-31 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VS_II1501 096707ad333df5ea83892dc36d586a74 291 PIRSF PIRSF000103 1 291 9.5E-73 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 1.3E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 PIRSF PIRSF000429 1 402 1.6E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 Gene3D G3DSA:3.40.47.10 7 276 9.7E-146 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 Gene3D G3DSA:3.40.47.10 126 397 9.7E-146 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 Pfam PF02803 Thiolase, C-terminal domain 271 399 5.8E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 Pfam PF00108 Thiolase, N-terminal domain 4 263 6.6E-94 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 SUPERFAMILY SSF53901 4 270 8.77E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_II0585 b7eb3011430a38407396a3b2c9e0206e 403 SUPERFAMILY SSF53901 271 398 2.13E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.3E-10 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.3E-10 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.3E-10 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.194 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 Gene3D G3DSA:1.20.20.10 1 78 1.2E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 SUPERFAMILY SSF81333 2 76 7.98E-17 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 Pfam PF00137 ATP synthase subunit C 11 73 1.1E-8 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VS_II0909 22a39d3b3fdb6270c4c739ee989d7c6e 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.6E-27 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 Pfam PF01225 Mur ligase family, catalytic domain 28 107 4.0E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 423 1.4E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 Pfam PF08245 Mur ligase middle domain 117 317 2.7E-51 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 SUPERFAMILY SSF53623 109 338 1.96E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 34.305 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 Gene3D G3DSA:3.40.1190.10 110 341 1.5E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 SUPERFAMILY SSF53244 339 491 7.17E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 491 4.3E-172 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 SUPERFAMILY SSF63418 6 108 1.44E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 Gene3D G3DSA:3.40.1390.10 4 109 1.0E-27 T 14-10-2018 VS_0445 90064d8d365a717f0bd4793b4fff18b0 494 Gene3D G3DSA:3.90.190.20 342 493 1.9E-54 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_2477 71a94756af596623c4355a888b001bc3 307 SUPERFAMILY SSF48452 33 282 4.51E-65 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2477 71a94756af596623c4355a888b001bc3 307 Gene3D G3DSA:1.25.40.10 24 292 1.1E-81 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2477 71a94756af596623c4355a888b001bc3 307 PIRSF PIRSF004654 1 293 3.6E-87 T 14-10-2018 IPR023605 Lipoprotein NlpI VS_2477 71a94756af596623c4355a888b001bc3 307 SMART SM00028 236 269 67.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2477 71a94756af596623c4355a888b001bc3 307 SMART SM00028 99 132 0.015 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2477 71a94756af596623c4355a888b001bc3 307 SMART SM00028 65 98 1.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0334 b8da453156bd3a18c2763aac20fb65bd 335 SMART SM00342 247 328 9.4E-10 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0334 b8da453156bd3a18c2763aac20fb65bd 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 195 2.0E-12 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VS_II0334 b8da453156bd3a18c2763aac20fb65bd 335 Gene3D G3DSA:1.10.10.60 234 334 4.3E-15 T 14-10-2018 VS_II0334 b8da453156bd3a18c2763aac20fb65bd 335 SUPERFAMILY SSF46689 286 331 7.17E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0334 b8da453156bd3a18c2763aac20fb65bd 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 2.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0334 b8da453156bd3a18c2763aac20fb65bd 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 2.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0334 b8da453156bd3a18c2763aac20fb65bd 335 Pfam PF12833 Helix-turn-helix domain 257 330 3.4E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_0680 854a0c46bb2d4694048c32c1d3ea89d5 367 SMART SM00925 119 252 1.0E-64 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VS_0680 854a0c46bb2d4694048c32c1d3ea89d5 367 SUPERFAMILY SSF50685 24 349 1.46E-98 T 14-10-2018 IPR036908 RlpA-like domain superfamily VS_0680 854a0c46bb2d4694048c32c1d3ea89d5 367 Pfam PF06725 3D domain 272 348 4.2E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VS_0680 854a0c46bb2d4694048c32c1d3ea89d5 367 Gene3D G3DSA:2.40.40.10 52 348 1.8E-131 T 14-10-2018 IPR036908 RlpA-like domain superfamily VS_0680 854a0c46bb2d4694048c32c1d3ea89d5 367 Pfam PF03562 MltA specific insert domain 100 251 2.2E-37 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VS_0680 854a0c46bb2d4694048c32c1d3ea89d5 367 Gene3D G3DSA:2.40.240.50 119 257 1.8E-131 T 14-10-2018 VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 SMART SM00344 3 112 7.6E-36 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 SUPERFAMILY SSF46785 2 62 1.47E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 4.6E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.3E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.3E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.3E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 SUPERFAMILY SSF54909 66 151 2.95E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 49 6.5E-18 T 14-10-2018 VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 Gene3D G3DSA:1.10.10.10 1 56 8.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1057 a8e852b40b06947499bfbc8bfda2275d 155 Gene3D G3DSA:3.30.70.920 57 140 8.9E-20 T 14-10-2018 VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 Gene3D G3DSA:1.20.81.30 258 371 3.9E-27 T 14-10-2018 VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 Gene3D G3DSA:1.20.81.30 59 177 1.7E-30 T 14-10-2018 VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 2.5E-26 T 14-10-2018 IPR018076 Type II secretion system F domain VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 2.1E-28 T 14-10-2018 IPR018076 Type II secretion system F domain VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 2.5E-8 T 14-10-2018 IPR003004 GspF/PilC family VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 2.5E-8 T 14-10-2018 IPR003004 GspF/PilC family VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 2.5E-8 T 14-10-2018 IPR003004 GspF/PilC family VS_0332 9819d529c8349b1c54c6f88985a09ce3 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 2.5E-8 T 14-10-2018 IPR003004 GspF/PilC family VS_II0162 b46566bb86b73525e80e93b5482f7704 392 Gene3D G3DSA:3.40.190.10 341 353 1.1E-12 T 14-10-2018 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 SUPERFAMILY SSF53850 23 391 1.4E-90 T 14-10-2018 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 327 2.9E-45 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_II0162 b46566bb86b73525e80e93b5482f7704 392 Gene3D G3DSA:3.40.190.10 24 338 8.7E-132 T 14-10-2018 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 147 166 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 66 84 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 295 316 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 167 186 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 353 372 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 32 50 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 126 145 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 PRINTS PR00181 Maltose binding protein signature 229 248 1.2E-61 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 Gene3D G3DSA:3.40.190.10 134 279 8.7E-132 T 14-10-2018 VS_II0162 b46566bb86b73525e80e93b5482f7704 392 Gene3D G3DSA:3.40.190.10 354 392 1.1E-12 T 14-10-2018 VS_2131 036a44ef06091117cce998548dff8095 194 SUPERFAMILY SSF56925 22 194 1.23E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_2131 036a44ef06091117cce998548dff8095 194 Pfam PF01389 OmpA-like transmembrane domain 90 153 6.5E-5 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VS_2131 036a44ef06091117cce998548dff8095 194 Gene3D G3DSA:2.40.160.20 13 194 1.2E-12 T 14-10-2018 VS_2855 e52c2228b9478dc099af092157204e11 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_2855 e52c2228b9478dc099af092157204e11 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_2855 e52c2228b9478dc099af092157204e11 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_2855 e52c2228b9478dc099af092157204e11 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VS_2855 e52c2228b9478dc099af092157204e11 210 SUPERFAMILY SSF51206 8 137 1.13E-34 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_2855 e52c2228b9478dc099af092157204e11 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VS_2855 e52c2228b9478dc099af092157204e11 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VS_2855 e52c2228b9478dc099af092157204e11 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_2855 e52c2228b9478dc099af092157204e11 210 Gene3D G3DSA:2.60.120.10 10 138 4.7E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_2855 e52c2228b9478dc099af092157204e11 210 SMART SM00419 160 208 4.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_2855 e52c2228b9478dc099af092157204e11 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2855 e52c2228b9478dc099af092157204e11 210 SMART SM00100 2 122 3.7E-27 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_2855 e52c2228b9478dc099af092157204e11 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0249 884ed89347ec8e948691fe742de03d3c 728 SMART SM00304 217 269 5.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0249 884ed89347ec8e948691fe742de03d3c 728 SMART SM00267 264 448 1.7E-53 T 14-10-2018 IPR000160 GGDEF domain VS_II0249 884ed89347ec8e948691fe742de03d3c 728 Gene3D G3DSA:1.20.1480.50 177 271 8.8E-14 T 14-10-2018 VS_II0249 884ed89347ec8e948691fe742de03d3c 728 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 446 4.0E-39 T 14-10-2018 IPR000160 GGDEF domain VS_II0249 884ed89347ec8e948691fe742de03d3c 728 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 443 1.2E-39 T 14-10-2018 IPR000160 GGDEF domain VS_II0249 884ed89347ec8e948691fe742de03d3c 728 Pfam PF00563 EAL domain 464 702 6.2E-71 T 14-10-2018 IPR001633 EAL domain VS_II0249 884ed89347ec8e948691fe742de03d3c 728 Gene3D G3DSA:3.30.70.270 272 460 1.6E-54 T 14-10-2018 VS_II0249 884ed89347ec8e948691fe742de03d3c 728 SUPERFAMILY SSF158472 219 266 4.97E-8 T 14-10-2018 VS_II0249 884ed89347ec8e948691fe742de03d3c 728 SUPERFAMILY SSF55073 280 450 1.65E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0249 884ed89347ec8e948691fe742de03d3c 728 Gene3D G3DSA:3.20.20.450 461 722 1.7E-89 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0249 884ed89347ec8e948691fe742de03d3c 728 Pfam PF00672 HAMP domain 218 260 1.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0249 884ed89347ec8e948691fe742de03d3c 728 SUPERFAMILY SSF141868 464 713 3.01E-82 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0249 884ed89347ec8e948691fe742de03d3c 728 SMART SM00052 458 707 1.2E-99 T 14-10-2018 IPR001633 EAL domain VS_1561 7b8c25bafdbfc36ef6082ef5fd9b58c2 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 214 1.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1561 7b8c25bafdbfc36ef6082ef5fd9b58c2 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 112 2.3E-14 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_1561 7b8c25bafdbfc36ef6082ef5fd9b58c2 222 SUPERFAMILY SSF161098 8 202 6.28E-33 T 14-10-2018 IPR035906 MetI-like superfamily VS_1561 7b8c25bafdbfc36ef6082ef5fd9b58c2 222 Gene3D G3DSA:1.10.3720.10 1 217 1.9E-42 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0754 f4cff3a67f775d031f1afd7cd1d9c108 254 Gene3D G3DSA:3.30.1360.40 8 91 1.4E-11 T 14-10-2018 VS_II0754 f4cff3a67f775d031f1afd7cd1d9c108 254 SMART SM00796 8 223 9.5E-58 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VS_II0754 f4cff3a67f775d031f1afd7cd1d9c108 254 SUPERFAMILY SSF160467 10 106 6.15E-10 T 14-10-2018 VS_II0754 f4cff3a67f775d031f1afd7cd1d9c108 254 SUPERFAMILY SSF50891 102 239 2.92E-36 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_II0754 f4cff3a67f775d031f1afd7cd1d9c108 254 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 10 209 2.8E-52 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VS_II0754 f4cff3a67f775d031f1afd7cd1d9c108 254 Gene3D G3DSA:2.40.100.10 101 246 7.6E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 179.454 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 Gene3D G3DSA:3.30.470.20 197 300 4.4E-40 T 14-10-2018 VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 Gene3D G3DSA:3.40.50.20 1 129 7.0E-52 T 14-10-2018 VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 3.6E-139 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 Gene3D G3DSA:3.30.1490.20 137 196 1.4E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 5.5E-48 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 SUPERFAMILY SSF56059 123 313 1.81E-59 T 14-10-2018 VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 SUPERFAMILY SSF52440 2 122 1.27E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_2678 2422cf77b715b85ca8ceaa564a8d81b3 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 6.2E-80 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Gene3D G3DSA:1.20.58.760 402 606 6.1E-72 T 14-10-2018 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Gene3D G3DSA:2.40.50.920 27 103 1.9E-31 T 14-10-2018 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Gene3D G3DSA:3.40.50.300 141 327 2.6E-70 T 14-10-2018 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Gene3D G3DSA:1.10.8.60 328 401 3.0E-27 T 14-10-2018 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 SMART SM00382 189 328 1.9E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 2.4E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 SUPERFAMILY SSF52540 148 396 7.96E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Pfam PF01434 Peptidase family M41 387 596 1.3E-80 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 598 5.9E-241 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 SUPERFAMILY SSF140990 407 601 7.85E-74 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Pfam PF06480 FtsH Extracellular 8 97 8.5E-13 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VS_2490 05ce7b7181b2944b8bd6c2d0cf0d97b0 659 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 624 37.122 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VS_II0181 1f5a3cef5b850224119e4074afc0a192 319 Pfam PF04018 Domain of unknown function (DUF368) 26 270 8.9E-97 T 14-10-2018 IPR007163 Protein of unknown function DUF368 VS_1636 f3d89485160c54ba623e1affd95689b9 593 SMART SM00283 330 591 6.2E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1636 f3d89485160c54ba623e1affd95689b9 593 SMART SM00304 262 315 7.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1636 f3d89485160c54ba623e1affd95689b9 593 Gene3D G3DSA:1.10.287.950 261 593 5.0E-67 T 14-10-2018 VS_1636 f3d89485160c54ba623e1affd95689b9 593 SUPERFAMILY SSF58104 283 592 1.13E-67 T 14-10-2018 VS_1636 f3d89485160c54ba623e1affd95689b9 593 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 558 3.9E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1054 59662d6d88db4be41b969a317b55d8df 342 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 42 340 4.9E-131 T 14-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT VS_II1054 59662d6d88db4be41b969a317b55d8df 342 SUPERFAMILY SSF53822 41 306 4.5E-35 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II1054 59662d6d88db4be41b969a317b55d8df 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 41 319 2.5E-31 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VS_II1054 59662d6d88db4be41b969a317b55d8df 342 Gene3D G3DSA:3.40.50.2300 43 312 1.1E-111 T 14-10-2018 VS_II1054 59662d6d88db4be41b969a317b55d8df 342 Gene3D G3DSA:3.40.50.2300 150 336 1.1E-111 T 14-10-2018 VS_II1499 cc827e2b3fcbd3a5a85cc4b11551c4b5 304 Pfam PF03466 LysR substrate binding domain 86 295 1.5E-40 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1499 cc827e2b3fcbd3a5a85cc4b11551c4b5 304 Gene3D G3DSA:3.40.190.10 90 293 4.7E-63 T 14-10-2018 VS_II1499 cc827e2b3fcbd3a5a85cc4b11551c4b5 304 Gene3D G3DSA:1.10.10.10 1 86 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1499 cc827e2b3fcbd3a5a85cc4b11551c4b5 304 SUPERFAMILY SSF46785 3 110 1.57E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1499 cc827e2b3fcbd3a5a85cc4b11551c4b5 304 SUPERFAMILY SSF53850 87 298 1.36E-40 T 14-10-2018 VS_II1499 cc827e2b3fcbd3a5a85cc4b11551c4b5 304 Gene3D G3DSA:3.40.190.10 161 262 4.7E-63 T 14-10-2018 VS_II1499 cc827e2b3fcbd3a5a85cc4b11551c4b5 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 5.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0172 25f89fecf35d191bcbce0f532359d298 309 SUPERFAMILY SSF53850 89 300 1.16E-37 T 14-10-2018 VS_II0172 25f89fecf35d191bcbce0f532359d298 309 Gene3D G3DSA:3.40.190.10 92 290 9.1E-45 T 14-10-2018 VS_II0172 25f89fecf35d191bcbce0f532359d298 309 Gene3D G3DSA:3.40.190.10 163 268 9.1E-45 T 14-10-2018 VS_II0172 25f89fecf35d191bcbce0f532359d298 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0172 25f89fecf35d191bcbce0f532359d298 309 SUPERFAMILY SSF46785 3 88 4.18E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0172 25f89fecf35d191bcbce0f532359d298 309 Gene3D G3DSA:1.10.10.10 3 91 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0172 25f89fecf35d191bcbce0f532359d298 309 Pfam PF03466 LysR substrate binding domain 88 295 1.1E-33 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.3E-23 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 SMART SM00420 6 58 2.2E-25 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 Gene3D G3DSA:3.30.750.70 70 133 8.6E-7 T 14-10-2018 VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 Gene3D G3DSA:1.10.10.10 1 67 7.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 SUPERFAMILY SSF46785 5 77 6.28E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.2E-49 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 SUPERFAMILY SSF100950 74 234 2.2E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 SMART SM01134 72 234 4.0E-65 T 14-10-2018 VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.5E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_II0114 5459cf5552eda147d868d9f9fc2faa5f 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.5E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_1528 e27754f02d7d185978868d0e9b0ca837 368 SUPERFAMILY SSF53756 22 365 1.15E-54 T 14-10-2018 VS_1528 e27754f02d7d185978868d0e9b0ca837 368 Pfam PF13579 Glycosyl transferase 4-like domain 28 191 4.1E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VS_1528 e27754f02d7d185978868d0e9b0ca837 368 Pfam PF13692 Glycosyl transferases group 1 204 319 3.2E-20 T 14-10-2018 VS_1528 e27754f02d7d185978868d0e9b0ca837 368 Gene3D G3DSA:3.40.50.2000 188 351 6.9E-43 T 14-10-2018 VS_1528 e27754f02d7d185978868d0e9b0ca837 368 Gene3D G3DSA:3.40.50.2000 28 360 6.9E-43 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 SUPERFAMILY SSF82693 565 674 2.79E-22 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 SUPERFAMILY SSF82714 725 808 7.85E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.3E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1034 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 SUPERFAMILY SSF82866 808 1036 2.35E-43 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 SUPERFAMILY SSF82693 39 132 1.6E-25 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 SUPERFAMILY SSF82714 184 273 4.84E-23 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 SUPERFAMILY SSF82693 136 332 1.66E-21 T 14-10-2018 VS_II1143 75a373157c4adb0d1d9e1dce42a29811 1050 SUPERFAMILY SSF82866 299 500 2.88E-47 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 SUPERFAMILY SSF54211 257 456 2.05E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2456 035724c651f6d3a438d40c2f70378695 459 SMART SM00382 93 246 2.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2456 035724c651f6d3a438d40c2f70378695 459 Gene3D G3DSA:3.30.230.10 328 458 1.5E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_2456 035724c651f6d3a438d40c2f70378695 459 SUPERFAMILY SSF52540 70 294 9.69E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2456 035724c651f6d3a438d40c2f70378695 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 42.926 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VS_2456 035724c651f6d3a438d40c2f70378695 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 2.4E-9 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 Pfam PF13481 AAA domain 84 224 4.1E-14 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 Gene3D G3DSA:3.40.50.300 68 281 3.9E-39 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.8E-224 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VS_2456 035724c651f6d3a438d40c2f70378695 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.7E-94 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.7E-94 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.7E-94 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.7E-94 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.7E-94 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.7E-94 T 14-10-2018 VS_2456 035724c651f6d3a438d40c2f70378695 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.7E-94 T 14-10-2018 VS_1834 377bfd6ec970aa974730adfdc0749a63 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VS_1834 377bfd6ec970aa974730adfdc0749a63 284 SUPERFAMILY SSF53697 93 280 6.88E-39 T 14-10-2018 VS_1834 377bfd6ec970aa974730adfdc0749a63 284 Pfam PF01380 SIS domain 124 252 2.1E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_1834 377bfd6ec970aa974730adfdc0749a63 284 Gene3D G3DSA:3.40.50.10490 94 276 5.5E-39 T 14-10-2018 VS_1834 377bfd6ec970aa974730adfdc0749a63 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1834 377bfd6ec970aa974730adfdc0749a63 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0050 cea4b48cf61b27e09074ae21e1b4341a 264 Gene3D G3DSA:3.40.50.12500 18 254 1.7E-68 T 14-10-2018 VS_II0050 cea4b48cf61b27e09074ae21e1b4341a 264 PIRSF PIRSF015736 5 252 1.2E-82 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 SUPERFAMILY SSF56112 301 586 2.56E-50 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 SMART SM00220 304 565 6.5E-16 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 SUPERFAMILY SSF81606 35 271 1.83E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 Pfam PF00069 Protein kinase domain 307 554 4.8E-37 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 SMART SM00332 27 269 1.9E-17 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 Gene3D G3DSA:1.10.510.10 296 585 1.1E-44 T 14-10-2018 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 Pfam PF13672 Protein phosphatase 2C 40 238 1.4E-15 T 14-10-2018 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 423 435 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 Gene3D G3DSA:3.60.40.10 18 273 5.4E-47 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VS_II1030 efe24d986579b5120b72b08d8ffb1e47 611 SMART SM00331 51 271 1.6E-6 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VS_2602 935a2fde7b2ade8968a9cce02ecbcde9 257 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 11 242 2.7E-71 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VS_2602 935a2fde7b2ade8968a9cce02ecbcde9 257 SUPERFAMILY SSF64167 11 255 1.03E-84 T 14-10-2018 VS_2602 935a2fde7b2ade8968a9cce02ecbcde9 257 Pfam PF01975 Survival protein SurE 13 191 1.7E-60 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VS_2602 935a2fde7b2ade8968a9cce02ecbcde9 257 Gene3D G3DSA:3.40.1210.10 3 257 1.2E-95 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VS_2602 935a2fde7b2ade8968a9cce02ecbcde9 257 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.959 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VS_1562 be0807c1acbf46f67dc6c4705a0795b1 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 4.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1562 be0807c1acbf46f67dc6c4705a0795b1 228 SUPERFAMILY SSF161098 10 202 5.89E-39 T 14-10-2018 IPR035906 MetI-like superfamily VS_1562 be0807c1acbf46f67dc6c4705a0795b1 228 Gene3D G3DSA:1.10.3720.10 2 217 3.6E-48 T 14-10-2018 IPR035906 MetI-like superfamily VS_1562 be0807c1acbf46f67dc6c4705a0795b1 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 1.0E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 ProSitePatterns PS00449 ATP synthase a subunit signature. 191 200 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 SUPERFAMILY SSF81336 85 248 2.75E-42 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 PRINTS PR00123 ATP synthase A subunit signature 90 106 9.2E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 PRINTS PR00123 ATP synthase A subunit signature 235 250 9.2E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 PRINTS PR00123 ATP synthase A subunit signature 188 210 9.2E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 255 15.201 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 Gene3D G3DSA:1.20.120.220 81 255 2.6E-60 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 249 8.5E-41 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0908 6f533595043a307ba15dcde45c7f24da 256 Pfam PF00119 ATP synthase A chain 32 248 2.9E-55 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_1059 808aa08a2ee6bf5c7006c4bc242e7178 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 5.2E-21 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VS_1059 808aa08a2ee6bf5c7006c4bc242e7178 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VS_1059 808aa08a2ee6bf5c7006c4bc242e7178 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.3E-103 T 14-10-2018 VS_1059 808aa08a2ee6bf5c7006c4bc242e7178 268 Gene3D G3DSA:3.60.10.10 1 268 6.7E-81 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_1059 808aa08a2ee6bf5c7006c4bc242e7178 268 SUPERFAMILY SSF56219 1 268 1.83E-88 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_1059 808aa08a2ee6bf5c7006c4bc242e7178 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 5.8E-90 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VS_1723 1e6200d91073102f1444a076c8ca392e 460 SUPERFAMILY SSF53383 117 456 1.81E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1723 1e6200d91073102f1444a076c8ca392e 460 Gene3D G3DSA:1.10.10.10 1 67 1.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1723 1e6200d91073102f1444a076c8ca392e 460 SMART SM00345 7 66 3.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1723 1e6200d91073102f1444a076c8ca392e 460 Gene3D G3DSA:3.40.640.10 134 352 4.7E-75 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1723 1e6200d91073102f1444a076c8ca392e 460 Gene3D G3DSA:3.90.1150.10 101 454 4.7E-75 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1723 1e6200d91073102f1444a076c8ca392e 460 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1723 1e6200d91073102f1444a076c8ca392e 460 SUPERFAMILY SSF46785 1 75 1.69E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1723 1e6200d91073102f1444a076c8ca392e 460 Pfam PF00155 Aminotransferase class I and II 109 438 7.7E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_II1046 85d6a25c7d373c7d7d65f0b6bd1d936b 285 SUPERFAMILY SSF52833 39 130 4.24E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II1046 85d6a25c7d373c7d7d65f0b6bd1d936b 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 243 2.7E-9 T 14-10-2018 VS_II1046 85d6a25c7d373c7d7d65f0b6bd1d936b 285 Gene3D G3DSA:3.40.30.10 18 254 1.7E-106 T 14-10-2018 VS_II1046 85d6a25c7d373c7d7d65f0b6bd1d936b 285 Gene3D G3DSA:1.20.1050.10 132 248 1.7E-106 T 14-10-2018 VS_II1046 85d6a25c7d373c7d7d65f0b6bd1d936b 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 55 126 1.8E-6 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_II1046 85d6a25c7d373c7d7d65f0b6bd1d936b 285 SUPERFAMILY SSF47616 116 258 9.69E-30 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_2153 3a3c328760c244269211ca1f55282eba 257 SUPERFAMILY SSF55658 3 47 1.78E-15 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VS_2153 3a3c328760c244269211ca1f55282eba 257 Pfam PF01693 Caulimovirus viroplasmin 4 46 1.5E-21 T 14-10-2018 IPR011320 Ribonuclease H1, N-terminal VS_2153 3a3c328760c244269211ca1f55282eba 257 SUPERFAMILY SSF53098 88 233 9.99E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2153 3a3c328760c244269211ca1f55282eba 257 Gene3D G3DSA:3.30.420.10 78 252 8.6E-40 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2153 3a3c328760c244269211ca1f55282eba 257 Gene3D G3DSA:3.40.970.10 2 52 2.7E-20 T 14-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily VS_2153 3a3c328760c244269211ca1f55282eba 257 Pfam PF00075 RNase H 89 228 2.5E-27 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VS_2153 3a3c328760c244269211ca1f55282eba 257 PIRSF PIRSF036852 1 84 1.1E-18 T 14-10-2018 IPR017067 Ribonuclease H1, eukaryote GO:0000287|GO:0004523 VS_2153 3a3c328760c244269211ca1f55282eba 257 PIRSF PIRSF036852 66 237 5.7E-29 T 14-10-2018 IPR017067 Ribonuclease H1, eukaryote GO:0000287|GO:0004523 VS_1988 4da031be466c1bb64c72ecc773812357 347 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 341 2.1E-83 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_1988 4da031be466c1bb64c72ecc773812357 347 SUPERFAMILY SSF111369 50 268 1.7E-29 T 14-10-2018 VS_1988 4da031be466c1bb64c72ecc773812357 347 Gene3D G3DSA:2.40.50.100 60 192 7.7E-70 T 14-10-2018 VS_1988 4da031be466c1bb64c72ecc773812357 347 Pfam PF13533 Biotin-lipoyl like 64 108 1.5E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_1988 4da031be466c1bb64c72ecc773812357 347 Gene3D G3DSA:2.40.30.170 46 271 7.7E-70 T 14-10-2018 VS_1988 4da031be466c1bb64c72ecc773812357 347 Pfam PF13437 HlyD family secretion protein 157 261 1.5E-9 T 14-10-2018 VS_1988 4da031be466c1bb64c72ecc773812357 347 Gene3D G3DSA:1.10.287.470 94 153 7.7E-70 T 14-10-2018 VS_1988 4da031be466c1bb64c72ecc773812357 347 Gene3D G3DSA:2.40.420.20 40 338 7.7E-70 T 14-10-2018 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SUPERFAMILY SSF47226 762 924 8.51E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SUPERFAMILY SSF47384 275 356 1.14E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Pfam PF01627 Hpt domain 841 926 1.6E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SUPERFAMILY SSF158472 200 247 3.66E-6 T 14-10-2018 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SMART SM00073 831 929 2.4E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SUPERFAMILY SSF55874 344 516 2.36E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 2.3E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 6.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SMART SM00304 198 250 5.0E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SMART SM00388 290 355 9.2E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SMART SM00387 402 518 2.4E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Pfam PF00072 Response regulator receiver domain 668 778 6.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Gene3D G3DSA:1.10.287.130 276 356 9.3E-27 T 14-10-2018 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SUPERFAMILY SSF52172 665 783 2.56E-36 T 14-10-2018 IPR011006 CheY-like superfamily VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Gene3D G3DSA:3.30.565.10 357 521 1.5E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 SMART SM00448 666 779 6.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Gene3D G3DSA:1.20.120.160 820 935 1.4E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 8.4E-55 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Gene3D G3DSA:3.40.50.2300 653 783 1.7E-38 T 14-10-2018 VS_2614 b0c14d325e3826f1e09cfb774a8781b7 937 Gene3D G3DSA:1.20.1480.50 164 270 7.9E-7 T 14-10-2018 VS_II0466 279e34567eaa64fe0c1f7c62c293582a 1005 Pfam PF05547 Immune inhibitor A peptidase M6 170 380 2.5E-11 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VS_II0466 279e34567eaa64fe0c1f7c62c293582a 1005 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 152 439 2.9E-72 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VS_II0466 279e34567eaa64fe0c1f7c62c293582a 1005 ProSitePatterns PS00018 EF-hand calcium-binding domain. 251 263 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VS_II0466 279e34567eaa64fe0c1f7c62c293582a 1005 PIRSF PIRSF036597 3 1005 0.0 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related VS_II0466 279e34567eaa64fe0c1f7c62c293582a 1005 Gene3D G3DSA:2.60.40.10 782 878 7.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0466 279e34567eaa64fe0c1f7c62c293582a 1005 SUPERFAMILY SSF55486 303 374 6.13E-7 T 14-10-2018 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 Pfam PF00672 HAMP domain 209 258 2.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 Gene3D G3DSA:1.10.287.950 207 539 2.0E-65 T 14-10-2018 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 SMART SM00304 208 262 1.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 SMART SM00283 277 538 2.0E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 5.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 5.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 5.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 SUPERFAMILY SSF58104 230 539 4.32E-71 T 14-10-2018 VS_1157 e632b048fa1a518906c5aa4c3a7eef3e 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 502 3.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.595 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.4E-125 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 Gene3D G3DSA:3.40.50.2020 7 302 5.4E-135 T 14-10-2018 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 SUPERFAMILY SSF53271 69 306 7.32E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 SMART SM01400 4 121 5.9E-77 T 14-10-2018 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 7.0E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 Gene3D G3DSA:3.40.50.2020 148 290 5.4E-135 T 14-10-2018 VS_0748 2982245a58cc2c537e60752a7e9ab78e 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 6.5E-30 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VS_2841 c4d612d9ac9fa9133cee7abfa240d2fe 241 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 2.0E-60 T 14-10-2018 IPR013559 YheO-like VS_2841 c4d612d9ac9fa9133cee7abfa240d2fe 241 Pfam PF08348 YheO-like PAS domain 31 139 1.6E-35 T 14-10-2018 IPR013559 YheO-like VS_2841 c4d612d9ac9fa9133cee7abfa240d2fe 241 Pfam PF13309 HTH domain 174 231 1.0E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VS_2206 8c120cc7a877970b7cafda922168c93a 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 411 1.5E-39 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VS_2206 8c120cc7a877970b7cafda922168c93a 432 PIRSF PIRSF003095 1 432 3.6E-127 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VS_2206 8c120cc7a877970b7cafda922168c93a 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.2E-42 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VS_2206 8c120cc7a877970b7cafda922168c93a 432 Gene3D G3DSA:1.10.3120.10 116 416 5.3E-105 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VS_2206 8c120cc7a877970b7cafda922168c93a 432 SUPERFAMILY SSF109998 248 428 2.45E-48 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VS_2206 8c120cc7a877970b7cafda922168c93a 432 Hamap MF_00303 Trigger factor [tig]. 1 417 21.612 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VS_2206 8c120cc7a877970b7cafda922168c93a 432 SUPERFAMILY SSF54534 91 241 2.36E-36 T 14-10-2018 VS_2206 8c120cc7a877970b7cafda922168c93a 432 Gene3D G3DSA:3.30.70.1050 1 115 6.2E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VS_2206 8c120cc7a877970b7cafda922168c93a 432 Gene3D G3DSA:3.10.50.40 150 246 5.3E-105 T 14-10-2018 VS_2206 8c120cc7a877970b7cafda922168c93a 432 SUPERFAMILY SSF102735 1 131 1.57E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VS_2206 8c120cc7a877970b7cafda922168c93a 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 237 1.8E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VS_2206 8c120cc7a877970b7cafda922168c93a 432 TIGRFAM TIGR00115 tig: trigger factor 11 411 2.0E-142 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VS_1194 5ca81019aa27dd4a48ad89fe2edfb6a7 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 62 9.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1194 5ca81019aa27dd4a48ad89fe2edfb6a7 294 SUPERFAMILY SSF53850 89 292 3.72E-40 T 14-10-2018 VS_1194 5ca81019aa27dd4a48ad89fe2edfb6a7 294 Gene3D G3DSA:1.10.10.10 3 89 3.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1194 5ca81019aa27dd4a48ad89fe2edfb6a7 294 Gene3D G3DSA:3.40.190.290 91 290 6.1E-58 T 14-10-2018 VS_1194 5ca81019aa27dd4a48ad89fe2edfb6a7 294 Pfam PF03466 LysR substrate binding domain 88 287 3.3E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1194 5ca81019aa27dd4a48ad89fe2edfb6a7 294 SUPERFAMILY SSF46785 6 86 1.82E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0694 99bd704cce264cb9ec328d9f13962d66 414 PIRSF PIRSF016055 1 414 3.7E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VS_0694 99bd704cce264cb9ec328d9f13962d66 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 3.1E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VS_0694 99bd704cce264cb9ec328d9f13962d66 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 6.2E-108 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VS_0694 99bd704cce264cb9ec328d9f13962d66 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.428 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VS_1628 664cd093b3e9ddf269268ed3bbd37bac 218 SUPERFAMILY SSF52833 1 100 3.15E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1628 664cd093b3e9ddf269268ed3bbd37bac 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 7.2E-20 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_1628 664cd093b3e9ddf269268ed3bbd37bac 218 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 184 1.7E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VS_1628 664cd093b3e9ddf269268ed3bbd37bac 218 Gene3D G3DSA:3.40.30.10 1 86 7.0E-28 T 14-10-2018 VS_1628 664cd093b3e9ddf269268ed3bbd37bac 218 SUPERFAMILY SSF47616 82 195 2.32E-21 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_1628 664cd093b3e9ddf269268ed3bbd37bac 218 Gene3D G3DSA:1.20.1050.10 87 205 2.8E-17 T 14-10-2018 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 SUPERFAMILY SSF81301 44 199 4.47E-40 T 14-10-2018 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 Pfam PF12626 Polymerase A arginine-rich C-terminus 346 465 2.9E-38 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VS_2530 c03f560892881eb7351dae2367cc5e4f 472 SUPERFAMILY SSF81891 200 412 1.11E-48 T 14-10-2018 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 229 290 8.3E-22 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 42 469 9.4E-163 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 28 471 37.475 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 Pfam PF01743 Poly A polymerase head domain 73 202 3.1E-37 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 Gene3D G3DSA:1.10.3090.10 200 450 4.7E-94 T 14-10-2018 VS_2530 c03f560892881eb7351dae2367cc5e4f 472 Gene3D G3DSA:3.30.460.10 39 198 1.5E-61 T 14-10-2018 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.0E-53 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 Gene3D G3DSA:3.90.1170.10 1 136 7.3E-49 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 7.7E-43 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 SUPERFAMILY SSF54686 3 133 2.22E-49 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 35.65 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 4.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 4.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 4.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2824 cf9c53b60e78bbd6a32e6ad16fce40b0 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 4.7E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2020 b90fd8ac6a41a5df1391fe800f410732 257 Pfam PF00977 Histidine biosynthesis protein 5 239 3.6E-78 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VS_2020 b90fd8ac6a41a5df1391fe800f410732 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.1E-113 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VS_2020 b90fd8ac6a41a5df1391fe800f410732 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.376 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VS_2020 b90fd8ac6a41a5df1391fe800f410732 257 Gene3D G3DSA:3.20.20.70 1 257 1.4E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2020 b90fd8ac6a41a5df1391fe800f410732 257 SUPERFAMILY SSF51366 1 256 8.63E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 SMART SM01049 72 165 8.3E-14 T 14-10-2018 IPR033480 Single Cache domain 2 VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 Gene3D G3DSA:3.30.450.20 216 332 9.4E-7 T 14-10-2018 VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 Gene3D G3DSA:3.30.70.270 388 566 4.2E-51 T 14-10-2018 VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 392 552 2.0E-40 T 14-10-2018 IPR000160 GGDEF domain VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 SUPERFAMILY SSF141868 570 816 1.24E-80 T 14-10-2018 IPR035919 EAL domain superfamily VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 548 8.3E-43 T 14-10-2018 IPR000160 GGDEF domain VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 Gene3D G3DSA:3.30.450.20 66 215 5.3E-32 T 14-10-2018 VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 Gene3D G3DSA:3.20.20.450 567 824 5.2E-87 T 14-10-2018 IPR035919 EAL domain superfamily VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 Pfam PF00563 EAL domain 571 806 1.8E-70 T 14-10-2018 IPR001633 EAL domain VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 SMART SM00267 383 555 6.2E-53 T 14-10-2018 IPR000160 GGDEF domain VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 SMART SM00052 565 811 5.4E-98 T 14-10-2018 IPR001633 EAL domain VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 Pfam PF08269 Cache domain 38 322 1.2E-73 T 14-10-2018 IPR004010 Double Cache domain 2 VS_0996 e0964389682a5b6f88d25b4f9084fcbd 827 SUPERFAMILY SSF55073 399 557 1.06E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 Gene3D G3DSA:3.10.290.10 7 76 5.9E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 SUPERFAMILY SSF55120 96 309 1.41E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 Gene3D G3DSA:3.30.2350.10 93 314 3.0E-78 T 14-10-2018 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 1.3E-91 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 Pfam PF01479 S4 domain 20 66 2.3E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 1.8E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 SUPERFAMILY SSF55174 19 71 4.37E-9 T 14-10-2018 VS_1017 624e2fb4eadf6f2e3d442408336c5071 314 SMART SM00363 20 77 3.5E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2618 885408cb71a7a805b8cee0870858ee4f 323 Pfam PF07650 KH domain 230 307 5.6E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2618 885408cb71a7a805b8cee0870858ee4f 323 Hamap MF_00367 GTPase Era [era]. 27 319 35.508 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2618 885408cb71a7a805b8cee0870858ee4f 323 Pfam PF01926 50S ribosome-binding GTPase 32 146 2.0E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_2618 885408cb71a7a805b8cee0870858ee4f 323 Gene3D G3DSA:3.30.300.20 207 321 1.9E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_2618 885408cb71a7a805b8cee0870858ee4f 323 SUPERFAMILY SSF54814 203 319 6.54E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VS_2618 885408cb71a7a805b8cee0870858ee4f 323 SUPERFAMILY SSF52540 32 227 1.72E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2618 885408cb71a7a805b8cee0870858ee4f 323 TIGRFAM TIGR00436 era: GTP-binding protein Era 30 302 2.7E-110 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2618 885408cb71a7a805b8cee0870858ee4f 323 Gene3D G3DSA:3.40.50.300 24 205 3.6E-52 T 14-10-2018 VS_2618 885408cb71a7a805b8cee0870858ee4f 323 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 29 191 3.6E-39 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 SUPERFAMILY SSF51419 27 284 2.47E-81 T 14-10-2018 IPR029066 PLP-binding barrel VS_3048 42b3f287f87dfb533cac7e66144994bd 417 SUPERFAMILY SSF50621 259 413 3.35E-52 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.3E-71 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VS_3048 42b3f287f87dfb533cac7e66144994bd 417 Gene3D G3DSA:2.40.37.10 18 404 6.3E-151 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 6.4E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 6.4E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 6.4E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.4E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.4E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 Gene3D G3DSA:3.20.20.10 35 277 6.3E-151 T 14-10-2018 IPR029066 PLP-binding barrel VS_3048 42b3f287f87dfb533cac7e66144994bd 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VS_3048 42b3f287f87dfb533cac7e66144994bd 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 1.9E-167 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 9.8E-26 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 5.1E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 5.1E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 5.1E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 5.1E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_3048 42b3f287f87dfb533cac7e66144994bd 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.593 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_0560 116fdc38bd76997c5e787c31ada62197 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 1.7E-100 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0560 116fdc38bd76997c5e787c31ada62197 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0560 116fdc38bd76997c5e787c31ada62197 324 SMART SM00363 18 83 3.0E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0560 116fdc38bd76997c5e787c31ada62197 324 SUPERFAMILY SSF55174 17 68 1.85E-9 T 14-10-2018 VS_0560 116fdc38bd76997c5e787c31ada62197 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 2.5E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0560 116fdc38bd76997c5e787c31ada62197 324 Gene3D G3DSA:3.30.2350.10 85 315 6.5E-69 T 14-10-2018 VS_0560 116fdc38bd76997c5e787c31ada62197 324 Gene3D G3DSA:3.10.290.10 2 76 8.9E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_0560 116fdc38bd76997c5e787c31ada62197 324 Pfam PF01479 S4 domain 18 64 1.6E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0560 116fdc38bd76997c5e787c31ada62197 324 SUPERFAMILY SSF55120 77 315 2.67E-76 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0014 d7e3704446b4f70390f1adbc72013ea9 144 Pfam PF00011 Hsp20/alpha crystallin family 43 137 1.4E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VS_0014 d7e3704446b4f70390f1adbc72013ea9 144 SUPERFAMILY SSF49764 6 138 4.53E-23 T 14-10-2018 IPR008978 HSP20-like chaperone VS_0014 d7e3704446b4f70390f1adbc72013ea9 144 Gene3D G3DSA:2.60.40.790 34 137 2.3E-22 T 14-10-2018 IPR008978 HSP20-like chaperone VS_II1435 09fd28540abaff4f045848be7d2423f3 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.3E-137 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VS_II1435 09fd28540abaff4f045848be7d2423f3 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.899 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VS_II1435 09fd28540abaff4f045848be7d2423f3 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VS_II1435 09fd28540abaff4f045848be7d2423f3 266 SUPERFAMILY SSF100950 1 263 4.51E-103 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_II1435 09fd28540abaff4f045848be7d2423f3 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 6.6E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VS_II1435 09fd28540abaff4f045848be7d2423f3 266 Gene3D G3DSA:3.40.50.1360 1 266 8.0E-118 T 14-10-2018 VS_2214 f1f42dd5d2d3f3fb202cb0fdf260ae1c 278 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 118 186 1.8E-12 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VS_2214 f1f42dd5d2d3f3fb202cb0fdf260ae1c 278 SUPERFAMILY SSF56214 6 106 2.75E-18 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VS_2214 f1f42dd5d2d3f3fb202cb0fdf260ae1c 278 SUPERFAMILY SSF56214 118 271 9.55E-23 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VS_2214 f1f42dd5d2d3f3fb202cb0fdf260ae1c 278 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 119 207 9.6E-18 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 553 709 2.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 Gene3D G3DSA:1.10.287.950 414 746 2.0E-66 T 14-10-2018 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 581 608 1.1E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 610 639 1.1E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 533 1.1E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 SMART SM00283 483 744 3.8E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 SMART SM00304 414 468 1.5E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1337 9efd2859dbe71334bb8c299737ee0236 746 SUPERFAMILY SSF58104 436 745 3.53E-73 T 14-10-2018 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 SUPERFAMILY SSF52374 3 283 3.26E-79 T 14-10-2018 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 Gene3D G3DSA:3.40.50.620 78 216 8.0E-104 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2529 21b59d779b59c824a3ceeeca970721e3 300 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 269 6.2E-109 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 38.774 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 2.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 2.0E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_2529 21b59d779b59c824a3ceeeca970721e3 300 Gene3D G3DSA:3.40.50.620 3 282 8.0E-104 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2529 21b59d779b59c824a3ceeeca970721e3 300 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 256 1.5E-40 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VS_0576 3807cfc504f9fa3b9c1652e21f1f3d80 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_0576 3807cfc504f9fa3b9c1652e21f1f3d80 84 SUPERFAMILY SSF54862 4 66 4.93E-17 T 14-10-2018 VS_0576 3807cfc504f9fa3b9c1652e21f1f3d80 84 Gene3D G3DSA:3.30.70.20 2 83 9.1E-34 T 14-10-2018 VS_0576 3807cfc504f9fa3b9c1652e21f1f3d80 84 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_II0035 5ae95e7980c2546fb1998721259161a7 424 SUPERFAMILY SSF51419 52 284 7.85E-31 T 14-10-2018 IPR029066 PLP-binding barrel VS_II0035 5ae95e7980c2546fb1998721259161a7 424 Gene3D G3DSA:3.20.20.10 55 285 7.6E-133 T 14-10-2018 IPR029066 PLP-binding barrel VS_II0035 5ae95e7980c2546fb1998721259161a7 424 Pfam PF14031 Putative serine dehydratase domain 315 408 7.2E-15 T 14-10-2018 IPR026956 D-serine dehydratase-like domain VS_II0035 5ae95e7980c2546fb1998721259161a7 424 Gene3D G3DSA:2.40.37.20 39 424 7.6E-133 T 14-10-2018 VS_II0035 5ae95e7980c2546fb1998721259161a7 424 Pfam PF01168 Alanine racemase, N-terminal domain 52 256 8.9E-15 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_II0035 5ae95e7980c2546fb1998721259161a7 424 SMART SM01119 315 411 2.0E-29 T 14-10-2018 IPR026956 D-serine dehydratase-like domain VS_1931 79ab7cd4f82e8d3aad2e6658c0da13d7 228 Gene3D G3DSA:3.30.70.20 33 227 5.4E-58 T 14-10-2018 VS_1931 79ab7cd4f82e8d3aad2e6658c0da13d7 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_1931 79ab7cd4f82e8d3aad2e6658c0da13d7 228 Pfam PF13247 4Fe-4S dicluster domain 91 188 1.1E-25 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_1931 79ab7cd4f82e8d3aad2e6658c0da13d7 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 228 7.3E-130 T 14-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VS_1931 79ab7cd4f82e8d3aad2e6658c0da13d7 228 SUPERFAMILY SSF54862 42 224 7.33E-64 T 14-10-2018 VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 Pfam PF03466 LysR substrate binding domain 94 288 7.4E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 Gene3D G3DSA:1.10.10.10 7 92 7.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 Gene3D G3DSA:3.40.190.10 103 287 2.7E-43 T 14-10-2018 VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 Gene3D G3DSA:3.40.190.10 162 261 2.7E-43 T 14-10-2018 VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 SUPERFAMILY SSF46785 8 80 1.04E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2185 808a96ea8ddb5e14438d825e1f84b12c 290 SUPERFAMILY SSF53850 92 289 1.23E-30 T 14-10-2018 VS_II0682 2ee864e0f504665192afb4f041967319 206 SUPERFAMILY SSF74653 118 196 1.7E-25 T 14-10-2018 VS_II0682 2ee864e0f504665192afb4f041967319 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 1.8E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal VS_II0682 2ee864e0f504665192afb4f041967319 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 8.0E-15 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VS_II0682 2ee864e0f504665192afb4f041967319 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 64 74 8.0E-15 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VS_II0682 2ee864e0f504665192afb4f041967319 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 8.0E-15 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VS_II0682 2ee864e0f504665192afb4f041967319 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 8.0E-15 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VS_II0682 2ee864e0f504665192afb4f041967319 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 1.3E-20 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VS_II0682 2ee864e0f504665192afb4f041967319 206 Gene3D G3DSA:3.30.1150.10 103 206 2.4E-30 T 14-10-2018 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SMART SM00448 725 845 2.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SMART SM00448 876 994 1.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Gene3D G3DSA:1.20.120.160 1034 1135 3.7E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Gene3D G3DSA:1.10.287.130 451 542 2.2E-28 T 14-10-2018 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Pfam PF00072 Response regulator receiver domain 878 992 1.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Pfam PF00072 Response regulator receiver domain 727 844 9.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SMART SM00388 479 544 1.1E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Gene3D G3DSA:3.40.50.2300 713 851 1.1E-20 T 14-10-2018 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SUPERFAMILY SSF55874 533 704 9.43E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SUPERFAMILY SSF52172 723 851 5.83E-21 T 14-10-2018 IPR011006 CheY-like superfamily VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Pfam PF00512 His Kinase A (phospho-acceptor) domain 479 544 1.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Gene3D G3DSA:3.30.565.10 543 711 1.3E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 703 6.0E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SUPERFAMILY SSF47226 977 1125 2.22E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SUPERFAMILY SSF52172 873 999 9.68E-36 T 14-10-2018 IPR011006 CheY-like superfamily VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SUPERFAMILY SSF47384 463 545 5.89E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 704 4.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 660 4.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 685 4.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 646 4.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Pfam PF01627 Hpt domain 1078 1106 4.0E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 SMART SM00387 591 707 2.1E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1315 d93a3fb5a3b75399485c5da282c8351b 1223 Gene3D G3DSA:3.40.50.2300 856 997 1.0E-39 T 14-10-2018 VS_0419 d1c82a0516cff80d7e0b23924d095d91 209 Gene3D G3DSA:3.90.79.10 1 208 9.3E-63 T 14-10-2018 VS_0419 d1c82a0516cff80d7e0b23924d095d91 209 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_0419 d1c82a0516cff80d7e0b23924d095d91 209 Pfam PF00293 NUDIX domain 59 175 7.1E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_0419 d1c82a0516cff80d7e0b23924d095d91 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 2.2E-57 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 VS_0419 d1c82a0516cff80d7e0b23924d095d91 209 SUPERFAMILY SSF55811 3 207 1.31E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_2686 54ea5aaa6928f0d2340807bfc0a84b71 96 SUPERFAMILY SSF69786 3 96 7.72E-33 T 14-10-2018 IPR036591 YggU-like superfamily VS_2686 54ea5aaa6928f0d2340807bfc0a84b71 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.679 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VS_2686 54ea5aaa6928f0d2340807bfc0a84b71 96 SMART SM01152 8 84 3.1E-39 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VS_2686 54ea5aaa6928f0d2340807bfc0a84b71 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 2.6E-27 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 VS_2686 54ea5aaa6928f0d2340807bfc0a84b71 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 2.8E-26 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VS_2686 54ea5aaa6928f0d2340807bfc0a84b71 96 Gene3D G3DSA:3.30.1200.10 1 96 1.1E-35 T 14-10-2018 IPR036591 YggU-like superfamily VS_1272 ab78cd5db32471bcb51c219afc87b4ae 158 SUPERFAMILY SSF81301 1 155 1.05E-38 T 14-10-2018 VS_1272 ab78cd5db32471bcb51c219afc87b4ae 158 Gene3D G3DSA:3.30.460.40 1 155 1.8E-28 T 14-10-2018 VS_2429 f70899970307f45f60d0792f8a37b11c 308 SUPERFAMILY SSF46785 7 85 5.45E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2429 f70899970307f45f60d0792f8a37b11c 308 Gene3D G3DSA:3.40.190.10 174 273 9.8E-42 T 14-10-2018 VS_2429 f70899970307f45f60d0792f8a37b11c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2429 f70899970307f45f60d0792f8a37b11c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2429 f70899970307f45f60d0792f8a37b11c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2429 f70899970307f45f60d0792f8a37b11c 308 Pfam PF03466 LysR substrate binding domain 99 301 3.9E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2429 f70899970307f45f60d0792f8a37b11c 308 SUPERFAMILY SSF53850 93 299 3.8E-30 T 14-10-2018 VS_2429 f70899970307f45f60d0792f8a37b11c 308 Gene3D G3DSA:3.40.190.10 93 297 9.8E-42 T 14-10-2018 VS_2429 f70899970307f45f60d0792f8a37b11c 308 Gene3D G3DSA:1.10.10.10 4 89 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2429 f70899970307f45f60d0792f8a37b11c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 SUPERFAMILY SSF52172 4 121 1.71E-17 T 14-10-2018 IPR011006 CheY-like superfamily VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 SUPERFAMILY SSF55073 260 405 5.73E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 2.0E-29 T 14-10-2018 IPR000160 GGDEF domain VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 Gene3D G3DSA:3.40.50.2300 119 254 3.0E-30 T 14-10-2018 VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 Gene3D G3DSA:3.30.70.270 255 412 2.7E-38 T 14-10-2018 VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 SMART SM00448 124 238 5.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 SMART SM00448 3 115 4.5E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 SUPERFAMILY SSF52172 125 284 4.13E-31 T 14-10-2018 IPR011006 CheY-like superfamily VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 403 1.9E-35 T 14-10-2018 IPR000160 GGDEF domain VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 Gene3D G3DSA:3.40.50.2300 1 118 1.5E-15 T 14-10-2018 VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 SMART SM00267 244 404 2.7E-40 T 14-10-2018 IPR000160 GGDEF domain VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 Pfam PF00072 Response regulator receiver domain 5 104 1.1E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0701 6bc81abef059d50b023ccd4eb83e5cb0 412 Pfam PF00072 Response regulator receiver domain 127 235 2.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0126 eb25f98542a00f9ed3d9308f141dced3 324 SUPERFAMILY SSF51735 2 151 1.67E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0126 eb25f98542a00f9ed3d9308f141dced3 324 SUPERFAMILY SSF55347 125 293 6.05E-22 T 14-10-2018 VS_II0126 eb25f98542a00f9ed3d9308f141dced3 324 Gene3D G3DSA:3.40.50.720 1 122 4.1E-30 T 14-10-2018 VS_II0126 eb25f98542a00f9ed3d9308f141dced3 324 Gene3D G3DSA:3.30.360.10 123 324 5.1E-28 T 14-10-2018 VS_II0126 eb25f98542a00f9ed3d9308f141dced3 324 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 2.6E-16 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 SMART SM00487 196 395 1.2E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 Pfam PF00271 Helicase conserved C-terminal domain 513 588 2.8E-7 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 SMART SM00490 492 589 1.5E-11 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 SUPERFAMILY SSF52540 460 614 3.16E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 1.7E-190 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 Gene3D G3DSA:3.40.50.300 187 379 6.8E-77 T 14-10-2018 VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 Pfam PF00270 DEAD/DEAH box helicase 204 362 1.1E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 Gene3D G3DSA:1.10.8.630 4 113 5.4E-35 T 14-10-2018 VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 SUPERFAMILY SSF52540 163 378 6.39E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2898 1bc69cf16317c295b18ecc8534e8dcf6 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 24.97 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 Gene3D G3DSA:1.10.3660.10 248 373 2.2E-48 T 14-10-2018 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 Pfam PF01817 Chorismate mutase type II 9 87 1.6E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 SUPERFAMILY SSF48600 4 88 2.75E-24 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 PIRSF PIRSF001499 1 374 2.4E-179 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 SMART SM00830 9 89 5.2E-29 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 SUPERFAMILY SSF51735 91 240 3.74E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0548 93bef7136c44fa73533b5748aa877eaa 375 SUPERFAMILY SSF48179 241 366 1.81E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 Gene3D G3DSA:1.20.59.10 1 80 8.3E-18 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.0E-41 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 Gene3D G3DSA:3.40.50.720 81 247 3.7E-43 T 14-10-2018 VS_0548 93bef7136c44fa73533b5748aa877eaa 375 Pfam PF02153 Prephenate dehydrogenase 138 344 1.1E-28 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 PRINTS PR00502 NUDIX hydrolase family signature 173 188 7.4E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 PRINTS PR00502 NUDIX hydrolase family signature 159 173 7.4E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 Gene3D G3DSA:3.90.79.20 3 130 3.5E-33 T 14-10-2018 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 262 40.579 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 Pfam PF00293 NUDIX domain 137 238 2.4E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 Gene3D G3DSA:3.90.79.10 131 261 1.3E-40 T 14-10-2018 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 99 129 9.9E-10 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_2960 9cf4f69bc0738221824bd2d0ac070088 269 SUPERFAMILY SSF55811 66 247 1.23E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_II0549 8d2ce67b643b57e45b696463ac8f3c81 194 Pfam PF13590 Domain of unknown function (DUF4136) 50 192 1.6E-10 T 14-10-2018 IPR025411 Domain of unknown function DUF4136 VS_II0549 8d2ce67b643b57e45b696463ac8f3c81 194 Gene3D G3DSA:3.30.160.670 26 193 2.6E-5 T 14-10-2018 VS_0287 2f231acfcb5786d039c9cfa93de258d7 141 Gene3D G3DSA:2.60.120.460 2 139 1.2E-43 T 14-10-2018 IPR035917 YjbQ-like superfamily VS_0287 2f231acfcb5786d039c9cfa93de258d7 141 SUPERFAMILY SSF111038 1 139 1.44E-50 T 14-10-2018 IPR035917 YjbQ-like superfamily VS_0287 2f231acfcb5786d039c9cfa93de258d7 141 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VS_0287 2f231acfcb5786d039c9cfa93de258d7 141 PIRSF PIRSF004681 1 139 9.5E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VS_0287 2f231acfcb5786d039c9cfa93de258d7 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 7 139 7.3E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VS_0287 2f231acfcb5786d039c9cfa93de258d7 141 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 6.1E-40 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 Pfam PF08264 Anticodon-binding domain of tRNA 700 856 7.0E-27 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 655 8.9E-216 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 Gene3D G3DSA:3.40.50.620 25 644 2.1E-239 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 Gene3D G3DSA:3.90.740.10 195 416 2.1E-239 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 943 21.425 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 SUPERFAMILY SSF50677 204 411 5.86E-52 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 Gene3D G3DSA:1.10.730.20 655 943 2.6E-88 T 14-10-2018 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.4E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 409 424 5.4E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 535 548 5.4E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 576 585 5.4E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.4E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 858 1.0E-293 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 SUPERFAMILY SSF47323 667 943 4.11E-76 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 Pfam PF06827 Zinc finger found in FPG and IleRS 913 940 2.0E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VS_0536 62fa4bcb58c05ec48a84c98e9fc74b4b 952 SUPERFAMILY SSF52374 3 662 4.02E-139 T 14-10-2018 VS_II0292 80a586e32c206abbb2c457048c2c085e 176 Gene3D G3DSA:2.30.110.10 12 176 6.0E-56 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VS_II0292 80a586e32c206abbb2c457048c2c085e 176 SUPERFAMILY SSF50475 12 162 1.23E-34 T 14-10-2018 VS_II0292 80a586e32c206abbb2c457048c2c085e 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 1.9E-92 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VS_II0292 80a586e32c206abbb2c457048c2c085e 176 PIRSF PIRSF004633 1 176 4.4E-79 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VS_II0292 80a586e32c206abbb2c457048c2c085e 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 2.0E-18 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VS_1345 08c388732327a14e592bda1a764f3ca2 878 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 42 875 1.7E-290 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 VS_1345 08c388732327a14e592bda1a764f3ca2 878 Gene3D G3DSA:1.10.1440.20 581 637 4.5E-9 T 14-10-2018 VS_1345 08c388732327a14e592bda1a764f3ca2 878 Gene3D G3DSA:3.30.499.20 20 372 6.0E-130 T 14-10-2018 VS_1345 08c388732327a14e592bda1a764f3ca2 878 Pfam PF00330 Aconitase family (aconitate hydratase) 82 552 1.3E-147 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 15 877 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VS_1345 08c388732327a14e592bda1a764f3ca2 878 SUPERFAMILY SSF52016 617 875 6.47E-66 T 14-10-2018 VS_1345 08c388732327a14e592bda1a764f3ca2 878 Gene3D G3DSA:3.20.19.10 638 876 1.8E-81 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 217 232 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 483 496 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 279 292 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 372 386 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 174 182 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 203 216 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 150 163 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 421 432 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 PRINTS PR00415 Aconitase family signature 293 306 9.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 Gene3D G3DSA:3.30.499.10 373 580 2.6E-78 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 SUPERFAMILY SSF53732 36 609 3.79E-185 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VS_1345 08c388732327a14e592bda1a764f3ca2 878 Pfam PF00694 Aconitase C-terminal domain 675 805 2.3E-29 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 Gene3D G3DSA:3.30.70.920 55 137 6.1E-18 T 14-10-2018 VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 SMART SM00344 1 110 1.8E-34 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 SUPERFAMILY SSF46785 1 60 9.98E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 SUPERFAMILY SSF54909 63 145 5.5E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.8E-16 T 14-10-2018 VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 2.7E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_II0171 288f8bfdb6c1c80a7e776c3de908893e 146 Gene3D G3DSA:1.10.10.10 1 54 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0624 4f65dc224c0895e3402795c6e57ce49d 300 SUPERFAMILY SSF55186 132 282 3.27E-13 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VS_2541 74f495256632148dae0dabfcbf74c921 624 SUPERFAMILY SSF47005 311 356 2.22E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 SUPERFAMILY SSF51230 103 193 4.45E-21 T 14-10-2018 IPR011053 Single hybrid motif VS_2541 74f495256632148dae0dabfcbf74c921 624 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 Gene3D G3DSA:2.40.50.100 201 279 2.7E-19 T 14-10-2018 VS_2541 74f495256632148dae0dabfcbf74c921 624 Gene3D G3DSA:2.40.50.100 103 180 3.0E-19 T 14-10-2018 VS_2541 74f495256632148dae0dabfcbf74c921 624 Gene3D G3DSA:2.40.50.100 1 80 1.8E-21 T 14-10-2018 VS_2541 74f495256632148dae0dabfcbf74c921 624 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 393 623 3.1E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 Pfam PF02817 e3 binding domain 318 352 8.8E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 224 253 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 SUPERFAMILY SSF51230 1 91 5.37E-23 T 14-10-2018 IPR011053 Single hybrid motif VS_2541 74f495256632148dae0dabfcbf74c921 624 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 126 155 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 Gene3D G3DSA:4.10.320.10 317 362 4.9E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 SUPERFAMILY SSF52777 382 623 2.58E-80 T 14-10-2018 VS_2541 74f495256632148dae0dabfcbf74c921 624 Gene3D G3DSA:3.30.559.10 377 624 4.1E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VS_2541 74f495256632148dae0dabfcbf74c921 624 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 186 624 1.7E-201 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VS_2541 74f495256632148dae0dabfcbf74c921 624 SUPERFAMILY SSF51230 202 293 4.97E-22 T 14-10-2018 IPR011053 Single hybrid motif VS_2541 74f495256632148dae0dabfcbf74c921 624 Pfam PF00364 Biotin-requiring enzyme 104 174 2.3E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VS_2541 74f495256632148dae0dabfcbf74c921 624 Pfam PF00364 Biotin-requiring enzyme 4 73 5.3E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VS_2541 74f495256632148dae0dabfcbf74c921 624 Pfam PF00364 Biotin-requiring enzyme 202 272 5.2E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 2.1E-13 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 SUPERFAMILY SSF51735 1 113 7.88E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 Pfam PF13241 Putative NAD(P)-binding 6 116 3.2E-28 T 14-10-2018 VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 Gene3D G3DSA:3.40.50.720 1 113 7.7E-34 T 14-10-2018 VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 Gene3D G3DSA:1.10.8.210 150 211 8.8E-11 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 Pfam PF14824 Sirohaem biosynthesis protein central 120 145 6.6E-9 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 Gene3D G3DSA:3.30.160.110 114 149 7.0E-15 T 14-10-2018 VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 SUPERFAMILY SSF75615 115 201 7.85E-25 T 14-10-2018 VS_1404 35e88b7abfd2697f8716824abe2adeb0 313 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 198 6.8E-60 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_0368 c0ca2b6c4b3eda9706650040e4f952dc 267 Pfam PF00149 Calcineurin-like phosphoesterase 5 161 5.8E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VS_0368 c0ca2b6c4b3eda9706650040e4f952dc 267 SUPERFAMILY SSF56300 4 252 1.09E-55 T 14-10-2018 VS_0368 c0ca2b6c4b3eda9706650040e4f952dc 267 PIRSF PIRSF000903 1 267 1.7E-119 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VS_0368 c0ca2b6c4b3eda9706650040e4f952dc 267 Gene3D G3DSA:3.60.21.10 2 267 1.4E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_0368 c0ca2b6c4b3eda9706650040e4f952dc 267 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 2.0E-113 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VS_0368 c0ca2b6c4b3eda9706650040e4f952dc 267 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 267 46.663 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VS_0389 00f76b904fa03c254d41d02f36006d35 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.6E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VS_0389 00f76b904fa03c254d41d02f36006d35 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.8E-61 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VS_0389 00f76b904fa03c254d41d02f36006d35 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 5.0E-34 T 14-10-2018 VS_0389 00f76b904fa03c254d41d02f36006d35 164 Gene3D G3DSA:3.30.70.260 1 78 6.4E-32 T 14-10-2018 VS_0389 00f76b904fa03c254d41d02f36006d35 164 SUPERFAMILY SSF55021 1 75 3.31E-22 T 14-10-2018 VS_0389 00f76b904fa03c254d41d02f36006d35 164 SUPERFAMILY SSF55021 79 162 1.89E-26 T 14-10-2018 VS_0389 00f76b904fa03c254d41d02f36006d35 164 Pfam PF13710 ACT domain 11 73 1.0E-17 T 14-10-2018 VS_0389 00f76b904fa03c254d41d02f36006d35 164 Gene3D G3DSA:3.30.70.1150 80 157 1.2E-27 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VS_0438 560bf5d1d82c741d5306bf65b885d021 143 Gene3D G3DSA:3.40.1350.10 34 143 6.2E-28 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VS_0438 560bf5d1d82c741d5306bf65b885d021 143 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 27 141 3.6E-33 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VS_0438 560bf5d1d82c741d5306bf65b885d021 143 SUPERFAMILY SSF52980 28 129 1.61E-18 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VS_0438 560bf5d1d82c741d5306bf65b885d021 143 Hamap MF_00048 UPF0102 protein YraN [yraN]. 27 139 21.684 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VS_0438 560bf5d1d82c741d5306bf65b885d021 143 Pfam PF02021 Uncharacterised protein family UPF0102 34 126 2.7E-25 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VS_1475 a37c7ff4267a22ca3d89a317d4410e63 285 Gene3D G3DSA:1.10.3720.10 6 277 3.8E-54 T 14-10-2018 IPR035906 MetI-like superfamily VS_1475 a37c7ff4267a22ca3d89a317d4410e63 285 SUPERFAMILY SSF161098 9 274 2.35E-53 T 14-10-2018 IPR035906 MetI-like superfamily VS_1475 a37c7ff4267a22ca3d89a317d4410e63 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 1.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2891 1d2e6898fc3bb88f6893ac7b6e3eb5fa 179 Gene3D G3DSA:1.10.10.10 1 89 2.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2891 1d2e6898fc3bb88f6893ac7b6e3eb5fa 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 3.7E-14 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal VS_2891 1d2e6898fc3bb88f6893ac7b6e3eb5fa 179 Pfam PF10400 Virulence activator alpha C-term 92 175 3.0E-13 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal VS_2891 1d2e6898fc3bb88f6893ac7b6e3eb5fa 179 SUPERFAMILY SSF46785 3 176 1.25E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1501 0477a067e3619d2958bebaa6b6f99b3a 239 Pfam PF00005 ABC transporter 25 165 4.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1501 0477a067e3619d2958bebaa6b6f99b3a 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1501 0477a067e3619d2958bebaa6b6f99b3a 239 SMART SM00382 29 213 2.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1501 0477a067e3619d2958bebaa6b6f99b3a 239 SUPERFAMILY SSF52540 5 217 2.11E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1501 0477a067e3619d2958bebaa6b6f99b3a 239 Gene3D G3DSA:3.40.50.300 1 239 3.7E-52 T 14-10-2018 VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SUPERFAMILY SSF55785 475 599 5.53E-20 T 14-10-2018 IPR035965 PAS domain superfamily VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 608 771 1.9E-33 T 14-10-2018 IPR000160 GGDEF domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Gene3D G3DSA:3.30.70.270 601 773 7.9E-45 T 14-10-2018 VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SMART SM00052 785 1032 3.1E-59 T 14-10-2018 IPR001633 EAL domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Gene3D G3DSA:3.20.20.450 774 1034 2.5E-75 T 14-10-2018 IPR035919 EAL domain superfamily VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 488 608 1.1E-14 T 14-10-2018 IPR000014 PAS domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 363 485 2.5E-6 T 14-10-2018 IPR000014 PAS domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SUPERFAMILY SSF141868 791 1039 1.03E-69 T 14-10-2018 IPR035919 EAL domain superfamily VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Gene3D G3DSA:3.30.450.20 352 480 6.8E-10 T 14-10-2018 VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SMART SM00086 436 478 31.0 T 14-10-2018 IPR001610 PAC motif VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SMART SM00086 563 601 0.16 T 14-10-2018 IPR001610 PAC motif VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SUPERFAMILY SSF55785 353 476 4.94E-8 T 14-10-2018 IPR035965 PAS domain superfamily VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Pfam PF00990 Diguanylate cyclase, GGDEF domain 612 769 3.7E-33 T 14-10-2018 IPR000160 GGDEF domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Pfam PF13426 PAS domain 501 600 2.4E-9 T 14-10-2018 IPR000014 PAS domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Pfam PF13426 PAS domain 388 476 0.98 T 14-10-2018 IPR000014 PAS domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Gene3D G3DSA:3.30.450.20 481 599 3.3E-18 T 14-10-2018 VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SMART SM00091 490 555 0.039 T 14-10-2018 IPR000014 PAS domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SMART SM00091 366 431 10.0 T 14-10-2018 IPR000014 PAS domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SMART SM00267 601 773 1.2E-45 T 14-10-2018 IPR000160 GGDEF domain VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 SUPERFAMILY SSF55073 617 773 2.51E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VS_0086 bcaee66865ea1eaf0aefbc73cb72fc4c 1044 Pfam PF00563 EAL domain 793 1027 2.0E-55 T 14-10-2018 IPR001633 EAL domain VS_1492 a9e1a0fe2d623ab13d31bf14b0280be6 273 PIRSF PIRSF015626 1 271 4.5E-98 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VS_1492 a9e1a0fe2d623ab13d31bf14b0280be6 273 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 31 267 1.3E-42 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VS_1492 a9e1a0fe2d623ab13d31bf14b0280be6 273 Gene3D G3DSA:3.10.20.10 36 119 3.4E-10 T 14-10-2018 VS_1492 a9e1a0fe2d623ab13d31bf14b0280be6 273 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 26.398 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VS_1492 a9e1a0fe2d623ab13d31bf14b0280be6 273 Pfam PF02634 FdhD/NarQ family 35 266 3.8E-75 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VS_1492 a9e1a0fe2d623ab13d31bf14b0280be6 273 Gene3D G3DSA:3.40.140.10 121 271 3.3E-43 T 14-10-2018 VS_1492 a9e1a0fe2d623ab13d31bf14b0280be6 273 SUPERFAMILY SSF53927 15 266 1.83E-71 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_0545 6d5b49dd2fc2abeefecc30d404aed923 378 Gene3D G3DSA:3.30.420.40 19 372 4.8E-132 T 14-10-2018 VS_0545 6d5b49dd2fc2abeefecc30d404aed923 378 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 13 376 3.5E-164 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VS_0545 6d5b49dd2fc2abeefecc30d404aed923 378 Gene3D G3DSA:3.30.420.40 153 337 4.8E-132 T 14-10-2018 VS_0545 6d5b49dd2fc2abeefecc30d404aed923 378 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 12 377 41.088 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VS_0545 6d5b49dd2fc2abeefecc30d404aed923 378 SUPERFAMILY SSF53067 13 351 2.72E-28 T 14-10-2018 VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 SMART SM00244 87 250 1.3E-48 T 14-10-2018 IPR001107 Band 7 domain VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 SUPERFAMILY SSF117892 140 255 4.45E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 Gene3D G3DSA:3.30.479.30 127 241 1.3E-22 T 14-10-2018 VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 Pfam PF12221 Bacterial membrane protein N terminal 1 56 2.1E-12 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 Pfam PF01145 SPFH domain / Band 7 family 91 265 3.7E-27 T 14-10-2018 IPR001107 Band 7 domain VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 PRINTS PR00721 Stomatin signature 144 165 9.4E-8 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 PRINTS PR00721 Stomatin signature 94 116 9.4E-8 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 PRINTS PR00721 Stomatin signature 200 223 9.4E-8 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_0272 7ad59b1eac2d3c6979610d4d0ef5e262 400 TIGRFAM TIGR01933 hflK: HflK protein 89 352 1.8E-115 T 14-10-2018 IPR010201 HflK GO:0016021 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 SMART SM00387 317 429 9.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 SMART SM00091 98 166 1.3E-5 T 14-10-2018 IPR000014 PAS domain VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 Gene3D G3DSA:3.30.450.20 85 200 8.9E-9 T 14-10-2018 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 5.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 2.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 SUPERFAMILY SSF55874 261 427 2.23E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 Gene3D G3DSA:3.30.565.10 278 430 5.6E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 Pfam PF00989 PAS fold 99 153 3.3E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 SMART SM00388 205 272 5.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 2.0E-31 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 9.4E-139 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 Gene3D G3DSA:1.10.287.130 201 275 1.0E-20 T 14-10-2018 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 SUPERFAMILY SSF47384 192 271 1.96E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0580 a4e4572b61ce41bb45d860b3499cf94d 432 SUPERFAMILY SSF55785 86 197 3.49E-10 T 14-10-2018 IPR035965 PAS domain superfamily VS_2959 f3181c9ed8badcbb31b5e2e148ca843f 373 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 160 176 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VS_2959 f3181c9ed8badcbb31b5e2e148ca843f 373 SUPERFAMILY SSF51726 19 372 1.57E-121 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_2959 f3181c9ed8badcbb31b5e2e148ca843f 373 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 24 368 50.222 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VS_2959 f3181c9ed8badcbb31b5e2e148ca843f 373 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 23 366 1.9E-140 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VS_2959 f3181c9ed8badcbb31b5e2e148ca843f 373 Gene3D G3DSA:3.20.20.210 19 373 2.0E-158 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_2959 f3181c9ed8badcbb31b5e2e148ca843f 373 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 40 49 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VS_2959 f3181c9ed8badcbb31b5e2e148ca843f 373 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 27 365 2.8E-138 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 225 9.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 SMART SM00448 2 111 6.3E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 SUPERFAMILY SSF46894 125 226 9.64E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 Gene3D G3DSA:1.10.10.10 129 229 1.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 Gene3D G3DSA:3.40.50.2300 1 128 6.6E-37 T 14-10-2018 VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 SMART SM00862 149 225 2.9E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 Pfam PF00072 Response regulator receiver domain 4 112 2.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2916 b7fafb1261c793fceca0a16a73ae9f42 229 SUPERFAMILY SSF52172 1 125 8.4E-39 T 14-10-2018 IPR011006 CheY-like superfamily VS_0266 fddcb09bd8cd4cc12932d19edd96f7c2 182 Gene3D G3DSA:3.40.50.300 29 181 1.8E-49 T 14-10-2018 VS_0266 fddcb09bd8cd4cc12932d19edd96f7c2 182 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 37 161 4.2E-42 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VS_0266 fddcb09bd8cd4cc12932d19edd96f7c2 182 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 36 167 4.7E-52 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VS_0266 fddcb09bd8cd4cc12932d19edd96f7c2 182 SUPERFAMILY SSF52540 54 179 2.02E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0351 f5f193771fe515593581d75faebcb11f 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 8.8E-42 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VS_II0351 f5f193771fe515593581d75faebcb11f 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 1.0E-43 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VS_II0351 f5f193771fe515593581d75faebcb11f 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.126 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VS_II0351 f5f193771fe515593581d75faebcb11f 104 PIRSF PIRSF028773 1 104 6.8E-46 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Pfam PF04542 Sigma-70 region 2 380 449 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Pfam PF04545 Sigma-70, region 4 548 601 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 SUPERFAMILY SSF88659 510 612 1.91E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_0397 8b9320ad0f504f38ae1169da94984283 614 Pfam PF04546 Sigma-70, non-essential region 139 349 1.7E-63 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Gene3D G3DSA:1.10.10.10 530 614 7.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0397 8b9320ad0f504f38ae1169da94984283 614 Pfam PF04539 Sigma-70 region 3 459 534 1.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 SUPERFAMILY SSF88946 115 447 3.7E-93 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Gene3D G3DSA:1.10.601.10 113 449 5.4E-137 T 14-10-2018 VS_0397 8b9320ad0f504f38ae1169da94984283 614 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 573 599 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 PRINTS PR00046 Major sigma-70 factor signature 404 417 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 PRINTS PR00046 Major sigma-70 factor signature 428 436 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 PRINTS PR00046 Major sigma-70 factor signature 552 564 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 PRINTS PR00046 Major sigma-70 factor signature 573 588 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 PRINTS PR00046 Major sigma-70 factor signature 588 599 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 404 417 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Gene3D G3DSA:1.10.10.10 453 529 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0397 8b9320ad0f504f38ae1169da94984283 614 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 376 601 1.5E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 613 45.739 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VS_0397 8b9320ad0f504f38ae1169da94984283 614 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 376 612 2.0E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 5.6E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Gene3D G3DSA:1.10.220.120 1 64 2.5E-29 T 14-10-2018 VS_0397 8b9320ad0f504f38ae1169da94984283 614 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 2.1E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_0397 8b9320ad0f504f38ae1169da94984283 614 SUPERFAMILY SSF88659 453 526 2.2E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_2943 6960abb389169d46a3dff8f058454ceb 165 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 22 161 4.3E-65 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VS_2943 6960abb389169d46a3dff8f058454ceb 165 Gene3D G3DSA:3.40.50.9100 14 165 3.3E-67 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VS_2943 6960abb389169d46a3dff8f058454ceb 165 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 37 153 6.0E-55 T 14-10-2018 VS_2943 6960abb389169d46a3dff8f058454ceb 165 ProSitePatterns PS01029 Dehydroquinase class II signature. 26 43 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VS_2943 6960abb389169d46a3dff8f058454ceb 165 PIRSF PIRSF001399 19 165 2.6E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VS_2943 6960abb389169d46a3dff8f058454ceb 165 SUPERFAMILY SSF52304 17 162 1.96E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VS_2943 6960abb389169d46a3dff8f058454ceb 165 Pfam PF01220 Dehydroquinase class II 22 158 5.4E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VS_2943 6960abb389169d46a3dff8f058454ceb 165 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 165 76.567 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VS_1282 7006f3138d738ce8b5449111c148f22f 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 8.8E-38 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VS_1282 7006f3138d738ce8b5449111c148f22f 342 PIRSF PIRSF005632 1 342 2.7E-195 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VS_1282 7006f3138d738ce8b5449111c148f22f 342 SUPERFAMILY SSF51726 3 339 3.01E-69 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_1282 7006f3138d738ce8b5449111c148f22f 342 Gene3D G3DSA:3.20.20.210 1 342 7.0E-137 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VS_2402 3116b702b5792a5c6a52fde2ff5f1b5b 315 SUPERFAMILY SSF103088 182 299 2.09E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_2402 3116b702b5792a5c6a52fde2ff5f1b5b 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 57 8.1E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain VS_2402 3116b702b5792a5c6a52fde2ff5f1b5b 315 Gene3D G3DSA:3.30.1330.60 153 301 1.5E-51 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_2402 3116b702b5792a5c6a52fde2ff5f1b5b 315 Pfam PF00691 OmpA family 195 293 5.2E-17 T 14-10-2018 IPR006665 OmpA-like domain VS_1047 923df590cef03d80b5596a4c1c4c0c32 646 Gene3D G3DSA:3.40.50.300 70 167 9.4E-6 T 14-10-2018 VS_1047 923df590cef03d80b5596a4c1c4c0c32 646 Pfam PF06798 PrkA serine protein kinase C-terminal domain 385 638 3.0E-72 T 14-10-2018 IPR010650 PrkA C-terminal domain VS_1047 923df590cef03d80b5596a4c1c4c0c32 646 PIRSF PIRSF000549 1 646 4.8E-285 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VS_1047 923df590cef03d80b5596a4c1c4c0c32 646 SUPERFAMILY SSF52540 77 370 1.8E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1047 923df590cef03d80b5596a4c1c4c0c32 646 SMART SM00763 21 382 1.6E-212 T 14-10-2018 IPR013153 PrkA AAA domain VS_1047 923df590cef03d80b5596a4c1c4c0c32 646 Pfam PF08298 PrkA AAA domain 22 382 3.9E-172 T 14-10-2018 IPR013153 PrkA AAA domain VS_1047 923df590cef03d80b5596a4c1c4c0c32 646 Gene3D G3DSA:3.40.50.300 219 362 3.5E-5 T 14-10-2018 VS_1381 6fad77dec4036dbc6d374cb2e82920e5 913 SUPERFAMILY SSF52540 324 720 1.05E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1381 6fad77dec4036dbc6d374cb2e82920e5 913 Pfam PF07728 AAA domain (dynein-related subfamily) 628 714 3.9E-9 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VS_1381 6fad77dec4036dbc6d374cb2e82920e5 913 Gene3D G3DSA:3.40.50.300 574 726 1.1E-9 T 14-10-2018 VS_2450 29e3669eeaf3f11125fd0a58b9be244f 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site VS_2450 29e3669eeaf3f11125fd0a58b9be244f 562 SUPERFAMILY SSF56801 15 548 1.44E-109 T 14-10-2018 VS_2450 29e3669eeaf3f11125fd0a58b9be244f 562 Pfam PF00501 AMP-binding enzyme 24 441 9.5E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_2450 29e3669eeaf3f11125fd0a58b9be244f 562 Gene3D G3DSA:3.40.50.12780 5 434 1.6E-84 T 14-10-2018 VS_1238 10c481a22dd650afee390abd4a53f151 635 Gene3D G3DSA:1.20.58.930 367 462 2.4E-234 T 14-10-2018 VS_1238 10c481a22dd650afee390abd4a53f151 635 TIGRFAM TIGR01273 speA: arginine decarboxylase 8 633 5.0E-266 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 SUPERFAMILY SSF50621 463 568 8.89E-6 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_1238 10c481a22dd650afee390abd4a53f151 635 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 76 345 3.5E-51 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VS_1238 10c481a22dd650afee390abd4a53f151 635 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 634 42.343 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 Gene3D G3DSA:3.20.20.10 66 350 2.4E-234 T 14-10-2018 IPR029066 PLP-binding barrel VS_1238 10c481a22dd650afee390abd4a53f151 635 Gene3D G3DSA:2.40.37.10 14 570 2.4E-234 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_1238 10c481a22dd650afee390abd4a53f151 635 SUPERFAMILY SSF51419 65 347 2.62E-64 T 14-10-2018 IPR029066 PLP-binding barrel VS_1238 10c481a22dd650afee390abd4a53f151 635 PIRSF PIRSF001336 2 635 2.8E-251 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 335 354 1.7E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 241 254 1.7E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 544 557 1.7E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 97 115 1.7E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 148 163 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 89 103 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 198 220 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 65 80 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 491 516 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 325 342 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 174 195 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 466 487 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_1238 10c481a22dd650afee390abd4a53f151 635 PRINTS PR01180 Arginine decarboxylase signature 544 565 7.6E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 Gene3D G3DSA:1.20.5.710 2 50 1.7E-22 T 14-10-2018 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 7.0E-17 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 2.6E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 SUPERFAMILY SSF48300 4 57 1.44E-14 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 8.7E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 1.1E-14 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 SUPERFAMILY SSF54736 51 121 2.09E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 24.567 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2964 7a00bbc4c7dcb90b8a7d856e1273f739 121 Gene3D G3DSA:3.30.1390.10 51 121 5.1E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 PIRSF PIRSF000977 1 474 1.3E-196 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 Gene3D G3DSA:3.30.420.10 2 199 2.8E-72 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 SMART SM00479 8 201 0.0064 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 Pfam PF08411 Exonuclease C-terminal 210 470 6.6E-105 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 SUPERFAMILY SSF53098 7 472 1.86E-137 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 Gene3D G3DSA:2.30.30.450 212 352 4.7E-56 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 Gene3D G3DSA:1.20.1280.70 358 419 1.6E-28 T 14-10-2018 VS_1713 ae1fbeb495e6a1c84b723df17100a770 474 Pfam PF00929 Exonuclease 11 191 8.8E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_0466 ea95807f8211c892224cc5252e94fbb4 289 Gene3D G3DSA:3.40.50.1980 36 155 3.5E-32 T 14-10-2018 VS_0466 ea95807f8211c892224cc5252e94fbb4 289 SUPERFAMILY SSF53807 36 282 4.71E-54 T 14-10-2018 VS_0466 ea95807f8211c892224cc5252e94fbb4 289 Gene3D G3DSA:3.40.50.1980 157 284 2.5E-28 T 14-10-2018 VS_0466 ea95807f8211c892224cc5252e94fbb4 289 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 16 286 47.757 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VS_0466 ea95807f8211c892224cc5252e94fbb4 289 Pfam PF01497 Periplasmic binding protein 40 261 6.4E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_2289 c3be4dbe2755c772473051b27b7c3d0f 322 SUPERFAMILY SSF53686 3 313 2.49E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_2289 c3be4dbe2755c772473051b27b7c3d0f 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.3E-140 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VS_2289 c3be4dbe2755c772473051b27b7c3d0f 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.3E-133 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VS_2289 c3be4dbe2755c772473051b27b7c3d0f 322 Gene3D G3DSA:3.40.50.1100 43 145 6.2E-125 T 14-10-2018 VS_2289 c3be4dbe2755c772473051b27b7c3d0f 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VS_2289 c3be4dbe2755c772473051b27b7c3d0f 322 Gene3D G3DSA:3.40.50.1100 12 306 6.2E-125 T 14-10-2018 VS_2289 c3be4dbe2755c772473051b27b7c3d0f 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 299 6.8E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_II0299 b335af0a4b5920d444b34bd764da708d 160 SUPERFAMILY SSF51316 32 159 1.67E-32 T 14-10-2018 IPR011057 Mss4-like superfamily VS_II0299 b335af0a4b5920d444b34bd764da708d 160 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 55 143 1.4E-20 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VS_II0299 b335af0a4b5920d444b34bd764da708d 160 Gene3D G3DSA:3.90.1590.10 20 144 2.8E-12 T 14-10-2018 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 Gene3D G3DSA:3.40.1190.10 1 287 8.9E-92 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 334 2.8E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 Pfam PF08245 Mur ligase middle domain 54 194 2.1E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 PIRSF PIRSF001563 7 420 8.2E-104 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 Gene3D G3DSA:3.90.190.20 288 420 9.5E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 SUPERFAMILY SSF53623 12 285 8.37E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 1.6E-101 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VS_0905 2d046a5cb3a1b5860a0c5e7bb631b680 420 SUPERFAMILY SSF53244 286 416 1.58E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_1520 89997dc5250c49315c43040d690f3988 278 Pfam PF00691 OmpA family 165 259 1.6E-19 T 14-10-2018 IPR006665 OmpA-like domain VS_1520 89997dc5250c49315c43040d690f3988 278 Gene3D G3DSA:3.30.1330.60 151 265 8.8E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1520 89997dc5250c49315c43040d690f3988 278 PRINTS PR01021 OMPA domain signature 210 226 2.1E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1520 89997dc5250c49315c43040d690f3988 278 PRINTS PR01021 OMPA domain signature 165 187 2.1E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1520 89997dc5250c49315c43040d690f3988 278 PRINTS PR01021 OMPA domain signature 195 210 2.1E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1520 89997dc5250c49315c43040d690f3988 278 SUPERFAMILY SSF103088 153 265 3.14E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_0400 8962dbe716c915639c08fade83ea80e8 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.9E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.344 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 Pfam PF01165 Ribosomal protein S21 4 56 5.3E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0400 8962dbe716c915639c08fade83ea80e8 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2287 b508e98c8e596a9a5333219496d45583 378 Gene3D G3DSA:3.30.1400.10 240 377 1.8E-45 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VS_2287 b508e98c8e596a9a5333219496d45583 378 SMART SM00771 239 369 5.9E-59 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VS_2287 b508e98c8e596a9a5333219496d45583 378 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 371 21.33 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VS_2287 b508e98c8e596a9a5333219496d45583 378 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 242 378 2.0E-55 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VS_2287 b508e98c8e596a9a5333219496d45583 378 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 369 3.4E-77 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VS_2287 b508e98c8e596a9a5333219496d45583 378 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 241 368 2.2E-42 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VS_2287 b508e98c8e596a9a5333219496d45583 378 SUPERFAMILY SSF64383 241 373 8.89E-45 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VS_0933 6a145754899b993bce26a4057d1f2847 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 35.5 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VS_0933 6a145754899b993bce26a4057d1f2847 139 Gene3D G3DSA:2.170.150.20 4 139 4.2E-58 T 14-10-2018 VS_0933 6a145754899b993bce26a4057d1f2847 139 SUPERFAMILY SSF51316 10 136 1.83E-55 T 14-10-2018 IPR011057 Mss4-like superfamily VS_0933 6a145754899b993bce26a4057d1f2847 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 137 2.9E-54 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VS_0933 6a145754899b993bce26a4057d1f2847 139 Pfam PF01641 SelR domain 15 132 2.4E-51 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VS_0914 2fffece935e1db3ca0268823a643f2e6 181 Gene3D G3DSA:3.40.50.2020 1 181 1.2E-64 T 14-10-2018 VS_0914 2fffece935e1db3ca0268823a643f2e6 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.855 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VS_0914 2fffece935e1db3ca0268823a643f2e6 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 5.6E-71 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VS_0914 2fffece935e1db3ca0268823a643f2e6 181 Pfam PF00156 Phosphoribosyl transferase domain 31 145 6.7E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VS_0914 2fffece935e1db3ca0268823a643f2e6 181 SUPERFAMILY SSF53271 10 178 1.99E-51 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_1594 78a342257c24a59d7b4e9175eaed58b7 286 Gene3D G3DSA:3.40.50.720 15 264 9.2E-21 T 14-10-2018 VS_1594 78a342257c24a59d7b4e9175eaed58b7 286 SUPERFAMILY SSF51735 15 246 6.47E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1852 21a8cd5469512ab50ac792a311311d26 405 Pfam PF07690 Major Facilitator Superfamily 29 369 1.6E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_1852 21a8cd5469512ab50ac792a311311d26 405 Gene3D G3DSA:1.20.1720.10 22 401 4.1E-105 T 14-10-2018 VS_1852 21a8cd5469512ab50ac792a311311d26 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 22 400 1.0E-117 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VS_1852 21a8cd5469512ab50ac792a311311d26 405 SUPERFAMILY SSF103473 9 403 7.19E-67 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II0402 360c0a1d6965f99820dea4218669a373 574 SUPERFAMILY SSF161098 30 285 5.89E-46 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0402 360c0a1d6965f99820dea4218669a373 574 Gene3D G3DSA:1.10.3720.10 28 291 2.7E-51 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0402 360c0a1d6965f99820dea4218669a373 574 Gene3D G3DSA:1.10.3720.10 310 564 1.0E-28 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0402 360c0a1d6965f99820dea4218669a373 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 392 562 1.0E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0402 360c0a1d6965f99820dea4218669a373 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 287 2.5E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0402 360c0a1d6965f99820dea4218669a373 574 SUPERFAMILY SSF161098 309 556 6.02E-32 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0402 360c0a1d6965f99820dea4218669a373 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 1.6E-249 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative VS_0225 f233a17903e67516826ff9a2fb888584 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 167 9.0E-11 T 14-10-2018 IPR001451 Hexapeptide repeat VS_0225 f233a17903e67516826ff9a2fb888584 194 Gene3D G3DSA:2.160.10.10 23 194 6.9E-42 T 14-10-2018 VS_0225 f233a17903e67516826ff9a2fb888584 194 SUPERFAMILY SSF51161 63 188 2.08E-36 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_2641 3da56ff3274ec5c7394da40cf3fb741d 237 Gene3D G3DSA:3.30.110.170 37 234 9.3E-48 T 14-10-2018 VS_2641 3da56ff3274ec5c7394da40cf3fb741d 237 Gene3D G3DSA:3.30.70.2970 47 154 9.3E-48 T 14-10-2018 VS_2641 3da56ff3274ec5c7394da40cf3fb741d 237 Pfam PF04402 Protein of unknown function (DUF541) 35 233 1.7E-39 T 14-10-2018 IPR007497 Protein of unknown function DUF541 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:3.30.70.1430 41 801 1.1E-250 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 SUPERFAMILY SSF82866 791 1027 2.49E-48 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 SUPERFAMILY SSF82714 184 263 9.02E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:1.20.1640.10 512 1018 1.1E-250 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 SUPERFAMILY SSF82693 41 133 5.49E-22 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:1.20.1640.10 13 511 1.1E-250 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:3.30.2090.10 179 270 1.1E-250 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 6.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 6.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 6.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:3.30.70.1440 654 852 1.1E-250 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:3.30.70.1430 567 653 1.1E-250 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:3.30.70.1320 135 325 1.1E-250 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 SUPERFAMILY SSF82693 147 325 1.1E-10 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Gene3D G3DSA:3.30.2090.10 705 793 1.1E-250 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 Pfam PF00873 AcrB/AcrD/AcrF family 7 1021 1.1E-162 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 SUPERFAMILY SSF82866 290 490 2.88E-39 T 14-10-2018 VS_2499 8077b2cb93a998438ef3b2c3ecfb4208 1029 SUPERFAMILY SSF82714 707 787 3.01E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 Pfam PF01235 Sodium:alanine symporter family 50 446 4.4E-138 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 PRINTS PR00175 Sodium/alanine symporter signature 182 200 1.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 PRINTS PR00175 Sodium/alanine symporter signature 210 229 1.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 PRINTS PR00175 Sodium/alanine symporter signature 305 323 1.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 PRINTS PR00175 Sodium/alanine symporter signature 351 373 1.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1291 ccee62727516cfa5dbe14a150d3fb3f0 456 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 439 3.7E-156 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 Pfam PF00625 Guanylate kinase 5 185 2.7E-60 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 Gene3D G3DSA:3.40.50.300 8 183 1.8E-72 T 14-10-2018 VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 SUPERFAMILY SSF52540 3 189 1.0E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.6E-74 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 SMART SM00072 3 187 1.0E-71 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.258 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VS_0161 9f6b626b3d5909ff4b969caafef61ef5 207 Gene3D G3DSA:3.30.63.10 37 96 1.8E-72 T 14-10-2018 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 SUPERFAMILY SSF55874 10 216 4.45E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 31.755 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 Gene3D G3DSA:3.40.50.11260 405 494 2.1E-34 T 14-10-2018 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 SMART SM00387 32 189 7.6E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 2.1E-12 T 14-10-2018 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 Pfam PF00183 Hsp90 protein 226 633 3.9E-127 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 Gene3D G3DSA:3.30.230.80 237 404 1.6E-69 T 14-10-2018 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 Gene3D G3DSA:1.20.120.790 501 632 8.9E-41 T 14-10-2018 IPR037196 HSP90, C-terminal domain VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 PIRSF PIRSF002583 1 634 6.3E-212 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 SUPERFAMILY SSF110942 520 632 2.22E-32 T 14-10-2018 IPR037196 HSP90, C-terminal domain VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 SUPERFAMILY SSF54211 238 493 1.29E-98 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2269 bd3e8a5e55f90d3e7d4d7ead42d01af3 634 Gene3D G3DSA:3.30.565.10 6 218 8.6E-74 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0792 ad7b88c33b2d7d31f18c2ae8e1301575 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 3.9E-26 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VS_0792 ad7b88c33b2d7d31f18c2ae8e1301575 377 Gene3D G3DSA:2.40.10.410 291 377 8.7E-35 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily VS_0792 ad7b88c33b2d7d31f18c2ae8e1301575 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 4.4E-26 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VS_0792 ad7b88c33b2d7d31f18c2ae8e1301575 377 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 7.3E-39 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain VS_0792 ad7b88c33b2d7d31f18c2ae8e1301575 377 Gene3D G3DSA:3.40.50.10610 114 290 3.5E-50 T 14-10-2018 VS_0792 ad7b88c33b2d7d31f18c2ae8e1301575 377 Gene3D G3DSA:3.30.1660.40 24 113 7.4E-36 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily VS_2024 146931ffd2c17b5d8ce9e239011b87ab 346 Pfam PF00155 Aminotransferase class I and II 44 338 2.8E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_2024 146931ffd2c17b5d8ce9e239011b87ab 346 SUPERFAMILY SSF53383 10 344 7.48E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2024 146931ffd2c17b5d8ce9e239011b87ab 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VS_2024 146931ffd2c17b5d8ce9e239011b87ab 346 Gene3D G3DSA:3.40.640.10 49 253 1.8E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2024 146931ffd2c17b5d8ce9e239011b87ab 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.017 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VS_2024 146931ffd2c17b5d8ce9e239011b87ab 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 4.3E-117 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VS_2024 146931ffd2c17b5d8ce9e239011b87ab 346 Gene3D G3DSA:3.90.1150.10 4 336 1.8E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 SMART SM00926 11 65 2.2E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Gene3D G3DSA:2.40.40.20 594 744 2.7E-34 T 14-10-2018 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 SUPERFAMILY SSF53706 13 592 1.19E-179 T 14-10-2018 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 PIRSF PIRSF036643 1 755 1.4E-143 T 14-10-2018 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 13 63 8.6E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Gene3D G3DSA:3.40.50.740 78 526 1.0E-169 T 14-10-2018 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Gene3D G3DSA:2.20.25.90 7 64 1.4E-13 T 14-10-2018 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Pfam PF00384 Molybdopterin oxidoreductase 68 502 4.1E-81 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Pfam PF01568 Molydopterin dinucleotide binding domain 605 650 2.3E-7 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Pfam PF01568 Molydopterin dinucleotide binding domain 671 732 4.3E-12 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 SUPERFAMILY SSF50692 596 762 2.26E-31 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VS_II1026 04f2c0677fbfb648b61af2f878ee0013 865 Gene3D G3DSA:3.40.228.10 146 354 1.0E-169 T 14-10-2018 VS_1582 f85420c294124007e7e0f3262b86d1c7 162 Pfam PF13508 Acetyltransferase (GNAT) domain 45 128 1.6E-9 T 14-10-2018 IPR000182 GNAT domain VS_1582 f85420c294124007e7e0f3262b86d1c7 162 SUPERFAMILY SSF55729 24 161 1.46E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1582 f85420c294124007e7e0f3262b86d1c7 162 Gene3D G3DSA:3.40.630.30 7 162 1.8E-35 T 14-10-2018 VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 167 1.2E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 103 114 1.2E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 26 43 1.2E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 1.2E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 1.2E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 25 190 0.0061 T 14-10-2018 VS_1043 e659bc86e8942a929f12c36681059fdc 258 Gene3D G3DSA:3.40.50.720 12 257 1.4E-70 T 14-10-2018 VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 4.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 103 114 4.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 4.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 Pfam PF00106 short chain dehydrogenase 25 220 1.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1043 e659bc86e8942a929f12c36681059fdc 258 SUPERFAMILY SSF51735 20 253 1.24E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1043 e659bc86e8942a929f12c36681059fdc 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 164 192 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 SUPERFAMILY SSF57716 142 190 1.24E-15 T 14-10-2018 VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 SUPERFAMILY SSF52540 2 141 7.74E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 Gene3D G3DSA:3.30.60.20 144 189 7.0E-7 T 14-10-2018 VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.377 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 Pfam PF00265 Thymidine kinase 2 186 6.7E-59 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 PIRSF PIRSF035805 1 192 1.4E-56 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VS_2013 d7738abbc6099830ffa45fa8d675ffef 192 Gene3D G3DSA:3.40.50.300 2 140 1.9E-24 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.8E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VS_0473 0776780417827acd09bc66a40546121b 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 3.4E-196 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VS_0473 0776780417827acd09bc66a40546121b 489 SUPERFAMILY SSF46548 2 155 3.66E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_0473 0776780417827acd09bc66a40546121b 489 SUPERFAMILY SSF51971 143 407 1.41E-63 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 Gene3D G3DSA:3.50.50.60 253 406 1.6E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0473 0776780417827acd09bc66a40546121b 489 Gene3D G3DSA:3.40.50.720 144 252 3.9E-16 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 SUPERFAMILY SSF51971 389 474 3.06E-8 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.0E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_0473 0776780417827acd09bc66a40546121b 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 5.3E-23 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 5.3E-23 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 5.3E-23 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 5.3E-23 T 14-10-2018 VS_0473 0776780417827acd09bc66a40546121b 489 Gene3D G3DSA:1.10.1060.10 12 143 3.5E-24 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_1982 7cdc0358118bf38a489212459f7223ed 394 Gene3D G3DSA:3.40.640.10 2 255 4.3E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1982 7cdc0358118bf38a489212459f7223ed 394 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 7.0E-174 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VS_1982 7cdc0358118bf38a489212459f7223ed 394 SUPERFAMILY SSF53383 23 388 6.72E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1982 7cdc0358118bf38a489212459f7223ed 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_1982 7cdc0358118bf38a489212459f7223ed 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 387 5.9E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_1982 7cdc0358118bf38a489212459f7223ed 394 Gene3D G3DSA:3.90.1150.10 256 390 6.3E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1982 7cdc0358118bf38a489212459f7223ed 394 PIRSF PIRSF001434 1 391 3.9E-125 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 287 22.527 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 273 7.9E-69 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 Pfam PF07549 SecD/SecF GG Motif 28 54 1.0E-8 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 SUPERFAMILY SSF82866 90 274 1.44E-32 T 14-10-2018 VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 76 271 7.8E-50 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 Pfam PF02355 Protein export membrane protein 101 275 1.9E-55 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 142 156 2.0E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 2.0E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 222 237 2.0E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 PRINTS PR01755 Bacterial translocase SecF protein signature 190 208 2.0E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II0240 741a2bd25f4dfe819bdde36f5f8e21e0 300 Gene3D G3DSA:1.20.1640.10 101 294 3.0E-12 T 14-10-2018 VS_II0311 bfaa406cfbdcd00dbadd8835adc8a5b1 337 PIRSF PIRSF039012 10 337 1.1E-84 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VS_II0311 bfaa406cfbdcd00dbadd8835adc8a5b1 337 SUPERFAMILY SSF53187 28 335 6.95E-52 T 14-10-2018 VS_II0311 bfaa406cfbdcd00dbadd8835adc8a5b1 337 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 335 4.3E-60 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VS_II0311 bfaa406cfbdcd00dbadd8835adc8a5b1 337 Gene3D G3DSA:3.40.630.10 19 335 8.3E-70 T 14-10-2018 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 223.336 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.8E-68 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 SMART SM00981 76 165 2.3E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 Gene3D G3DSA:3.30.2130.30 1 174 1.2E-33 T 14-10-2018 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 SUPERFAMILY SSF52402 174 372 2.43E-39 T 14-10-2018 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 Gene3D G3DSA:3.40.250.10 398 482 1.7E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 SUPERFAMILY SSF52821 398 481 3.4E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 SUPERFAMILY SSF143437 1 173 3.84E-47 T 14-10-2018 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 Pfam PF02926 THUMP domain 52 158 1.6E-20 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 4.6E-111 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.1E-42 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 VS_2401 62b15c99b1d982c6f962880fb68adbeb 482 Gene3D G3DSA:3.40.50.620 175 397 4.6E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2151 75a2cf6d93d47e337bfa63fe3a688d58 308 Pfam PF00535 Glycosyl transferase family 2 5 112 4.0E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VS_2151 75a2cf6d93d47e337bfa63fe3a688d58 308 Gene3D G3DSA:3.90.550.10 1 256 6.8E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2151 75a2cf6d93d47e337bfa63fe3a688d58 308 SUPERFAMILY SSF53448 3 224 7.5E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2288 c9e7a36493f73e4a46292dc3efb1e6ef 252 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.08 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VS_2288 c9e7a36493f73e4a46292dc3efb1e6ef 252 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 14 229 5.1E-39 T 14-10-2018 VS_1964 9306ccae442bab7020204364aad82eb8 307 Gene3D G3DSA:1.10.150.650 121 192 1.5E-80 T 14-10-2018 VS_1964 9306ccae442bab7020204364aad82eb8 307 Gene3D G3DSA:3.20.20.140 26 273 1.5E-80 T 14-10-2018 VS_1964 9306ccae442bab7020204364aad82eb8 307 SUPERFAMILY SSF89550 23 298 2.88E-54 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VS_1964 9306ccae442bab7020204364aad82eb8 307 SMART SM00481 26 93 6.0E-17 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VS_1964 9306ccae442bab7020204364aad82eb8 307 Pfam PF02811 PHP domain 27 204 1.4E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 VS_II0928 e8a156294e4a63552cba6a3a932ed216 635 SUPERFAMILY SSF51556 88 538 8.17E-24 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_II0928 e8a156294e4a63552cba6a3a932ed216 635 Pfam PF07969 Amidohydrolase family 82 574 1.2E-42 T 14-10-2018 IPR013108 Amidohydrolase 3 VS_II0928 e8a156294e4a63552cba6a3a932ed216 635 Gene3D G3DSA:3.20.20.140 89 537 5.3E-82 T 14-10-2018 VS_II0928 e8a156294e4a63552cba6a3a932ed216 635 Gene3D G3DSA:2.30.40.10 35 554 5.3E-82 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_II0928 e8a156294e4a63552cba6a3a932ed216 635 Gene3D G3DSA:3.10.310.70 114 232 5.3E-82 T 14-10-2018 VS_II0928 e8a156294e4a63552cba6a3a932ed216 635 SUPERFAMILY SSF51338 38 576 1.1E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 Gene3D G3DSA:3.30.70.920 66 158 6.8E-19 T 14-10-2018 VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 61 1.3E-13 T 14-10-2018 VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 6.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 6.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 6.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 SUPERFAMILY SSF46785 14 74 6.67E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 Gene3D G3DSA:1.10.10.10 14 65 8.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 SMART SM00344 14 123 2.6E-34 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 SUPERFAMILY SSF54909 75 163 1.05E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0049 afe654f49ff8448950dc9e8ec0edda97 168 Pfam PF01037 Lrp/AsnC ligand binding domain 80 153 8.1E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_2825 238c2b66de57b4637b65e15f5d93332a 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 SMART SM00322 60 125 1.8E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 SUPERFAMILY SSF54821 108 206 2.09E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.675 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 Gene3D G3DSA:3.30.300.20 17 107 1.3E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_2825 238c2b66de57b4637b65e15f5d93332a 232 SUPERFAMILY SSF54814 2 106 5.23E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 7.5E-41 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-97 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 Gene3D G3DSA:3.30.1140.32 108 208 1.7E-44 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2825 238c2b66de57b4637b65e15f5d93332a 232 Pfam PF07650 KH domain 38 111 6.7E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0949 da16a6bf8b92d008dcb3b854a336ac36 598 PIRSF PIRSF004950 6 596 3.3E-227 T 14-10-2018 IPR012159 Inner membrane protein YejM VS_0949 da16a6bf8b92d008dcb3b854a336ac36 598 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 1.1E-99 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VS_0949 da16a6bf8b92d008dcb3b854a336ac36 598 SUPERFAMILY SSF53649 259 578 3.2E-38 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_0949 da16a6bf8b92d008dcb3b854a336ac36 598 Gene3D G3DSA:3.40.720.10 246 544 7.9E-33 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_0949 da16a6bf8b92d008dcb3b854a336ac36 598 Pfam PF00884 Sulfatase 283 511 6.9E-14 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VS_2607 deb320fdd5992013f76d712a97630981 450 SMART SM01193 22 152 1.9E-90 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 Pfam PF03952 Enolase, N-terminal domain 22 152 6.0E-57 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 PRINTS PR00148 Enolase signature 335 346 4.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 PRINTS PR00148 Enolase signature 387 404 4.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 PRINTS PR00148 Enolase signature 55 69 4.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 PRINTS PR00148 Enolase signature 183 196 4.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 PRINTS PR00148 Enolase signature 125 141 4.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 PRINTS PR00148 Enolase signature 358 372 4.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 Gene3D G3DSA:3.20.20.120 146 450 7.1E-132 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VS_2607 deb320fdd5992013f76d712a97630981 450 SUPERFAMILY SSF51604 161 447 2.12E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VS_2607 deb320fdd5992013f76d712a97630981 450 Hamap MF_00318 Enolase [eno]. 20 435 43.995 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 SUPERFAMILY SSF54826 21 156 4.12E-55 T 14-10-2018 VS_2607 deb320fdd5992013f76d712a97630981 450 PIRSF PIRSF001400 18 449 2.0E-190 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 22 447 2.8E-205 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 ProSitePatterns PS00164 Enolase signature. 358 371 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2607 deb320fdd5992013f76d712a97630981 450 Gene3D G3DSA:3.30.390.10 19 145 6.8E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal VS_2607 deb320fdd5992013f76d712a97630981 450 Pfam PF00113 Enolase, C-terminal TIM barrel domain 162 448 3.5E-136 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_2607 deb320fdd5992013f76d712a97630981 450 SMART SM01192 161 449 1.8E-211 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_II0058 5924c42f576499cb8343820c91566c15 570 Gene3D G3DSA:3.30.410.40 151 479 6.1E-170 T 14-10-2018 VS_II0058 5924c42f576499cb8343820c91566c15 570 Pfam PF00732 GMC oxidoreductase 5 305 3.2E-87 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VS_II0058 5924c42f576499cb8343820c91566c15 570 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VS_II0058 5924c42f576499cb8343820c91566c15 570 Gene3D G3DSA:4.10.450.10 38 198 6.1E-170 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 VS_II0058 5924c42f576499cb8343820c91566c15 570 Gene3D G3DSA:1.10.1220.110 97 150 6.1E-170 T 14-10-2018 VS_II0058 5924c42f576499cb8343820c91566c15 570 Pfam PF05199 GMC oxidoreductase 396 534 1.2E-40 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VS_II0058 5924c42f576499cb8343820c91566c15 570 SUPERFAMILY SSF51905 1 541 4.81E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0058 5924c42f576499cb8343820c91566c15 570 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 542 1.2E-235 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VS_II0058 5924c42f576499cb8343820c91566c15 570 Gene3D G3DSA:3.50.50.60 5 538 6.1E-170 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0058 5924c42f576499cb8343820c91566c15 570 PIRSF PIRSF000137 1 549 1.6E-141 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VS_II0058 5924c42f576499cb8343820c91566c15 570 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 561 59.442 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VS_II0058 5924c42f576499cb8343820c91566c15 570 SUPERFAMILY SSF54373 300 481 1.28E-60 T 14-10-2018 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 342 354 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 Gene3D G3DSA:3.40.50.620 4 221 2.2E-61 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 Gene3D G3DSA:1.25.40.80 127 306 2.2E-61 T 14-10-2018 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 Pfam PF00875 DNA photolyase 4 158 2.4E-38 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 Pfam PF03441 FAD binding domain of DNA photolyase 292 485 7.1E-82 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 SUPERFAMILY SSF52425 4 188 1.01E-47 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 PRINTS PR00147 DNA photolyase signature 342 358 4.4E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 PRINTS PR00147 DNA photolyase signature 401 415 4.4E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 PRINTS PR00147 DNA photolyase signature 138 154 4.4E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 PRINTS PR00147 DNA photolyase signature 362 380 4.4E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 Gene3D G3DSA:1.10.579.10 310 486 2.1E-77 T 14-10-2018 VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 362 381 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VS_II1451 62e4946742d67369caaa6ae3a499fbd8 486 SUPERFAMILY SSF48173 208 485 4.97E-100 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VS_II0593 d0bb51d483532d1f50c33524bc35bb2f 455 Gene3D G3DSA:2.20.200.10 104 343 8.4E-77 T 14-10-2018 VS_II0593 d0bb51d483532d1f50c33524bc35bb2f 455 Pfam PF02321 Outer membrane efflux protein 67 245 8.2E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0593 d0bb51d483532d1f50c33524bc35bb2f 455 Pfam PF02321 Outer membrane efflux protein 278 452 7.3E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0593 d0bb51d483532d1f50c33524bc35bb2f 455 SUPERFAMILY SSF56954 4 454 6.41E-69 T 14-10-2018 VS_II0593 d0bb51d483532d1f50c33524bc35bb2f 455 Gene3D G3DSA:1.20.1600.10 61 454 8.4E-77 T 14-10-2018 VS_1208 da7e3d5388889b2ee5055046b348252f 366 SUPERFAMILY SSF81901 48 177 6.41E-22 T 14-10-2018 VS_1208 da7e3d5388889b2ee5055046b348252f 366 SUPERFAMILY SSF46565 310 362 3.4E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_1208 da7e3d5388889b2ee5055046b348252f 366 Gene3D G3DSA:1.10.287.110 291 366 1.3E-9 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_1208 da7e3d5388889b2ee5055046b348252f 366 Pfam PF08238 Sel1 repeat 50 85 9.5E-6 T 14-10-2018 IPR006597 Sel1-like repeat VS_1208 da7e3d5388889b2ee5055046b348252f 366 Pfam PF08238 Sel1 repeat 86 121 1.2E-8 T 14-10-2018 IPR006597 Sel1-like repeat VS_1208 da7e3d5388889b2ee5055046b348252f 366 Gene3D G3DSA:1.25.40.10 41 205 6.6E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1208 da7e3d5388889b2ee5055046b348252f 366 SMART SM00671 50 85 1.1E-6 T 14-10-2018 IPR006597 Sel1-like repeat VS_1208 da7e3d5388889b2ee5055046b348252f 366 SMART SM00671 86 121 3.5E-10 T 14-10-2018 IPR006597 Sel1-like repeat VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 Gene3D G3DSA:3.40.50.150 31 276 2.4E-105 T 14-10-2018 VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 Pfam PF01266 FAD dependent oxidoreductase 289 669 9.8E-43 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 289 699 5.0E-143 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 29 694 27.281 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 140 265 2.3E-45 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 Gene3D G3DSA:3.50.50.60 289 696 1.2E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 SUPERFAMILY SSF51905 289 698 8.63E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0897 f6e8e9d5a35c67f012523f9d2f00e88f 716 Gene3D G3DSA:3.30.9.10 373 601 1.2E-127 T 14-10-2018 VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 SMART SM00862 150 225 1.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 6.0E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 Pfam PF00072 Response regulator receiver domain 5 116 5.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 SUPERFAMILY SSF52172 3 183 9.67E-43 T 14-10-2018 IPR011006 CheY-like superfamily VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 Gene3D G3DSA:3.40.50.2300 1 126 1.9E-38 T 14-10-2018 VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 Gene3D G3DSA:1.10.10.10 127 228 1.6E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 SMART SM00448 3 116 3.3E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0579 f2ede5032f3f45843f1d1aafe3857a7a 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.5E-112 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VS_2519 5577f7f6eeebe2562a12bb93b140c4e4 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 6.1E-204 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype VS_2519 5577f7f6eeebe2562a12bb93b140c4e4 409 SUPERFAMILY SSF111352 12 383 6.93E-105 T 14-10-2018 VS_2519 5577f7f6eeebe2562a12bb93b140c4e4 409 Pfam PF00909 Ammonium Transporter Family 18 402 5.4E-99 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VS_2519 5577f7f6eeebe2562a12bb93b140c4e4 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VS_2519 5577f7f6eeebe2562a12bb93b140c4e4 409 Gene3D G3DSA:1.10.3430.10 2 408 2.8E-118 T 14-10-2018 IPR029020 Ammonium/urea transporter VS_1787 23b42a0619047c97b91976af7f129eb9 659 SUPERFAMILY SSF53067 27 220 3.42E-27 T 14-10-2018 VS_1787 23b42a0619047c97b91976af7f129eb9 659 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 31 38 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_1787 23b42a0619047c97b91976af7f129eb9 659 PRINTS PR00301 70kDa heat shock protein signature 178 198 5.3E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1787 23b42a0619047c97b91976af7f129eb9 659 PRINTS PR00301 70kDa heat shock protein signature 245 255 5.3E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1787 23b42a0619047c97b91976af7f129eb9 659 PRINTS PR00301 70kDa heat shock protein signature 27 40 5.3E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1787 23b42a0619047c97b91976af7f129eb9 659 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 239 252 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_1787 23b42a0619047c97b91976af7f129eb9 659 Pfam PF00012 Hsp70 protein 29 353 1.2E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_1787 23b42a0619047c97b91976af7f129eb9 659 Gene3D G3DSA:3.30.420.40 29 229 1.4E-34 T 14-10-2018 VS_1787 23b42a0619047c97b91976af7f129eb9 659 Gene3D G3DSA:3.90.640.10 275 355 1.4E-34 T 14-10-2018 VS_1787 23b42a0619047c97b91976af7f129eb9 659 SUPERFAMILY SSF53067 234 500 9.57E-25 T 14-10-2018 VS_1787 23b42a0619047c97b91976af7f129eb9 659 Gene3D G3DSA:3.30.420.40 232 274 1.4E-34 T 14-10-2018 VS_2039 03e2e9c11c5f32e7f2f04ed94c75a9be 415 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VS_2039 03e2e9c11c5f32e7f2f04ed94c75a9be 415 Pfam PF00155 Aminotransferase class I and II 54 387 2.2E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_2039 03e2e9c11c5f32e7f2f04ed94c75a9be 415 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 16 392 44.572 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VS_2039 03e2e9c11c5f32e7f2f04ed94c75a9be 415 SUPERFAMILY SSF53383 13 394 1.1E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2039 03e2e9c11c5f32e7f2f04ed94c75a9be 415 Gene3D G3DSA:3.90.1150.10 54 384 2.6E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2039 03e2e9c11c5f32e7f2f04ed94c75a9be 415 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 33 388 5.4E-136 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VS_2039 03e2e9c11c5f32e7f2f04ed94c75a9be 415 Gene3D G3DSA:3.40.640.10 70 295 2.6E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 SUPERFAMILY SSF55068 22 205 4.19E-69 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 34.679 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 Gene3D G3DSA:2.170.150.20 233 380 3.7E-56 T 14-10-2018 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 41 192 4.6E-50 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 34.551 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 1.1E-55 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 Pfam PF01641 SelR domain 243 362 1.6E-45 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 Gene3D G3DSA:3.30.1060.10 26 210 2.4E-61 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 SUPERFAMILY SSF51316 238 379 1.83E-58 T 14-10-2018 IPR011057 Mss4-like superfamily VS_II0393 83cd353bfc1d2473f9b6fb6ea0e3c1fd 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 371 2.4E-59 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 437 32.176 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 Gene3D G3DSA:3.40.1190.10 97 299 1.8E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 SUPERFAMILY SSF51984 8 97 3.53E-16 T 14-10-2018 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 375 4.5E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 435 4.8E-128 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 Pfam PF08245 Mur ligase middle domain 113 279 2.0E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 Gene3D G3DSA:3.40.50.720 5 96 6.2E-18 T 14-10-2018 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 Gene3D G3DSA:3.90.190.20 300 434 6.8E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 SUPERFAMILY SSF53623 99 297 4.45E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0448 4860baa1a29c81827d444fc80f1ba54b 438 SUPERFAMILY SSF53244 299 437 1.51E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_II0305 e7893bdab92a7ea5e09179ac5e2944ea 401 Pfam PF07690 Major Facilitator Superfamily 22 354 3.5E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II0305 e7893bdab92a7ea5e09179ac5e2944ea 401 SUPERFAMILY SSF103473 7 389 2.75E-55 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II0305 e7893bdab92a7ea5e09179ac5e2944ea 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 371 1.3E-60 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VS_II0305 e7893bdab92a7ea5e09179ac5e2944ea 401 Gene3D G3DSA:1.20.1720.10 11 386 1.2E-85 T 14-10-2018 VS_0098 1e53889877ad435ff8c2400102e09013 264 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 38 263 1.2E-83 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VS_0098 1e53889877ad435ff8c2400102e09013 264 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 171 185 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VS_0098 1e53889877ad435ff8c2400102e09013 264 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 49 64 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VS_0098 1e53889877ad435ff8c2400102e09013 264 SUPERFAMILY SSF53335 32 262 1.55E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0098 1e53889877ad435ff8c2400102e09013 264 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 29 263 38.206 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VS_0098 1e53889877ad435ff8c2400102e09013 264 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 263 9.1E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VS_0098 1e53889877ad435ff8c2400102e09013 264 Gene3D G3DSA:3.40.50.150 44 264 2.4E-75 T 14-10-2018 VS_1397 1b11bb9e7d858104799a157b2ac8d517 95 Pfam PF00708 Acylphosphatase 8 85 7.9E-23 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VS_1397 1b11bb9e7d858104799a157b2ac8d517 95 Gene3D G3DSA:3.30.70.100 2 95 3.5E-26 T 14-10-2018 VS_1397 1b11bb9e7d858104799a157b2ac8d517 95 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VS_1397 1b11bb9e7d858104799a157b2ac8d517 95 SUPERFAMILY SSF54975 2 82 4.36E-24 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VS_II1151 760a6567d9e340bc6c1404c8f1c9dac8 350 Pfam PF00248 Aldo/keto reductase family 15 340 2.1E-65 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VS_II1151 760a6567d9e340bc6c1404c8f1c9dac8 350 Gene3D G3DSA:3.20.20.100 1 350 4.8E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VS_II1151 760a6567d9e340bc6c1404c8f1c9dac8 350 SUPERFAMILY SSF51430 1 349 8.12E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VS_II0919 911b483673cad45a5abbb9112421701e 379 Gene3D G3DSA:1.10.287.470 113 186 8.9E-76 T 14-10-2018 VS_II0919 911b483673cad45a5abbb9112421701e 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 54 377 6.8E-73 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II0919 911b483673cad45a5abbb9112421701e 379 Gene3D G3DSA:2.40.50.100 78 221 8.9E-76 T 14-10-2018 VS_II0919 911b483673cad45a5abbb9112421701e 379 Gene3D G3DSA:2.40.30.170 71 307 8.9E-76 T 14-10-2018 VS_II0919 911b483673cad45a5abbb9112421701e 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 297 6.1E-9 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II0919 911b483673cad45a5abbb9112421701e 379 SUPERFAMILY SSF111369 70 301 1.83E-48 T 14-10-2018 VS_II0919 911b483673cad45a5abbb9112421701e 379 Gene3D G3DSA:2.40.420.20 308 375 8.9E-76 T 14-10-2018 VS_0436 e2c53909971d5f56c654a8ca8caa09d5 201 SMART SM00749 133 196 5.9E-5 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VS_0436 e2c53909971d5f56c654a8ca8caa09d5 201 SMART SM00749 56 119 5.5 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VS_0436 e2c53909971d5f56c654a8ca8caa09d5 201 Pfam PF04972 BON domain 51 118 9.7E-12 T 14-10-2018 IPR007055 BON domain VS_0436 e2c53909971d5f56c654a8ca8caa09d5 201 Pfam PF04972 BON domain 129 193 5.1E-14 T 14-10-2018 IPR007055 BON domain VS_II0131 a15c8cf6b55f4f5c08e49fb188da7c9b 84 SUPERFAMILY SSF51366 16 79 6.85E-19 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_II0131 a15c8cf6b55f4f5c08e49fb188da7c9b 84 Pfam PF00834 Ribulose-phosphate 3 epimerase family 17 64 1.6E-14 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VS_II0131 a15c8cf6b55f4f5c08e49fb188da7c9b 84 Gene3D G3DSA:3.20.20.70 11 82 4.0E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1968 9651db4c005566812e6097b28cccd30b 331 Pfam PF00591 Glycosyl transferase family, a/b domain 71 321 1.1E-103 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_1968 9651db4c005566812e6097b28cccd30b 331 SUPERFAMILY SSF52418 69 328 7.98E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_1968 9651db4c005566812e6097b28cccd30b 331 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 4 328 4.4E-128 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VS_1968 9651db4c005566812e6097b28cccd30b 331 Gene3D G3DSA:3.40.1030.10 66 320 1.1E-122 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_1968 9651db4c005566812e6097b28cccd30b 331 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 330 39.615 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VS_1968 9651db4c005566812e6097b28cccd30b 331 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 62 3.7E-16 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_1968 9651db4c005566812e6097b28cccd30b 331 Gene3D G3DSA:1.20.970.10 9 182 1.1E-122 T 14-10-2018 VS_1968 9651db4c005566812e6097b28cccd30b 331 SUPERFAMILY SSF47648 2 66 1.3E-18 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2146 16a00d45f2806ecaf327b12d22611994 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 VS_2146 16a00d45f2806ecaf327b12d22611994 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 7.9E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VS_2146 16a00d45f2806ecaf327b12d22611994 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 7.9E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VS_2146 16a00d45f2806ecaf327b12d22611994 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 7.9E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VS_2146 16a00d45f2806ecaf327b12d22611994 181 Gene3D G3DSA:3.40.30.10 23 181 1.8E-42 T 14-10-2018 VS_2146 16a00d45f2806ecaf327b12d22611994 181 SUPERFAMILY SSF52833 46 181 1.44E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2146 16a00d45f2806ecaf327b12d22611994 181 Pfam PF00255 Glutathione peroxidase 44 133 8.7E-26 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VS_2146 16a00d45f2806ecaf327b12d22611994 181 PIRSF PIRSF000303 1 181 1.1E-53 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 111 6.9E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 PRINTS PR00421 Thioredoxin family signature 36 45 3.5E-10 T 14-10-2018 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 PRINTS PR00421 Thioredoxin family signature 76 87 3.5E-10 T 14-10-2018 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 PRINTS PR00421 Thioredoxin family signature 28 36 3.5E-10 T 14-10-2018 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 PIRSF PIRSF000077 6 112 3.9E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 Gene3D G3DSA:3.40.30.10 2 112 4.4E-35 T 14-10-2018 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 SUPERFAMILY SSF52833 6 111 2.21E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 Pfam PF00085 Thioredoxin 9 110 8.2E-33 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VS_3072 cd1bbbc2cc9ba8b648f9a5aae498bb4d 112 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VS_2682 53b5df62ce6188c96a98d99373142ec6 345 Gene3D G3DSA:3.40.50.300 101 344 2.6E-102 T 14-10-2018 VS_2682 53b5df62ce6188c96a98d99373142ec6 345 Gene3D G3DSA:3.30.450.90 1 100 3.9E-35 T 14-10-2018 VS_2682 53b5df62ce6188c96a98d99373142ec6 345 Pfam PF00437 Type II/IV secretion system protein 12 270 6.5E-46 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_2682 53b5df62ce6188c96a98d99373142ec6 345 SUPERFAMILY SSF52540 5 336 1.41E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2682 53b5df62ce6188c96a98d99373142ec6 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 334 8.2E-151 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VS_2682 53b5df62ce6188c96a98d99373142ec6 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_II1141 cb77329c4b61e1468387caddb6c5df8b 271 Pfam PF12727 PBP superfamily domain 40 253 5.6E-39 T 14-10-2018 IPR024370 PBP domain VS_II1141 cb77329c4b61e1468387caddb6c5df8b 271 SUPERFAMILY SSF53850 25 270 5.07E-65 T 14-10-2018 VS_II1141 cb77329c4b61e1468387caddb6c5df8b 271 Gene3D G3DSA:3.40.190.10 97 231 2.5E-80 T 14-10-2018 VS_II1141 cb77329c4b61e1468387caddb6c5df8b 271 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 10 268 4.1E-66 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VS_II1141 cb77329c4b61e1468387caddb6c5df8b 271 Gene3D G3DSA:3.40.190.10 26 267 2.5E-80 T 14-10-2018 VS_0588 406d5ad455b25e59a03eb776afb5796d 232 Pfam PF01895 PhoU domain 128 210 8.9E-16 T 14-10-2018 IPR026022 PhoU domain VS_0588 406d5ad455b25e59a03eb776afb5796d 232 Pfam PF01895 PhoU domain 23 108 9.7E-23 T 14-10-2018 IPR026022 PhoU domain VS_0588 406d5ad455b25e59a03eb776afb5796d 232 Gene3D G3DSA:1.20.58.220 119 229 4.8E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily VS_0588 406d5ad455b25e59a03eb776afb5796d 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.8E-76 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VS_0588 406d5ad455b25e59a03eb776afb5796d 232 PIRSF PIRSF003107 4 223 3.1E-71 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VS_0588 406d5ad455b25e59a03eb776afb5796d 232 Gene3D G3DSA:1.20.58.220 2 118 1.1E-41 T 14-10-2018 IPR038078 PhoU-like domain superfamily VS_0588 406d5ad455b25e59a03eb776afb5796d 232 SUPERFAMILY SSF109755 10 225 2.41E-71 T 14-10-2018 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 SUPERFAMILY SSF69055 260 358 3.4E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 Gene3D G3DSA:1.10.1740.10 271 360 4.4E-27 T 14-10-2018 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 SUPERFAMILY SSF55347 85 233 6.87E-63 T 14-10-2018 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 356 1.8E-143 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 105 198 3.0E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 Pfam PF13288 DXP reductoisomerase C-terminal domain 230 350 3.3E-38 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 Gene3D G3DSA:3.40.50.720 1 109 1.7E-31 T 14-10-2018 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 SUPERFAMILY SSF51735 3 109 7.74E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 PIRSF PIRSF006205 1 361 5.7E-136 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 355 37.896 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VS_2346 9b6efe71651c1a4440d39e6807d755c8 361 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 91 4.3E-26 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VS_0246 de8ee7f8bf0fd5d025b863460be6c857 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.0E-48 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VS_0246 de8ee7f8bf0fd5d025b863460be6c857 127 PIRSF PIRSF000180 1 127 4.9E-56 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VS_0246 de8ee7f8bf0fd5d025b863460be6c857 127 Gene3D G3DSA:1.20.1300.10 1 127 3.5E-46 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0246 de8ee7f8bf0fd5d025b863460be6c857 127 SUPERFAMILY SSF81343 1 127 7.85E-52 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0246 de8ee7f8bf0fd5d025b863460be6c857 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 2.0E-47 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VS_0246 de8ee7f8bf0fd5d025b863460be6c857 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.852 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VS_0577 0254e897cbff3e6448bcbbb686a4b334 472 Pfam PF01136 Peptidase family U32 80 361 2.0E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VS_0577 0254e897cbff3e6448bcbbb686a4b334 472 Gene3D G3DSA:2.40.30.10 373 459 2.4E-7 T 14-10-2018 VS_0577 0254e897cbff3e6448bcbbb686a4b334 472 Pfam PF16325 Peptidase family U32 C-terminal domain 377 458 1.1E-19 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal VS_0577 0254e897cbff3e6448bcbbb686a4b334 472 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 SMART SM00387 321 431 1.1E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 SUPERFAMILY SSF158472 171 219 8.63E-6 T 14-10-2018 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 SUPERFAMILY SSF47384 215 277 5.49E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 Gene3D G3DSA:3.30.565.10 285 431 2.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 SUPERFAMILY SSF55874 290 430 7.99E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 SMART SM00388 222 282 2.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 429 8.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 Gene3D G3DSA:1.10.287.130 167 277 2.6E-24 T 14-10-2018 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 SMART SM00304 169 221 2.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0157 7e70b6113aaee5e4d7e8b827d789918e 431 Pfam PF00672 HAMP domain 169 217 9.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1329 01a5ddc11453e1200b515a9b641b8a9a 140 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 19 129 7.1E-16 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VS_1329 01a5ddc11453e1200b515a9b641b8a9a 140 Pfam PF04965 Gene 25-like lysozyme 19 114 1.2E-12 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VS_1329 01a5ddc11453e1200b515a9b641b8a9a 140 SUPERFAMILY SSF160719 52 122 1.7E-6 T 14-10-2018 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 Pfam PF13432 Tetratricopeptide repeat 50 109 2.6E-4 T 14-10-2018 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 Gene3D G3DSA:1.25.40.10 44 249 6.0E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 SMART SM00028 79 112 0.0072 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 SMART SM00028 113 146 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 SMART SM00028 149 182 0.043 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 SMART SM00028 45 78 0.76 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 SUPERFAMILY SSF48452 48 181 8.34E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 17 245 9.0E-76 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW VS_1678 517d04ad019ef18fe1b0374da7cdd36c 249 Pfam PF13424 Tetratricopeptide repeat 114 179 1.6E-9 T 14-10-2018 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 Gene3D G3DSA:1.20.120.640 306 461 1.7E-50 T 14-10-2018 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.7E-192 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 SUPERFAMILY SSF47323 316 460 2.88E-40 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 Pfam PF09190 DALR domain 341 402 3.5E-24 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 Gene3D G3DSA:3.40.50.620 1 305 3.1E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 SUPERFAMILY SSF52374 1 313 8.85E-104 T 14-10-2018 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.367 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 SMART SM00840 341 402 4.3E-27 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VS_2014 1b0007eb4fd6bdaa7cfe00b51e7645aa 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.3E-142 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VS_II1302 8f5ce4d83ef0e584e22be8976dca93d2 115 Pfam PF11777 Protein of unknown function (DUF3316) 2 109 9.3E-22 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VS_II1302 8f5ce4d83ef0e584e22be8976dca93d2 115 PIRSF PIRSF028299 1 114 1.2E-25 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VS_2941 529d2f9930be1d7524243aeb4316924c 210 SUPERFAMILY SSF53098 29 199 1.9E-31 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2941 529d2f9930be1d7524243aeb4316924c 210 Gene3D G3DSA:3.30.420.10 24 201 1.5E-32 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2941 529d2f9930be1d7524243aeb4316924c 210 Pfam PF00929 Exonuclease 31 194 2.9E-17 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_2941 529d2f9930be1d7524243aeb4316924c 210 SMART SM00479 29 203 2.0E-21 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_1197 98a811c4535c1d20428319a4e5fc40e3 431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 426 1.7E-39 T 14-10-2018 IPR000160 GGDEF domain VS_1197 98a811c4535c1d20428319a4e5fc40e3 431 SUPERFAMILY SSF55073 279 429 4.63E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1197 98a811c4535c1d20428319a4e5fc40e3 431 SMART SM00267 263 430 4.4E-47 T 14-10-2018 IPR000160 GGDEF domain VS_1197 98a811c4535c1d20428319a4e5fc40e3 431 Gene3D G3DSA:3.30.70.270 239 430 3.8E-48 T 14-10-2018 VS_1197 98a811c4535c1d20428319a4e5fc40e3 431 SUPERFAMILY SSF49785 40 210 5.19E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VS_1197 98a811c4535c1d20428319a4e5fc40e3 431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 429 1.7E-41 T 14-10-2018 IPR000160 GGDEF domain VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 SUPERFAMILY SSF56053 1 82 5.63E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 SUPERFAMILY SSF56053 83 177 8.51E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 Gene3D G3DSA:3.90.930.12 83 177 2.2E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 Gene3D G3DSA:3.90.930.12 1 82 1.5E-30 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.1E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.1E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.1E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.558 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.4E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 PIRSF PIRSF002162 1 177 1.2E-44 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 Pfam PF00347 Ribosomal protein L6 11 82 8.3E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2816 83a513d289b7050e84e8a81ae01e3c47 177 Pfam PF00347 Ribosomal protein L6 91 164 1.9E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 424 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 165 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 165 184 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 297 316 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 428 446 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 479 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 488 505 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 267 283 4.6E-65 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 51 577 2.3E-137 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 Gene3D G3DSA:3.60.20.40 407 585 4.4E-60 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 SUPERFAMILY SSF56235 42 584 1.31E-171 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_3081 6331a0c163a4cfb93284e351173ef48b 585 Gene3D G3DSA:1.10.246.130 283 406 1.0E-37 T 14-10-2018 VS_3081 6331a0c163a4cfb93284e351173ef48b 585 Pfam PF01019 Gamma-glutamyltranspeptidase 65 580 2.1E-159 T 14-10-2018 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 6.1E-77 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 Gene3D G3DSA:3.40.190.80 200 335 2.5E-60 T 14-10-2018 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 Gene3D G3DSA:3.30.540.10 4 198 2.1E-76 T 14-10-2018 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.6E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.6E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.6E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.6E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.6E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.6E-77 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PIRSF PIRSF000904 1 336 1.1E-125 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 SUPERFAMILY SSF56655 3 331 4.65E-113 T 14-10-2018 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.852 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2771 42c902c3881f8aad34337f82fd53b3dc 336 PIRSF PIRSF500210 1 336 2.1E-128 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SMART SM00091 131 198 4.6 T 14-10-2018 IPR000014 PAS domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SMART SM00091 8 74 1.2E-5 T 14-10-2018 IPR000014 PAS domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SUPERFAMILY SSF55073 258 412 3.22E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Gene3D G3DSA:3.30.450.20 4 128 3.4E-11 T 14-10-2018 VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 407 1.2E-36 T 14-10-2018 IPR000160 GGDEF domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Gene3D G3DSA:3.30.70.270 250 422 5.8E-49 T 14-10-2018 VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Pfam PF00563 EAL domain 427 661 1.7E-72 T 14-10-2018 IPR001633 EAL domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SUPERFAMILY SSF141868 427 674 1.44E-84 T 14-10-2018 IPR035919 EAL domain superfamily VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SUPERFAMILY SSF55785 118 189 1.1E-5 T 14-10-2018 IPR035965 PAS domain superfamily VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SUPERFAMILY SSF55785 5 115 1.12E-10 T 14-10-2018 IPR035965 PAS domain superfamily VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 118 5.0E-8 T 14-10-2018 IPR000014 PAS domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 2.2E-40 T 14-10-2018 IPR000160 GGDEF domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Pfam PF13188 PAS domain 134 179 3.5E-5 T 14-10-2018 IPR000014 PAS domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Gene3D G3DSA:3.30.450.20 129 236 2.7E-6 T 14-10-2018 VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SMART SM00052 420 666 5.9E-108 T 14-10-2018 IPR001633 EAL domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 SMART SM00267 236 410 4.0E-51 T 14-10-2018 IPR000160 GGDEF domain VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Pfam PF08448 PAS fold 16 118 3.2E-7 T 14-10-2018 IPR013656 PAS fold-4 VS_2472 135be9b4ee5203b07ed42e0bc7c7be7c 679 Gene3D G3DSA:3.20.20.450 423 676 9.7E-95 T 14-10-2018 IPR035919 EAL domain superfamily VS_II1256 ce9287b22ab18db34d7e7f8f6baf0d76 214 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 21 198 1.8E-32 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VS_II0336 bc3d90ab19fc61b07364f981de233bf4 219 Gene3D G3DSA:2.30.110.10 2 216 4.0E-59 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VS_II0336 bc3d90ab19fc61b07364f981de233bf4 219 SUPERFAMILY SSF50475 2 184 1.26E-51 T 14-10-2018 VS_II0336 bc3d90ab19fc61b07364f981de233bf4 219 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 21 162 1.5E-38 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related VS_2635 9ed5ddbfbe0d1d98236591d64b7b70fe 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 16 176 7.3E-10 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VS_2635 9ed5ddbfbe0d1d98236591d64b7b70fe 191 SUPERFAMILY SSF101327 7 178 4.84E-43 T 14-10-2018 IPR036255 YgfB-like superfamily VS_2635 9ed5ddbfbe0d1d98236591d64b7b70fe 191 Gene3D G3DSA:1.20.120.740 4 191 1.2E-46 T 14-10-2018 VS_2635 9ed5ddbfbe0d1d98236591d64b7b70fe 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 179 1.5E-34 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VS_2635 9ed5ddbfbe0d1d98236591d64b7b70fe 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 32.315 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 317 3.3E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 334 8.6E-105 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 Pfam PF04055 Radical SAM superfamily 24 186 5.5E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 Gene3D G3DSA:3.20.20.70 7 334 1.7E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 SMART SM00729 19 221 5.2E-6 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 SUPERFAMILY SSF102114 11 283 1.06E-69 T 14-10-2018 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 10 334 36.645 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0985 6b8ce861cc773fba8504531a91ad62e3 334 Pfam PF13353 4Fe-4S single cluster domain 28 130 1.2E-8 T 14-10-2018 VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 Gene3D G3DSA:2.160.10.10 1 196 2.0E-49 T 14-10-2018 VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 7.4E-96 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 Gene3D G3DSA:1.20.1180.10 197 262 3.1E-22 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 PIRSF PIRSF000456 4 262 1.6E-95 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.7E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 20 52 1.8E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.636 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 SUPERFAMILY SSF51161 1 262 1.9E-75 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_2340 5451e5e3f1d12b5b5caffb5b34d214b1 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 5.1E-27 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VS_2231 bb1493193b6cdeb0f97bfffa6bcab3ec 142 SUPERFAMILY SSF54197 3 133 2.02E-34 T 14-10-2018 IPR036265 HIT-like superfamily VS_2231 bb1493193b6cdeb0f97bfffa6bcab3ec 142 Gene3D G3DSA:3.30.428.10 1 142 2.4E-43 T 14-10-2018 IPR036265 HIT-like superfamily VS_2231 bb1493193b6cdeb0f97bfffa6bcab3ec 142 PIRSF PIRSF000714 2 140 1.8E-52 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VS_2231 bb1493193b6cdeb0f97bfffa6bcab3ec 142 Pfam PF01230 HIT domain 11 99 2.4E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VS_1220 0a34ccdaf730817c7e08a253037d1723 237 SUPERFAMILY SSF46785 2 73 5.03E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1220 0a34ccdaf730817c7e08a253037d1723 237 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 234 5.2E-91 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 VS_1220 0a34ccdaf730817c7e08a253037d1723 237 Pfam PF07702 UTRA domain 93 229 8.9E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VS_1220 0a34ccdaf730817c7e08a253037d1723 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1220 0a34ccdaf730817c7e08a253037d1723 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1220 0a34ccdaf730817c7e08a253037d1723 237 SMART SM00866 92 229 1.2E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VS_1220 0a34ccdaf730817c7e08a253037d1723 237 SMART SM00345 10 69 7.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1220 0a34ccdaf730817c7e08a253037d1723 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 1.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1220 0a34ccdaf730817c7e08a253037d1723 237 Gene3D G3DSA:1.10.10.10 2 70 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1220 0a34ccdaf730817c7e08a253037d1723 237 Gene3D G3DSA:3.40.1410.10 90 225 9.4E-32 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_1220 0a34ccdaf730817c7e08a253037d1723 237 SUPERFAMILY SSF64288 96 232 2.51E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_1414 9929aa0b5f25c1422159e939afd61b38 598 SMART SM00382 385 576 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1414 9929aa0b5f25c1422159e939afd61b38 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1414 9929aa0b5f25c1422159e939afd61b38 598 Gene3D G3DSA:3.40.50.300 352 598 2.3E-80 T 14-10-2018 VS_1414 9929aa0b5f25c1422159e939afd61b38 598 SUPERFAMILY SSF90123 12 345 1.22E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1414 9929aa0b5f25c1422159e939afd61b38 598 Gene3D G3DSA:1.20.1560.10 2 345 2.3E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1414 9929aa0b5f25c1422159e939afd61b38 598 Pfam PF00005 ABC transporter 376 524 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1414 9929aa0b5f25c1422159e939afd61b38 598 SUPERFAMILY SSF52540 356 592 1.46E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1414 9929aa0b5f25c1422159e939afd61b38 598 Pfam PF00664 ABC transporter transmembrane region 28 313 4.6E-29 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_1918 7ea2635b14cf9d3d1454be5b5683bdb5 206 Pfam PF05951 Bacterial protein of unknown function (DUF882) 58 206 2.9E-67 T 14-10-2018 IPR010275 Protein of unknown function DUF882 VS_1918 7ea2635b14cf9d3d1454be5b5683bdb5 206 SUPERFAMILY SSF55166 89 206 2.46E-34 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_1918 7ea2635b14cf9d3d1454be5b5683bdb5 206 Gene3D G3DSA:3.30.1380.10 93 206 1.1E-12 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_1353 8597be372a0bed8e83077147ff3bf8f1 222 PIRSF PIRSF000370 1 222 4.3E-68 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VS_1353 8597be372a0bed8e83077147ff3bf8f1 222 Pfam PF04055 Radical SAM superfamily 25 123 1.4E-7 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_1353 8597be372a0bed8e83077147ff3bf8f1 222 Gene3D G3DSA:3.20.20.70 1 222 2.8E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1353 8597be372a0bed8e83077147ff3bf8f1 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 8.0E-109 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VS_1353 8597be372a0bed8e83077147ff3bf8f1 222 SUPERFAMILY SSF102114 25 122 2.94E-6 T 14-10-2018 VS_1353 8597be372a0bed8e83077147ff3bf8f1 222 Pfam PF13394 4Fe-4S single cluster domain 23 132 9.4E-12 T 14-10-2018 VS_1353 8597be372a0bed8e83077147ff3bf8f1 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.379 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 SMART SM00052 403 635 1.6E-10 T 14-10-2018 IPR001633 EAL domain VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 SMART SM00267 226 390 2.3E-13 T 14-10-2018 IPR000160 GGDEF domain VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 386 1.1E-15 T 14-10-2018 IPR000160 GGDEF domain VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 SUPERFAMILY SSF55073 243 385 1.8E-16 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 Pfam PF00563 EAL domain 412 634 1.8E-33 T 14-10-2018 IPR001633 EAL domain VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 Gene3D G3DSA:3.30.1040.50 102 150 2.2E-16 T 14-10-2018 VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 386 1.4E-10 T 14-10-2018 IPR000160 GGDEF domain VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 Gene3D G3DSA:3.30.70.270 221 390 2.0E-21 T 14-10-2018 VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 Gene3D G3DSA:3.20.20.450 401 636 4.6E-36 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 SUPERFAMILY SSF141868 412 635 8.5E-38 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0006 7e0079da43ec1c3ef6dfe289c1f426db 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 1.5E-38 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain VS_2935 07fff6ebbf9906e2f8994aa9b5a4af7d 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 1.2E-261 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily VS_2935 07fff6ebbf9906e2f8994aa9b5a4af7d 567 Gene3D G3DSA:1.20.1730.10 351 557 9.1E-28 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VS_2935 07fff6ebbf9906e2f8994aa9b5a4af7d 567 Gene3D G3DSA:1.20.1730.10 21 327 5.6E-38 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VS_2935 07fff6ebbf9906e2f8994aa9b5a4af7d 567 Pfam PF00474 Sodium:solute symporter family 368 489 6.3E-19 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VS_2935 07fff6ebbf9906e2f8994aa9b5a4af7d 567 Pfam PF00474 Sodium:solute symporter family 33 298 1.7E-33 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VS_II1360 abc2eb6db72c90e909848b0b41e86c92 297 Pfam PF00892 EamA-like transporter family 3 127 2.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1360 abc2eb6db72c90e909848b0b41e86c92 297 Pfam PF00892 EamA-like transporter family 141 271 5.8E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1360 abc2eb6db72c90e909848b0b41e86c92 297 SUPERFAMILY SSF103481 201 268 6.54E-6 T 14-10-2018 VS_II1360 abc2eb6db72c90e909848b0b41e86c92 297 SUPERFAMILY SSF103481 40 129 5.89E-5 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 5.5E-8 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 5.5E-8 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.5E-8 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 Gene3D G3DSA:3.50.50.100 1 405 8.7E-114 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 SUPERFAMILY SSF51905 3 347 3.28E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.0E-14 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 5.0E-14 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.0E-14 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.0E-14 T 14-10-2018 VS_2072 87554a85a269cc4e13b03482a7d61b5c 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.3E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_II1218 173e0db1b6065e2c262e46c11d4eb1d9 257 Pfam PF03734 L,D-transpeptidase catalytic domain 122 255 4.1E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VS_II1218 173e0db1b6065e2c262e46c11d4eb1d9 257 SUPERFAMILY SSF141523 121 255 9.68E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VS_II1218 173e0db1b6065e2c262e46c11d4eb1d9 257 Gene3D G3DSA:2.40.440.10 116 255 7.5E-17 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VS_2413 a17623d33fbabdf8cd836c1030d36654 374 Gene3D G3DSA:3.40.140.10 3 141 1.8E-42 T 14-10-2018 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 105 1.1E-18 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VS_2413 a17623d33fbabdf8cd836c1030d36654 374 Pfam PF01872 RibD C-terminal domain 153 358 5.5E-50 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 359 5.5E-128 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 363 4.2E-58 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 SUPERFAMILY SSF53597 150 361 1.68E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 PIRSF PIRSF006769 4 365 1.5E-121 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 SUPERFAMILY SSF53927 8 151 2.51E-44 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_2413 a17623d33fbabdf8cd836c1030d36654 374 Gene3D G3DSA:3.40.430.10 143 369 5.9E-66 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_2333 f439dcb007776789f1204af2143382cb 114 Gene3D G3DSA:3.30.70.120 1 114 4.3E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VS_2333 f439dcb007776789f1204af2143382cb 114 PIRSF PIRSF039144 3 114 3.3E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 SUPERFAMILY SSF54913 3 114 4.45E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VS_2333 f439dcb007776789f1204af2143382cb 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 PRINTS PR00340 P-II protein signature 54 77 1.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 PRINTS PR00340 P-II protein signature 25 43 1.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 PRINTS PR00340 P-II protein signature 85 105 1.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 PRINTS PR00340 P-II protein signature 4 19 1.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 SMART SM00938 6 107 2.7E-69 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2333 f439dcb007776789f1204af2143382cb 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 4.3E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Gene3D G3DSA:1.20.1480.50 337 424 2.5E-9 T 14-10-2018 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Gene3D G3DSA:3.30.450.20 150 218 3.3E-16 T 14-10-2018 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Gene3D G3DSA:3.30.450.20 219 335 3.3E-16 T 14-10-2018 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 574 2.8E-27 T 14-10-2018 IPR000160 GGDEF domain VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 SMART SM00304 367 420 2.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Pfam PF02743 Cache domain 57 318 1.7E-19 T 14-10-2018 IPR033479 Double Cache domain 1 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 422 576 3.9E-22 T 14-10-2018 IPR000160 GGDEF domain VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Gene3D G3DSA:3.30.70.270 425 592 3.0E-33 T 14-10-2018 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Gene3D G3DSA:3.20.20.450 593 853 4.3E-89 T 14-10-2018 IPR035919 EAL domain superfamily VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 Pfam PF00563 EAL domain 597 832 1.3E-71 T 14-10-2018 IPR001633 EAL domain VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 SUPERFAMILY SSF141868 597 842 1.7E-81 T 14-10-2018 IPR035919 EAL domain superfamily VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 SUPERFAMILY SSF158472 368 417 2.62E-8 T 14-10-2018 VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 SMART SM00052 590 837 1.1E-99 T 14-10-2018 IPR001633 EAL domain VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 SMART SM00267 415 580 6.1E-30 T 14-10-2018 IPR000160 GGDEF domain VS_0117 6bd7ac857e4ce47a8ba592abdf8ad8fb 857 SUPERFAMILY SSF55073 431 575 1.1E-29 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1921 07dd9d17b819edbd98f84a00bf9837bc 353 Pfam PF09375 Imelysin 58 331 7.2E-35 T 14-10-2018 IPR018976 Imelysin-like domain VS_1921 07dd9d17b819edbd98f84a00bf9837bc 353 Gene3D G3DSA:1.20.1420.20 36 353 1.1E-65 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VS_II1160 c51803a3e623619c6d7d8a449dc8198e 207 Gene3D G3DSA:3.30.420.10 3 176 1.0E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_II1160 c51803a3e623619c6d7d8a449dc8198e 207 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 189 1.2E-26 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_II1160 c51803a3e623619c6d7d8a449dc8198e 207 Pfam PF00929 Exonuclease 10 165 5.9E-28 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_II1160 c51803a3e623619c6d7d8a449dc8198e 207 SMART SM00479 8 175 1.5E-34 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_II1160 c51803a3e623619c6d7d8a449dc8198e 207 SUPERFAMILY SSF53098 5 180 4.01E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1280 88238f8e90c47bbf02b142a40fafac61 168 Pfam PF13420 Acetyltransferase (GNAT) domain 3 158 1.7E-22 T 14-10-2018 VS_1280 88238f8e90c47bbf02b142a40fafac61 168 Gene3D G3DSA:3.40.630.30 2 167 3.1E-41 T 14-10-2018 VS_1280 88238f8e90c47bbf02b142a40fafac61 168 SUPERFAMILY SSF55729 1 163 1.51E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1132 52585ba21fd20b34fa287b49ea72d92c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1132 52585ba21fd20b34fa287b49ea72d92c 308 Gene3D G3DSA:1.10.10.10 4 92 5.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1132 52585ba21fd20b34fa287b49ea72d92c 308 Gene3D G3DSA:3.40.190.290 94 304 2.8E-31 T 14-10-2018 VS_1132 52585ba21fd20b34fa287b49ea72d92c 308 Pfam PF03466 LysR substrate binding domain 92 297 1.8E-36 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1132 52585ba21fd20b34fa287b49ea72d92c 308 SUPERFAMILY SSF46785 3 104 5.22E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1132 52585ba21fd20b34fa287b49ea72d92c 308 SUPERFAMILY SSF53850 94 299 3.26E-34 T 14-10-2018 VS_II0018 4312721627d743dda789c9f36bd26a23 274 SUPERFAMILY SSF46689 172 218 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0018 4312721627d743dda789c9f36bd26a23 274 SUPERFAMILY SSF51182 29 95 6.23E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II0018 4312721627d743dda789c9f36bd26a23 274 SUPERFAMILY SSF46689 222 270 6.72E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0018 4312721627d743dda789c9f36bd26a23 274 Gene3D G3DSA:1.10.10.60 170 272 1.6E-27 T 14-10-2018 VS_II0018 4312721627d743dda789c9f36bd26a23 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 8.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0018 4312721627d743dda789c9f36bd26a23 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 8.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0018 4312721627d743dda789c9f36bd26a23 274 SMART SM00342 185 268 2.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0018 4312721627d743dda789c9f36bd26a23 274 Pfam PF12833 Helix-turn-helix domain 191 269 3.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0018 4312721627d743dda789c9f36bd26a23 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_1130 8b8f93d674b54f1155b4b3e90e5ac7e2 149 Pfam PF06610 L-alanine exporter 8 142 1.4E-67 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VS_1130 8b8f93d674b54f1155b4b3e90e5ac7e2 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 2.0E-62 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VS_1130 8b8f93d674b54f1155b4b3e90e5ac7e2 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.082 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 333 347 6.1E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 459 471 6.1E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 425 6.1E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 452 6.1E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 402 6.1E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 61 75 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 TIGRFAM TIGR03356 BGL: beta-galactosidase 58 481 1.0E-183 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 Pfam PF00232 Glycosyl hydrolase family 1 59 485 1.1E-152 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 Gene3D G3DSA:3.20.20.80 51 493 8.1E-166 T 14-10-2018 VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 394 402 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site VS_II1388 3a50d8cb53efeca7f7e1cc28f892d8ca 493 SUPERFAMILY SSF51445 59 485 3.19E-156 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_2484 67c126ea2ce05688462db814cff5df06 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 23.835 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VS_2484 67c126ea2ce05688462db814cff5df06 151 Gene3D G3DSA:3.30.300.70 1 80 5.0E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VS_2484 67c126ea2ce05688462db814cff5df06 151 Pfam PF02576 RimP N-terminal domain 13 83 1.6E-28 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VS_2484 67c126ea2ce05688462db814cff5df06 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 5.4E-20 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VS_2484 67c126ea2ce05688462db814cff5df06 151 SUPERFAMILY SSF75420 2 83 4.58E-25 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VS_2484 67c126ea2ce05688462db814cff5df06 151 SUPERFAMILY SSF74942 84 151 1.83E-16 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VS_II0877 e58248f473365a81012226797a1e0ef5 327 Gene3D G3DSA:3.40.50.300 1 209 1.9E-52 T 14-10-2018 VS_II0877 e58248f473365a81012226797a1e0ef5 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 7.0E-61 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VS_II0877 e58248f473365a81012226797a1e0ef5 327 PIRSF PIRSF002849 1 327 2.2E-126 T 14-10-2018 VS_II0877 e58248f473365a81012226797a1e0ef5 327 Gene3D G3DSA:1.10.8.300 210 324 1.0E-33 T 14-10-2018 VS_II0877 e58248f473365a81012226797a1e0ef5 327 SUPERFAMILY SSF52540 5 301 9.08E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0391 646018a74db7b25a0a328c8bc5c6009d 218 Gene3D G3DSA:3.40.50.720 1 138 2.2E-33 T 14-10-2018 VS_II0391 646018a74db7b25a0a328c8bc5c6009d 218 SUPERFAMILY SSF116726 133 214 1.44E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_II0391 646018a74db7b25a0a328c8bc5c6009d 218 Gene3D G3DSA:3.30.70.1450 139 214 4.3E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_II0391 646018a74db7b25a0a328c8bc5c6009d 218 Pfam PF02254 TrkA-N domain 6 121 2.3E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VS_II0391 646018a74db7b25a0a328c8bc5c6009d 218 Pfam PF02080 TrkA-C domain 152 213 4.2E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_II0391 646018a74db7b25a0a328c8bc5c6009d 218 SUPERFAMILY SSF51735 4 134 1.42E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.46 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 Gene3D G3DSA:3.40.1500.10 1 305 3.8E-135 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 PIRSF PIRSF000166 2 305 1.9E-126 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 1.0E-129 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 SUPERFAMILY SSF102886 5 305 1.16E-136 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 PRINTS PR00073 Coprogen oxidase signature 266 292 3.5E-68 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 PRINTS PR00073 Coprogen oxidase signature 238 265 3.5E-68 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 PRINTS PR00073 Coprogen oxidase signature 129 151 3.5E-68 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 PRINTS PR00073 Coprogen oxidase signature 166 195 3.5E-68 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 PRINTS PR00073 Coprogen oxidase signature 31 47 3.5E-68 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_3118 3bc00c330ee79757e8d2959c792e0a43 305 PRINTS PR00073 Coprogen oxidase signature 94 118 3.5E-68 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VS_II0122 5eb7710fc397786cb41b2f32fe004e7d 215 Gene3D G3DSA:3.40.30.10 1 211 2.3E-63 T 14-10-2018 VS_II0122 5eb7710fc397786cb41b2f32fe004e7d 215 Pfam PF01323 DSBA-like thioredoxin domain 7 209 9.5E-31 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VS_II0122 5eb7710fc397786cb41b2f32fe004e7d 215 SUPERFAMILY SSF52833 3 214 8.57E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 SUPERFAMILY SSF51011 386 454 1.28E-6 T 14-10-2018 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 SMART SM00642 8 378 2.1E-26 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 Pfam PF00128 Alpha amylase, catalytic domain 28 242 1.6E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 Gene3D G3DSA:3.20.20.80 5 383 1.2E-74 T 14-10-2018 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 SUPERFAMILY SSF51445 7 380 1.2E-59 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 PRINTS PR00110 Alpha-amylase signature 59 76 4.8E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 PRINTS PR00110 Alpha-amylase signature 205 216 4.8E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 PRINTS PR00110 Alpha-amylase signature 234 252 4.8E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 PRINTS PR00110 Alpha-amylase signature 92 103 4.8E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VS_II0295 6008ab0a4fc5dbd6cf2468ff8cacd685 456 PRINTS PR00110 Alpha-amylase signature 300 312 4.8E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VS_0015 094f757d63a99924c166bf64656b1d45 417 Pfam PF00155 Aminotransferase class I and II 67 400 1.8E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_0015 094f757d63a99924c166bf64656b1d45 417 Gene3D G3DSA:3.40.640.10 1 416 1.1E-147 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_0015 094f757d63a99924c166bf64656b1d45 417 SUPERFAMILY SSF53383 13 411 9.04E-62 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 SMART SM00411 8 97 2.1E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 53 72 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 SUPERFAMILY SSF47729 8 97 2.94E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 Gene3D G3DSA:4.10.520.10 8 97 1.8E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 Pfam PF00216 Bacterial DNA-binding protein 8 97 9.4E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 1.7E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 1.7E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2201 b7c8a372ff138cd92c6e6f141b2ac1d3 97 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 1.7E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2543 80d4004d17b1280b19a830bac5a210ed 268 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 89 4.2E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_2543 80d4004d17b1280b19a830bac5a210ed 268 Pfam PF07729 FCD domain 114 241 1.3E-18 T 14-10-2018 IPR011711 GntR, C-terminal VS_2543 80d4004d17b1280b19a830bac5a210ed 268 SUPERFAMILY SSF48008 113 250 2.41E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_2543 80d4004d17b1280b19a830bac5a210ed 268 SMART SM00895 114 242 8.1E-19 T 14-10-2018 IPR011711 GntR, C-terminal VS_2543 80d4004d17b1280b19a830bac5a210ed 268 Gene3D G3DSA:1.10.10.10 14 89 1.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2543 80d4004d17b1280b19a830bac5a210ed 268 SMART SM00345 30 89 9.9E-28 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_2543 80d4004d17b1280b19a830bac5a210ed 268 SUPERFAMILY SSF46785 20 91 2.96E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2543 80d4004d17b1280b19a830bac5a210ed 268 Gene3D G3DSA:1.20.120.530 112 251 2.6E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_2543 80d4004d17b1280b19a830bac5a210ed 268 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 2.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_2543 80d4004d17b1280b19a830bac5a210ed 268 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 2.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_2258 46ab355ab8ca8dfd78e528add2771d13 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2258 46ab355ab8ca8dfd78e528add2771d13 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.5E-46 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VS_2258 46ab355ab8ca8dfd78e528add2771d13 149 SUPERFAMILY SSF46785 5 131 6.82E-42 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2258 46ab355ab8ca8dfd78e528add2771d13 149 Gene3D G3DSA:3.30.1490.190 85 141 2.5E-21 T 14-10-2018 VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 Gene3D G3DSA:1.10.10.60 174 279 2.3E-25 T 14-10-2018 VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 Gene3D G3DSA:2.60.120.280 23 141 7.7E-9 T 14-10-2018 VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 Pfam PF02311 AraC-like ligand binding domain 48 109 1.5E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 SUPERFAMILY SSF46689 177 226 5.38E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 SUPERFAMILY SSF51215 29 149 2.75E-18 T 14-10-2018 IPR037923 Transcription regulator HTH-like VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 Pfam PF12833 Helix-turn-helix domain 198 276 7.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 SUPERFAMILY SSF46689 228 277 2.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0714 cadd4caddf66c2ee50c0abdb45833b1d 279 SMART SM00342 192 275 9.7E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_2010 d73544a4b38aecae8503c5b994a427b1 76 Pfam PF06146 Phosphate-starvation-inducible E 9 66 8.5E-8 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VS_2010 d73544a4b38aecae8503c5b994a427b1 76 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 75 1.9E-35 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 VS_0171 c0a0ad1de6736fd846806a2e347602e8 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 361 5.1E-106 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VS_0171 c0a0ad1de6736fd846806a2e347602e8 386 Gene3D G3DSA:1.20.1090.10 194 383 3.2E-47 T 14-10-2018 VS_0171 c0a0ad1de6736fd846806a2e347602e8 386 Gene3D G3DSA:3.40.50.1970 1 193 1.0E-53 T 14-10-2018 VS_0171 c0a0ad1de6736fd846806a2e347602e8 386 SUPERFAMILY SSF56796 3 361 2.36E-100 T 14-10-2018 VS_0171 c0a0ad1de6736fd846806a2e347602e8 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 182 210 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 SMART SM00382 105 253 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 SUPERFAMILY SSF52540 48 359 4.51E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 Gene3D G3DSA:3.40.50.300 96 291 1.5E-121 T 14-10-2018 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 SMART SM00963 7 92 8.2E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 Gene3D G3DSA:1.10.260.30 334 459 1.0E-44 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 275 288 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 11 445 34.102 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 Pfam PF02881 SRP54-type protein, helical bundle domain 11 88 9.7E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 SMART SM00962 106 302 2.4E-113 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 SUPERFAMILY SSF47446 335 436 8.99E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 Gene3D G3DSA:1.20.120.140 10 311 1.5E-121 T 14-10-2018 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 Pfam PF00448 SRP54-type protein, GTPase domain 106 302 9.0E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 Pfam PF02978 Signal peptide binding domain 335 433 2.7E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VS_2559 7f9a7ae30956b328bc7ae9c843c7e62b 470 TIGRFAM TIGR00959 ffh: signal recognition particle protein 8 435 1.7E-177 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Gene3D G3DSA:3.30.310.50 371 446 1.9E-24 T 14-10-2018 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.2E-202 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 8.5E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Gene3D G3DSA:3.40.120.10 258 340 3.8E-61 T 14-10-2018 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 6.0E-13 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 4.6E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 4.6E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 4.6E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 2.0E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Gene3D G3DSA:3.40.120.10 175 363 3.8E-61 T 14-10-2018 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 SUPERFAMILY SSF53738 157 257 6.67E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Gene3D G3DSA:3.40.120.10 4 155 6.0E-49 T 14-10-2018 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 SUPERFAMILY SSF53738 259 366 1.49E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 SUPERFAMILY SSF53738 4 182 1.88E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.8 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 8.9E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2488 352ded0d82e3592544ed4da375ddcda2 446 SUPERFAMILY SSF55957 358 444 3.79E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0867 eef2933a9551010eb124b85d1daa19f4 352 SUPERFAMILY SSF48452 176 310 5.06E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0867 eef2933a9551010eb124b85d1daa19f4 352 Gene3D G3DSA:1.25.40.10 170 337 1.9E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0867 eef2933a9551010eb124b85d1daa19f4 352 Pfam PF13432 Tetratricopeptide repeat 180 240 4.2E-4 T 14-10-2018 VS_II0867 eef2933a9551010eb124b85d1daa19f4 352 SUPERFAMILY SSF48371 55 184 8.23E-6 T 14-10-2018 IPR016024 Armadillo-type fold VS_II0867 eef2933a9551010eb124b85d1daa19f4 352 Gene3D G3DSA:1.25.10.10 38 169 2.0E-5 T 14-10-2018 IPR011989 Armadillo-like helical VS_II0410 e472165012b9d454e933e82032fe2892 243 Pfam PF03575 Peptidase family S51 4 208 9.9E-49 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 VS_II0410 e472165012b9d454e933e82032fe2892 243 SUPERFAMILY SSF52317 5 209 3.44E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_II0410 e472165012b9d454e933e82032fe2892 243 Gene3D G3DSA:3.40.50.880 1 234 5.8E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_1783 8626cebecb2e2ffc191ca87760550cba 118 Gene3D G3DSA:3.30.70.100 21 118 2.4E-31 T 14-10-2018 VS_1783 8626cebecb2e2ffc191ca87760550cba 118 SUPERFAMILY SSF54909 22 116 3.47E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_1783 8626cebecb2e2ffc191ca87760550cba 118 Pfam PF03992 Antibiotic biosynthesis monooxygenase 24 89 4.2E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 SUPERFAMILY SSF69279 56 193 1.31E-5 T 14-10-2018 VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 SUPERFAMILY SSF69255 199 285 1.39E-28 T 14-10-2018 VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 SUPERFAMILY SSF69349 275 417 3.92E-24 T 14-10-2018 VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 Gene3D G3DSA:3.30.1920.30 65 131 3.3E-14 T 14-10-2018 VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 Gene3D G3DSA:2.40.50.230 192 290 9.3E-38 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 Gene3D G3DSA:2.30.110.50 34 173 3.3E-14 T 14-10-2018 VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 13 348 1.3E-83 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 14 332 1.0E-59 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 Gene3D G3DSA:3.55.50.10 14 33 3.3E-14 T 14-10-2018 VS_1337 87a22e51d6c8cf6d08a8ef7f7aebcad7 499 Pfam PF05954 Phage late control gene D protein (GPD) 15 168 6.6E-13 T 14-10-2018 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 Pfam PF00889 Elongation factor TS 71 261 3.6E-60 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 Gene3D G3DSA:1.10.8.10 1 56 2.2E-24 T 14-10-2018 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 SUPERFAMILY SSF46934 4 54 1.22E-16 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 75.473 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 2.5E-99 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 SUPERFAMILY SSF54713 56 138 1.33E-17 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 Gene3D G3DSA:1.10.286.20 185 224 1.6E-21 T 14-10-2018 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 SUPERFAMILY SSF54713 142 280 1.57E-45 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VS_2352 9ef621744237aa77f1fef0c29ba4cd7f 281 Gene3D G3DSA:3.30.479.20 57 140 1.2E-24 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VS_3100 63911bbe9b3fe396f0ce18e5dba70cf2 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 11 129 18.301 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VS_3100 63911bbe9b3fe396f0ce18e5dba70cf2 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 13 124 2.3E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VS_3100 63911bbe9b3fe396f0ce18e5dba70cf2 131 TIGRFAM TIGR00494 crcB: protein CrcB 14 127 4.5E-30 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VS_1902 8638f2ac52fb1970191392ef374a5167 530 SUPERFAMILY SSF101960 78 527 6.41E-131 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily VS_1902 8638f2ac52fb1970191392ef374a5167 530 Pfam PF01458 Uncharacterized protein family (UPF0051) 268 501 3.6E-66 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 VS_1902 8638f2ac52fb1970191392ef374a5167 530 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 58 521 1.3E-192 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 VS_II1351 10de349626c6703caf0a410427a9da64 208 Pfam PF01966 HD domain 25 127 9.6E-10 T 14-10-2018 IPR006674 HD domain VS_II1351 10de349626c6703caf0a410427a9da64 208 Gene3D G3DSA:1.10.3210.50 2 208 1.1E-70 T 14-10-2018 VS_II1351 10de349626c6703caf0a410427a9da64 208 SMART SM00471 20 137 8.3E-7 T 14-10-2018 IPR003607 HD/PDEase domain VS_II1351 10de349626c6703caf0a410427a9da64 208 SUPERFAMILY SSF109604 11 208 4.08E-60 T 14-10-2018 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 Gene3D G3DSA:3.90.228.20 235 525 1.4E-234 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 Gene3D G3DSA:2.170.8.10 49 350 1.4E-234 T 14-10-2018 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 SUPERFAMILY SSF68923 11 227 1.19E-87 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 490 4.4E-209 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 538 54.577 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 Gene3D G3DSA:3.40.449.10 26 234 1.4E-234 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 PIRSF PIRSF006294 4 540 7.5E-225 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 SUPERFAMILY SSF53795 229 540 5.26E-126 T 14-10-2018 VS_0131 3f05ffde2702643118e9b72236e5dcb5 541 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 540 1.1E-275 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VS_0349 6dba8c94c6a305f35a6d739ceb8ee600 472 Gene3D G3DSA:3.40.50.300 259 471 2.6E-65 T 14-10-2018 VS_0349 6dba8c94c6a305f35a6d739ceb8ee600 472 Pfam PF13638 PIN domain 22 164 3.1E-35 T 14-10-2018 IPR002716 PIN domain VS_0349 6dba8c94c6a305f35a6d739ceb8ee600 472 SUPERFAMILY SSF88723 20 175 4.51E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily VS_0349 6dba8c94c6a305f35a6d739ceb8ee600 472 SUPERFAMILY SSF52540 261 451 3.13E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0349 6dba8c94c6a305f35a6d739ceb8ee600 472 Pfam PF02562 PhoH-like protein 262 467 2.0E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VS_0349 6dba8c94c6a305f35a6d739ceb8ee600 472 SMART SM00670 20 155 1.8E-11 T 14-10-2018 IPR002716 PIN domain VS_0349 6dba8c94c6a305f35a6d739ceb8ee600 472 Gene3D G3DSA:3.40.50.1010 16 169 6.5E-28 T 14-10-2018 VS_II1209 6d29389f7df735ace3003c65ec5ed3ed 264 Gene3D G3DSA:3.60.15.10 1 230 2.9E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_II1209 6d29389f7df735ace3003c65ec5ed3ed 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 199 9.3E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_II1209 6d29389f7df735ace3003c65ec5ed3ed 264 SMART SM00849 12 211 2.9E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_II1209 6d29389f7df735ace3003c65ec5ed3ed 264 SUPERFAMILY SSF56281 15 244 8.26E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_2821 fa365190416822a887594aeca4516807 98 SMART SM01374 2 98 2.8E-53 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VS_2821 fa365190416822a887594aeca4516807 98 Gene3D G3DSA:2.40.150.20 2 98 3.1E-41 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VS_2821 fa365190416822a887594aeca4516807 98 Pfam PF00238 Ribosomal protein L14p/L23e 4 98 7.0E-40 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VS_2821 fa365190416822a887594aeca4516807 98 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 2 98 17.249 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VS_2821 fa365190416822a887594aeca4516807 98 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 4 98 9.6E-44 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VS_2821 fa365190416822a887594aeca4516807 98 ProSitePatterns PS00049 Ribosomal protein L14 signature. 35 61 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2821 fa365190416822a887594aeca4516807 98 SUPERFAMILY SSF50193 4 97 3.01E-38 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VS_II0885 55a062dfb6d865dd58e47bc91066a008 104 Pfam PF07883 Cupin domain 43 101 1.8E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VS_II0885 55a062dfb6d865dd58e47bc91066a008 104 Gene3D G3DSA:2.60.120.10 14 104 6.6E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II0885 55a062dfb6d865dd58e47bc91066a008 104 SUPERFAMILY SSF51182 2 103 3.99E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_2053 d59e82d5ba091cca167d073dabe735e5 231 Gene3D G3DSA:3.20.20.70 1 229 8.3E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2053 d59e82d5ba091cca167d073dabe735e5 231 SMART SM00934 5 226 4.4E-100 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2053 d59e82d5ba091cca167d073dabe735e5 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.4E-50 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2053 d59e82d5ba091cca167d073dabe735e5 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 39.952 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2053 d59e82d5ba091cca167d073dabe735e5 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2053 d59e82d5ba091cca167d073dabe735e5 231 SUPERFAMILY SSF51366 3 227 2.09E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_2053 d59e82d5ba091cca167d073dabe735e5 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 226 1.8E-58 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 39.047 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.4E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.9E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 Gene3D G3DSA:3.40.50.1370 135 292 2.9E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 Gene3D G3DSA:3.40.50.1370 8 304 2.9E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 6.5E-118 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.9E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 SUPERFAMILY SSF53671 4 307 2.36E-103 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2927 2b2ef2274e7b4212dfb538280f49e8e4 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 6.0E-34 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Gene3D G3DSA:3.30.54.20 144 201 3.6E-64 T 14-10-2018 VS_1228 92a95845f78e1b7895a7768f6c972302 655 SUPERFAMILY SSF52954 543 650 2.11E-31 T 14-10-2018 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 332 543 8.3E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Pfam PF03129 Anticodon binding domain 555 644 2.8E-22 T 14-10-2018 IPR004154 Anticodon-binding VS_1228 92a95845f78e1b7895a7768f6c972302 655 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 186 233 3.2E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VS_1228 92a95845f78e1b7895a7768f6c972302 655 SMART SM00863 184 233 1.5E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Gene3D G3DSA:3.30.930.10 237 545 5.2E-131 T 14-10-2018 VS_1228 92a95845f78e1b7895a7768f6c972302 655 SUPERFAMILY SSF81271 16 74 8.17E-16 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 86 645 4.9E-242 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 80 648 34.171 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Gene3D G3DSA:3.30.980.10 83 236 3.6E-64 T 14-10-2018 VS_1228 92a95845f78e1b7895a7768f6c972302 655 SUPERFAMILY SSF55186 78 255 1.96E-63 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Gene3D G3DSA:3.40.50.800 546 655 8.7E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VS_1228 92a95845f78e1b7895a7768f6c972302 655 Pfam PF02824 TGS domain 17 74 7.1E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 Gene3D G3DSA:3.10.20.30 16 75 1.4E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_1228 92a95845f78e1b7895a7768f6c972302 655 PRINTS PR01047 Threonyl-tRNA synthetase signature 478 506 9.9E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 PRINTS PR01047 Threonyl-tRNA synthetase signature 548 560 9.9E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 PRINTS PR01047 Threonyl-tRNA synthetase signature 343 371 9.9E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 PRINTS PR01047 Threonyl-tRNA synthetase signature 376 399 9.9E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 PRINTS PR01047 Threonyl-tRNA synthetase signature 521 534 9.9E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VS_1228 92a95845f78e1b7895a7768f6c972302 655 SUPERFAMILY SSF55681 257 540 7.76E-99 T 14-10-2018 VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 Pfam PF00990 Diguanylate cyclase, GGDEF domain 342 501 1.6E-20 T 14-10-2018 IPR000160 GGDEF domain VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 SMART SM00052 520 766 6.4E-74 T 14-10-2018 IPR001633 EAL domain VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 SUPERFAMILY SSF141868 525 776 8.5E-72 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 SMART SM00267 332 511 2.6E-7 T 14-10-2018 IPR000160 GGDEF domain VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 Gene3D G3DSA:3.20.20.450 521 778 2.9E-74 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 Gene3D G3DSA:3.30.70.270 336 520 5.3E-25 T 14-10-2018 VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 SUPERFAMILY SSF55073 347 503 5.26E-19 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 339 504 1.4E-16 T 14-10-2018 IPR000160 GGDEF domain VS_II0890 7790b5da8a8d9e5fab0b1e7c59fc46f7 801 Pfam PF00563 EAL domain 527 761 2.6E-61 T 14-10-2018 IPR001633 EAL domain VS_0857 b70644c9e9e1c50583f05a969e3b7b8f 162 Pfam PF03918 Cytochrome C biogenesis protein 11 153 2.6E-51 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VS_0857 b70644c9e9e1c50583f05a969e3b7b8f 162 Gene3D G3DSA:1.10.8.640 22 107 8.0E-34 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VS_0459 2b27d2d92c6d0cb2f4f482a0524926e8 132 Pfam PF00293 NUDIX domain 5 126 1.0E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_0459 2b27d2d92c6d0cb2f4f482a0524926e8 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 3.5E-42 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VS_0459 2b27d2d92c6d0cb2f4f482a0524926e8 132 Gene3D G3DSA:3.90.79.10 1 132 4.4E-42 T 14-10-2018 VS_0459 2b27d2d92c6d0cb2f4f482a0524926e8 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_0459 2b27d2d92c6d0cb2f4f482a0524926e8 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.5E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_0459 2b27d2d92c6d0cb2f4f482a0524926e8 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.5E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_0459 2b27d2d92c6d0cb2f4f482a0524926e8 132 SUPERFAMILY SSF55811 1 128 1.9E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 SUPERFAMILY SSF50447 259 390 1.57E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 524 52.067 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 526 3.3E-301 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 PRINTS PR00315 GTP-binding elongation factor signature 62 70 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 PRINTS PR00315 GTP-binding elongation factor signature 134 143 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 PRINTS PR00315 GTP-binding elongation factor signature 82 92 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 3.6E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 Pfam PF00009 Elongation factor Tu GTP binding domain 10 274 8.7E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 145 5.2E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 Pfam PF03144 Elongation factor Tu domain 2 311 377 2.1E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 SUPERFAMILY SSF52540 7 274 4.36E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 Gene3D G3DSA:3.40.50.300 107 272 2.5E-115 T 14-10-2018 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 SUPERFAMILY SSF54980 390 465 1.01E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 Gene3D G3DSA:3.40.50.300 69 376 2.5E-115 T 14-10-2018 VS_2467 bf4fa155a1416dbe05cda42e4b20154a 526 Gene3D G3DSA:3.30.70.3280 387 526 6.0E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VS_2016 c9b306cd326196c18fb0a8fa6b709ee9 244 SUPERFAMILY SSF56300 1 223 3.65E-30 T 14-10-2018 VS_2016 c9b306cd326196c18fb0a8fa6b709ee9 244 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 229 3.9E-103 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VS_2016 c9b306cd326196c18fb0a8fa6b709ee9 244 Gene3D G3DSA:3.60.21.10 1 239 3.6E-17 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_2016 c9b306cd326196c18fb0a8fa6b709ee9 244 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 2.6E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VS_2016 c9b306cd326196c18fb0a8fa6b709ee9 244 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 114.839 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 Gene3D G3DSA:3.30.450.20 124 246 5.8E-9 T 14-10-2018 VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 SUPERFAMILY SSF55785 26 129 7.21E-6 T 14-10-2018 IPR035965 PAS domain superfamily VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 SUPERFAMILY SSF55073 265 430 1.46E-32 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 SUPERFAMILY SSF55785 120 247 1.07E-10 T 14-10-2018 IPR035965 PAS domain superfamily VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 Pfam PF13188 PAS domain 136 180 0.0032 T 14-10-2018 IPR000014 PAS domain VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 SMART SM00091 135 202 0.033 T 14-10-2018 IPR000014 PAS domain VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 SMART SM00091 10 77 7.4 T 14-10-2018 IPR000014 PAS domain VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 427 1.2E-32 T 14-10-2018 IPR000160 GGDEF domain VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 431 2.1E-35 T 14-10-2018 IPR000160 GGDEF domain VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 Gene3D G3DSA:3.30.70.270 251 432 1.1E-41 T 14-10-2018 VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 SMART SM00267 249 431 7.0E-38 T 14-10-2018 IPR000160 GGDEF domain VS_1631 6aaa955099c53cc54d752b9fbbd313f5 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 256 4.6E-11 T 14-10-2018 IPR000014 PAS domain VS_1274 0fc04f3736b30c410a090231e3942eda 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 7.1E-80 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VS_1274 0fc04f3736b30c410a090231e3942eda 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 462 1.8E-50 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VS_1274 0fc04f3736b30c410a090231e3942eda 472 PIRSF PIRSF002457 1 472 6.0E-116 T 14-10-2018 IPR030676 Citrate carrier CitT-related VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 Gene3D G3DSA:3.30.830.10 510 720 1.7E-18 T 14-10-2018 VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 Gene3D G3DSA:3.30.830.10 31 253 1.4E-59 T 14-10-2018 VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 SUPERFAMILY SSF63411 504 723 6.29E-28 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 Pfam PF00675 Insulinase (Peptidase family M16) 51 164 2.5E-27 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 Pfam PF05193 Peptidase M16 inactive domain 673 857 6.9E-15 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 Pfam PF05193 Peptidase M16 inactive domain 203 371 1.8E-10 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 Gene3D G3DSA:3.30.830.10 748 919 1.0E-14 T 14-10-2018 VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 Gene3D G3DSA:3.30.830.10 264 474 2.0E-6 T 14-10-2018 VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 SUPERFAMILY SSF63411 24 252 1.63E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 SUPERFAMILY SSF63411 772 916 3.32E-14 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_II1485 808430019fac6bf9f5ab4a4eb7c1ade9 926 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 64 87 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 8.5E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 8.5E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 8.5E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 8.5E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 8.5E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 SUPERFAMILY SSF54919 1 140 1.96E-60 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 Gene3D G3DSA:3.30.70.141 1 143 1.5E-58 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.583 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 Pfam PF00334 Nucleoside diphosphate kinase 4 138 4.8E-57 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_0615 81589f2a077d409d1441ad08dd8e9938 144 SMART SM00562 3 140 2.2E-90 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_0943 5cac96a9e330b73516a4f37c36b8246a 306 SUPERFAMILY SSF52768 2 286 4.8E-81 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VS_0943 5cac96a9e330b73516a4f37c36b8246a 306 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 1.4E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VS_0943 5cac96a9e330b73516a4f37c36b8246a 306 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 1.4E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VS_0943 5cac96a9e330b73516a4f37c36b8246a 306 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 1.4E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VS_0943 5cac96a9e330b73516a4f37c36b8246a 306 Gene3D G3DSA:3.40.800.20 2 302 7.9E-64 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VS_0943 5cac96a9e330b73516a4f37c36b8246a 306 Pfam PF00850 Histone deacetylase domain 32 286 1.1E-52 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 147 418 3.5E-115 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 146 419 64.599 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 Gene3D G3DSA:3.40.50.300 214 407 1.4E-116 T 14-10-2018 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 SMART SM00382 217 397 4.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 SMART SM00962 218 419 2.0E-124 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 Gene3D G3DSA:1.20.120.140 120 417 1.4E-116 T 14-10-2018 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 SUPERFAMILY SSF52540 214 419 2.19E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 SUPERFAMILY SSF47364 118 197 1.7E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 Pfam PF00448 SRP54-type protein, GTPase domain 219 418 1.1E-77 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 SMART SM00963 123 203 2.6E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 Pfam PF02881 SRP54-type protein, helical bundle domain 138 199 1.9E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_3021 a4a2a34bbfbf692153472903c7eef12a 422 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 392 405 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_II0441 8b513772321436e99631c80fbe28d5f0 222 SUPERFAMILY SSF52218 23 197 5.79E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_II0441 8b513772321436e99631c80fbe28d5f0 222 Pfam PF02525 Flavodoxin-like fold 23 191 6.2E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold VS_II0441 8b513772321436e99631c80fbe28d5f0 222 Gene3D G3DSA:3.40.50.360 18 198 4.5E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2662 e485996326338146e22c86b0d8464a96 219 Pfam PF02570 Precorrin-8X methylmutase 14 215 2.2E-74 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 VS_2662 e485996326338146e22c86b0d8464a96 219 SUPERFAMILY SSF63965 14 215 1.96E-67 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 VS_2662 e485996326338146e22c86b0d8464a96 219 Gene3D G3DSA:3.40.50.10230 2 219 1.1E-83 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 VS_2293 3b4db977232620fc822d6caac2f7259c 407 PRINTS PR00207 Flagellin signature 95 114 3.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_2293 3b4db977232620fc822d6caac2f7259c 407 PRINTS PR00207 Flagellin signature 56 73 3.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_2293 3b4db977232620fc822d6caac2f7259c 407 PRINTS PR00207 Flagellin signature 130 153 3.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_2293 3b4db977232620fc822d6caac2f7259c 407 Gene3D G3DSA:1.10.8.410 359 406 8.5E-21 T 14-10-2018 VS_2293 3b4db977232620fc822d6caac2f7259c 407 Gene3D G3DSA:1.20.58.1830 24 52 3.8E-72 T 14-10-2018 VS_2293 3b4db977232620fc822d6caac2f7259c 407 Gene3D G3DSA:1.20.1330.10 207 358 8.4E-22 T 14-10-2018 VS_2293 3b4db977232620fc822d6caac2f7259c 407 Pfam PF00700 Bacterial flagellin C-terminal helical region 322 406 4.9E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_2293 3b4db977232620fc822d6caac2f7259c 407 Pfam PF07196 Flagellin hook IN motif 213 268 5.8E-12 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VS_2293 3b4db977232620fc822d6caac2f7259c 407 SUPERFAMILY SSF64518 20 406 2.22E-99 T 14-10-2018 VS_2293 3b4db977232620fc822d6caac2f7259c 407 Pfam PF00669 Bacterial flagellin N-terminal helical region 24 160 1.1E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_2293 3b4db977232620fc822d6caac2f7259c 407 Gene3D G3DSA:1.20.1330.10 64 190 3.8E-72 T 14-10-2018 VS_II1446 6540a0f11b919131c2ff556c48ce201f 130 SUPERFAMILY SSF55331 3 120 9.29E-31 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VS_II1446 6540a0f11b919131c2ff556c48ce201f 130 Pfam PF14552 Tautomerase enzyme 38 114 4.5E-23 T 14-10-2018 IPR037479 Tautomerase, MSAD family VS_II1446 6540a0f11b919131c2ff556c48ce201f 130 Gene3D G3DSA:3.30.429.10 3 130 1.2E-37 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VS_2495 e8c29ef0978859535517937569adccde 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 437 8.4E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2495 e8c29ef0978859535517937569adccde 477 Gene3D G3DSA:3.40.710.10 242 469 8.2E-51 T 14-10-2018 VS_2495 e8c29ef0978859535517937569adccde 477 Gene3D G3DSA:3.40.710.10 26 85 3.2E-5 T 14-10-2018 VS_2495 e8c29ef0978859535517937569adccde 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 33 439 3.2E-96 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2495 e8c29ef0978859535517937569adccde 477 Gene3D G3DSA:3.50.80.20 86 176 9.7E-12 T 14-10-2018 VS_2495 e8c29ef0978859535517937569adccde 477 SUPERFAMILY SSF56601 28 446 8.25E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_2495 e8c29ef0978859535517937569adccde 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 415 428 3.7E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2495 e8c29ef0978859535517937569adccde 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 336 350 3.7E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2495 e8c29ef0978859535517937569adccde 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 277 299 3.7E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2495 e8c29ef0978859535517937569adccde 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 351 365 3.7E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2495 e8c29ef0978859535517937569adccde 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 3.7E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2282 68e7f6c428fd7dc39126d24ffc1ab3ff 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 149 3.0E-24 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain VS_2282 68e7f6c428fd7dc39126d24ffc1ab3ff 151 Gene3D G3DSA:2.40.50.140 81 151 2.7E-10 T 14-10-2018 VS_2282 68e7f6c428fd7dc39126d24ffc1ab3ff 151 SUPERFAMILY SSF141322 88 147 1.7E-6 T 14-10-2018 VS_2620 d1d9083e84d113077672e695e292000f 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 5.2E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VS_2620 d1d9083e84d113077672e695e292000f 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 5.2E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VS_2620 d1d9083e84d113077672e695e292000f 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 5.2E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VS_2620 d1d9083e84d113077672e695e292000f 298 Pfam PF00717 Peptidase S24-like 85 161 9.0E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VS_2620 d1d9083e84d113077672e695e292000f 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 1.9E-45 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VS_2620 d1d9083e84d113077672e695e292000f 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VS_2620 d1d9083e84d113077672e695e292000f 298 Gene3D G3DSA:2.10.109.10 77 271 4.0E-74 T 14-10-2018 VS_2620 d1d9083e84d113077672e695e292000f 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VS_2620 d1d9083e84d113077672e695e292000f 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VS_2620 d1d9083e84d113077672e695e292000f 298 Pfam PF10502 Signal peptidase, peptidase S26 209 268 7.4E-8 T 14-10-2018 IPR019533 Peptidase S26 VS_2620 d1d9083e84d113077672e695e292000f 298 Gene3D G3DSA:2.170.230.10 154 230 4.0E-74 T 14-10-2018 VS_2620 d1d9083e84d113077672e695e292000f 298 SUPERFAMILY SSF51306 77 297 2.96E-69 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VS_2834 4f2285412e51c7681d15dba33028772f 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.9E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.5E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.9E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VS_2834 4f2285412e51c7681d15dba33028772f 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_2834 4f2285412e51c7681d15dba33028772f 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.1E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 Gene3D G3DSA:2.40.30.10 338 393 2.0E-29 T 14-10-2018 VS_2834 4f2285412e51c7681d15dba33028772f 394 SUPERFAMILY SSF52540 6 219 1.84E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2834 4f2285412e51c7681d15dba33028772f 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.4E-227 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2834 4f2285412e51c7681d15dba33028772f 394 SUPERFAMILY SSF50465 302 394 1.99E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VS_2834 4f2285412e51c7681d15dba33028772f 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 58.792 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2834 4f2285412e51c7681d15dba33028772f 394 SUPERFAMILY SSF50447 205 301 4.52E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2834 4f2285412e51c7681d15dba33028772f 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2834 4f2285412e51c7681d15dba33028772f 394 Gene3D G3DSA:3.40.50.300 1 203 1.4E-69 T 14-10-2018 VS_2834 4f2285412e51c7681d15dba33028772f 394 Gene3D G3DSA:2.40.30.10 206 334 1.2E-50 T 14-10-2018 VS_1884 88d761213783ba72488efb76520c4b9d 183 PRINTS PR00070 Dihydrofolate reductase signature 119 133 6.4E-11 T 14-10-2018 VS_1884 88d761213783ba72488efb76520c4b9d 183 PRINTS PR00070 Dihydrofolate reductase signature 40 50 6.4E-11 T 14-10-2018 VS_1884 88d761213783ba72488efb76520c4b9d 183 PRINTS PR00070 Dihydrofolate reductase signature 67 78 6.4E-11 T 14-10-2018 VS_1884 88d761213783ba72488efb76520c4b9d 183 PRINTS PR00070 Dihydrofolate reductase signature 54 62 6.4E-11 T 14-10-2018 VS_1884 88d761213783ba72488efb76520c4b9d 183 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 40 62 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 VS_1884 88d761213783ba72488efb76520c4b9d 183 Gene3D G3DSA:3.40.430.10 27 183 1.8E-41 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_1884 88d761213783ba72488efb76520c4b9d 183 Pfam PF00186 Dihydrofolate reductase 28 182 6.5E-37 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VS_1884 88d761213783ba72488efb76520c4b9d 183 SUPERFAMILY SSF53597 28 182 3.17E-42 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 Gene3D G3DSA:3.30.70.1660 284 362 1.1E-12 T 14-10-2018 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 1.9E-169 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 SUPERFAMILY SSF75620 12 355 2.49E-135 T 14-10-2018 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 Gene3D G3DSA:1.20.58.410 2 104 3.4E-9 T 14-10-2018 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 SMART SM00937 67 180 1.3E-64 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 Pfam PF03462 PCRF domain 13 205 1.6E-75 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.485 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 Pfam PF00472 RF-1 domain 218 323 2.6E-38 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 Gene3D G3DSA:3.30.70.1660 109 223 1.4E-44 T 14-10-2018 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 Gene3D G3DSA:3.30.160.20 224 283 3.1E-34 T 14-10-2018 VS_0752 809df0e45f5f620c8a1909c9c8637908 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 SUPERFAMILY SSF53738 30 238 3.06E-51 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Gene3D G3DSA:3.30.310.50 446 549 1.5E-35 T 14-10-2018 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 SUPERFAMILY SSF53738 308 449 4.71E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Gene3D G3DSA:3.40.120.10 15 221 1.2E-73 T 14-10-2018 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 4 546 0.0 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Gene3D G3DSA:3.40.120.10 322 445 5.8E-35 T 14-10-2018 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 213 320 2.0E-16 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 SUPERFAMILY SSF55957 436 546 2.79E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 441 3.1E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Gene3D G3DSA:3.40.120.10 224 321 1.9E-44 T 14-10-2018 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 493 540 2.2E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 143 152 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 8.8E-39 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2252 fd506b527e8cde158ac4285f941bb30b 551 SUPERFAMILY SSF53738 212 320 2.35E-7 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 SUPERFAMILY SSF53955 194 390 8.15E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 202 736 2.4E-154 T 14-10-2018 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 Pfam PF00905 Penicillin binding protein transpeptidase domain 461 699 2.4E-26 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 Gene3D G3DSA:1.10.3810.10 190 393 1.5E-258 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 57 779 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 Pfam PF14814 Bifunctional transglycosylase second domain 102 185 7.1E-26 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 PIRSF PIRSF002799 23 799 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 Pfam PF00912 Transglycosylase 197 368 4.2E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 Gene3D G3DSA:3.40.710.10 92 749 1.5E-258 T 14-10-2018 VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 SUPERFAMILY SSF56601 351 786 8.8E-110 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_2524 9681f95289cb076b2f3a1d5debdbf7c7 799 Gene3D G3DSA:3.30.2060.10 100 189 1.5E-258 T 14-10-2018 VS_2657 bfdf5feddcda66d5ddb79cbf07f38b94 314 Gene3D G3DSA:3.40.50.1980 14 135 9.5E-21 T 14-10-2018 VS_2657 bfdf5feddcda66d5ddb79cbf07f38b94 314 Pfam PF01497 Periplasmic binding protein 46 281 2.2E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_2657 bfdf5feddcda66d5ddb79cbf07f38b94 314 SUPERFAMILY SSF53807 34 307 9.81E-44 T 14-10-2018 VS_2657 bfdf5feddcda66d5ddb79cbf07f38b94 314 Gene3D G3DSA:3.40.50.1980 138 313 1.7E-50 T 14-10-2018 VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 SUPERFAMILY SSF53850 88 293 3.08E-19 T 14-10-2018 VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 Pfam PF03466 LysR substrate binding domain 92 287 1.5E-8 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 SUPERFAMILY SSF46785 2 81 4.56E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.5E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 Gene3D G3DSA:1.10.10.10 1 85 7.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 Gene3D G3DSA:3.40.190.10 169 269 4.8E-25 T 14-10-2018 VS_II0110 7ee7fa536c4d50185f8d833d22cbff11 304 Gene3D G3DSA:3.40.190.10 88 290 4.8E-25 T 14-10-2018 VS_2474 2d963a2c4346ea95dc104a42f234f9ca 292 Pfam PF01136 Peptidase family U32 81 239 3.2E-15 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VS_0301 e365ecb31fa713891c812460512fcb3d 258 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 9.1E-49 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VS_0301 e365ecb31fa713891c812460512fcb3d 258 PIRSF PIRSF000857 5 253 7.3E-57 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VS_0301 e365ecb31fa713891c812460512fcb3d 258 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 27 247 7.7E-88 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 VS_0301 e365ecb31fa713891c812460512fcb3d 258 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 39 248 2.1E-83 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VS_0301 e365ecb31fa713891c812460512fcb3d 258 Gene3D G3DSA:3.40.50.620 7 221 5.1E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0301 e365ecb31fa713891c812460512fcb3d 258 SUPERFAMILY SSF52402 26 213 9.21E-53 T 14-10-2018 VS_0301 e365ecb31fa713891c812460512fcb3d 258 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 38.725 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VS_1960 e77b4f5cae509ecfe5cd8f55c4bc2dcf 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 11 107 6.0E-47 T 14-10-2018 IPR007376 dsDNA mimic, putative VS_1960 e77b4f5cae509ecfe5cd8f55c4bc2dcf 109 Gene3D G3DSA:3.10.450.140 8 108 3.0E-42 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VS_1960 e77b4f5cae509ecfe5cd8f55c4bc2dcf 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 4 109 35.984 T 14-10-2018 IPR007376 dsDNA mimic, putative VS_1960 e77b4f5cae509ecfe5cd8f55c4bc2dcf 109 SUPERFAMILY SSF102816 2 108 2.88E-49 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VS_1960 e77b4f5cae509ecfe5cd8f55c4bc2dcf 109 Pfam PF04269 Protein of unknown function, DUF440 8 108 8.1E-45 T 14-10-2018 IPR007376 dsDNA mimic, putative VS_1960 e77b4f5cae509ecfe5cd8f55c4bc2dcf 109 PIRSF PIRSF004916 1 108 1.4E-52 T 14-10-2018 IPR007376 dsDNA mimic, putative VS_II0465 1dd2b93148a1602a73b0f83347e82fa3 330 Gene3D G3DSA:3.40.50.1360 60 325 1.2E-78 T 14-10-2018 VS_II0465 1dd2b93148a1602a73b0f83347e82fa3 330 Gene3D G3DSA:1.10.10.60 8 59 5.8E-20 T 14-10-2018 VS_II0465 1dd2b93148a1602a73b0f83347e82fa3 330 Pfam PF04198 Putative sugar-binding domain 66 320 9.4E-76 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VS_II0465 1dd2b93148a1602a73b0f83347e82fa3 330 SUPERFAMILY SSF100950 70 320 3.52E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_II0465 1dd2b93148a1602a73b0f83347e82fa3 330 SUPERFAMILY SSF46689 16 80 4.66E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 3.1E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 5.6E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 4.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 4.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 SMART SM00100 30 151 2.3E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 SUPERFAMILY SSF46785 165 244 7.32E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 Gene3D G3DSA:1.10.10.10 165 247 1.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 Gene3D G3DSA:2.60.120.10 43 164 9.0E-49 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_1467 61e6850b4ac5181d2cb26b72e8e1ce1c 248 SMART SM00419 187 235 1.5E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VS_0853 3e63615058418f96b1a3e678ef243bf7 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 6.1E-19 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VS_0853 3e63615058418f96b1a3e678ef243bf7 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 7.5E-18 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VS_1955 706c59ac9372c0cdb7088fdfe66d4bfe 352 Gene3D G3DSA:3.40.1440.10 7 102 8.1E-32 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VS_1955 706c59ac9372c0cdb7088fdfe66d4bfe 352 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 351 6.5E-128 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VS_1955 706c59ac9372c0cdb7088fdfe66d4bfe 352 SUPERFAMILY SSF46600 190 243 5.75E-13 T 14-10-2018 IPR036876 UVR domain superfamily VS_1955 706c59ac9372c0cdb7088fdfe66d4bfe 352 SUPERFAMILY SSF82771 17 100 2.35E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VS_1955 706c59ac9372c0cdb7088fdfe66d4bfe 352 Pfam PF01541 GIY-YIG catalytic domain 18 93 8.0E-13 T 14-10-2018 IPR000305 GIY-YIG endonuclease VS_1955 706c59ac9372c0cdb7088fdfe66d4bfe 352 Pfam PF02151 UvrB/uvrC motif 206 238 6.6E-10 T 14-10-2018 IPR001943 UVR domain GO:0005515 VS_1955 706c59ac9372c0cdb7088fdfe66d4bfe 352 SMART SM00465 17 98 1.8E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 Gene3D G3DSA:1.10.275.10 1 117 2.9E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 SUPERFAMILY SSF48557 4 448 1.32E-108 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.5E-51 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 7.3E-150 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 Pfam PF00206 Lyase 14 313 5.7E-73 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.9E-19 T 14-10-2018 IPR000362 Fumarate lyase family VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 7.9E-19 T 14-10-2018 IPR000362 Fumarate lyase family VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 7.9E-19 T 14-10-2018 IPR000362 Fumarate lyase family VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.9E-19 T 14-10-2018 IPR000362 Fumarate lyase family VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 Gene3D G3DSA:1.10.40.30 383 446 5.4E-158 T 14-10-2018 VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 Gene3D G3DSA:1.20.200.10 118 447 5.4E-158 T 14-10-2018 VS_2034 2b119bdb8d6fcf5e743cf81ccd6ff6db 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 Gene3D G3DSA:1.10.3210.10 224 413 4.7E-50 T 14-10-2018 VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 Gene3D G3DSA:1.10.3210.10 14 194 1.3E-17 T 14-10-2018 VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 SMART SM00471 26 167 5.5 T 14-10-2018 IPR003607 HD/PDEase domain VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 SMART SM00471 240 375 1.4E-10 T 14-10-2018 IPR003607 HD/PDEase domain VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 SUPERFAMILY SSF109604 17 190 2.62E-14 T 14-10-2018 VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 SUPERFAMILY SSF109604 237 405 5.11E-31 T 14-10-2018 VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 TIGRFAM TIGR00277 HDIG: HDIG domain 244 334 1.4E-7 T 14-10-2018 IPR006675 HDIG domain VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 Pfam PF01966 HD domain 244 365 8.2E-19 T 14-10-2018 IPR006674 HD domain VS_II1179 7f46973dbef1109ec134429c3d8f1006 421 Pfam PF01966 HD domain 33 145 8.7E-8 T 14-10-2018 IPR006674 HD domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4909 4927 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 Gene3D G3DSA:2.150.10.10 4882 5014 1.6E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1607 1741 1.7E-21 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 782 913 2.1E-22 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2153 2295 5.4E-22 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2447 2579 1.9E-30 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1058 1191 1.1E-21 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1882 2014 1.3E-22 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1332 1464 2.3E-22 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2301 2443 6.3E-37 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 SUPERFAMILY SSF51120 4856 4968 1.22E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4918 4936 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4949 5039 9.5E-9 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4900 4918 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 PRINTS PR00313 NodO calcium binding signature 4913 4921 2.8E-6 T 14-10-2018 VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 PRINTS PR00313 NodO calcium binding signature 4901 4912 2.8E-6 T 14-10-2018 VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 PRINTS PR00313 NodO calcium binding signature 4922 4930 2.8E-6 T 14-10-2018 VS_1240 1fbc87e7300fd54924702f10c1c62a89 5042 PRINTS PR00313 NodO calcium binding signature 4931 4940 2.8E-6 T 14-10-2018 VS_3145 0ab527cbb211618b13043ad462a3bec4 317 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 2.0E-141 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 VS_3145 0ab527cbb211618b13043ad462a3bec4 317 Gene3D G3DSA:3.30.470.10 10 127 6.0E-106 T 14-10-2018 VS_3145 0ab527cbb211618b13043ad462a3bec4 317 SUPERFAMILY SSF56752 7 307 1.96E-103 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VS_3145 0ab527cbb211618b13043ad462a3bec4 317 Gene3D G3DSA:3.20.10.10 138 289 6.0E-106 T 14-10-2018 VS_3145 0ab527cbb211618b13043ad462a3bec4 317 Pfam PF01063 Amino-transferase class IV 36 268 1.2E-46 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VS_3145 0ab527cbb211618b13043ad462a3bec4 317 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VS_1833 2e3ebc948ab29c04504f30fe6aa49342 547 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.3E-295 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VS_1833 2e3ebc948ab29c04504f30fe6aa49342 547 SUPERFAMILY SSF53383 25 527 6.85E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1833 2e3ebc948ab29c04504f30fe6aa49342 547 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 63 442 2.4E-56 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VS_1833 2e3ebc948ab29c04504f30fe6aa49342 547 Gene3D G3DSA:3.90.1150.170 50 523 8.9E-111 T 14-10-2018 VS_1833 2e3ebc948ab29c04504f30fe6aa49342 547 Gene3D G3DSA:3.40.640.10 122 387 8.9E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_0452 52acb28076700fa69b2c0508cc2e2f23 193 Gene3D G3DSA:3.10.20.310 6 56 1.5E-16 T 14-10-2018 VS_0452 52acb28076700fa69b2c0508cc2e2f23 193 Gene3D G3DSA:3.40.50.11690 58 185 2.7E-37 T 14-10-2018 VS_0452 52acb28076700fa69b2c0508cc2e2f23 193 Pfam PF03799 Cell division protein FtsQ 60 172 3.0E-23 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB VS_0452 52acb28076700fa69b2c0508cc2e2f23 193 Pfam PF08478 POTRA domain, FtsQ-type 12 56 7.2E-12 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type VS_2319 481bce0f8b2369ea5bd924f447932fde 218 Pfam PF00551 Formyl transferase 8 187 1.2E-61 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_2319 481bce0f8b2369ea5bd924f447932fde 218 SUPERFAMILY SSF53328 8 205 6.8E-66 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_2319 481bce0f8b2369ea5bd924f447932fde 218 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 140 163 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VS_2319 481bce0f8b2369ea5bd924f447932fde 218 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 197 6.4E-78 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VS_2319 481bce0f8b2369ea5bd924f447932fde 218 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 194 31.002 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VS_2319 481bce0f8b2369ea5bd924f447932fde 218 Gene3D G3DSA:3.40.50.170 9 218 9.1E-84 T 14-10-2018 VS_1290 9ffc65782f20bdb2cb0d1f09335ec9a4 211 Pfam PF01810 LysE type translocator 15 208 5.6E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_1290 9ffc65782f20bdb2cb0d1f09335ec9a4 211 PIRSF PIRSF006324 1 210 5.2E-56 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:3.30.70.1320 131 320 6.2E-247 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:3.30.70.1430 555 665 6.2E-247 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 SUPERFAMILY SSF82866 286 480 5.62E-34 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 2.7E-154 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:3.30.2090.10 713 800 6.2E-247 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:3.30.70.1440 666 861 6.2E-247 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 SUPERFAMILY SSF82714 177 259 6.02E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:1.20.1640.10 498 1018 6.2E-247 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:1.20.1640.10 8 497 6.2E-247 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 SUPERFAMILY SSF82693 39 131 6.28E-17 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:3.30.70.1430 38 808 6.2E-247 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 Gene3D G3DSA:3.30.2090.10 172 263 6.2E-247 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 SUPERFAMILY SSF82693 139 317 6.28E-6 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 SUPERFAMILY SSF82866 797 1022 1.7E-46 T 14-10-2018 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 2.2E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.2E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.2E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 2.2E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 2.2E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0383 182f8786af6a5f2f67130b9426d7789f 1035 SUPERFAMILY SSF82714 724 797 2.09E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0988 4b76813833a8432b8973120d00d45b42 495 Pfam PF00498 FHA domain 31 97 7.6E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VS_II0988 4b76813833a8432b8973120d00d45b42 495 SMART SM00240 29 80 4.6E-7 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VS_II0988 4b76813833a8432b8973120d00d45b42 495 SUPERFAMILY SSF49879 21 106 2.49E-22 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VS_II0988 4b76813833a8432b8973120d00d45b42 495 Gene3D G3DSA:2.60.200.20 4 111 1.2E-20 T 14-10-2018 VS_1052 31b57d3458b9e3a3bfb70b1ed5a2efe7 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 14-10-2018 VS_1052 31b57d3458b9e3a3bfb70b1ed5a2efe7 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VS_1052 31b57d3458b9e3a3bfb70b1ed5a2efe7 758 PIRSF PIRSF000379 5 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VS_1052 31b57d3458b9e3a3bfb70b1ed5a2efe7 758 SUPERFAMILY SSF51998 4 757 1.1E-286 T 14-10-2018 VS_1052 31b57d3458b9e3a3bfb70b1ed5a2efe7 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VS_1052 31b57d3458b9e3a3bfb70b1ed5a2efe7 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 5.1E-201 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VS_1052 31b57d3458b9e3a3bfb70b1ed5a2efe7 758 Pfam PF01228 Glycine radical 628 739 1.3E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VS_2283 f71f10ae198d4e4845c4af4fb81ed7e6 135 SUPERFAMILY SSF46955 5 130 4.58E-31 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VS_2283 f71f10ae198d4e4845c4af4fb81ed7e6 135 SMART SM00422 5 74 2.3E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2283 f71f10ae198d4e4845c4af4fb81ed7e6 135 Gene3D G3DSA:1.10.1660.10 2 129 2.7E-28 T 14-10-2018 VS_2283 f71f10ae198d4e4845c4af4fb81ed7e6 135 Pfam PF09278 MerR, DNA binding 50 111 3.9E-14 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding VS_2283 f71f10ae198d4e4845c4af4fb81ed7e6 135 Pfam PF00376 MerR family regulatory protein 6 43 3.3E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_2283 f71f10ae198d4e4845c4af4fb81ed7e6 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 5 130 2.7E-52 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VS_2283 f71f10ae198d4e4845c4af4fb81ed7e6 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VS_II1490 768c5bf3d90bc18d2f8b66d5525b0baa 260 Gene3D G3DSA:2.50.20.10 25 254 7.3E-38 T 14-10-2018 VS_II1490 768c5bf3d90bc18d2f8b66d5525b0baa 260 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 254 9.3E-38 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VS_II1490 768c5bf3d90bc18d2f8b66d5525b0baa 260 PIRSF PIRSF028205 1 257 4.3E-97 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 Gene3D G3DSA:2.40.50.100 1 79 1.5E-21 T 14-10-2018 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 Pfam PF02817 e3 binding domain 113 145 7.3E-13 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 SUPERFAMILY SSF51230 1 95 6.54E-24 T 14-10-2018 IPR011053 Single hybrid motif VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 Gene3D G3DSA:4.10.320.10 102 152 2.2E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 1.0E-187 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 Pfam PF00364 Biotin-requiring enzyme 4 76 3.6E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 SUPERFAMILY SSF47005 107 149 5.89E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 Gene3D G3DSA:3.30.559.10 169 401 1.1E-97 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 SUPERFAMILY SSF52777 172 400 6.23E-90 T 14-10-2018 VS_2242 25600b59532d9510ec9cfdb86a8aef09 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 2.7E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VS_2516 6a99136c8dcd9a29395602e5d29ce5e5 342 Gene3D G3DSA:3.40.50.300 1 240 5.3E-75 T 14-10-2018 VS_2516 6a99136c8dcd9a29395602e5d29ce5e5 342 SUPERFAMILY SSF50331 251 342 1.4E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_2516 6a99136c8dcd9a29395602e5d29ce5e5 342 Pfam PF00005 ABC transporter 20 164 2.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2516 6a99136c8dcd9a29395602e5d29ce5e5 342 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2516 6a99136c8dcd9a29395602e5d29ce5e5 342 SUPERFAMILY SSF52540 5 243 9.14E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2516 6a99136c8dcd9a29395602e5d29ce5e5 342 SMART SM00382 29 216 1.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2285 dcc21adfceb3001839bb158fa42102b0 384 Gene3D G3DSA:2.40.160.10 37 384 2.4E-35 T 14-10-2018 IPR023614 Porin domain superfamily VS_2285 dcc21adfceb3001839bb158fa42102b0 384 PRINTS PR00184 Neisseria sp. porin signature 71 96 1.4E-8 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 PRINTS PR00184 Neisseria sp. porin signature 108 127 1.4E-8 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 PRINTS PR00184 Neisseria sp. porin signature 166 183 1.4E-8 T 14-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 Pfam PF13609 Gram-negative porin 13 311 1.4E-29 T 14-10-2018 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 SUPERFAMILY SSF56935 36 384 6.02E-39 T 14-10-2018 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 167 178 6.2E-6 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 110 120 6.2E-6 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 376 384 6.2E-6 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VS_2285 dcc21adfceb3001839bb158fa42102b0 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 69 80 6.2E-6 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VS_II1277 a655990617ffdf713af99878b11d8fb9 239 Gene3D G3DSA:3.40.50.720 1 239 7.3E-75 T 14-10-2018 VS_II1277 a655990617ffdf713af99878b11d8fb9 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 4.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 Pfam PF00106 short chain dehydrogenase 3 189 6.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 SUPERFAMILY SSF51735 3 223 7.02E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1277 a655990617ffdf713af99878b11d8fb9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1198 5aa1216e8b207831ab3c8d09635982c3 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 19 108 2.0E-32 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC VS_1198 5aa1216e8b207831ab3c8d09635982c3 113 Pfam PF06942 GlpM protein 3 108 7.0E-49 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC VS_0087 93ebadcfa4be3b8598048909243f7da3 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.577 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VS_0087 93ebadcfa4be3b8598048909243f7da3 259 Gene3D G3DSA:3.40.1630.10 1 56 2.0E-20 T 14-10-2018 VS_0087 93ebadcfa4be3b8598048909243f7da3 259 SUPERFAMILY SSF53335 5 255 2.24E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0087 93ebadcfa4be3b8598048909243f7da3 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 1.7E-106 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VS_0087 93ebadcfa4be3b8598048909243f7da3 259 Gene3D G3DSA:3.40.50.150 57 259 2.9E-75 T 14-10-2018 VS_II1261 63a102864037f2cae3d4e1683c7c9882 248 SMART SM00014 81 229 1.7E-12 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VS_II1261 63a102864037f2cae3d4e1683c7c9882 248 Gene3D G3DSA:1.20.144.10 10 242 2.3E-43 T 14-10-2018 VS_II1261 63a102864037f2cae3d4e1683c7c9882 248 Pfam PF01569 PAP2 superfamily 84 233 7.8E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VS_II1261 63a102864037f2cae3d4e1683c7c9882 248 SUPERFAMILY SSF48317 17 234 1.44E-21 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VS_2547 a89c5020af461eb649f1586c828f4084 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 1.4E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_2547 a89c5020af461eb649f1586c828f4084 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_2547 a89c5020af461eb649f1586c828f4084 136 SUPERFAMILY SSF54523 11 119 2.56E-20 T 14-10-2018 VS_2547 a89c5020af461eb649f1586c828f4084 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 1.1E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_2547 a89c5020af461eb649f1586c828f4084 136 Gene3D G3DSA:3.30.700.10 11 136 3.9E-26 T 14-10-2018 VS_2547 a89c5020af461eb649f1586c828f4084 136 Pfam PF00114 Pilin (bacterial filament) 39 131 6.6E-9 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VS_II1063 ba95e8422f29eb9686d584cb6f20361a 408 SUPERFAMILY SSF103473 19 402 5.49E-40 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II1063 ba95e8422f29eb9686d584cb6f20361a 408 Gene3D G3DSA:1.20.1250.20 14 401 2.8E-37 T 14-10-2018 VS_II1063 ba95e8422f29eb9686d584cb6f20361a 408 Pfam PF07690 Major Facilitator Superfamily 26 261 9.6E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1063 ba95e8422f29eb9686d584cb6f20361a 408 Pfam PF07690 Major Facilitator Superfamily 268 400 5.3E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Gene3D G3DSA:3.90.1600.30 516 639 2.5E-8 T 14-10-2018 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Gene3D G3DSA:1.10.132.60 643 787 5.4E-58 T 14-10-2018 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Gene3D G3DSA:2.40.50.590 6 153 1.3E-36 T 14-10-2018 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Pfam PF00136 DNA polymerase family B 378 743 9.3E-43 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 72 296 8.6E-20 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Gene3D G3DSA:1.10.287.690 468 514 4.3E-25 T 14-10-2018 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Gene3D G3DSA:3.30.70.2250 41 108 1.3E-36 T 14-10-2018 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 SUPERFAMILY SSF53098 4 389 9.49E-84 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Gene3D G3DSA:3.90.1600.10 348 446 6.1E-29 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 SUPERFAMILY SSF56672 385 780 5.39E-116 T 14-10-2018 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 Gene3D G3DSA:3.30.420.10 156 347 2.0E-72 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1957 c8dcf9ff3d3939185015e8c81e1c10b5 787 SMART SM00486 153 558 8.9E-66 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 SUPERFAMILY SSF48168 11 170 2.62E-53 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 Pfam PF02867 Ribonucleotide reductase, barrel domain 173 689 7.1E-136 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 11 710 0.0 T 14-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 Pfam PF08343 Ribonucleotide reductase N-terminal 12 93 3.5E-30 T 14-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 SUPERFAMILY SSF51998 171 694 1.43E-177 T 14-10-2018 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 Gene3D G3DSA:1.10.1650.20 290 341 1.1E-26 T 14-10-2018 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 99 693 3.5E-160 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 562 584 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 422 445 3.0E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 461 483 3.0E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 600 3.0E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 247 266 3.0E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 489 512 3.0E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 PRINTS PR01183 Ribonucleotide reductase large chain signature 378 389 3.0E-34 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1898 0a0f352be9e6062a8cec5eee27a4a2d6 710 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 95 167 1.8E-10 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1695 dd7706ea8d9d7bdcc1c1d2cd79ab4432 252 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 252 45.527 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VS_1695 dd7706ea8d9d7bdcc1c1d2cd79ab4432 252 SUPERFAMILY SSF52540 16 227 2.03E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1695 dd7706ea8d9d7bdcc1c1d2cd79ab4432 252 Gene3D G3DSA:3.40.50.300 10 251 2.5E-56 T 14-10-2018 VS_1695 dd7706ea8d9d7bdcc1c1d2cd79ab4432 252 SMART SM00382 22 214 6.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1695 dd7706ea8d9d7bdcc1c1d2cd79ab4432 252 Pfam PF00005 ABC transporter 15 165 1.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 2.5E-6 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 169 3.4E-75 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 SUPERFAMILY SSF54211 174 258 8.35E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 233 246 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 326 338 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 SUPERFAMILY SSF56784 3 152 8.01E-39 T 14-10-2018 IPR036412 HAD-like superfamily VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 Gene3D G3DSA:3.40.50.1000 1 165 1.4E-45 T 14-10-2018 IPR023214 HAD superfamily VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 Gene3D G3DSA:3.30.230.40 166 261 7.7E-39 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 362 51.448 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 SUPERFAMILY SSF54211 259 349 3.41E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 174 362 38.038 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 1.8E-47 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 203 344 4.1E-66 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 149 2.8E-28 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VS_2023 630b32a1ffa65c8aec9b295a28bfe90b 362 Gene3D G3DSA:3.30.230.40 262 362 5.6E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VS_II1332 e8085235ac3a6f3e396606d7acb229e4 207 PIRSF PIRSF006324 1 206 6.7E-51 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_II1332 e8085235ac3a6f3e396606d7acb229e4 207 Pfam PF01810 LysE type translocator 14 204 1.6E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_2506 0c99f252678eb7e871377b9dcc9fc171 560 Gene3D G3DSA:3.10.105.10 272 519 1.3E-193 T 14-10-2018 VS_2506 0c99f252678eb7e871377b9dcc9fc171 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VS_2506 0c99f252678eb7e871377b9dcc9fc171 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 457 6.5E-73 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_2506 0c99f252678eb7e871377b9dcc9fc171 560 Gene3D G3DSA:3.90.76.10 66 172 1.3E-193 T 14-10-2018 VS_2506 0c99f252678eb7e871377b9dcc9fc171 560 SUPERFAMILY SSF53850 42 544 1.27E-104 T 14-10-2018 VS_2506 0c99f252678eb7e871377b9dcc9fc171 560 PIRSF PIRSF002741 6 542 6.9E-66 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_2506 0c99f252678eb7e871377b9dcc9fc171 560 Gene3D G3DSA:3.40.190.10 46 543 1.3E-193 T 14-10-2018 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 Gene3D G3DSA:3.40.50.1820 3 277 7.0E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00412 Epoxide hydrolase signature 257 279 1.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00412 Epoxide hydrolase signature 54 69 1.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00412 Epoxide hydrolase signature 113 126 1.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00412 Epoxide hydrolase signature 32 50 1.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 Pfam PF12697 Alpha/beta hydrolase family 28 274 4.6E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 SUPERFAMILY SSF53474 12 282 4.19E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 9.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 9.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2221 f2656f7552201eecee32a9df8e2c896c 283 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 9.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2164 4068d703a9cc7d6b3637034ae3a25428 100 SUPERFAMILY SSF46767 2 84 1.06E-24 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VS_2164 4068d703a9cc7d6b3637034ae3a25428 100 Gene3D G3DSA:1.10.10.10 1 100 1.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2164 4068d703a9cc7d6b3637034ae3a25428 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 5 83 1.7E-23 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VS_2462 6b5d05268efbcae71984a690014b3720 465 Hamap MF_01628 Thymidine phosphorylase [deoA]. 25 460 45.415 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VS_2462 6b5d05268efbcae71984a690014b3720 465 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 28 446 6.2E-160 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 Gene3D G3DSA:3.90.1170.30 360 455 7.5E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 SUPERFAMILY SSF52418 96 356 1.27E-88 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 SUPERFAMILY SSF54680 360 459 3.14E-28 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 SUPERFAMILY SSF47648 25 93 1.31E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 Pfam PF00591 Glycosyl transferase family, a/b domain 103 332 1.6E-48 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 PIRSF PIRSF000478 24 461 8.1E-149 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 373 446 1.5E-23 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 26 452 3.3E-211 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VS_2462 6b5d05268efbcae71984a690014b3720 465 Gene3D G3DSA:3.40.1030.10 93 345 1.7E-127 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 Pfam PF02885 Glycosyl transferase family, helical bundle domain 29 90 1.3E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 Gene3D G3DSA:1.20.970.10 30 218 1.7E-127 T 14-10-2018 VS_2462 6b5d05268efbcae71984a690014b3720 465 SMART SM00941 373 447 6.1E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2462 6b5d05268efbcae71984a690014b3720 465 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 136 151 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_0587 58c0ae2add22989dd9d51bbdb12ddde4 272 Pfam PF00005 ABC transporter 41 197 2.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0587 58c0ae2add22989dd9d51bbdb12ddde4 272 SMART SM00382 50 252 1.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0587 58c0ae2add22989dd9d51bbdb12ddde4 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 7.2E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VS_0587 58c0ae2add22989dd9d51bbdb12ddde4 272 SUPERFAMILY SSF52540 21 258 1.3E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0587 58c0ae2add22989dd9d51bbdb12ddde4 272 Gene3D G3DSA:3.40.50.300 21 268 3.6E-66 T 14-10-2018 VS_0587 58c0ae2add22989dd9d51bbdb12ddde4 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1376 e02157d74c199a81f087e74177b19f68 1187 SMART SM00490 755 848 2.5E-8 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1376 e02157d74c199a81f087e74177b19f68 1187 Pfam PF08463 EcoEI R protein C-terminal 1022 1182 1.3E-29 T 14-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 VS_1376 e02157d74c199a81f087e74177b19f68 1187 Pfam PF04851 Type III restriction enzyme, res subunit 457 635 2.4E-38 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VS_1376 e02157d74c199a81f087e74177b19f68 1187 Pfam PF00271 Helicase conserved C-terminal domain 737 846 7.6E-10 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1376 e02157d74c199a81f087e74177b19f68 1187 SUPERFAMILY SSF52540 472 852 1.05E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1376 e02157d74c199a81f087e74177b19f68 1187 Gene3D G3DSA:3.90.1570.30 224 357 1.0E-12 T 14-10-2018 VS_1376 e02157d74c199a81f087e74177b19f68 1187 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 243 409 1.5E-14 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VS_1376 e02157d74c199a81f087e74177b19f68 1187 Gene3D G3DSA:3.40.50.300 653 877 2.8E-52 T 14-10-2018 VS_1376 e02157d74c199a81f087e74177b19f68 1187 Gene3D G3DSA:3.40.50.300 438 651 8.9E-54 T 14-10-2018 VS_1376 e02157d74c199a81f087e74177b19f68 1187 SMART SM00487 454 674 5.8E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 SUPERFAMILY SSF55205 1 424 2.4E-145 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 4.2E-142 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 Gene3D G3DSA:3.65.10.10 242 419 2.4E-161 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 PIRSF PIRSF000505 1 425 1.3E-155 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 Gene3D G3DSA:3.65.10.10 20 224 2.4E-161 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.321 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VS_1079 0f9d9ecf9057219aad7d9a4d6696cde8 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 3.3E-156 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VS_1346 8642af61b9d2aae703463b84652eddc4 390 SUPERFAMILY SSF54506 184 388 6.67E-73 T 14-10-2018 VS_1346 8642af61b9d2aae703463b84652eddc4 390 Gene3D G3DSA:3.10.310.10 180 370 1.2E-145 T 14-10-2018 VS_1346 8642af61b9d2aae703463b84652eddc4 390 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 387 3.6E-212 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 VS_1346 8642af61b9d2aae703463b84652eddc4 390 SUPERFAMILY SSF54506 3 181 1.96E-69 T 14-10-2018 VS_1346 8642af61b9d2aae703463b84652eddc4 390 Gene3D G3DSA:3.10.310.10 10 383 1.2E-145 T 14-10-2018 VS_1346 8642af61b9d2aae703463b84652eddc4 390 Pfam PF04303 PrpF protein 5 387 4.3E-169 T 14-10-2018 IPR007400 PrpF protein VS_2680 be52be1ac59b36a4c2ac33d89e341581 140 SUPERFAMILY SSF53098 3 137 8.5E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2680 be52be1ac59b36a4c2ac33d89e341581 140 SMART SM00732 3 104 1.6E-34 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VS_2680 be52be1ac59b36a4c2ac33d89e341581 140 Pfam PF03652 Holliday junction resolvase 4 136 4.9E-36 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VS_2680 be52be1ac59b36a4c2ac33d89e341581 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.2 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VS_2680 be52be1ac59b36a4c2ac33d89e341581 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 2.2E-48 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VS_2680 be52be1ac59b36a4c2ac33d89e341581 140 Gene3D G3DSA:3.30.420.140 1 139 6.8E-40 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VS_1941 2c2d024f1fefd34bb04d8ead8aa56801 92 Gene3D G3DSA:3.10.20.30 2 90 9.9E-16 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_1941 2c2d024f1fefd34bb04d8ead8aa56801 92 SUPERFAMILY SSF54292 3 80 6.16E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_1941 2c2d024f1fefd34bb04d8ead8aa56801 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 1.4E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VS_1941 2c2d024f1fefd34bb04d8ead8aa56801 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VS_II1334 0cd7d16ed0c78f8d4dfe2c8b65f76516 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VS_II1334 0cd7d16ed0c78f8d4dfe2c8b65f76516 506 Gene3D G3DSA:3.40.309.10 270 502 1.5E-73 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_II1334 0cd7d16ed0c78f8d4dfe2c8b65f76516 506 Gene3D G3DSA:3.40.605.10 10 269 4.6E-91 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_II1334 0cd7d16ed0c78f8d4dfe2c8b65f76516 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VS_II1334 0cd7d16ed0c78f8d4dfe2c8b65f76516 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 2.4E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_II1334 0cd7d16ed0c78f8d4dfe2c8b65f76516 506 SUPERFAMILY SSF53720 14 497 5.76E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_1853 bae809310a392f2a66a8434252a6df84 247 Gene3D G3DSA:3.30.70.580 78 242 1.4E-56 T 14-10-2018 VS_1853 bae809310a392f2a66a8434252a6df84 247 SUPERFAMILY SSF55174 17 96 8.98E-12 T 14-10-2018 VS_1853 bae809310a392f2a66a8434252a6df84 247 Gene3D G3DSA:3.30.70.1560 143 224 1.4E-56 T 14-10-2018 VS_1853 bae809310a392f2a66a8434252a6df84 247 Pfam PF00849 RNA pseudouridylate synthase 77 207 1.2E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1853 bae809310a392f2a66a8434252a6df84 247 Gene3D G3DSA:3.10.290.10 16 77 3.3E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_1853 bae809310a392f2a66a8434252a6df84 247 SUPERFAMILY SSF55120 76 242 1.6E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1853 bae809310a392f2a66a8434252a6df84 247 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 114 128 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_1853 bae809310a392f2a66a8434252a6df84 247 SMART SM00363 17 78 3.3E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_1853 bae809310a392f2a66a8434252a6df84 247 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 81 239 4.9E-49 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_1853 bae809310a392f2a66a8434252a6df84 247 Pfam PF01479 S4 domain 17 60 4.2E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 Gene3D G3DSA:3.90.700.10 237 363 7.4E-161 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 Gene3D G3DSA:4.10.80.40 543 577 8.8E-16 T 14-10-2018 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.3E-235 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 Gene3D G3DSA:3.50.50.60 7 409 7.4E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 3.0E-37 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 SUPERFAMILY SSF51905 2 418 1.89E-73 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 SUPERFAMILY SSF46977 444 583 1.1E-43 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 PIRSF PIRSF000171 1 572 2.9E-45 T 14-10-2018 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.6E-5 T 14-10-2018 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.6E-5 T 14-10-2018 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 SUPERFAMILY SSF56425 227 358 2.69E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 Gene3D G3DSA:1.20.58.100 424 538 1.2E-34 T 14-10-2018 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 Pfam PF00890 FAD binding domain 7 397 3.6E-114 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 8.4E-9 T 14-10-2018 VS_0248 2b8711de6f8b171eae5611d860a1bb24 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.4E-9 T 14-10-2018 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 SUPERFAMILY SSF46894 149 215 9.18E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 SMART SM00421 156 213 7.7E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 Gene3D G3DSA:3.40.50.2300 9 149 5.5E-35 T 14-10-2018 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 Gene3D G3DSA:1.10.10.10 157 221 2.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 1.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 2.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 2.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0631 f11b218a475d63493c7aba77f6846e0d 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 2.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0387 66724a3946de49709690567cd8fdbef3 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 6.0E-169 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VS_II0387 66724a3946de49709690567cd8fdbef3 350 Gene3D G3DSA:3.20.20.70 1 349 6.0E-166 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0387 66724a3946de49709690567cd8fdbef3 350 PIRSF PIRSF001361 1 350 6.6E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VS_II0387 66724a3946de49709690567cd8fdbef3 350 Pfam PF00793 DAHP synthetase I family 41 337 1.7E-105 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_II0387 66724a3946de49709690567cd8fdbef3 350 SUPERFAMILY SSF51569 6 347 1.88E-137 T 14-10-2018 VS_II1333 38b340f5b501fb3466c0e8c726306f56 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 60 2.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1333 38b340f5b501fb3466c0e8c726306f56 303 Gene3D G3DSA:3.40.190.290 89 290 6.9E-22 T 14-10-2018 VS_II1333 38b340f5b501fb3466c0e8c726306f56 303 Pfam PF03466 LysR substrate binding domain 85 285 5.6E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1333 38b340f5b501fb3466c0e8c726306f56 303 Gene3D G3DSA:1.10.10.10 1 86 1.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1333 38b340f5b501fb3466c0e8c726306f56 303 SUPERFAMILY SSF46785 1 109 3.4E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1333 38b340f5b501fb3466c0e8c726306f56 303 SUPERFAMILY SSF53850 86 285 1.55E-22 T 14-10-2018 VS_II1349 45eaf403e834b7af2cd8d3e577aba89b 444 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 7 375 9.3E-151 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VS_II1349 45eaf403e834b7af2cd8d3e577aba89b 444 PIRSF PIRSF004539 2 443 1.9E-183 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VS_II1349 45eaf403e834b7af2cd8d3e577aba89b 444 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 442 3.4E-146 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 Pfam PF13537 Glutamine amidotransferase domain 48 165 6.7E-41 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 Pfam PF00733 Asparagine synthase 211 366 1.0E-55 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 SUPERFAMILY SSF56235 1 196 2.74E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 SUPERFAMILY SSF52402 208 480 6.28E-74 T 14-10-2018 VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 Gene3D G3DSA:3.40.50.620 194 514 2.8E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 PIRSF PIRSF001589 362 511 7.0E-28 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 PIRSF PIRSF001589 1 379 6.1E-105 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 Gene3D G3DSA:3.60.20.10 2 193 4.0E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_2264 a8c5194d3638b90d9048c53f4e68cd73 556 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 1.1E-117 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 Gene3D G3DSA:3.40.50.2300 1 126 2.0E-36 T 14-10-2018 VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 SUPERFAMILY SSF52172 2 130 1.71E-39 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 214 3.2E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 Gene3D G3DSA:1.10.10.10 127 220 4.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 SMART SM00862 137 215 5.0E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 SUPERFAMILY SSF46894 140 215 8.22E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 SMART SM00448 2 112 2.9E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0674 2bbb1500943c0b98ecd0408e65e7db0b 221 Pfam PF00072 Response regulator receiver domain 4 113 7.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 Gene3D G3DSA:3.40.50.300 138 323 6.5E-61 T 14-10-2018 VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 Pfam PF00158 Sigma-54 interaction domain 152 318 3.6E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 238 253 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 SMART SM00382 172 315 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 SUPERFAMILY SSF46689 408 445 2.2E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 Gene3D G3DSA:1.10.10.60 394 444 3.2E-10 T 14-10-2018 VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 Gene3D G3DSA:1.10.8.60 325 393 4.3E-15 T 14-10-2018 VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 SUPERFAMILY SSF52540 152 388 5.4E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2141 cd4fe5671697cfec8b58418736f5b19c 447 Pfam PF02954 Bacterial regulatory protein, Fis family 413 442 7.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0917 ff31621567cbfe4af775c7eb87b18db8 109 SUPERFAMILY SSF82607 11 103 1.03E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VS_0917 ff31621567cbfe4af775c7eb87b18db8 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 6.8E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VS_0917 ff31621567cbfe4af775c7eb87b18db8 109 PIRSF PIRSF004555 3 109 1.3E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VS_0917 ff31621567cbfe4af775c7eb87b18db8 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 2.4E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VS_0917 ff31621567cbfe4af775c7eb87b18db8 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.583 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VS_0917 ff31621567cbfe4af775c7eb87b18db8 109 Gene3D G3DSA:3.30.1310.10 1 109 7.2E-48 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VS_1761 5368b8430278dcb891f06895380765a6 258 SUPERFAMILY SSF53474 2 255 1.42E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1761 5368b8430278dcb891f06895380765a6 258 Pfam PF00561 alpha/beta hydrolase fold 20 152 7.3E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_1761 5368b8430278dcb891f06895380765a6 258 Gene3D G3DSA:3.40.50.1820 2 255 1.7E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0564 548b1575544329344136ab706c10aa5c 398 SUPERFAMILY SSF63380 154 261 3.4E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_II0564 548b1575544329344136ab706c10aa5c 398 Pfam PF00175 Oxidoreductase NAD-binding domain 270 373 3.0E-12 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 Gene3D G3DSA:1.10.490.10 1 144 2.8E-52 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VS_II0564 548b1575544329344136ab706c10aa5c 398 SUPERFAMILY SSF52343 262 395 7.33E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0564 548b1575544329344136ab706c10aa5c 398 Pfam PF00042 Globin 8 99 5.7E-13 T 14-10-2018 IPR000971 Globin GO:0020037 VS_II0564 548b1575544329344136ab706c10aa5c 398 Pfam PF00970 Oxidoreductase FAD-binding domain 158 261 4.8E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VS_II0564 548b1575544329344136ab706c10aa5c 398 SUPERFAMILY SSF46458 3 143 1.28E-38 T 14-10-2018 IPR009050 Globin-like superfamily VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 8.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 8.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 269 288 8.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 360 368 8.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 234 243 8.7E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 Gene3D G3DSA:2.40.30.10 153 261 5.6E-35 T 14-10-2018 VS_II0564 548b1575544329344136ab706c10aa5c 398 Gene3D G3DSA:3.40.50.80 262 397 3.0E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 3.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00410 Phenol hydroxylase reductase family signature 269 288 3.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_II0564 548b1575544329344136ab706c10aa5c 398 PRINTS PR00410 Phenol hydroxylase reductase family signature 360 368 3.6E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 30 1377 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:2.40.50.100 959 1032 2.5E-23 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:1.10.1790.20 1146 1324 7.9E-62 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 SUPERFAMILY SSF64484 27 1375 0.0 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:1.10.132.30 652 801 2.3E-65 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Pfam PF04997 RNA polymerase Rpb1, domain 1 26 353 1.7E-89 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Pfam PF04983 RNA polymerase Rpb1, domain 3 500 655 6.7E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Pfam PF00623 RNA polymerase Rpb1, domain 2 399 496 1.1E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Pfam PF00623 RNA polymerase Rpb1, domain 2 355 406 5.8E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 SMART SM00663 246 525 2.1E-185 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:2.40.50.100 1033 1137 1.9E-28 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Pfam PF04998 RNA polymerase Rpb1, domain 5 777 1325 1.9E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:2.40.50.100 1162 1225 7.9E-62 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 21 1387 18.9 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:1.10.40.90 385 427 6.6E-22 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Pfam PF05000 RNA polymerase Rpb1, domain 4 685 774 5.5E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:1.10.150.390 1326 1387 8.1E-29 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:1.10.274.100 501 574 2.1E-23 T 14-10-2018 VS_2962 8098ecd38723532cde7a5453a51f0f17 1411 Gene3D G3DSA:1.10.274.100 575 651 7.9E-15 T 14-10-2018 VS_1984 ab44a9537e88125158114d892294e4e5 340 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 100 5.2E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_1984 ab44a9537e88125158114d892294e4e5 340 Gene3D G3DSA:1.10.10.10 2 120 3.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1984 ab44a9537e88125158114d892294e4e5 340 SUPERFAMILY SSF46894 18 100 2.55E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_1984 ab44a9537e88125158114d892294e4e5 340 SMART SM00862 25 100 6.5E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SMART SM00564 192 223 85.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SMART SM00564 243 274 1.2 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SMART SM00564 147 178 1.1E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SMART SM00564 322 353 2.1 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SMART SM00564 107 138 2.8E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SMART SM00564 281 312 1.6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SMART SM00564 63 94 3.2E-7 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 1.4E-141 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.233 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 SUPERFAMILY SSF50998 30 375 3.73E-87 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 Gene3D G3DSA:2.130.10.10 18 385 1.2E-101 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_0622 5d6489ca2061aa6fd826a04498cb1540 386 Pfam PF13360 PQQ-like domain 76 310 1.7E-54 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VS_II1470 4590fd91a609d789af980b7a9d80c980 492 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 476 9.2E-182 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VS_II1470 4590fd91a609d789af980b7a9d80c980 492 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 382 466 3.3E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VS_II1470 4590fd91a609d789af980b7a9d80c980 492 SUPERFAMILY SSF55604 406 478 8.24E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_II1470 4590fd91a609d789af980b7a9d80c980 492 Pfam PF00367 phosphotransferase system, EIIB 409 441 1.8E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_II1470 4590fd91a609d789af980b7a9d80c980 492 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 419 436 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_II1470 4590fd91a609d789af980b7a9d80c980 492 Gene3D G3DSA:3.30.1360.60 401 482 1.6E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_II1470 4590fd91a609d789af980b7a9d80c980 492 Pfam PF02378 Phosphotransferase system, EIIC 11 321 5.5E-75 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 Gene3D G3DSA:3.40.640.10 48 315 1.9E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 SUPERFAMILY SSF53383 3 395 5.34E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.9E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.9E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.9E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.9E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 Pfam PF00155 Aminotransferase class I and II 29 392 1.1E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_II0715 6b3aaa7f7779202f0446e556bcc9f1c0 397 Gene3D G3DSA:3.90.1150.10 14 392 1.9E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 Gene3D G3DSA:1.20.120.530 90 231 1.4E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 SMART SM00895 97 224 1.2E-23 T 14-10-2018 IPR011711 GntR, C-terminal VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 2.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 Gene3D G3DSA:1.10.10.10 5 88 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 Pfam PF07729 FCD domain 97 222 1.2E-26 T 14-10-2018 IPR011711 GntR, C-terminal VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 SMART SM00345 29 87 5.8E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 SUPERFAMILY SSF48008 93 226 3.66E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1342 818fec6637d56f8d464f54c370bd3d8f 239 SUPERFAMILY SSF46785 23 115 6.18E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2830 a5772c578e32e1018f0d824ebc1bae69 100 Gene3D G3DSA:3.30.70.330 1 100 4.8E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VS_2830 a5772c578e32e1018f0d824ebc1bae69 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.715 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VS_2830 a5772c578e32e1018f0d824ebc1bae69 100 SUPERFAMILY SSF54189 4 92 7.91E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2830 a5772c578e32e1018f0d824ebc1bae69 100 Pfam PF00276 Ribosomal protein L23 9 95 7.9E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VS_2830 a5772c578e32e1018f0d824ebc1bae69 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_II0920 c8e4631743479315aa8060340de3fa1d 476 Gene3D G3DSA:1.20.1600.10 53 476 8.4E-91 T 14-10-2018 VS_II0920 c8e4631743479315aa8060340de3fa1d 476 SUPERFAMILY SSF56954 25 465 2.22E-78 T 14-10-2018 VS_II0920 c8e4631743479315aa8060340de3fa1d 476 Pfam PF02321 Outer membrane efflux protein 54 237 1.1E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0920 c8e4631743479315aa8060340de3fa1d 476 Pfam PF02321 Outer membrane efflux protein 265 458 2.2E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0920 c8e4631743479315aa8060340de3fa1d 476 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 53 473 3.3E-75 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 Gene3D G3DSA:3.40.50.2300 1 122 1.6E-35 T 14-10-2018 VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 SMART SM00448 1 112 1.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 SUPERFAMILY SSF46894 119 217 1.5E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 Pfam PF00072 Response regulator receiver domain 3 113 1.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 Gene3D G3DSA:1.10.10.10 123 219 2.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 SUPERFAMILY SSF52172 1 118 4.7E-36 T 14-10-2018 IPR011006 CheY-like superfamily VS_1857 56119afd7e9585cee6e0f3fe8c14e9a4 219 SMART SM00862 145 216 7.1E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0975 20f0c5cc65918842abefbfd22685114c 663 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 1 177 3.7E-77 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VS_0975 20f0c5cc65918842abefbfd22685114c 663 Pfam PF12838 4Fe-4S dicluster domain 107 159 1.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_0975 20f0c5cc65918842abefbfd22685114c 663 Gene3D G3DSA:1.10.1060.10 93 174 8.4E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_0975 20f0c5cc65918842abefbfd22685114c 663 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 488 133.233 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VS_0975 20f0c5cc65918842abefbfd22685114c 663 SUPERFAMILY SSF46548 66 174 1.29E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_0975 20f0c5cc65918842abefbfd22685114c 663 Pfam PF10531 SLBB domain 25 74 6.3E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_0975 20f0c5cc65918842abefbfd22685114c 663 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_II0931 ab9fb29822ba2edd21430e9c347aedc1 397 Pfam PF04966 Carbohydrate-selective porin, OprB family 225 397 3.2E-17 T 14-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 VS_II0931 ab9fb29822ba2edd21430e9c347aedc1 397 Gene3D G3DSA:2.40.160.180 23 397 1.7E-37 T 14-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily VS_II0480 e5d6ae5806012c8cd6237d87c0d94eb7 438 Pfam PF00092 von Willebrand factor type A domain 276 356 3.3E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_II0480 e5d6ae5806012c8cd6237d87c0d94eb7 438 SUPERFAMILY SSF53300 148 429 3.97E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_0967 11bbb4e6b7b0043125142837a4eb7d16 241 Gene3D G3DSA:3.30.420.10 36 241 4.0E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_0967 11bbb4e6b7b0043125142837a4eb7d16 241 SUPERFAMILY SSF53098 37 235 9.76E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_0967 11bbb4e6b7b0043125142837a4eb7d16 241 Hamap MF_00157 Ribonuclease T [rnt]. 1 241 122.908 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VS_0967 11bbb4e6b7b0043125142837a4eb7d16 241 Pfam PF00929 Exonuclease 47 222 1.6E-42 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_0967 11bbb4e6b7b0043125142837a4eb7d16 241 TIGRFAM TIGR01298 RNaseT: ribonuclease T 37 236 4.8E-99 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VS_0967 11bbb4e6b7b0043125142837a4eb7d16 241 SMART SM00479 45 231 5.4E-28 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 SUPERFAMILY SSF47729 21 110 2.06E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 Pfam PF00216 Bacterial DNA-binding protein 21 110 2.1E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 SMART SM00411 21 110 6.8E-45 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 66 85 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 PRINTS PR01727 Prokaryotic integration host factor signature 78 91 3.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 PRINTS PR01727 Prokaryotic integration host factor signature 60 75 3.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 PRINTS PR01727 Prokaryotic integration host factor signature 94 108 3.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_2954 50ffe0e9a260e2ce9458cc2c75efb245 110 Gene3D G3DSA:4.10.520.10 21 110 8.0E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_0405 1c54a4741ca1d01a11179489633a9059 160 Gene3D G3DSA:3.30.70.560 1 154 3.4E-30 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_0405 1c54a4741ca1d01a11179489633a9059 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 1.7E-22 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_0405 1c54a4741ca1d01a11179489633a9059 160 SUPERFAMILY SSF55083 1 149 7.85E-37 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_0405 1c54a4741ca1d01a11179489633a9059 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 6.1E-28 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_2918 338e40f3a7725a12c0840be18d222706 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 4.1E-27 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 1.5E-39 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 SUPERFAMILY SSF46609 1 85 8.38E-29 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 Gene3D G3DSA:2.40.500.20 84 201 4.7E-48 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 SUPERFAMILY SSF54719 87 201 2.23E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 8.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 8.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 8.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 8.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 8.9E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 Gene3D G3DSA:1.10.287.990 20 83 4.5E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2918 338e40f3a7725a12c0840be18d222706 205 PIRSF PIRSF000349 1 205 1.0E-78 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2755 f2c8a219f0332a8057d96b1273dfb1fc 175 Gene3D G3DSA:2.60.450.10 31 168 3.4E-41 T 14-10-2018 VS_2755 f2c8a219f0332a8057d96b1273dfb1fc 175 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 31 170 5.4E-47 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VS_2755 f2c8a219f0332a8057d96b1273dfb1fc 175 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 12 171 24.162 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VS_2755 f2c8a219f0332a8057d96b1273dfb1fc 175 Pfam PF03968 OstA-like protein 41 152 1.3E-28 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VS_II1043 b8a5b92ecaafc55d92518d13e21ff76f 430 SUPERFAMILY SSF47384 217 297 1.22E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II1043 b8a5b92ecaafc55d92518d13e21ff76f 430 Gene3D G3DSA:3.30.565.10 299 430 9.5E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1043 b8a5b92ecaafc55d92518d13e21ff76f 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 297 1.9E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1043 b8a5b92ecaafc55d92518d13e21ff76f 430 Gene3D G3DSA:1.10.287.130 180 296 1.9E-14 T 14-10-2018 VS_II1043 b8a5b92ecaafc55d92518d13e21ff76f 430 SMART SM00388 233 300 2.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1043 b8a5b92ecaafc55d92518d13e21ff76f 430 SUPERFAMILY SSF55874 303 420 3.01E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1043 b8a5b92ecaafc55d92518d13e21ff76f 430 Pfam PF14501 GHKL domain 312 430 8.9E-6 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain VS_II0063 278e4413694646e0b5af33f3b7f526a6 218 Pfam PF00805 Pentapeptide repeats (8 copies) 17 48 1.1E-5 T 14-10-2018 IPR001646 Pentapeptide repeat VS_II0063 278e4413694646e0b5af33f3b7f526a6 218 Pfam PF00805 Pentapeptide repeats (8 copies) 62 96 1.4E-7 T 14-10-2018 IPR001646 Pentapeptide repeat VS_II0063 278e4413694646e0b5af33f3b7f526a6 218 Gene3D G3DSA:2.160.20.80 3 217 1.3E-58 T 14-10-2018 VS_II0063 278e4413694646e0b5af33f3b7f526a6 218 SUPERFAMILY SSF141571 18 199 1.18E-39 T 14-10-2018 VS_II0063 278e4413694646e0b5af33f3b7f526a6 218 Pfam PF13599 Pentapeptide repeats (9 copies) 97 166 5.8E-9 T 14-10-2018 IPR001646 Pentapeptide repeat VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 SMART SM01049 42 133 7.0E-35 T 14-10-2018 IPR033480 Single Cache domain 2 VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 Pfam PF07730 Histidine kinase 250 315 1.7E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 SUPERFAMILY SSF55874 323 443 1.05E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 Pfam PF17200 Single Cache domain 2 45 192 3.7E-46 T 14-10-2018 IPR033480 Single Cache domain 2 VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 Gene3D G3DSA:3.30.565.10 313 447 5.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 Gene3D G3DSA:3.30.450.20 29 203 6.7E-51 T 14-10-2018 VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 445 4.8E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 SMART SM00387 353 447 2.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1911 ff6a881f3722546f77f0b6d09ed171e5 451 PIRSF PIRSF037314 1 451 1.0E-180 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS VS_1352 756cbe551707b639041c52dee1889704 280 Pfam PF08282 haloacid dehalogenase-like hydrolase 16 273 4.0E-65 T 14-10-2018 VS_1352 756cbe551707b639041c52dee1889704 280 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 15 273 1.6E-60 T 14-10-2018 IPR000150 Cof family GO:0016787 VS_1352 756cbe551707b639041c52dee1889704 280 ProSitePatterns PS01229 Hypothetical cof family signature 2. 227 249 - T 14-10-2018 VS_1352 756cbe551707b639041c52dee1889704 280 Gene3D G3DSA:3.30.1240.10 97 202 2.1E-79 T 14-10-2018 VS_1352 756cbe551707b639041c52dee1889704 280 SUPERFAMILY SSF56784 7 277 2.07E-74 T 14-10-2018 IPR036412 HAD-like superfamily VS_1352 756cbe551707b639041c52dee1889704 280 Gene3D G3DSA:3.40.50.1000 14 274 2.1E-79 T 14-10-2018 IPR023214 HAD superfamily VS_1352 756cbe551707b639041c52dee1889704 280 ProSitePatterns PS01228 Hypothetical cof family signature 1. 15 26 - T 14-10-2018 VS_1352 756cbe551707b639041c52dee1889704 280 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 15 246 3.7E-26 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.538 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 Gene3D G3DSA:3.40.50.620 9 384 2.3E-162 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 1.4E-201 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 Gene3D G3DSA:2.40.50.140 575 686 2.9E-34 T 14-10-2018 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 554 685 2.6E-46 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 Gene3D G3DSA:2.20.28.20 142 176 2.3E-162 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 Pfam PF09334 tRNA synthetases class I (M) 9 396 7.6E-166 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.9E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.9E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.9E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.9E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.9E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.9E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 SUPERFAMILY SSF57770 142 176 4.19E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 Pfam PF01588 Putative tRNA binding domain 591 683 6.4E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 SUPERFAMILY SSF50249 584 685 3.67E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 Gene3D G3DSA:1.10.730.10 389 526 9.7E-36 T 14-10-2018 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 SUPERFAMILY SSF52374 5 387 1.44E-101 T 14-10-2018 VS_1009 3d0abe8a7407db2deace1fd8a9f3bd37 686 SUPERFAMILY SSF47323 389 547 1.48E-44 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2030 7beb4877a47844075a167eaa110233e9 434 Pfam PF00294 pfkB family carbohydrate kinase 74 293 3.7E-12 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VS_2030 7beb4877a47844075a167eaa110233e9 434 SUPERFAMILY SSF53613 31 417 8.57E-45 T 14-10-2018 IPR029056 Ribokinase-like VS_II1028 e1d113ceb5732ae60c03ff9df300fb4d 114 Gene3D G3DSA:2.102.10.10 1 108 4.4E-32 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_II1028 e1d113ceb5732ae60c03ff9df300fb4d 114 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 1.8E-32 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VS_II1028 e1d113ceb5732ae60c03ff9df300fb4d 114 SUPERFAMILY SSF50022 1 108 1.16E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_II1028 e1d113ceb5732ae60c03ff9df300fb4d 114 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 6.4E-37 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VS_2539 b3ffd436d2a5a4726a07a6e66987aebc 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2539 b3ffd436d2a5a4726a07a6e66987aebc 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2539 b3ffd436d2a5a4726a07a6e66987aebc 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2539 b3ffd436d2a5a4726a07a6e66987aebc 201 SUPERFAMILY SSF46689 8 83 2.15E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2539 b3ffd436d2a5a4726a07a6e66987aebc 201 SUPERFAMILY SSF48498 89 197 1.4E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_2539 b3ffd436d2a5a4726a07a6e66987aebc 201 Gene3D G3DSA:1.10.357.10 1 201 3.3E-82 T 14-10-2018 VS_II0252 5d5ee9eb80e8760d5ddc7b3ba6bbb71d 403 SUPERFAMILY SSF102114 149 359 2.35E-29 T 14-10-2018 VS_II0252 5d5ee9eb80e8760d5ddc7b3ba6bbb71d 403 Pfam PF04055 Radical SAM superfamily 163 310 2.1E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_II0252 5d5ee9eb80e8760d5ddc7b3ba6bbb71d 403 SMART SM00729 159 367 7.0E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_II0252 5d5ee9eb80e8760d5ddc7b3ba6bbb71d 403 Gene3D G3DSA:3.80.30.20 159 359 1.5E-21 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VS_0089 d307f5828a98740a64ae9dfb52b41202 292 Pfam PF00892 EamA-like transporter family 139 275 8.6E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_0089 d307f5828a98740a64ae9dfb52b41202 292 SUPERFAMILY SSF103481 35 130 8.11E-6 T 14-10-2018 VS_0089 d307f5828a98740a64ae9dfb52b41202 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 3.4E-73 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VS_0089 d307f5828a98740a64ae9dfb52b41202 292 SUPERFAMILY SSF103481 184 275 9.81E-6 T 14-10-2018 VS_II0758 77975b41a93f8dc02409414bee38941a 224 SUPERFAMILY SSF52540 5 223 2.06E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0758 77975b41a93f8dc02409414bee38941a 224 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0758 77975b41a93f8dc02409414bee38941a 224 Gene3D G3DSA:3.40.50.300 3 224 2.8E-68 T 14-10-2018 VS_II0758 77975b41a93f8dc02409414bee38941a 224 Pfam PF00005 ABC transporter 25 171 2.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0758 77975b41a93f8dc02409414bee38941a 224 SMART SM00382 34 222 6.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1547 7b25fc2a5133ce5f4067509d2f65839e 223 Pfam PF13302 Acetyltransferase (GNAT) domain 49 188 9.6E-19 T 14-10-2018 IPR000182 GNAT domain VS_1547 7b25fc2a5133ce5f4067509d2f65839e 223 SUPERFAMILY SSF55729 42 212 1.95E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1547 7b25fc2a5133ce5f4067509d2f65839e 223 Gene3D G3DSA:3.40.630.30 33 221 2.0E-41 T 14-10-2018 VS_2846 50e5e2dbd0d77eaafd68543bd6f1cef7 196 Gene3D G3DSA:2.40.10.330 71 121 1.7E-60 T 14-10-2018 VS_2846 50e5e2dbd0d77eaafd68543bd6f1cef7 196 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.1E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VS_2846 50e5e2dbd0d77eaafd68543bd6f1cef7 196 Gene3D G3DSA:3.10.50.40 3 154 1.7E-60 T 14-10-2018 VS_2846 50e5e2dbd0d77eaafd68543bd6f1cef7 196 SUPERFAMILY SSF54534 2 140 3.14E-36 T 14-10-2018 VS_2642 0a8896034e153c1be1f4687b0631fced 299 Gene3D G3DSA:1.10.10.10 2 86 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2642 0a8896034e153c1be1f4687b0631fced 299 Gene3D G3DSA:3.40.190.290 91 297 4.9E-65 T 14-10-2018 VS_2642 0a8896034e153c1be1f4687b0631fced 299 SUPERFAMILY SSF53850 96 295 7.06E-23 T 14-10-2018 VS_2642 0a8896034e153c1be1f4687b0631fced 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2642 0a8896034e153c1be1f4687b0631fced 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2642 0a8896034e153c1be1f4687b0631fced 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2642 0a8896034e153c1be1f4687b0631fced 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2642 0a8896034e153c1be1f4687b0631fced 299 SUPERFAMILY SSF46785 5 113 3.49E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2642 0a8896034e153c1be1f4687b0631fced 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 296 1.8E-107 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VS_2642 0a8896034e153c1be1f4687b0631fced 299 Pfam PF03466 LysR substrate binding domain 96 276 7.9E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2642 0a8896034e153c1be1f4687b0631fced 299 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 2 299 55.769 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VS_1831 6c6c6ce1fbce2e2138bf1c43a4dadcdc 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 1.0E-71 T 14-10-2018 IPR005642 Lysine exporter LysO VS_1831 6c6c6ce1fbce2e2138bf1c43a4dadcdc 301 Pfam PF03956 Lysine exporter LysO 112 297 2.1E-53 T 14-10-2018 IPR005642 Lysine exporter LysO VS_0938 49e7fb414415004236c287dd14c64781 670 Gene3D G3DSA:3.20.20.70 5 371 4.6E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0938 49e7fb414415004236c287dd14c64781 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 331 3.0E-83 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VS_0938 49e7fb414415004236c287dd14c64781 670 SUPERFAMILY SSF51395 3 365 6.02E-109 T 14-10-2018 VS_0938 49e7fb414415004236c287dd14c64781 670 SUPERFAMILY SSF51905 377 646 6.89E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0938 49e7fb414415004236c287dd14c64781 670 Gene3D G3DSA:3.40.50.720 378 664 5.4E-107 T 14-10-2018 VS_0938 49e7fb414415004236c287dd14c64781 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 629 1.8E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_0938 49e7fb414415004236c287dd14c64781 670 Gene3D G3DSA:3.50.50.60 472 623 5.4E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0938 49e7fb414415004236c287dd14c64781 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 399 2.3E-9 T 14-10-2018 VS_0938 49e7fb414415004236c287dd14c64781 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 2.3E-9 T 14-10-2018 VS_0938 49e7fb414415004236c287dd14c64781 670 SUPERFAMILY SSF51971 336 519 7.42E-41 T 14-10-2018 VS_II0923 eca4c3b3b13bc554b248bfb8c1e2c5f2 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 98 1.4E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0923 eca4c3b3b13bc554b248bfb8c1e2c5f2 242 Gene3D G3DSA:1.10.10.10 10 104 3.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0923 eca4c3b3b13bc554b248bfb8c1e2c5f2 242 SUPERFAMILY SSF46894 26 99 9.35E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0923 eca4c3b3b13bc554b248bfb8c1e2c5f2 242 SMART SM00862 26 99 2.5E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 SUPERFAMILY SSF53850 11 228 2.07E-65 T 14-10-2018 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 Gene3D G3DSA:3.40.190.10 12 225 1.5E-67 T 14-10-2018 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 SUPERFAMILY SSF54913 231 303 1.67E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 Pfam PF08029 HisG, C-terminal domain 228 301 1.9E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 11 304 34.995 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 Gene3D G3DSA:3.30.70.120 231 303 2.7E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 Gene3D G3DSA:3.40.190.10 108 197 1.5E-67 T 14-10-2018 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 210 303 1.7E-30 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 161 182 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 12 202 1.5E-53 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VS_2026 8cca010dd8beccf104e1c6261017e3d5 304 Pfam PF01634 ATP phosphoribosyltransferase 59 224 8.2E-45 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VS_II1366 55a600fd807aa89c8d8b539d10111ace 305 SUPERFAMILY SSF103481 190 289 1.96E-6 T 14-10-2018 VS_II1366 55a600fd807aa89c8d8b539d10111ace 305 SUPERFAMILY SSF103481 40 141 1.24E-12 T 14-10-2018 VS_II1366 55a600fd807aa89c8d8b539d10111ace 305 Pfam PF00892 EamA-like transporter family 153 286 2.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1366 55a600fd807aa89c8d8b539d10111ace 305 Pfam PF00892 EamA-like transporter family 7 139 3.1E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_0685 011f64d84c38202038a13613ab244906 295 SUPERFAMILY SSF111364 54 295 6.02E-80 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VS_0685 011f64d84c38202038a13613ab244906 295 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 54 295 8.2E-91 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VS_0685 011f64d84c38202038a13613ab244906 295 Gene3D G3DSA:2.40.230.20 47 295 8.0E-73 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VS_1643 0ca137eccb4f2a77774a5c8f2bbc8ab4 559 Gene3D G3DSA:3.40.50.300 405 559 2.8E-14 T 14-10-2018 VS_1643 0ca137eccb4f2a77774a5c8f2bbc8ab4 559 Pfam PF08378 Nuclease-related domain 18 124 8.2E-13 T 14-10-2018 IPR011528 Nuclease-related domain, NERD VS_1643 0ca137eccb4f2a77774a5c8f2bbc8ab4 559 SUPERFAMILY SSF52540 219 557 6.26E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1643 0ca137eccb4f2a77774a5c8f2bbc8ab4 559 Gene3D G3DSA:3.40.50.300 218 399 1.6E-20 T 14-10-2018 VS_1643 0ca137eccb4f2a77774a5c8f2bbc8ab4 559 Pfam PF13245 AAA domain 239 389 3.5E-6 T 14-10-2018 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 353 497 1.6E-36 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 307 327 1.8E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 362 373 1.8E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 341 357 1.8E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 424 440 1.8E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Pfam PF03413 Peptidase propeptide and YPEB domain 116 190 1.5E-10 T 14-10-2018 IPR025711 PepSY domain VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Gene3D G3DSA:3.10.450.40 112 195 1.5E-25 T 14-10-2018 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Gene3D G3DSA:1.10.390.10 355 504 9.9E-49 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Gene3D G3DSA:2.60.120.380 508 607 2.1E-39 T 14-10-2018 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 SUPERFAMILY SSF55486 201 499 1.1E-83 T 14-10-2018 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 SUPERFAMILY SSF89260 507 604 1.23E-6 T 14-10-2018 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 529 587 7.4E-11 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 209 350 2.1E-36 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Gene3D G3DSA:3.10.170.10 198 354 4.0E-60 T 14-10-2018 VS_1267 8d5d8408a70a8749608d8daa49a62ae3 607 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 55 101 2.6E-10 T 14-10-2018 IPR011096 FTP domain VS_0066 4fda8856c7e7a92c495eb5990001b011 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.9E-77 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VS_0066 4fda8856c7e7a92c495eb5990001b011 672 Gene3D G3DSA:1.10.486.10 377 546 7.5E-126 T 14-10-2018 VS_0066 4fda8856c7e7a92c495eb5990001b011 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 6.7E-75 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VS_0066 4fda8856c7e7a92c495eb5990001b011 672 Gene3D G3DSA:3.40.50.300 4 266 4.6E-99 T 14-10-2018 VS_0066 4fda8856c7e7a92c495eb5990001b011 672 Gene3D G3DSA:3.40.50.300 274 634 7.5E-126 T 14-10-2018 VS_0066 4fda8856c7e7a92c495eb5990001b011 672 SUPERFAMILY SSF52540 1 641 1.4E-164 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0066 4fda8856c7e7a92c495eb5990001b011 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VS_0066 4fda8856c7e7a92c495eb5990001b011 672 Gene3D G3DSA:1.10.10.160 108 181 4.6E-99 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VS_0066 4fda8856c7e7a92c495eb5990001b011 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.897 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VS_II0567 7836cd1fb6b1a0b52573660d5c03bc0b 327 SUPERFAMILY SSF52540 3 169 1.23E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0567 7836cd1fb6b1a0b52573660d5c03bc0b 327 Gene3D G3DSA:3.40.50.300 2 199 6.6E-46 T 14-10-2018 VS_II0567 7836cd1fb6b1a0b52573660d5c03bc0b 327 SMART SM00833 241 324 0.006 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VS_II0567 7836cd1fb6b1a0b52573660d5c03bc0b 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 178 7.0E-42 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 1.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 1.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 SMART SM00342 154 238 2.5E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 SUPERFAMILY SSF46689 191 241 2.55E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 234 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 Gene3D G3DSA:1.10.10.60 187 244 8.3E-19 T 14-10-2018 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 SUPERFAMILY SSF46689 142 187 3.85E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 Gene3D G3DSA:1.10.10.60 137 186 3.3E-9 T 14-10-2018 VS_2448 09c153f08041b74c38b90e3c6fc3d268 249 Pfam PF12833 Helix-turn-helix domain 160 239 7.0E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0095 b903b48d6b1a23dda19060a4c82d58b8 129 Gene3D G3DSA:3.10.180.10 1 129 1.7E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II0095 b903b48d6b1a23dda19060a4c82d58b8 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 2.2E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_II0095 b903b48d6b1a23dda19060a4c82d58b8 129 SUPERFAMILY SSF54593 1 128 2.69E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 SUPERFAMILY SSF81333 3 78 1.83E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.579 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 Gene3D G3DSA:1.20.20.10 2 77 2.7E-28 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.7E-30 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VS_3157 7294931bd83105a5d2e45ffc9c03c8f7 85 Pfam PF00137 ATP synthase subunit C 10 72 3.9E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 SUPERFAMILY SSF75620 2 302 2.75E-125 T 14-10-2018 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 301 9.8E-151 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 Pfam PF00472 RF-1 domain 166 275 1.3E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 SMART SM00937 23 133 8.0E-56 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 303 32.526 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 Gene3D G3DSA:3.30.160.20 164 259 3.9E-95 T 14-10-2018 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 183 199 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 Pfam PF03462 PCRF domain 1 157 1.0E-49 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 Gene3D G3DSA:1.20.58.410 1 54 1.0E-12 T 14-10-2018 VS_0516 e8fafadabd4336cd3c2586adb1833f79 303 Gene3D G3DSA:3.30.70.1660 68 296 3.9E-95 T 14-10-2018 VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 Gene3D G3DSA:1.10.8.10 6 90 9.2E-24 T 14-10-2018 VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 12 288 1.3E-76 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 284 4.1E-89 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 Gene3D G3DSA:3.40.50.150 91 289 3.8E-56 T 14-10-2018 VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 Pfam PF13847 Methyltransferase domain 117 253 6.5E-17 T 14-10-2018 IPR025714 Methyltransferase domain VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 SUPERFAMILY SSF53335 8 288 1.88E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 288 43.602 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VS_0753 7b9f31682037d0d4a7e2005c5cddbd0a 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 193 199 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_0608 40f451719a8213714f670fd842113490 125 Pfam PF01592 NifU-like N terminal domain 2 124 1.2E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VS_0608 40f451719a8213714f670fd842113490 125 Gene3D G3DSA:3.90.1010.10 1 125 1.6E-58 T 14-10-2018 VS_0608 40f451719a8213714f670fd842113490 125 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 124 2.3E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VS_0608 40f451719a8213714f670fd842113490 125 SUPERFAMILY SSF82649 1 125 1.2E-47 T 14-10-2018 VS_1642 a33e516658e52ec3adc8aa7e61e13e99 419 Pfam PF00709 Adenylosuccinate synthetase 4 416 5.5E-134 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_1642 a33e516658e52ec3adc8aa7e61e13e99 419 Gene3D G3DSA:3.90.170.10 266 419 2.3E-51 T 14-10-2018 VS_1642 a33e516658e52ec3adc8aa7e61e13e99 419 SUPERFAMILY SSF52540 1 418 1.91E-122 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1642 a33e516658e52ec3adc8aa7e61e13e99 419 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 419 144.472 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_1642 a33e516658e52ec3adc8aa7e61e13e99 419 SMART SM00788 3 417 2.9E-183 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VS_1642 a33e516658e52ec3adc8aa7e61e13e99 419 Gene3D G3DSA:3.40.440.10 6 255 6.3E-75 T 14-10-2018 VS_1642 a33e516658e52ec3adc8aa7e61e13e99 419 Gene3D G3DSA:1.10.300.10 99 200 6.3E-75 T 14-10-2018 VS_II0510 b97b0643b7ed4f03cacc8a3ac173611c 750 Pfam PF00005 ABC transporter 485 637 2.2E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0510 b97b0643b7ed4f03cacc8a3ac173611c 750 SUPERFAMILY SSF52540 457 691 4.66E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0510 b97b0643b7ed4f03cacc8a3ac173611c 750 Gene3D G3DSA:3.40.50.300 462 703 9.0E-45 T 14-10-2018 VS_II0510 b97b0643b7ed4f03cacc8a3ac173611c 750 Gene3D G3DSA:1.20.1560.10 143 454 1.4E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0510 b97b0643b7ed4f03cacc8a3ac173611c 750 Pfam PF00664 ABC transporter transmembrane region 156 420 2.4E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0510 b97b0643b7ed4f03cacc8a3ac173611c 750 SMART SM00382 494 683 2.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0510 b97b0643b7ed4f03cacc8a3ac173611c 750 SUPERFAMILY SSF90123 140 451 4.97E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_0242 389c7bde2eef5c93263492a8997a8892 162 PRINTS PR01837 MgtC/SapB protein signature 22 41 3.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VS_0242 389c7bde2eef5c93263492a8997a8892 162 PRINTS PR01837 MgtC/SapB protein signature 41 59 3.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VS_0242 389c7bde2eef5c93263492a8997a8892 162 PRINTS PR01837 MgtC/SapB protein signature 68 90 3.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VS_0242 389c7bde2eef5c93263492a8997a8892 162 PRINTS PR01837 MgtC/SapB protein signature 95 119 3.1E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VS_0242 389c7bde2eef5c93263492a8997a8892 162 Pfam PF02308 MgtC family 19 141 8.6E-28 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VS_0986 011b6598ba1d399b5215f6492d1067d4 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 7.7E-84 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 VS_0986 011b6598ba1d399b5215f6492d1067d4 170 Pfam PF00994 Probable molybdopterin binding domain 14 155 8.9E-34 T 14-10-2018 IPR001453 MoaB/Mog domain VS_0986 011b6598ba1d399b5215f6492d1067d4 170 SMART SM00852 14 158 2.2E-27 T 14-10-2018 IPR001453 MoaB/Mog domain VS_0986 011b6598ba1d399b5215f6492d1067d4 170 Gene3D G3DSA:3.40.980.10 2 170 4.9E-51 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_0986 011b6598ba1d399b5215f6492d1067d4 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VS_0986 011b6598ba1d399b5215f6492d1067d4 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 5.1E-37 T 14-10-2018 IPR001453 MoaB/Mog domain VS_0986 011b6598ba1d399b5215f6492d1067d4 170 PIRSF PIRSF006443 1 166 5.9E-67 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VS_0986 011b6598ba1d399b5215f6492d1067d4 170 SUPERFAMILY SSF53218 7 168 1.83E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_1869 0e1e6f3c782152df08d6f12d25302f67 388 Pfam PF02371 Transposase IS116/IS110/IS902 family 231 305 8.0E-21 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VS_1869 0e1e6f3c782152df08d6f12d25302f67 388 Pfam PF01548 Transposase 13 161 2.6E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VS_II0304 ce7065daa0332fb0e56562131b890fba 298 Pfam PF03466 LysR substrate binding domain 88 289 1.5E-28 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0304 ce7065daa0332fb0e56562131b890fba 298 Gene3D G3DSA:3.40.190.10 164 261 2.1E-40 T 14-10-2018 VS_II0304 ce7065daa0332fb0e56562131b890fba 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 2.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0304 ce7065daa0332fb0e56562131b890fba 298 SUPERFAMILY SSF53850 90 292 2.17E-30 T 14-10-2018 VS_II0304 ce7065daa0332fb0e56562131b890fba 298 SUPERFAMILY SSF46785 10 88 2.67E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0304 ce7065daa0332fb0e56562131b890fba 298 Gene3D G3DSA:3.40.190.10 92 286 2.1E-40 T 14-10-2018 VS_II0304 ce7065daa0332fb0e56562131b890fba 298 Gene3D G3DSA:1.10.10.10 4 91 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 12 113 1.7E-8 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 Gene3D G3DSA:3.20.20.120 122 328 1.4E-57 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 Gene3D G3DSA:3.30.390.10 1 111 2.5E-25 T 14-10-2018 IPR029017 Enolase-like, N-terminal VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 SUPERFAMILY SSF54826 2 114 8.25E-23 T 14-10-2018 VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 Pfam PF13378 Enolase C-terminal domain-like 140 326 1.0E-28 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 SUPERFAMILY SSF51604 125 323 1.57E-52 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VS_II1294 e43623f7cc30417033fff9bdba5783c3 328 SMART SM00922 137 230 1.7E-18 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VS_1703 e97dfba12c69581a682d1c52e48cfd70 203 SMART SM00903 19 166 5.3E-4 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VS_1703 e97dfba12c69581a682d1c52e48cfd70 203 SUPERFAMILY SSF50475 5 198 2.4E-34 T 14-10-2018 VS_1703 e97dfba12c69581a682d1c52e48cfd70 203 Pfam PF01613 Flavin reductase like domain 22 163 1.4E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VS_1703 e97dfba12c69581a682d1c52e48cfd70 203 Gene3D G3DSA:2.30.110.10 1 203 6.3E-60 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VS_1937 b1a4ef22ae6be11e77d879176187ed16 237 Gene3D G3DSA:3.40.50.150 11 235 1.6E-73 T 14-10-2018 VS_1937 b1a4ef22ae6be11e77d879176187ed16 237 SUPERFAMILY SSF53335 15 215 2.48E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1937 b1a4ef22ae6be11e77d879176187ed16 237 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.035 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VS_1937 b1a4ef22ae6be11e77d879176187ed16 237 Pfam PF13489 Methyltransferase domain 52 193 1.2E-22 T 14-10-2018 VS_1937 b1a4ef22ae6be11e77d879176187ed16 237 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 3.9E-87 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VS_II1404 605008e5480b65c90dad346385b0d555 329 Gene3D G3DSA:3.30.70.100 1 96 1.0E-34 T 14-10-2018 VS_II1404 605008e5480b65c90dad346385b0d555 329 SUPERFAMILY SSF52821 94 239 1.06E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_II1404 605008e5480b65c90dad346385b0d555 329 SMART SM00450 113 214 4.4E-24 T 14-10-2018 IPR001763 Rhodanese-like domain VS_II1404 605008e5480b65c90dad346385b0d555 329 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.75 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 VS_II1404 605008e5480b65c90dad346385b0d555 329 Gene3D G3DSA:3.40.250.10 97 252 9.9E-53 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_II1404 605008e5480b65c90dad346385b0d555 329 Pfam PF00581 Rhodanese-like domain 117 210 3.6E-9 T 14-10-2018 IPR001763 Rhodanese-like domain VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Gene3D G3DSA:1.10.150.310 499 630 5.0E-49 T 14-10-2018 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 SUPERFAMILY SSF50249 637 723 7.09E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Pfam PF09371 Tex-like protein N-terminal domain 9 192 1.5E-70 T 14-10-2018 IPR018974 Tex-like protein, N-terminal VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 SUPERFAMILY SSF158832 3 321 9.15E-118 T 14-10-2018 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 SUPERFAMILY SSF47781 560 632 7.56E-19 T 14-10-2018 IPR010994 RuvA domain 2-like VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Gene3D G3DSA:1.10.10.650 2 109 2.7E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 SUPERFAMILY SSF53098 322 469 7.05E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 SMART SM00732 326 424 4.0E-34 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Gene3D G3DSA:1.10.3500.10 112 498 1.3E-153 T 14-10-2018 IPR023323 Tex-like domain superfamily VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Pfam PF12836 Helix-hairpin-helix motif 491 555 7.0E-27 T 14-10-2018 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Gene3D G3DSA:2.40.50.140 631 726 2.6E-29 T 14-10-2018 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Pfam PF00575 S1 RNA binding domain 649 720 2.2E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Pfam PF16921 Tex protein YqgF-like domain 327 451 1.2E-54 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 SMART SM00316 649 720 1.9E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 Gene3D G3DSA:3.30.420.140 325 451 1.3E-153 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VS_0153 a7ea27d1ed06f878ad7ba9139d09013a 776 SUPERFAMILY SSF47781 470 557 4.0E-26 T 14-10-2018 IPR010994 RuvA domain 2-like VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 Gene3D G3DSA:3.40.50.300 8 332 2.8E-82 T 14-10-2018 VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 1.6E-120 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 1.0E-36 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 Gene3D G3DSA:1.20.1050.90 121 298 2.8E-82 T 14-10-2018 VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.218 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VS_0012 bacf53c13eb0d67fffcc066bbb2dae47 359 SUPERFAMILY SSF52540 1 355 3.17E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0875 1ef44f29f6af5df63381dc49dba93178 415 Pfam PF01547 Bacterial extracellular solute-binding protein 42 290 8.8E-19 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_0875 1ef44f29f6af5df63381dc49dba93178 415 Gene3D G3DSA:3.40.190.10 24 371 6.6E-161 T 14-10-2018 VS_0875 1ef44f29f6af5df63381dc49dba93178 415 SUPERFAMILY SSF53850 20 414 4.56E-62 T 14-10-2018 VS_0875 1ef44f29f6af5df63381dc49dba93178 415 Gene3D G3DSA:3.40.190.10 139 396 6.6E-161 T 14-10-2018 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 Pfam PF00158 Sigma-54 interaction domain 194 360 7.3E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 SMART SM00065 21 169 0.0026 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 Gene3D G3DSA:3.40.50.300 177 365 1.2E-61 T 14-10-2018 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 Pfam PF01590 GAF domain 25 156 2.2E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 SUPERFAMILY SSF52540 193 429 5.33E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 Gene3D G3DSA:3.30.450.40 3 175 8.8E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 SUPERFAMILY SSF46689 470 518 1.97E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 SUPERFAMILY SSF55781 7 182 8.72E-16 T 14-10-2018 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 Gene3D G3DSA:1.10.10.60 467 522 3.3E-7 T 14-10-2018 VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 SMART SM00382 214 357 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0563 3844665f07ac07f320bb8d778ef00edb 530 Gene3D G3DSA:1.10.8.60 366 446 1.3E-16 T 14-10-2018 VS_0838 21185171c6ef59738112af18f05484d1 503 Gene3D G3DSA:3.40.50.300 285 471 4.7E-58 T 14-10-2018 VS_0838 21185171c6ef59738112af18f05484d1 503 Gene3D G3DSA:1.20.120.1380 264 474 4.7E-58 T 14-10-2018 VS_0838 21185171c6ef59738112af18f05484d1 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 480 6.5E-39 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_0838 21185171c6ef59738112af18f05484d1 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 378 6.5E-86 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VS_0838 21185171c6ef59738112af18f05484d1 503 SMART SM00962 290 483 3.1E-64 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VS_0838 21185171c6ef59738112af18f05484d1 503 SMART SM00382 289 427 2.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0838 21185171c6ef59738112af18f05484d1 503 SUPERFAMILY SSF52540 286 478 7.88E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0860 b9df0f70fa0ce42a8c7a680bfef01ca6 430 Gene3D G3DSA:2.40.160.60 30 430 1.3E-121 T 14-10-2018 VS_0860 b9df0f70fa0ce42a8c7a680bfef01ca6 430 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 23 430 5.1E-126 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VS_0860 b9df0f70fa0ce42a8c7a680bfef01ca6 430 SUPERFAMILY SSF56935 30 430 3.36E-102 T 14-10-2018 VS_1335 fabe676f4c97979453c326445c3476ed 99 Gene3D G3DSA:2.60.200.60 57 98 1.4E-11 T 14-10-2018 VS_1335 fabe676f4c97979453c326445c3476ed 99 Pfam PF05488 PAAR motif 24 89 2.9E-25 T 14-10-2018 IPR008727 PAAR motif VS_1335 fabe676f4c97979453c326445c3476ed 99 Gene3D G3DSA:2.60.200.60 2 56 2.0E-9 T 14-10-2018 VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 SUPERFAMILY SSF55073 361 510 1.18E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 510 4.7E-35 T 14-10-2018 IPR000160 GGDEF domain VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 SMART SM00267 345 511 9.4E-44 T 14-10-2018 IPR000160 GGDEF domain VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 Pfam PF03924 CHASE domain 83 271 3.1E-26 T 14-10-2018 IPR006189 CHASE domain VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 356 507 7.3E-36 T 14-10-2018 IPR000160 GGDEF domain VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 Gene3D G3DSA:3.30.450.350 83 288 2.4E-8 T 14-10-2018 VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 Gene3D G3DSA:3.30.70.270 349 511 5.2E-45 T 14-10-2018 VS_1785 aedeb28e9bfe9a434acd6bee348f0057 512 SMART SM01079 78 273 6.9E-24 T 14-10-2018 IPR006189 CHASE domain VS_0180 3b5e5f46a84f4b32ccdfcfe52ef5ab09 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.045 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VS_0180 3b5e5f46a84f4b32ccdfcfe52ef5ab09 196 Gene3D G3DSA:1.10.357.10 3 196 3.9E-77 T 14-10-2018 VS_0180 3b5e5f46a84f4b32ccdfcfe52ef5ab09 196 SUPERFAMILY SSF48498 81 191 2.82E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_0180 3b5e5f46a84f4b32ccdfcfe52ef5ab09 196 SUPERFAMILY SSF46689 4 78 5.34E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0180 3b5e5f46a84f4b32ccdfcfe52ef5ab09 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Pfam PF08264 Anticodon-binding domain of tRNA 679 832 1.3E-39 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 955 15.987 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Gene3D G3DSA:1.10.287.380 883 955 4.2E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Gene3D G3DSA:3.40.50.620 358 577 1.1E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Gene3D G3DSA:3.40.50.620 2 197 9.4E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2732 7fd820e631eb758aab472f36ac7602fa 957 SUPERFAMILY SSF50677 191 365 8.5E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Gene3D G3DSA:3.90.740.10 198 357 2.5E-47 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 SUPERFAMILY SSF46589 890 954 4.34E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 SUPERFAMILY SSF52374 1 641 1.4E-134 T 14-10-2018 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.2E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.2E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.2E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.2E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.2E-33 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Gene3D G3DSA:1.10.730.10 578 823 5.6E-69 T 14-10-2018 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 SUPERFAMILY SSF47323 642 904 1.03E-64 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.8E-223 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 938 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VS_2732 7fd820e631eb758aab472f36ac7602fa 957 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 890 950 3.5E-18 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VS_2600 7e400e5b222ab12462b9a40e27fc1267 309 Gene3D G3DSA:3.10.350.10 50 95 3.8E-12 T 14-10-2018 IPR036779 LysM domain superfamily VS_2600 7e400e5b222ab12462b9a40e27fc1267 309 Gene3D G3DSA:2.70.70.10 129 309 1.1E-37 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_2600 7e400e5b222ab12462b9a40e27fc1267 309 Pfam PF01476 LysM domain 53 95 2.4E-11 T 14-10-2018 IPR018392 LysM domain VS_2600 7e400e5b222ab12462b9a40e27fc1267 309 SUPERFAMILY SSF51261 52 308 4.87E-54 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_2600 7e400e5b222ab12462b9a40e27fc1267 309 Pfam PF01551 Peptidase family M23 210 304 3.1E-31 T 14-10-2018 IPR016047 Peptidase M23 VS_2600 7e400e5b222ab12462b9a40e27fc1267 309 SMART SM00257 52 96 8.2E-11 T 14-10-2018 IPR018392 LysM domain VS_2359 df2510952df7616b4dc70db7daf8feb5 346 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 2.9E-135 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 Gene3D G3DSA:3.40.50.1100 53 383 6.0E-183 T 14-10-2018 VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 374 7.5E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.716 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 1.4E-194 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 Gene3D G3DSA:3.40.50.1100 9 204 6.0E-183 T 14-10-2018 VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 SUPERFAMILY SSF53686 5 388 7.33E-141 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_1970 02f6ab3c28c717abb74e409f71feaea0 396 PIRSF PIRSF001413 1 395 2.1E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_2762 41cd80f439280284cc8a97b5e928fc86 451 SUPERFAMILY SSF54631 139 278 1.26E-28 T 14-10-2018 VS_2762 41cd80f439280284cc8a97b5e928fc86 451 Gene3D G3DSA:3.10.580.10 135 262 3.1E-37 T 14-10-2018 VS_2762 41cd80f439280284cc8a97b5e928fc86 451 SMART SM00116 212 258 0.15 T 14-10-2018 IPR000644 CBS domain VS_2762 41cd80f439280284cc8a97b5e928fc86 451 SMART SM00116 146 199 8.0 T 14-10-2018 IPR000644 CBS domain VS_2762 41cd80f439280284cc8a97b5e928fc86 451 SMART SM00924 36 139 2.6E-35 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VS_2762 41cd80f439280284cc8a97b5e928fc86 451 Pfam PF00571 CBS domain 204 257 1.2E-5 T 14-10-2018 IPR000644 CBS domain VS_2762 41cd80f439280284cc8a97b5e928fc86 451 Pfam PF00571 CBS domain 139 195 5.1E-6 T 14-10-2018 IPR000644 CBS domain VS_2762 41cd80f439280284cc8a97b5e928fc86 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 7.9E-87 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VS_2762 41cd80f439280284cc8a97b5e928fc86 451 Pfam PF01769 Divalent cation transporter 323 444 9.6E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VS_2762 41cd80f439280284cc8a97b5e928fc86 451 Gene3D G3DSA:1.10.357.20 277 451 9.5E-45 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VS_2762 41cd80f439280284cc8a97b5e928fc86 451 Gene3D G3DSA:1.25.60.10 8 134 2.5E-19 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily VS_2762 41cd80f439280284cc8a97b5e928fc86 451 Pfam PF03448 MgtE intracellular N domain 36 137 1.5E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VS_2762 41cd80f439280284cc8a97b5e928fc86 451 SUPERFAMILY SSF161093 280 450 3.27E-43 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VS_2762 41cd80f439280284cc8a97b5e928fc86 451 SUPERFAMILY SSF158791 11 136 5.1E-30 T 14-10-2018 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 PIRSF PIRSF000463 9 726 2.3E-278 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 Gene3D G3DSA:3.20.20.80 234 612 7.5E-161 T 14-10-2018 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 133 207 4.4E-19 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 3.3E-16 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 SMART SM00642 250 595 2.0E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 115 723 1.6E-245 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 Pfam PF00128 Alpha amylase, catalytic domain 275 349 1.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 SUPERFAMILY SSF81296 21 102 6.8E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 Gene3D G3DSA:2.60.40.10 5 220 6.1E-49 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 SUPERFAMILY SSF51445 179 616 1.29E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 SUPERFAMILY SSF81296 138 193 2.66E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 91 726 41.014 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 Gene3D G3DSA:2.60.40.1180 623 726 2.2E-29 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VS_II0186 455b490ae0aeee11109bc27b2c3b1c05 726 SUPERFAMILY SSF51011 623 725 3.24E-26 T 14-10-2018 VS_II0034 33202599e9279112610a5a55f3258588 287 Gene3D G3DSA:1.10.10.10 3 82 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0034 33202599e9279112610a5a55f3258588 287 SUPERFAMILY SSF46689 5 79 1.61E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0034 33202599e9279112610a5a55f3258588 287 SUPERFAMILY SSF53697 97 268 2.04E-33 T 14-10-2018 VS_II0034 33202599e9279112610a5a55f3258588 287 Gene3D G3DSA:3.40.50.10490 94 273 3.7E-35 T 14-10-2018 VS_II0034 33202599e9279112610a5a55f3258588 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 78 7.6E-15 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VS_II0034 33202599e9279112610a5a55f3258588 287 Pfam PF01380 SIS domain 124 250 2.3E-14 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_1625 2ae48512e7c2ed27a5f39d052355d3f0 1240 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1129 1193 2.0E-14 T 14-10-2018 VS_1625 2ae48512e7c2ed27a5f39d052355d3f0 1240 Gene3D G3DSA:3.40.50.300 900 1233 7.3E-23 T 14-10-2018 VS_1625 2ae48512e7c2ed27a5f39d052355d3f0 1240 Gene3D G3DSA:3.40.50.300 1 284 4.8E-47 T 14-10-2018 VS_1625 2ae48512e7c2ed27a5f39d052355d3f0 1240 SUPERFAMILY SSF52540 1 1226 3.53E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1625 2ae48512e7c2ed27a5f39d052355d3f0 1240 Pfam PF13476 AAA domain 5 241 7.4E-27 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 PIRSF PIRSF001369 38 429 2.7E-173 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 Gene3D G3DSA:1.10.580.10 57 411 6.3E-150 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 Gene3D G3DSA:2.20.28.60 1 50 5.0E-24 T 14-10-2018 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 SUPERFAMILY SSF48256 4 428 1.2E-167 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 Gene3D G3DSA:1.10.230.10 268 376 6.3E-150 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 6.6E-135 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 PRINTS PR00143 Citrate synthase signature 241 269 2.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 PRINTS PR00143 Citrate synthase signature 296 316 2.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 PRINTS PR00143 Citrate synthase signature 219 234 2.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 PRINTS PR00143 Citrate synthase signature 165 178 2.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 PRINTS PR00143 Citrate synthase signature 359 375 2.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 PRINTS PR00143 Citrate synthase signature 379 393 2.6E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VS_2249 6e6149773d01e0a2bb00afefcbc798be 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.8E-237 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 VS_II0505 336ce18d01d3b7cc9f142c62121a63f3 396 SUPERFAMILY SSF56935 23 395 9.77E-64 T 14-10-2018 VS_II0505 336ce18d01d3b7cc9f142c62121a63f3 396 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 176 395 4.1E-35 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VS_II0505 336ce18d01d3b7cc9f142c62121a63f3 396 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 173 3.8E-23 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VS_II0505 336ce18d01d3b7cc9f142c62121a63f3 396 Gene3D G3DSA:2.40.160.60 23 396 1.8E-79 T 14-10-2018 VS_0199 f7edb62d48a045963a34a854c109034b 317 PIRSF PIRSF026649 12 314 6.7E-87 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VS_0199 f7edb62d48a045963a34a854c109034b 317 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.974 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VS_0199 f7edb62d48a045963a34a854c109034b 317 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 306 2.3E-82 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VS_0199 f7edb62d48a045963a34a854c109034b 317 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 314 8.9E-116 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.126 T 14-10-2018 IPR026593 Protein translocase subunit SecY VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 SUPERFAMILY SSF103491 15 425 3.53E-130 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 Pfam PF00344 SecY translocase 76 418 3.4E-117 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PIRSF PIRSF004557 10 442 2.1E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 2.0E-134 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 14-10-2018 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VS_2811 bf3be2a301bbda51c9593780b1e0f103 444 Gene3D G3DSA:1.10.3370.10 10 430 1.5E-159 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VS_2511 331f0411c9b239a361caf4668114bcb0 573 Pfam PF00759 Glycosyl hydrolase family 9 100 500 8.6E-25 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VS_2511 331f0411c9b239a361caf4668114bcb0 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 3.0E-10 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VS_2511 331f0411c9b239a361caf4668114bcb0 573 SUPERFAMILY SSF81296 2 90 1.82E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_2511 331f0411c9b239a361caf4668114bcb0 573 Gene3D G3DSA:1.50.10.10 94 573 1.7E-222 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VS_2511 331f0411c9b239a361caf4668114bcb0 573 Gene3D G3DSA:2.60.40.10 1 92 4.0E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_2511 331f0411c9b239a361caf4668114bcb0 573 SUPERFAMILY SSF48208 77 566 8.17E-95 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VS_1756 7d4548216c572666fbb6889d3f8fa874 165 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 2.5E-25 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VS_1756 7d4548216c572666fbb6889d3f8fa874 165 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 3.9E-49 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VS_1756 7d4548216c572666fbb6889d3f8fa874 165 Gene3D G3DSA:2.30.110.20 2 160 3.4E-50 T 14-10-2018 IPR036624 Hcp1-like superfamily VS_1756 7d4548216c572666fbb6889d3f8fa874 165 SUPERFAMILY SSF141452 4 154 3.27E-31 T 14-10-2018 IPR036624 Hcp1-like superfamily VS_2118 4305f3109395e1b037853eb5a86c5da7 241 SUPERFAMILY SSF52833 69 233 1.94E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2118 4305f3109395e1b037853eb5a86c5da7 241 Pfam PF13462 Thioredoxin 75 233 1.7E-12 T 14-10-2018 IPR012336 Thioredoxin-like fold VS_2118 4305f3109395e1b037853eb5a86c5da7 241 Gene3D G3DSA:3.40.30.10 67 240 1.2E-28 T 14-10-2018 VS_1428 9bfbf1db92670f1e422c05ad85a2c5f8 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 28.76 T 14-10-2018 IPR007040 Ribosome modulation factor VS_1428 9bfbf1db92670f1e422c05ad85a2c5f8 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-20 T 14-10-2018 IPR007040 Ribosome modulation factor VS_1428 9bfbf1db92670f1e422c05ad85a2c5f8 57 Pfam PF04957 Ribosome modulation factor 1 54 1.4E-27 T 14-10-2018 IPR007040 Ribosome modulation factor VS_1428 9bfbf1db92670f1e422c05ad85a2c5f8 57 Gene3D G3DSA:1.10.10.620 1 57 1.9E-28 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily VS_0007 d0eecdc5e3c36277ae6218be53fc4ecc 245 SMART SM00382 26 216 8.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0007 d0eecdc5e3c36277ae6218be53fc4ecc 245 Pfam PF00005 ABC transporter 17 168 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0007 d0eecdc5e3c36277ae6218be53fc4ecc 245 SUPERFAMILY SSF52540 1 238 3.19E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0007 d0eecdc5e3c36277ae6218be53fc4ecc 245 PIRSF PIRSF039085 1 244 2.7E-107 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VS_0007 d0eecdc5e3c36277ae6218be53fc4ecc 245 Gene3D G3DSA:3.40.50.300 1 243 2.6E-76 T 14-10-2018 VS_0007 d0eecdc5e3c36277ae6218be53fc4ecc 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0373 fe8b6576d2cc13a972247b7cee436512 799 Pfam PF04453 Organic solvent tolerance protein 308 700 7.5E-111 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VS_0373 fe8b6576d2cc13a972247b7cee436512 799 Pfam PF03968 OstA-like protein 68 200 1.0E-17 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VS_0373 fe8b6576d2cc13a972247b7cee436512 799 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 771 19.338 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VS_0373 fe8b6576d2cc13a972247b7cee436512 799 Gene3D G3DSA:2.60.450.10 59 204 7.3E-6 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.7E-149 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PIRSF PIRSF000350 1 468 1.8E-83 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 Gene3D G3DSA:3.50.50.60 150 271 2.0E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 Gene3D G3DSA:3.50.50.60 9 332 2.0E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 8.4E-68 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 3.5E-62 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 Gene3D G3DSA:3.30.390.30 346 467 8.2E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.6E-40 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.6E-40 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.6E-40 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.6E-40 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.6E-40 T 14-10-2018 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 6.4E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 SUPERFAMILY SSF55424 343 466 3.95E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_2540 ddb9b9bb13a5e38e708de7c0d6fe366f 476 SUPERFAMILY SSF51905 6 369 5.18E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_1239 4b0eeec85181f22cfbfa04d4d179a254 308 Pfam PF00491 Arginase family 33 297 2.1E-88 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VS_1239 4b0eeec85181f22cfbfa04d4d179a254 308 SUPERFAMILY SSF52768 12 303 1.55E-95 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VS_1239 4b0eeec85181f22cfbfa04d4d179a254 308 TIGRFAM TIGR01230 agmatinase: agmatinase 23 299 3.1E-93 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 VS_1239 4b0eeec85181f22cfbfa04d4d179a254 308 Gene3D G3DSA:3.40.800.10 2 308 3.7E-105 T 14-10-2018 VS_1239 4b0eeec85181f22cfbfa04d4d179a254 308 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VS_1239 4b0eeec85181f22cfbfa04d4d179a254 308 PIRSF PIRSF036979 11 305 7.6E-96 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.415 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 SUPERFAMILY SSF53901 1 258 4.14E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 PIRSF PIRSF000429 1 387 5.4E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 4.2E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 SUPERFAMILY SSF53901 262 386 4.75E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.9E-237 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 Gene3D G3DSA:3.40.47.10 134 381 3.4E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 Gene3D G3DSA:3.40.47.10 4 267 3.4E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.0E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 5.9E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 VS_0040 d7f25b825ba82034a0bb5f07238c11a5 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VS_II0948 f459e3f0d301cc8ecc0cd559ad750281 322 SUPERFAMILY SSF117892 91 225 1.15E-12 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VS_II0948 f459e3f0d301cc8ecc0cd559ad750281 322 Pfam PF01145 SPFH domain / Band 7 family 64 243 1.3E-24 T 14-10-2018 IPR001107 Band 7 domain VS_II0948 f459e3f0d301cc8ecc0cd559ad750281 322 SMART SM00244 60 222 2.6E-14 T 14-10-2018 IPR001107 Band 7 domain VS_II0948 f459e3f0d301cc8ecc0cd559ad750281 322 Gene3D G3DSA:3.30.479.30 88 223 1.2E-6 T 14-10-2018 VS_II1038 5396205cafd7bfdf46c24d2bad4788ba 392 Gene3D G3DSA:2.40.420.20 51 333 4.0E-37 T 14-10-2018 VS_II1038 5396205cafd7bfdf46c24d2bad4788ba 392 Gene3D G3DSA:1.10.287.470 103 173 4.0E-37 T 14-10-2018 VS_II1038 5396205cafd7bfdf46c24d2bad4788ba 392 Gene3D G3DSA:2.40.50.100 66 213 4.0E-37 T 14-10-2018 VS_II1038 5396205cafd7bfdf46c24d2bad4788ba 392 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 333 1.5E-37 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II1038 5396205cafd7bfdf46c24d2bad4788ba 392 SUPERFAMILY SSF111369 60 289 3.14E-12 T 14-10-2018 VS_II1038 5396205cafd7bfdf46c24d2bad4788ba 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 88 272 8.5E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II1038 5396205cafd7bfdf46c24d2bad4788ba 392 Gene3D G3DSA:2.40.30.170 53 293 4.0E-37 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:1.20.1640.10 29 527 4.8E-258 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:3.30.2090.10 198 290 4.8E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 SUPERFAMILY SSF82693 59 154 4.19E-23 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 SUPERFAMILY SSF82866 811 1033 8.63E-47 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 SUPERFAMILY SSF82866 311 510 1.83E-33 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Pfam PF00873 AcrB/AcrD/AcrF family 23 1031 1.5E-168 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 SUPERFAMILY SSF82714 731 806 2.49E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:3.30.70.1320 155 347 4.8E-258 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:3.30.70.1430 59 823 4.8E-258 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 SUPERFAMILY SSF82693 155 344 7.85E-19 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:1.20.1640.10 528 1027 4.8E-258 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 29 53 5.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 57 75 5.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 405 429 5.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 483 506 5.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 351 374 5.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 5.3E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:3.30.70.1440 674 875 4.8E-258 T 14-10-2018 VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:3.30.2090.10 725 815 4.8E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 SUPERFAMILY SSF82714 203 286 5.89E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_1986 4d91da7ab743e711d7ea3b0bf5deb58b 1036 Gene3D G3DSA:3.30.70.1430 575 673 4.8E-258 T 14-10-2018 VS_II0414 dfb559a5375755d0a3f3dc3eb562e782 456 Pfam PF03315 Serine dehydratase beta chain 3 153 9.1E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VS_II0414 dfb559a5375755d0a3f3dc3eb562e782 456 SUPERFAMILY SSF143548 16 155 1.41E-43 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VS_II0414 dfb559a5375755d0a3f3dc3eb562e782 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 1.1E-93 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VS_II0414 dfb559a5375755d0a3f3dc3eb562e782 456 Gene3D G3DSA:3.30.1330.90 10 157 5.6E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VS_II0414 dfb559a5375755d0a3f3dc3eb562e782 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 4.4E-198 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VS_2451 a1bafbfbee877dbd48fd3622b5190b98 68 Pfam PF06568 Domain of unknown function (DUF1127) 24 58 3.1E-10 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 VS_3052 ee1b792fd5763180697bb256f281e007 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 7.6E-79 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 PIRSF PIRSF001438 1 312 1.8E-121 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 Gene3D G3DSA:3.40.190.10 7 211 2.9E-84 T 14-10-2018 VS_3052 ee1b792fd5763180697bb256f281e007 312 SUPERFAMILY SSF54782 221 310 4.97E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 Gene3D G3DSA:3.40.190.10 104 203 2.9E-84 T 14-10-2018 VS_3052 ee1b792fd5763180697bb256f281e007 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 39.835 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 Gene3D G3DSA:3.30.160.40 222 307 2.7E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.8E-19 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 8.6E-114 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 SUPERFAMILY SSF53850 6 220 1.74E-85 T 14-10-2018 VS_3052 ee1b792fd5763180697bb256f281e007 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.1E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.1E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.1E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.1E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3052 ee1b792fd5763180697bb256f281e007 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.1E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 SUPERFAMILY SSF54980 608 695 2.25E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Gene3D G3DSA:3.30.70.870 410 485 9.4E-31 T 14-10-2018 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Gene3D G3DSA:2.40.30.10 299 405 2.9E-45 T 14-10-2018 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Pfam PF14492 Elongation Factor G, domain II 409 482 6.7E-32 T 14-10-2018 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Gene3D G3DSA:3.40.50.300 1 298 3.2E-117 T 14-10-2018 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 SUPERFAMILY SSF54211 484 604 3.54E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Gene3D G3DSA:3.30.230.10 489 693 4.0E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 SMART SM00838 605 693 9.4E-57 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.0E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.8E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 SUPERFAMILY SSF54980 407 485 1.04E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 SUPERFAMILY SSF52540 6 288 2.05E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 SUPERFAMILY SSF50447 271 409 3.79E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Pfam PF00679 Elongation factor G C-terminus 605 691 4.3E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 SMART SM00889 485 603 1.3E-67 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Pfam PF03764 Elongation factor G, domain IV 484 603 4.5E-45 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.7E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 110.692 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.6E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.6E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.6E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.6E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.6E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VS_2835 0bc07dfd6762ec6526d65a101e0a4916 698 Gene3D G3DSA:3.30.70.240 609 680 4.0E-88 T 14-10-2018 VS_1235 7e16c469721915d0e5fc9845db9dba72 524 SUPERFAMILY SSF52540 17 221 2.42E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1235 7e16c469721915d0e5fc9845db9dba72 524 Gene3D G3DSA:3.40.50.300 3 268 3.8E-44 T 14-10-2018 VS_1235 7e16c469721915d0e5fc9845db9dba72 524 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1235 7e16c469721915d0e5fc9845db9dba72 524 SUPERFAMILY SSF52540 354 513 3.13E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1235 7e16c469721915d0e5fc9845db9dba72 524 Gene3D G3DSA:3.40.50.300 300 522 4.6E-40 T 14-10-2018 VS_1235 7e16c469721915d0e5fc9845db9dba72 524 Pfam PF00005 ABC transporter 355 481 1.2E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1235 7e16c469721915d0e5fc9845db9dba72 524 SMART SM00382 361 521 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1235 7e16c469721915d0e5fc9845db9dba72 524 SMART SM00382 28 215 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1235 7e16c469721915d0e5fc9845db9dba72 524 Pfam PF00005 ABC transporter 21 170 9.0E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2810 42edd3cd31962c29977032b44b734d48 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2810 42edd3cd31962c29977032b44b734d48 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.3E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2810 42edd3cd31962c29977032b44b734d48 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.092 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2810 42edd3cd31962c29977032b44b734d48 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.8E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2810 42edd3cd31962c29977032b44b734d48 118 SUPERFAMILY SSF46946 2 114 8.83E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VS_2810 42edd3cd31962c29977032b44b734d48 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2810 42edd3cd31962c29977032b44b734d48 118 PIRSF PIRSF002134 1 118 4.3E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2810 42edd3cd31962c29977032b44b734d48 118 Gene3D G3DSA:1.10.8.50 1 71 1.5E-27 T 14-10-2018 VS_II0571 2c58b3dd75a573c69642c3033713834f 113 Pfam PF04320 Protein with unknown function (DUF469) 11 111 2.0E-33 T 14-10-2018 IPR007416 Protein of unknown function DUF469 VS_II0390 446d6a7385dd3428d225514cf32e3d08 370 SUPERFAMILY SSF50182 180 247 3.92E-18 T 14-10-2018 IPR010920 LSM domain superfamily VS_II0390 446d6a7385dd3428d225514cf32e3d08 370 SUPERFAMILY SSF82861 98 179 2.35E-13 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VS_II0390 446d6a7385dd3428d225514cf32e3d08 370 Pfam PF00924 Mechanosensitive ion channel 138 342 8.4E-54 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VS_II0390 446d6a7385dd3428d225514cf32e3d08 370 Gene3D G3DSA:3.30.70.100 249 346 1.3E-12 T 14-10-2018 VS_II0390 446d6a7385dd3428d225514cf32e3d08 370 SUPERFAMILY SSF82689 252 351 1.1E-16 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VS_II0390 446d6a7385dd3428d225514cf32e3d08 370 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VS_II0390 446d6a7385dd3428d225514cf32e3d08 370 Gene3D G3DSA:2.30.30.60 196 246 3.7E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VS_1689 a81fc9a535b826fa3a6b0752faf14b1b 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.4E-99 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VS_1689 a81fc9a535b826fa3a6b0752faf14b1b 378 PIRSF PIRSF000267 2 377 1.1E-113 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VS_1689 a81fc9a535b826fa3a6b0752faf14b1b 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.1E-148 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VS_II0141 6600b626f70cf67b76e110175bc3711d 287 Pfam PF08282 haloacid dehalogenase-like hydrolase 20 272 8.6E-63 T 14-10-2018 VS_II0141 6600b626f70cf67b76e110175bc3711d 287 Gene3D G3DSA:3.40.50.1000 18 272 4.4E-62 T 14-10-2018 IPR023214 HAD superfamily VS_II0141 6600b626f70cf67b76e110175bc3711d 287 Gene3D G3DSA:3.30.1240.10 97 207 4.4E-62 T 14-10-2018 VS_II0141 6600b626f70cf67b76e110175bc3711d 287 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 19 251 3.1E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VS_II0141 6600b626f70cf67b76e110175bc3711d 287 SUPERFAMILY SSF56784 13 272 9.22E-63 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0141 6600b626f70cf67b76e110175bc3711d 287 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 19 272 1.8E-57 T 14-10-2018 IPR000150 Cof family GO:0016787 VS_II0141 6600b626f70cf67b76e110175bc3711d 287 ProSitePatterns PS01228 Hypothetical cof family signature 1. 19 30 - T 14-10-2018 VS_II0141 6600b626f70cf67b76e110175bc3711d 287 ProSitePatterns PS01229 Hypothetical cof family signature 2. 232 254 - T 14-10-2018 VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 Gene3D G3DSA:1.20.58.590 124 316 2.5E-80 T 14-10-2018 IPR036141 MukF, middle domain superfamily VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 SUPERFAMILY SSF46785 13 123 2.45E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 Pfam PF17192 MukF middle domain 126 286 1.3E-78 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 PIRSF PIRSF018282 1 445 2.8E-245 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.166 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 Pfam PF03882 MukF winged-helix domain 10 122 2.1E-53 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 Pfam PF17193 MukF C-terminal domain 288 445 5.4E-76 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 SUPERFAMILY SSF140570 124 286 5.23E-77 T 14-10-2018 IPR036141 MukF, middle domain superfamily VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 Gene3D G3DSA:1.10.225.40 358 445 9.9E-38 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily VS_1094 faf6eda8178cf1b6cde63375e5d2755d 445 Gene3D G3DSA:1.10.10.10 29 123 6.0E-45 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1251 f7ffc460029c02a7d502e1a67561e415 239 SMART SM00895 107 230 2.3E-18 T 14-10-2018 IPR011711 GntR, C-terminal VS_1251 f7ffc460029c02a7d502e1a67561e415 239 SMART SM00345 19 78 4.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1251 f7ffc460029c02a7d502e1a67561e415 239 Pfam PF07729 FCD domain 108 229 4.8E-21 T 14-10-2018 IPR011711 GntR, C-terminal VS_1251 f7ffc460029c02a7d502e1a67561e415 239 Gene3D G3DSA:1.10.10.10 8 83 3.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1251 f7ffc460029c02a7d502e1a67561e415 239 Gene3D G3DSA:1.20.120.530 99 236 9.2E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1251 f7ffc460029c02a7d502e1a67561e415 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 78 7.7E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1251 f7ffc460029c02a7d502e1a67561e415 239 SUPERFAMILY SSF48008 107 235 3.66E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1251 f7ffc460029c02a7d502e1a67561e415 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1251 f7ffc460029c02a7d502e1a67561e415 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1251 f7ffc460029c02a7d502e1a67561e415 239 SUPERFAMILY SSF46785 11 82 2.1E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2967 45fc419926e7318924eaeb8d87404a30 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 5.6E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VS_2967 45fc419926e7318924eaeb8d87404a30 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2967 45fc419926e7318924eaeb8d87404a30 234 Gene3D G3DSA:3.30.190.20 21 225 2.3E-80 T 14-10-2018 VS_2967 45fc419926e7318924eaeb8d87404a30 234 SUPERFAMILY SSF56808 6 225 1.96E-81 T 14-10-2018 IPR023674 Ribosomal protein L1-like VS_2967 45fc419926e7318924eaeb8d87404a30 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.012 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VS_2967 45fc419926e7318924eaeb8d87404a30 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 7.4E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VS_2967 45fc419926e7318924eaeb8d87404a30 234 PIRSF PIRSF002155 1 227 1.7E-77 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2967 45fc419926e7318924eaeb8d87404a30 234 Gene3D G3DSA:3.40.50.790 68 159 2.3E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VS_3041 888ae945cdf081a1a6329c95cd5b9bb8 198 SMART SM01144 3 193 1.2E-53 T 14-10-2018 IPR005636 DTW VS_3041 888ae945cdf081a1a6329c95cd5b9bb8 198 Pfam PF03942 DTW domain 5 176 5.7E-43 T 14-10-2018 IPR005636 DTW VS_II0099 334d9807ca4de4c00bb5f1410d514daa 187 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 93 105 0.034 T 14-10-2018 IPR001451 Hexapeptide repeat VS_II0099 334d9807ca4de4c00bb5f1410d514daa 187 SUPERFAMILY SSF51161 2 184 1.25E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_II0099 334d9807ca4de4c00bb5f1410d514daa 187 Gene3D G3DSA:2.160.10.10 1 185 6.1E-67 T 14-10-2018 VS_II0099 334d9807ca4de4c00bb5f1410d514daa 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 164 2.8E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VS_II0099 334d9807ca4de4c00bb5f1410d514daa 187 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_II0099 334d9807ca4de4c00bb5f1410d514daa 187 SMART SM01266 5 58 9.7E-14 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VS_II0099 334d9807ca4de4c00bb5f1410d514daa 187 Pfam PF12464 Maltose acetyltransferase 7 54 6.8E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.0E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.0E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.0E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 5.7E-37 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 SUPERFAMILY SSF50249 6 83 4.07E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 24.828 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 Pfam PF00366 Ribosomal protein S17 10 77 3.1E-33 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 Gene3D G3DSA:2.40.50.140 1 84 2.0E-37 T 14-10-2018 VS_2822 07e7f5d8bc32519d9f22bbeabca590ee 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 2.0E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2688 6cff26d5978837b26544755a44578031 199 Gene3D G3DSA:3.90.950.10 1 199 6.4E-82 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_2688 6cff26d5978837b26544755a44578031 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.1E-66 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VS_2688 6cff26d5978837b26544755a44578031 199 SUPERFAMILY SSF52972 1 196 6.28E-74 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_2688 6cff26d5978837b26544755a44578031 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.844 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VS_2688 6cff26d5978837b26544755a44578031 199 Pfam PF01725 Ham1 family 4 192 1.5E-57 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VS_1847 0d38e64e3fa154b25853a454832b3128 836 Pfam PF02687 FtsX-like permease family 290 387 1.4E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_1847 0d38e64e3fa154b25853a454832b3128 836 Pfam PF02687 FtsX-like permease family 734 827 1.9E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 SUPERFAMILY SSF88659 162 239 6.35E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_0840 6fa804a20ffc3088c9619686860df5b7 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 1.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 1.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 1.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 1.2E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 Pfam PF04539 Sigma-70 region 3 100 171 2.6E-11 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 SUPERFAMILY SSF88946 6 91 7.33E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 Gene3D G3DSA:1.20.140.160 90 239 7.6E-44 T 14-10-2018 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 Gene3D G3DSA:1.10.1740.10 4 88 1.6E-27 T 14-10-2018 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 Pfam PF04542 Sigma-70 region 2 19 91 2.9E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 SUPERFAMILY SSF88659 92 157 6.1E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_0840 6fa804a20ffc3088c9619686860df5b7 244 PIRSF PIRSF000770 3 243 1.3E-37 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 Pfam PF04545 Sigma-70, region 4 187 234 1.4E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 2.0E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 62.846 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VS_0840 6fa804a20ffc3088c9619686860df5b7 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 2.8E-83 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VS_II0641 b2c8c8af136d92c8997033da48dac6ae 481 SUPERFAMILY SSF53300 318 475 1.3E-26 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0641 b2c8c8af136d92c8997033da48dac6ae 481 Pfam PF05762 VWA domain containing CoxE-like protein 320 447 5.7E-9 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like VS_II0641 b2c8c8af136d92c8997033da48dac6ae 481 Gene3D G3DSA:3.40.50.410 322 465 1.1E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0641 b2c8c8af136d92c8997033da48dac6ae 481 SMART SM00327 320 479 0.0017 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_II1318 75df813cf70cc397674f32a5613cc9cd 257 Gene3D G3DSA:3.30.1340.10 14 89 1.1E-6 T 14-10-2018 IPR035895 HPr-like superfamily VS_II1318 75df813cf70cc397674f32a5613cc9cd 257 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 8.0E-22 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II1318 75df813cf70cc397674f32a5613cc9cd 257 Pfam PF00381 PTS HPr component phosphorylation site 19 84 2.0E-4 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_II1318 75df813cf70cc397674f32a5613cc9cd 257 Gene3D G3DSA:3.40.930.10 104 252 2.7E-19 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1318 75df813cf70cc397674f32a5613cc9cd 257 SUPERFAMILY SSF55594 16 89 2.62E-11 T 14-10-2018 IPR035895 HPr-like superfamily VS_II1318 75df813cf70cc397674f32a5613cc9cd 257 SUPERFAMILY SSF55804 121 249 8.24E-20 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1318 75df813cf70cc397674f32a5613cc9cd 257 PIRSF PIRSF029195 1 257 1.4E-136 T 14-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 Gene3D G3DSA:1.20.1250.20 226 439 3.2E-48 T 14-10-2018 VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 SUPERFAMILY SSF103473 8 433 2.09E-38 T 14-10-2018 IPR036259 MFS transporter superfamily VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 Pfam PF00854 POT family 85 197 1.1E-27 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 Pfam PF00854 POT family 228 404 6.5E-30 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 225 2.0E-59 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 230 437 6.1E-44 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VS_2266 f0f3f631c9264afa60d0596207cf78cd 461 Gene3D G3DSA:1.20.1250.20 1 225 2.2E-72 T 14-10-2018 VS_2749 31083993f2b0c3980687a8fd12d3f2a1 261 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 259 1.1E-96 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VS_2749 31083993f2b0c3980687a8fd12d3f2a1 261 Pfam PF02405 Permease MlaE 46 257 5.5E-75 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VS_1189 87b8804d09dbdc941115e1a3a464980a 230 Gene3D G3DSA:3.30.70.2330 137 221 2.1E-6 T 14-10-2018 VS_2838 8aed3adbc18c763a1061b312a6b49337 91 SUPERFAMILY SSF75169 1 91 4.94E-19 T 14-10-2018 IPR027396 DsrEFH-like VS_2838 8aed3adbc18c763a1061b312a6b49337 91 Gene3D G3DSA:3.40.1260.10 1 91 1.2E-20 T 14-10-2018 IPR027396 DsrEFH-like VS_2838 8aed3adbc18c763a1061b312a6b49337 91 Pfam PF04077 DsrH like protein 10 87 5.7E-20 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VS_2838 8aed3adbc18c763a1061b312a6b49337 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 91 1.3E-19 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VS_1699 1547d8adc9e1e380403e3f9f15bd107a 205 Gene3D G3DSA:3.40.50.1240 5 205 3.5E-50 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VS_1699 1547d8adc9e1e380403e3f9f15bd107a 205 SUPERFAMILY SSF53254 7 189 2.78E-36 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VS_1699 1547d8adc9e1e380403e3f9f15bd107a 205 PIRSF PIRSF000709 3 199 0.0078 T 14-10-2018 VS_1699 1547d8adc9e1e380403e3f9f15bd107a 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 193 2.4E-34 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VS_1699 1547d8adc9e1e380403e3f9f15bd107a 205 SMART SM00855 8 157 1.1E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VS_II1249 51f63431925e7abc9e541e442e9bd189 357 Gene3D G3DSA:2.40.50.100 81 273 3.8E-11 T 14-10-2018 VS_II1249 51f63431925e7abc9e541e442e9bd189 357 Pfam PF13437 HlyD family secretion protein 239 307 2.5E-6 T 14-10-2018 VS_II1249 51f63431925e7abc9e541e442e9bd189 357 Gene3D G3DSA:1.10.287.470 115 225 3.8E-11 T 14-10-2018 VS_II1249 51f63431925e7abc9e541e442e9bd189 357 Gene3D G3DSA:2.40.30.170 80 314 3.8E-11 T 14-10-2018 VS_II0111 02c244f24585a8f7f868dd138b8b14b4 346 Pfam PF06742 Protein of unknown function (DUF1214) 247 328 5.9E-11 T 14-10-2018 IPR010621 Domain of unknown function DUF1214 VS_II0111 02c244f24585a8f7f868dd138b8b14b4 346 SUPERFAMILY SSF160935 12 332 3.92E-52 T 14-10-2018 VS_II0111 02c244f24585a8f7f868dd138b8b14b4 346 Pfam PF06863 Protein of unknown function (DUF1254) 58 95 8.7E-5 T 14-10-2018 IPR010679 Domain of unknown function DUF1254 VS_II0111 02c244f24585a8f7f868dd138b8b14b4 346 Gene3D G3DSA:2.60.120.1600 233 346 4.4E-13 T 14-10-2018 VS_2152 fa185d7a5ed6c53a10a99cac13ff5638 382 Gene3D G3DSA:3.40.50.2000 183 364 2.4E-50 T 14-10-2018 VS_2152 fa185d7a5ed6c53a10a99cac13ff5638 382 Pfam PF00534 Glycosyl transferases group 1 195 357 1.4E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VS_2152 fa185d7a5ed6c53a10a99cac13ff5638 382 SUPERFAMILY SSF53756 16 379 4.71E-62 T 14-10-2018 VS_2152 fa185d7a5ed6c53a10a99cac13ff5638 382 Gene3D G3DSA:3.40.50.2000 28 373 2.4E-50 T 14-10-2018 VS_0439 d2fc00975e2d13aee5f1d2f5ccf84385 605 Gene3D G3DSA:3.40.50.2300 265 598 4.1E-62 T 14-10-2018 VS_0439 d2fc00975e2d13aee5f1d2f5ccf84385 605 Gene3D G3DSA:1.25.40.10 26 148 1.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0439 d2fc00975e2d13aee5f1d2f5ccf84385 605 SUPERFAMILY SSF53822 264 602 6.06E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_0439 d2fc00975e2d13aee5f1d2f5ccf84385 605 Gene3D G3DSA:1.25.40.650 151 260 1.3E-16 T 14-10-2018 VS_0439 d2fc00975e2d13aee5f1d2f5ccf84385 605 Gene3D G3DSA:3.40.50.2300 371 599 4.1E-62 T 14-10-2018 VS_0439 d2fc00975e2d13aee5f1d2f5ccf84385 605 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 605 28.874 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VS_0439 d2fc00975e2d13aee5f1d2f5ccf84385 605 Pfam PF04348 LppC putative lipoprotein 42 603 3.0E-170 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 417 49.037 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 Pfam PF00270 DEAD/DEAH box helicase 27 194 2.4E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 Gene3D G3DSA:3.40.50.300 1 211 3.1E-70 T 14-10-2018 VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 Pfam PF00271 Helicase conserved C-terminal domain 234 341 2.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 SUPERFAMILY SSF52540 76 359 2.53E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 SMART SM00487 22 224 1.3E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 SMART SM00490 260 341 2.5E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0506 05d7b9ad6ee4f2a3d45f5eb4f6326c93 421 Gene3D G3DSA:3.40.50.300 216 421 5.5E-50 T 14-10-2018 VS_1858 0b7f23e5dfd84d82247942930017c662 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 444 6.8E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1858 0b7f23e5dfd84d82247942930017c662 448 Gene3D G3DSA:1.10.287.130 187 289 9.0E-7 T 14-10-2018 VS_1858 0b7f23e5dfd84d82247942930017c662 448 SUPERFAMILY SSF47384 222 286 9.61E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1858 0b7f23e5dfd84d82247942930017c662 448 SUPERFAMILY SSF55874 309 443 2.36E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1858 0b7f23e5dfd84d82247942930017c662 448 SMART SM00387 340 447 8.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1858 0b7f23e5dfd84d82247942930017c662 448 Gene3D G3DSA:3.30.565.10 307 447 8.7E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1858 0b7f23e5dfd84d82247942930017c662 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 2.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1858 0b7f23e5dfd84d82247942930017c662 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 2.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0414 def803781cd34b4f5b4434bca1ce14f9 249 Pfam PF00520 Ion transport protein 16 213 3.7E-16 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VS_0414 def803781cd34b4f5b4434bca1ce14f9 249 PRINTS PR00169 Potassium channel signature 153 175 1.0E-8 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0414 def803781cd34b4f5b4434bca1ce14f9 249 PRINTS PR00169 Potassium channel signature 182 208 1.0E-8 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0414 def803781cd34b4f5b4434bca1ce14f9 249 PRINTS PR00169 Potassium channel signature 122 145 1.0E-8 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0414 def803781cd34b4f5b4434bca1ce14f9 249 SUPERFAMILY SSF81324 9 209 2.5E-46 T 14-10-2018 VS_0414 def803781cd34b4f5b4434bca1ce14f9 249 Gene3D G3DSA:1.10.287.70 9 210 1.9E-43 T 14-10-2018 VS_0976 4c0919a8eb2bc25229796d2a84eeb0ed 276 Gene3D G3DSA:3.40.50.11540 157 273 1.6E-12 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_0976 4c0919a8eb2bc25229796d2a84eeb0ed 276 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 25 272 5.8E-95 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VS_0976 4c0919a8eb2bc25229796d2a84eeb0ed 276 SUPERFAMILY SSF142019 107 272 1.57E-48 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_0976 4c0919a8eb2bc25229796d2a84eeb0ed 276 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 276 97.958 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VS_0976 4c0919a8eb2bc25229796d2a84eeb0ed 276 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 152 271 1.3E-38 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_0976 4c0919a8eb2bc25229796d2a84eeb0ed 276 Pfam PF13375 RnfC Barrel sandwich hybrid domain 26 127 5.1E-34 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VS_1865 5cb3403a029c6ae1172ae4c6812cda95 96 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 7 93 1.2E-36 T 14-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin VS_1865 5cb3403a029c6ae1172ae4c6812cda95 96 Gene3D G3DSA:3.30.2310.20 6 95 7.3E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VS_1865 5cb3403a029c6ae1172ae4c6812cda95 96 SUPERFAMILY SSF143011 7 89 5.3E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VS_0418 8fa1439987d1af84bdbce58175fbe670 441 SUPERFAMILY SSF56954 1 428 6.8E-88 T 14-10-2018 VS_0418 8fa1439987d1af84bdbce58175fbe670 441 Pfam PF02321 Outer membrane efflux protein 25 214 9.0E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_0418 8fa1439987d1af84bdbce58175fbe670 441 Pfam PF02321 Outer membrane efflux protein 240 422 4.6E-30 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_0418 8fa1439987d1af84bdbce58175fbe670 441 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 436 2.6E-107 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VS_0418 8fa1439987d1af84bdbce58175fbe670 441 Gene3D G3DSA:1.20.1600.10 23 440 5.7E-117 T 14-10-2018 VS_II1513 d0b283e701d99efbe24cb7b75a8f9e35 247 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 31 148 2.9E-18 T 14-10-2018 IPR032871 AHH domain-containing protein VS_2419 eda4738c1dbbe08ff9866c516c6a46ec 361 Gene3D G3DSA:3.40.50.1820 42 361 9.0E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2419 eda4738c1dbbe08ff9866c516c6a46ec 361 SUPERFAMILY SSF53474 71 330 1.31E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2419 eda4738c1dbbe08ff9866c516c6a46ec 361 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 29 361 4.3E-179 T 14-10-2018 IPR010520 UPF0255 family VS_0480 757faede9e97eec7dbd2bd36f1fd9b39 161 SUPERFAMILY SSF89562 1 156 1.44E-49 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VS_0480 757faede9e97eec7dbd2bd36f1fd9b39 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.0E-68 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VS_0480 757faede9e97eec7dbd2bd36f1fd9b39 161 Gene3D G3DSA:3.50.30.40 1 160 2.6E-65 T 14-10-2018 VS_0480 757faede9e97eec7dbd2bd36f1fd9b39 161 Pfam PF03737 Aldolase/RraA 5 152 5.4E-44 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VS_2670 37549e1b786d22b6accbf7db834153b4 356 Pfam PF00155 Aminotransferase class I and II 74 284 3.3E-20 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_2670 37549e1b786d22b6accbf7db834153b4 356 Gene3D G3DSA:3.90.1150.10 262 333 5.5E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2670 37549e1b786d22b6accbf7db834153b4 356 Gene3D G3DSA:3.40.640.10 66 261 5.5E-41 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2670 37549e1b786d22b6accbf7db834153b4 356 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 213 226 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VS_2670 37549e1b786d22b6accbf7db834153b4 356 SUPERFAMILY SSF53383 13 353 3.26E-40 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0130 59c0a93c53840e9f0f81dfcb1cf542b0 209 Gene3D G3DSA:3.40.50.1000 8 190 1.7E-43 T 14-10-2018 IPR023214 HAD superfamily VS_II0130 59c0a93c53840e9f0f81dfcb1cf542b0 209 Gene3D G3DSA:1.10.150.240 20 90 1.7E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_II0130 59c0a93c53840e9f0f81dfcb1cf542b0 209 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 10 162 1.4E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0130 59c0a93c53840e9f0f81dfcb1cf542b0 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 187 5.8E-29 T 14-10-2018 VS_II0130 59c0a93c53840e9f0f81dfcb1cf542b0 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 187 6.3E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0130 59c0a93c53840e9f0f81dfcb1cf542b0 209 SUPERFAMILY SSF56784 6 193 4.61E-43 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0130 59c0a93c53840e9f0f81dfcb1cf542b0 209 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 187 2.0E-48 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VS_II0442 989c4f6a41da7d7521a7e14800dc35bb 358 Gene3D G3DSA:3.90.1150.10 254 356 2.4E-7 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0442 989c4f6a41da7d7521a7e14800dc35bb 358 Gene3D G3DSA:3.40.640.10 2 253 1.4E-64 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0442 989c4f6a41da7d7521a7e14800dc35bb 358 Pfam PF01212 Beta-eliminating lyase 27 291 3.0E-32 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VS_II0442 989c4f6a41da7d7521a7e14800dc35bb 358 SUPERFAMILY SSF53383 22 316 1.07E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_0288 c990714899b726c8cdd522bfb474d69d 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.4E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.4E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.4E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.4E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.4E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.4E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 Pfam PF00342 Phosphoglucose isomerase 53 542 2.4E-251 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 SUPERFAMILY SSF53697 6 547 5.56E-222 T 14-10-2018 VS_0288 c990714899b726c8cdd522bfb474d69d 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.214 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0288 c990714899b726c8cdd522bfb474d69d 550 Gene3D G3DSA:3.40.50.10490 13 507 7.0E-239 T 14-10-2018 VS_0288 c990714899b726c8cdd522bfb474d69d 550 Gene3D G3DSA:3.40.50.10490 99 292 7.0E-239 T 14-10-2018 VS_0288 c990714899b726c8cdd522bfb474d69d 550 Gene3D G3DSA:1.10.1390.10 508 548 3.6E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0702 d03d051c200246a03811fb846e95ed82 358 Hamap MF_01113 DNA polymerase IV [dinB]. 9 357 36.574 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VS_0702 d03d051c200246a03811fb846e95ed82 358 Pfam PF00817 impB/mucB/samB family 15 162 2.4E-47 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VS_0702 d03d051c200246a03811fb846e95ed82 358 Pfam PF11798 IMS family HHH motif 174 204 5.3E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VS_0702 d03d051c200246a03811fb846e95ed82 358 Gene3D G3DSA:2.30.40.20 19 76 6.7E-27 T 14-10-2018 VS_0702 d03d051c200246a03811fb846e95ed82 358 Gene3D G3DSA:3.30.1490.100 245 357 1.2E-25 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VS_0702 d03d051c200246a03811fb846e95ed82 358 SUPERFAMILY SSF100879 249 357 6.87E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VS_0702 d03d051c200246a03811fb846e95ed82 358 Gene3D G3DSA:1.10.150.20 178 236 9.4E-15 T 14-10-2018 VS_0702 d03d051c200246a03811fb846e95ed82 358 Gene3D G3DSA:3.30.70.270 77 177 9.5E-36 T 14-10-2018 VS_0702 d03d051c200246a03811fb846e95ed82 358 SUPERFAMILY SSF56672 7 242 1.25E-92 T 14-10-2018 VS_0702 d03d051c200246a03811fb846e95ed82 358 Pfam PF11799 impB/mucB/samB family C-terminal domain 245 345 1.2E-6 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VS_0613 5083f374750aee0d71209b2d6b668082 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 5.0E-34 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VS_0613 5083f374750aee0d71209b2d6b668082 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 4.5E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VS_0613 5083f374750aee0d71209b2d6b668082 66 PIRSF PIRSF039003 3 66 7.8E-33 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VS_0613 5083f374750aee0d71209b2d6b668082 66 SUPERFAMILY SSF140319 2 64 6.54E-28 T 14-10-2018 IPR036762 IscX-like superfamily VS_0613 5083f374750aee0d71209b2d6b668082 66 Gene3D G3DSA:1.10.10.600 1 66 1.5E-28 T 14-10-2018 IPR036762 IscX-like superfamily VS_0553 d2b6c4ae74437f1cfd492a49336344bc 98 PIRSF PIRSF003196 1 98 4.8E-38 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VS_0553 d2b6c4ae74437f1cfd492a49336344bc 98 Gene3D G3DSA:1.10.1270.10 1 98 5.1E-35 T 14-10-2018 IPR038116 TrpR-like superfamily VS_0553 d2b6c4ae74437f1cfd492a49336344bc 98 Pfam PF01371 Trp repressor protein 8 93 4.9E-31 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VS_0553 d2b6c4ae74437f1cfd492a49336344bc 98 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 81 6.0E-31 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VS_0553 d2b6c4ae74437f1cfd492a49336344bc 98 Hamap MF_00475 Trp operon repressor [trpR]. 6 98 21.182 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VS_0553 d2b6c4ae74437f1cfd492a49336344bc 98 SUPERFAMILY SSF48295 2 96 6.8E-30 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VS_0553 d2b6c4ae74437f1cfd492a49336344bc 98 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 86 2.2E-27 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 SUPERFAMILY SSF52540 21 272 2.38E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 520 542 0.0094 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 252 277 1.5E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 SUPERFAMILY SSF52540 292 540 5.02E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 Pfam PF00005 ABC transporter 42 200 9.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 Pfam PF00005 ABC transporter 319 469 4.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 Gene3D G3DSA:3.40.50.300 19 286 1.5E-80 T 14-10-2018 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 Gene3D G3DSA:3.40.50.300 288 547 9.3E-78 T 14-10-2018 VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 SMART SM00382 50 250 8.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0932 415be49375efbdd228e9d6a19bbce69f 549 SMART SM00382 327 533 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1060 c21aa0228ed77125b7f84848c95b9449 721 Pfam PF00326 Prolyl oligopeptidase family 505 719 1.9E-68 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 SUPERFAMILY SSF53474 453 700 3.98E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1060 c21aa0228ed77125b7f84848c95b9449 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 1.8E-48 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 1.8E-48 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 1.8E-48 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 1.8E-48 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 1.8E-48 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 1.8E-48 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 Gene3D G3DSA:3.40.50.1820 60 713 1.1E-246 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1060 c21aa0228ed77125b7f84848c95b9449 721 SUPERFAMILY SSF50993 39 450 3.66E-94 T 14-10-2018 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 Gene3D G3DSA:2.130.10.120 111 445 1.1E-246 T 14-10-2018 VS_1060 c21aa0228ed77125b7f84848c95b9449 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 4.3E-98 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VS_II0358 c80199e368e5bacddab9bb867c116a87 116 Gene3D G3DSA:3.20.160.10 1 114 2.1E-48 T 14-10-2018 IPR038604 Type III effector HopJ superfamily VS_II0358 c80199e368e5bacddab9bb867c116a87 116 Pfam PF08888 HopJ type III effector protein 4 111 1.1E-48 T 14-10-2018 IPR014984 HopJ type III effector protein VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 Pfam PF00698 Acyl transferase domain 7 291 2.5E-36 T 14-10-2018 IPR014043 Acyl transferase VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 Gene3D G3DSA:3.30.70.250 125 197 1.3E-104 T 14-10-2018 VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 7.7E-41 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 SUPERFAMILY SSF55048 130 197 7.46E-18 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 PIRSF PIRSF000446 1 307 7.1E-135 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 Gene3D G3DSA:3.40.366.10 5 286 1.3E-104 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 SUPERFAMILY SSF52151 4 305 2.3E-80 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_1023 ff6db03d74dc5c745ecb4e8084f09df9 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.6E-125 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VS_II1266 9fd5204d252472c6f816c7eab20452c4 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 256 4.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II1266 9fd5204d252472c6f816c7eab20452c4 292 Gene3D G3DSA:1.10.3720.10 56 263 2.4E-18 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1266 9fd5204d252472c6f816c7eab20452c4 292 SUPERFAMILY SSF161098 63 252 1.44E-21 T 14-10-2018 IPR035906 MetI-like superfamily VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Gene3D G3DSA:3.40.630.40 156 398 2.9E-68 T 14-10-2018 VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SUPERFAMILY SSF54106 472 516 1.96E-9 T 14-10-2018 VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Gene3D G3DSA:3.10.350.10 462 522 2.4E-15 T 14-10-2018 IPR036779 LysM domain superfamily VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Gene3D G3DSA:3.10.350.10 524 571 5.0E-15 T 14-10-2018 IPR036779 LysM domain superfamily VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Gene3D G3DSA:3.10.350.10 402 461 1.7E-15 T 14-10-2018 IPR036779 LysM domain superfamily VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SMART SM00646 230 389 1.1E-61 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SUPERFAMILY SSF54106 526 569 4.05E-10 T 14-10-2018 VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 170 389 1.9E-49 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SUPERFAMILY SSF53187 168 392 1.0E-51 T 14-10-2018 VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SMART SM00257 414 457 9.0E-15 T 14-10-2018 IPR018392 LysM domain VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SMART SM00257 526 569 6.3E-12 T 14-10-2018 IPR018392 LysM domain VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SMART SM00257 473 516 7.0E-12 T 14-10-2018 IPR018392 LysM domain VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Pfam PF11741 AMIN domain 34 136 5.0E-18 T 14-10-2018 IPR021731 AMIN domain VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Pfam PF01476 LysM domain 474 515 1.2E-10 T 14-10-2018 IPR018392 LysM domain VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Pfam PF01476 LysM domain 527 569 8.5E-13 T 14-10-2018 IPR018392 LysM domain VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Pfam PF01476 LysM domain 415 457 2.7E-13 T 14-10-2018 IPR018392 LysM domain VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 SUPERFAMILY SSF54106 414 457 2.09E-10 T 14-10-2018 VS_0267 0f4486eb1621f803030d4fb209e7de8c 571 Gene3D G3DSA:2.60.40.3500 23 138 2.7E-25 T 14-10-2018 VS_II0818 e4820ad074448e3b42c62d59a21d8400 430 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 231 247 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_II0818 e4820ad074448e3b42c62d59a21d8400 430 PIRSF PIRSF000412 5 430 1.8E-168 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_II0818 e4820ad074448e3b42c62d59a21d8400 430 Pfam PF00464 Serine hydroxymethyltransferase 18 394 3.1E-174 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_II0818 e4820ad074448e3b42c62d59a21d8400 430 SUPERFAMILY SSF53383 7 429 2.36E-179 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0818 e4820ad074448e3b42c62d59a21d8400 430 Gene3D G3DSA:3.90.1150.10 20 401 1.8E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0818 e4820ad074448e3b42c62d59a21d8400 430 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 16 430 52.817 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_II0818 e4820ad074448e3b42c62d59a21d8400 430 Gene3D G3DSA:3.40.640.10 46 297 1.8E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1686 77a30d84d337cf8bdfdd3acb55b5a4dc 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 83 3.8E-9 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VS_2500 78aff31ab6366a296e480f8b4b553cf4 374 SUPERFAMILY SSF111369 68 283 1.24E-29 T 14-10-2018 VS_2500 78aff31ab6366a296e480f8b4b553cf4 374 Gene3D G3DSA:2.40.30.170 68 287 2.8E-47 T 14-10-2018 VS_2500 78aff31ab6366a296e480f8b4b553cf4 374 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 359 1.1E-44 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_2500 78aff31ab6366a296e480f8b4b553cf4 374 Gene3D G3DSA:1.10.287.470 114 173 2.8E-47 T 14-10-2018 VS_2500 78aff31ab6366a296e480f8b4b553cf4 374 Gene3D G3DSA:2.40.420.20 288 359 2.8E-47 T 14-10-2018 VS_2500 78aff31ab6366a296e480f8b4b553cf4 374 Gene3D G3DSA:2.40.50.100 79 207 2.8E-47 T 14-10-2018 VS_2500 78aff31ab6366a296e480f8b4b553cf4 374 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 77 276 2.5E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II0701 b13a31027b647dff2b5c002d261cad1a 383 SUPERFAMILY SSF103473 15 372 9.68E-34 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II0701 b13a31027b647dff2b5c002d261cad1a 383 Gene3D G3DSA:1.20.1250.20 7 377 2.3E-29 T 14-10-2018 VS_II0701 b13a31027b647dff2b5c002d261cad1a 383 Pfam PF07690 Major Facilitator Superfamily 15 340 1.8E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_2443 bffe43dafae7b9a8d8be9ae81ddea6a4 484 Pfam PF13629 Pilus formation protein N terminal region 26 95 1.4E-18 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VS_2443 bffe43dafae7b9a8d8be9ae81ddea6a4 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 385 403 1.1E-11 T 14-10-2018 IPR001775 GspD/PilQ family VS_2443 bffe43dafae7b9a8d8be9ae81ddea6a4 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.1E-11 T 14-10-2018 IPR001775 GspD/PilQ family VS_2443 bffe43dafae7b9a8d8be9ae81ddea6a4 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 251 275 1.1E-11 T 14-10-2018 IPR001775 GspD/PilQ family VS_2443 bffe43dafae7b9a8d8be9ae81ddea6a4 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 408 422 1.1E-11 T 14-10-2018 IPR001775 GspD/PilQ family VS_2443 bffe43dafae7b9a8d8be9ae81ddea6a4 484 Pfam PF04972 BON domain 100 145 2.1E-5 T 14-10-2018 IPR007055 BON domain VS_2443 bffe43dafae7b9a8d8be9ae81ddea6a4 484 Pfam PF00263 Bacterial type II and III secretion system protein 256 419 2.7E-39 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 Gene3D G3DSA:3.30.450.20 33 175 9.6E-34 T 14-10-2018 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 SUPERFAMILY SSF55874 415 546 7.86E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1302 afa61d948886f1186551d4e1b2e24d87 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 8.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 546 8.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 8.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 332 383 5.7E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VS_1302 afa61d948886f1186551d4e1b2e24d87 551 SUPERFAMILY SSF55785 228 318 3.24E-9 T 14-10-2018 IPR035965 PAS domain superfamily VS_1302 afa61d948886f1186551d4e1b2e24d87 551 Pfam PF17203 Single cache domain 3 36 179 1.1E-17 T 14-10-2018 IPR033463 Single cache domain 3 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 Gene3D G3DSA:3.30.450.20 210 322 2.8E-18 T 14-10-2018 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 SMART SM00387 430 549 1.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1302 afa61d948886f1186551d4e1b2e24d87 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 548 2.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1302 afa61d948886f1186551d4e1b2e24d87 551 Gene3D G3DSA:3.30.565.10 392 551 2.1E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1302 afa61d948886f1186551d4e1b2e24d87 551 SUPERFAMILY SSF55890 334 419 7.06E-10 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VS_1302 afa61d948886f1186551d4e1b2e24d87 551 SUPERFAMILY SSF103190 39 180 9.42E-30 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II1281 6ec06e46e2c0eb665140323f12b7f96f 51 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 1.8E-22 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VS_2299 ceff187e31731cb1edd81478f58dc4af 97 Pfam PF09904 Winged helix-turn helix 6 92 6.8E-38 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VS_2299 ceff187e31731cb1edd81478f58dc4af 97 Gene3D G3DSA:1.10.10.10 2 97 7.9E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2299 ceff187e31731cb1edd81478f58dc4af 97 PIRSF PIRSF037266 1 96 2.2E-41 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VS_II0266 2c8d80d798719672ab1cf9c73de9ec7b 727 Gene3D G3DSA:1.20.1220.12 588 727 5.6E-71 T 14-10-2018 VS_II0266 2c8d80d798719672ab1cf9c73de9ec7b 727 Hamap MF_00641 Malate synthase G [glcB]. 1 727 390.203 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0266 2c8d80d798719672ab1cf9c73de9ec7b 727 SUPERFAMILY SSF51645 3 725 1.57E-303 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0266 2c8d80d798719672ab1cf9c73de9ec7b 727 Gene3D G3DSA:3.20.20.360 10 585 2.1E-274 T 14-10-2018 VS_II0266 2c8d80d798719672ab1cf9c73de9ec7b 727 Gene3D G3DSA:2.170.170.11 135 268 2.1E-274 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0266 2c8d80d798719672ab1cf9c73de9ec7b 727 Pfam PF01274 Malate synthase 18 700 4.0E-169 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0266 2c8d80d798719672ab1cf9c73de9ec7b 727 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 725 0.0 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0813 9756b06453102f287e753107a8a1eec3 107 SUPERFAMILY SSF47413 3 66 1.77E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II0813 9756b06453102f287e753107a8a1eec3 107 Gene3D G3DSA:1.10.260.40 10 73 5.7E-11 T 14-10-2018 VS_II0813 9756b06453102f287e753107a8a1eec3 107 SMART SM00530 11 66 9.1E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II0813 9756b06453102f287e753107a8a1eec3 107 Pfam PF01381 Helix-turn-helix 13 62 1.8E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II0617 9f0915cce30e670daf73c887845d47e9 501 SUPERFAMILY SSF53720 13 492 2.88E-166 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_II0617 9f0915cce30e670daf73c887845d47e9 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VS_II0617 9f0915cce30e670daf73c887845d47e9 501 Pfam PF00171 Aldehyde dehydrogenase family 27 489 1.1E-170 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_II0617 9f0915cce30e670daf73c887845d47e9 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VS_II0617 9f0915cce30e670daf73c887845d47e9 501 Gene3D G3DSA:3.40.309.10 266 459 1.8E-169 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_II0617 9f0915cce30e670daf73c887845d47e9 501 Gene3D G3DSA:3.40.605.10 23 487 1.8E-169 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Pfam PF13361 UvrD-like helicase C-terminal domain 745 816 1.1E-11 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 SUPERFAMILY SSF57783 919 948 4.42E-6 T 14-10-2018 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 SUPERFAMILY SSF52540 189 829 2.66E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Gene3D G3DSA:3.40.50.300 183 329 1.6E-23 T 14-10-2018 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Gene3D G3DSA:3.40.91.30 355 418 3.7E-6 T 14-10-2018 IPR011578 T7 endonuclease I-like GO:0003677|GO:0004536 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 854 887 5.8E-7 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 920 943 1.3E-4 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Pfam PF00580 UvrD/REP helicase N-terminal domain 190 629 6.5E-34 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Gene3D G3DSA:3.40.50.300 644 842 3.0E-20 T 14-10-2018 VS_1650 19f3d4b296719e1b1a451271c769cc7c 961 Gene3D G3DSA:3.40.50.300 451 637 7.6E-25 T 14-10-2018 VS_0116 8b29bd480d2864468b14242908d2f580 463 Gene3D G3DSA:1.10.10.920 370 463 9.8E-35 T 14-10-2018 VS_0116 8b29bd480d2864468b14242908d2f580 463 Pfam PF06969 HemN C-terminal domain 369 437 4.8E-10 T 14-10-2018 IPR010723 HemN, C-terminal VS_0116 8b29bd480d2864468b14242908d2f580 463 SMART SM00729 58 278 3.0E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_0116 8b29bd480d2864468b14242908d2f580 463 SUPERFAMILY SSF102114 12 450 4.58E-145 T 14-10-2018 VS_0116 8b29bd480d2864468b14242908d2f580 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 6.0E-208 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VS_0116 8b29bd480d2864468b14242908d2f580 463 PIRSF PIRSF000167 9 460 5.9E-171 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VS_0116 8b29bd480d2864468b14242908d2f580 463 Pfam PF04055 Radical SAM superfamily 63 233 3.2E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_0116 8b29bd480d2864468b14242908d2f580 463 Gene3D G3DSA:3.80.30.20 7 369 1.8E-136 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 Gene3D G3DSA:3.40.190.10 93 295 2.2E-62 T 14-10-2018 VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 Pfam PF03466 LysR substrate binding domain 100 299 7.4E-23 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 SUPERFAMILY SSF46785 7 87 6.8E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 SUPERFAMILY SSF53850 92 298 2.33E-39 T 14-10-2018 VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 Gene3D G3DSA:1.10.10.10 3 90 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0038 f043c95d1f9a49a8f768f7b0a895a629 313 Gene3D G3DSA:3.40.190.10 172 271 2.2E-62 T 14-10-2018 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Pfam PF00512 His Kinase A (phospho-acceptor) domain 402 467 1.4E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SUPERFAMILY SSF52172 944 1064 1.1E-36 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SMART SM00387 514 630 1.1E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SMART SM00448 945 1062 5.8E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SMART SM00448 777 895 5.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 608 5.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 569 5.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 583 5.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 627 5.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SUPERFAMILY SSF52172 777 901 1.32E-34 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Gene3D G3DSA:1.10.287.130 362 465 1.3E-29 T 14-10-2018 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SUPERFAMILY SSF47384 390 467 1.39E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Pfam PF00072 Response regulator receiver domain 779 895 4.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Pfam PF00072 Response regulator receiver domain 947 1062 4.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Gene3D G3DSA:3.30.565.10 467 631 1.6E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 629 8.8E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SMART SM00388 402 467 3.1E-26 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Gene3D G3DSA:3.40.50.12330 936 1002 1.4E-21 T 14-10-2018 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Gene3D G3DSA:3.40.50.12330 769 834 2.1E-17 T 14-10-2018 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 SUPERFAMILY SSF55874 456 626 4.58E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Gene3D G3DSA:3.40.50.2300 835 903 5.9E-24 T 14-10-2018 VS_II0864 e52f524cfc23c20fcfb312c934824924 1067 Gene3D G3DSA:3.40.50.2300 1003 1067 2.9E-21 T 14-10-2018 VS_II1479 07bda53206994f98ba9794678c8b2379 362 SUPERFAMILY SSF51395 1 362 2.9E-120 T 14-10-2018 VS_II1479 07bda53206994f98ba9794678c8b2379 362 Gene3D G3DSA:3.20.20.70 1 362 3.4E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II1479 07bda53206994f98ba9794678c8b2379 362 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 2.8E-93 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VS_0102 9152736ff3c4735557102a8024469981 135 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 133 17.939 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VS_0102 9152736ff3c4735557102a8024469981 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.2E-27 T 14-10-2018 VS_0102 9152736ff3c4735557102a8024469981 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.2E-27 T 14-10-2018 VS_0102 9152736ff3c4735557102a8024469981 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.2E-27 T 14-10-2018 VS_0102 9152736ff3c4735557102a8024469981 135 Pfam PF02416 mttA/Hcf106 family 4 32 1.4E-4 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VS_0102 9152736ff3c4735557102a8024469981 135 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 6.5E-32 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VS_0918 ca9d786673b402f66bf112efb824454e 199 Gene3D G3DSA:3.40.1360.10 78 199 3.2E-39 T 14-10-2018 VS_0918 ca9d786673b402f66bf112efb824454e 199 SMART SM00493 81 166 1.7E-17 T 14-10-2018 IPR006171 TOPRIM domain VS_0918 ca9d786673b402f66bf112efb824454e 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VS_0918 ca9d786673b402f66bf112efb824454e 199 Gene3D G3DSA:1.10.8.420 1 53 2.9E-19 T 14-10-2018 VS_0918 ca9d786673b402f66bf112efb824454e 199 Pfam PF02132 RecR protein 41 77 4.8E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VS_0918 ca9d786673b402f66bf112efb824454e 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.295 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VS_0918 ca9d786673b402f66bf112efb824454e 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 2.8E-78 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VS_0918 ca9d786673b402f66bf112efb824454e 199 Pfam PF13662 Toprim domain 82 172 1.9E-23 T 14-10-2018 IPR006171 TOPRIM domain VS_0918 ca9d786673b402f66bf112efb824454e 199 SUPERFAMILY SSF111304 2 199 3.66E-72 T 14-10-2018 IPR023627 Recombination protein RecR VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 Pfam PF03466 LysR substrate binding domain 95 295 2.8E-19 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 5.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 Gene3D G3DSA:3.40.190.10 169 267 2.3E-49 T 14-10-2018 VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 SUPERFAMILY SSF53850 88 294 8.69E-36 T 14-10-2018 VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 Gene3D G3DSA:1.10.10.10 1 86 3.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 SUPERFAMILY SSF46785 4 83 2.3E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0871 9425b146ba5d28576847ce2efe6697d7 301 Gene3D G3DSA:3.40.190.10 88 290 2.3E-49 T 14-10-2018 VS_1126 fbf8553ba8c0e46e4d3eceab9f63d905 270 Pfam PF00005 ABC transporter 31 178 2.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1126 fbf8553ba8c0e46e4d3eceab9f63d905 270 SUPERFAMILY SSF52540 15 241 2.98E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1126 fbf8553ba8c0e46e4d3eceab9f63d905 270 SMART SM00382 39 236 5.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1126 fbf8553ba8c0e46e4d3eceab9f63d905 270 Gene3D G3DSA:3.40.50.300 15 267 1.0E-67 T 14-10-2018 VS_1126 fbf8553ba8c0e46e4d3eceab9f63d905 270 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1232 e7663628c494d14af12038a36995b4ea 104 PIRSF PIRSF029143 2 104 6.2E-45 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VS_1232 e7663628c494d14af12038a36995b4ea 104 Pfam PF04266 ASCH domain 7 95 2.3E-15 T 14-10-2018 IPR007374 ASCH domain VS_1232 e7663628c494d14af12038a36995b4ea 104 SUPERFAMILY SSF88697 4 104 5.59E-35 T 14-10-2018 IPR015947 PUA-like superfamily VS_1232 e7663628c494d14af12038a36995b4ea 104 Gene3D G3DSA:2.30.130.30 2 104 1.3E-45 T 14-10-2018 VS_1232 e7663628c494d14af12038a36995b4ea 104 SMART SM01022 7 104 1.1E-26 T 14-10-2018 IPR007374 ASCH domain VS_1232 e7663628c494d14af12038a36995b4ea 104 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 30.698 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VS_1795 b229116d2a01e23cac6ed0f8d61fb77d 457 Pfam PF04317 YcjX-like family, DUF463 20 456 2.0E-183 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VS_1795 b229116d2a01e23cac6ed0f8d61fb77d 457 PIRSF PIRSF019381 1 457 2.7E-196 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 SUPERFAMILY SSF55174 3 206 6.67E-71 T 14-10-2018 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 SMART SM00363 96 160 5.2E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 Pfam PF01479 S4 domain 97 143 1.2E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 Gene3D G3DSA:3.10.290.10 103 191 6.4E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.2E-83 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 Gene3D G3DSA:1.10.1050.10 1 102 2.9E-44 T 14-10-2018 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 4.3E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 SMART SM01390 3 95 1.9E-49 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.938 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VS_2808 c7fbd89da16c8f8ec01d47eeeee28104 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2668 fb3d35df3832e68c23d72f31a79eb5dd 270 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 207 4.2E-43 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VS_2668 fb3d35df3832e68c23d72f31a79eb5dd 270 SUPERFAMILY SSF53790 2 230 1.7E-62 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VS_2668 fb3d35df3832e68c23d72f31a79eb5dd 270 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_2668 fb3d35df3832e68c23d72f31a79eb5dd 270 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 248 8.2E-97 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 VS_2668 fb3d35df3832e68c23d72f31a79eb5dd 270 Gene3D G3DSA:3.30.950.10 111 229 1.5E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VS_2668 fb3d35df3832e68c23d72f31a79eb5dd 270 Gene3D G3DSA:3.40.1010.10 1 110 3.8E-27 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VS_II1083 78447da27cb429b0f68a2974323251d9 228 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 27 227 27.13 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1083 78447da27cb429b0f68a2974323251d9 228 Gene3D G3DSA:3.20.20.70 18 227 2.1E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II1083 78447da27cb429b0f68a2974323251d9 228 SUPERFAMILY SSF51391 25 226 5.36E-65 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1083 78447da27cb429b0f68a2974323251d9 228 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 28 222 3.1E-63 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1083 78447da27cb429b0f68a2974323251d9 228 Pfam PF02581 Thiamine monophosphate synthase 29 209 7.0E-63 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 11 595 41.992 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 Gene3D G3DSA:1.20.1640.10 434 573 2.8E-6 T 14-10-2018 VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 127 581 1.2E-121 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 Gene3D G3DSA:3.30.1360.200 274 411 6.8E-42 T 14-10-2018 VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 SUPERFAMILY SSF82866 390 587 2.09E-36 T 14-10-2018 VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 Pfam PF02355 Protein export membrane protein 413 582 1.0E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 Pfam PF13721 SecD export protein N-terminal TM region 11 107 1.8E-14 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 Pfam PF07549 SecD/SecF GG Motif 119 142 1.6E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 331 573 3.0E-70 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II0241 06306ea9647b3c2ee2a4b15d5d78efd9 595 Gene3D G3DSA:3.30.70.3400 220 417 6.8E-42 T 14-10-2018 VS_1255 09486ea24972489130d5397063e24589 204 SUPERFAMILY SSF82185 48 161 2.29E-23 T 14-10-2018 VS_1255 09486ea24972489130d5397063e24589 204 Gene3D G3DSA:3.90.930.1 37 169 4.1E-17 T 14-10-2018 VS_1255 09486ea24972489130d5397063e24589 204 Pfam PF07661 MORN repeat variant 96 117 4.1E-4 T 14-10-2018 IPR011652 MORN variant VS_1255 09486ea24972489130d5397063e24589 204 Pfam PF07661 MORN repeat variant 74 92 0.0055 T 14-10-2018 IPR011652 MORN variant VS_1255 09486ea24972489130d5397063e24589 204 Pfam PF07661 MORN repeat variant 145 163 0.091 T 14-10-2018 IPR011652 MORN variant VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 SUPERFAMILY SSF54631 192 329 3.79E-24 T 14-10-2018 VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 Gene3D G3DSA:3.30.465.10 339 418 3.5E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 SMART SM01091 342 420 2.7E-21 T 14-10-2018 IPR005170 Transporter-associated domain VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 Gene3D G3DSA:3.10.580.10 201 330 3.8E-43 T 14-10-2018 VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 Pfam PF00571 CBS domain 279 326 0.0011 T 14-10-2018 IPR000644 CBS domain VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 Pfam PF01595 Domain of unknown function DUF21 13 181 2.1E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 Pfam PF03471 Transporter associated domain 344 417 7.7E-16 T 14-10-2018 IPR005170 Transporter-associated domain VS_2561 bff206a60bd2e3ff1c054a75c3ac139b 423 SUPERFAMILY SSF56176 339 418 1.55E-19 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VS_0417 9d60488b028f31083c9216555d2d50a1 476 SUPERFAMILY SSF53613 12 304 6.7E-59 T 14-10-2018 IPR029056 Ribokinase-like VS_0417 9d60488b028f31083c9216555d2d50a1 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.0E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VS_0417 9d60488b028f31083c9216555d2d50a1 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 3.3E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VS_0417 9d60488b028f31083c9216555d2d50a1 476 Gene3D G3DSA:3.40.50.620 322 474 2.5E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0417 9d60488b028f31083c9216555d2d50a1 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.818 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VS_0417 9d60488b028f31083c9216555d2d50a1 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 2.9E-61 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VS_0417 9d60488b028f31083c9216555d2d50a1 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 3.3E-124 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VS_0417 9d60488b028f31083c9216555d2d50a1 476 Pfam PF01467 Cytidylyltransferase-like 345 469 4.2E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VS_0417 9d60488b028f31083c9216555d2d50a1 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VS_0417 9d60488b028f31083c9216555d2d50a1 476 SUPERFAMILY SSF52374 340 471 3.66E-23 T 14-10-2018 VS_0417 9d60488b028f31083c9216555d2d50a1 476 Gene3D G3DSA:3.40.1190.20 5 310 1.4E-111 T 14-10-2018 IPR029056 Ribokinase-like VS_3086 116f77fc58fb42343ec327b8060f843c 286 Pfam PF05114 Protein of unknown function (DUF692) 9 273 2.9E-103 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 VS_3086 116f77fc58fb42343ec327b8060f843c 286 SUPERFAMILY SSF51658 30 255 1.33E-9 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VS_3086 116f77fc58fb42343ec327b8060f843c 286 Gene3D G3DSA:3.20.20.150 6 285 2.4E-83 T 14-10-2018 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 205 5.8E-27 T 14-10-2018 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 119 132 1.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 1.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 23 34 1.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 189 1.0E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 SUPERFAMILY SSF56784 24 212 1.84E-39 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 204 6.2E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 Gene3D G3DSA:1.10.150.240 38 105 1.8E-41 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_II0804 8cf98032ddffee108c3c7e7c9dba8938 259 Gene3D G3DSA:3.40.50.1000 26 207 1.8E-41 T 14-10-2018 IPR023214 HAD superfamily VS_II0496 05873c2c588756579ed44ee964f950a7 361 Pfam PF07995 Glucose / Sorbosone dehydrogenase 35 358 3.3E-112 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase VS_II0496 05873c2c588756579ed44ee964f950a7 361 SUPERFAMILY SSF50952 25 358 5.62E-39 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 VS_II0496 05873c2c588756579ed44ee964f950a7 361 Gene3D G3DSA:2.120.10.30 21 361 7.5E-98 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 SUPERFAMILY SSF118215 35 423 7.19E-110 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 98 123 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 167 189 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 215 234 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 317 343 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 68 88 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 352 371 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 378 398 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 PRINTS PR00173 Glutamate-aspartate symporter signature 250 269 2.1E-54 T 14-10-2018 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 Gene3D G3DSA:1.10.3860.10 19 439 1.1E-117 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VS_1974 6d8fbb712693bd7d2dbf541d1b337a0b 439 Pfam PF00375 Sodium:dicarboxylate symporter family 35 423 1.0E-118 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 Gene3D G3DSA:3.30.450.20 36 212 8.1E-39 T 14-10-2018 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 Pfam PF00672 HAMP domain 234 283 3.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 SMART SM00283 302 563 1.3E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 SUPERFAMILY SSF58104 255 564 1.12E-77 T 14-10-2018 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 Pfam PF17200 Single Cache domain 2 53 198 6.9E-32 T 14-10-2018 IPR033480 Single Cache domain 2 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 Gene3D G3DSA:1.10.287.950 232 564 3.4E-75 T 14-10-2018 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 530 1.2E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 SMART SM01049 49 140 2.9E-20 T 14-10-2018 IPR033480 Single Cache domain 2 VS_1536 b967109eef8e02b3d0d4e693729ff4c4 564 SMART SM00304 233 287 2.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1488 a72c08b321caff9c825c445e148375db 344 Gene3D G3DSA:3.30.565.10 204 339 1.6E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1488 a72c08b321caff9c825c445e148375db 344 SMART SM00387 243 341 8.4E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1488 a72c08b321caff9c825c445e148375db 344 Pfam PF06580 Histidine kinase 150 228 5.7E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VS_II1488 a72c08b321caff9c825c445e148375db 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 294 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1488 a72c08b321caff9c825c445e148375db 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1488 a72c08b321caff9c825c445e148375db 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 316 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1488 a72c08b321caff9c825c445e148375db 344 SUPERFAMILY SSF55874 208 339 3.8E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1488 a72c08b321caff9c825c445e148375db 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 250 340 4.3E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 SMART SM00387 353 459 7.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 Gene3D G3DSA:3.30.565.10 311 460 1.5E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 Gene3D G3DSA:1.10.287.130 204 308 8.5E-6 T 14-10-2018 VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 SUPERFAMILY SSF55874 317 458 2.36E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 445 6.1E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0030 abe9b8b7cb728d713dc1d80cfd8cb503 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2800 d61c6a74ac66b56da350ed2c491c7a02 282 Pfam PF00892 EamA-like transporter family 6 137 8.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_2800 d61c6a74ac66b56da350ed2c491c7a02 282 Pfam PF00892 EamA-like transporter family 143 268 5.1E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_2800 d61c6a74ac66b56da350ed2c491c7a02 282 SUPERFAMILY SSF103481 40 141 3.92E-13 T 14-10-2018 VS_2800 d61c6a74ac66b56da350ed2c491c7a02 282 SUPERFAMILY SSF103481 178 276 1.28E-12 T 14-10-2018 VS_2261 36981afb752967e41efdbd8cc9f96a83 378 PIRSF PIRSF038994 1 378 1.2E-123 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VS_2261 36981afb752967e41efdbd8cc9f96a83 378 Pfam PF01979 Amidohydrolase family 51 374 1.5E-36 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VS_2261 36981afb752967e41efdbd8cc9f96a83 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 4.5E-153 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VS_2261 36981afb752967e41efdbd8cc9f96a83 378 SUPERFAMILY SSF51556 54 347 1.98E-100 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_2261 36981afb752967e41efdbd8cc9f96a83 378 SUPERFAMILY SSF51338 1 53 2.31E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_2261 36981afb752967e41efdbd8cc9f96a83 378 Gene3D G3DSA:3.20.20.140 55 341 3.7E-143 T 14-10-2018 VS_2261 36981afb752967e41efdbd8cc9f96a83 378 Gene3D G3DSA:2.30.40.10 6 373 3.7E-143 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_2129 463e7f13fe674142145825f8bd4095c0 161 SUPERFAMILY SSF54909 71 159 3.75E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_2129 463e7f13fe674142145825f8bd4095c0 161 SMART SM00344 11 120 2.7E-34 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_2129 463e7f13fe674142145825f8bd4095c0 161 SUPERFAMILY SSF46785 10 71 3.24E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2129 463e7f13fe674142145825f8bd4095c0 161 Pfam PF13404 AsnC-type helix-turn-helix domain 11 52 6.9E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2129 463e7f13fe674142145825f8bd4095c0 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 5.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2129 463e7f13fe674142145825f8bd4095c0 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 5.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2129 463e7f13fe674142145825f8bd4095c0 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 5.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_2129 463e7f13fe674142145825f8bd4095c0 161 Pfam PF01037 Lrp/AsnC ligand binding domain 79 149 1.5E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_2129 463e7f13fe674142145825f8bd4095c0 161 Gene3D G3DSA:3.30.70.920 63 156 1.6E-16 T 14-10-2018 VS_2129 463e7f13fe674142145825f8bd4095c0 161 Gene3D G3DSA:1.10.10.10 1 62 9.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 2.7E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 SUPERFAMILY SSF54768 8 75 3.14E-24 T 14-10-2018 VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.636 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 SUPERFAMILY SSF54211 79 158 1.42E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 8.9E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 Gene3D G3DSA:3.30.160.20 1 73 6.4E-33 T 14-10-2018 VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 1.4E-68 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VS_2814 e640e4c04a5d6c718e9fbd60ec79e222 166 Gene3D G3DSA:3.30.230.10 74 166 1.4E-35 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_1640 1e2e43ba2127e1f08581e228eabb2740 304 Gene3D G3DSA:1.10.10.10 1 85 2.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1640 1e2e43ba2127e1f08581e228eabb2740 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 61 1.6E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1640 1e2e43ba2127e1f08581e228eabb2740 304 SUPERFAMILY SSF53850 88 293 6.52E-33 T 14-10-2018 VS_1640 1e2e43ba2127e1f08581e228eabb2740 304 Gene3D G3DSA:3.40.190.10 169 266 4.3E-37 T 14-10-2018 VS_1640 1e2e43ba2127e1f08581e228eabb2740 304 SUPERFAMILY SSF46785 3 81 2.18E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1640 1e2e43ba2127e1f08581e228eabb2740 304 Gene3D G3DSA:3.40.190.10 88 290 4.3E-37 T 14-10-2018 VS_1640 1e2e43ba2127e1f08581e228eabb2740 304 Pfam PF03466 LysR substrate binding domain 94 291 5.3E-16 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0715 ba10e1f9ef5a5669b2a3cd980efdc6fe 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.9E-36 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VS_0715 ba10e1f9ef5a5669b2a3cd980efdc6fe 105 Gene3D G3DSA:3.30.460.10 3 105 1.6E-35 T 14-10-2018 VS_0715 ba10e1f9ef5a5669b2a3cd980efdc6fe 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 23.809 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VS_0715 ba10e1f9ef5a5669b2a3cd980efdc6fe 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.1E-26 T 14-10-2018 VS_0715 ba10e1f9ef5a5669b2a3cd980efdc6fe 105 SUPERFAMILY SSF81301 5 105 2.29E-35 T 14-10-2018 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 Gene3D G3DSA:2.40.50.140 130 188 1.2E-26 T 14-10-2018 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 SMART SM00841 131 186 8.5E-30 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.522 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.1E-24 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 PIRSF PIRSF005901 2 188 3.6E-61 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 SMART SM01185 69 123 6.0E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 Gene3D G3DSA:2.40.50.140 66 127 8.3E-28 T 14-10-2018 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 Gene3D G3DSA:2.30.30.30 1 64 5.6E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 SUPERFAMILY SSF50249 70 128 2.01E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 SUPERFAMILY SSF50249 130 187 8.74E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 SUPERFAMILY SSF50104 2 63 1.05E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 2.2E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 1.2E-24 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VS_0244 4f3fb94bbf10bca4a285b59ed572c3d1 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 9.7E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VS_II1207 ae600513222631697f4a4f0665952b9e 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.967 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VS_II1207 ae600513222631697f4a4f0665952b9e 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 3.3E-68 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VS_II1207 ae600513222631697f4a4f0665952b9e 301 Gene3D G3DSA:3.30.1490.20 115 181 3.9E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_II1207 ae600513222631697f4a4f0665952b9e 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 7.6E-84 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VS_II1207 ae600513222631697f4a4f0665952b9e 301 Gene3D G3DSA:3.30.470.80 182 299 7.6E-43 T 14-10-2018 VS_II1207 ae600513222631697f4a4f0665952b9e 301 SUPERFAMILY SSF56059 89 290 2.65E-50 T 14-10-2018 VS_II1207 ae600513222631697f4a4f0665952b9e 301 Gene3D G3DSA:3.40.50.20 1 114 4.0E-40 T 14-10-2018 VS_0854 b484b555856f864ee6079b4f2ceb9fb5 160 SUPERFAMILY SSF82093 30 141 1.07E-37 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VS_0854 b484b555856f864ee6079b4f2ceb9fb5 160 Gene3D G3DSA:2.40.50.140 30 141 3.2E-38 T 14-10-2018 VS_0854 b484b555856f864ee6079b4f2ceb9fb5 160 Pfam PF03100 CcmE 4 134 1.5E-43 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VS_0854 b484b555856f864ee6079b4f2ceb9fb5 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 31.466 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VS_1646 89b5479246ba48373bf04a772b888381 1345 Pfam PF00271 Helicase conserved C-terminal domain 1102 1146 2.8E-5 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1646 89b5479246ba48373bf04a772b888381 1345 SUPERFAMILY SSF52540 618 1190 3.28E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1646 89b5479246ba48373bf04a772b888381 1345 Gene3D G3DSA:3.40.50.300 1057 1182 1.0E-7 T 14-10-2018 VS_1646 89b5479246ba48373bf04a772b888381 1345 SMART SM00490 1075 1148 0.0056 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1406 1e277511392fed9dee0e8dc71abe91a0 352 PIRSF PIRSF001361 1 352 2.5E-156 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VS_1406 1e277511392fed9dee0e8dc71abe91a0 352 Pfam PF00793 DAHP synthetase I family 42 338 2.4E-98 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_1406 1e277511392fed9dee0e8dc71abe91a0 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.0E-159 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VS_1406 1e277511392fed9dee0e8dc71abe91a0 352 Gene3D G3DSA:3.20.20.70 1 350 1.1E-152 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1406 1e277511392fed9dee0e8dc71abe91a0 352 SUPERFAMILY SSF51569 8 347 3.76E-129 T 14-10-2018 VS_0282 e389519aaaf3689064ed1cf134c88d04 150 SUPERFAMILY SSF55658 1 57 4.53E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VS_0282 e389519aaaf3689064ed1cf134c88d04 150 Gene3D G3DSA:3.40.5.10 1 50 2.1E-23 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0282 e389519aaaf3689064ed1cf134c88d04 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0282 e389519aaaf3689064ed1cf134c88d04 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 148 3.3E-23 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal VS_0282 e389519aaaf3689064ed1cf134c88d04 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.9E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0282 e389519aaaf3689064ed1cf134c88d04 150 SUPERFAMILY SSF55653 60 148 2.09E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VS_0282 e389519aaaf3689064ed1cf134c88d04 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.075 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0282 e389519aaaf3689064ed1cf134c88d04 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 9.0E-54 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0282 e389519aaaf3689064ed1cf134c88d04 150 Gene3D G3DSA:3.10.430.100 61 149 1.4E-28 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 Pfam PF02311 AraC-like ligand binding domain 13 135 4.8E-21 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 SUPERFAMILY SSF46689 166 215 1.84E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 Gene3D G3DSA:2.60.120.10 1 88 1.0E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 SMART SM00342 182 264 2.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 SUPERFAMILY SSF46689 219 263 1.16E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 SUPERFAMILY SSF51215 23 140 8.5E-19 T 14-10-2018 IPR037923 Transcription regulator HTH-like VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 Pfam PF12833 Helix-turn-helix domain 190 262 4.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_3079 b1a6d54266c1f499ad9d19ac652161ee 264 Gene3D G3DSA:1.10.10.60 166 264 1.9E-25 T 14-10-2018 VS_2105 2e12620b7e480299bea75cf5ba3886ed 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.0E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2105 2e12620b7e480299bea75cf5ba3886ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.4E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2105 2e12620b7e480299bea75cf5ba3886ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.4E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_2105 2e12620b7e480299bea75cf5ba3886ed 204 SUPERFAMILY SSF46689 5 65 6.48E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2105 2e12620b7e480299bea75cf5ba3886ed 204 Gene3D G3DSA:1.10.10.60 5 57 2.7E-20 T 14-10-2018 VS_2105 2e12620b7e480299bea75cf5ba3886ed 204 Gene3D G3DSA:1.10.357.10 60 202 3.2E-22 T 14-10-2018 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 Gene3D G3DSA:3.30.460.10 12 149 3.5E-29 T 14-10-2018 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 177 240 5.0E-12 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 Hamap MF_01261 Multifunctional CCA protein [cca]. 29 435 51.851 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 Pfam PF01743 Poly A polymerase head domain 32 150 3.3E-17 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 Pfam PF01966 HD domain 257 353 1.6E-8 T 14-10-2018 IPR006674 HD domain VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 SUPERFAMILY SSF81301 22 147 5.89E-31 T 14-10-2018 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 SUPERFAMILY SSF81891 148 431 6.02E-54 T 14-10-2018 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 Gene3D G3DSA:1.10.3090.10 150 435 4.0E-43 T 14-10-2018 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 PIRSF PIRSF000813 29 436 1.1E-195 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VS_0407 e789931a0a05438fbb8a5f6204de13fd 438 Hamap MF_01262 CCA-adding enzyme [cca]. 29 429 42.519 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VS_II0879 f0275fb380e130e40db983795760bf5c 524 SUPERFAMILY SSF53649 36 516 8.0E-126 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_II0879 f0275fb380e130e40db983795760bf5c 524 Gene3D G3DSA:3.40.720.10 40 405 2.2E-101 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_II0879 f0275fb380e130e40db983795760bf5c 524 Pfam PF00884 Sulfatase 40 365 4.0E-63 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VS_II0879 f0275fb380e130e40db983795760bf5c 524 Gene3D G3DSA:3.30.1120.10 407 471 2.2E-101 T 14-10-2018 VS_II0879 f0275fb380e130e40db983795760bf5c 524 Pfam PF14707 C-terminal region of aryl-sulfatase 406 503 7.4E-8 T 14-10-2018 VS_II0119 f3597bf89243310d37d03afd9e756cf8 351 PIRSF PIRSF005508 1 350 5.1E-134 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VS_II0119 f3597bf89243310d37d03afd9e756cf8 351 Gene3D G3DSA:1.20.1530.20 3 334 6.0E-22 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VS_II0119 f3597bf89243310d37d03afd9e756cf8 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 5 334 4.4E-136 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VS_II0119 f3597bf89243310d37d03afd9e756cf8 351 Pfam PF01758 Sodium Bile acid symporter family 50 246 1.4E-58 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 Pfam PF12833 Helix-turn-helix domain 17 95 1.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 Gene3D G3DSA:3.20.80.10 123 289 1.6E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 63 78 1.1E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 78 94 1.1E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 SUPERFAMILY SSF46689 48 97 3.27E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 SUPERFAMILY SSF55136 124 289 2.09E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 Gene3D G3DSA:1.10.10.60 1 44 2.4E-16 T 14-10-2018 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 Gene3D G3DSA:1.10.10.60 45 99 5.0E-16 T 14-10-2018 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 48 90 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 SUPERFAMILY SSF46689 2 45 1.03E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 Pfam PF14526 Integron-associated effector binding protein 126 287 2.6E-16 T 14-10-2018 IPR029441 Integron-associated effector binding protein VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 SMART SM00342 11 94 1.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0500 0ff7df43f66d6cc494f2c8c1b73face2 290 SMART SM00871 123 288 7.7E-17 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VS_0805 c8f1db3e55bc98549eb6deb184ad7499 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 3.4E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VS_0805 c8f1db3e55bc98549eb6deb184ad7499 249 Pfam PF00460 Flagella basal body rod protein 8 35 1.7E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VS_0805 c8f1db3e55bc98549eb6deb184ad7499 249 SUPERFAMILY SSF117143 77 207 2.48E-17 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VS_0805 c8f1db3e55bc98549eb6deb184ad7499 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 2.3E-53 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VS_0805 c8f1db3e55bc98549eb6deb184ad7499 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 8.0E-34 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 SUPERFAMILY SSF46894 130 204 7.82E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 SMART SM00421 145 202 5.3E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 SMART SM00448 4 117 1.4E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 Pfam PF00072 Response regulator receiver domain 6 117 2.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 Gene3D G3DSA:3.40.50.12740 4 206 6.8E-67 T 14-10-2018 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0602 80129f9aed13a2795130dba3bb5f1bdf 210 SUPERFAMILY SSF52172 5 134 1.32E-34 T 14-10-2018 IPR011006 CheY-like superfamily VS_0270 4320899480a13b75a7d988dff4ff1f1e 88 SUPERFAMILY SSF50182 7 69 1.62E-24 T 14-10-2018 IPR010920 LSM domain superfamily VS_0270 4320899480a13b75a7d988dff4ff1f1e 88 Pfam PF17209 Hfq protein 7 68 4.3E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VS_0270 4320899480a13b75a7d988dff4ff1f1e 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VS_0270 4320899480a13b75a7d988dff4ff1f1e 88 Gene3D G3DSA:2.30.30.100 1 72 1.2E-34 T 14-10-2018 VS_0270 4320899480a13b75a7d988dff4ff1f1e 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 7.0E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 4.5E-27 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 Gene3D G3DSA:3.40.50.720 23 110 2.1E-32 T 14-10-2018 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 Gene3D G3DSA:3.90.190.20 326 485 1.4E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.58 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 SUPERFAMILY SSF53623 108 322 8.11E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 SUPERFAMILY SSF53244 326 473 3.11E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.5E-185 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 1.4E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 SUPERFAMILY SSF51984 16 109 1.26E-28 T 14-10-2018 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 Pfam PF08245 Mur ligase middle domain 127 307 2.1E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VS_0451 7e30cb0d9a49c9e100fbc0dcd66bc7b5 486 Gene3D G3DSA:3.40.1190.10 111 325 2.4E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_II0824 53b592d8f2aae65f942258a4168af951 170 Gene3D G3DSA:3.30.420.10 127 170 4.7E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_II0824 53b592d8f2aae65f942258a4168af951 170 Pfam PF00665 Integrase core domain 134 170 1.8E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_II0824 53b592d8f2aae65f942258a4168af951 170 SUPERFAMILY SSF53098 131 170 5.5E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_II0824 53b592d8f2aae65f942258a4168af951 170 Pfam PF13276 HTH-like domain 54 108 3.3E-20 T 14-10-2018 IPR025948 HTH-like domain VS_II1186 d4e0478d95e945b31560d91fa155d4e3 580 SMART SM00052 362 580 1.4E-12 T 14-10-2018 IPR001633 EAL domain VS_II1186 d4e0478d95e945b31560d91fa155d4e3 580 Pfam PF00563 EAL domain 368 575 3.3E-31 T 14-10-2018 IPR001633 EAL domain VS_II1186 d4e0478d95e945b31560d91fa155d4e3 580 SUPERFAMILY SSF141868 363 577 4.97E-42 T 14-10-2018 IPR035919 EAL domain superfamily VS_II1186 d4e0478d95e945b31560d91fa155d4e3 580 Gene3D G3DSA:3.20.20.450 357 580 2.1E-39 T 14-10-2018 IPR035919 EAL domain superfamily VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 293 448 1.1E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 8.4E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 8.4E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 8.4E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 8.4E-27 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 SUPERFAMILY SSF58104 240 481 1.83E-45 T 14-10-2018 VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 SMART SM00283 223 477 3.1E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1106 881d3c5f33d4dbb983ebf78a56aa9041 486 Gene3D G3DSA:1.10.287.950 180 484 1.2E-48 T 14-10-2018 VS_0454 43b2e31701a8d915f70825b8b6861837 409 SUPERFAMILY SSF55307 204 320 9.39E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 2.2E-136 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VS_0454 43b2e31701a8d915f70825b8b6861837 409 SMART SM00864 13 205 2.4E-113 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VS_0454 43b2e31701a8d915f70825b8b6861837 409 SUPERFAMILY SSF52490 13 208 5.23E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.6E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 396 38.322 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VS_0454 43b2e31701a8d915f70825b8b6861837 409 Gene3D G3DSA:3.30.1330.20 221 327 1.3E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.4E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.4E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.4E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.4E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 SMART SM00865 207 325 7.4E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 Gene3D G3DSA:3.40.50.1440 5 220 1.1E-79 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VS_0454 43b2e31701a8d915f70825b8b6861837 409 Pfam PF12327 FtsZ family, C-terminal domain 222 316 1.3E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VS_0454 43b2e31701a8d915f70825b8b6861837 409 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VS_2812 b0ac40e158a52bcd0cd3dcc2cdb35527 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.128 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VS_2812 b0ac40e158a52bcd0cd3dcc2cdb35527 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.5E-50 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2812 b0ac40e158a52bcd0cd3dcc2cdb35527 144 SUPERFAMILY SSF52080 4 143 9.68E-47 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VS_2812 b0ac40e158a52bcd0cd3dcc2cdb35527 144 Gene3D G3DSA:3.100.10.10 70 144 4.0E-13 T 14-10-2018 VS_2812 b0ac40e158a52bcd0cd3dcc2cdb35527 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2812 b0ac40e158a52bcd0cd3dcc2cdb35527 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.0E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 Pfam PF12804 MobA-like NTP transferase domain 10 132 1.4E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 7 454 42.504 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 SUPERFAMILY SSF51161 257 440 1.57E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 9 457 7.8E-204 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 Gene3D G3DSA:3.90.550.10 4 229 1.7E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 287 319 2.0E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 397 431 1.1E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 405 433 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 SUPERFAMILY SSF53448 6 254 9.1E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_3150 aed6a1a36d01fb73bf46876fd47f7d8d 458 Gene3D G3DSA:2.160.10.10 230 458 6.6E-73 T 14-10-2018 VS_1506 beb1fbd743cfb0fceac790cf76892466 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 5.7E-33 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 VS_1896 0b7bf31ecec6c9019c1d1c3c78f8ad99 139 Pfam PF04940 Sensors of blue-light using FAD 3 94 7.4E-29 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 VS_1896 0b7bf31ecec6c9019c1d1c3c78f8ad99 139 SUPERFAMILY SSF54975 3 134 7.85E-39 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VS_1896 0b7bf31ecec6c9019c1d1c3c78f8ad99 139 SMART SM01034 3 95 7.4E-38 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 VS_1896 0b7bf31ecec6c9019c1d1c3c78f8ad99 139 Gene3D G3DSA:3.30.70.100 2 129 2.8E-33 T 14-10-2018 VS_1075 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VS_1075 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_1075 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1075 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VS_1075 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VS_1075 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 14-10-2018 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.076 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 Gene3D G3DSA:1.10.15.40 38 81 5.7E-8 T 14-10-2018 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.2E-18 T 14-10-2018 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.1E-86 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 Pfam PF04060 Putative Fe-S cluster 44 75 7.9E-15 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 SUPERFAMILY SSF54862 37 173 2.07E-30 T 14-10-2018 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 PIRSF PIRSF005784 3 188 5.2E-86 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VS_0977 74ab89d34f1ef3aac4123aa6d01718f9 197 Gene3D G3DSA:3.30.70.20 82 181 1.5E-22 T 14-10-2018 VS_II1300 78bac611957cc08558d48f582c17fae6 553 SMART SM00304 222 276 4.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1300 78bac611957cc08558d48f582c17fae6 553 SMART SM01049 44 130 1.3E-16 T 14-10-2018 IPR033480 Single Cache domain 2 VS_II1300 78bac611957cc08558d48f582c17fae6 553 Gene3D G3DSA:1.10.287.950 221 553 2.6E-67 T 14-10-2018 VS_II1300 78bac611957cc08558d48f582c17fae6 553 Gene3D G3DSA:3.30.450.20 28 202 8.6E-34 T 14-10-2018 VS_II1300 78bac611957cc08558d48f582c17fae6 553 SMART SM00283 291 552 1.3E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1300 78bac611957cc08558d48f582c17fae6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 12 37 6.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1300 78bac611957cc08558d48f582c17fae6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 6.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1300 78bac611957cc08558d48f582c17fae6 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 6.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II1300 78bac611957cc08558d48f582c17fae6 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 516 2.3E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1300 78bac611957cc08558d48f582c17fae6 553 Pfam PF17200 Single Cache domain 2 50 188 1.3E-25 T 14-10-2018 IPR033480 Single Cache domain 2 VS_II1300 78bac611957cc08558d48f582c17fae6 553 SUPERFAMILY SSF58104 244 553 1.57E-72 T 14-10-2018 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 Gene3D G3DSA:1.10.287.950 374 705 4.1E-71 T 14-10-2018 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 Gene3D G3DSA:3.30.450.20 75 233 4.9E-25 T 14-10-2018 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 488 671 1.3E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 SMART SM00283 443 704 9.7E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 Pfam PF02743 Cache domain 48 324 1.5E-16 T 14-10-2018 IPR033479 Double Cache domain 1 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 Gene3D G3DSA:3.30.450.20 234 333 4.9E-25 T 14-10-2018 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 SMART SM00304 374 428 5.8E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 Pfam PF00672 HAMP domain 375 425 1.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1062 c69812ac09c96e165c9ef6172a59b2a8 705 SUPERFAMILY SSF58104 396 705 2.62E-73 T 14-10-2018 VS_0183 8c445bd9207e1c56cfe05e9cfcbeb710 78 SUPERFAMILY SSF143800 2 76 5.49E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0183 8c445bd9207e1c56cfe05e9cfcbeb710 78 Gene3D G3DSA:2.30.170.40 2 78 1.1E-32 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0183 8c445bd9207e1c56cfe05e9cfcbeb710 78 Pfam PF00830 Ribosomal L28 family 3 62 5.0E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0183 8c445bd9207e1c56cfe05e9cfcbeb710 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0183 8c445bd9207e1c56cfe05e9cfcbeb710 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.292 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_II1076 9a7580ff0de213b8b4611524a17445b1 373 Gene3D G3DSA:2.40.30.170 234 352 7.7E-24 T 14-10-2018 VS_II1076 9a7580ff0de213b8b4611524a17445b1 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 292 5.2E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II1076 9a7580ff0de213b8b4611524a17445b1 373 Gene3D G3DSA:2.40.50.100 63 95 3.1E-7 T 14-10-2018 VS_II1076 9a7580ff0de213b8b4611524a17445b1 373 SUPERFAMILY SSF111369 62 185 2.48E-9 T 14-10-2018 VS_II1076 9a7580ff0de213b8b4611524a17445b1 373 Gene3D G3DSA:1.10.287.470 96 113 3.1E-7 T 14-10-2018 VS_II1076 9a7580ff0de213b8b4611524a17445b1 373 SUPERFAMILY SSF111369 194 298 2.22E-7 T 14-10-2018 VS_II1076 9a7580ff0de213b8b4611524a17445b1 373 Gene3D G3DSA:1.10.287.470 121 189 1.8E-8 T 14-10-2018 VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 Pfam PF13899 Thioredoxin-like 516 588 2.3E-10 T 14-10-2018 VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 Gene3D G3DSA:3.40.30.10 494 620 8.0E-33 T 14-10-2018 VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 Pfam PF11412 Disulphide bond corrector protein DsbC 38 148 1.5E-28 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 Gene3D G3DSA:2.60.40.1250 33 162 9.9E-39 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 SUPERFAMILY SSF74863 35 148 1.83E-38 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 229 429 2.6E-19 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 ProSitePatterns PS00194 Thioredoxin family active site. 528 546 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 620 38.15 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VS_2930 3c11f5427f06e3490ca3b07a6c0be427 621 SUPERFAMILY SSF52833 508 617 6.89E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0799 409488830dbe21277454afc2e65e70c7 423 SMART SM00490 265 346 6.4E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0799 409488830dbe21277454afc2e65e70c7 423 Pfam PF00271 Helicase conserved C-terminal domain 241 346 1.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0799 409488830dbe21277454afc2e65e70c7 423 Gene3D G3DSA:3.40.50.300 1 217 1.8E-79 T 14-10-2018 VS_II0799 409488830dbe21277454afc2e65e70c7 423 Pfam PF00270 DEAD/DEAH box helicase 30 202 8.9E-54 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II0799 409488830dbe21277454afc2e65e70c7 423 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II0799 409488830dbe21277454afc2e65e70c7 423 Gene3D G3DSA:3.40.50.300 221 421 8.3E-48 T 14-10-2018 VS_II0799 409488830dbe21277454afc2e65e70c7 423 SUPERFAMILY SSF52540 83 364 2.41E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0799 409488830dbe21277454afc2e65e70c7 423 SMART SM00487 25 229 8.0E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_2370 862bd71e0b24aba752e9f902d59ffebb 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 25.89 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VS_2370 862bd71e0b24aba752e9f902d59ffebb 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.4E-34 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VS_2370 862bd71e0b24aba752e9f902d59ffebb 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 3.0E-19 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 Gene3D G3DSA:2.60.34.10 382 522 7.9E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 Gene3D G3DSA:3.90.640.10 228 315 3.7E-164 T 14-10-2018 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 SUPERFAMILY SSF53067 186 381 3.44E-65 T 14-10-2018 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.6E-282 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 SUPERFAMILY SSF53067 1 182 2.24E-63 T 14-10-2018 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.026 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 Gene3D G3DSA:3.30.420.40 5 378 3.7E-164 T 14-10-2018 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 Gene3D G3DSA:3.30.420.40 179 365 3.7E-164 T 14-10-2018 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.6E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 SUPERFAMILY SSF100920 383 539 2.75E-59 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 SUPERFAMILY SSF100934 534 606 1.45E-5 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 Gene3D G3DSA:1.20.1270.10 523 602 1.2E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 Pfam PF00012 Hsp70 protein 4 601 1.4E-259 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0651 f56ad59dc8c2347a676896954f0d5de0 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 SUPERFAMILY SSF47413 1 60 1.1E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 Gene3D G3DSA:1.10.260.40 1 59 6.2E-22 T 14-10-2018 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 SMART SM00354 1 71 8.6E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 SUPERFAMILY SSF53822 62 329 7.26E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 Pfam PF13377 Periplasmic binding protein-like domain 171 327 7.1E-32 T 14-10-2018 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.6E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.0E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 Gene3D G3DSA:3.40.50.2300 62 303 7.7E-66 T 14-10-2018 VS_II0098 0889e1b23b86c34deeefaecd4474a6b5 332 Gene3D G3DSA:3.40.50.2300 163 292 7.7E-66 T 14-10-2018 VS_0887 4c0ed42689687bef323d7303b1a28179 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.8E-23 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VS_0887 4c0ed42689687bef323d7303b1a28179 399 Pfam PF07670 Nucleoside recognition 87 182 4.6E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_0887 4c0ed42689687bef323d7303b1a28179 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 1.2E-135 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VS_0887 4c0ed42689687bef323d7303b1a28179 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 395 1.3E-70 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VS_II0870 e637a4011e7eacf4152174d1fcd71298 560 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 28 503 3.8E-69 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VS_II0870 e637a4011e7eacf4152174d1fcd71298 560 PIRSF PIRSF031924 1 560 7.2E-190 T 14-10-2018 IPR026263 Alkaline phosphatase, prokaryotic GO:0004035 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_II0870 e637a4011e7eacf4152174d1fcd71298 560 SUPERFAMILY SSF53649 13 543 6.64E-58 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_II0870 e637a4011e7eacf4152174d1fcd71298 560 Gene3D G3DSA:3.30.1360.150 372 496 6.1E-180 T 14-10-2018 VS_II0870 e637a4011e7eacf4152174d1fcd71298 560 Gene3D G3DSA:3.40.720.10 24 553 6.1E-180 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 SUPERFAMILY SSF47598 1 33 3.78E-12 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 Pfam PF03925 SeqA protein C-terminal domain 70 177 4.8E-46 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 Pfam PF17206 SeqA protein N-terminal domain 1 35 3.1E-22 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 Gene3D G3DSA:1.20.1380.10 64 179 2.8E-47 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 40.487 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 SUPERFAMILY SSF82808 65 178 2.62E-47 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 PIRSF PIRSF019401 1 69 1.2E-16 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 PIRSF PIRSF019401 45 179 1.3E-34 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VS_2253 d02ba3dea0f53c2432c4568dcc9c9904 179 Gene3D G3DSA:1.10.1220.10 1 40 2.0E-21 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VS_II0492 cc1c708c9a2c00f3cf4cd1388d972d9c 498 Pfam PF03577 Peptidase family C69 31 417 5.5E-96 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 VS_II0492 cc1c708c9a2c00f3cf4cd1388d972d9c 498 Gene3D G3DSA:3.60.60.10 32 318 3.1E-14 T 14-10-2018 VS_1978 24d8ebeb25ab3fd2a568111fdadbdc85 270 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 85 99 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1978 24d8ebeb25ab3fd2a568111fdadbdc85 270 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 39 258 5.3E-105 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like VS_1978 24d8ebeb25ab3fd2a568111fdadbdc85 270 SUPERFAMILY SSF55120 40 232 1.02E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1978 24d8ebeb25ab3fd2a568111fdadbdc85 270 Pfam PF00849 RNA pseudouridylate synthase 48 191 1.6E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1978 24d8ebeb25ab3fd2a568111fdadbdc85 270 Gene3D G3DSA:3.30.2350.10 33 233 1.3E-50 T 14-10-2018 VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 Pfam PF02080 TrkA-C domain 309 374 3.1E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 Gene3D G3DSA:3.30.70.1450 228 288 1.7E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 SUPERFAMILY SSF116726 294 377 6.93E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 1.8E-41 T 14-10-2018 IPR006512 YidE/YbjL duplication VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 5.1E-35 T 14-10-2018 IPR006512 YidE/YbjL duplication VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.2E-37 T 14-10-2018 IPR006512 YidE/YbjL duplication VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 9.4E-28 T 14-10-2018 IPR006512 YidE/YbjL duplication VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.552 T 14-10-2018 IPR023017 Transport protein YbjL, putative VS_1837 3df2f0e3954c2021299a3dd2ae1e1370 560 SUPERFAMILY SSF116726 231 285 2.88E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_II0722 00827a75332d1a163c99a71a412ba98e 488 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 3.6E-22 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VS_II0722 00827a75332d1a163c99a71a412ba98e 488 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 481 6.9E-158 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VS_II0722 00827a75332d1a163c99a71a412ba98e 488 Gene3D G3DSA:3.40.50.300 5 247 9.6E-57 T 14-10-2018 VS_II0722 00827a75332d1a163c99a71a412ba98e 488 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 439 1.3E-59 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VS_II0722 00827a75332d1a163c99a71a412ba98e 488 SUPERFAMILY SSF52540 7 240 3.72E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0722 00827a75332d1a163c99a71a412ba98e 488 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 488 199.451 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VS_II0722 00827a75332d1a163c99a71a412ba98e 488 SUPERFAMILY SSF52317 254 448 1.48E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_II0722 00827a75332d1a163c99a71a412ba98e 488 Gene3D G3DSA:3.40.50.880 264 450 1.8E-19 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0497 2bccc0cf49a02ac71644be03ccd32ff3 268 Pfam PF00665 Integrase core domain 111 223 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_0497 2bccc0cf49a02ac71644be03ccd32ff3 268 Gene3D G3DSA:3.30.420.10 109 267 8.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_0497 2bccc0cf49a02ac71644be03ccd32ff3 268 SUPERFAMILY SSF53098 108 263 4.7E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_II0090 2bccc0cf49a02ac71644be03ccd32ff3 268 Pfam PF00665 Integrase core domain 111 223 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_II0090 2bccc0cf49a02ac71644be03ccd32ff3 268 Gene3D G3DSA:3.30.420.10 109 267 8.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_II0090 2bccc0cf49a02ac71644be03ccd32ff3 268 SUPERFAMILY SSF53098 108 263 4.7E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2857 2bccc0cf49a02ac71644be03ccd32ff3 268 Pfam PF00665 Integrase core domain 111 223 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_2857 2bccc0cf49a02ac71644be03ccd32ff3 268 Gene3D G3DSA:3.30.420.10 109 267 8.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2857 2bccc0cf49a02ac71644be03ccd32ff3 268 SUPERFAMILY SSF53098 108 263 4.7E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_0458 2bccc0cf49a02ac71644be03ccd32ff3 268 Pfam PF00665 Integrase core domain 111 223 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_0458 2bccc0cf49a02ac71644be03ccd32ff3 268 Gene3D G3DSA:3.30.420.10 109 267 8.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_0458 2bccc0cf49a02ac71644be03ccd32ff3 268 SUPERFAMILY SSF53098 108 263 4.7E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2326 2bccc0cf49a02ac71644be03ccd32ff3 268 Pfam PF00665 Integrase core domain 111 223 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_2326 2bccc0cf49a02ac71644be03ccd32ff3 268 Gene3D G3DSA:3.30.420.10 109 267 8.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2326 2bccc0cf49a02ac71644be03ccd32ff3 268 SUPERFAMILY SSF53098 108 263 4.7E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1976 2bccc0cf49a02ac71644be03ccd32ff3 268 Pfam PF00665 Integrase core domain 111 223 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_1976 2bccc0cf49a02ac71644be03ccd32ff3 268 Gene3D G3DSA:3.30.420.10 109 267 8.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1976 2bccc0cf49a02ac71644be03ccd32ff3 268 SUPERFAMILY SSF53098 108 263 4.7E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_II0256 6d314615235f5c87e5aff27a335b0b14 443 Gene3D G3DSA:1.20.1250.20 14 435 5.3E-18 T 14-10-2018 VS_II0256 6d314615235f5c87e5aff27a335b0b14 443 SUPERFAMILY SSF103473 15 439 3.14E-26 T 14-10-2018 IPR036259 MFS transporter superfamily VS_0628 c4623cabd77dcfb1e62de597c378419f 487 PIRSF PIRSF000130 1 487 3.1E-198 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 SUPERFAMILY SSF51412 1 477 1.44E-124 T 14-10-2018 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 Gene3D G3DSA:3.20.20.70 1 486 1.5E-208 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 SMART SM01240 7 473 0.0 T 14-10-2018 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 SUPERFAMILY SSF54631 95 203 1.89E-24 T 14-10-2018 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 Pfam PF00571 CBS domain 152 201 5.3E-4 T 14-10-2018 IPR000644 CBS domain VS_0628 c4623cabd77dcfb1e62de597c378419f 487 Pfam PF00571 CBS domain 95 140 3.6E-9 T 14-10-2018 IPR000644 CBS domain VS_0628 c4623cabd77dcfb1e62de597c378419f 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.595 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 SMART SM00116 158 206 1.1E-5 T 14-10-2018 IPR000644 CBS domain VS_0628 c4623cabd77dcfb1e62de597c378419f 487 SMART SM00116 96 144 5.7E-11 T 14-10-2018 IPR000644 CBS domain VS_0628 c4623cabd77dcfb1e62de597c378419f 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 3.8E-193 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VS_0628 c4623cabd77dcfb1e62de597c378419f 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.9E-160 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VS_0447 61c89ee57adcb49e161c41fbc88ef727 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0447 61c89ee57adcb49e161c41fbc88ef727 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.2E-156 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0447 61c89ee57adcb49e161c41fbc88ef727 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.386 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0447 61c89ee57adcb49e161c41fbc88ef727 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0447 61c89ee57adcb49e161c41fbc88ef727 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.5E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VS_0447 61c89ee57adcb49e161c41fbc88ef727 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0884 01037980e5c24c4f4db17a26afea37c9 96 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.105 T 14-10-2018 IPR027354 YcgL domain VS_0884 01037980e5c24c4f4db17a26afea37c9 96 SUPERFAMILY SSF160191 1 91 2.22E-35 T 14-10-2018 IPR038068 YcgL-like superfamily VS_0884 01037980e5c24c4f4db17a26afea37c9 96 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 3.0E-30 T 14-10-2018 IPR027354 YcgL domain VS_0884 01037980e5c24c4f4db17a26afea37c9 96 Pfam PF05166 YcgL domain 3 74 1.1E-31 T 14-10-2018 IPR027354 YcgL domain VS_0884 01037980e5c24c4f4db17a26afea37c9 96 Gene3D G3DSA:3.10.510.20 1 73 3.7E-30 T 14-10-2018 IPR038068 YcgL-like superfamily VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 428 6.6E-90 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 6 422 36.542 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 241 418 1.1E-32 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 Gene3D G3DSA:3.40.50.880 238 407 3.5E-11 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 11 186 1.7E-15 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 SUPERFAMILY SSF52540 8 193 2.52E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 Gene3D G3DSA:3.40.50.300 8 182 7.6E-17 T 14-10-2018 VS_2671 70ea03cc7df0051c499b27e1f50b4349 434 SUPERFAMILY SSF52317 241 424 1.48E-24 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0751 b761bff54d426b437b368dc24404481b 419 PIRSF PIRSF000445 1 419 2.3E-155 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 Gene3D G3DSA:3.40.50.720 159 311 7.8E-44 T 14-10-2018 VS_0751 b761bff54d426b437b368dc24404481b 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 3.6E-49 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VS_0751 b761bff54d426b437b368dc24404481b 419 SUPERFAMILY SSF69742 1 156 8.63E-48 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.5E-143 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 5.9E-23 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 SUPERFAMILY SSF69075 315 416 5.62E-28 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.572 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 SUPERFAMILY SSF51735 161 313 4.88E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0751 b761bff54d426b437b368dc24404481b 419 Gene3D G3DSA:3.30.460.30 1 156 3.3E-57 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_0751 b761bff54d426b437b368dc24404481b 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.4E-51 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 6.0E-42 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 Pfam PF09397 Ftsk gamma domain 979 1039 1.8E-25 T 14-10-2018 IPR018541 FtsK gamma domain VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 Gene3D G3DSA:1.10.10.10 971 1038 4.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 SUPERFAMILY SSF46785 977 1042 7.48E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 SMART SM00843 977 1042 1.4E-37 T 14-10-2018 IPR018541 FtsK gamma domain VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 SUPERFAMILY SSF52540 634 946 5.18E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 Pfam PF01580 FtsK/SpoIIIE family 662 873 7.4E-69 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 Gene3D G3DSA:3.40.50.300 657 959 9.7E-120 T 14-10-2018 VS_2046 9b7eeb32b6d66d981aa5db7f6caf2114 1045 Gene3D G3DSA:3.30.980.40 552 656 1.5E-31 T 14-10-2018 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 4.4E-173 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 PIRSF PIRSF001359 13 358 1.2E-90 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 Gene3D G3DSA:3.20.20.70 2 358 1.7E-139 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 2.3E-85 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 SUPERFAMILY SSF51569 4 356 1.57E-124 T 14-10-2018 VS_2645 42a43a2e9604afbf3a01619470afe50e 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.2E-106 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VS_II0267 49cf669fe85f28d990242ca7d0457542 475 Gene3D G3DSA:3.40.309.10 255 442 4.7E-181 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_II0267 49cf669fe85f28d990242ca7d0457542 475 Gene3D G3DSA:3.40.605.10 17 465 4.7E-181 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_II0267 49cf669fe85f28d990242ca7d0457542 475 SUPERFAMILY SSF53720 16 473 4.45E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_II0267 49cf669fe85f28d990242ca7d0457542 475 Pfam PF00171 Aldehyde dehydrogenase family 16 469 1.8E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_II0267 49cf669fe85f28d990242ca7d0457542 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 6.3E-200 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VS_II0267 49cf669fe85f28d990242ca7d0457542 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VS_II0267 49cf669fe85f28d990242ca7d0457542 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VS_2063 d43fa09f57b5132ad1c6ee9b29b28158 776 Pfam PF00753 Metallo-beta-lactamase superfamily 517 705 2.1E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_2063 d43fa09f57b5132ad1c6ee9b29b28158 776 Pfam PF03772 Competence protein 205 479 2.2E-50 T 14-10-2018 IPR004477 ComEC/Rec2-related protein VS_2063 d43fa09f57b5132ad1c6ee9b29b28158 776 SMART SM00849 519 713 3.6E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_2063 d43fa09f57b5132ad1c6ee9b29b28158 776 SUPERFAMILY SSF56281 507 762 1.49E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_2063 d43fa09f57b5132ad1c6ee9b29b28158 776 Gene3D G3DSA:3.60.15.10 508 759 9.2E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_2063 d43fa09f57b5132ad1c6ee9b29b28158 776 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 115 742 1.2E-118 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VS_2063 d43fa09f57b5132ad1c6ee9b29b28158 776 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 227 405 1.3E-26 T 14-10-2018 IPR004477 ComEC/Rec2-related protein VS_0319 b924fae1091ed9b09ea0b5a0264d7eb5 587 Pfam PF15864 Protein glycosylation ligase 174 199 5.0E-10 T 14-10-2018 IPR031726 Protein glycosylation ligase domain VS_0319 b924fae1091ed9b09ea0b5a0264d7eb5 587 Pfam PF04932 O-Antigen ligase 222 367 5.8E-18 T 14-10-2018 IPR007016 O-antigen ligase-related VS_0319 b924fae1091ed9b09ea0b5a0264d7eb5 587 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 388 575 1.9E-66 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VS_II0397 4cd47a78d37bd4a7e61dc16e7cd0df73 479 SUPERFAMILY SSF53383 62 470 4.98E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0397 4cd47a78d37bd4a7e61dc16e7cd0df73 479 PIRSF PIRSF000521 155 472 4.8E-21 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0397 4cd47a78d37bd4a7e61dc16e7cd0df73 479 PIRSF PIRSF000521 22 163 5.2E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0397 4cd47a78d37bd4a7e61dc16e7cd0df73 479 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 285 322 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0397 4cd47a78d37bd4a7e61dc16e7cd0df73 479 Pfam PF00202 Aminotransferase class-III 62 469 5.9E-82 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II0397 4cd47a78d37bd4a7e61dc16e7cd0df73 479 Gene3D G3DSA:3.90.1150.10 66 464 3.4E-112 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0397 4cd47a78d37bd4a7e61dc16e7cd0df73 479 Gene3D G3DSA:3.40.640.10 94 368 3.4E-112 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 52.494 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 Gene3D G3DSA:3.90.1310.10 65 249 1.2E-50 T 14-10-2018 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 Gene3D G3DSA:3.30.1390.30 86 161 1.2E-50 T 14-10-2018 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 SUPERFAMILY SSF56601 255 619 1.57E-92 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 SUPERFAMILY SSF56519 57 253 6.15E-54 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 6.7E-78 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 Gene3D G3DSA:3.40.710.10 250 627 4.6E-94 T 14-10-2018 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 6.9E-48 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VS_0713 36aa374f3a0e320f1a61c5b1eb58ba4a 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 9.5E-237 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Gene3D G3DSA:3.30.830.10 526 731 1.4E-41 T 14-10-2018 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Gene3D G3DSA:3.30.830.10 48 272 3.2E-66 T 14-10-2018 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 SUPERFAMILY SSF63411 743 942 1.08E-36 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Pfam PF05193 Peptidase M16 inactive domain 686 858 5.7E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Pfam PF05193 Peptidase M16 inactive domain 220 393 3.0E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 SUPERFAMILY SSF63411 50 266 6.5E-57 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 SUPERFAMILY SSF63411 520 722 4.15E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Pfam PF00675 Insulinase (Peptidase family M16) 64 182 7.3E-18 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Pfam PF00675 Insulinase (Peptidase family M16) 541 655 3.5E-12 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Gene3D G3DSA:3.30.830.10 276 471 8.2E-33 T 14-10-2018 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 SUPERFAMILY SSF63411 276 469 1.15E-29 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_2565 6290965afb168ef4754c1c3aeb76cf1b 952 Gene3D G3DSA:3.30.830.10 743 934 1.4E-33 T 14-10-2018 VS_1330 b578dc30611ed0b19d39bfa57746726d 484 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 479 5.7E-111 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Gene3D G3DSA:1.10.1030.10 404 553 1.4E-51 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Gene3D G3DSA:3.40.50.1380 937 1072 7.8E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SMART SM01096 424 547 6.5E-75 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.9E-36 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.9E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SUPERFAMILY SSF56059 673 932 3.54E-103 T 14-10-2018 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Gene3D G3DSA:3.30.470.20 665 934 4.7E-123 T 14-10-2018 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SUPERFAMILY SSF56059 128 401 1.22E-108 T 14-10-2018 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 2.2E-40 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SUPERFAMILY SSF52440 556 675 2.88E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Gene3D G3DSA:3.40.50.20 554 662 2.6E-49 T 14-10-2018 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.07 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.347 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Gene3D G3DSA:3.30.470.20 119 403 1.2E-128 T 14-10-2018 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Pfam PF02142 MGS-like domain 956 1041 9.2E-16 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SMART SM00851 955 1041 1.1E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SUPERFAMILY SSF52440 1 127 8.2E-51 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 Gene3D G3DSA:3.40.50.20 1 116 7.2E-51 T 14-10-2018 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SUPERFAMILY SSF48108 396 554 5.89E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 SUPERFAMILY SSF52335 936 1071 2.09E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VS_0462 82a6c5792891c475e5ab8b1cb7a44ab3 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VS_0148 6efdbe484dfe093b3046ad7b85358503 245 Gene3D G3DSA:3.30.300.130 154 242 2.8E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VS_0148 6efdbe484dfe093b3046ad7b85358503 245 Pfam PF01521 Iron-sulphur cluster biosynthesis 54 151 9.7E-13 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VS_0148 6efdbe484dfe093b3046ad7b85358503 245 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 172 231 4.0E-25 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VS_0148 6efdbe484dfe093b3046ad7b85358503 245 Pfam PF01106 NifU-like domain 164 230 9.1E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VS_0148 6efdbe484dfe093b3046ad7b85358503 245 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 55 245 3.2E-95 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VS_0148 6efdbe484dfe093b3046ad7b85358503 245 Gene3D G3DSA:2.60.300.12 53 151 3.6E-14 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_0148 6efdbe484dfe093b3046ad7b85358503 245 SUPERFAMILY SSF89360 54 150 1.55E-21 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_0148 6efdbe484dfe093b3046ad7b85358503 245 SUPERFAMILY SSF117916 148 237 1.5E-21 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VS_0148 6efdbe484dfe093b3046ad7b85358503 245 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 54 245 44.031 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 Gene3D G3DSA:3.90.190.20 317 457 1.0E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 33.016 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 SUPERFAMILY SSF53244 318 452 4.58E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 SUPERFAMILY SSF53623 104 315 1.31E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 Pfam PF08245 Mur ligase middle domain 109 297 4.2E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 SUPERFAMILY SSF63418 1 100 1.07E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 452 4.7E-141 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 Pfam PF01225 Mur ligase family, catalytic domain 28 79 2.0E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 Gene3D G3DSA:3.40.1390.10 1 84 3.1E-25 T 14-10-2018 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 398 1.9E-14 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VS_0446 6b7ab2c8d861bf6fd7d7e68fce580b60 457 Gene3D G3DSA:3.40.1190.10 85 315 1.2E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_II0524 6fb99dbfcdd2755a54fa369233c3ad10 112 Gene3D G3DSA:2.20.25.10 1 40 1.2E-17 T 14-10-2018 VS_II0524 6fb99dbfcdd2755a54fa369233c3ad10 112 Gene3D G3DSA:2.30.30.40 41 112 6.4E-24 T 14-10-2018 VS_II0524 6fb99dbfcdd2755a54fa369233c3ad10 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 2.2E-38 T 14-10-2018 IPR004624 PhnA protein VS_II0524 6fb99dbfcdd2755a54fa369233c3ad10 112 SUPERFAMILY SSF82057 39 111 7.78E-22 T 14-10-2018 VS_II0524 6fb99dbfcdd2755a54fa369233c3ad10 112 SUPERFAMILY SSF57783 1 35 1.36E-13 T 14-10-2018 VS_II0524 6fb99dbfcdd2755a54fa369233c3ad10 112 Pfam PF03831 PhnA domain 44 112 8.3E-24 T 14-10-2018 IPR013988 PhnA protein, C-terminal VS_II0524 6fb99dbfcdd2755a54fa369233c3ad10 112 Pfam PF08274 PhnA Zinc-Ribbon 2 30 1.2E-13 T 14-10-2018 IPR013987 PhnA protein, N-terminal VS_II1227 6bec7c3d54da151f78e8e3afb955a24f 221 Pfam PF13309 HTH domain 159 216 7.3E-13 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VS_II1227 6bec7c3d54da151f78e8e3afb955a24f 221 Pfam PF08348 YheO-like PAS domain 16 122 7.7E-35 T 14-10-2018 IPR013559 YheO-like VS_II1227 6bec7c3d54da151f78e8e3afb955a24f 221 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 12 134 5.0E-63 T 14-10-2018 IPR013559 YheO-like VS_2375 3ab7d67e873a41eb83cbc315abac2674 521 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 111 1.7E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2375 3ab7d67e873a41eb83cbc315abac2674 521 Gene3D G3DSA:1.10.10.10 6 113 1.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2375 3ab7d67e873a41eb83cbc315abac2674 521 SMART SM00862 33 111 2.0E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2375 3ab7d67e873a41eb83cbc315abac2674 521 SUPERFAMILY SSF46894 12 112 1.62E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_2820 d3a7eb40d3b245050727766e514be726 105 Pfam PF00467 KOW motif 8 37 2.0E-5 T 14-10-2018 IPR005824 KOW VS_2820 d3a7eb40d3b245050727766e514be726 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.692 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2820 d3a7eb40d3b245050727766e514be726 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 1.2E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2820 d3a7eb40d3b245050727766e514be726 105 SUPERFAMILY SSF50104 4 101 2.62E-33 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VS_2820 d3a7eb40d3b245050727766e514be726 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 3.1E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2820 d3a7eb40d3b245050727766e514be726 105 Gene3D G3DSA:2.30.30.30 2 104 6.6E-40 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VS_2820 d3a7eb40d3b245050727766e514be726 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2820 d3a7eb40d3b245050727766e514be726 105 SMART SM00739 4 31 1.8E-4 T 14-10-2018 IPR005824 KOW VS_0344 6f4d29172f9eee2609e8901aed25a942 210 SUPERFAMILY SSF52972 2 208 1.18E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_0344 6f4d29172f9eee2609e8901aed25a942 210 Gene3D G3DSA:3.90.950.10 4 210 2.2E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_0344 6f4d29172f9eee2609e8901aed25a942 210 PIRSF PIRSF006305 1 210 5.4E-54 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_0344 6f4d29172f9eee2609e8901aed25a942 210 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 207 5.3E-52 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_0344 6f4d29172f9eee2609e8901aed25a942 210 Pfam PF02545 Maf-like protein 5 208 4.9E-58 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_0344 6f4d29172f9eee2609e8901aed25a942 210 Hamap MF_00528 Septum formation protein Maf [maf]. 5 210 28.593 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VS_II1503 81a7e9cac098d5a7a1be2411fcc2e911 83 Pfam PF11391 Protein of unknown function (DUF2798) 12 69 6.4E-19 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 VS_0924 d03734a9eef58564517e887680c728a8 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 2.3E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_0924 d03734a9eef58564517e887680c728a8 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 2.3E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_0924 d03734a9eef58564517e887680c728a8 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 2.3E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_0924 d03734a9eef58564517e887680c728a8 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 2.3E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_0924 d03734a9eef58564517e887680c728a8 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 2.3E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_0924 d03734a9eef58564517e887680c728a8 525 Gene3D G3DSA:1.10.1200.140 388 445 9.4E-30 T 14-10-2018 VS_0924 d03734a9eef58564517e887680c728a8 525 Gene3D G3DSA:3.40.720.10 24 375 1.5E-145 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_0924 d03734a9eef58564517e887680c728a8 525 Gene3D G3DSA:3.40.720.10 462 525 4.6E-8 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_0924 d03734a9eef58564517e887680c728a8 525 SUPERFAMILY SSF53649 10 514 9.52E-117 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_0924 d03734a9eef58564517e887680c728a8 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_0924 d03734a9eef58564517e887680c728a8 525 Pfam PF00245 Alkaline phosphatase 26 503 1.5E-85 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_0924 d03734a9eef58564517e887680c728a8 525 SMART SM00098 27 437 1.2E-58 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 Pfam PF03466 LysR substrate binding domain 86 301 1.3E-10 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0164 e1f238162bcb9804dd37b5769530687d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 2.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 Gene3D G3DSA:3.40.190.10 93 165 6.5E-9 T 14-10-2018 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 Gene3D G3DSA:3.40.190.10 166 255 6.5E-9 T 14-10-2018 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 SUPERFAMILY SSF53850 86 299 3.08E-12 T 14-10-2018 VS_II0164 e1f238162bcb9804dd37b5769530687d 305 SUPERFAMILY SSF46785 4 101 2.73E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0164 e1f238162bcb9804dd37b5769530687d 305 Gene3D G3DSA:1.10.10.10 2 83 1.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2606 dde9780ba58207f963662b3287f24913 93 Gene3D G3DSA:1.20.5.400 22 63 3.0E-9 T 14-10-2018 VS_2606 dde9780ba58207f963662b3287f24913 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.82 T 14-10-2018 IPR023081 Cell division protein FtsB VS_2606 dde9780ba58207f963662b3287f24913 93 Pfam PF04977 Septum formation initiator 11 89 2.1E-27 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 Gene3D G3DSA:3.40.50.1980 233 348 1.0E-123 T 14-10-2018 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 Gene3D G3DSA:3.40.50.1980 32 231 1.0E-123 T 14-10-2018 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 Pfam PF00815 Histidinol dehydrogenase 28 426 2.9E-168 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 360 378 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 319 344 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 1.0E-100 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 426 41.402 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 425 2.5E-163 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 PIRSF PIRSF000099 1 429 1.2E-166 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VS_2025 dc1e1b69d2d13f5781143792890d2e0b 439 SUPERFAMILY SSF53720 5 430 6.67E-91 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PIRSF PIRSF036893 1 172 1.6E-46 T 14-10-2018 IPR022271 Lipocalin, ApoD type VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 Pfam PF08212 Lipocalin-like domain 30 169 6.6E-42 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR00179 Lipocalin signature 32 44 6.5E-7 T 14-10-2018 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR00179 Lipocalin signature 136 151 6.5E-7 T 14-10-2018 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR00179 Lipocalin signature 113 125 6.5E-7 T 14-10-2018 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR01171 Bacterial lipocalin signature 132 143 3.6E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR01171 Bacterial lipocalin signature 65 74 3.6E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR01171 Bacterial lipocalin signature 99 113 3.6E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR01171 Bacterial lipocalin signature 29 43 3.6E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR01171 Bacterial lipocalin signature 116 124 3.6E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR01171 Bacterial lipocalin signature 46 62 3.6E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 PRINTS PR01171 Bacterial lipocalin signature 159 169 3.6E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 Gene3D G3DSA:2.40.128.20 15 171 5.8E-53 T 14-10-2018 IPR012674 Calycin VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 ProSitePatterns PS00213 Lipocalin signature. 30 41 - T 14-10-2018 IPR022272 Lipocalin family conserved site VS_2109 92d1f2fd9cf8f908b6fa1e50eedac126 172 SUPERFAMILY SSF50814 4 171 9.04E-55 T 14-10-2018 IPR012674 Calycin VS_II0683 bc2fa5c6c3571a704ca2c9d4dcd73ceb 392 Gene3D G3DSA:1.25.40.10 28 167 7.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0683 bc2fa5c6c3571a704ca2c9d4dcd73ceb 392 Gene3D G3DSA:1.25.40.10 172 391 8.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0683 bc2fa5c6c3571a704ca2c9d4dcd73ceb 392 SUPERFAMILY SSF48452 265 373 5.38E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0683 bc2fa5c6c3571a704ca2c9d4dcd73ceb 392 SUPERFAMILY SSF48452 30 232 8.14E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 SUPERFAMILY SSF52425 2 194 2.75E-25 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 Pfam PF00875 DNA photolyase 6 170 7.8E-16 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 PRINTS PR00147 DNA photolyase signature 339 355 1.1E-9 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 PRINTS PR00147 DNA photolyase signature 359 377 1.1E-9 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 Gene3D G3DSA:1.10.579.10 321 463 7.3E-47 T 14-10-2018 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 3 455 2.5E-124 T 14-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 Gene3D G3DSA:1.25.40.80 142 310 2.1E-41 T 14-10-2018 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 SUPERFAMILY SSF48173 211 454 4.84E-63 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VS_1619 8402d6bbda80be9e115d89017503d4d0 470 Gene3D G3DSA:3.40.50.620 5 133 1.3E-16 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_1619 8402d6bbda80be9e115d89017503d4d0 470 Pfam PF03441 FAD binding domain of DNA photolyase 290 454 2.9E-39 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VS_1799 303e5e0669e21e3497079899ab5844a9 214 SUPERFAMILY SSF56925 31 214 7.85E-23 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_1799 303e5e0669e21e3497079899ab5844a9 214 Pfam PF13505 Outer membrane protein beta-barrel domain 16 195 1.9E-24 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VS_1799 303e5e0669e21e3497079899ab5844a9 214 Gene3D G3DSA:2.40.160.20 30 214 2.1E-24 T 14-10-2018 VS_2378 1bab772edef7bd10d7325c34fba930c4 481 Gene3D G3DSA:3.30.1360.60 8 85 2.6E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_2378 1bab772edef7bd10d7325c34fba930c4 481 SUPERFAMILY SSF55604 17 89 3.14E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_2378 1bab772edef7bd10d7325c34fba930c4 481 Pfam PF00367 phosphotransferase system, EIIB 18 50 4.3E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_2378 1bab772edef7bd10d7325c34fba930c4 481 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 28 45 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_2378 1bab772edef7bd10d7325c34fba930c4 481 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 13 468 9.3E-206 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 VS_2378 1bab772edef7bd10d7325c34fba930c4 481 Pfam PF02378 Phosphotransferase system, EIIC 119 411 7.1E-32 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_2378 1bab772edef7bd10d7325c34fba930c4 481 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 37 118 7.0E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 SUPERFAMILY SSF111369 63 155 1.15E-7 T 14-10-2018 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 SUPERFAMILY SSF111369 196 277 2.09E-7 T 14-10-2018 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 Gene3D G3DSA:2.40.50.100 249 281 2.5E-17 T 14-10-2018 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 Gene3D G3DSA:1.10.287.470 162 248 2.5E-17 T 14-10-2018 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 Gene3D G3DSA:2.40.50.100 71 99 3.6E-9 T 14-10-2018 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 Gene3D G3DSA:1.10.287.470 100 155 3.6E-9 T 14-10-2018 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 Gene3D G3DSA:2.40.30.170 282 332 2.5E-17 T 14-10-2018 VS_II0332 eaa34f9f4379e2988736ae7bd56ad351 407 Pfam PF13533 Biotin-lipoyl like 72 109 7.9E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_2508 e39a3dc89cf30a81994e9bb2d8610823 341 SUPERFAMILY SSF161098 96 287 4.84E-19 T 14-10-2018 IPR035906 MetI-like superfamily VS_2508 e39a3dc89cf30a81994e9bb2d8610823 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 306 8.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2508 e39a3dc89cf30a81994e9bb2d8610823 341 Gene3D G3DSA:1.10.3720.10 94 303 2.3E-15 T 14-10-2018 IPR035906 MetI-like superfamily VS_2508 e39a3dc89cf30a81994e9bb2d8610823 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 38 1.8E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VS_0237 7c4acd0879fba9e8789c157adb237a4e 374 SUPERFAMILY SSF160355 61 337 5.49E-61 T 14-10-2018 VS_0237 7c4acd0879fba9e8789c157adb237a4e 374 Gene3D G3DSA:3.30.1890.10 51 223 3.2E-30 T 14-10-2018 VS_0237 7c4acd0879fba9e8789c157adb237a4e 374 Gene3D G3DSA:1.10.287.210 224 323 1.6E-22 T 14-10-2018 VS_0237 7c4acd0879fba9e8789c157adb237a4e 374 Pfam PF02706 Chain length determinant protein 22 93 7.8E-14 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VS_0237 7c4acd0879fba9e8789c157adb237a4e 374 Pfam PF13807 G-rich domain on putative tyrosine kinase 328 367 2.0E-7 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VS_0800 d70a1aaa3f397d28e825b019beb10717 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.5E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.5E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.5E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.5E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.5E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.5E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 Gene3D G3DSA:3.40.50.150 75 274 3.4E-60 T 14-10-2018 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 SMART SM00138 8 272 4.5E-133 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 6.8E-68 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VS_0800 d70a1aaa3f397d28e825b019beb10717 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 1.3E-9 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VS_0800 d70a1aaa3f397d28e825b019beb10717 275 SUPERFAMILY SSF47757 3 75 9.81E-15 T 14-10-2018 VS_0800 d70a1aaa3f397d28e825b019beb10717 275 Gene3D G3DSA:1.10.155.10 1 74 2.1E-10 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VS_0800 d70a1aaa3f397d28e825b019beb10717 275 SUPERFAMILY SSF53335 76 269 2.23E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1021 f73158abdf99003ae6f2abd99281a10a 341 SUPERFAMILY SSF53659 4 336 1.44E-102 T 14-10-2018 VS_1021 f73158abdf99003ae6f2abd99281a10a 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 136.016 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VS_1021 f73158abdf99003ae6f2abd99281a10a 341 Gene3D G3DSA:3.40.718.10 2 340 3.7E-119 T 14-10-2018 VS_1021 f73158abdf99003ae6f2abd99281a10a 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 1.3E-107 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VS_1021 f73158abdf99003ae6f2abd99281a10a 341 PIRSF PIRSF002465 2 339 1.7E-124 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VS_1021 f73158abdf99003ae6f2abd99281a10a 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.1E-100 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 Gene3D G3DSA:3.40.50.300 132 313 4.6E-63 T 14-10-2018 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 Gene3D G3DSA:3.40.50.2300 1 131 8.5E-28 T 14-10-2018 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 Pfam PF00158 Sigma-54 interaction domain 143 309 6.3E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 SUPERFAMILY SSF52172 3 186 4.84E-35 T 14-10-2018 IPR011006 CheY-like superfamily VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 SUPERFAMILY SSF46689 443 494 3.27E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 SMART SM00382 162 304 1.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 SUPERFAMILY SSF52540 142 385 1.9E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 SMART SM00448 3 114 3.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 Gene3D G3DSA:1.10.10.60 448 491 2.8E-9 T 14-10-2018 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 Pfam PF02954 Bacterial regulatory protein, Fis family 454 490 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 Gene3D G3DSA:1.10.8.60 314 393 1.4E-24 T 14-10-2018 VS_1527 24239e55a8f8cb6562b9af2df5c6fc8e 503 Pfam PF00072 Response regulator receiver domain 5 114 5.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 7.5E-134 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Gene3D G3DSA:3.40.50.300 13 177 1.1E-101 T 14-10-2018 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 363 6.1E-35 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.9E-44 T 14-10-2018 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Gene3D G3DSA:1.20.272.10 242 361 3.7E-40 T 14-10-2018 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 533 609 2.7E-20 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Gene3D G3DSA:3.30.300.150 609 734 1.3E-39 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 611 749 6.6E-48 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 SUPERFAMILY SSF48019 243 361 8.42E-34 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 SMART SM00382 37 179 9.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0915 aae90b6a50b0828c15e79839c2493d02 752 Gene3D G3DSA:1.10.8.60 8 240 1.1E-101 T 14-10-2018 VS_0915 aae90b6a50b0828c15e79839c2493d02 752 SUPERFAMILY SSF52540 33 223 2.18E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 389 551 1.2E-36 T 14-10-2018 IPR000160 GGDEF domain VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 Gene3D G3DSA:3.30.70.270 387 565 9.4E-48 T 14-10-2018 VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 SUPERFAMILY SSF141868 569 813 3.53E-80 T 14-10-2018 IPR035919 EAL domain superfamily VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 Gene3D G3DSA:3.30.450.20 55 222 2.5E-31 T 14-10-2018 VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 Pfam PF00563 EAL domain 571 805 5.5E-64 T 14-10-2018 IPR001633 EAL domain VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 Gene3D G3DSA:3.20.20.450 566 819 1.2E-83 T 14-10-2018 IPR035919 EAL domain superfamily VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 SMART SM00267 382 554 4.4E-46 T 14-10-2018 IPR000160 GGDEF domain VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 SUPERFAMILY SSF55073 398 555 3.37E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 Pfam PF08269 Cache domain 34 319 6.5E-61 T 14-10-2018 IPR004010 Double Cache domain 2 VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 Gene3D G3DSA:3.30.450.20 223 326 7.2E-7 T 14-10-2018 VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 548 2.9E-40 T 14-10-2018 IPR000160 GGDEF domain VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 SMART SM00052 564 810 1.6E-91 T 14-10-2018 IPR001633 EAL domain VS_2863 aa5dd6fd0cce77425daf6b1cb3c786ae 828 SMART SM01049 71 164 2.0E-9 T 14-10-2018 IPR033480 Single Cache domain 2 VS_0760 696293efafb9146f1b4c84e612115f25 193 Gene3D G3DSA:3.30.1370.110 45 181 2.5E-42 T 14-10-2018 VS_0760 696293efafb9146f1b4c84e612115f25 193 SMART SM00463 92 175 1.4E-13 T 14-10-2018 IPR002625 Smr domain VS_0760 696293efafb9146f1b4c84e612115f25 193 SUPERFAMILY SSF160443 93 175 2.09E-14 T 14-10-2018 IPR036063 Smr domain superfamily VS_0760 696293efafb9146f1b4c84e612115f25 193 Pfam PF01713 Smr domain 95 175 8.1E-21 T 14-10-2018 IPR002625 Smr domain VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 2.8E-55 T 14-10-2018 VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 Gene3D G3DSA:3.40.50.720 1 245 3.8E-72 T 14-10-2018 VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 SUPERFAMILY SSF51735 3 245 1.63E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 0.0087 T 14-10-2018 VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.1E-114 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0584 8951f066d1b1a02472fbbfbe76a76fd3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 820 5.7E-299 T 14-10-2018 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 PIRSF PIRSF000980 1 1157 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1116 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 SUPERFAMILY SSF52540 2 357 1.73E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 Gene3D G3DSA:1.10.10.160 79 192 2.0E-124 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 Gene3D G3DSA:1.10.486.10 463 675 2.5E-193 T 14-10-2018 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 SUPERFAMILY SSF52540 377 826 5.31E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 Gene3D G3DSA:3.40.50.10930 4 327 2.0E-124 T 14-10-2018 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1150 20.685 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 Gene3D G3DSA:1.10.10.990 883 958 3.2E-19 T 14-10-2018 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 SUPERFAMILY SSF52980 843 1143 3.22E-75 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VS_0673 2eade6c74aa124c906ea4436d55134f9 1158 Gene3D G3DSA:3.40.50.300 345 822 2.5E-193 T 14-10-2018 VS_1263 7e921bcd7ed45bf9b0b2e2b514a2d52e 294 Pfam PF03466 LysR substrate binding domain 93 289 3.5E-11 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1263 7e921bcd7ed45bf9b0b2e2b514a2d52e 294 Gene3D G3DSA:1.10.10.10 3 86 1.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1263 7e921bcd7ed45bf9b0b2e2b514a2d52e 294 Gene3D G3DSA:3.40.190.10 87 284 1.3E-14 T 14-10-2018 VS_1263 7e921bcd7ed45bf9b0b2e2b514a2d52e 294 SUPERFAMILY SSF46785 5 84 6.44E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1263 7e921bcd7ed45bf9b0b2e2b514a2d52e 294 Gene3D G3DSA:3.40.190.10 168 259 1.3E-14 T 14-10-2018 VS_1263 7e921bcd7ed45bf9b0b2e2b514a2d52e 294 SUPERFAMILY SSF53850 87 287 3.98E-19 T 14-10-2018 VS_1357 637c9f51e751e784005c6acbc5919103 101 SMART SM00530 10 69 5.6E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_1357 637c9f51e751e784005c6acbc5919103 101 Pfam PF12844 Helix-turn-helix domain 9 70 1.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_1357 637c9f51e751e784005c6acbc5919103 101 Gene3D G3DSA:1.10.260.40 7 101 2.4E-24 T 14-10-2018 VS_1357 637c9f51e751e784005c6acbc5919103 101 SUPERFAMILY SSF47413 4 75 5.09E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_2233 358ecd80b0b0d81d65cf32089f41b998 757 SUPERFAMILY SSF52540 4 182 2.59E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2233 358ecd80b0b0d81d65cf32089f41b998 757 Gene3D G3DSA:3.40.50.300 2 168 1.2E-41 T 14-10-2018 VS_2233 358ecd80b0b0d81d65cf32089f41b998 757 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.8E-17 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VS_2233 358ecd80b0b0d81d65cf32089f41b998 757 Pfam PF02421 Ferrous iron transport protein B 4 159 1.4E-56 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VS_2233 358ecd80b0b0d81d65cf32089f41b998 757 Pfam PF07670 Nucleoside recognition 349 440 6.2E-14 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_2233 358ecd80b0b0d81d65cf32089f41b998 757 Pfam PF07670 Nucleoside recognition 509 690 1.0E-35 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_2233 358ecd80b0b0d81d65cf32089f41b998 757 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 8.9E-173 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VS_II1420 db09d13592bcf499d63f1438f65799c1 279 SMART SM00342 192 274 1.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1420 db09d13592bcf499d63f1438f65799c1 279 SUPERFAMILY SSF46689 175 226 2.42E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1420 db09d13592bcf499d63f1438f65799c1 279 Pfam PF12852 Cupin 2 160 5.1E-22 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain VS_II1420 db09d13592bcf499d63f1438f65799c1 279 Gene3D G3DSA:1.10.10.60 235 279 9.3E-11 T 14-10-2018 VS_II1420 db09d13592bcf499d63f1438f65799c1 279 SUPERFAMILY SSF46689 228 276 5.82E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1420 db09d13592bcf499d63f1438f65799c1 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 270 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II1420 db09d13592bcf499d63f1438f65799c1 279 Gene3D G3DSA:1.10.10.60 176 234 1.7E-10 T 14-10-2018 VS_II1420 db09d13592bcf499d63f1438f65799c1 279 Pfam PF12833 Helix-turn-helix domain 199 275 2.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0773 67548d8b232d9e7d2b3b444cf0987a6c 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 418 4.3E-133 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VS_II0773 67548d8b232d9e7d2b3b444cf0987a6c 419 Gene3D G3DSA:2.40.160.60 22 419 4.6E-129 T 14-10-2018 VS_II0773 67548d8b232d9e7d2b3b444cf0987a6c 419 SUPERFAMILY SSF56935 22 419 1.37E-95 T 14-10-2018 VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 Gene3D G3DSA:3.40.190.290 129 274 3.0E-6 T 14-10-2018 VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 Gene3D G3DSA:1.10.10.10 1 84 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 Pfam PF03466 LysR substrate binding domain 125 264 3.6E-10 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 SUPERFAMILY SSF46785 2 80 2.56E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1433 4579d17c47707c5f5e66f22e52b2c481 297 SUPERFAMILY SSF53850 92 273 5.07E-16 T 14-10-2018 VS_1459 b133b318313ef10917c664b9f23e99c5 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 7.3E-115 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1459 b133b318313ef10917c664b9f23e99c5 477 SUPERFAMILY SSF81442 13 467 3.14E-122 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1459 b133b318313ef10917c664b9f23e99c5 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1459 b133b318313ef10917c664b9f23e99c5 477 Gene3D G3DSA:1.20.210.10 6 474 6.1E-206 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1459 b133b318313ef10917c664b9f23e99c5 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 3.0E-229 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VS_II0942 c63101ca8b902d0a72503ce578415a63 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 322 3.3E-52 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VS_1182 b971205afc25a5fb3711ae93665b8a24 170 SUPERFAMILY SSF54427 48 162 4.18E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily VS_1182 b971205afc25a5fb3711ae93665b8a24 170 Gene3D G3DSA:3.10.450.50 52 167 2.3E-15 T 14-10-2018 VS_1182 b971205afc25a5fb3711ae93665b8a24 170 Pfam PF12680 SnoaL-like domain 62 138 2.0E-8 T 14-10-2018 IPR037401 SnoaL-like domain VS_2853 c0cc4efd7d6869e5e9a60b9eecff122b 70 SUPERFAMILY SSF118001 1 67 3.4E-27 T 14-10-2018 IPR036685 YehU-like superfamily VS_2853 c0cc4efd7d6869e5e9a60b9eecff122b 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 65 6.3E-33 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VS_2853 c0cc4efd7d6869e5e9a60b9eecff122b 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 23.677 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VS_2853 c0cc4efd7d6869e5e9a60b9eecff122b 70 Gene3D G3DSA:1.10.10.610 1 70 4.1E-29 T 14-10-2018 IPR036685 YehU-like superfamily VS_2853 c0cc4efd7d6869e5e9a60b9eecff122b 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 1.0E-22 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VS_2853 c0cc4efd7d6869e5e9a60b9eecff122b 70 PIRSF PIRSF006169 1 70 4.1E-34 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VS_1687 33f150d3aedc00608f2daa54c78a3ee4 169 Pfam PF00583 Acetyltransferase (GNAT) family 40 143 2.3E-15 T 14-10-2018 IPR000182 GNAT domain VS_1687 33f150d3aedc00608f2daa54c78a3ee4 169 SUPERFAMILY SSF55729 8 168 8.75E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1687 33f150d3aedc00608f2daa54c78a3ee4 169 Gene3D G3DSA:3.40.630.30 8 169 6.0E-34 T 14-10-2018 VS_0882 4db28d31ace839c4e349eb7d4186c19a 270 Gene3D G3DSA:3.40.50.300 1 260 2.7E-72 T 14-10-2018 VS_0882 4db28d31ace839c4e349eb7d4186c19a 270 Pfam PF13614 AAA domain 3 165 1.7E-19 T 14-10-2018 IPR025669 AAA domain VS_0882 4db28d31ace839c4e349eb7d4186c19a 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-108 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 VS_0882 4db28d31ace839c4e349eb7d4186c19a 270 SUPERFAMILY SSF52540 1 268 1.75E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0882 4db28d31ace839c4e349eb7d4186c19a 270 PIRSF PIRSF003092 1 270 1.6E-94 T 14-10-2018 IPR025501 ATP binding protein MinD VS_II1171 ef82db29ebe7a9f3361a53c493c770f4 277 Gene3D G3DSA:1.10.10.10 72 114 9.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1171 ef82db29ebe7a9f3361a53c493c770f4 277 Pfam PF02631 RecX family 192 274 9.3E-11 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VS_II1171 ef82db29ebe7a9f3361a53c493c770f4 277 Pfam PF02631 RecX family 49 164 8.8E-18 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VS_II1374 ef68c202bc859880d3d0ff99208e0cda 248 SUPERFAMILY SSF141371 23 136 1.59E-33 T 14-10-2018 VS_II1374 ef68c202bc859880d3d0ff99208e0cda 248 Gene3D G3DSA:2.30.110.10 22 135 5.8E-43 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VS_II1374 ef68c202bc859880d3d0ff99208e0cda 248 Gene3D G3DSA:2.40.10.220 136 248 1.5E-37 T 14-10-2018 VS_II1374 ef68c202bc859880d3d0ff99208e0cda 248 Pfam PF07238 PilZ domain 133 234 6.0E-11 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VS_II1374 ef68c202bc859880d3d0ff99208e0cda 248 Pfam PF12945 Flagellar protein YcgR 37 126 3.2E-17 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VS_II1374 ef68c202bc859880d3d0ff99208e0cda 248 SUPERFAMILY SSF141371 137 246 5.3E-31 T 14-10-2018 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Gene3D G3DSA:3.30.565.10 306 471 3.6E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 307 1.0E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Gene3D G3DSA:1.10.287.130 207 305 7.2E-30 T 14-10-2018 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Gene3D G3DSA:3.40.50.2300 731 805 5.1E-20 T 14-10-2018 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Pfam PF00072 Response regulator receiver domain 488 601 3.7E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Pfam PF00072 Response regulator receiver domain 676 789 2.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SUPERFAMILY SSF55874 296 467 3.93E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SMART SM00387 354 472 1.3E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 39 141 3.5E-10 T 14-10-2018 IPR033414 Periplasmic sensor domain VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Gene3D G3DSA:3.40.50.2300 481 621 5.1E-24 T 14-10-2018 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SMART SM00388 242 307 4.0E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Gene3D G3DSA:3.40.50.12330 669 730 1.4E-19 T 14-10-2018 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SUPERFAMILY SSF52172 484 612 2.28E-24 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SUPERFAMILY SSF47384 226 308 1.22E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SUPERFAMILY SSF52172 675 793 1.18E-33 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 471 5.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SMART SM00448 674 789 4.5E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1524 9c58aaef8c8cef8ffb55366a856b50b9 808 SMART SM00448 486 604 1.4E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2894 1f980b89d75753f790cee1e33412aed7 405 Gene3D G3DSA:3.40.640.10 15 260 1.6E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2894 1f980b89d75753f790cee1e33412aed7 405 SUPERFAMILY SSF53383 21 395 2.53E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2894 1f980b89d75753f790cee1e33412aed7 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 16 395 3.6E-195 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 VS_2894 1f980b89d75753f790cee1e33412aed7 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 394 3.7E-131 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_2894 1f980b89d75753f790cee1e33412aed7 405 Gene3D G3DSA:3.90.1150.10 261 398 4.3E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2894 1f980b89d75753f790cee1e33412aed7 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_2894 1f980b89d75753f790cee1e33412aed7 405 PIRSF PIRSF001434 5 397 1.2E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_1395 0061272992bf99f1d3a855ddcd8e839b 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 167 376 9.5E-28 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VS_1395 0061272992bf99f1d3a855ddcd8e839b 397 SMART SM00359 3 87 4.2E-15 T 14-10-2018 IPR002478 PUA domain GO:0003723 VS_1395 0061272992bf99f1d3a855ddcd8e839b 397 Gene3D G3DSA:3.40.50.150 181 396 1.9E-65 T 14-10-2018 VS_1395 0061272992bf99f1d3a855ddcd8e839b 397 SUPERFAMILY SSF88697 3 73 7.81E-18 T 14-10-2018 IPR015947 PUA-like superfamily VS_1395 0061272992bf99f1d3a855ddcd8e839b 397 Gene3D G3DSA:2.30.130.10 2 72 1.7E-28 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VS_1395 0061272992bf99f1d3a855ddcd8e839b 397 SUPERFAMILY SSF53335 78 393 7.7E-67 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1395 0061272992bf99f1d3a855ddcd8e839b 397 Gene3D G3DSA:3.30.750.80 73 180 2.9E-35 T 14-10-2018 VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 Gene3D G3DSA:1.10.10.10 2 139 1.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 Gene3D G3DSA:3.40.630.30 142 286 1.1E-26 T 14-10-2018 VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 SUPERFAMILY SSF46785 5 136 2.33E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 Pfam PF12802 MarR family 28 85 1.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 SMART SM00347 22 121 1.9E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 Pfam PF00583 Acetyltransferase (GNAT) family 187 278 5.6E-16 T 14-10-2018 IPR000182 GNAT domain VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VS_2735 6d111ba6af50e0fe5bfff7e8a9ce06e2 301 SUPERFAMILY SSF55729 143 301 5.4E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 SMART SM00091 14 82 2.0E-7 T 14-10-2018 IPR000014 PAS domain VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 Gene3D G3DSA:3.30.450.20 9 122 1.3E-27 T 14-10-2018 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 244 357 4.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 SMART SM00387 243 358 9.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 Pfam PF00989 PAS fold 18 119 1.2E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 200 6.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 SUPERFAMILY SSF55874 208 357 5.5E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 Gene3D G3DSA:3.30.565.10 202 358 1.6E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 SUPERFAMILY SSF55785 13 112 7.33E-9 T 14-10-2018 IPR035965 PAS domain superfamily VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 SUPERFAMILY SSF47384 135 200 6.67E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 Gene3D G3DSA:1.10.287.130 124 201 2.2E-13 T 14-10-2018 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 SMART SM00388 139 204 3.2E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 306 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0119 a120a39b51a0f4385c9b071e04d00e12 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 357 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1084 ea7c8c7da51dbb0b6d0ca6e870713bca 265 PRINTS PR00412 Epoxide hydrolase signature 205 221 3.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_1084 ea7c8c7da51dbb0b6d0ca6e870713bca 265 PRINTS PR00412 Epoxide hydrolase signature 24 42 3.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_1084 ea7c8c7da51dbb0b6d0ca6e870713bca 265 PRINTS PR00412 Epoxide hydrolase signature 237 259 3.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_1084 ea7c8c7da51dbb0b6d0ca6e870713bca 265 Gene3D G3DSA:3.40.50.1820 7 263 9.4E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1084 ea7c8c7da51dbb0b6d0ca6e870713bca 265 Pfam PF00561 alpha/beta hydrolase fold 19 121 2.8E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_1084 ea7c8c7da51dbb0b6d0ca6e870713bca 265 SUPERFAMILY SSF53474 14 262 2.63E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2217 48d7c37d149e330038964973a4cd4187 1980 Gene3D G3DSA:3.40.47.10 18 491 3.9E-118 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_2217 48d7c37d149e330038964973a4cd4187 1980 SUPERFAMILY SSF53901 17 418 1.38E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_2217 48d7c37d149e330038964973a4cd4187 1980 SUPERFAMILY SSF54637 1339 1521 2.61E-29 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2217 48d7c37d149e330038964973a4cd4187 1980 Gene3D G3DSA:3.10.129.10 1128 1307 1.4E-29 T 14-10-2018 VS_2217 48d7c37d149e330038964973a4cd4187 1980 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 302 419 1.5E-34 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VS_2217 48d7c37d149e330038964973a4cd4187 1980 Gene3D G3DSA:3.10.129.10 1813 1980 1.3E-43 T 14-10-2018 VS_2217 48d7c37d149e330038964973a4cd4187 1980 Gene3D G3DSA:3.10.129.10 1337 1523 1.5E-47 T 14-10-2018 VS_2217 48d7c37d149e330038964973a4cd4187 1980 SUPERFAMILY SSF53901 750 867 3.39E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_2217 48d7c37d149e330038964973a4cd4187 1980 SUPERFAMILY SSF53901 495 766 2.25E-25 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_2217 48d7c37d149e330038964973a4cd4187 1980 SUPERFAMILY SSF54637 1831 1978 1.62E-28 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2217 48d7c37d149e330038964973a4cd4187 1980 Pfam PF07977 FabA-like domain 1376 1510 6.9E-39 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_2217 48d7c37d149e330038964973a4cd4187 1980 Pfam PF07977 FabA-like domain 1837 1971 3.3E-39 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_2217 48d7c37d149e330038964973a4cd4187 1980 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 19 294 2.9E-40 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_2217 48d7c37d149e330038964973a4cd4187 1980 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 495 765 2.5E-23 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_2217 48d7c37d149e330038964973a4cd4187 1980 Gene3D G3DSA:3.10.129.10 1598 1775 9.0E-26 T 14-10-2018 VS_2217 48d7c37d149e330038964973a4cd4187 1980 SUPERFAMILY SSF54637 1128 1306 3.23E-23 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2217 48d7c37d149e330038964973a4cd4187 1980 SUPERFAMILY SSF54637 1597 1779 4.72E-24 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2217 48d7c37d149e330038964973a4cd4187 1980 SMART SM00825 Beta-ketoacyl synthase 21 474 4.5E-51 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VS_II0239 8c1b385c4686379a3ac67ff9680b54b9 363 Pfam PF01699 Sodium/calcium exchanger protein 222 361 3.4E-8 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VS_II0239 8c1b385c4686379a3ac67ff9680b54b9 363 Pfam PF01699 Sodium/calcium exchanger protein 39 192 2.0E-16 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VS_2609 29ae052e83953d31d5244909822686de 546 Gene3D G3DSA:3.40.50.300 1 285 1.0E-132 T 14-10-2018 VS_2609 29ae052e83953d31d5244909822686de 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.6E-258 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VS_2609 29ae052e83953d31d5244909822686de 546 SUPERFAMILY SSF52317 289 539 1.33E-87 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_2609 29ae052e83953d31d5244909822686de 546 SUPERFAMILY SSF52540 3 269 1.01E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2609 29ae052e83953d31d5244909822686de 546 Pfam PF06418 CTP synthase N-terminus 5 265 2.1E-124 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VS_2609 29ae052e83953d31d5244909822686de 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 8.3E-63 T 14-10-2018 IPR017926 Glutamine amidotransferase VS_2609 29ae052e83953d31d5244909822686de 546 Gene3D G3DSA:3.40.50.880 286 543 9.5E-104 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_2609 29ae052e83953d31d5244909822686de 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.963 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VS_II1422 e445190ca33f1a8a9b95a2141c610f26 211 PIRSF PIRSF039033 2 210 8.2E-55 T 14-10-2018 IPR028347 START domain-containing protein VS_II1422 e445190ca33f1a8a9b95a2141c610f26 211 Pfam PF01852 START domain 63 198 7.2E-8 T 14-10-2018 IPR002913 START domain GO:0008289 VS_II1422 e445190ca33f1a8a9b95a2141c610f26 211 Gene3D G3DSA:3.30.530.20 21 205 6.4E-52 T 14-10-2018 IPR023393 START-like domain superfamily VS_II1422 e445190ca33f1a8a9b95a2141c610f26 211 SUPERFAMILY SSF55961 19 197 3.8E-39 T 14-10-2018 VS_II0192 781c1dba97d06fd4107f26320c7f3eef 304 SUPERFAMILY SSF103481 224 302 2.75E-8 T 14-10-2018 VS_II0192 781c1dba97d06fd4107f26320c7f3eef 304 SUPERFAMILY SSF103481 46 143 1.24E-8 T 14-10-2018 VS_II0192 781c1dba97d06fd4107f26320c7f3eef 304 Pfam PF00892 EamA-like transporter family 5 139 1.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0192 781c1dba97d06fd4107f26320c7f3eef 304 Pfam PF00892 EamA-like transporter family 160 302 5.4E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_2076 e30f5667cc83dd7b685fe5483a0a6555 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 5.6E-72 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB VS_2076 e30f5667cc83dd7b685fe5483a0a6555 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 3.7E-54 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB VS_2076 e30f5667cc83dd7b685fe5483a0a6555 196 Gene3D G3DSA:3.40.50.10610 39 188 4.6E-43 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 4.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 4.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:3.30.70.1440 667 860 1.4E-221 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:1.20.1640.10 508 1017 1.4E-221 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 SUPERFAMILY SSF82866 297 489 2.22E-38 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Pfam PF00873 AcrB/AcrD/AcrF family 12 1019 1.2E-149 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:3.30.2090.10 715 806 1.4E-221 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 SUPERFAMILY SSF82714 184 266 4.19E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 SUPERFAMILY SSF82693 42 127 7.32E-18 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:3.30.70.1320 133 326 1.4E-221 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 SUPERFAMILY SSF82693 147 325 3.4E-8 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:1.20.1640.10 12 507 1.4E-221 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 SUPERFAMILY SSF82693 561 658 8.11E-6 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:3.30.70.1430 564 666 1.4E-221 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 SUPERFAMILY SSF82714 714 801 1.18E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:3.30.2090.10 180 273 1.4E-221 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 Gene3D G3DSA:3.30.70.1430 39 814 1.4E-221 T 14-10-2018 VS_2103 4c6a8527034a898e7f6c2315ca0e4181 1032 SUPERFAMILY SSF82866 801 1024 5.36E-39 T 14-10-2018 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 Gene3D G3DSA:1.10.490.80 601 698 8.8E-15 T 14-10-2018 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 Pfam PF00771 FHIPEP family 32 690 1.9E-268 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 697 1.8E-264 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 Gene3D G3DSA:1.10.8.540 510 597 1.6E-22 T 14-10-2018 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 Gene3D G3DSA:3.40.30.60 366 509 2.4E-53 T 14-10-2018 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 PIRSF PIRSF005419 11 700 1.5E-250 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.6E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.6E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.6E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.6E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.6E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.6E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VS_0837 bf24df8f1928849d9194cbdc22fd8e02 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 14-10-2018 IPR025505 FHIPEP conserved site VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82693 673 857 1.31E-24 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:3.30.2090.10 721 809 6.0E-281 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:3.30.70.1320 134 333 6.0E-281 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:3.30.70.1430 39 817 6.0E-281 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82693 563 671 4.08E-20 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82693 39 130 7.85E-22 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:1.20.1640.10 511 1024 6.0E-281 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Pfam PF00873 AcrB/AcrD/AcrF family 2 1027 1.1E-297 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:3.30.70.1430 565 668 6.0E-281 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82693 136 331 1.06E-18 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1037 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:3.30.2090.10 180 276 6.0E-281 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82866 831 1027 2.62E-37 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82714 184 273 3.66E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 6.8E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:3.30.70.1440 669 866 6.0E-281 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82866 298 499 2.62E-46 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 Gene3D G3DSA:1.20.1640.10 9 510 6.0E-281 T 14-10-2018 VS_II0918 4c70e11501f98d337b4498e597b6d013 1039 SUPERFAMILY SSF82714 722 807 4.05E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 6.0E-13 T 14-10-2018 IPR001451 Hexapeptide repeat VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.9E-16 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 343 6.1E-180 T 14-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 Gene3D G3DSA:3.30.70.2010 1 130 1.4E-38 T 14-10-2018 VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 Gene3D G3DSA:2.160.10.10 172 343 1.9E-70 T 14-10-2018 VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 Gene3D G3DSA:3.30.60.70 131 171 1.0E-20 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.129 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VS_0666 116d0e79b5c2e70f584b57aa7edb1f94 343 SUPERFAMILY SSF51161 90 324 1.66E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_2464 0c7c09b58cb14df0acf7220a96d871dd 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 417 3.9E-72 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VS_2464 0c7c09b58cb14df0acf7220a96d871dd 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.7E-25 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VS_2464 0c7c09b58cb14df0acf7220a96d871dd 420 Pfam PF07670 Nucleoside recognition 95 191 4.0E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_2464 0c7c09b58cb14df0acf7220a96d871dd 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 417 2.7E-148 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VS_2648 6921d064ead777c2ef805467cb28c110 353 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 7 341 6.0E-189 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VS_2648 6921d064ead777c2ef805467cb28c110 353 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 7 116 1.0E-29 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 Gene3D G3DSA:3.30.360.10 167 331 5.9E-126 T 14-10-2018 VS_2648 6921d064ead777c2ef805467cb28c110 353 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 173 329 5.1E-55 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 SUPERFAMILY SSF51735 6 192 1.14E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2648 6921d064ead777c2ef805467cb28c110 353 PIRSF PIRSF000149 4 350 1.6E-123 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 SMART SM00846 6 168 3.1E-67 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 5 350 65.181 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VS_2648 6921d064ead777c2ef805467cb28c110 353 Gene3D G3DSA:3.40.50.720 7 341 5.9E-126 T 14-10-2018 VS_2648 6921d064ead777c2ef805467cb28c110 353 SUPERFAMILY SSF55347 168 330 1.99E-58 T 14-10-2018 VS_2648 6921d064ead777c2ef805467cb28c110 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 125 138 2.2E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 245 262 2.2E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 162 180 2.2E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 189 205 2.2E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2648 6921d064ead777c2ef805467cb28c110 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 285 300 2.2E-29 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 7.2E-69 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 SUPERFAMILY SSF53223 1 122 5.56E-40 T 14-10-2018 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.999 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 Gene3D G3DSA:3.40.50.720 6 259 1.1E-108 T 14-10-2018 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.9E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.9E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.9E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.9E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.9E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.9E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.9E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 SUPERFAMILY SSF51735 123 280 2.11E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0889 d66f0e22a305260ee20e693f7f09d256 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 2.0E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VS_0889 d66f0e22a305260ee20e693f7f09d256 285 Gene3D G3DSA:3.40.50.10860 8 276 1.1E-108 T 14-10-2018 VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 1.7E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 SUPERFAMILY SSF51735 103 299 3.13E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 SUPERFAMILY SSF52283 1 136 1.59E-40 T 14-10-2018 VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 Gene3D G3DSA:3.40.50.720 103 298 4.3E-131 T 14-10-2018 VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 5.5E-31 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 Gene3D G3DSA:3.40.50.720 4 318 4.3E-131 T 14-10-2018 VS_II0150 c42a74cab1503c8394872ffe4db1a0a3 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VS_3007 2ab71834e18c261084f1111a2e35ee8d 126 Gene3D G3DSA:1.10.3830.10 9 126 3.9E-40 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VS_3007 2ab71834e18c261084f1111a2e35ee8d 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 24 124 6.7E-36 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VS_3007 2ab71834e18c261084f1111a2e35ee8d 126 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 77 88 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VS_II0884 86d29100f396eeb317c55d4fcf1c83b3 155 SUPERFAMILY SSF55729 3 152 7.25E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0884 86d29100f396eeb317c55d4fcf1c83b3 155 Pfam PF13673 Acetyltransferase (GNAT) domain 28 150 2.2E-20 T 14-10-2018 IPR000182 GNAT domain VS_II0884 86d29100f396eeb317c55d4fcf1c83b3 155 Gene3D G3DSA:3.40.630.30 1 155 2.8E-43 T 14-10-2018 VS_0203 b4bfd2190cc181f9ff0b619e1bca4a7e 391 Gene3D G3DSA:2.70.70.10 252 390 1.6E-34 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_0203 b4bfd2190cc181f9ff0b619e1bca4a7e 391 SUPERFAMILY SSF51261 189 389 6.28E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_0203 b4bfd2190cc181f9ff0b619e1bca4a7e 391 Pfam PF01551 Peptidase family M23 292 385 1.6E-25 T 14-10-2018 IPR016047 Peptidase M23 VS_II0066 d2a4506e02344a6ff0ad1c9bf3d04b85 177 SUPERFAMILY SSF55729 17 142 5.67E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0066 d2a4506e02344a6ff0ad1c9bf3d04b85 177 Gene3D G3DSA:3.40.630.30 20 176 3.6E-41 T 14-10-2018 VS_II0066 d2a4506e02344a6ff0ad1c9bf3d04b85 177 Pfam PF00583 Acetyltransferase (GNAT) family 35 142 6.4E-13 T 14-10-2018 IPR000182 GNAT domain VS_II0066 d2a4506e02344a6ff0ad1c9bf3d04b85 177 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 23 174 1.5E-61 T 14-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 VS_1609 414e2b998fd29879d233be86fcd54e6d 334 Gene3D G3DSA:3.40.50.720 22 330 4.5E-112 T 14-10-2018 VS_1609 414e2b998fd29879d233be86fcd54e6d 334 Gene3D G3DSA:3.40.50.720 123 324 4.5E-112 T 14-10-2018 VS_1609 414e2b998fd29879d233be86fcd54e6d 334 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 331 4.4E-13 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VS_1609 414e2b998fd29879d233be86fcd54e6d 334 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 130 308 4.4E-46 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VS_1609 414e2b998fd29879d233be86fcd54e6d 334 SUPERFAMILY SSF52283 22 143 1.23E-19 T 14-10-2018 VS_1609 414e2b998fd29879d233be86fcd54e6d 334 SUPERFAMILY SSF51735 125 308 4.31E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0962 62f14b334af64c783570d84c89aa7a20 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.5E-45 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related VS_0962 62f14b334af64c783570d84c89aa7a20 112 PIRSF PIRSF005894 1 107 1.5E-51 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VS_0962 62f14b334af64c783570d84c89aa7a20 112 Gene3D G3DSA:3.40.30.10 2 107 5.0E-30 T 14-10-2018 VS_0962 62f14b334af64c783570d84c89aa7a20 112 SUPERFAMILY SSF52833 1 104 4.63E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0962 62f14b334af64c783570d84c89aa7a20 112 Pfam PF00462 Glutaredoxin 16 80 8.0E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 2.6E-195 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 Gene3D G3DSA:3.55.50.10 96 187 8.3E-91 T 14-10-2018 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 SUPERFAMILY SSF69279 7 183 2.55E-55 T 14-10-2018 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 Pfam PF05954 Phage late control gene D protein (GPD) 27 331 2.9E-76 T 14-10-2018 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 Gene3D G3DSA:2.40.50.230 359 458 2.0E-42 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 SUPERFAMILY SSF69279 200 364 1.34E-30 T 14-10-2018 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 Gene3D G3DSA:2.30.110.50 17 332 8.3E-91 T 14-10-2018 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 SUPERFAMILY SSF69349 444 683 1.18E-46 T 14-10-2018 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 SUPERFAMILY SSF69255 367 454 8.89E-32 T 14-10-2018 VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 1.6E-126 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VS_II1004 f4b2248f35aa3fe29647bfd10d1ba9c8 692 Gene3D G3DSA:3.30.1920.30 229 288 8.3E-91 T 14-10-2018 VS_0194 c7aa6e8b29733da6fc6bba91dc1f02c0 354 Gene3D G3DSA:3.40.50.2000 167 346 4.1E-39 T 14-10-2018 VS_0194 c7aa6e8b29733da6fc6bba91dc1f02c0 354 Gene3D G3DSA:3.40.50.2000 4 155 2.6E-25 T 14-10-2018 VS_0194 c7aa6e8b29733da6fc6bba91dc1f02c0 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 308 9.2E-55 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VS_0194 c7aa6e8b29733da6fc6bba91dc1f02c0 354 SUPERFAMILY SSF53756 9 345 2.04E-82 T 14-10-2018 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 5.2E-83 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.9E-134 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_0808 50fb56f05d9013b3a12f8be7abf18f7b 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.044 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VS_II0721 8fa40538dc0dcac0a7008422a328810a 137 Gene3D G3DSA:2.40.50.200 29 137 7.6E-17 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VS_II0721 8fa40538dc0dcac0a7008422a328810a 137 SUPERFAMILY SSF101756 45 137 1.96E-20 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VS_II0721 8fa40538dc0dcac0a7008422a328810a 137 Pfam PF04076 Bacterial OB fold (BOF) protein 49 135 1.3E-9 T 14-10-2018 IPR005220 Bacterial OB-fold VS_II0654 60f9f4c92cf39117ef420268906907e4 670 SUPERFAMILY SSF48371 40 253 7.85E-7 T 14-10-2018 IPR016024 Armadillo-type fold VS_II0342 3cc05c8aac6fea2070d9a5dfd772b435 387 Pfam PF12146 Serine aminopeptidase, S33 85 201 6.0E-13 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VS_II0342 3cc05c8aac6fea2070d9a5dfd772b435 387 SUPERFAMILY SSF53474 66 283 5.4E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0342 3cc05c8aac6fea2070d9a5dfd772b435 387 Gene3D G3DSA:3.40.50.1820 74 287 1.7E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 516 549 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 Pfam PF03958 Bacterial type II/III secretion system short domain 253 318 2.0E-10 T 14-10-2018 IPR005644 NolW-like VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 SMART SM00965 179 227 2.3E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 Gene3D G3DSA:2.60.40.3470 22 135 5.1E-15 T 14-10-2018 VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 154 570 5.5E-161 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 Gene3D G3DSA:3.55.50.30 136 250 5.0E-35 T 14-10-2018 VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 Gene3D G3DSA:3.30.1370.120 251 317 1.2E-10 T 14-10-2018 IPR038591 NolW-like superfamily VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 Pfam PF00263 Bacterial type II and III secretion system protein 412 570 1.2E-45 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 535 553 8.8E-20 T 14-10-2018 IPR001775 GspD/PilQ family VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 558 572 8.8E-20 T 14-10-2018 IPR001775 GspD/PilQ family VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 443 453 8.8E-20 T 14-10-2018 IPR001775 GspD/PilQ family VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 408 432 8.8E-20 T 14-10-2018 IPR001775 GspD/PilQ family VS_2873 fe7e2ce597dcdf1d9f9d4d6e4f7b0a6d 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 318 328 8.8E-20 T 14-10-2018 IPR001775 GspD/PilQ family VS_2753 b8fe75fd5e6672db6ba6894a8bbcb9ed 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 174 3.7E-63 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_2753 b8fe75fd5e6672db6ba6894a8bbcb9ed 185 SUPERFAMILY SSF56784 21 178 8.41E-42 T 14-10-2018 IPR036412 HAD-like superfamily VS_2753 b8fe75fd5e6672db6ba6894a8bbcb9ed 185 PIRSF PIRSF006118 10 185 9.0E-75 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_2753 b8fe75fd5e6672db6ba6894a8bbcb9ed 185 Gene3D G3DSA:3.40.50.1000 1 185 3.8E-60 T 14-10-2018 IPR023214 HAD superfamily VS_2753 b8fe75fd5e6672db6ba6894a8bbcb9ed 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 158 9.7E-10 T 14-10-2018 VS_2753 b8fe75fd5e6672db6ba6894a8bbcb9ed 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 138 1.4E-13 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VS_II1250 03785060cd79f84dd7bffdd4ebc45da6 441 Pfam PF13641 Glycosyltransferase like family 2 64 297 4.2E-18 T 14-10-2018 VS_II1250 03785060cd79f84dd7bffdd4ebc45da6 441 Gene3D G3DSA:3.90.550.10 52 287 7.9E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_II1250 03785060cd79f84dd7bffdd4ebc45da6 441 SUPERFAMILY SSF53448 59 350 3.24E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2260 15d94026a87afb97b8b3c14dca8d54a7 531 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 15 517 3.8E-208 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VS_2260 15d94026a87afb97b8b3c14dca8d54a7 531 Gene3D G3DSA:3.30.1360.60 443 520 8.3E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_2260 15d94026a87afb97b8b3c14dca8d54a7 531 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 419 506 8.8E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VS_2260 15d94026a87afb97b8b3c14dca8d54a7 531 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 459 476 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_2260 15d94026a87afb97b8b3c14dca8d54a7 531 SUPERFAMILY SSF55604 446 518 4.84E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_2260 15d94026a87afb97b8b3c14dca8d54a7 531 Pfam PF02378 Phosphotransferase system, EIIC 23 361 3.6E-63 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_2260 15d94026a87afb97b8b3c14dca8d54a7 531 Pfam PF00367 phosphotransferase system, EIIB 448 481 1.5E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_0992 5f5bddd795d128e042d75119e93e9caf 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 2.7E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0992 5f5bddd795d128e042d75119e93e9caf 300 SUPERFAMILY SSF161098 96 281 1.44E-26 T 14-10-2018 IPR035906 MetI-like superfamily VS_0992 5f5bddd795d128e042d75119e93e9caf 300 Gene3D G3DSA:1.10.3720.10 95 296 3.4E-20 T 14-10-2018 IPR035906 MetI-like superfamily VS_0992 5f5bddd795d128e042d75119e93e9caf 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 2.3E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VS_2307 9dc2b068a00d5a46429caad5535529a4 156 SUPERFAMILY SSF52833 5 152 1.19E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2307 9dc2b068a00d5a46429caad5535529a4 156 Gene3D G3DSA:3.40.30.10 3 153 6.2E-44 T 14-10-2018 VS_2307 9dc2b068a00d5a46429caad5535529a4 156 Pfam PF00578 AhpC/TSA family 7 134 1.5E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 8.2E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 8.2E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 8.2E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 8.2E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 8.2E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 8.2E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 7.6E-134 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 Pfam PF01235 Sodium:alanine symporter family 51 472 2.2E-148 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0633 93a4c837ba5c028b2549ba8434be711f 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SMART SM00387 573 684 4.4E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 1.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Pfam PF13188 PAS domain 880 917 1.5E-4 T 14-10-2018 IPR000014 PAS domain VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SUPERFAMILY SSF55785 862 932 2.79E-6 T 14-10-2018 IPR035965 PAS domain superfamily VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Pfam PF00672 HAMP domain 379 427 3.4E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SUPERFAMILY SSF55874 516 688 4.71E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SMART SM00388 459 527 8.7E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SMART SM00091 874 939 0.0016 T 14-10-2018 IPR000014 PAS domain VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Pfam PF00072 Response regulator receiver domain 726 836 2.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Gene3D G3DSA:3.30.450.20 238 358 3.3E-6 T 14-10-2018 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SUPERFAMILY SSF47384 445 527 4.9E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Gene3D G3DSA:1.10.287.130 427 525 1.1E-22 T 14-10-2018 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SMART SM00304 377 430 8.3E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Gene3D G3DSA:1.10.8.500 376 426 3.7E-17 T 14-10-2018 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SUPERFAMILY SSF158472 378 427 9.68E-11 T 14-10-2018 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SUPERFAMILY SSF52172 720 848 1.57E-40 T 14-10-2018 IPR011006 CheY-like superfamily VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Gene3D G3DSA:3.30.450.20 864 951 2.1E-6 T 14-10-2018 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Gene3D G3DSA:3.40.50.2300 724 863 7.2E-41 T 14-10-2018 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 SMART SM00448 723 836 2.6E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2505 ef2011acbf8c2d172b49b8d04788e39a 1129 Gene3D G3DSA:3.30.565.10 526 689 2.6E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1513 7359e160dc383636a900b774472506ae 288 Gene3D G3DSA:3.30.200.20 1 93 3.0E-22 T 14-10-2018 VS_1513 7359e160dc383636a900b774472506ae 288 Gene3D G3DSA:3.90.1200.10 97 287 3.3E-64 T 14-10-2018 VS_1513 7359e160dc383636a900b774472506ae 288 SUPERFAMILY SSF56112 3 276 1.53E-38 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_1513 7359e160dc383636a900b774472506ae 288 Pfam PF03881 Fructosamine kinase 1 286 1.2E-123 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VS_1513 7359e160dc383636a900b774472506ae 288 PIRSF PIRSF006221 1 288 6.8E-102 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VS_II1142 72d31ab084152cf5b65d3e3cb5cddd1f 234 SUPERFAMILY SSF54637 84 228 3.28E-26 T 14-10-2018 IPR029069 HotDog domain superfamily VS_II1142 72d31ab084152cf5b65d3e3cb5cddd1f 234 Gene3D G3DSA:3.10.129.10 84 232 4.3E-32 T 14-10-2018 VS_II1142 72d31ab084152cf5b65d3e3cb5cddd1f 234 Pfam PF01575 MaoC like domain 90 207 6.0E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain VS_3016 5ac674e4b52ab35f93222a0fadfc5aeb 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 272 2.1E-117 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VS_3016 5ac674e4b52ab35f93222a0fadfc5aeb 280 Pfam PF01694 Rhomboid family 134 271 6.5E-31 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VS_3016 5ac674e4b52ab35f93222a0fadfc5aeb 280 Gene3D G3DSA:1.20.1540.10 94 273 2.1E-52 T 14-10-2018 IPR035952 Rhomboid-like superfamily VS_3016 5ac674e4b52ab35f93222a0fadfc5aeb 280 SUPERFAMILY SSF144091 96 272 1.57E-39 T 14-10-2018 VS_3016 5ac674e4b52ab35f93222a0fadfc5aeb 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 7.0E-32 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VS_3016 5ac674e4b52ab35f93222a0fadfc5aeb 280 Gene3D G3DSA:3.30.70.2350 1 68 7.5E-22 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 Gene3D G3DSA:3.20.20.450 397 644 4.9E-83 T 14-10-2018 IPR035919 EAL domain superfamily VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 228 381 6.6E-40 T 14-10-2018 IPR000160 GGDEF domain VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 227 383 2.3E-35 T 14-10-2018 IPR000160 GGDEF domain VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 SUPERFAMILY SSF141868 401 643 1.96E-75 T 14-10-2018 IPR035919 EAL domain superfamily VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 SMART SM00267 217 385 1.3E-52 T 14-10-2018 IPR000160 GGDEF domain VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 SMART SM00052 395 638 6.5E-84 T 14-10-2018 IPR001633 EAL domain VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 Pfam PF00563 EAL domain 402 633 2.2E-63 T 14-10-2018 IPR001633 EAL domain VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 SUPERFAMILY SSF55073 233 387 1.49E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II1184 ee3b10e28baac2b8c901e8a8dea1046f 647 Gene3D G3DSA:3.30.70.270 223 396 1.8E-51 T 14-10-2018 VS_II0389 95845e963b875fc195046f30ebd505fb 526 Pfam PF00483 Nucleotidyl transferase 19 327 4.0E-66 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VS_II0389 95845e963b875fc195046f30ebd505fb 526 SUPERFAMILY SSF51182 226 510 1.96E-84 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II0389 95845e963b875fc195046f30ebd505fb 526 SUPERFAMILY SSF53448 16 322 6.5E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_II0389 95845e963b875fc195046f30ebd505fb 526 Gene3D G3DSA:2.60.120.10 389 504 1.2E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II0389 95845e963b875fc195046f30ebd505fb 526 Pfam PF01050 Mannose-6-phosphate isomerase 356 506 8.4E-65 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 VS_II0389 95845e963b875fc195046f30ebd505fb 526 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 17 510 2.7E-218 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 VS_II0389 95845e963b875fc195046f30ebd505fb 526 Gene3D G3DSA:3.90.550.10 16 388 4.3E-118 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2042 7523c84e9c843542b2ef9383f4c214bb 555 Gene3D G3DSA:1.25.40.10 134 302 4.5E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2042 7523c84e9c843542b2ef9383f4c214bb 555 Pfam PF00072 Response regulator receiver domain 9 124 2.3E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2042 7523c84e9c843542b2ef9383f4c214bb 555 SMART SM00448 6 124 1.5E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2042 7523c84e9c843542b2ef9383f4c214bb 555 SUPERFAMILY SSF52172 5 137 2.85E-19 T 14-10-2018 IPR011006 CheY-like superfamily VS_2042 7523c84e9c843542b2ef9383f4c214bb 555 SUPERFAMILY SSF48452 141 298 2.66E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2042 7523c84e9c843542b2ef9383f4c214bb 555 Gene3D G3DSA:3.40.50.2300 2 133 1.5E-17 T 14-10-2018 VS_2042 7523c84e9c843542b2ef9383f4c214bb 555 PIRSF PIRSF011521 1 539 1.9E-159 T 14-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 Pfam PF00654 Voltage gated chloride channel 100 448 2.7E-95 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 SUPERFAMILY SSF81340 34 463 6.93E-116 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 PRINTS PR00762 Chloride channel signature 416 435 4.0E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 PRINTS PR00762 Chloride channel signature 194 213 4.0E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 PRINTS PR00762 Chloride channel signature 113 130 4.0E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 PRINTS PR00762 Chloride channel signature 363 383 4.0E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 PRINTS PR00762 Chloride channel signature 398 414 4.0E-29 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 14 480 50.467 T 14-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 VS_II0566 6d9d2f3d447a3170c68120e44c7ffb52 481 Gene3D G3DSA:1.10.3080.10 28 472 2.4E-145 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VS_II1264 cd00b9ededfe59af46ca6a0eb8a6f823 511 Gene3D G3DSA:3.10.105.10 254 481 1.1E-98 T 14-10-2018 VS_II1264 cd00b9ededfe59af46ca6a0eb8a6f823 511 Gene3D G3DSA:3.40.190.10 60 493 1.1E-98 T 14-10-2018 VS_II1264 cd00b9ededfe59af46ca6a0eb8a6f823 511 SUPERFAMILY SSF53850 48 507 1.58E-100 T 14-10-2018 VS_II1264 cd00b9ededfe59af46ca6a0eb8a6f823 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 421 1.9E-69 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II1264 cd00b9ededfe59af46ca6a0eb8a6f823 511 PIRSF PIRSF002741 23 510 4.6E-75 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_3140 e3f447255f72718a9db05146b6b3b17a 199 Gene3D G3DSA:3.40.30.10 17 199 2.2E-53 T 14-10-2018 VS_3140 e3f447255f72718a9db05146b6b3b17a 199 SUPERFAMILY SSF52833 22 198 1.68E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_3140 e3f447255f72718a9db05146b6b3b17a 199 Pfam PF01323 DSBA-like thioredoxin domain 41 189 1.6E-28 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VS_3140 e3f447255f72718a9db05146b6b3b17a 199 PIRSF PIRSF001488 1 199 3.4E-70 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VS_3140 e3f447255f72718a9db05146b6b3b17a 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VS_II0468 2654d9617dff62081e0ea69eaf964546 152 Pfam PF01478 Type IV leader peptidase family 16 112 7.8E-10 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VS_1225 a0ebd5d86fb0349512d580494431a360 645 SUPERFAMILY SSF52540 13 556 6.76E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1225 a0ebd5d86fb0349512d580494431a360 645 Pfam PF12532 Protein of unknown function (DUF3732) 452 632 4.7E-53 T 14-10-2018 IPR022205 Protein of unknown function DUF3732 VS_1225 a0ebd5d86fb0349512d580494431a360 645 Gene3D G3DSA:3.40.50.300 10 240 2.4E-5 T 14-10-2018 VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 Gene3D G3DSA:2.60.40.10 2270 2371 2.1E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 Gene3D G3DSA:2.60.40.10 2372 2470 1.8E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1142 1243 2.5E-17 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2147 2228 3.5E-8 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 917 1030 2.1E-19 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2044 2146 2.2E-23 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 372 461 3.1E-27 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 488 584 4.7E-30 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 695 791 1.6E-29 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 796 891 7.6E-30 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1837 1931 1.3E-28 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1733 1832 5.8E-19 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 183 260 4.8E-11 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1935 2034 6.0E-27 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1393 1492 3.0E-20 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1639 1716 2.3E-14 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 589 690 1.6E-28 T 14-10-2018 IPR010221 VCBS repeat VS_II0512 ee3005368ed5cedc59769feddb48a8b2 2844 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 271 366 4.2E-28 T 14-10-2018 IPR010221 VCBS repeat VS_2222 08e36d1496a563b3ed7903fc8312e0fb 186 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 11 158 1.7E-34 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VS_2222 08e36d1496a563b3ed7903fc8312e0fb 186 Pfam PF03843 Outer membrane lipoprotein Slp family 21 163 8.9E-40 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VS_2222 08e36d1496a563b3ed7903fc8312e0fb 186 PIRSF PIRSF004982 5 186 2.2E-52 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 PIRSF PIRSF036431 4 639 1.7E-155 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 635 1.7E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 SMART SM00388 399 467 0.0037 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 Gene3D G3DSA:3.30.450.20 59 182 2.8E-58 T 14-10-2018 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 Gene3D G3DSA:3.30.565.10 467 639 2.8E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 SUPERFAMILY SSF103190 65 191 4.51E-15 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 SUPERFAMILY SSF47384 394 463 2.94E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 SUPERFAMILY SSF55874 465 635 4.19E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 Pfam PF02743 Cache domain 37 221 4.0E-14 T 14-10-2018 IPR033479 Double Cache domain 1 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 Gene3D G3DSA:1.10.287.130 375 462 6.9E-15 T 14-10-2018 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 SMART SM00387 510 637 8.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 634 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 582 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 596 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0010 c397328e06983ef3a066f4fe082f1e6f 640 Gene3D G3DSA:3.30.450.20 50 253 2.8E-58 T 14-10-2018 VS_3161 287061a781c2cd27f6573d3ac1b12e8d 257 PIRSF PIRSF009320 86 246 1.2E-8 T 14-10-2018 VS_3161 287061a781c2cd27f6573d3ac1b12e8d 257 PIRSF PIRSF009320 2 87 2.1E-12 T 14-10-2018 VS_3161 287061a781c2cd27f6573d3ac1b12e8d 257 Gene3D G3DSA:3.40.50.300 1 255 2.8E-77 T 14-10-2018 VS_3161 287061a781c2cd27f6573d3ac1b12e8d 257 SUPERFAMILY SSF52540 2 254 4.38E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3161 287061a781c2cd27f6573d3ac1b12e8d 257 Pfam PF13614 AAA domain 2 178 5.9E-63 T 14-10-2018 IPR025669 AAA domain VS_0011 3786622f21fe274fe5c1206a4e757681 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.7E-35 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VS_0011 3786622f21fe274fe5c1206a4e757681 366 Gene3D G3DSA:3.10.150.10 1 122 1.9E-41 T 14-10-2018 VS_0011 3786622f21fe274fe5c1206a4e757681 366 Gene3D G3DSA:3.10.150.10 248 366 9.9E-39 T 14-10-2018 VS_0011 3786622f21fe274fe5c1206a4e757681 366 SUPERFAMILY SSF55979 245 366 2.25E-35 T 14-10-2018 VS_0011 3786622f21fe274fe5c1206a4e757681 366 SMART SM00480 17 362 5.3E-141 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VS_0011 3786622f21fe274fe5c1206a4e757681 366 SUPERFAMILY SSF55979 1 118 1.26E-29 T 14-10-2018 VS_0011 3786622f21fe274fe5c1206a4e757681 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 2.1E-38 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VS_0011 3786622f21fe274fe5c1206a4e757681 366 SUPERFAMILY SSF55979 126 244 7.33E-29 T 14-10-2018 VS_0011 3786622f21fe274fe5c1206a4e757681 366 Gene3D G3DSA:3.10.150.10 124 247 2.9E-36 T 14-10-2018 VS_0011 3786622f21fe274fe5c1206a4e757681 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 9.2E-108 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VS_0011 3786622f21fe274fe5c1206a4e757681 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.9E-37 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VS_0011 3786622f21fe274fe5c1206a4e757681 366 PIRSF PIRSF000804 1 366 5.7E-117 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VS_2882 6283f587a4301446c5cd04c9c5217a64 115 SUPERFAMILY SSF55298 4 113 5.34E-33 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_2882 6283f587a4301446c5cd04c9c5217a64 115 Pfam PF01042 Endoribonuclease L-PSP 7 113 3.4E-25 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_2882 6283f587a4301446c5cd04c9c5217a64 115 Gene3D G3DSA:3.30.1330.40 1 115 1.9E-42 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 PIRSF PIRSF015761 15 414 1.9E-32 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 SUPERFAMILY SSF53067 2 144 4.27E-39 T 14-10-2018 VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 SUPERFAMILY SSF53067 146 249 2.46E-18 T 14-10-2018 VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 Pfam PF12693 GspL periplasmic domain 255 413 8.6E-49 T 14-10-2018 IPR025691 GspL periplasmic domain VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 Gene3D G3DSA:3.30.420.380 3 248 1.7E-82 T 14-10-2018 VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 Pfam PF05134 Type II secretion system (T2SS), protein L 5 250 1.9E-62 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 Gene3D G3DSA:3.30.420.370 142 226 1.7E-82 T 14-10-2018 VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 413 7.0E-85 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VS_0143 ec3d17ebad1f88fb0380826ca93c7250 415 Gene3D G3DSA:3.30.1360.100 329 415 2.6E-26 T 14-10-2018 VS_1048 4bc5ae3fbed4e6f65cac1579addcf260 251 Pfam PF06629 MltA-interacting protein MipA 30 251 3.1E-42 T 14-10-2018 IPR010583 MltA-interacting MipA VS_1119 34f1b6ead1e2a652eaddfcca50a783bc 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 1.6E-101 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VS_1119 34f1b6ead1e2a652eaddfcca50a783bc 353 Gene3D G3DSA:3.40.50.10800 115 340 2.6E-94 T 14-10-2018 VS_1119 34f1b6ead1e2a652eaddfcca50a783bc 353 Gene3D G3DSA:3.40.50.10800 32 322 2.6E-94 T 14-10-2018 VS_1119 34f1b6ead1e2a652eaddfcca50a783bc 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 31 341 3.5E-113 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VS_1119 34f1b6ead1e2a652eaddfcca50a783bc 353 SUPERFAMILY SSF142754 29 341 9.68E-106 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VS_1119 34f1b6ead1e2a652eaddfcca50a783bc 353 Gene3D G3DSA:3.40.50.10800 200 295 2.6E-94 T 14-10-2018 VS_2314 6ada742d0951561aaae1cd5211cf4edf 144 Pfam PF09842 Predicted membrane protein (DUF2069) 18 120 5.4E-33 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SUPERFAMILY SSF55073 499 653 1.02E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SUPERFAMILY SSF48452 230 414 9.67E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 492 652 7.1E-36 T 14-10-2018 IPR000160 GGDEF domain VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 Gene3D G3DSA:3.30.70.270 488 657 1.1E-39 T 14-10-2018 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 494 650 1.0E-33 T 14-10-2018 IPR000160 GGDEF domain VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 Pfam PF13181 Tetratricopeptide repeat 230 259 0.034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SMART SM00267 483 655 2.6E-37 T 14-10-2018 IPR000160 GGDEF domain VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 Gene3D G3DSA:1.25.40.10 303 475 3.1E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 Pfam PF13424 Tetratricopeptide repeat 267 336 2.5E-9 T 14-10-2018 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 Gene3D G3DSA:1.25.40.10 110 302 1.5E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SMART SM00028 347 380 39.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SMART SM00028 307 340 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SMART SM00028 191 224 310.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SMART SM00028 228 261 7.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1390 69ed2cb6489ea5f72bba74dd1623a43b 662 SMART SM00028 267 300 0.06 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2087 8c83c5382d07c2c1dd2932281c177a6e 328 Pfam PF02885 Glycosyl transferase family, helical bundle domain 20 77 1.5E-12 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2087 8c83c5382d07c2c1dd2932281c177a6e 328 Gene3D G3DSA:1.20.970.10 12 81 1.3E-16 T 14-10-2018 VS_2087 8c83c5382d07c2c1dd2932281c177a6e 328 SUPERFAMILY SSF52418 82 323 3.77E-41 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2087 8c83c5382d07c2c1dd2932281c177a6e 328 Gene3D G3DSA:3.40.1030.10 82 325 2.9E-38 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2087 8c83c5382d07c2c1dd2932281c177a6e 328 SUPERFAMILY SSF47648 18 80 4.45E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 Pfam PF13185 GAF domain 385 531 7.4E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SMART SM00065 386 543 0.0033 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 Gene3D G3DSA:3.30.70.270 542 718 1.1E-36 T 14-10-2018 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 554 718 5.4E-33 T 14-10-2018 IPR000160 GGDEF domain VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SMART SM00267 542 719 6.9E-30 T 14-10-2018 IPR000160 GGDEF domain VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SUPERFAMILY SSF55781 371 541 1.98E-15 T 14-10-2018 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SUPERFAMILY SSF81901 67 296 1.12E-15 T 14-10-2018 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SMART SM00028 105 138 140.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SMART SM00028 223 256 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SMART SM00028 144 177 4.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SMART SM00028 183 216 260.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SMART SM00028 65 98 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 Gene3D G3DSA:3.30.450.40 372 541 3.3E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 Gene3D G3DSA:1.25.40.10 226 371 1.1E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 Pfam PF00990 Diguanylate cyclase, GGDEF domain 554 714 5.5E-31 T 14-10-2018 IPR000160 GGDEF domain VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 SUPERFAMILY SSF55073 558 718 1.02E-30 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0449 97fcbc344c0fc394f1f1c1f3d9464c40 720 Gene3D G3DSA:1.25.40.10 46 225 1.1E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 Gene3D G3DSA:3.30.230.10 542 769 5.4E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_II1375 1386c8c88831b811d57659ebe77153e4 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 5.5E-7 T 14-10-2018 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 5.5E-7 T 14-10-2018 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 5.5E-7 T 14-10-2018 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 Pfam PF13654 AAA domain 25 539 3.2E-182 T 14-10-2018 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 SUPERFAMILY SSF54211 564 756 2.66E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_II1375 1386c8c88831b811d57659ebe77153e4 786 Gene3D G3DSA:1.10.8.60 449 537 4.0E-13 T 14-10-2018 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 SUPERFAMILY SSF52540 30 537 7.06E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1375 1386c8c88831b811d57659ebe77153e4 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 3.7E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 Gene3D G3DSA:3.40.50.300 5 181 1.1E-27 T 14-10-2018 VS_II1375 1386c8c88831b811d57659ebe77153e4 786 Gene3D G3DSA:3.40.50.300 224 448 3.2E-56 T 14-10-2018 VS_0362 81e9458cc87795659ae75cc15b686980 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.5E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0362 81e9458cc87795659ae75cc15b686980 85 Gene3D G3DSA:2.40.50.100 21 85 4.3E-31 T 14-10-2018 VS_0362 81e9458cc87795659ae75cc15b686980 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0362 81e9458cc87795659ae75cc15b686980 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0362 81e9458cc87795659ae75cc15b686980 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.801 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0362 81e9458cc87795659ae75cc15b686980 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.5E-42 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0362 81e9458cc87795659ae75cc15b686980 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.2E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0362 81e9458cc87795659ae75cc15b686980 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.2E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0362 81e9458cc87795659ae75cc15b686980 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.2E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0362 81e9458cc87795659ae75cc15b686980 85 SUPERFAMILY SSF110324 2 80 3.84E-34 T 14-10-2018 VS_2058 7185d0063135a575ab1a61cb43a8c244 226 SUPERFAMILY SSF52540 6 223 3.3E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2058 7185d0063135a575ab1a61cb43a8c244 226 Pfam PF02224 Cytidylate kinase 8 221 7.5E-78 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VS_2058 7185d0063135a575ab1a61cb43a8c244 226 Gene3D G3DSA:3.40.50.300 1 226 3.5E-82 T 14-10-2018 VS_2058 7185d0063135a575ab1a61cb43a8c244 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 3.1E-84 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VS_2058 7185d0063135a575ab1a61cb43a8c244 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.988 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VS_0547 bcd41d0028115195500e37a7a0b9a8f1 357 SUPERFAMILY SSF51569 8 344 1.74E-137 T 14-10-2018 VS_0547 bcd41d0028115195500e37a7a0b9a8f1 357 Pfam PF00793 DAHP synthetase I family 42 340 9.1E-105 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_0547 bcd41d0028115195500e37a7a0b9a8f1 357 PIRSF PIRSF001361 1 353 2.2E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VS_0547 bcd41d0028115195500e37a7a0b9a8f1 357 Gene3D G3DSA:3.20.20.70 3 348 4.0E-156 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0547 bcd41d0028115195500e37a7a0b9a8f1 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 346 4.4E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VS_II0794 488a0e5d352b6bdb67d63d87523d3361 263 SMART SM00052 11 257 1.7E-12 T 14-10-2018 IPR001633 EAL domain VS_II0794 488a0e5d352b6bdb67d63d87523d3361 263 Gene3D G3DSA:3.20.20.450 22 262 2.8E-44 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0794 488a0e5d352b6bdb67d63d87523d3361 263 Pfam PF00563 EAL domain 29 252 2.7E-45 T 14-10-2018 IPR001633 EAL domain VS_II0794 488a0e5d352b6bdb67d63d87523d3361 263 SUPERFAMILY SSF141868 30 256 1.57E-43 T 14-10-2018 IPR035919 EAL domain superfamily VS_2787 807856639c9fecf03d989568168c118f 574 Gene3D G3DSA:3.30.70.1450 206 285 1.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_2787 807856639c9fecf03d989568168c118f 574 Gene3D G3DSA:3.30.70.1450 289 360 5.3E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_2787 807856639c9fecf03d989568168c118f 574 SUPERFAMILY SSF116726 289 349 1.96E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_2787 807856639c9fecf03d989568168c118f 574 SUPERFAMILY SSF116726 206 283 1.83E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_2787 807856639c9fecf03d989568168c118f 574 Pfam PF02080 TrkA-C domain 293 349 7.6E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_2787 807856639c9fecf03d989568168c118f 574 Pfam PF02080 TrkA-C domain 209 278 5.9E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_2787 807856639c9fecf03d989568168c118f 574 Pfam PF03600 Citrate transporter 21 518 1.4E-31 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VS_2556 b2bfc91a3848176464e15c4b25304d74 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.0E-68 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VS_2556 b2bfc91a3848176464e15c4b25304d74 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 117.838 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VS_2556 b2bfc91a3848176464e15c4b25304d74 246 Gene3D G3DSA:1.10.1270.20 161 246 2.6E-33 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VS_2556 b2bfc91a3848176464e15c4b25304d74 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.5E-107 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VS_2556 b2bfc91a3848176464e15c4b25304d74 246 SUPERFAMILY SSF75217 1 243 5.36E-102 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_2556 b2bfc91a3848176464e15c4b25304d74 246 PIRSF PIRSF000386 1 245 4.1E-100 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VS_2556 b2bfc91a3848176464e15c4b25304d74 246 Gene3D G3DSA:3.40.1280.10 1 160 1.8E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 SUPERFAMILY SSF50249 2 63 9.14E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 SUPERFAMILY SSF47781 66 136 1.56E-19 T 14-10-2018 IPR010994 RuvA domain 2-like VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 202 8.4E-64 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 SUPERFAMILY SSF46929 158 202 2.62E-12 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 SMART SM00278 108 127 0.071 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 SMART SM00278 73 92 540.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.2E-14 T 14-10-2018 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 Gene3D G3DSA:1.10.150.20 67 143 1.4E-25 T 14-10-2018 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 Pfam PF07499 RuvA, C-terminal domain 158 202 2.1E-17 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 31.713 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 Gene3D G3DSA:2.40.50.140 1 65 1.2E-27 T 14-10-2018 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 Gene3D G3DSA:1.10.8.10 156 203 6.6E-24 T 14-10-2018 VS_1107 7478fc7e0db0df35d08e74949a5a54be 203 Pfam PF01330 RuvA N terminal domain 2 62 8.3E-21 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VS_II1073 69e8decdc3bc0f41e7417a56c20bd278 218 Pfam PF07885 Ion channel 126 210 1.6E-15 T 14-10-2018 IPR013099 Potassium channel domain VS_II1073 69e8decdc3bc0f41e7417a56c20bd278 218 SUPERFAMILY SSF81324 118 211 2.62E-17 T 14-10-2018 VS_II1073 69e8decdc3bc0f41e7417a56c20bd278 218 Gene3D G3DSA:1.10.287.70 116 218 7.2E-18 T 14-10-2018 VS_II0906 05d17a4586bd15d3cafe739386b51de6 293 Gene3D G3DSA:3.40.190.290 91 291 8.0E-36 T 14-10-2018 VS_II0906 05d17a4586bd15d3cafe739386b51de6 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0906 05d17a4586bd15d3cafe739386b51de6 293 Gene3D G3DSA:1.10.10.10 2 90 4.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0906 05d17a4586bd15d3cafe739386b51de6 293 SUPERFAMILY SSF46785 2 111 1.36E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0906 05d17a4586bd15d3cafe739386b51de6 293 SUPERFAMILY SSF53850 89 290 1.49E-34 T 14-10-2018 VS_II0906 05d17a4586bd15d3cafe739386b51de6 293 Pfam PF03466 LysR substrate binding domain 88 288 3.1E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1134 64aa2419b201ea2cd3208a448dca4896 245 Gene3D G3DSA:3.40.50.1820 15 243 4.2E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1134 64aa2419b201ea2cd3208a448dca4896 245 Pfam PF01738 Dienelactone hydrolase family 41 242 1.0E-34 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VS_1134 64aa2419b201ea2cd3208a448dca4896 245 SUPERFAMILY SSF53474 21 240 1.5E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1765 fce689826f70d4f444c89fa18e437e03 795 Pfam PF01588 Putative tRNA binding domain 45 145 7.4E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VS_1765 fce689826f70d4f444c89fa18e437e03 795 SUPERFAMILY SSF55681 467 689 1.09E-52 T 14-10-2018 VS_1765 fce689826f70d4f444c89fa18e437e03 795 SUPERFAMILY SSF50249 35 197 6.12E-48 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1765 fce689826f70d4f444c89fa18e437e03 795 Gene3D G3DSA:3.30.56.10 7 179 2.0E-69 T 14-10-2018 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Gene3D G3DSA:2.40.50.140 39 154 2.0E-69 T 14-10-2018 VS_1765 fce689826f70d4f444c89fa18e437e03 795 SMART SM00896 701 794 2.6E-42 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Gene3D G3DSA:3.50.40.10 197 393 8.9E-85 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Gene3D G3DSA:3.30.70.380 702 795 9.1E-28 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 SUPERFAMILY SSF56037 197 391 2.35E-77 T 14-10-2018 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.7E-20 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Gene3D G3DSA:3.30.930.10 485 691 6.6E-61 T 14-10-2018 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Gene3D G3DSA:3.30.56.10 403 475 8.3E-27 T 14-10-2018 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.304 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 SMART SM00873 212 385 1.3E-100 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 SUPERFAMILY SSF46955 404 475 5.77E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VS_1765 fce689826f70d4f444c89fa18e437e03 795 SMART SM00874 403 471 1.0E-29 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Pfam PF03483 B3/4 domain 212 385 1.3E-72 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 3.8E-26 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 SUPERFAMILY SSF54991 697 794 1.7E-28 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VS_1765 fce689826f70d4f444c89fa18e437e03 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 5.0E-278 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VS_II1168 1f76ac372e8648d0f433b158f62c5c33 349 SUPERFAMILY SSF56935 112 349 2.85E-16 T 14-10-2018 VS_0958 2e93e51275db825ee3819ecb68960110 902 Gene3D G3DSA:3.40.309.10 217 398 2.8E-167 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_0958 2e93e51275db825ee3819ecb68960110 902 Gene3D G3DSA:3.40.605.10 399 455 1.7E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_0958 2e93e51275db825ee3819ecb68960110 902 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VS_0958 2e93e51275db825ee3819ecb68960110 902 SUPERFAMILY SSF53720 6 454 5.89E-82 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_0958 2e93e51275db825ee3819ecb68960110 902 SUPERFAMILY SSF56796 452 863 2.09E-115 T 14-10-2018 VS_0958 2e93e51275db825ee3819ecb68960110 902 Pfam PF00171 Aldehyde dehydrogenase family 5 402 8.5E-24 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_0958 2e93e51275db825ee3819ecb68960110 902 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VS_0958 2e93e51275db825ee3819ecb68960110 902 Gene3D G3DSA:3.40.605.10 15 216 2.8E-167 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_0958 2e93e51275db825ee3819ecb68960110 902 Gene3D G3DSA:3.40.50.1970 456 642 1.2E-58 T 14-10-2018 VS_0958 2e93e51275db825ee3819ecb68960110 902 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 848 9.6E-114 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VS_0958 2e93e51275db825ee3819ecb68960110 902 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VS_0958 2e93e51275db825ee3819ecb68960110 902 Gene3D G3DSA:1.20.1090.10 643 864 3.8E-60 T 14-10-2018 VS_II1282 dba3c4fab574d7b524221448d2bd3dc8 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 107 3.0E-7 T 14-10-2018 VS_II1282 dba3c4fab574d7b524221448d2bd3dc8 264 Gene3D G3DSA:3.40.50.1000 139 263 3.5E-12 T 14-10-2018 IPR023214 HAD superfamily VS_II1282 dba3c4fab574d7b524221448d2bd3dc8 264 SUPERFAMILY SSF56784 10 255 1.23E-28 T 14-10-2018 IPR036412 HAD-like superfamily VS_II1282 dba3c4fab574d7b524221448d2bd3dc8 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 15 221 3.5E-18 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VS_II1282 dba3c4fab574d7b524221448d2bd3dc8 264 Gene3D G3DSA:3.40.50.1000 4 113 5.0E-11 T 14-10-2018 IPR023214 HAD superfamily VS_1445 406db777a138ab638db62e9f129337b2 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 2.7E-30 T 14-10-2018 IPR022789 Antitoxin ParD VS_1445 406db777a138ab638db62e9f129337b2 80 SUPERFAMILY SSF47598 4 45 1.67E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VS_1445 406db777a138ab638db62e9f129337b2 80 Gene3D G3DSA:1.10.8.1250 10 80 3.2E-25 T 14-10-2018 IPR038296 Antitoxin ParD superfamily VS_1445 406db777a138ab638db62e9f129337b2 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 3.5E-37 T 14-10-2018 IPR022789 Antitoxin ParD VS_2432 80ce05572489095c3a6c3b398cb50bde 309 SUPERFAMILY SSF53448 2 252 3.31E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2432 80ce05572489095c3a6c3b398cb50bde 309 Pfam PF00535 Glycosyl transferase family 2 8 125 2.9E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VS_2432 80ce05572489095c3a6c3b398cb50bde 309 Gene3D G3DSA:3.90.550.10 1 227 7.4E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2427 26cf5eb021d44e89178ea96b0a062da9 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 6.5E-8 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VS_2427 26cf5eb021d44e89178ea96b0a062da9 184 SUPERFAMILY SSF110857 1 123 3.66E-14 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VS_2427 26cf5eb021d44e89178ea96b0a062da9 184 Gene3D G3DSA:3.10.490.10 1 121 4.5E-7 T 14-10-2018 VS_1028 0cfd1b0a9fd252426df2ff747bfe6460 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 3 336 3.8E-100 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VS_1028 0cfd1b0a9fd252426df2ff747bfe6460 338 Gene3D G3DSA:3.30.160.60 302 338 6.4E-18 T 14-10-2018 VS_1028 0cfd1b0a9fd252426df2ff747bfe6460 338 Pfam PF02618 YceG-like family 43 328 3.2E-80 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VS_1028 0cfd1b0a9fd252426df2ff747bfe6460 338 Gene3D G3DSA:3.30.160.60 72 110 2.6E-7 T 14-10-2018 VS_1028 0cfd1b0a9fd252426df2ff747bfe6460 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 32.988 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VS_1061 8fc19cdac9ff95a55da66ae52ccde8e4 481 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 89 464 3.9E-61 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VS_1061 8fc19cdac9ff95a55da66ae52ccde8e4 481 SUPERFAMILY SSF103473 88 469 1.27E-58 T 14-10-2018 IPR036259 MFS transporter superfamily VS_1061 8fc19cdac9ff95a55da66ae52ccde8e4 481 Gene3D G3DSA:1.20.1720.10 90 467 9.0E-98 T 14-10-2018 VS_1061 8fc19cdac9ff95a55da66ae52ccde8e4 481 Pfam PF07690 Major Facilitator Superfamily 95 434 1.2E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_3043 457f9df00e2b32d0c8df220a57f62165 850 SUPERFAMILY SSF55073 439 495 7.06E-8 T 14-10-2018 IPR029787 Nucleotide cyclase VS_3043 457f9df00e2b32d0c8df220a57f62165 850 SUPERFAMILY SSF141868 620 846 1.09E-58 T 14-10-2018 IPR035919 EAL domain superfamily VS_3043 457f9df00e2b32d0c8df220a57f62165 850 SMART SM01204 235 361 8.2E-18 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VS_3043 457f9df00e2b32d0c8df220a57f62165 850 Gene3D G3DSA:3.20.20.450 616 849 1.7E-60 T 14-10-2018 IPR035919 EAL domain superfamily VS_3043 457f9df00e2b32d0c8df220a57f62165 850 Pfam PF08495 FIST N domain 48 233 1.2E-19 T 14-10-2018 IPR013702 FIST domain, N-terminal VS_3043 457f9df00e2b32d0c8df220a57f62165 850 SMART SM00897 45 234 2.8E-21 T 14-10-2018 IPR013702 FIST domain, N-terminal VS_3043 457f9df00e2b32d0c8df220a57f62165 850 Pfam PF00563 EAL domain 620 846 1.0E-57 T 14-10-2018 IPR001633 EAL domain VS_3043 457f9df00e2b32d0c8df220a57f62165 850 Pfam PF00990 Diguanylate cyclase, GGDEF domain 435 491 1.5E-7 T 14-10-2018 IPR000160 GGDEF domain VS_3043 457f9df00e2b32d0c8df220a57f62165 850 SMART SM00052 613 850 3.3E-32 T 14-10-2018 IPR001633 EAL domain VS_3043 457f9df00e2b32d0c8df220a57f62165 850 Gene3D G3DSA:3.30.70.270 418 595 1.1E-12 T 14-10-2018 VS_3043 457f9df00e2b32d0c8df220a57f62165 850 Pfam PF10442 FIST C domain 235 359 4.6E-13 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VS_2764 b64d32ab6c765013f3ec273bff8284b8 174 PIRSF PIRSF016183 1 174 1.4E-71 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VS_2764 b64d32ab6c765013f3ec273bff8284b8 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.963 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VS_2764 b64d32ab6c765013f3ec273bff8284b8 174 Gene3D G3DSA:1.10.60.30 104 173 3.1E-26 T 14-10-2018 VS_2764 b64d32ab6c765013f3ec273bff8284b8 174 Gene3D G3DSA:1.10.60.30 28 102 4.8E-28 T 14-10-2018 VS_2764 b64d32ab6c765013f3ec273bff8284b8 174 Pfam PF04751 Protein of unknown function (DUF615) 18 168 4.7E-56 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VS_2764 b64d32ab6c765013f3ec273bff8284b8 174 SUPERFAMILY SSF158710 28 170 3.53E-52 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily VS_II1480 f29ce2493bcfbe6641380fc56c9366c6 288 Gene3D G3DSA:3.40.50.150 1 288 1.2E-66 T 14-10-2018 VS_II1480 f29ce2493bcfbe6641380fc56c9366c6 288 SUPERFAMILY SSF53335 8 286 2.45E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II1480 f29ce2493bcfbe6641380fc56c9366c6 288 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 35 285 2.4E-43 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VS_II1480 f29ce2493bcfbe6641380fc56c9366c6 288 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 277 29.586 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VS_II0623 7735c850800b462bb14eb553ff164ca5 241 Gene3D G3DSA:1.10.10.10 3 107 1.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0623 7735c850800b462bb14eb553ff164ca5 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 18 93 2.6E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0623 7735c850800b462bb14eb553ff164ca5 241 SMART SM00862 18 93 2.9E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0623 7735c850800b462bb14eb553ff164ca5 241 SUPERFAMILY SSF46894 15 93 1.45E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_0987 91cd17a0e287b25e4731dd87611cd27a 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.894 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0987 91cd17a0e287b25e4731dd87611cd27a 159 Gene3D G3DSA:3.30.70.640 1 159 8.5E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0987 91cd17a0e287b25e4731dd87611cd27a 159 Pfam PF01967 MoaC family 15 150 1.7E-55 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0987 91cd17a0e287b25e4731dd87611cd27a 159 SUPERFAMILY SSF55040 11 155 3.01E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0987 91cd17a0e287b25e4731dd87611cd27a 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.2E-71 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 Pfam PF06071 Protein of unknown function (DUF933) 299 382 4.5E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 Gene3D G3DSA:1.10.150.300 140 220 2.2E-150 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 SUPERFAMILY SSF52540 23 321 1.8E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 Gene3D G3DSA:3.10.20.30 68 382 2.2E-150 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 SUPERFAMILY SSF81271 299 383 2.83E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 PIRSF PIRSF006641 20 383 4.2E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 21 383 3.0E-168 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 Pfam PF01926 50S ribosome-binding GTPase 25 141 5.7E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 22 383 45.241 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 Gene3D G3DSA:3.40.50.300 24 298 2.2E-150 T 14-10-2018 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 46 64 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 107 125 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 45 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0746 6bc83af1688c25e64f28ea78751c00a5 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 90 105 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_1935 74aabd14fb42c9405681853c2e1e46e0 209 SMART SM00028 86 119 4.0E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1935 74aabd14fb42c9405681853c2e1e46e0 209 SMART SM00028 158 191 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1935 74aabd14fb42c9405681853c2e1e46e0 209 Pfam PF13414 TPR repeat 95 125 2.5E-6 T 14-10-2018 VS_1935 74aabd14fb42c9405681853c2e1e46e0 209 Gene3D G3DSA:1.25.40.10 122 208 3.8E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1935 74aabd14fb42c9405681853c2e1e46e0 209 Gene3D G3DSA:1.25.40.10 60 121 1.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1935 74aabd14fb42c9405681853c2e1e46e0 209 SUPERFAMILY SSF48452 72 190 6.13E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 9.6E-6 T 14-10-2018 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 9.6E-6 T 14-10-2018 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 Gene3D G3DSA:1.20.58.100 425 538 6.0E-45 T 14-10-2018 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 Gene3D G3DSA:3.50.50.60 10 404 4.8E-153 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 3.6E-9 T 14-10-2018 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 3.6E-9 T 14-10-2018 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 SUPERFAMILY SSF46977 425 525 2.88E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 SUPERFAMILY SSF56425 238 353 7.78E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 3.0E-212 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 SUPERFAMILY SSF51905 5 447 7.78E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 Gene3D G3DSA:3.90.700.10 248 358 4.8E-153 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 Pfam PF00890 FAD binding domain 10 392 1.8E-101 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 1.2E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 PIRSF PIRSF000171 328 538 9.3E-15 T 14-10-2018 VS_2627 8b0b1ebb083f04de0223160387cb7f51 538 PIRSF PIRSF000171 1 319 1.6E-26 T 14-10-2018 VS_0609 a15d24ff830810bc14c0736cb1053bd8 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 2 107 6.4E-42 T 14-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 VS_0609 a15d24ff830810bc14c0736cb1053bd8 107 Gene3D G3DSA:2.60.300.12 2 107 7.2E-39 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_0609 a15d24ff830810bc14c0736cb1053bd8 107 SUPERFAMILY SSF89360 1 96 7.19E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VS_0609 a15d24ff830810bc14c0736cb1053bd8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.4E-38 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VS_0609 a15d24ff830810bc14c0736cb1053bd8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.9E-57 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 VS_0609 a15d24ff830810bc14c0736cb1053bd8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.0E-27 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VS_0609 a15d24ff830810bc14c0736cb1053bd8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VS_II1476 945b7aff836a08bead6d9ed7be929f7f 311 SUPERFAMILY SSF53850 89 305 1.28E-35 T 14-10-2018 VS_II1476 945b7aff836a08bead6d9ed7be929f7f 311 Gene3D G3DSA:1.10.10.10 3 89 7.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1476 945b7aff836a08bead6d9ed7be929f7f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1476 945b7aff836a08bead6d9ed7be929f7f 311 Gene3D G3DSA:3.40.190.10 91 297 5.3E-61 T 14-10-2018 VS_II1476 945b7aff836a08bead6d9ed7be929f7f 311 Gene3D G3DSA:3.40.190.10 163 272 5.3E-61 T 14-10-2018 VS_II1476 945b7aff836a08bead6d9ed7be929f7f 311 SUPERFAMILY SSF46785 4 85 5.27E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1476 945b7aff836a08bead6d9ed7be929f7f 311 Pfam PF03466 LysR substrate binding domain 89 300 7.2E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 Pfam PF01212 Beta-eliminating lyase 49 437 4.1E-85 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 SUPERFAMILY SSF53383 6 471 1.95E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 9.0E-291 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 Gene3D G3DSA:3.90.1150.10 10 468 1.6E-194 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 PIRSF PIRSF001386 3 472 3.0E-203 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 96.759 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VS_1262 f7ec0b330d6dea8b94694988c3549d2d 490 Gene3D G3DSA:3.40.640.10 61 334 1.6E-194 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II1128 7340210f8654ed60febc4725bd4e41f1 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 678 1.2E-86 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VS_II1128 7340210f8654ed60febc4725bd4e41f1 678 Pfam PF00593 TonB dependent receptor 269 676 1.0E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_II1128 7340210f8654ed60febc4725bd4e41f1 678 Gene3D G3DSA:2.40.170.20 174 678 3.0E-91 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_II1128 7340210f8654ed60febc4725bd4e41f1 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 6.7E-23 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_II1128 7340210f8654ed60febc4725bd4e41f1 678 SUPERFAMILY SSF56935 29 678 2.17E-121 T 14-10-2018 VS_II1128 7340210f8654ed60febc4725bd4e41f1 678 Gene3D G3DSA:2.170.130.10 48 173 1.2E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_II0695 faac71e5aca647f51b494d4a85a6e2b8 171 SUPERFAMILY SSF55729 3 152 1.23E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0695 faac71e5aca647f51b494d4a85a6e2b8 171 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 7.5E-22 T 14-10-2018 IPR000182 GNAT domain VS_II0695 faac71e5aca647f51b494d4a85a6e2b8 171 Gene3D G3DSA:3.40.630.30 1 160 1.1E-32 T 14-10-2018 VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 106 123 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 Gene3D G3DSA:2.40.50.100 72 150 3.8E-31 T 14-10-2018 VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 SUPERFAMILY SSF51230 75 150 8.77E-26 T 14-10-2018 IPR011053 Single hybrid motif VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 150 9.8E-61 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 Pfam PF00364 Biotin-requiring enzyme 75 149 5.3E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 110 1.1E-17 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 79 92 1.1E-17 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VS_2944 4ddcf1880dac25fa7de428d64b4453f5 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 124 1.1E-17 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Gene3D G3DSA:3.20.20.80 162 577 3.8E-170 T 14-10-2018 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Pfam PF00704 Glycosyl hydrolases family 18 161 575 2.8E-86 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SMART SM00495 794 839 8.5E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SUPERFAMILY SSF49299 596 689 3.02E-7 T 14-10-2018 IPR035986 PKD domain superfamily VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SUPERFAMILY SSF51055 790 841 8.44E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Gene3D G3DSA:2.60.40.10 22 132 4.1E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SUPERFAMILY SSF54556 461 546 2.17E-17 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Gene3D G3DSA:2.60.40.10 597 694 7.5E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Gene3D G3DSA:2.10.10.20 794 837 1.9E-15 T 14-10-2018 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Gene3D G3DSA:2.60.40.10 695 783 8.2E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SMART SM00089 700 786 3.5 T 14-10-2018 IPR022409 PKD/Chitinase domain VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SMART SM00089 62 134 1.6 T 14-10-2018 IPR022409 PKD/Chitinase domain VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SMART SM00089 600 690 0.12 T 14-10-2018 IPR022409 PKD/Chitinase domain VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Pfam PF08329 Chitinase A, N-terminal domain 21 156 1.1E-53 T 14-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SUPERFAMILY SSF51445 135 588 2.11E-88 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 Gene3D G3DSA:3.10.50.10 466 551 3.8E-170 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SMART SM00636 159 575 1.9E-155 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VS_II1414 d17ce15b9208b1d4fef1893f77d4aeb8 846 SUPERFAMILY SSF81296 21 133 8.68E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_2555 7bf1458c147922673a106f8d15f0d428 117 Gene3D G3DSA:2.30.30.790 3 117 1.4E-17 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2555 7bf1458c147922673a106f8d15f0d428 117 Pfam PF01245 Ribosomal protein L19 3 113 1.6E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2555 7bf1458c147922673a106f8d15f0d428 117 SUPERFAMILY SSF50104 2 115 2.01E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VS_2555 7bf1458c147922673a106f8d15f0d428 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.1E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2555 7bf1458c147922673a106f8d15f0d428 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.1E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2555 7bf1458c147922673a106f8d15f0d428 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.1E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2555 7bf1458c147922673a106f8d15f0d428 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.473 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2555 7bf1458c147922673a106f8d15f0d428 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2555 7bf1458c147922673a106f8d15f0d428 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.8E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2555 7bf1458c147922673a106f8d15f0d428 117 PIRSF PIRSF002191 1 117 1.8E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1829 ad4258c4afa4f599b8ac64dfe5bbd839 193 PIRSF PIRSF028788 3 193 9.5E-35 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VS_1829 ad4258c4afa4f599b8ac64dfe5bbd839 193 Gene3D G3DSA:3.30.1460.30 3 101 2.9E-16 T 14-10-2018 VS_1829 ad4258c4afa4f599b8ac64dfe5bbd839 193 SUPERFAMILY SSF159894 4 100 2.62E-26 T 14-10-2018 VS_1829 ad4258c4afa4f599b8ac64dfe5bbd839 193 Pfam PF04994 TfoX C-terminal domain 112 190 1.2E-27 T 14-10-2018 IPR007077 TfoX, C-terminal VS_1829 ad4258c4afa4f599b8ac64dfe5bbd839 193 Pfam PF04993 TfoX N-terminal domain 9 98 1.4E-22 T 14-10-2018 IPR007076 TfoX, N-terminal VS_1829 ad4258c4afa4f599b8ac64dfe5bbd839 193 Gene3D G3DSA:1.10.150.20 111 193 3.5E-17 T 14-10-2018 VS_II0323 daaa0bc2c743ad2ba4535c573c073db2 521 Gene3D G3DSA:1.10.260.40 27 111 3.1E-14 T 14-10-2018 VS_II0323 daaa0bc2c743ad2ba4535c573c073db2 521 Pfam PF06114 IrrE N-terminal-like domain 226 341 1.1E-4 T 14-10-2018 IPR010359 IrrE N-terminal-like domain VS_II0323 daaa0bc2c743ad2ba4535c573c073db2 521 SMART SM00530 33 95 3.1E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II0323 daaa0bc2c743ad2ba4535c573c073db2 521 Pfam PF12268 Protein of unknown function (DUF3612) 342 516 2.1E-103 T 14-10-2018 IPR022055 Protein of unknown function DUF3612 VS_II0323 daaa0bc2c743ad2ba4535c573c073db2 521 Pfam PF01381 Helix-turn-helix 34 95 8.6E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II0323 daaa0bc2c743ad2ba4535c573c073db2 521 SUPERFAMILY SSF47413 28 101 8.73E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II0068 1a8114a294a41c462e11934154f333c2 128 Pfam PF06339 Ectoine synthase 1 127 9.9E-61 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VS_II0068 1a8114a294a41c462e11934154f333c2 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 4.0E-56 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VS_II0068 1a8114a294a41c462e11934154f333c2 128 SUPERFAMILY SSF51182 11 127 5.94E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II0068 1a8114a294a41c462e11934154f333c2 128 Gene3D G3DSA:2.60.120.10 1 116 1.4E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II0068 1a8114a294a41c462e11934154f333c2 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 38.739 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VS_1035 568ce959d53c74b33c634959a0d8eff5 203 SUPERFAMILY SSF56925 37 203 1.39E-16 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_1035 568ce959d53c74b33c634959a0d8eff5 203 Gene3D G3DSA:2.40.160.20 35 203 8.8E-9 T 14-10-2018 VS_II0939 ff917646510530369b0b289228951d66 104 Gene3D G3DSA:1.10.10.10 1 102 5.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0939 ff917646510530369b0b289228951d66 104 SUPERFAMILY SSF46894 4 99 2.52E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0939 ff917646510530369b0b289228951d66 104 SMART SM00862 24 99 1.0E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0939 ff917646510530369b0b289228951d66 104 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 99 9.9E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0212 f1ac9ae2bb63f5d928fc99ff89003848 347 Pfam PF00092 von Willebrand factor type A domain 111 303 6.4E-34 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_II0212 f1ac9ae2bb63f5d928fc99ff89003848 347 SUPERFAMILY SSF53300 107 306 1.34E-37 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0212 f1ac9ae2bb63f5d928fc99ff89003848 347 Gene3D G3DSA:3.40.50.410 108 310 1.1E-59 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0212 f1ac9ae2bb63f5d928fc99ff89003848 347 SMART SM00327 109 310 4.9E-20 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_2328 78000b78d8b384dc4a8ee762013c3ec1 262 SUPERFAMILY SSF53335 74 213 2.21E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2328 78000b78d8b384dc4a8ee762013c3ec1 262 Pfam PF08241 Methyltransferase domain 72 126 4.7E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VS_2328 78000b78d8b384dc4a8ee762013c3ec1 262 Gene3D G3DSA:3.40.50.150 54 215 3.2E-15 T 14-10-2018 VS_1732 0236efe8d447a9eef9c71f0d63483542 207 SUPERFAMILY SSF81342 2 172 2.28E-32 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VS_1732 0236efe8d447a9eef9c71f0d63483542 207 Pfam PF01292 Prokaryotic cytochrome b561 4 170 1.7E-20 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VS_1732 0236efe8d447a9eef9c71f0d63483542 207 Gene3D G3DSA:1.20.950.20 1 159 6.0E-15 T 14-10-2018 VS_II1321 da389060e294bcce770a4a349beeef78 387 Gene3D G3DSA:1.10.441.10 146 298 3.1E-128 T 14-10-2018 VS_II1321 da389060e294bcce770a4a349beeef78 387 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 122 130 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 Gene3D G3DSA:2.60.120.10 299 377 3.1E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1321 da389060e294bcce770a4a349beeef78 387 PIRSF PIRSF001480 1 387 9.4E-102 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 378 4.1E-91 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 Gene3D G3DSA:2.60.120.10 3 273 3.1E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1321 da389060e294bcce770a4a349beeef78 387 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 253 278 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 1 19 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 122 145 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 234 253 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 253 272 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 272 291 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 218 233 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 77 98 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 PRINTS PR00714 Phosphomannose isomerase type I signature 29 44 1.3E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II1321 da389060e294bcce770a4a349beeef78 387 SUPERFAMILY SSF51182 1 372 4.3E-99 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II1321 da389060e294bcce770a4a349beeef78 387 Pfam PF01238 Phosphomannose isomerase type I 2 351 8.4E-85 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_2043 69356cf741792ebb4314305c58ddc17a 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 7.3E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VS_2043 69356cf741792ebb4314305c58ddc17a 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 236 411 6.3E-33 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2043 69356cf741792ebb4314305c58ddc17a 435 Gene3D G3DSA:3.30.930.10 107 435 8.4E-113 T 14-10-2018 VS_2043 69356cf741792ebb4314305c58ddc17a 435 PIRSF PIRSF001529 1 435 9.0E-184 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.725 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 SUPERFAMILY SSF46589 1 114 5.23E-28 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VS_2043 69356cf741792ebb4314305c58ddc17a 435 Gene3D G3DSA:1.10.287.40 1 106 3.0E-19 T 14-10-2018 VS_2043 69356cf741792ebb4314305c58ddc17a 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.4E-171 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VS_2043 69356cf741792ebb4314305c58ddc17a 435 SUPERFAMILY SSF55681 118 433 1.71E-99 T 14-10-2018 VS_II1210 54e526947633021ec270bc61c5cd2382 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.0E-21 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VS_II1210 54e526947633021ec270bc61c5cd2382 200 SMART SM00702 11 187 6.9E-35 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VS_II1210 54e526947633021ec270bc61c5cd2382 200 Gene3D G3DSA:2.60.120.620 1 189 1.1E-52 T 14-10-2018 VS_II1361 f8535bde14c75b6a4c2cd9fbd586de19 427 Pfam PF07690 Major Facilitator Superfamily 22 380 3.1E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1361 f8535bde14c75b6a4c2cd9fbd586de19 427 Gene3D G3DSA:1.20.1250.20 14 424 1.1E-30 T 14-10-2018 VS_II1361 f8535bde14c75b6a4c2cd9fbd586de19 427 SUPERFAMILY SSF103473 17 424 3.66E-38 T 14-10-2018 IPR036259 MFS transporter superfamily VS_0464 4c868631660bb88f037e3116d5f74283 281 Pfam PF03466 LysR substrate binding domain 91 276 4.6E-14 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0464 4c868631660bb88f037e3116d5f74283 281 SUPERFAMILY SSF53850 90 279 1.01E-18 T 14-10-2018 VS_0464 4c868631660bb88f037e3116d5f74283 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 59 1.5E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0464 4c868631660bb88f037e3116d5f74283 281 Gene3D G3DSA:1.10.10.10 4 68 8.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0464 4c868631660bb88f037e3116d5f74283 281 SUPERFAMILY SSF46785 4 86 1.43E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0464 4c868631660bb88f037e3116d5f74283 281 Gene3D G3DSA:3.40.190.290 82 275 2.4E-8 T 14-10-2018 VS_II0833 a0237a6ed54b3735bd29832565d2a262 460 PIRSF PIRSF006603 12 457 2.6E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0833 a0237a6ed54b3735bd29832565d2a262 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 424 3.8E-99 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0833 a0237a6ed54b3735bd29832565d2a262 460 Pfam PF01554 MatE 21 180 4.4E-33 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0833 a0237a6ed54b3735bd29832565d2a262 460 Pfam PF01554 MatE 246 406 1.7E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1518 2c9fe19394dcd43b654b9d25c7b73997 292 Pfam PF14743 DNA ligase OB-like domain 225 287 7.1E-26 T 14-10-2018 IPR029319 DNA ligase, OB-like domain VS_1518 2c9fe19394dcd43b654b9d25c7b73997 292 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 187 210 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 VS_1518 2c9fe19394dcd43b654b9d25c7b73997 292 Gene3D G3DSA:3.30.470.30 63 163 2.3E-52 T 14-10-2018 VS_1518 2c9fe19394dcd43b654b9d25c7b73997 292 SUPERFAMILY SSF50249 184 288 5.71E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1518 2c9fe19394dcd43b654b9d25c7b73997 292 Gene3D G3DSA:3.30.1490.70 43 202 2.3E-52 T 14-10-2018 VS_1518 2c9fe19394dcd43b654b9d25c7b73997 292 Gene3D G3DSA:2.40.50.140 210 291 3.9E-6 T 14-10-2018 VS_1518 2c9fe19394dcd43b654b9d25c7b73997 292 SUPERFAMILY SSF56091 43 210 2.67E-35 T 14-10-2018 VS_II1407 04c24adf6848ea397fc9f77ad9afb492 972 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 389 653 9.0E-10 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VS_II1407 04c24adf6848ea397fc9f77ad9afb492 972 SUPERFAMILY SSF53649 388 659 1.18E-9 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_II1507 7e822551d73fed799e5a3db54c7033c4 370 SUPERFAMILY SSF140931 99 297 3.53E-37 T 14-10-2018 IPR036597 Fido-like domain superfamily VS_II1507 7e822551d73fed799e5a3db54c7033c4 370 Pfam PF13776 Domain of unknown function (DUF4172) 6 86 1.0E-29 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 VS_II1507 7e822551d73fed799e5a3db54c7033c4 370 Gene3D G3DSA:1.10.3290.10 40 296 4.7E-43 T 14-10-2018 IPR036597 Fido-like domain superfamily VS_II1507 7e822551d73fed799e5a3db54c7033c4 370 Pfam PF02661 Fic/DOC family 115 227 1.9E-14 T 14-10-2018 IPR003812 Fido domain VS_2775 b89e61ec217601a15e2b7924a5c84c89 570 Gene3D G3DSA:3.10.20.310 97 184 1.8E-28 T 14-10-2018 VS_2775 b89e61ec217601a15e2b7924a5c84c89 570 Pfam PF17243 POTRA domain TamA domain 1 25 95 1.9E-20 T 14-10-2018 IPR035243 TamA, POTRA domain 1 VS_2775 b89e61ec217601a15e2b7924a5c84c89 570 Gene3D G3DSA:3.10.20.310 20 96 1.1E-23 T 14-10-2018 VS_2775 b89e61ec217601a15e2b7924a5c84c89 570 Pfam PF01103 Surface antigen 274 567 3.7E-30 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VS_2775 b89e61ec217601a15e2b7924a5c84c89 570 Gene3D G3DSA:3.10.20.310 185 261 2.6E-19 T 14-10-2018 VS_2775 b89e61ec217601a15e2b7924a5c84c89 570 Gene3D G3DSA:2.40.160.50 262 570 3.0E-101 T 14-10-2018 VS_2358 a86d8f07fd708ad850876c38fa1841d9 104 SUPERFAMILY SSF158452 1 103 3.4E-34 T 14-10-2018 IPR036814 YqcC-like superfamily VS_2358 a86d8f07fd708ad850876c38fa1841d9 104 Pfam PF04287 tRNA pseudouridine synthase C 10 101 7.9E-32 T 14-10-2018 IPR023376 YqcC-like domain VS_2358 a86d8f07fd708ad850876c38fa1841d9 104 Gene3D G3DSA:1.20.1440.40 1 104 2.6E-31 T 14-10-2018 IPR036814 YqcC-like superfamily VS_2358 a86d8f07fd708ad850876c38fa1841d9 104 PIRSF PIRSF006257 1 104 2.4E-36 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 VS_1914 cd9e54bf387152df3cd9152bc55a5d75 366 PIRSF PIRSF039026 8 366 1.2E-142 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VS_1914 cd9e54bf387152df3cd9152bc55a5d75 366 Gene3D G3DSA:3.40.190.170 42 352 1.1E-116 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VS_1914 cd9e54bf387152df3cd9152bc55a5d75 366 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 44 331 1.6E-72 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VS_1914 cd9e54bf387152df3cd9152bc55a5d75 366 Gene3D G3DSA:3.40.190.10 160 331 1.1E-116 T 14-10-2018 VS_2044 45540530ace0519b9e7d6d4b2517f126 451 Gene3D G3DSA:1.10.3710.10 349 450 3.5E-36 T 14-10-2018 VS_2044 45540530ace0519b9e7d6d4b2517f126 451 Gene3D G3DSA:1.10.8.60 168 243 3.4E-23 T 14-10-2018 VS_2044 45540530ace0519b9e7d6d4b2517f126 451 Pfam PF12002 MgsA AAA+ ATPase C terminal 271 437 5.3E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VS_2044 45540530ace0519b9e7d6d4b2517f126 451 SUPERFAMILY SSF48019 255 437 9.64E-73 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VS_2044 45540530ace0519b9e7d6d4b2517f126 451 Gene3D G3DSA:3.40.50.300 4 167 3.3E-48 T 14-10-2018 VS_2044 45540530ace0519b9e7d6d4b2517f126 451 Pfam PF16193 AAA C-terminal domain 196 270 2.6E-20 T 14-10-2018 IPR032423 AAA C-terminal domain VS_2044 45540530ace0519b9e7d6d4b2517f126 451 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 161 1.1E-16 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_2044 45540530ace0519b9e7d6d4b2517f126 451 SMART SM00382 52 168 3.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2044 45540530ace0519b9e7d6d4b2517f126 451 Gene3D G3DSA:1.20.272.10 244 348 5.9E-44 T 14-10-2018 VS_2044 45540530ace0519b9e7d6d4b2517f126 451 SUPERFAMILY SSF52540 12 237 3.49E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0026 d83dd44286047ed70957dedb0386af76 616 SUPERFAMILY SSF52540 350 601 2.15E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0026 d83dd44286047ed70957dedb0386af76 616 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0026 d83dd44286047ed70957dedb0386af76 616 SUPERFAMILY SSF90123 29 346 1.7E-52 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0026 d83dd44286047ed70957dedb0386af76 616 Gene3D G3DSA:1.20.1560.10 10 332 2.7E-27 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0026 d83dd44286047ed70957dedb0386af76 616 Gene3D G3DSA:3.40.50.300 352 604 1.1E-91 T 14-10-2018 VS_II0026 d83dd44286047ed70957dedb0386af76 616 SMART SM00382 386 577 7.1E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0026 d83dd44286047ed70957dedb0386af76 616 Pfam PF00005 ABC transporter 378 531 2.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0026 d83dd44286047ed70957dedb0386af76 616 Pfam PF00664 ABC transporter transmembrane region 39 308 4.3E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0888 ca42cc884f88e1dfea031df0d2c1d626 216 Pfam PF01810 LysE type translocator 19 209 8.2E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_2294 688096c544e416b8cd790a087a6afaf7 377 SUPERFAMILY SSF64518 1 376 1.31E-94 T 14-10-2018 VS_2294 688096c544e416b8cd790a087a6afaf7 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.2E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_2294 688096c544e416b8cd790a087a6afaf7 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 9.0E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_2294 688096c544e416b8cd790a087a6afaf7 377 PRINTS PR00207 Flagellin signature 37 54 2.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_2294 688096c544e416b8cd790a087a6afaf7 377 PRINTS PR00207 Flagellin signature 111 134 2.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_2294 688096c544e416b8cd790a087a6afaf7 377 PRINTS PR00207 Flagellin signature 76 95 2.4E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_2294 688096c544e416b8cd790a087a6afaf7 377 Gene3D G3DSA:1.10.8.410 328 376 3.1E-18 T 14-10-2018 VS_2294 688096c544e416b8cd790a087a6afaf7 377 Pfam PF07196 Flagellin hook IN motif 209 245 3.0E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VS_2294 688096c544e416b8cd790a087a6afaf7 377 Gene3D G3DSA:3.30.70.2120 172 275 2.3E-75 T 14-10-2018 VS_2294 688096c544e416b8cd790a087a6afaf7 377 Gene3D G3DSA:1.20.1330.10 44 327 2.3E-75 T 14-10-2018 VS_0241 0273c43abd9810e615f5ff7b24c290d0 471 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 302 468 3.6E-38 T 14-10-2018 IPR000160 GGDEF domain VS_0241 0273c43abd9810e615f5ff7b24c290d0 471 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 465 3.4E-31 T 14-10-2018 IPR000160 GGDEF domain VS_0241 0273c43abd9810e615f5ff7b24c290d0 471 Gene3D G3DSA:3.30.70.270 294 469 2.6E-42 T 14-10-2018 VS_0241 0273c43abd9810e615f5ff7b24c290d0 471 SUPERFAMILY SSF55073 311 468 7.3E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VS_0241 0273c43abd9810e615f5ff7b24c290d0 471 SMART SM00267 295 469 8.4E-39 T 14-10-2018 IPR000160 GGDEF domain VS_0241 0273c43abd9810e615f5ff7b24c290d0 471 Gene3D G3DSA:3.30.450.20 103 208 7.4E-7 T 14-10-2018 VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 Gene3D G3DSA:3.40.50.2300 2 129 1.3E-36 T 14-10-2018 VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 Pfam PF00072 Response regulator receiver domain 13 121 1.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 SMART SM00862 163 239 3.6E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 Gene3D G3DSA:1.10.10.10 130 243 2.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 SMART SM00448 10 121 4.3E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 3.2E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 SUPERFAMILY SSF52172 9 138 1.71E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0575 052a36c45b40a3d499b1c8cc9ee8911e 243 SUPERFAMILY SSF46894 140 240 2.49E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_0554 ae73e29c17bf98a51b43cc15ba2a6e7c 173 SUPERFAMILY SSF52972 2 171 3.58E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_0554 ae73e29c17bf98a51b43cc15ba2a6e7c 173 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 170 4.9E-45 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase VS_0554 ae73e29c17bf98a51b43cc15ba2a6e7c 173 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 30.875 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase VS_0554 ae73e29c17bf98a51b43cc15ba2a6e7c 173 Gene3D G3DSA:3.90.950.10 1 173 3.0E-68 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VS_0554 ae73e29c17bf98a51b43cc15ba2a6e7c 173 Pfam PF01931 Protein of unknown function DUF84 7 166 3.4E-58 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VS_1905 8f206dd09a812d4667d907fec843cbb1 410 Gene3D G3DSA:3.40.640.10 39 300 2.0E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1905 8f206dd09a812d4667d907fec843cbb1 410 PIRSF PIRSF005572 25 410 4.0E-56 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VS_1905 8f206dd09a812d4667d907fec843cbb1 410 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 220 239 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VS_1905 8f206dd09a812d4667d907fec843cbb1 410 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 13 409 2.3E-168 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VS_1905 8f206dd09a812d4667d907fec843cbb1 410 Pfam PF00266 Aminotransferase class-V 28 398 4.9E-145 T 14-10-2018 IPR000192 Aminotransferase class V domain VS_1905 8f206dd09a812d4667d907fec843cbb1 410 SUPERFAMILY SSF53383 13 406 1.85E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1905 8f206dd09a812d4667d907fec843cbb1 410 Gene3D G3DSA:3.90.1150.10 13 402 2.0E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 Pfam PF00570 HRDC domain 238 303 2.1E-10 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 Gene3D G3DSA:1.10.150.80 220 318 5.0E-20 T 14-10-2018 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 SUPERFAMILY SSF53098 25 234 1.71E-69 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 Gene3D G3DSA:1.10.150.80 319 397 2.8E-26 T 14-10-2018 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 TIGRFAM TIGR01388 rnd: ribonuclease D 30 394 1.4E-146 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 SUPERFAMILY SSF47819 321 396 1.96E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 Pfam PF01612 3'-5' exonuclease 28 195 2.9E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 Hamap MF_01899 Ribonuclease D [rnd]. 28 397 45.354 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 SMART SM00474 28 196 4.0E-43 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 Gene3D G3DSA:3.30.420.10 26 219 4.8E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2219 fb7e3b2c162a4b7d6872e7e5c2cc7f44 397 SUPERFAMILY SSF47819 219 326 5.23E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 Gene3D G3DSA:1.10.10.60 179 232 2.1E-11 T 14-10-2018 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 Pfam PF12833 Helix-turn-helix domain 202 279 4.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 SMART SM00342 196 278 2.2E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 SUPERFAMILY SSF51215 37 162 5.23E-20 T 14-10-2018 IPR037923 Transcription regulator HTH-like VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 5.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 5.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 274 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 SUPERFAMILY SSF46689 180 230 6.27E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 Pfam PF02311 AraC-like ligand binding domain 25 156 1.7E-26 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 SUPERFAMILY SSF46689 233 279 1.16E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2159 d51c18364ab77b5f028b6a68f25b32ee 281 Gene3D G3DSA:1.10.10.60 233 281 2.3E-15 T 14-10-2018 VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 SMART SM00387 325 428 1.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 SMART SM00388 214 280 1.7E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 SUPERFAMILY SSF158472 161 209 6.15E-6 T 14-10-2018 VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 SUPERFAMILY SSF47384 197 281 3.73E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 413 4.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 280 1.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 Gene3D G3DSA:3.30.565.10 283 428 7.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 Gene3D G3DSA:1.10.287.130 221 282 1.5E-6 T 14-10-2018 VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 SUPERFAMILY SSF55874 269 425 1.28E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1474 a98094f39937ee9aff9c6bbc3619886a 428 Gene3D G3DSA:1.20.1480.50 126 219 8.9E-6 T 14-10-2018 VS_1499 39b2362f2a0aeb239625514dd6cac7e1 268 Gene3D G3DSA:3.40.190.10 104 216 7.4E-99 T 14-10-2018 VS_1499 39b2362f2a0aeb239625514dd6cac7e1 268 Pfam PF12849 PBP superfamily domain 26 245 3.0E-32 T 14-10-2018 IPR024370 PBP domain VS_1499 39b2362f2a0aeb239625514dd6cac7e1 268 Gene3D G3DSA:3.40.190.10 29 253 7.4E-99 T 14-10-2018 VS_1499 39b2362f2a0aeb239625514dd6cac7e1 268 SUPERFAMILY SSF53850 27 255 1.14E-33 T 14-10-2018 VS_II1145 6cc74b82a88c0f5dcc24f822b7a44875 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VS_II1145 6cc74b82a88c0f5dcc24f822b7a44875 147 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 5.4E-24 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VS_II1145 6cc74b82a88c0f5dcc24f822b7a44875 147 SUPERFAMILY SSF53927 8 139 3.23E-29 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_II1145 6cc74b82a88c0f5dcc24f822b7a44875 147 Gene3D G3DSA:3.40.140.10 2 144 1.9E-38 T 14-10-2018 VS_II1145 6cc74b82a88c0f5dcc24f822b7a44875 147 PIRSF PIRSF006019 1 145 5.7E-44 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VS_II0607 2e9501dee2e1e29c1ba7b56ba4c9bd3e 388 Pfam PF02595 Glycerate kinase family 3 378 5.3E-134 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VS_II0607 2e9501dee2e1e29c1ba7b56ba4c9bd3e 388 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 380 5.9E-135 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VS_II0607 2e9501dee2e1e29c1ba7b56ba4c9bd3e 388 PIRSF PIRSF006078 1 383 1.1E-127 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VS_II0607 2e9501dee2e1e29c1ba7b56ba4c9bd3e 388 Gene3D G3DSA:3.90.1510.10 42 282 4.9E-128 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VS_II0607 2e9501dee2e1e29c1ba7b56ba4c9bd3e 388 Gene3D G3DSA:3.40.50.10350 1 367 4.9E-128 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VS_II0607 2e9501dee2e1e29c1ba7b56ba4c9bd3e 388 SUPERFAMILY SSF110738 1 380 5.49E-123 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VS_II0903 6db226f935cbf4dcbb7c3fd0d7809bbf 333 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 19 324 1.6E-70 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 VS_II0903 6db226f935cbf4dcbb7c3fd0d7809bbf 333 SUPERFAMILY SSF51556 6 327 3.17E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_II0903 6db226f935cbf4dcbb7c3fd0d7809bbf 333 Gene3D G3DSA:3.20.20.140 1 328 1.5E-91 T 14-10-2018 VS_2616 e41837989e45baeabd54362381ff60cd 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.8E-98 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VS_2616 e41837989e45baeabd54362381ff60cd 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 131.42 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VS_2616 e41837989e45baeabd54362381ff60cd 245 Gene3D G3DSA:3.20.20.70 1 245 4.5E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2616 e41837989e45baeabd54362381ff60cd 245 SUPERFAMILY SSF63892 4 241 5.75E-101 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VS_2616 e41837989e45baeabd54362381ff60cd 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.4E-105 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VS_0238 b2315d35819e59d3861efb78368d7083 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.6E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 PRINTS PR00297 10kDa chaperonin signature 82 95 4.6E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.6E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.6E-25 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 Gene3D G3DSA:2.30.33.40 1 96 2.1E-33 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 SUPERFAMILY SSF50129 1 96 4.0E-29 T 14-10-2018 IPR011032 GroES-like superfamily VS_0238 b2315d35819e59d3861efb78368d7083 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.177 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 SMART SM00883 2 95 7.5E-46 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VS_0238 b2315d35819e59d3861efb78368d7083 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.2E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 Gene3D G3DSA:2.40.50.100 68 196 8.9E-72 T 14-10-2018 VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 Pfam PF00529 HlyD membrane-fusion protein of T1SS 270 339 3.3E-7 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 Gene3D G3DSA:2.40.30.170 58 279 8.9E-72 T 14-10-2018 VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 Gene3D G3DSA:2.40.420.20 280 351 8.9E-72 T 14-10-2018 VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 269 2.9E-24 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 Gene3D G3DSA:1.10.287.470 103 162 8.9E-72 T 14-10-2018 VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 SUPERFAMILY SSF111369 58 273 3.01E-39 T 14-10-2018 VS_0064 6821271d876aa34b7b5fc835628aaf6c 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 4.1E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II0986 9c3cb7cd790251b2bf89552b6b1481d7 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 1.5E-139 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VS_II0986 9c3cb7cd790251b2bf89552b6b1481d7 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 2.1E-152 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VS_2908 32678fb2fab80a65d6c26517e8c46299 115 Pfam PF11333 Protein of unknown function (DUF3135) 10 89 1.3E-33 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 VS_II0275 d157da9ef99e6286c311cc0d861eb8a7 276 SUPERFAMILY SSF52402 2 276 8.13E-79 T 14-10-2018 VS_II0275 d157da9ef99e6286c311cc0d861eb8a7 276 Pfam PF02540 NAD synthase 21 270 7.0E-64 T 14-10-2018 IPR022310 NAD/GMP synthase VS_II0275 d157da9ef99e6286c311cc0d861eb8a7 276 Gene3D G3DSA:3.40.50.620 1 276 1.0E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_II0275 d157da9ef99e6286c311cc0d861eb8a7 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 45.562 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VS_II0275 d157da9ef99e6286c311cc0d861eb8a7 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 26 272 4.3E-66 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 VS_II1029 d8289612bce9a2ae46db1b93fed4cd89 489 Pfam PF07690 Major Facilitator Superfamily 22 216 2.5E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1029 d8289612bce9a2ae46db1b93fed4cd89 489 Pfam PF07690 Major Facilitator Superfamily 302 470 3.6E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1029 d8289612bce9a2ae46db1b93fed4cd89 489 Gene3D G3DSA:1.20.1250.20 8 194 2.3E-39 T 14-10-2018 VS_II1029 d8289612bce9a2ae46db1b93fed4cd89 489 ProSitePatterns PS00216 Sugar transport proteins signature 1. 349 366 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VS_II1029 d8289612bce9a2ae46db1b93fed4cd89 489 TIGRFAM TIGR00886 2A0108: nitrite transporter 16 433 8.5E-100 T 14-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 VS_II1029 d8289612bce9a2ae46db1b93fed4cd89 489 Gene3D G3DSA:1.20.1250.20 287 477 2.0E-39 T 14-10-2018 VS_II1029 d8289612bce9a2ae46db1b93fed4cd89 489 SUPERFAMILY SSF103473 10 466 2.62E-58 T 14-10-2018 IPR036259 MFS transporter superfamily VS_2081 5787e7d3d1e285aa21b4f89fc323a5c8 388 SUPERFAMILY SSF52980 1 382 2.86E-122 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VS_2081 5787e7d3d1e285aa21b4f89fc323a5c8 388 Gene3D G3DSA:3.40.50.10770 1 140 5.4E-61 T 14-10-2018 VS_2081 5787e7d3d1e285aa21b4f89fc323a5c8 388 Gene3D G3DSA:3.40.1350.10 251 376 6.6E-77 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VS_2081 5787e7d3d1e285aa21b4f89fc323a5c8 388 Gene3D G3DSA:1.10.10.680 169 250 6.6E-77 T 14-10-2018 VS_2081 5787e7d3d1e285aa21b4f89fc323a5c8 388 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.6E-175 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 VS_II0400 1e91292deaa8a22f1f80f25703ca4192 473 Pfam PF01266 FAD dependent oxidoreductase 37 399 1.8E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VS_II0400 1e91292deaa8a22f1f80f25703ca4192 473 SUPERFAMILY SSF51905 28 311 1.38E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0400 1e91292deaa8a22f1f80f25703ca4192 473 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 6 470 3.8E-224 T 14-10-2018 IPR017715 Putative aminophosphonate oxidoreductase VS_II0400 1e91292deaa8a22f1f80f25703ca4192 473 Gene3D G3DSA:3.50.50.60 37 401 3.1E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0400 1e91292deaa8a22f1f80f25703ca4192 473 Gene3D G3DSA:3.30.9.10 131 360 3.1E-58 T 14-10-2018 VS_II0247 5a4f4612a0d6937b7f855858650b8e4c 237 Pfam PF00005 ABC transporter 25 175 1.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0247 5a4f4612a0d6937b7f855858650b8e4c 237 Gene3D G3DSA:3.40.50.300 4 234 5.5E-59 T 14-10-2018 VS_II0247 5a4f4612a0d6937b7f855858650b8e4c 237 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0247 5a4f4612a0d6937b7f855858650b8e4c 237 SMART SM00382 34 236 5.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0247 5a4f4612a0d6937b7f855858650b8e4c 237 SUPERFAMILY SSF52540 6 227 1.3E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0927 b510a05436ea57aaadb56a7ac2834d86 298 Gene3D G3DSA:3.40.190.290 96 292 6.8E-12 T 14-10-2018 VS_II0927 b510a05436ea57aaadb56a7ac2834d86 298 SUPERFAMILY SSF46785 5 86 1.7E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0927 b510a05436ea57aaadb56a7ac2834d86 298 SUPERFAMILY SSF53850 99 293 6.15E-10 T 14-10-2018 VS_II0927 b510a05436ea57aaadb56a7ac2834d86 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0927 b510a05436ea57aaadb56a7ac2834d86 298 Gene3D G3DSA:1.10.10.10 4 95 3.7E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0513 4da63fbc3dc674c6aadad472d632d346 259 Gene3D G3DSA:3.10.450.70 42 97 1.5E-15 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VS_0513 4da63fbc3dc674c6aadad472d632d346 259 SUPERFAMILY SSF52833 120 259 1.15E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0513 4da63fbc3dc674c6aadad472d632d346 259 Pfam PF13098 Thioredoxin-like domain 129 257 1.7E-24 T 14-10-2018 IPR012336 Thioredoxin-like fold VS_0513 4da63fbc3dc674c6aadad472d632d346 259 SUPERFAMILY SSF54423 43 99 1.31E-12 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VS_0513 4da63fbc3dc674c6aadad472d632d346 259 Gene3D G3DSA:3.40.30.10 98 259 3.0E-42 T 14-10-2018 VS_0513 4da63fbc3dc674c6aadad472d632d346 259 Pfam PF10411 Disulfide bond isomerase protein N-terminus 44 97 7.5E-14 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VS_2965 4a271c56be49198b098f49c91066a027 177 ProSitePatterns PS01109 Ribosomal protein L10 signature. 21 55 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2965 4a271c56be49198b098f49c91066a027 177 Gene3D G3DSA:3.30.70.1730 14 137 2.7E-35 T 14-10-2018 VS_2965 4a271c56be49198b098f49c91066a027 177 SUPERFAMILY SSF160369 17 171 2.88E-45 T 14-10-2018 VS_2965 4a271c56be49198b098f49c91066a027 177 Pfam PF00466 Ribosomal protein L10 18 114 4.4E-27 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VS_2965 4a271c56be49198b098f49c91066a027 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 16 172 24.464 T 14-10-2018 IPR022973 Ribosomal protein L10 VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 SUPERFAMILY SSF46894 146 211 5.78E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 Gene3D G3DSA:3.40.50.2300 18 143 4.5E-24 T 14-10-2018 VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 SMART SM00421 152 209 1.0E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 Gene3D G3DSA:1.10.10.10 145 215 6.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0322 6502a5be1cd98c5747ba27203208a4ad 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 3.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0069 b255577570e8120e2191c30bd5857c52 474 Gene3D G3DSA:3.40.1160.10 3 308 3.4E-56 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_II0069 b255577570e8120e2191c30bd5857c52 474 Gene3D G3DSA:3.30.2130.10 311 466 1.4E-11 T 14-10-2018 VS_II0069 b255577570e8120e2191c30bd5857c52 474 Pfam PF00696 Amino acid kinase family 4 293 9.4E-20 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_II0069 b255577570e8120e2191c30bd5857c52 474 SUPERFAMILY SSF53633 5 307 1.8E-53 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_II0069 b255577570e8120e2191c30bd5857c52 474 SUPERFAMILY SSF55021 398 464 7.63E-9 T 14-10-2018 VS_II1139 f78c7adbf304e79414f4a581473f5512 268 Gene3D G3DSA:1.10.10.60 159 266 2.4E-30 T 14-10-2018 VS_II1139 f78c7adbf304e79414f4a581473f5512 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 1.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1139 f78c7adbf304e79414f4a581473f5512 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 1.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1139 f78c7adbf304e79414f4a581473f5512 268 Pfam PF12833 Helix-turn-helix domain 185 261 1.9E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1139 f78c7adbf304e79414f4a581473f5512 268 SUPERFAMILY SSF46689 215 262 8.66E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1139 f78c7adbf304e79414f4a581473f5512 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 212 257 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II1139 f78c7adbf304e79414f4a581473f5512 268 SMART SM00342 179 261 2.5E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_1840 6fdb6325725e2d6d648deb87328837af 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 65 173 3.6E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VS_1840 6fdb6325725e2d6d648deb87328837af 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 1.3E-111 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VS_1840 6fdb6325725e2d6d648deb87328837af 760 Gene3D G3DSA:2.40.110.10 177 300 5.6E-89 T 14-10-2018 VS_1840 6fdb6325725e2d6d648deb87328837af 760 Gene3D G3DSA:1.10.540.10 63 176 5.6E-89 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VS_1840 6fdb6325725e2d6d648deb87328837af 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 446 1.1E-9 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VS_1840 6fdb6325725e2d6d648deb87328837af 760 SUPERFAMILY SSF47203 301 453 4.03E-20 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VS_1840 6fdb6325725e2d6d648deb87328837af 760 SUPERFAMILY SSF56645 60 296 1.57E-44 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VS_1840 6fdb6325725e2d6d648deb87328837af 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 2.3E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VS_1840 6fdb6325725e2d6d648deb87328837af 760 Gene3D G3DSA:1.20.140.10 301 446 5.6E-89 T 14-10-2018 VS_1794 c156845435075feb86bf731965089df8 375 Pfam PF05128 Domain of unknown function (DUF697) 211 371 1.4E-50 T 14-10-2018 IPR021147 Protein of unknown function DUF697 VS_1794 c156845435075feb86bf731965089df8 375 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 94 370 5.2E-77 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 VS_0502 09df5eb7d0b7a7fd7cf2255faa1d3d2f 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 4.0E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VS_0502 09df5eb7d0b7a7fd7cf2255faa1d3d2f 183 Gene3D G3DSA:1.20.120.520 1 153 9.6E-19 T 14-10-2018 VS_2818 ed14180aa4dc7c0e1707d463bbc53db1 177 ProSitePatterns PS00527 Ribosomal protein S14 signature. 139 161 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2818 ed14180aa4dc7c0e1707d463bbc53db1 177 SUPERFAMILY SSF57716 78 177 1.57E-35 T 14-10-2018 VS_2818 ed14180aa4dc7c0e1707d463bbc53db1 177 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 77 177 25.501 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VS_2818 ed14180aa4dc7c0e1707d463bbc53db1 177 Pfam PF00253 Ribosomal protein S14p/S29e 123 176 2.5E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2818 ed14180aa4dc7c0e1707d463bbc53db1 177 Gene3D G3DSA:4.10.830.10 117 177 3.8E-22 T 14-10-2018 VS_0722 ac4e5460b14dc740800b32c04a91735b 153 SUPERFAMILY SSF55486 3 150 3.66E-49 T 14-10-2018 VS_0722 ac4e5460b14dc740800b32c04a91735b 153 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.0E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VS_0722 ac4e5460b14dc740800b32c04a91735b 153 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.733 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VS_0722 ac4e5460b14dc740800b32c04a91735b 153 Pfam PF02130 Uncharacterized protein family UPF0054 19 142 1.5E-39 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VS_0722 ac4e5460b14dc740800b32c04a91735b 153 Gene3D G3DSA:3.40.390.30 1 153 5.9E-61 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VS_0722 ac4e5460b14dc740800b32c04a91735b 153 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 Pfam PF08351 Domain of unknown function (DUF1726) 67 133 1.3E-5 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 Pfam PF05127 Helicase 189 356 3.2E-56 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 Pfam PF13718 GNAT acetyltransferase 2 401 517 7.5E-16 T 14-10-2018 IPR000182 GNAT domain VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 SUPERFAMILY SSF55729 393 565 2.47E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 Gene3D G3DSA:3.40.50.12320 187 347 7.0E-46 T 14-10-2018 VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 Gene3D G3DSA:3.40.50.11040 5 178 6.5E-17 T 14-10-2018 VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 SUPERFAMILY SSF52540 156 295 1.11E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 Gene3D G3DSA:3.40.630.30 361 563 3.2E-67 T 14-10-2018 VS_II0003 4158d567108f89c36e845a3e27bf30fa 710 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 20 707 39.54 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 SUPERFAMILY SSF55874 446 563 3.67E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 SMART SM00387 476 569 3.6E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 Pfam PF07730 Histidine kinase 367 435 5.6E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 Pfam PF00672 HAMP domain 177 222 4.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 565 4.1E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 PIRSF PIRSF003167 3 574 2.7E-168 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 Gene3D G3DSA:3.30.565.10 436 569 4.4E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 SMART SM00304 176 228 5.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 2.8E-21 T 14-10-2018 IPR029095 NarX-like, N-terminal VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 Gene3D G3DSA:1.10.287.130 173 278 2.6E-8 T 14-10-2018 VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 Gene3D G3DSA:1.20.120.960 40 148 8.0E-12 T 14-10-2018 VS_II0601 1f15c2d6c4833c1743c6cbdb1bdebf85 576 SUPERFAMILY SSF158472 178 223 1.57E-8 T 14-10-2018 VS_II0990 372fd50c18d0bd94f703a75b2d8fef57 437 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 2.7E-24 T 14-10-2018 IPR010657 ImpA, N-terminal VS_3036 19551232e33dddbf52bf485deef28166 207 Pfam PF01810 LysE type translocator 17 204 3.6E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_3036 19551232e33dddbf52bf485deef28166 207 PIRSF PIRSF006324 2 207 1.6E-55 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_II0985 2dbf3bbc9efbb3f34aa1cf02a872d173 268 Gene3D G3DSA:1.25.40.590 49 206 3.1E-47 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VS_II0985 2dbf3bbc9efbb3f34aa1cf02a872d173 268 Pfam PF09850 Type VI secretion system protein DotU 52 254 1.3E-49 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VS_II0985 2dbf3bbc9efbb3f34aa1cf02a872d173 268 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 258 8.4E-60 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VS_1261 51489c1c9218181f37fdea5431f83448 566 Gene3D G3DSA:3.40.50.300 290 538 2.7E-27 T 14-10-2018 VS_1261 51489c1c9218181f37fdea5431f83448 566 Pfam PF01926 50S ribosome-binding GTPase 319 437 2.5E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_1261 51489c1c9218181f37fdea5431f83448 566 SUPERFAMILY SSF52540 303 450 8.26E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1568 d203a64db3ec6a98eada9c497377bf4a 219 SUPERFAMILY SSF47616 97 210 9.55E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_1568 d203a64db3ec6a98eada9c497377bf4a 219 Gene3D G3DSA:3.40.30.10 7 78 4.2E-12 T 14-10-2018 VS_1568 d203a64db3ec6a98eada9c497377bf4a 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 82 1.4E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_1568 d203a64db3ec6a98eada9c497377bf4a 219 SUPERFAMILY SSF52833 9 109 1.52E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1568 d203a64db3ec6a98eada9c497377bf4a 219 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 191 8.0E-13 T 14-10-2018 VS_1568 d203a64db3ec6a98eada9c497377bf4a 219 Gene3D G3DSA:1.20.1050.10 79 192 1.5E-13 T 14-10-2018 VS_0684 de194b60cbd17e28927c7e666b927365 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 7.1E-33 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VS_0684 de194b60cbd17e28927c7e666b927365 297 Gene3D G3DSA:1.10.1040.10 167 291 4.1E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VS_0684 de194b60cbd17e28927c7e666b927365 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 9.1E-76 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 VS_0684 de194b60cbd17e28927c7e666b927365 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 5.0E-30 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VS_0684 de194b60cbd17e28927c7e666b927365 297 Gene3D G3DSA:3.40.50.720 1 166 2.9E-50 T 14-10-2018 VS_0684 de194b60cbd17e28927c7e666b927365 297 SUPERFAMILY SSF51735 2 165 8.35E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0684 de194b60cbd17e28927c7e666b927365 297 SUPERFAMILY SSF48179 168 290 2.79E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0747 a93ee2a2ee7e1d0810004aca3186620f 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VS_0747 a93ee2a2ee7e1d0810004aca3186620f 196 Gene3D G3DSA:3.40.50.1470 1 196 2.0E-74 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VS_0747 a93ee2a2ee7e1d0810004aca3186620f 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.447 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VS_0747 a93ee2a2ee7e1d0810004aca3186620f 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VS_0747 a93ee2a2ee7e1d0810004aca3186620f 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 6.4E-67 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VS_0747 a93ee2a2ee7e1d0810004aca3186620f 196 SUPERFAMILY SSF53178 5 194 2.62E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VS_0747 a93ee2a2ee7e1d0810004aca3186620f 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 1.3E-52 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VS_1792 5e033c112f26038230a094873e1880ee 195 Gene3D G3DSA:3.40.630.30 13 191 6.0E-44 T 14-10-2018 VS_1792 5e033c112f26038230a094873e1880ee 195 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 4.8E-19 T 14-10-2018 IPR000182 GNAT domain VS_1792 5e033c112f26038230a094873e1880ee 195 SUPERFAMILY SSF55729 14 185 1.61E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1138 576b3ea76b90db0a6f1b334f1d7d5ce4 318 Gene3D G3DSA:3.90.550.10 1 180 2.7E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1138 576b3ea76b90db0a6f1b334f1d7d5ce4 318 Pfam PF00535 Glycosyl transferase family 2 2 164 1.4E-29 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VS_1138 576b3ea76b90db0a6f1b334f1d7d5ce4 318 SUPERFAMILY SSF53448 1 174 4.81E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1073 a22dd11e3098db4b658b569089526207 106 Gene3D G3DSA:3.30.1390.10 1 106 6.9E-45 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VS_1073 a22dd11e3098db4b658b569089526207 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.837 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VS_1073 a22dd11e3098db4b658b569089526207 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 7.9E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VS_1073 a22dd11e3098db4b658b569089526207 106 SUPERFAMILY SSF54736 21 105 3.56E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VS_II0008 fe039168842c91553d23782b779c999a 463 SUPERFAMILY SSF111369 64 123 1.57E-5 T 14-10-2018 VS_II0008 fe039168842c91553d23782b779c999a 463 Gene3D G3DSA:2.40.50.100 69 103 1.9E-9 T 14-10-2018 VS_II0008 fe039168842c91553d23782b779c999a 463 Pfam PF13533 Biotin-lipoyl like 75 108 3.5E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_II0008 fe039168842c91553d23782b779c999a 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 5.3E-132 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VS_II0008 fe039168842c91553d23782b779c999a 463 Gene3D G3DSA:2.40.30.170 58 68 1.9E-9 T 14-10-2018 VS_II0008 fe039168842c91553d23782b779c999a 463 Pfam PF02321 Outer membrane efflux protein 170 273 9.8E-5 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0008 fe039168842c91553d23782b779c999a 463 SUPERFAMILY SSF56954 171 262 1.57E-5 T 14-10-2018 VS_II0008 fe039168842c91553d23782b779c999a 463 Gene3D G3DSA:1.10.287.470 104 127 1.9E-9 T 14-10-2018 VS_II0008 fe039168842c91553d23782b779c999a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 8.5E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 8.5E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 8.5E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 8.5E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 8.5E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 8.5E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 8.5E-47 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0008 fe039168842c91553d23782b779c999a 463 Pfam PF13437 HlyD family secretion protein 316 428 2.4E-16 T 14-10-2018 VS_II0528 da8e3b1af746cb6fd00bb351332f4b3b 369 SUPERFAMILY SSF46689 319 363 1.15E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0528 da8e3b1af746cb6fd00bb351332f4b3b 369 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 320 362 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II0528 da8e3b1af746cb6fd00bb351332f4b3b 369 SMART SM00342 283 366 9.4E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0528 da8e3b1af746cb6fd00bb351332f4b3b 369 SUPERFAMILY SSF46689 266 317 6.45E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0528 da8e3b1af746cb6fd00bb351332f4b3b 369 Pfam PF12833 Helix-turn-helix domain 289 363 3.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0528 da8e3b1af746cb6fd00bb351332f4b3b 369 Gene3D G3DSA:1.10.10.60 264 367 2.2E-27 T 14-10-2018 VS_II0755 bcd20296484973a2c2cf1a331d5a7463 321 SMART SM00797 36 318 5.4E-118 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VS_II0755 bcd20296484973a2c2cf1a331d5a7463 321 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 15 301 1.4E-80 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VS_II0755 bcd20296484973a2c2cf1a331d5a7463 321 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 37 301 3.4E-85 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VS_II0755 bcd20296484973a2c2cf1a331d5a7463 321 SUPERFAMILY SSF50891 195 301 6.45E-9 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_II0755 bcd20296484973a2c2cf1a331d5a7463 321 Gene3D G3DSA:2.40.100.10 192 312 2.3E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_2629 0a268b2c0aa9b0c902a9b44be728e788 86 SUPERFAMILY SSF109910 3 79 8.11E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VS_2629 0a268b2c0aa9b0c902a9b44be728e788 86 Gene3D G3DSA:1.10.150.250 1 86 5.8E-37 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VS_2629 0a268b2c0aa9b0c902a9b44be728e788 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 5.9E-24 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase VS_1297 88282799fe866e2132f57d4603f3cb21 384 Pfam PF12698 ABC-2 family transporter protein 21 369 1.2E-40 T 14-10-2018 VS_II0899 b654ed3088f6048eafe4a25af799fd09 430 SUPERFAMILY SSF53474 45 417 5.5E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0899 b654ed3088f6048eafe4a25af799fd09 430 Pfam PF00561 alpha/beta hydrolase fold 49 260 3.3E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_II0899 b654ed3088f6048eafe4a25af799fd09 430 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 51 59 1.1E-7 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VS_II0899 b654ed3088f6048eafe4a25af799fd09 430 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 81 92 1.1E-7 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VS_II0899 b654ed3088f6048eafe4a25af799fd09 430 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 138 152 1.1E-7 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VS_1496 3df6716baeb79b700115044879e45dcf 295 SUPERFAMILY SSF50182 128 189 1.08E-14 T 14-10-2018 IPR010920 LSM domain superfamily VS_1496 3df6716baeb79b700115044879e45dcf 295 Gene3D G3DSA:2.30.30.60 143 191 8.6E-9 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VS_1496 3df6716baeb79b700115044879e45dcf 295 SUPERFAMILY SSF82689 200 288 1.7E-6 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VS_1496 3df6716baeb79b700115044879e45dcf 295 Gene3D G3DSA:3.30.70.100 198 289 9.9E-6 T 14-10-2018 VS_1496 3df6716baeb79b700115044879e45dcf 295 Pfam PF00924 Mechanosensitive ion channel 89 286 5.8E-35 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VS_2234 efb47b4acd6b0063581a80c477d1826c 73 Gene3D G3DSA:2.30.30.90 1 73 6.9E-22 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain VS_2234 efb47b4acd6b0063581a80c477d1826c 73 SUPERFAMILY SSF50037 4 72 1.58E-17 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VS_2234 efb47b4acd6b0063581a80c477d1826c 73 SMART SM00899 1 73 5.3E-19 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VS_2234 efb47b4acd6b0063581a80c477d1826c 73 Pfam PF04023 FeoA domain 1 72 5.0E-17 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VS_0578 68a425276573aa1a7dfa24a2ad6dbdfd 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 2.1E-121 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VS_0578 68a425276573aa1a7dfa24a2ad6dbdfd 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.233 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 SUPERFAMILY SSF46785 22 99 3.73E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0386 29ad943930a25aefd25e7471a2b249fc 319 Gene3D G3DSA:3.40.190.10 108 307 2.5E-38 T 14-10-2018 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 Gene3D G3DSA:3.40.190.10 187 283 2.5E-38 T 14-10-2018 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 Pfam PF03466 LysR substrate binding domain 117 307 9.4E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0386 29ad943930a25aefd25e7471a2b249fc 319 SUPERFAMILY SSF53850 106 309 3.26E-39 T 14-10-2018 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0386 29ad943930a25aefd25e7471a2b249fc 319 Gene3D G3DSA:1.10.10.10 14 104 4.5E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0834 ebc92ef4b4cd158316f929fc726fd8ce 89 PIRSF PIRSF004669 1 89 3.6E-28 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VS_0834 ebc92ef4b4cd158316f929fc726fd8ce 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 9.6E-27 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VS_0834 ebc92ef4b4cd158316f929fc726fd8ce 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.7E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VS_0834 ebc92ef4b4cd158316f929fc726fd8ce 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.7E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VS_0834 ebc92ef4b4cd158316f929fc726fd8ce 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.7E-16 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VS_0834 ebc92ef4b4cd158316f929fc726fd8ce 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.8E-31 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 Gene3D G3DSA:1.10.8.60 382 449 6.2E-19 T 14-10-2018 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 Gene3D G3DSA:3.30.450.40 2 194 8.5E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 SUPERFAMILY SSF46689 485 539 3.94E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 Pfam PF00158 Sigma-54 interaction domain 213 377 2.0E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 SMART SM00382 231 378 1.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 SUPERFAMILY SSF52540 214 449 3.86E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 502 519 9.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 519 539 9.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 Pfam PF02954 Bacterial regulatory protein, Fis family 498 536 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 Gene3D G3DSA:1.10.10.60 457 540 1.1E-12 T 14-10-2018 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 Gene3D G3DSA:3.40.50.300 196 381 1.8E-60 T 14-10-2018 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_II1007 ac84eba65f9fc9a37e9b83859de5c617 542 SUPERFAMILY SSF55781 10 179 1.88E-13 T 14-10-2018 VS_0409 8df3bd92d46e9d0e46a1c4aabcf9ee91 313 Pfam PF16537 Type II secretion system protein B 248 307 3.5E-23 T 14-10-2018 IPR032389 Type II secretion system protein B VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 SUPERFAMILY SSF55781 10 168 6.32E-27 T 14-10-2018 VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 Gene3D G3DSA:3.30.450.40 10 171 1.2E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 330 4.4E-33 T 14-10-2018 IPR000160 GGDEF domain VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 Pfam PF13185 GAF domain 25 168 4.6E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 SMART SM00065 25 177 2.4E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 SUPERFAMILY SSF55073 185 329 3.1E-32 T 14-10-2018 IPR029787 Nucleotide cyclase VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 330 6.3E-31 T 14-10-2018 IPR000160 GGDEF domain VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 SMART SM00267 169 330 5.1E-28 T 14-10-2018 IPR000160 GGDEF domain VS_0625 facd0bc9c16bfd00c9a7f79aa1821bac 331 Gene3D G3DSA:3.30.70.270 172 331 8.5E-37 T 14-10-2018 VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 3.4E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.4E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.4E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 Gene3D G3DSA:3.30.1340.10 1 85 4.5E-28 T 14-10-2018 IPR035895 HPr-like superfamily VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 2.6E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 SUPERFAMILY SSF55594 4 90 8.5E-26 T 14-10-2018 IPR035895 HPr-like superfamily VS_2761 324cb9ca8adb847e15f1dc930e4e94c1 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 3.3E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_0831 ccd0b48911d6997edcc82912ae256e25 136 Gene3D G3DSA:2.30.330.10 44 136 1.1E-33 T 14-10-2018 IPR036429 SpoA-like superfamily VS_0831 ccd0b48911d6997edcc82912ae256e25 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VS_0831 ccd0b48911d6997edcc82912ae256e25 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VS_0831 ccd0b48911d6997edcc82912ae256e25 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VS_0831 ccd0b48911d6997edcc82912ae256e25 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.4E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VS_0831 ccd0b48911d6997edcc82912ae256e25 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VS_0831 ccd0b48911d6997edcc82912ae256e25 136 SUPERFAMILY SSF101801 54 134 7.59E-25 T 14-10-2018 IPR036429 SpoA-like superfamily VS_0831 ccd0b48911d6997edcc82912ae256e25 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VS_2848 f0919f5eb15566f7098d4750475aa196 599 SUPERFAMILY SSF51735 402 529 1.24E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2848 f0919f5eb15566f7098d4750475aa196 599 Pfam PF02254 TrkA-N domain 403 512 3.6E-21 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VS_2848 f0919f5eb15566f7098d4750475aa196 599 PRINTS PR00335 TrkA potassium uptake protein signature 402 416 2.9E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_2848 f0919f5eb15566f7098d4750475aa196 599 PRINTS PR00335 TrkA potassium uptake protein signature 448 458 2.9E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_2848 f0919f5eb15566f7098d4750475aa196 599 PRINTS PR00335 TrkA potassium uptake protein signature 459 469 2.9E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_2848 f0919f5eb15566f7098d4750475aa196 599 PRINTS PR00335 TrkA potassium uptake protein signature 419 433 2.9E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_2848 f0919f5eb15566f7098d4750475aa196 599 Pfam PF00999 Sodium/hydrogen exchanger family 14 373 3.4E-65 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VS_2848 f0919f5eb15566f7098d4750475aa196 599 Gene3D G3DSA:3.40.50.720 400 561 9.3E-34 T 14-10-2018 VS_2848 f0919f5eb15566f7098d4750475aa196 599 Gene3D G3DSA:1.20.1530.20 5 383 1.2E-84 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VS_2848 f0919f5eb15566f7098d4750475aa196 599 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 4 599 49.888 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VS_2848 f0919f5eb15566f7098d4750475aa196 599 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 1.2E-80 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Pfam PF00072 Response regulator receiver domain 1129 1248 3.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SUPERFAMILY SSF55785 567 699 1.22E-11 T 14-10-2018 IPR035965 PAS domain superfamily VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 279 1.0E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 721 786 2.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Pfam PF01627 Hpt domain 1356 1434 5.6E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SMART SM00388 721 786 2.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SMART SM00448 1127 1248 1.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:3.30.450.20 572 696 7.4E-14 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:1.20.120.160 1336 1454 3.0E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:1.10.287.130 697 784 4.0E-24 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 311 526 2.2E-23 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SUPERFAMILY SSF47226 1231 1415 3.01E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:3.40.50.2300 1120 1252 2.6E-36 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SMART SM00387 833 951 8.2E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:3.40.190.10 299 524 5.7E-44 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SUPERFAMILY SSF55874 775 945 1.28E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SMART SM00062 308 528 4.4E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SMART SM00062 58 282 1.9E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 834 947 4.0E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SUPERFAMILY SSF53850 309 529 5.43E-28 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:3.40.190.10 394 487 5.7E-44 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:3.40.190.10 149 241 6.7E-42 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 888 3.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 946 3.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 892 902 3.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 909 927 3.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:3.30.565.10 785 950 2.1E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SUPERFAMILY SSF47384 706 787 3.92E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Gene3D G3DSA:3.40.190.10 59 278 6.7E-42 T 14-10-2018 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SUPERFAMILY SSF52172 1125 1253 1.85E-30 T 14-10-2018 IPR011006 CheY-like superfamily VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 Pfam PF08447 PAS fold 613 687 9.0E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VS_0964 0e0bb541d33412dabd3ebb7f00f1bd54 1462 SUPERFAMILY SSF53850 59 280 3.65E-35 T 14-10-2018 VS_2534 69cad25fe878c49ac28300a252022d0a 262 Pfam PF01061 ABC-2 type transporter 14 224 2.4E-39 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VS_2534 69cad25fe878c49ac28300a252022d0a 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 2.2E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VS_2534 69cad25fe878c49ac28300a252022d0a 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 2.2E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VS_2534 69cad25fe878c49ac28300a252022d0a 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 2.2E-6 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VS_2534 69cad25fe878c49ac28300a252022d0a 262 PIRSF PIRSF006648 9 259 1.4E-26 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VS_II0179 1198f19a013427ad02bb8d6aa666c64c 198 SUPERFAMILY SSF52833 39 196 1.74E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0179 1198f19a013427ad02bb8d6aa666c64c 198 Gene3D G3DSA:3.40.30.10 23 198 6.9E-38 T 14-10-2018 VS_II0179 1198f19a013427ad02bb8d6aa666c64c 198 Pfam PF02630 SCO1/SenC 27 178 3.0E-32 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1516 b060e5b4d30cabcefa0e47b886522202 261 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 59 260 4.5E-78 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_1516 b060e5b4d30cabcefa0e47b886522202 261 Gene3D G3DSA:2.40.30.20 152 248 3.6E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_1516 b060e5b4d30cabcefa0e47b886522202 261 SUPERFAMILY SSF63380 151 257 3.83E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_1516 b060e5b4d30cabcefa0e47b886522202 261 Pfam PF00677 Lumazine binding domain 61 145 7.5E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_1516 b060e5b4d30cabcefa0e47b886522202 261 Pfam PF00677 Lumazine binding domain 158 242 3.2E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_1516 b060e5b4d30cabcefa0e47b886522202 261 Gene3D G3DSA:2.40.30.20 59 147 6.8E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_1516 b060e5b4d30cabcefa0e47b886522202 261 SUPERFAMILY SSF63380 59 151 8.5E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 6.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 6.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.7E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 SUPERFAMILY SSF50677 226 415 6.91E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.388 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 SUPERFAMILY SSF47323 661 857 2.24E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 8.1E-79 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Gene3D G3DSA:3.10.20.590 797 857 9.1E-23 T 14-10-2018 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 14-10-2018 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 1.7E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 9.3E-26 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 8.5E-10 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 14-10-2018 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 SUPERFAMILY SSF52374 4 667 3.3E-147 T 14-10-2018 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.4E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VS_0718 5a3004e6a3c04b706c89720c96b06c1b 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 33 58 1.5E-6 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 69 87 1.5E-6 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 32 54 1.1E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 32 52 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 Pfam PF07963 Prokaryotic N-terminal methylation motif 32 54 3.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 Gene3D G3DSA:3.30.700.10 35 154 4.3E-18 T 14-10-2018 VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 55 137 1.1E-15 T 14-10-2018 IPR031982 Type IV minor pilin ComP VS_0653 8613bfbdae6770de863cf7dc9334d19f 160 SUPERFAMILY SSF54523 34 137 3.45E-17 T 14-10-2018 VS_2754 043bcdd0253116018015abf54a4663c6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 1.5E-46 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VS_2754 043bcdd0253116018015abf54a4663c6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 1.8E-45 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VS_2754 043bcdd0253116018015abf54a4663c6 187 Gene3D G3DSA:2.60.450.10 59 186 1.7E-37 T 14-10-2018 VS_2754 043bcdd0253116018015abf54a4663c6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 24.405 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VS_2754 043bcdd0253116018015abf54a4663c6 187 PIRSF PIRSF028513 2 185 3.2E-26 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.4E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.4E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.4E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 SUPERFAMILY SSF54909 66 151 8.98E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 Gene3D G3DSA:1.10.10.10 1 59 3.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 Gene3D G3DSA:3.30.70.920 60 143 5.0E-26 T 14-10-2018 VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 SUPERFAMILY SSF46785 5 65 4.77E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 SMART SM00344 6 115 1.2E-39 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 2.9E-14 T 14-10-2018 VS_II0024 14f37567c2f2e1896114d37b28ba5813 162 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 2.1E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.929 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 7.7E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 SMART SM00411 3 92 8.6E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 SUPERFAMILY SSF47729 3 95 2.36E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 3.8E-49 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VS_1721 a0bc75e3758507dadb61a8fd6a4bd7ce 98 Gene3D G3DSA:4.10.520.10 1 97 6.6E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_0637 da8cc91b0324f598c443548d33500df6 277 Pfam PF04143 Sulphur transport 142 269 5.7E-13 T 14-10-2018 IPR007272 Sulphur transport domain VS_0637 da8cc91b0324f598c443548d33500df6 277 Pfam PF04143 Sulphur transport 14 97 9.1E-7 T 14-10-2018 IPR007272 Sulphur transport domain VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 Pfam PF00206 Lyase 13 337 4.9E-91 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 Gene3D G3DSA:1.10.275.10 6 133 8.1E-51 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 3.9E-6 T 14-10-2018 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 3.9E-6 T 14-10-2018 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 3.9E-6 T 14-10-2018 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 Pfam PF10415 Fumarase C C-terminus 403 455 6.3E-19 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 Gene3D G3DSA:1.10.40.30 403 454 7.2E-18 T 14-10-2018 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 76.016 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 Gene3D G3DSA:1.20.200.10 134 400 1.5E-95 T 14-10-2018 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 SUPERFAMILY SSF48557 5 454 1.18E-136 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 2.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 2.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 2.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family VS_2937 9c2d4d0f3f2341971ce2b5c724e6742a 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 2.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 Pfam PF00117 Glutamine amidotransferase class-I 202 377 2.4E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 SUPERFAMILY SSF52317 158 382 3.97E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 SMART SM01097 3 133 2.0E-94 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 380 1.3E-148 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00097 Anthranilate synthase component II signature 354 367 1.6E-5 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00097 Anthranilate synthase component II signature 269 280 1.6E-5 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00097 Anthranilate synthase component II signature 241 250 1.6E-5 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 7.6E-54 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 Gene3D G3DSA:3.40.50.880 157 383 9.0E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 383 48.715 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 250 6.3E-11 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 269 280 6.3E-11 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 354 367 6.3E-11 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 Gene3D G3DSA:3.50.30.20 2 156 1.6E-61 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 SUPERFAMILY SSF52021 4 139 5.36E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 199 213 6.3E-40 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 238 252 6.3E-40 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 269 285 6.3E-40 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 311 322 6.3E-40 T 14-10-2018 VS_0461 8af6cac9849aa46017ba727ab1fdd449 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 286 303 6.3E-40 T 14-10-2018 VS_1702 612841b0953da0b97b15fa3e7ea50922 342 SUPERFAMILY SSF52733 2 341 1.83E-114 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VS_1702 612841b0953da0b97b15fa3e7ea50922 342 Gene3D G3DSA:1.10.1610.10 13 340 1.1E-121 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VS_1702 612841b0953da0b97b15fa3e7ea50922 342 Pfam PF02277 Phosphoribosyltransferase 2 340 1.5E-128 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VS_1702 612841b0953da0b97b15fa3e7ea50922 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 1.9E-129 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VS_1702 612841b0953da0b97b15fa3e7ea50922 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 36.298 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VS_1702 612841b0953da0b97b15fa3e7ea50922 342 Gene3D G3DSA:3.40.50.10210 51 323 1.1E-121 T 14-10-2018 VS_0100 f186b4f293eb0738253a208bd97c0646 544 Pfam PF03109 ABC1 family 112 230 4.6E-35 T 14-10-2018 IPR004147 UbiB domain VS_0100 f186b4f293eb0738253a208bd97c0646 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 55.835 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VS_0100 f186b4f293eb0738253a208bd97c0646 544 SUPERFAMILY SSF56112 94 436 9.82E-44 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_0100 f186b4f293eb0738253a208bd97c0646 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 446 6.7E-176 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VS_2343 472e733aa259aa30f4142b189185d569 169 SMART SM00935 15 169 3.2E-41 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VS_2343 472e733aa259aa30f4142b189185d569 169 Gene3D G3DSA:3.30.910.20 25 169 2.9E-34 T 14-10-2018 IPR024930 Skp domain superfamily VS_2343 472e733aa259aa30f4142b189185d569 169 PIRSF PIRSF002094 1 169 2.3E-39 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VS_2343 472e733aa259aa30f4142b189185d569 169 SUPERFAMILY SSF111384 26 168 3.27E-30 T 14-10-2018 VS_2343 472e733aa259aa30f4142b189185d569 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 9.7E-26 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VS_0347 f8467b1f41ef467d51f29971bcb3921c 270 Pfam PF00795 Carbon-nitrogen hydrolase 17 256 1.9E-46 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VS_0347 f8467b1f41ef467d51f29971bcb3921c 270 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VS_0347 f8467b1f41ef467d51f29971bcb3921c 270 Gene3D G3DSA:3.60.110.10 1 268 1.3E-85 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VS_0347 f8467b1f41ef467d51f29971bcb3921c 270 SUPERFAMILY SSF56317 4 263 2.75E-74 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VS_2895 352baf82ee081116fb286f7d04d92ca4 106 Hamap MF_00744 Met repressor [metJ]. 1 105 35.001 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VS_2895 352baf82ee081116fb286f7d04d92ca4 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 6.0E-60 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VS_2895 352baf82ee081116fb286f7d04d92ca4 106 SUPERFAMILY SSF47598 3 104 4.22E-57 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VS_2895 352baf82ee081116fb286f7d04d92ca4 106 Gene3D G3DSA:1.10.140.10 2 105 6.4E-57 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VS_2895 352baf82ee081116fb286f7d04d92ca4 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 2.0E-47 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VS_II0626 f8769265f2ce624673a9889b5e7b599d 165 Gene3D G3DSA:3.40.30.10 1 165 3.0E-45 T 14-10-2018 VS_II0626 f8769265f2ce624673a9889b5e7b599d 165 ProSitePatterns PS01265 Tpx family signature. 82 93 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 VS_II0626 f8769265f2ce624673a9889b5e7b599d 165 Pfam PF08534 Redoxin 20 161 4.8E-30 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VS_II0626 f8769265f2ce624673a9889b5e7b599d 165 SUPERFAMILY SSF52833 3 161 2.75E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0626 f8769265f2ce624673a9889b5e7b599d 165 Hamap MF_00269 Thiol peroxidase [tpx]. 2 165 36.807 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 VS_2061 d823d64d2eb5257a5aefbbe02d03f63c 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 1.6E-108 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VS_2061 d823d64d2eb5257a5aefbbe02d03f63c 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 2.3E-91 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VS_2061 d823d64d2eb5257a5aefbbe02d03f63c 335 SUPERFAMILY SSF52540 51 195 2.12E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2061 d823d64d2eb5257a5aefbbe02d03f63c 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.25 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VS_2017 a5e8c8042080777e31a76a17c8d8c76d 405 Gene3D G3DSA:3.20.20.450 3 195 2.4E-17 T 14-10-2018 IPR035919 EAL domain superfamily VS_2017 a5e8c8042080777e31a76a17c8d8c76d 405 PIRSF PIRSF003180 1 402 3.1E-156 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VS_2017 a5e8c8042080777e31a76a17c8d8c76d 405 SUPERFAMILY SSF141868 5 193 1.57E-28 T 14-10-2018 IPR035919 EAL domain superfamily VS_2017 a5e8c8042080777e31a76a17c8d8c76d 405 Pfam PF08668 HDOD domain 205 319 1.2E-12 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VS_2017 a5e8c8042080777e31a76a17c8d8c76d 405 Pfam PF00563 EAL domain 77 190 4.4E-15 T 14-10-2018 IPR001633 EAL domain VS_2017 a5e8c8042080777e31a76a17c8d8c76d 405 SUPERFAMILY SSF109604 181 400 2.95E-43 T 14-10-2018 VS_2017 a5e8c8042080777e31a76a17c8d8c76d 405 SMART SM00052 2 195 0.0016 T 14-10-2018 IPR001633 EAL domain VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 1.1E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 1.1E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 1.1E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 Gene3D G3DSA:2.40.100.10 19 181 1.3E-57 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 SUPERFAMILY SSF50891 19 181 2.19E-52 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 PIRSF PIRSF001467 7 180 1.2E-24 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 179 1.0E-42 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_0689 13d343c614a7ce06e769b52d0d9a55e2 182 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 Gene3D G3DSA:3.40.50.300 1 176 2.3E-58 T 14-10-2018 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 SMART SM00382 25 168 3.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1992 8bc4347a11110b6a10642e8fca11c550 340 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 Gene3D G3DSA:1.10.8.60 177 261 5.2E-26 T 14-10-2018 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 314 4.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 314 334 4.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 Pfam PF00158 Sigma-54 interaction domain 5 168 2.6E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 SUPERFAMILY SSF46689 219 332 4.93E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 SUPERFAMILY SSF52540 5 245 5.92E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1992 8bc4347a11110b6a10642e8fca11c550 340 Pfam PF02954 Bacterial regulatory protein, Fis family 297 325 1.9E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_1992 8bc4347a11110b6a10642e8fca11c550 340 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 331 3.3E-161 T 14-10-2018 IPR014317 Transcription activator PspF VS_1992 8bc4347a11110b6a10642e8fca11c550 340 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_1992 8bc4347a11110b6a10642e8fca11c550 340 Gene3D G3DSA:1.10.10.60 278 334 3.5E-7 T 14-10-2018 VS_2006 77f678f9cf75cf8bf8cf21975af06f27 264 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 247 9.7E-75 T 14-10-2018 IPR005226 UPF0014 family VS_2840 a20aba4887f5a563853e590c920bda64 129 Gene3D G3DSA:3.40.1260.10 1 129 2.9E-51 T 14-10-2018 IPR027396 DsrEFH-like VS_2840 a20aba4887f5a563853e590c920bda64 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 2.9E-53 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VS_2840 a20aba4887f5a563853e590c920bda64 129 Pfam PF02635 DsrE/DsrF-like family 3 129 2.2E-25 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VS_2840 a20aba4887f5a563853e590c920bda64 129 SUPERFAMILY SSF75169 4 129 1.58E-35 T 14-10-2018 IPR027396 DsrEFH-like VS_II0211 2f3ecddb49b4bf5f18fa0c229324fb69 609 Gene3D G3DSA:1.25.40.10 335 456 1.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0211 2f3ecddb49b4bf5f18fa0c229324fb69 609 SUPERFAMILY SSF48452 350 442 2.85E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0211 2f3ecddb49b4bf5f18fa0c229324fb69 609 Gene3D G3DSA:3.40.50.410 84 287 2.2E-25 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0211 2f3ecddb49b4bf5f18fa0c229324fb69 609 Pfam PF00515 Tetratricopeptide repeat 397 429 7.2E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 VS_II0211 2f3ecddb49b4bf5f18fa0c229324fb69 609 SMART SM00028 396 429 4.4E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0211 2f3ecddb49b4bf5f18fa0c229324fb69 609 SUPERFAMILY SSF53300 88 277 4.23E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0211 2f3ecddb49b4bf5f18fa0c229324fb69 609 Pfam PF13519 von Willebrand factor type A domain 88 194 5.3E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 SUPERFAMILY SSF53738 173 280 9.12E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 228 241 5.6E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 104 118 5.6E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 257 272 5.6E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 189 208 5.6E-29 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 105 114 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Gene3D G3DSA:3.40.120.10 191 273 3.2E-27 T 14-10-2018 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 SUPERFAMILY SSF55957 392 472 1.06E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 10 144 1.3E-32 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 SUPERFAMILY SSF53738 282 386 3.06E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Gene3D G3DSA:3.40.120.10 274 392 8.7E-31 T 14-10-2018 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Gene3D G3DSA:3.30.310.50 393 473 3.1E-23 T 14-10-2018 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 282 392 4.2E-23 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Gene3D G3DSA:3.40.120.10 5 154 2.5E-44 T 14-10-2018 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 173 277 9.8E-20 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 397 469 4.5E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0388 48b41f9e6532bae53d62501fc8b77ae5 474 SUPERFAMILY SSF53738 7 196 1.49E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2598 5c93fcc74806feb159fe14928632756d 853 Pfam PF05190 MutS family domain IV 427 517 4.3E-30 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 Gene3D G3DSA:3.30.420.110 127 261 1.8E-36 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 SMART SM00534 606 793 9.0E-119 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 Gene3D G3DSA:3.40.1170.10 1 121 1.1E-51 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VS_2598 5c93fcc74806feb159fe14928632756d 853 Pfam PF05188 MutS domain II 128 253 1.8E-31 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 PIRSF PIRSF037677 189 832 1.6E-132 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 PIRSF PIRSF037677 2 181 9.3E-27 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.321 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 SUPERFAMILY SSF53150 114 266 5.75E-40 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 Gene3D G3DSA:1.10.1420.10 266 558 2.9E-104 T 14-10-2018 VS_2598 5c93fcc74806feb159fe14928632756d 853 Gene3D G3DSA:1.10.1420.10 386 502 2.9E-104 T 14-10-2018 VS_2598 5c93fcc74806feb159fe14928632756d 853 Gene3D G3DSA:3.40.50.300 567 849 2.4E-101 T 14-10-2018 VS_2598 5c93fcc74806feb159fe14928632756d 853 SUPERFAMILY SSF55271 5 115 1.14E-41 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VS_2598 5c93fcc74806feb159fe14928632756d 853 Pfam PF05192 MutS domain III 269 558 1.4E-41 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 Pfam PF00488 MutS domain V 609 796 2.9E-87 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 SUPERFAMILY SSF52540 566 796 1.2E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2598 5c93fcc74806feb159fe14928632756d 853 SMART SM00533 283 590 4.0E-105 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VS_2598 5c93fcc74806feb159fe14928632756d 853 Pfam PF01624 MutS domain I 8 119 2.5E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VS_2598 5c93fcc74806feb159fe14928632756d 853 SUPERFAMILY SSF48334 267 564 8.76E-93 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VS_0084 68d66a3bfa3415300440ac7fe1d6fe3d 680 Gene3D G3DSA:1.10.1370.40 13 675 8.3E-268 T 14-10-2018 VS_0084 68d66a3bfa3415300440ac7fe1d6fe3d 680 Pfam PF01432 Peptidase family M3 222 677 1.9E-163 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VS_0084 68d66a3bfa3415300440ac7fe1d6fe3d 680 SUPERFAMILY SSF55486 1 677 6.74E-211 T 14-10-2018 VS_0084 68d66a3bfa3415300440ac7fe1d6fe3d 680 Gene3D G3DSA:1.10.1370.10 140 610 8.3E-268 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 154.531 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 320 1.0E-150 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 Pfam PF04055 Radical SAM superfamily 91 251 1.8E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 Gene3D G3DSA:3.20.20.70 21 293 1.3E-25 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 SUPERFAMILY SSF102114 52 315 5.23E-69 T 14-10-2018 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 PIRSF PIRSF005963 1 321 3.2E-129 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 2.4E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VS_0707 07ebc1a31f7cf702ab9e84200e97befd 321 SMART SM00729 84 293 1.0E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_0927 eb8a541384450002c4aaf4d0f0e2598e 319 Gene3D G3DSA:1.10.8.760 159 223 8.1E-24 T 14-10-2018 VS_0927 eb8a541384450002c4aaf4d0f0e2598e 319 PIRSF PIRSF020419 1 303 3.7E-74 T 14-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted VS_0927 eb8a541384450002c4aaf4d0f0e2598e 319 SUPERFAMILY SSF159501 36 287 1.78E-70 T 14-10-2018 VS_0927 eb8a541384450002c4aaf4d0f0e2598e 319 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 59 259 2.4E-54 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VS_0927 eb8a541384450002c4aaf4d0f0e2598e 319 Gene3D G3DSA:3.40.50.11550 48 272 8.1E-24 T 14-10-2018 VS_1020 66a666361caeda19423a6de37dcc33a8 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.844 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1020 66a666361caeda19423a6de37dcc33a8 56 SUPERFAMILY SSF57829 2 55 7.94E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VS_1020 66a666361caeda19423a6de37dcc33a8 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.4E-18 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1020 66a666361caeda19423a6de37dcc33a8 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.1E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1766 702931722e08dc9434a5051d88b5b956 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 8.4E-26 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VS_1766 702931722e08dc9434a5051d88b5b956 327 SUPERFAMILY SSF55681 92 327 7.63E-81 T 14-10-2018 VS_1766 702931722e08dc9434a5051d88b5b956 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 1.8E-110 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VS_1766 702931722e08dc9434a5051d88b5b956 327 Gene3D G3DSA:3.30.930.10 7 327 9.7E-126 T 14-10-2018 VS_1766 702931722e08dc9434a5051d88b5b956 327 SUPERFAMILY SSF46589 14 99 5.23E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VS_1766 702931722e08dc9434a5051d88b5b956 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 6.8E-106 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VS_1766 702931722e08dc9434a5051d88b5b956 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.966 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VS_II0895 483b52c0a75348f944c9c840b3dc703a 204 Gene3D G3DSA:1.10.760.10 42 201 5.6E-61 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0895 483b52c0a75348f944c9c840b3dc703a 204 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 180 1.6E-59 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VS_II0895 483b52c0a75348f944c9c840b3dc703a 204 SUPERFAMILY SSF46626 18 195 2.36E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_2504 0f2a6a5d68791408667250dfd387d63d 340 Gene3D G3DSA:3.40.50.150 159 340 4.8E-42 T 14-10-2018 VS_2504 0f2a6a5d68791408667250dfd387d63d 340 SUPERFAMILY SSF53335 156 318 8.51E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2504 0f2a6a5d68791408667250dfd387d63d 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_2504 0f2a6a5d68791408667250dfd387d63d 340 Pfam PF05175 Methyltransferase small domain 172 336 2.3E-59 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VS_2504 0f2a6a5d68791408667250dfd387d63d 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.3E-56 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VS_2504 0f2a6a5d68791408667250dfd387d63d 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 45.973 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VS_2504 0f2a6a5d68791408667250dfd387d63d 340 Gene3D G3DSA:3.40.50.150 1 158 1.8E-49 T 14-10-2018 VS_II0471 00c137942ff014d62f7605f65f31ff8e 446 Pfam PF13629 Pilus formation protein N terminal region 29 98 1.2E-18 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VS_II0471 00c137942ff014d62f7605f65f31ff8e 446 PRINTS PR00811 Bacterial general secretion pathway protein D signature 366 384 1.4E-6 T 14-10-2018 IPR001775 GspD/PilQ family VS_II0471 00c137942ff014d62f7605f65f31ff8e 446 PRINTS PR00811 Bacterial general secretion pathway protein D signature 193 203 1.4E-6 T 14-10-2018 IPR001775 GspD/PilQ family VS_II0471 00c137942ff014d62f7605f65f31ff8e 446 Pfam PF00263 Bacterial type II and III secretion system protein 248 401 1.1E-41 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VS_2038 55e38e04407fb6606eb9ea17729cc0ae 267 SUPERFAMILY SSF53335 19 222 6.84E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2038 55e38e04407fb6606eb9ea17729cc0ae 267 Gene3D G3DSA:3.40.50.150 3 257 7.9E-41 T 14-10-2018 VS_2038 55e38e04407fb6606eb9ea17729cc0ae 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 1.4E-66 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VS_2038 55e38e04407fb6606eb9ea17729cc0ae 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 31.96 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VS_2038 55e38e04407fb6606eb9ea17729cc0ae 267 Pfam PF08241 Methyltransferase domain 57 150 7.3E-26 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 SUPERFAMILY SSF51395 13 322 7.32E-90 T 14-10-2018 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 Gene3D G3DSA:1.10.1200.80 255 324 7.9E-7 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 Pfam PF01207 Dihydrouridine synthase (Dus) 16 321 6.7E-110 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 Gene3D G3DSA:3.20.20.70 9 252 2.3E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 PIRSF PIRSF006621 3 324 2.6E-103 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 4 324 49.575 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VS_2947 70f4223d7fdfee3dad5f56c48898ec49 325 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 323 1.1E-132 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VS_2743 afb7d1a95818d52a7ac664639122ff9d 248 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 57 187 4.1E-42 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VS_2743 afb7d1a95818d52a7ac664639122ff9d 248 Pfam PF01553 Acyltransferase 65 187 7.7E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_2743 afb7d1a95818d52a7ac664639122ff9d 248 SMART SM00563 74 189 5.8E-39 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_2743 afb7d1a95818d52a7ac664639122ff9d 248 SUPERFAMILY SSF69593 12 244 2.35E-56 T 14-10-2018 VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.855 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 SMART SM00851 25 118 3.1E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 Gene3D G3DSA:3.40.50.1380 1 151 1.9E-66 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 PIRSF PIRSF006614 8 151 6.8E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 SUPERFAMILY SSF52335 3 150 9.81E-59 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 2.1E-63 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VS_II1055 d3db5001d6ca7e3000f96797e66c4f97 151 Pfam PF02142 MGS-like domain 25 118 8.5E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VS_2604 6fd121b5f842985011fc29d0186d76d4 160 Pfam PF02542 YgbB family 3 156 4.4E-66 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VS_2604 6fd121b5f842985011fc29d0186d76d4 160 SUPERFAMILY SSF69765 1 158 3.79E-66 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VS_2604 6fd121b5f842985011fc29d0186d76d4 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VS_2604 6fd121b5f842985011fc29d0186d76d4 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 158 35.824 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VS_2604 6fd121b5f842985011fc29d0186d76d4 160 Gene3D G3DSA:3.30.1330.50 1 160 8.0E-70 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VS_2604 6fd121b5f842985011fc29d0186d76d4 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 158 1.2E-68 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VS_0360 3a664e64f23649d8f3964d36c016b910 323 SUPERFAMILY SSF48576 4 322 6.88E-100 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VS_0360 3a664e64f23649d8f3964d36c016b910 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VS_0360 3a664e64f23649d8f3964d36c016b910 323 Gene3D G3DSA:1.10.600.10 1 323 5.3E-122 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VS_0360 3a664e64f23649d8f3964d36c016b910 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VS_0360 3a664e64f23649d8f3964d36c016b910 323 Pfam PF00348 Polyprenyl synthetase 32 268 3.2E-74 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 Gene3D G3DSA:2.40.30.20 1 93 3.7E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.431 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 SUPERFAMILY SSF47917 384 509 3.66E-45 T 14-10-2018 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 Gene3D G3DSA:3.40.50.300 94 382 6.3E-131 T 14-10-2018 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 SUPERFAMILY SSF52540 96 381 3.04E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 SUPERFAMILY SSF50615 10 94 2.35E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 3.5E-11 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 509 3.5E-250 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 506 9.5E-45 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 7.4E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_II0912 a66e5be70138d0ea6fdbd50c1df1f3ea 513 Gene3D G3DSA:1.20.150.20 383 513 2.8E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 PIRSF PIRSF005572 2 384 3.1E-135 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 SUPERFAMILY SSF53383 5 391 7.13E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.397 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-87 T 14-10-2018 IPR000192 Aminotransferase class V domain VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.4E-226 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 Gene3D G3DSA:3.90.1150.10 5 375 4.9E-166 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_0607 c8ecc2c18dfcee39454f08a1ba852760 404 Gene3D G3DSA:3.40.640.10 16 262 4.9E-166 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_0711 d630d202cfed2b4d98810b2f874d9403 280 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 99 193 3.5E-45 T 14-10-2018 IPR012997 Rare lipoprotein A VS_0711 d630d202cfed2b4d98810b2f874d9403 280 SUPERFAMILY SSF50685 102 187 3.45E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily VS_0711 d630d202cfed2b4d98810b2f874d9403 280 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 36 189 24.402 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VS_0711 d630d202cfed2b4d98810b2f874d9403 280 SUPERFAMILY SSF110997 205 274 1.44E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_0711 d630d202cfed2b4d98810b2f874d9403 280 Gene3D G3DSA:2.40.40.10 96 190 8.5E-38 T 14-10-2018 IPR036908 RlpA-like domain superfamily VS_0711 d630d202cfed2b4d98810b2f874d9403 280 Pfam PF05036 Sporulation related domain 205 273 4.3E-6 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VS_0711 d630d202cfed2b4d98810b2f874d9403 280 Pfam PF03330 Lytic transglycolase 97 186 4.0E-27 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VS_II1532 5d3ffd82d12334f12c6a1d9d153b9603 659 Pfam PF11826 Protein of unknown function (DUF3346) 289 513 1.8E-138 T 14-10-2018 IPR021781 Protein of unknown function DUF3346 VS_0780 eb5387bf9769cb4f85cd9dac598d0154 606 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 289 594 1.3E-12 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VS_0780 eb5387bf9769cb4f85cd9dac598d0154 606 Pfam PF00535 Glycosyl transferase family 2 23 143 1.4E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VS_0780 eb5387bf9769cb4f85cd9dac598d0154 606 Gene3D G3DSA:3.90.550.10 5 304 2.1E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0780 eb5387bf9769cb4f85cd9dac598d0154 606 SUPERFAMILY SSF53448 22 247 2.16E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1244 66e5bf202267fca8d8f26c32ea92a594 111 Gene3D G3DSA:2.60.120.10 1 111 1.4E-31 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_1244 66e5bf202267fca8d8f26c32ea92a594 111 PIRSF PIRSF029883 3 111 1.3E-31 T 14-10-2018 IPR025499 Pectin degradation protein KdgF VS_1244 66e5bf202267fca8d8f26c32ea92a594 111 SUPERFAMILY SSF51182 2 110 8.42E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_1244 66e5bf202267fca8d8f26c32ea92a594 111 Pfam PF07883 Cupin domain 35 93 8.8E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 SMART SM00283 277 538 6.0E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 Gene3D G3DSA:3.30.450.20 34 186 7.5E-31 T 14-10-2018 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 Gene3D G3DSA:1.10.287.950 217 540 1.6E-65 T 14-10-2018 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 SUPERFAMILY SSF58104 236 539 5.23E-70 T 14-10-2018 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 6.1E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 6.1E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 6.1E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 6.1E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 Pfam PF17200 Single Cache domain 2 37 185 4.4E-34 T 14-10-2018 IPR033480 Single Cache domain 2 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 SMART SM01049 30 124 2.3E-18 T 14-10-2018 IPR033480 Single Cache domain 2 VS_2703 2f7034972f4c6daaaf6dcfbdc9c55ac5 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 503 4.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_2199 c00bc2abb534ade5ae1af73cc2a8d57e 99 Gene3D G3DSA:1.10.150.280 27 98 1.2E-20 T 14-10-2018 VS_2199 c00bc2abb534ade5ae1af73cc2a8d57e 99 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 36 98 1.0E-24 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VS_2199 c00bc2abb534ade5ae1af73cc2a8d57e 99 SUPERFAMILY SSF47781 34 98 7.23E-26 T 14-10-2018 IPR010994 RuvA domain 2-like VS_2199 c00bc2abb534ade5ae1af73cc2a8d57e 99 Pfam PF12836 Helix-hairpin-helix motif 37 97 2.2E-22 T 14-10-2018 VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 SMART SM00487 1 178 8.8E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 Pfam PF00271 Helicase conserved C-terminal domain 239 342 7.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 SUPERFAMILY SSF57829 424 465 6.23E-7 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 SUPERFAMILY SSF52540 48 359 1.31E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 Gene3D G3DSA:3.40.50.300 1 165 1.3E-29 T 14-10-2018 VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 SMART SM00490 262 344 1.1E-11 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 Gene3D G3DSA:3.40.50.300 210 367 6.3E-32 T 14-10-2018 VS_1854 0f60c2cbb73243b9e2fe0345b10e5994 579 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 3.9E-24 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VS_1927 d67128bc29cf64cf0b4c0a6d80de3228 193 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 70 185 3.3E-42 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VS_1927 d67128bc29cf64cf0b4c0a6d80de3228 193 Pfam PF08534 Redoxin 69 176 2.3E-13 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VS_1927 d67128bc29cf64cf0b4c0a6d80de3228 193 Gene3D G3DSA:3.40.30.10 24 190 3.3E-29 T 14-10-2018 VS_1927 d67128bc29cf64cf0b4c0a6d80de3228 193 SUPERFAMILY SSF52833 67 187 4.55E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II1132 bcafe757a24a0e8500aac17d54558d8b 621 Gene3D G3DSA:1.10.340.60 503 580 4.2E-18 T 14-10-2018 VS_II1132 bcafe757a24a0e8500aac17d54558d8b 621 Pfam PF04183 IucA / IucC family 176 408 1.6E-50 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 VS_II1132 bcafe757a24a0e8500aac17d54558d8b 621 Pfam PF06276 Ferric iron reductase FhuF-like transporter 442 601 1.2E-29 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain VS_0028 051e6555ed3e303358143a2e6bcfdd32 435 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 11 54 4.0E-5 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VS_0028 051e6555ed3e303358143a2e6bcfdd32 435 SUPERFAMILY SSF53300 148 342 6.68E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 Pfam PF00072 Response regulator receiver domain 7 116 5.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 Gene3D G3DSA:3.40.50.2300 1 131 5.8E-35 T 14-10-2018 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 Gene3D G3DSA:1.10.10.60 393 447 5.1E-12 T 14-10-2018 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 Gene3D G3DSA:3.40.50.300 134 315 4.1E-58 T 14-10-2018 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 Gene3D G3DSA:1.10.8.60 316 387 5.8E-18 T 14-10-2018 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 SUPERFAMILY SSF52172 5 190 2.28E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 Pfam PF02954 Bacterial regulatory protein, Fis family 401 441 2.9E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 SMART SM00448 5 116 8.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 SUPERFAMILY SSF52540 145 376 1.78E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 SUPERFAMILY SSF46689 390 443 2.51E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 SMART SM00382 165 309 1.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1288 2c0c81d44790a04b947b3f35de199ac0 450 Pfam PF00158 Sigma-54 interaction domain 145 311 1.7E-63 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 Pfam PF00106 short chain dehydrogenase 3 185 1.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.0E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 SUPERFAMILY SSF51735 2 240 1.07E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1453 49b09af655d6f3c333b24cebdbd3d22e 243 Gene3D G3DSA:3.40.50.720 2 242 2.0E-47 T 14-10-2018 VS_II0987 91df0b0b340e712d00c3b850d5e1ab29 171 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 154 4.9E-34 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VS_II0987 91df0b0b340e712d00c3b850d5e1ab29 171 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 9 157 5.0E-40 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VS_II0987 91df0b0b340e712d00c3b850d5e1ab29 171 Gene3D G3DSA:2.60.40.4150 33 168 1.8E-32 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VS_0182 e60afa0cb3e8b52dc292483989c8650f 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 7.1E-77 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 VS_0182 e60afa0cb3e8b52dc292483989c8650f 224 Pfam PF04002 RadC-like JAB domain 104 222 4.7E-45 T 14-10-2018 IPR025657 RadC-like JAB domain VS_0182 e60afa0cb3e8b52dc292483989c8650f 224 SUPERFAMILY SSF47781 17 91 1.18E-9 T 14-10-2018 IPR010994 RuvA domain 2-like VS_0182 e60afa0cb3e8b52dc292483989c8650f 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VS_0182 e60afa0cb3e8b52dc292483989c8650f 224 SUPERFAMILY SSF102712 145 192 5.23E-5 T 14-10-2018 VS_0182 e60afa0cb3e8b52dc292483989c8650f 224 Gene3D G3DSA:3.40.140.10 102 224 3.8E-44 T 14-10-2018 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 SUPERFAMILY SSF56024 66 313 2.47E-52 T 14-10-2018 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 20 59 5.4E-7 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 484 4.9E-148 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 SMART SM00155 219 246 9.4E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 SMART SM00155 397 424 1.8E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 SUPERFAMILY SSF56024 273 469 4.49E-47 T 14-10-2018 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 Gene3D G3DSA:3.30.870.10 115 301 9.4E-37 T 14-10-2018 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 Gene3D G3DSA:3.30.870.10 302 482 6.1E-30 T 14-10-2018 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 48.952 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 Pfam PF13091 PLD-like domain 134 267 3.3E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VS_1981 19478fa32bfa175b9f9979e8c21c8296 484 Pfam PF13091 PLD-like domain 327 444 4.3E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VS_II0208 11f54ae3586a08cade146961dd310472 249 Pfam PF00005 ABC transporter 19 174 2.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0208 11f54ae3586a08cade146961dd310472 249 SMART SM00382 28 220 2.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0208 11f54ae3586a08cade146961dd310472 249 SUPERFAMILY SSF52540 5 235 8.52E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0208 11f54ae3586a08cade146961dd310472 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0208 11f54ae3586a08cade146961dd310472 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 7.3E-124 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VS_II0208 11f54ae3586a08cade146961dd310472 249 Gene3D G3DSA:3.40.50.300 4 246 7.9E-61 T 14-10-2018 VS_1886 4d28dd222621e4d438dbbdf6b762ad06 88 Gene3D G3DSA:3.30.370.10 1 85 1.2E-18 T 14-10-2018 IPR035905 Barstar-like superfamily VS_1886 4d28dd222621e4d438dbbdf6b762ad06 88 Pfam PF01337 Barstar (barnase inhibitor) 2 79 5.6E-25 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) VS_1886 4d28dd222621e4d438dbbdf6b762ad06 88 SUPERFAMILY SSF52038 2 85 1.7E-23 T 14-10-2018 IPR035905 Barstar-like superfamily VS_1739 f9fa619eda50431a7148ae0b17f79ca5 92 Gene3D G3DSA:1.10.10.10 27 82 2.5E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1739 f9fa619eda50431a7148ae0b17f79ca5 92 SUPERFAMILY SSF88659 38 81 2.43E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_1739 f9fa619eda50431a7148ae0b17f79ca5 92 Hamap MF_00674 UPF0251 protein . 2 92 22.682 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VS_1739 f9fa619eda50431a7148ae0b17f79ca5 92 Pfam PF02001 Protein of unknown function DUF134 2 90 1.1E-19 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VS_2887 c12689e67fc8bb9443c5a5745578dfd1 262 Hamap MF_00082 Acetylglutamate kinase [argB]. 5 254 42.249 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2887 c12689e67fc8bb9443c5a5745578dfd1 262 PIRSF PIRSF000728 1 262 3.7E-69 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2887 c12689e67fc8bb9443c5a5745578dfd1 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 8 233 3.3E-64 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2887 c12689e67fc8bb9443c5a5745578dfd1 262 Gene3D G3DSA:3.40.1160.10 3 259 2.6E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2887 c12689e67fc8bb9443c5a5745578dfd1 262 SUPERFAMILY SSF53633 4 261 5.24E-60 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2887 c12689e67fc8bb9443c5a5745578dfd1 262 Pfam PF00696 Amino acid kinase family 8 237 2.9E-36 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 SUPERFAMILY SSF53901 2 229 4.94E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 54 230 1.7E-23 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 Gene3D G3DSA:3.40.47.10 8 239 6.7E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 247 347 9.1E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 Gene3D G3DSA:3.40.47.10 250 393 2.1E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 SUPERFAMILY SSF53901 204 395 4.94E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 SMART SM00825 Beta-ketoacyl synthase 51 350 9.6E-9 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VS_0773 f15d4f6d83f697380ac2460d1d0499a9 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 149 165 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VS_2631 cb7e11f559d9f0832b9d08776c91c6f5 153 Gene3D G3DSA:3.90.960.10 3 153 1.8E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VS_2631 cb7e11f559d9f0832b9d08776c91c6f5 153 Pfam PF04073 Aminoacyl-tRNA editing domain 23 142 3.4E-29 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VS_2631 cb7e11f559d9f0832b9d08776c91c6f5 153 SUPERFAMILY SSF55826 3 151 9.29E-35 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VS_0539 2ace678154cefdec453d0a715041fa42 318 Gene3D G3DSA:3.40.1010.20 10 285 7.7E-110 T 14-10-2018 VS_0539 2ace678154cefdec453d0a715041fa42 318 Gene3D G3DSA:3.40.1010.20 101 200 7.7E-110 T 14-10-2018 VS_0539 2ace678154cefdec453d0a715041fa42 318 Pfam PF02401 LytB protein 7 286 1.2E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VS_0539 2ace678154cefdec453d0a715041fa42 318 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 288 7.2E-99 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VS_0539 2ace678154cefdec453d0a715041fa42 318 Gene3D G3DSA:3.40.50.11270 16 100 7.7E-110 T 14-10-2018 VS_0539 2ace678154cefdec453d0a715041fa42 318 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 290 37.791 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VS_II1088 01fd52ed9ce41b8f632144c46a9b30f9 283 Gene3D G3DSA:1.10.3720.10 81 277 1.4E-26 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1088 01fd52ed9ce41b8f632144c46a9b30f9 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 272 7.0E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II1088 01fd52ed9ce41b8f632144c46a9b30f9 283 SUPERFAMILY SSF161098 85 268 9.81E-33 T 14-10-2018 IPR035906 MetI-like superfamily VS_2250 33bb9ce5d03a7b53213b16300b396a91 252 Gene3D G3DSA:3.40.1390.30 14 237 7.2E-84 T 14-10-2018 VS_2250 33bb9ce5d03a7b53213b16300b396a91 252 Gene3D G3DSA:3.40.1390.30 97 223 7.2E-84 T 14-10-2018 VS_2250 33bb9ce5d03a7b53213b16300b396a91 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 3.0E-70 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VS_2250 33bb9ce5d03a7b53213b16300b396a91 252 SUPERFAMILY SSF102705 1 251 1.44E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VS_2250 33bb9ce5d03a7b53213b16300b396a91 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 4.2E-61 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VS_0321 5358742c3c70e6c0cdae618337731d53 290 SUPERFAMILY SSF53448 2 270 1.04E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0321 5358742c3c70e6c0cdae618337731d53 290 Pfam PF00483 Nucleotidyl transferase 9 265 8.8E-32 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VS_0321 5358742c3c70e6c0cdae618337731d53 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 5.6E-124 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VS_0321 5358742c3c70e6c0cdae618337731d53 290 Gene3D G3DSA:3.90.550.10 1 278 7.8E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 SUPERFAMILY SSF53955 43 255 3.09E-77 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 Pfam PF00905 Penicillin binding protein transpeptidase domain 449 629 4.7E-25 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 Gene3D G3DSA:1.10.3810.10 48 245 1.1E-77 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 754 2.5E-166 T 14-10-2018 VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 Pfam PF17092 Penicillin-binding protein OB-like domain 316 446 5.5E-31 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 SUPERFAMILY SSF56601 211 832 5.45E-114 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 Pfam PF00912 Transglycosylase 55 229 2.2E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_2878 c23ea5443ce8097ab7dacbbfee110064 852 Gene3D G3DSA:2.40.50.140 315 418 1.6E-32 T 14-10-2018 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 PIRSF PIRSF006004 3 367 2.3E-140 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 SUPERFAMILY SSF102114 100 319 3.14E-14 T 14-10-2018 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 2.4E-153 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 Pfam PF04055 Radical SAM superfamily 109 283 1.5E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 SMART SM00729 104 325 0.008 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.451 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 Gene3D G3DSA:3.20.20.70 68 338 5.8E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0616 1f70a45e4aafaf81e115ef3e5cf1af69 380 Gene3D G3DSA:1.10.150.530 1 67 1.0E-22 T 14-10-2018 VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 Pfam PF07690 Major Facilitator Superfamily 34 401 2.0E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 9.5E-235 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 SUPERFAMILY SSF103473 18 450 6.67E-88 T 14-10-2018 IPR036259 MFS transporter superfamily VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 Gene3D G3DSA:1.20.1250.20 18 227 3.8E-58 T 14-10-2018 VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 Gene3D G3DSA:1.20.1250.20 241 451 4.5E-64 T 14-10-2018 VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 7.1E-150 T 14-10-2018 VS_1612 55a685672cc57f635b0d0c0122d0cb0c 457 PIRSF PIRSF002808 5 453 3.5E-169 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VS_II0084 f8590e53ded70d48093d59628aeea55f 578 Pfam PF06958 S-type Pyocin 209 337 7.9E-18 T 14-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 VS_II1296 46d784058a05ce6c8afa719e6f08bfb8 296 SUPERFAMILY SSF53850 90 293 5.43E-29 T 14-10-2018 VS_II1296 46d784058a05ce6c8afa719e6f08bfb8 296 Gene3D G3DSA:3.40.190.290 93 295 6.2E-20 T 14-10-2018 VS_II1296 46d784058a05ce6c8afa719e6f08bfb8 296 Gene3D G3DSA:1.10.10.10 1 92 1.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1296 46d784058a05ce6c8afa719e6f08bfb8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1296 46d784058a05ce6c8afa719e6f08bfb8 296 Pfam PF03466 LysR substrate binding domain 89 291 5.0E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1296 46d784058a05ce6c8afa719e6f08bfb8 296 SUPERFAMILY SSF46785 2 110 2.83E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2550 6d15e5269898ed5f6f1dd56ce59f43d0 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 3.4E-33 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal VS_2550 6d15e5269898ed5f6f1dd56ce59f43d0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VS_2550 6d15e5269898ed5f6f1dd56ce59f43d0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VS_2550 6d15e5269898ed5f6f1dd56ce59f43d0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VS_2550 6d15e5269898ed5f6f1dd56ce59f43d0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.6E-29 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VS_2550 6d15e5269898ed5f6f1dd56ce59f43d0 289 Pfam PF01478 Type IV leader peptidase family 135 244 1.5E-26 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VS_2550 6d15e5269898ed5f6f1dd56ce59f43d0 289 Gene3D G3DSA:1.20.120.1220 107 258 9.7E-6 T 14-10-2018 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 Hamap MF_00900 GTPase HflX [hflX]. 31 425 40.772 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 PIRSF PIRSF006809 2 455 9.1E-139 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 SUPERFAMILY SSF52540 235 416 5.23E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 Pfam PF16360 GTP-binding GTPase Middle Region 156 231 7.3E-20 T 14-10-2018 IPR032305 GTP-binding protein, middle domain VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 Gene3D G3DSA:3.40.50.300 236 403 4.6E-32 T 14-10-2018 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 115 392 1.8E-93 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 Gene3D G3DSA:3.40.50.11060 23 182 4.0E-32 T 14-10-2018 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 Pfam PF13167 GTP-binding GTPase N-terminal 29 153 1.5E-19 T 14-10-2018 IPR025121 GTPase HflX, N-terminal VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 Pfam PF01926 50S ribosome-binding GTPase 237 355 1.1E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 237 257 1.3E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0880 0246a6fcf048d0786b97bce8862caa7e 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 304 322 1.3E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.27 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.7E-34 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 Gene3D G3DSA:2.30.170.50 1 71 2.6E-33 T 14-10-2018 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.3E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.3E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.3E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 Pfam PF01197 Ribosomal protein L31 1 66 4.0E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2897 59645e4bf93aa6070c6e5e6cb1609442 72 SUPERFAMILY SSF143800 1 68 5.1E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 Gene3D G3DSA:1.10.287.950 317 649 2.0E-73 T 14-10-2018 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 Pfam PF00672 HAMP domain 321 368 4.1E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 452 615 1.6E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 SMART SM00304 374 424 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 SMART SM00304 317 371 1.6E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 Gene3D G3DSA:3.30.450.20 87 192 1.4E-25 T 14-10-2018 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 Pfam PF02743 Cache domain 63 278 7.6E-21 T 14-10-2018 IPR033479 Double Cache domain 1 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 SMART SM00283 386 647 1.3E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 SUPERFAMILY SSF58104 339 648 6.28E-76 T 14-10-2018 VS_1728 a1ef1e64318f76c2f55d3699daf6852b 649 Gene3D G3DSA:3.30.450.20 74 290 1.4E-25 T 14-10-2018 VS_II1070 2cf02377bf2ab33514599a0fbecc9e6c 317 SUPERFAMILY SSF81345 4 312 4.05E-67 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II1070 2cf02377bf2ab33514599a0fbecc9e6c 317 Pfam PF01032 FecCD transport family 11 312 6.7E-73 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II1070 2cf02377bf2ab33514599a0fbecc9e6c 317 Gene3D G3DSA:1.10.3470.10 2 316 7.5E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2126 6c84d064b379030b3c68d6f59e40e265 185 SUPERFAMILY SSF52833 2 184 1.41E-54 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2126 6c84d064b379030b3c68d6f59e40e265 185 Gene3D G3DSA:3.40.30.10 1 184 1.0E-61 T 14-10-2018 VS_2126 6c84d064b379030b3c68d6f59e40e265 185 PIRSF PIRSF000239 2 185 5.7E-52 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_2126 6c84d064b379030b3c68d6f59e40e265 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 3.8E-103 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VS_2126 6c84d064b379030b3c68d6f59e40e265 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 2.7E-6 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_2126 6c84d064b379030b3c68d6f59e40e265 185 Pfam PF00578 AhpC/TSA family 6 131 1.2E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_1205 8730b3d1688b3573f1eed485705374ae 367 Pfam PF01259 SAICAR synthetase 22 293 2.1E-46 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_1205 8730b3d1688b3573f1eed485705374ae 367 Gene3D G3DSA:3.30.470.20 128 284 3.1E-36 T 14-10-2018 VS_1205 8730b3d1688b3573f1eed485705374ae 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 3.5E-215 T 14-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 VS_1205 8730b3d1688b3573f1eed485705374ae 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 20.643 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VS_1205 8730b3d1688b3573f1eed485705374ae 367 SUPERFAMILY SSF56104 14 345 3.27E-65 T 14-10-2018 VS_1205 8730b3d1688b3573f1eed485705374ae 367 Gene3D G3DSA:3.30.200.20 13 127 6.4E-24 T 14-10-2018 VS_2919 574466928ab8fea976eb58279532a2f1 159 Gene3D G3DSA:3.40.1280.10 1 159 5.1E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_2919 574466928ab8fea976eb58279532a2f1 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.489 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VS_2919 574466928ab8fea976eb58279532a2f1 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 3.6E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VS_2919 574466928ab8fea976eb58279532a2f1 159 SUPERFAMILY SSF75217 2 157 8.5E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_2919 574466928ab8fea976eb58279532a2f1 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 158 3.3E-58 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VS_2919 574466928ab8fea976eb58279532a2f1 159 PIRSF PIRSF029256 1 159 1.1E-65 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VS_0426 86818989b48f22786d1619b09023ef2e 452 Pfam PF13180 PDZ domain 265 355 3.7E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_0426 86818989b48f22786d1619b09023ef2e 452 SUPERFAMILY SSF50494 16 273 3.13E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan VS_0426 86818989b48f22786d1619b09023ef2e 452 Gene3D G3DSA:2.40.10.120 38 258 5.3E-84 T 14-10-2018 VS_0426 86818989b48f22786d1619b09023ef2e 452 Pfam PF13365 Trypsin-like peptidase domain 89 225 2.7E-30 T 14-10-2018 VS_0426 86818989b48f22786d1619b09023ef2e 452 SUPERFAMILY SSF50156 380 451 2.63E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VS_0426 86818989b48f22786d1619b09023ef2e 452 PRINTS PR00834 HtrA/DegQ protease family signature 304 316 3.2E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0426 86818989b48f22786d1619b09023ef2e 452 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 3.2E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0426 86818989b48f22786d1619b09023ef2e 452 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 3.2E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0426 86818989b48f22786d1619b09023ef2e 452 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 3.2E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0426 86818989b48f22786d1619b09023ef2e 452 PRINTS PR00834 HtrA/DegQ protease family signature 120 140 3.2E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0426 86818989b48f22786d1619b09023ef2e 452 PRINTS PR00834 HtrA/DegQ protease family signature 99 111 3.2E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VS_0426 86818989b48f22786d1619b09023ef2e 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 370 441 8.0E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_0426 86818989b48f22786d1619b09023ef2e 452 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 450 1.7E-161 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VS_0426 86818989b48f22786d1619b09023ef2e 452 Gene3D G3DSA:2.30.42.10 359 452 5.5E-28 T 14-10-2018 VS_0426 86818989b48f22786d1619b09023ef2e 452 SMART SM00228 264 346 1.1E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_0426 86818989b48f22786d1619b09023ef2e 452 SMART SM00228 371 444 1.7E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_0426 86818989b48f22786d1619b09023ef2e 452 SUPERFAMILY SSF50156 215 358 1.33E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VS_0426 86818989b48f22786d1619b09023ef2e 452 Gene3D G3DSA:2.30.42.10 262 358 7.2E-28 T 14-10-2018 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0281 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1359 63856a198488118f34db3f5b9fa23ae8 459 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 6.2E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VS_1359 63856a198488118f34db3f5b9fa23ae8 459 Gene3D G3DSA:3.40.50.300 1 170 7.5E-15 T 14-10-2018 VS_1359 63856a198488118f34db3f5b9fa23ae8 459 SMART SM00487 1 179 0.0017 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1359 63856a198488118f34db3f5b9fa23ae8 459 Gene3D G3DSA:3.40.50.300 180 380 4.4E-25 T 14-10-2018 VS_1359 63856a198488118f34db3f5b9fa23ae8 459 SUPERFAMILY SSF52540 19 355 4.56E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1112 3a1b612023d6931433502a54c3808abd 139 PIRSF PIRSF003230 2 138 3.2E-47 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VS_1112 3a1b612023d6931433502a54c3808abd 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 4.0E-50 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 VS_1112 3a1b612023d6931433502a54c3808abd 139 Pfam PF03061 Thioesterase superfamily 22 105 3.8E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VS_1112 3a1b612023d6931433502a54c3808abd 139 Gene3D G3DSA:3.10.129.10 3 137 2.3E-41 T 14-10-2018 VS_1112 3a1b612023d6931433502a54c3808abd 139 SUPERFAMILY SSF54637 6 134 1.15E-40 T 14-10-2018 IPR029069 HotDog domain superfamily VS_1112 3a1b612023d6931433502a54c3808abd 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 2.2E-38 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VS_II0925 466e921de0bd5fe28c3c8f8472e0cb8f 293 SUPERFAMILY SSF46785 2 80 7.62E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0925 466e921de0bd5fe28c3c8f8472e0cb8f 293 Gene3D G3DSA:3.40.190.290 93 281 1.0E-14 T 14-10-2018 VS_II0925 466e921de0bd5fe28c3c8f8472e0cb8f 293 Gene3D G3DSA:1.10.10.10 3 87 2.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0925 466e921de0bd5fe28c3c8f8472e0cb8f 293 SUPERFAMILY SSF53850 99 266 1.52E-7 T 14-10-2018 VS_II0925 466e921de0bd5fe28c3c8f8472e0cb8f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0860 46393effdd202c4875f700a49702cf3c 474 Gene3D G3DSA:1.20.1600.10 26 449 8.2E-70 T 14-10-2018 VS_II0860 46393effdd202c4875f700a49702cf3c 474 SUPERFAMILY SSF56954 3 432 1.7E-68 T 14-10-2018 VS_II0860 46393effdd202c4875f700a49702cf3c 474 Pfam PF02321 Outer membrane efflux protein 244 430 1.7E-33 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0860 46393effdd202c4875f700a49702cf3c 474 Pfam PF02321 Outer membrane efflux protein 28 213 3.5E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_0618 959a6ef2b6a455cb9483194775e6bc0c 324 Pfam PF13464 Domain of unknown function (DUF4115) 250 323 9.8E-25 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 VS_0618 959a6ef2b6a455cb9483194775e6bc0c 324 SUPERFAMILY SSF47413 19 57 1.41E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_0618 959a6ef2b6a455cb9483194775e6bc0c 324 Pfam PF13413 Helix-turn-helix domain 23 81 1.1E-17 T 14-10-2018 VS_0618 959a6ef2b6a455cb9483194775e6bc0c 324 Gene3D G3DSA:1.10.260.40 8 118 1.2E-22 T 14-10-2018 VS_II1214 1deae2f014a9b78ceea3f80493b18478 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 3.8E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II1214 1deae2f014a9b78ceea3f80493b18478 280 SUPERFAMILY SSF161098 8 277 1.85E-54 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1214 1deae2f014a9b78ceea3f80493b18478 280 Gene3D G3DSA:1.10.3720.10 2 273 3.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 SUPERFAMILY SSF53098 3 156 1.95E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.1E-72 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 Gene3D G3DSA:3.30.420.10 2 159 1.0E-51 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 5.9E-41 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 5.9E-41 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 5.9E-41 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 5.9E-41 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 5.9E-41 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.4E-60 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1105 f999c0d43b9af399e3534cc06d7cf7d5 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.836 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 SUPERFAMILY SSF48179 167 291 4.08E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 281 1.3E-18 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 Gene3D G3DSA:3.40.50.720 1 165 3.2E-43 T 14-10-2018 VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 SUPERFAMILY SSF51735 6 165 5.77E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 PIRSF PIRSF000103 2 293 1.8E-66 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 Gene3D G3DSA:1.10.1040.10 166 293 4.4E-25 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VS_1248 afd4ec4feaae75c7d8cec51735cd91ab 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 165 3.7E-38 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VS_II0138 74f036667f87d736df95c3fedbd87267 254 Gene3D G3DSA:3.20.20.70 42 254 5.9E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0138 74f036667f87d736df95c3fedbd87267 254 SMART SM00934 45 246 6.0E-21 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_II0138 74f036667f87d736df95c3fedbd87267 254 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 45 238 5.1E-23 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_II0138 74f036667f87d736df95c3fedbd87267 254 SUPERFAMILY SSF51366 41 253 9.92E-34 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 Gene3D G3DSA:3.90.870.10 1 205 3.8E-84 T 14-10-2018 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.0E-73 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 Gene3D G3DSA:3.40.50.10990 206 368 1.2E-30 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.5E-81 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 SUPERFAMILY SSF55821 3 202 1.58E-84 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.86 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 SUPERFAMILY SSF142695 205 367 1.57E-47 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 Pfam PF00925 GTP cyclohydrolase II 207 367 2.3E-39 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VS_2411 35bb490fe7ecd33cb749718bb02a7d9d 369 PIRSF PIRSF001259 3 369 3.9E-128 T 14-10-2018 VS_0279 ac382891acc43cb22dd45b837d0cc957 246 Gene3D G3DSA:3.40.1280.10 78 244 2.3E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_0279 ac382891acc43cb22dd45b837d0cc957 246 Pfam PF00588 SpoU rRNA Methylase family 97 237 9.4E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VS_0279 ac382891acc43cb22dd45b837d0cc957 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 8.1E-18 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VS_0279 ac382891acc43cb22dd45b837d0cc957 246 Gene3D G3DSA:3.30.1330.30 1 77 5.2E-27 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VS_0279 ac382891acc43cb22dd45b837d0cc957 246 SUPERFAMILY SSF55315 3 77 2.12E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VS_0279 ac382891acc43cb22dd45b837d0cc957 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.8E-85 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 VS_0279 ac382891acc43cb22dd45b837d0cc957 246 SMART SM00967 5 81 2.4E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VS_0279 ac382891acc43cb22dd45b837d0cc957 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.503 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VS_0279 ac382891acc43cb22dd45b837d0cc957 246 SUPERFAMILY SSF75217 72 244 1.05E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_II0677 dba822e425077b8ac6c92341a2f87695 709 SUPERFAMILY SSF56935 19 709 4.95E-120 T 14-10-2018 VS_II0677 dba822e425077b8ac6c92341a2f87695 709 Gene3D G3DSA:2.40.170.20 163 709 3.7E-101 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_II0677 dba822e425077b8ac6c92341a2f87695 709 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 57 708 1.3E-89 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VS_II0677 dba822e425077b8ac6c92341a2f87695 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 152 9.0E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_II0677 dba822e425077b8ac6c92341a2f87695 709 Pfam PF00593 TonB dependent receptor 233 708 3.7E-49 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_II0677 dba822e425077b8ac6c92341a2f87695 709 Gene3D G3DSA:2.170.130.10 37 162 2.2E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_II1396 356cabcafe4018876a8e2bdc181cac2b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1396 356cabcafe4018876a8e2bdc181cac2b 305 Gene3D G3DSA:1.10.10.10 1 85 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1396 356cabcafe4018876a8e2bdc181cac2b 305 Pfam PF03466 LysR substrate binding domain 88 297 7.8E-40 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1396 356cabcafe4018876a8e2bdc181cac2b 305 SUPERFAMILY SSF53850 88 298 4.71E-42 T 14-10-2018 VS_II1396 356cabcafe4018876a8e2bdc181cac2b 305 SUPERFAMILY SSF46785 1 87 5.53E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1396 356cabcafe4018876a8e2bdc181cac2b 305 Gene3D G3DSA:3.40.190.290 90 298 6.3E-61 T 14-10-2018 VS_3162 91e34e0b5cf21a90a26301b085e99527 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 2.4E-59 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VS_3162 91e34e0b5cf21a90a26301b085e99527 210 SUPERFAMILY SSF53335 7 208 4.11E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_3162 91e34e0b5cf21a90a26301b085e99527 210 Gene3D G3DSA:3.40.50.150 4 209 6.8E-69 T 14-10-2018 VS_3162 91e34e0b5cf21a90a26301b085e99527 210 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 7.8E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VS_3162 91e34e0b5cf21a90a26301b085e99527 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.678 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VS_3162 91e34e0b5cf21a90a26301b085e99527 210 PIRSF PIRSF003078 1 209 7.3E-62 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 Gene3D G3DSA:1.10.287.610 114 161 1.1E-91 T 14-10-2018 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 Pfam PF00318 Ribosomal protein S2 20 235 1.6E-94 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 169 193 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 Gene3D G3DSA:3.40.50.10490 19 230 1.1E-91 T 14-10-2018 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 SUPERFAMILY SSF52313 17 241 1.57E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 PRINTS PR00395 Ribosomal protein S2 signature 207 221 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 PRINTS PR00395 Ribosomal protein S2 signature 186 197 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 PRINTS PR00395 Ribosomal protein S2 signature 48 57 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 PRINTS PR00395 Ribosomal protein S2 signature 98 115 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 PRINTS PR00395 Ribosomal protein S2 signature 169 186 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 PRINTS PR00395 Ribosomal protein S2 signature 17 35 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 17 28 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 13 236 41.399 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2353 7a0f80768c19785ea2453b57dcdf4a8d 254 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 14 237 7.5E-109 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2929 84b51828e1072a183b8c446eca634c16 176 PRINTS PR01467 Bacterial arginine repressor signature 64 79 2.0E-18 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_2929 84b51828e1072a183b8c446eca634c16 176 PRINTS PR01467 Bacterial arginine repressor signature 47 60 2.0E-18 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_2929 84b51828e1072a183b8c446eca634c16 176 PRINTS PR01467 Bacterial arginine repressor signature 142 157 2.0E-18 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_2929 84b51828e1072a183b8c446eca634c16 176 PRINTS PR01467 Bacterial arginine repressor signature 112 125 2.0E-18 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_2929 84b51828e1072a183b8c446eca634c16 176 Gene3D G3DSA:1.10.10.10 25 96 2.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2929 84b51828e1072a183b8c446eca634c16 176 Hamap MF_00173 Arginine repressor [argR]. 1 176 35.374 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_2929 84b51828e1072a183b8c446eca634c16 176 SUPERFAMILY SSF46785 26 96 1.5E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2929 84b51828e1072a183b8c446eca634c16 176 Gene3D G3DSA:3.30.1360.40 97 175 5.4E-20 T 14-10-2018 VS_2929 84b51828e1072a183b8c446eca634c16 176 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 111 151 2.0E-12 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VS_2929 84b51828e1072a183b8c446eca634c16 176 SUPERFAMILY SSF55252 106 170 9.68E-16 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VS_2929 84b51828e1072a183b8c446eca634c16 176 Pfam PF02863 Arginine repressor, C-terminal domain 108 166 4.2E-16 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VS_2929 84b51828e1072a183b8c446eca634c16 176 Pfam PF01316 Arginine repressor, DNA binding domain 32 94 8.3E-14 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VS_2817 26f7873eb156d4fa987c4797477fd3a2 130 SUPERFAMILY SSF56047 2 129 2.49E-43 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2817 26f7873eb156d4fa987c4797477fd3a2 130 Gene3D G3DSA:3.30.1490.10 73 129 2.4E-24 T 14-10-2018 VS_2817 26f7873eb156d4fa987c4797477fd3a2 130 Pfam PF00410 Ribosomal protein S8 5 129 2.1E-46 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2817 26f7873eb156d4fa987c4797477fd3a2 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.074 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2817 26f7873eb156d4fa987c4797477fd3a2 130 Gene3D G3DSA:3.30.1370.30 2 72 2.2E-25 T 14-10-2018 VS_2817 26f7873eb156d4fa987c4797477fd3a2 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 8.9E-38 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 4.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 4.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 4.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 8.9E-149 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 Gene3D G3DSA:3.30.70.3400 222 440 1.2E-49 T 14-10-2018 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 SUPERFAMILY SSF82866 413 609 1.96E-44 T 14-10-2018 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.885 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 Gene3D G3DSA:1.20.1640.10 459 596 1.0E-5 T 14-10-2018 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 Pfam PF02355 Protein export membrane protein 436 598 6.2E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 5.8E-81 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 Gene3D G3DSA:3.30.1360.200 281 434 1.2E-49 T 14-10-2018 VS_0601 f55262c3a1b9276e9dcfe9759a235268 618 Pfam PF07549 SecD/SecF GG Motif 115 141 3.6E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VS_0074 506c967a09ab4001af11b34349186b4a 575 SMART SM00382 338 534 1.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0074 506c967a09ab4001af11b34349186b4a 575 SMART SM00382 32 231 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0074 506c967a09ab4001af11b34349186b4a 575 SUPERFAMILY SSF52540 303 553 1.07E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0074 506c967a09ab4001af11b34349186b4a 575 SUPERFAMILY SSF52540 3 252 3.22E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0074 506c967a09ab4001af11b34349186b4a 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 0.0012 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_0074 506c967a09ab4001af11b34349186b4a 575 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 270 1.6E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_0074 506c967a09ab4001af11b34349186b4a 575 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0074 506c967a09ab4001af11b34349186b4a 575 Gene3D G3DSA:3.40.50.300 300 575 4.9E-87 T 14-10-2018 VS_0074 506c967a09ab4001af11b34349186b4a 575 Gene3D G3DSA:3.40.50.300 1 289 5.2E-85 T 14-10-2018 VS_0074 506c967a09ab4001af11b34349186b4a 575 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0074 506c967a09ab4001af11b34349186b4a 575 Pfam PF00005 ABC transporter 24 181 4.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0074 506c967a09ab4001af11b34349186b4a 575 Pfam PF00005 ABC transporter 330 483 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0939 f0b80e9dd8f71171046cf02320da7f5d 182 Pfam PF00881 Nitroreductase family 8 161 6.6E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VS_0939 f0b80e9dd8f71171046cf02320da7f5d 182 Gene3D G3DSA:3.40.109.10 1 182 7.3E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_0939 f0b80e9dd8f71171046cf02320da7f5d 182 SUPERFAMILY SSF55469 1 181 1.13E-41 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_0939 f0b80e9dd8f71171046cf02320da7f5d 182 PIRSF PIRSF000232 1 182 6.1E-62 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VS_0217 2e9e4a9d7b45d448e077ac7e668945c4 187 PIRSF PIRSF006118 3 171 4.1E-55 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_0217 2e9e4a9d7b45d448e077ac7e668945c4 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 10 161 2.2E-49 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VS_0217 2e9e4a9d7b45d448e077ac7e668945c4 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 78 143 8.7E-7 T 14-10-2018 VS_0217 2e9e4a9d7b45d448e077ac7e668945c4 187 SUPERFAMILY SSF56784 8 159 1.44E-36 T 14-10-2018 IPR036412 HAD-like superfamily VS_0217 2e9e4a9d7b45d448e077ac7e668945c4 187 Gene3D G3DSA:3.40.50.1000 4 175 1.2E-48 T 14-10-2018 IPR023214 HAD superfamily VS_3055 0b21a8526de9407901f8a755927f5fbf 393 Pfam PF07219 HemY protein N-terminus 26 132 1.2E-27 T 14-10-2018 IPR010817 HemY, N-terminal VS_3055 0b21a8526de9407901f8a755927f5fbf 393 SUPERFAMILY SSF48452 307 389 5.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_3055 0b21a8526de9407901f8a755927f5fbf 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 2.9E-108 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VS_3055 0b21a8526de9407901f8a755927f5fbf 393 SUPERFAMILY SSF48452 84 207 1.44E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_3055 0b21a8526de9407901f8a755927f5fbf 393 SMART SM00028 327 360 0.0031 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2868 a15ca69a60a5a26f5137ef44b58f571e 251 PIRSF PIRSF001461 27 251 2.9E-107 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VS_2868 a15ca69a60a5a26f5137ef44b58f571e 251 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 60 74 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VS_2868 a15ca69a60a5a26f5137ef44b58f571e 251 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 32 243 6.5E-101 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VS_2868 a15ca69a60a5a26f5137ef44b58f571e 251 Gene3D G3DSA:3.20.20.70 32 249 2.7E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2868 a15ca69a60a5a26f5137ef44b58f571e 251 Pfam PF00834 Ribulose-phosphate 3 epimerase family 33 230 2.2E-92 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VS_2868 a15ca69a60a5a26f5137ef44b58f571e 251 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 163 185 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VS_2868 a15ca69a60a5a26f5137ef44b58f571e 251 SUPERFAMILY SSF51366 24 246 1.88E-79 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_1068 fde6642a09a82b3c803c64c578f2bee9 333 SUPERFAMILY SSF56935 39 333 3.36E-22 T 14-10-2018 VS_1068 fde6642a09a82b3c803c64c578f2bee9 333 Pfam PF13609 Gram-negative porin 8 306 6.7E-27 T 14-10-2018 VS_1068 fde6642a09a82b3c803c64c578f2bee9 333 Gene3D G3DSA:2.40.160.10 74 333 2.8E-13 T 14-10-2018 IPR023614 Porin domain superfamily VS_2854 f23b6e1006e9bbc8232468ebc8ed220c 289 Gene3D G3DSA:3.40.50.300 1 289 4.2E-112 T 14-10-2018 VS_2854 f23b6e1006e9bbc8232468ebc8ed220c 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.1E-70 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VS_2854 f23b6e1006e9bbc8232468ebc8ed220c 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.3E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VS_2854 f23b6e1006e9bbc8232468ebc8ed220c 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.3E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VS_2854 f23b6e1006e9bbc8232468ebc8ed220c 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.3E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VS_2854 f23b6e1006e9bbc8232468ebc8ed220c 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.3E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VS_2854 f23b6e1006e9bbc8232468ebc8ed220c 289 SUPERFAMILY SSF52540 4 286 4.31E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 SUPERFAMILY SSF55298 289 410 9.58E-37 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 Gene3D G3DSA:3.30.1330.40 144 264 2.3E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 291 402 4.6E-33 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 SUPERFAMILY SSF55298 7 135 6.13E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 Pfam PF01042 Endoribonuclease L-PSP 170 264 4.9E-23 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 Pfam PF01042 Endoribonuclease L-PSP 28 128 2.4E-23 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 Pfam PF01042 Endoribonuclease L-PSP 292 402 1.1E-27 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 SUPERFAMILY SSF55298 145 272 5.34E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 Gene3D G3DSA:3.30.1330.40 282 406 2.9E-37 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0537 86a365b9140bd69db8381efbfcb5276e 415 Gene3D G3DSA:3.30.1330.40 3 131 1.3E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 Gene3D G3DSA:1.10.580.10 56 380 3.6E-116 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 ProSitePatterns PS00480 Citrate synthase signature. 283 295 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 SUPERFAMILY SSF48256 33 399 1.03E-122 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 35 400 6.1E-157 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 PRINTS PR00143 Citrate synthase signature 353 367 2.6E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 PRINTS PR00143 Citrate synthase signature 276 296 2.6E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 PRINTS PR00143 Citrate synthase signature 333 349 2.6E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 PRINTS PR00143 Citrate synthase signature 223 251 2.6E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 PRINTS PR00143 Citrate synthase signature 150 163 2.6E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 PRINTS PR00143 Citrate synthase signature 201 216 2.6E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 Pfam PF00285 Citrate synthase, C-terminal domain 35 382 6.0E-112 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VS_1344 02fb9b5204e122fe02af53acd63789b8 400 Gene3D G3DSA:1.10.230.10 249 347 3.6E-116 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VS_1344 02fb9b5204e122fe02af53acd63789b8 400 PIRSF PIRSF001369 30 400 1.1E-113 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VS_1735 d6b694918c873b15da92b41955d63605 91 Gene3D G3DSA:4.10.520.10 1 90 1.6E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_1735 d6b694918c873b15da92b41955d63605 91 SUPERFAMILY SSF47729 1 90 9.13E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VS_1735 d6b694918c873b15da92b41955d63605 91 SMART SM00411 1 90 2.7E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1735 d6b694918c873b15da92b41955d63605 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VS_1735 d6b694918c873b15da92b41955d63605 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.6E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1735 d6b694918c873b15da92b41955d63605 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1735 d6b694918c873b15da92b41955d63605 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_1735 d6b694918c873b15da92b41955d63605 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.7E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VS_0388 593629643cfd88b53bbd50be494440a0 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 209 343 1.5E-46 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VS_0388 593629643cfd88b53bbd50be494440a0 585 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 16 580 1.9E-270 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VS_0388 593629643cfd88b53bbd50be494440a0 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 17 184 1.6E-57 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VS_0388 593629643cfd88b53bbd50be494440a0 585 Gene3D G3DSA:3.40.50.1220 203 373 6.3E-61 T 14-10-2018 VS_0388 593629643cfd88b53bbd50be494440a0 585 SUPERFAMILY SSF52518 384 578 5.69E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_0388 593629643cfd88b53bbd50be494440a0 585 SUPERFAMILY SSF52467 202 375 1.35E-63 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VS_0388 593629643cfd88b53bbd50be494440a0 585 SUPERFAMILY SSF52518 15 195 5.05E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_0388 593629643cfd88b53bbd50be494440a0 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 407 556 5.7E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VS_0388 593629643cfd88b53bbd50be494440a0 585 Gene3D G3DSA:3.40.50.970 377 585 4.0E-66 T 14-10-2018 VS_0388 593629643cfd88b53bbd50be494440a0 585 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 444 463 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VS_0388 593629643cfd88b53bbd50be494440a0 585 Gene3D G3DSA:3.40.50.970 9 195 3.8E-73 T 14-10-2018 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 SMART SM00354 4 74 2.9E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 Gene3D G3DSA:3.40.50.2300 68 303 5.7E-60 T 14-10-2018 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 Pfam PF13377 Periplasmic binding protein-like domain 168 310 1.9E-19 T 14-10-2018 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 SUPERFAMILY SSF47413 3 60 7.74E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 SUPERFAMILY SSF53822 63 305 1.57E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 2.1E-133 T 14-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 Gene3D G3DSA:1.10.260.40 2 60 3.2E-20 T 14-10-2018 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 Gene3D G3DSA:3.40.50.2300 163 279 5.7E-60 T 14-10-2018 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 9.3E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_2379 b6c1cf047500c0bfe0bb4e5f10822a4e 314 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 VS_2756 46cac2c71da892d5949b05607ea6684a 241 Gene3D G3DSA:3.40.50.300 2 241 4.3E-70 T 14-10-2018 VS_2756 46cac2c71da892d5949b05607ea6684a 241 SUPERFAMILY SSF52540 3 237 2.61E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2756 46cac2c71da892d5949b05607ea6684a 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.3E-124 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VS_2756 46cac2c71da892d5949b05607ea6684a 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2756 46cac2c71da892d5949b05607ea6684a 241 SMART SM00382 28 231 5.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2756 46cac2c71da892d5949b05607ea6684a 241 Pfam PF00005 ABC transporter 20 166 3.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2756 46cac2c71da892d5949b05607ea6684a 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.1E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VS_2885 9182fe99694457c88abc91169201476c 624 SUPERFAMILY SSF55729 465 599 4.36E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2885 9182fe99694457c88abc91169201476c 624 SUPERFAMILY SSF48557 3 456 1.24E-141 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VS_2885 9182fe99694457c88abc91169201476c 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.684 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2885 9182fe99694457c88abc91169201476c 624 PIRSF PIRSF036456 1 624 0.0 T 14-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2885 9182fe99694457c88abc91169201476c 624 Pfam PF00206 Lyase 6 301 2.6E-88 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VS_2885 9182fe99694457c88abc91169201476c 624 Gene3D G3DSA:1.10.275.10 1 107 9.1E-36 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VS_2885 9182fe99694457c88abc91169201476c 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VS_2885 9182fe99694457c88abc91169201476c 624 Gene3D G3DSA:1.10.40.30 363 433 7.5E-147 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 Gene3D G3DSA:1.20.200.10 108 446 7.5E-147 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.8E-67 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.8E-67 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.8E-67 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.8E-67 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.8E-67 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.8E-67 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 3.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 3.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 3.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family VS_2885 9182fe99694457c88abc91169201476c 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 3.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family VS_2885 9182fe99694457c88abc91169201476c 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 6.9E-24 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2885 9182fe99694457c88abc91169201476c 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.6E-203 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2885 9182fe99694457c88abc91169201476c 624 Gene3D G3DSA:3.40.630.30 464 609 2.1E-27 T 14-10-2018 VS_2885 9182fe99694457c88abc91169201476c 624 Pfam PF00583 Acetyltransferase (GNAT) family 502 570 1.3E-9 T 14-10-2018 IPR000182 GNAT domain VS_II0302 d7c5604bd27a71958e7d44dab942e3eb 430 Gene3D G3DSA:3.10.450.350 65 159 5.6E-33 T 14-10-2018 VS_II0302 d7c5604bd27a71958e7d44dab942e3eb 430 Gene3D G3DSA:2.70.70.10 265 395 7.8E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_II0302 d7c5604bd27a71958e7d44dab942e3eb 430 Gene3D G3DSA:3.10.450.350 160 264 1.7E-33 T 14-10-2018 VS_II0302 d7c5604bd27a71958e7d44dab942e3eb 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 154 5.7E-5 T 14-10-2018 IPR007340 Opacity-associated protein A VS_II0302 d7c5604bd27a71958e7d44dab942e3eb 430 SUPERFAMILY SSF51261 144 390 1.1E-65 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_II0302 d7c5604bd27a71958e7d44dab942e3eb 430 Pfam PF01551 Peptidase family M23 295 388 4.1E-31 T 14-10-2018 IPR016047 Peptidase M23 VS_0824 207355fafe87278efbf1020e643a2eb8 352 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 350 6.6E-96 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 SUPERFAMILY SSF48029 27 136 4.18E-19 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VS_0824 207355fafe87278efbf1020e643a2eb8 352 SUPERFAMILY SSF48029 134 345 5.49E-67 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VS_0824 207355fafe87278efbf1020e643a2eb8 352 PIRSF PIRSF003161 19 352 3.7E-113 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 Gene3D G3DSA:1.10.220.30 109 213 3.6E-29 T 14-10-2018 VS_0824 207355fafe87278efbf1020e643a2eb8 352 Gene3D G3DSA:1.10.220.30 19 103 6.6E-16 T 14-10-2018 VS_0824 207355fafe87278efbf1020e643a2eb8 352 Pfam PF14841 FliG middle domain 135 207 4.4E-26 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VS_0824 207355fafe87278efbf1020e643a2eb8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 292 318 3.4E-55 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 25 41 3.4E-55 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 215 240 3.4E-55 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 54 80 3.4E-55 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 3.4E-55 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 288 3.4E-55 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 134 157 3.4E-55 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VS_0824 207355fafe87278efbf1020e643a2eb8 352 Gene3D G3DSA:1.10.220.30 215 352 3.8E-43 T 14-10-2018 VS_0824 207355fafe87278efbf1020e643a2eb8 352 Pfam PF01706 FliG C-terminal domain 238 344 9.8E-41 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VS_0824 207355fafe87278efbf1020e643a2eb8 352 Pfam PF14842 FliG N-terminal domain 25 125 6.9E-27 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VS_1403 e4d662f75478ec36938fd3314647861f 342 Gene3D G3DSA:3.40.190.10 130 225 2.2E-49 T 14-10-2018 VS_1403 e4d662f75478ec36938fd3314647861f 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 2.2E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1403 e4d662f75478ec36938fd3314647861f 342 SMART SM00062 38 267 2.4E-52 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1403 e4d662f75478ec36938fd3314647861f 342 Gene3D G3DSA:3.40.190.10 28 257 2.2E-49 T 14-10-2018 VS_1403 e4d662f75478ec36938fd3314647861f 342 SUPERFAMILY SSF53850 29 258 8.7E-48 T 14-10-2018 VS_3050 a6e1fb0592f14efaff1f94fa1eb283eb 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 7.6E-41 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_3050 a6e1fb0592f14efaff1f94fa1eb283eb 104 Gene3D G3DSA:3.30.920.10 1 103 5.1E-37 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_3050 a6e1fb0592f14efaff1f94fa1eb283eb 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_3050 a6e1fb0592f14efaff1f94fa1eb283eb 104 Pfam PF01491 Frataxin-like domain 1 100 3.3E-29 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_3050 a6e1fb0592f14efaff1f94fa1eb283eb 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 25.868 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_3050 a6e1fb0592f14efaff1f94fa1eb283eb 104 SUPERFAMILY SSF55387 1 103 1.36E-37 T 14-10-2018 VS_3050 a6e1fb0592f14efaff1f94fa1eb283eb 104 SMART SM01219 1 104 2.5E-50 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 7.9E-253 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 SUPERFAMILY SSF48592 3 230 1.96E-64 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VS_0239 4c1d7e378584012bc42f15126647c5ba 548 SUPERFAMILY SSF52029 185 376 1.21E-82 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VS_0239 4c1d7e378584012bc42f15126647c5ba 548 Gene3D G3DSA:3.50.7.10 192 372 3.9E-237 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VS_0239 4c1d7e378584012bc42f15126647c5ba 548 SUPERFAMILY SSF48592 373 525 4.12E-32 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VS_0239 4c1d7e378584012bc42f15126647c5ba 548 Gene3D G3DSA:3.30.260.10 136 410 3.9E-237 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VS_0239 4c1d7e378584012bc42f15126647c5ba 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 Gene3D G3DSA:1.10.560.10 8 521 3.9E-237 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VS_0239 4c1d7e378584012bc42f15126647c5ba 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.391 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VS_0239 4c1d7e378584012bc42f15126647c5ba 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 4.5E-97 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VS_0345 e2e6a0d3c00ec59196ae072a2b6602c2 489 Gene3D G3DSA:3.40.1260.20 402 488 2.7E-6 T 14-10-2018 VS_0345 e2e6a0d3c00ec59196ae072a2b6602c2 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.5E-101 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VS_0345 e2e6a0d3c00ec59196ae072a2b6602c2 489 SUPERFAMILY SSF50249 39 128 1.72E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0345 e2e6a0d3c00ec59196ae072a2b6602c2 489 Gene3D G3DSA:2.40.50.140 31 127 5.3E-32 T 14-10-2018 VS_0345 e2e6a0d3c00ec59196ae072a2b6602c2 489 SMART SM00316 37 122 8.0E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 VS_0345 e2e6a0d3c00ec59196ae072a2b6602c2 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.5E-170 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VS_0345 e2e6a0d3c00ec59196ae072a2b6602c2 489 Pfam PF00575 S1 RNA binding domain 38 109 1.5E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 VS_II0921 273a762fd33aa88a8f6c32ed837ce57a 81 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 6.9E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0921 273a762fd33aa88a8f6c32ed837ce57a 81 SMART SM00357 5 69 6.1E-6 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_II0921 273a762fd33aa88a8f6c32ed837ce57a 81 SUPERFAMILY SSF50249 4 70 1.09E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_II0921 273a762fd33aa88a8f6c32ed837ce57a 81 Gene3D G3DSA:2.40.50.140 4 69 1.3E-13 T 14-10-2018 VS_II0921 273a762fd33aa88a8f6c32ed837ce57a 81 PIRSF PIRSF002599 2 81 3.0E-12 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VS_2110 66658aeaac9aeaaab9817b183782e69a 571 SUPERFAMILY SSF51338 28 565 1.7E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_2110 66658aeaac9aeaaab9817b183782e69a 571 SUPERFAMILY SSF51556 86 522 2.52E-33 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_2110 66658aeaac9aeaaab9817b183782e69a 571 Gene3D G3DSA:3.10.310.70 106 228 8.5E-103 T 14-10-2018 VS_2110 66658aeaac9aeaaab9817b183782e69a 571 Gene3D G3DSA:2.30.40.10 38 538 8.5E-103 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_2110 66658aeaac9aeaaab9817b183782e69a 571 Gene3D G3DSA:3.20.20.140 87 521 8.5E-103 T 14-10-2018 VS_2110 66658aeaac9aeaaab9817b183782e69a 571 Pfam PF07969 Amidohydrolase family 75 562 2.2E-90 T 14-10-2018 IPR013108 Amidohydrolase 3 VS_II0514 d6d5c42c3f92b8bd7f36e603b252e9bf 486 Pfam PF02321 Outer membrane efflux protein 57 239 2.9E-6 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0514 d6d5c42c3f92b8bd7f36e603b252e9bf 486 Pfam PF02321 Outer membrane efflux protein 293 462 6.7E-11 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_II0514 d6d5c42c3f92b8bd7f36e603b252e9bf 486 Gene3D G3DSA:1.20.1600.10 19 465 9.3E-32 T 14-10-2018 VS_II0514 d6d5c42c3f92b8bd7f36e603b252e9bf 486 SUPERFAMILY SSF56954 14 463 9.42E-43 T 14-10-2018 VS_II0502 2d55b992db9864caedc70429430d5b4b 316 Gene3D G3DSA:3.40.50.1980 141 313 1.2E-45 T 14-10-2018 VS_II0502 2d55b992db9864caedc70429430d5b4b 316 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 72 90 2.1E-5 T 14-10-2018 VS_II0502 2d55b992db9864caedc70429430d5b4b 316 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 103 118 2.1E-5 T 14-10-2018 VS_II0502 2d55b992db9864caedc70429430d5b4b 316 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 292 305 2.1E-5 T 14-10-2018 VS_II0502 2d55b992db9864caedc70429430d5b4b 316 Pfam PF01497 Periplasmic binding protein 55 285 5.2E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_II0502 2d55b992db9864caedc70429430d5b4b 316 Gene3D G3DSA:3.40.50.1980 39 138 2.3E-25 T 14-10-2018 VS_II0502 2d55b992db9864caedc70429430d5b4b 316 SUPERFAMILY SSF53807 50 311 5.1E-50 T 14-10-2018 VS_II1188 8f4cd5fc93fd728b58bb896c11e31298 284 SMART SM00382 29 207 4.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1188 8f4cd5fc93fd728b58bb896c11e31298 284 Pfam PF00005 ABC transporter 21 157 2.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1188 8f4cd5fc93fd728b58bb896c11e31298 284 Gene3D G3DSA:3.40.50.300 1 230 9.7E-44 T 14-10-2018 VS_II1188 8f4cd5fc93fd728b58bb896c11e31298 284 SUPERFAMILY SSF52540 4 222 2.11E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2665 975168fefa39be174a1d928d11db056e 534 SUPERFAMILY SSF159672 1 247 4.71E-54 T 14-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 VS_2665 975168fefa39be174a1d928d11db056e 534 Pfam PF11761 Cobalamin biosynthesis central region 137 238 1.9E-10 T 14-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 VS_2665 975168fefa39be174a1d928d11db056e 534 Pfam PF11760 Cobalamin synthesis G N-terminal 54 131 1.3E-31 T 14-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 VS_2665 975168fefa39be174a1d928d11db056e 534 Gene3D G3DSA:3.30.420.180 231 368 4.0E-34 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 VS_2665 975168fefa39be174a1d928d11db056e 534 SUPERFAMILY SSF52833 413 479 9.62E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2665 975168fefa39be174a1d928d11db056e 534 Gene3D G3DSA:3.40.30.10 413 518 2.1E-8 T 14-10-2018 VS_2665 975168fefa39be174a1d928d11db056e 534 Gene3D G3DSA:3.40.50.11220 1 126 2.9E-27 T 14-10-2018 VS_2665 975168fefa39be174a1d928d11db056e 534 Pfam PF01890 Cobalamin synthesis G C-terminus 241 351 9.7E-31 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 VS_2665 975168fefa39be174a1d928d11db056e 534 SUPERFAMILY SSF159664 234 361 6.93E-34 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 VS_0997 754b414818f48d773222a01512cd7d24 734 Pfam PF13500 AAA domain 16 242 3.0E-50 T 14-10-2018 VS_0997 754b414818f48d773222a01512cd7d24 734 Pfam PF01515 Phosphate acetyl/butaryl transferase 404 719 6.1E-125 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VS_0997 754b414818f48d773222a01512cd7d24 734 Gene3D G3DSA:3.40.50.10950 411 722 8.0E-134 T 14-10-2018 VS_0997 754b414818f48d773222a01512cd7d24 734 Gene3D G3DSA:3.40.50.300 13 237 3.0E-11 T 14-10-2018 VS_0997 754b414818f48d773222a01512cd7d24 734 Gene3D G3DSA:3.40.1390.20 238 378 1.2E-13 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VS_0997 754b414818f48d773222a01512cd7d24 734 SUPERFAMILY SSF52540 14 253 2.3E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0997 754b414818f48d773222a01512cd7d24 734 Pfam PF07085 DRTGG domain 246 357 7.7E-28 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VS_0997 754b414818f48d773222a01512cd7d24 734 SUPERFAMILY SSF75138 242 366 5.1E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VS_0997 754b414818f48d773222a01512cd7d24 734 Gene3D G3DSA:3.40.50.10750 542 695 8.0E-134 T 14-10-2018 VS_0997 754b414818f48d773222a01512cd7d24 734 PIRSF PIRSF006107 14 727 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VS_0997 754b414818f48d773222a01512cd7d24 734 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 419 719 5.0E-131 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VS_0997 754b414818f48d773222a01512cd7d24 734 SUPERFAMILY SSF53659 405 722 4.11E-95 T 14-10-2018 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 Gene3D G3DSA:3.40.710.10 249 631 1.5E-90 T 14-10-2018 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 SUPERFAMILY SSF56601 255 624 1.42E-92 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 622 3.9E-226 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.2E-48 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 618 7.8E-71 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 SUPERFAMILY SSF56519 58 253 7.32E-54 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 625 48.836 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 Gene3D G3DSA:3.90.1310.10 65 248 5.6E-50 T 14-10-2018 VS_II0763 9f6b58eee6e444d3173c96c04dab303e 632 Gene3D G3DSA:3.30.1390.30 86 161 5.6E-50 T 14-10-2018 VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 7.4E-155 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 SUPERFAMILY SSF51735 137 303 5.19E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 SMART SM01003 4 137 7.0E-79 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 SUPERFAMILY SSF52283 1 360 8.5E-67 T 14-10-2018 VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 Gene3D G3DSA:3.40.50.720 130 305 2.0E-136 T 14-10-2018 VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.1E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.9E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 SMART SM01002 149 297 2.9E-87 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 Gene3D G3DSA:3.40.50.720 3 353 2.0E-136 T 14-10-2018 VS_2048 43fea59ffbd7810e3b0f587d5c4318f2 374 PIRSF PIRSF000183 1 371 3.3E-156 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VS_0324 d1f87c41b12e022778934b048d98576d 671 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 40 134 5.9E-26 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VS_0324 d1f87c41b12e022778934b048d98576d 671 SUPERFAMILY SSF141868 429 637 2.48E-39 T 14-10-2018 IPR035919 EAL domain superfamily VS_0324 d1f87c41b12e022778934b048d98576d 671 SMART SM00267 216 386 3.8E-7 T 14-10-2018 IPR000160 GGDEF domain VS_0324 d1f87c41b12e022778934b048d98576d 671 SUPERFAMILY SSF55073 233 386 3.61E-16 T 14-10-2018 IPR029787 Nucleotide cyclase VS_0324 d1f87c41b12e022778934b048d98576d 671 Pfam PF00563 EAL domain 433 636 1.2E-43 T 14-10-2018 IPR001633 EAL domain VS_0324 d1f87c41b12e022778934b048d98576d 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 379 1.9E-18 T 14-10-2018 IPR000160 GGDEF domain VS_0324 d1f87c41b12e022778934b048d98576d 671 Gene3D G3DSA:3.30.70.270 212 386 8.9E-20 T 14-10-2018 VS_0324 d1f87c41b12e022778934b048d98576d 671 Gene3D G3DSA:3.20.20.450 397 645 5.8E-38 T 14-10-2018 IPR035919 EAL domain superfamily VS_0324 d1f87c41b12e022778934b048d98576d 671 SMART SM00052 397 638 4.3E-15 T 14-10-2018 IPR001633 EAL domain VS_0429 16f6883bfa2f0cff9a3e4c530cf16019 142 Gene3D G3DSA:3.90.1180.10 1 142 5.1E-64 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VS_0429 16f6883bfa2f0cff9a3e4c530cf16019 142 Pfam PF00572 Ribosomal protein L13 15 138 9.8E-57 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VS_0429 16f6883bfa2f0cff9a3e4c530cf16019 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 6.4E-65 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0429 16f6883bfa2f0cff9a3e4c530cf16019 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.797 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VS_0429 16f6883bfa2f0cff9a3e4c530cf16019 142 SUPERFAMILY SSF52161 1 140 2.35E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VS_0429 16f6883bfa2f0cff9a3e4c530cf16019 142 PIRSF PIRSF002181 1 142 5.2E-54 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VS_0429 16f6883bfa2f0cff9a3e4c530cf16019 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VS_II1458 fdca8d2b6a0145584037ca55cf55e104 195 Gene3D G3DSA:3.50.70.10 54 176 5.2E-6 T 14-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 VS_II1458 fdca8d2b6a0145584037ca55cf55e104 195 Pfam PF16036 Chalcone isomerase-like 85 192 8.2E-12 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 SMART SM00382 50 233 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 SUPERFAMILY SSF52540 24 265 2.13E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 Gene3D G3DSA:2.40.50.940 244 368 1.5E-25 T 14-10-2018 VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 Gene3D G3DSA:2.40.50.140 302 359 1.5E-25 T 14-10-2018 VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 Gene3D G3DSA:3.40.50.300 24 243 1.6E-64 T 14-10-2018 VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 SUPERFAMILY SSF50331 258 375 2.21E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_II1215 60e9cd87cadc6800e44cec9915f5e1e1 396 Pfam PF00005 ABC transporter 42 183 1.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2351 cee126e802530af31eea990e76f867d7 243 SUPERFAMILY SSF53633 7 240 1.83E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2351 cee126e802530af31eea990e76f867d7 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.624 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VS_2351 cee126e802530af31eea990e76f867d7 243 Gene3D G3DSA:3.40.1160.10 3 243 2.7E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2351 cee126e802530af31eea990e76f867d7 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.9E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VS_2351 cee126e802530af31eea990e76f867d7 243 PIRSF PIRSF005650 4 243 1.8E-88 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VS_2351 cee126e802530af31eea990e76f867d7 243 Pfam PF00696 Amino acid kinase family 11 219 2.5E-26 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_1077 b3dd8636608cc391a39e975f7a60209d 236 SUPERFAMILY SSF55729 4 224 3.13E-86 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1077 b3dd8636608cc391a39e975f7a60209d 236 Gene3D G3DSA:2.30.210.20 4 63 9.3E-26 T 14-10-2018 VS_1077 b3dd8636608cc391a39e975f7a60209d 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 205 2.0E-67 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VS_1077 b3dd8636608cc391a39e975f7a60209d 236 Gene3D G3DSA:3.40.630.70 64 235 3.5E-60 T 14-10-2018 VS_1077 b3dd8636608cc391a39e975f7a60209d 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 41 217 4.7E-76 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VS_1077 b3dd8636608cc391a39e975f7a60209d 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 88.389 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VS_II0373 95ed898b12544cbf8a09778f8d727286 324 Pfam PF01040 UbiA prenyltransferase family 58 304 2.6E-63 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VS_II0373 95ed898b12544cbf8a09778f8d727286 324 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 41 322 19.262 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VS_II0373 95ed898b12544cbf8a09778f8d727286 324 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 43 320 6.1E-97 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VS_II0373 95ed898b12544cbf8a09778f8d727286 324 Gene3D G3DSA:1.10.357.140 48 210 6.0E-22 T 14-10-2018 VS_II0373 95ed898b12544cbf8a09778f8d727286 324 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 96 118 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 Gene3D G3DSA:3.40.50.720 21 277 3.1E-66 T 14-10-2018 VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 39 274 4.1E-50 T 14-10-2018 VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 1.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 1.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 1.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 32 49 1.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 167 1.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 105 116 1.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 198 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 105 116 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II1274 3a1ca97ec6c6cc9c388170e3f2dfb9c7 279 SUPERFAMILY SSF51735 30 276 1.7E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2377 351896215c125e01df628b1f93e7e804 564 Pfam PF16657 Maltogenic Amylase, C-terminal domain 483 542 3.2E-8 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal VS_2377 351896215c125e01df628b1f93e7e804 564 Pfam PF00128 Alpha amylase, catalytic domain 36 379 2.9E-126 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_2377 351896215c125e01df628b1f93e7e804 564 SMART SM00642 21 422 1.4E-156 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_2377 351896215c125e01df628b1f93e7e804 564 Gene3D G3DSA:3.90.400.10 115 178 3.4E-29 T 14-10-2018 VS_2377 351896215c125e01df628b1f93e7e804 564 Gene3D G3DSA:3.20.20.80 4 114 2.4E-49 T 14-10-2018 VS_2377 351896215c125e01df628b1f93e7e804 564 Gene3D G3DSA:3.20.20.80 179 483 1.6E-115 T 14-10-2018 VS_2377 351896215c125e01df628b1f93e7e804 564 SUPERFAMILY SSF51011 483 562 2.34E-16 T 14-10-2018 VS_2377 351896215c125e01df628b1f93e7e804 564 Gene3D G3DSA:2.60.40.1180 484 562 1.7E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VS_2377 351896215c125e01df628b1f93e7e804 564 SUPERFAMILY SSF51445 12 480 1.83E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_2377 351896215c125e01df628b1f93e7e804 564 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 13 560 7.0E-265 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 Gene3D G3DSA:3.40.190.10 102 291 5.5E-36 T 14-10-2018 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 Gene3D G3DSA:3.40.190.10 163 264 5.5E-36 T 14-10-2018 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 SUPERFAMILY SSF46785 6 112 5.45E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.7E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 Pfam PF03466 LysR substrate binding domain 92 295 8.9E-26 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 SUPERFAMILY SSF53850 94 297 3.44E-29 T 14-10-2018 VS_II0426 7ebc401f2743bf25cf5262977d1b2497 308 Gene3D G3DSA:1.10.10.10 6 92 5.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2567 96b7a1ca44b31175038ed87b7fffacc2 319 SUPERFAMILY SSF51735 126 262 7.6E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2567 96b7a1ca44b31175038ed87b7fffacc2 319 SMART SM00829 14 314 7.3E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VS_2567 96b7a1ca44b31175038ed87b7fffacc2 319 Pfam PF13602 Zinc-binding dehydrogenase 193 314 2.2E-19 T 14-10-2018 VS_2567 96b7a1ca44b31175038ed87b7fffacc2 319 Gene3D G3DSA:3.40.50.720 135 265 2.8E-90 T 14-10-2018 VS_2567 96b7a1ca44b31175038ed87b7fffacc2 319 SUPERFAMILY SSF50129 5 156 2.59E-35 T 14-10-2018 IPR011032 GroES-like superfamily VS_2567 96b7a1ca44b31175038ed87b7fffacc2 319 Gene3D G3DSA:3.90.180.10 12 312 2.8E-90 T 14-10-2018 VS_2567 96b7a1ca44b31175038ed87b7fffacc2 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 95 1.1E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VS_II1045 6730e6f895f4034e183afea8c0c53025 107 PIRSF PIRSF028139 1 107 1.5E-36 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VS_II1045 6730e6f895f4034e183afea8c0c53025 107 SUPERFAMILY SSF143410 1 104 8.11E-32 T 14-10-2018 IPR023389 DOPA-like superfamily VS_II1045 6730e6f895f4034e183afea8c0c53025 107 Gene3D G3DSA:3.30.70.1240 1 105 5.3E-27 T 14-10-2018 IPR023389 DOPA-like superfamily VS_II1045 6730e6f895f4034e183afea8c0c53025 107 Pfam PF08883 Dopa 4,5-dioxygenase family 2 100 2.3E-25 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VS_0126 8d55cfc902523e7fc990aa008fc2e430 313 PIRSF PIRSF035875 8 298 5.7E-50 T 14-10-2018 IPR017039 Virulence factor BrkB VS_0126 8d55cfc902523e7fc990aa008fc2e430 313 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 292 23.191 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VS_0126 8d55cfc902523e7fc990aa008fc2e430 313 Pfam PF03631 Virulence factor BrkB 33 279 1.2E-54 T 14-10-2018 IPR017039 Virulence factor BrkB VS_0126 8d55cfc902523e7fc990aa008fc2e430 313 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 279 1.4E-79 T 14-10-2018 IPR017039 Virulence factor BrkB VS_2742 26c1b414e10cc1dbfbbb047edd263e68 129 Gene3D G3DSA:3.30.1330.40 1 129 5.3E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_2742 26c1b414e10cc1dbfbbb047edd263e68 129 SUPERFAMILY SSF55298 2 128 7.7E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_2742 26c1b414e10cc1dbfbbb047edd263e68 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 3.7E-53 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VS_2742 26c1b414e10cc1dbfbbb047edd263e68 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.0E-44 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_2742 26c1b414e10cc1dbfbbb047edd263e68 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VS_II1156 b4c9e21b7118cb856cb975d38f79dfb6 551 SUPERFAMILY SSF53850 121 546 2.48E-50 T 14-10-2018 VS_II1156 b4c9e21b7118cb856cb975d38f79dfb6 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 181 326 2.6E-21 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II1156 b4c9e21b7118cb856cb975d38f79dfb6 551 Gene3D G3DSA:3.40.190.10 125 378 3.4E-33 T 14-10-2018 VS_II1156 b4c9e21b7118cb856cb975d38f79dfb6 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 9 111 9.5E-15 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VS_II1156 b4c9e21b7118cb856cb975d38f79dfb6 551 PIRSF PIRSF002741 401 551 5.8E-4 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_II1156 b4c9e21b7118cb856cb975d38f79dfb6 551 PIRSF PIRSF002741 99 325 1.4E-29 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_2623 4d1f9c62a70c45648508644f9ebb9994 320 Pfam PF17188 MucB/RseB C-terminal domain 218 311 1.8E-28 T 14-10-2018 IPR033436 MucB/RseB, C-terminal VS_2623 4d1f9c62a70c45648508644f9ebb9994 320 Gene3D G3DSA:3.30.200.100 217 316 6.8E-29 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VS_2623 4d1f9c62a70c45648508644f9ebb9994 320 Pfam PF03888 MucB/RseB N-terminal domain 25 195 9.7E-61 T 14-10-2018 IPR033434 MucB/RseB, N-terminal VS_2623 4d1f9c62a70c45648508644f9ebb9994 320 PIRSF PIRSF005427 1 317 1.8E-86 T 14-10-2018 IPR005588 MucB/RseB VS_2623 4d1f9c62a70c45648508644f9ebb9994 320 Gene3D G3DSA:2.50.20.10 24 208 8.8E-55 T 14-10-2018 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 Gene3D G3DSA:3.30.450.20 64 168 1.6E-55 T 14-10-2018 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 SMART SM00283 365 626 2.0E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 SUPERFAMILY SSF103190 90 174 1.1E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_1907 ef202792502274f0a9a73c62b8d6c250 627 Gene3D G3DSA:3.30.450.20 52 266 1.6E-55 T 14-10-2018 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 SMART SM00304 296 350 7.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 SMART SM00304 353 403 21.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 SUPERFAMILY SSF58104 318 627 9.55E-77 T 14-10-2018 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 593 2.1E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 Pfam PF00672 HAMP domain 300 345 2.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 Pfam PF02743 Cache domain 40 258 2.8E-30 T 14-10-2018 IPR033479 Double Cache domain 1 VS_1907 ef202792502274f0a9a73c62b8d6c250 627 Gene3D G3DSA:1.10.287.950 296 627 3.3E-71 T 14-10-2018 VS_1850 7e6f9bbaa4347751104e938fae674998 478 Gene3D G3DSA:3.40.50.720 2 251 8.7E-27 T 14-10-2018 VS_1850 7e6f9bbaa4347751104e938fae674998 478 Pfam PF11066 Protein of unknown function (DUF2867) 330 464 4.8E-14 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 VS_1850 7e6f9bbaa4347751104e938fae674998 478 SUPERFAMILY SSF51735 1 293 6.82E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1850 7e6f9bbaa4347751104e938fae674998 478 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 120 4.4E-10 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VS_1487 7696748788a789d73f8539314ac5f01a 224 Gene3D G3DSA:1.10.3480.10 15 211 3.3E-43 T 14-10-2018 VS_1487 7696748788a789d73f8539314ac5f01a 224 SUPERFAMILY SSF89155 20 205 3.14E-53 T 14-10-2018 IPR036411 TorD-like superfamily VS_1487 7696748788a789d73f8539314ac5f01a 224 Pfam PF02613 Nitrate reductase delta subunit 58 172 3.3E-29 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 Gene3D G3DSA:3.40.50.300 199 395 7.9E-46 T 14-10-2018 VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 Gene3D G3DSA:3.40.50.300 1 197 1.6E-68 T 14-10-2018 VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 130 139 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 Pfam PF00270 DEAD/DEAH box helicase 18 177 1.8E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 SUPERFAMILY SSF52540 56 338 1.52E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 SMART SM00487 11 207 1.2E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 Pfam PF16124 RecQ zinc-binding 505 562 2.3E-9 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 350 5.3E-113 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 Gene3D G3DSA:1.10.10.10 498 643 9.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 SMART SM00490 241 322 3.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0703 2e9cdcb14a6d6ceb79b2401c468af05d 644 Pfam PF00271 Helicase conserved C-terminal domain 214 321 1.7E-18 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 1.4E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 SMART SM00862 156 232 1.9E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 Gene3D G3DSA:3.40.50.2300 3 126 3.4E-32 T 14-10-2018 VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 SUPERFAMILY SSF46894 137 233 1.59E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 SUPERFAMILY SSF52172 4 130 1.37E-35 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 Gene3D G3DSA:1.10.10.10 127 234 2.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 Pfam PF00072 Response regulator receiver domain 11 119 2.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1182 1b150b70eadd1a22575801fc518bbe3d 234 SMART SM00448 9 119 1.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0970 70346243e46b199a04197fd0be13e0fe 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 2.2E-23 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_0970 70346243e46b199a04197fd0be13e0fe 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VS_0970 70346243e46b199a04197fd0be13e0fe 138 SUPERFAMILY SSF54593 3 130 4.03E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_0970 70346243e46b199a04197fd0be13e0fe 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 8.4E-68 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VS_0970 70346243e46b199a04197fd0be13e0fe 138 Gene3D G3DSA:3.10.180.10 3 135 2.6E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2823 7cd9c4be8555054feca4bd709d501566 64 Pfam PF00831 Ribosomal L29 protein 5 61 1.1E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2823 7cd9c4be8555054feca4bd709d501566 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 2.5E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2823 7cd9c4be8555054feca4bd709d501566 64 SUPERFAMILY SSF46561 2 62 4.97E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2823 7cd9c4be8555054feca4bd709d501566 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 19.082 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2823 7cd9c4be8555054feca4bd709d501566 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2823 7cd9c4be8555054feca4bd709d501566 64 Gene3D G3DSA:1.10.287.310 2 64 8.0E-31 T 14-10-2018 VS_II0608 b177b472469821b498dae1a749f22145 395 SUPERFAMILY SSF51182 3 384 8.19E-100 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II0608 b177b472469821b498dae1a749f22145 395 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 261 286 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 381 1.1E-93 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 80 101 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 280 299 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 6 24 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 125 148 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 226 241 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 261 280 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PRINTS PR00714 Phosphomannose isomerase type I signature 242 261 6.5E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 Gene3D G3DSA:2.60.120.10 307 388 7.1E-131 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II0608 b177b472469821b498dae1a749f22145 395 Gene3D G3DSA:2.60.120.10 8 281 7.1E-131 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II0608 b177b472469821b498dae1a749f22145 395 Gene3D G3DSA:1.10.441.10 149 306 7.1E-131 T 14-10-2018 VS_II0608 b177b472469821b498dae1a749f22145 395 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 125 133 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 PIRSF PIRSF001480 1 395 3.1E-101 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_II0608 b177b472469821b498dae1a749f22145 395 Pfam PF01238 Phosphomannose isomerase type I 3 360 2.0E-86 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VS_2842 6296688d262078fc1f911c1c6df13c29 262 Gene3D G3DSA:1.10.287.460 31 147 1.2E-30 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VS_2842 6296688d262078fc1f911c1c6df13c29 262 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 251 1.1E-30 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VS_2842 6296688d262078fc1f911c1c6df13c29 262 SUPERFAMILY SSF54534 47 253 1.04E-64 T 14-10-2018 VS_2842 6296688d262078fc1f911c1c6df13c29 262 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 40 157 3.8E-33 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VS_2842 6296688d262078fc1f911c1c6df13c29 262 Gene3D G3DSA:3.10.50.40 148 260 2.4E-44 T 14-10-2018 VS_0797 48380f04243fa3e72514c9a790d12615 140 SUPERFAMILY SSF101498 38 134 3.01E-19 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VS_0797 48380f04243fa3e72514c9a790d12615 140 Pfam PF04316 Anti-sigma-28 factor, FlgM 78 131 6.3E-19 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VS_0797 48380f04243fa3e72514c9a790d12615 140 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 39 134 3.1E-23 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VS_1236 82084ed309dd6f534468e969d312a717 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VS_1236 82084ed309dd6f534468e969d312a717 192 SUPERFAMILY SSF48498 79 179 5.78E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_1236 82084ed309dd6f534468e969d312a717 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 6.6E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1236 82084ed309dd6f534468e969d312a717 192 SUPERFAMILY SSF46689 4 69 2.89E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1236 82084ed309dd6f534468e969d312a717 192 Gene3D G3DSA:1.10.357.10 2 189 3.5E-45 T 14-10-2018 VS_1236 82084ed309dd6f534468e969d312a717 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 5.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1236 82084ed309dd6f534468e969d312a717 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 5.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0508 01e65272610328de244591be009ea1eb 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 3.4E-136 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VS_0508 01e65272610328de244591be009ea1eb 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 2.3E-152 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 65 194 2.5E-22 T 14-10-2018 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 4.7E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 SUPERFAMILY SSF56784 2 222 2.28E-48 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 220 8.7E-82 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 Gene3D G3DSA:3.40.50.1000 5 218 6.2E-61 T 14-10-2018 IPR023214 HAD superfamily VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 2.1E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 2.1E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 2.1E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.1E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 195 7.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0447 e9ee1794cf1668d7d4b195baa2b5f523 224 Gene3D G3DSA:1.10.150.240 16 95 6.2E-61 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_0561 026627e51efe5361cfb385db79e77ea2 246 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 245 3.8E-60 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VS_0561 026627e51efe5361cfb385db79e77ea2 246 SUPERFAMILY SSF64438 3 246 2.56E-82 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VS_0561 026627e51efe5361cfb385db79e77ea2 246 Gene3D G3DSA:3.60.140.10 1 246 1.2E-87 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VS_0561 026627e51efe5361cfb385db79e77ea2 246 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 244 2.5E-73 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VS_2568 f27f53e5fda606cb5bfe7dd7d4110380 376 PIRSF PIRSF015658 1 376 7.9E-179 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VS_2568 f27f53e5fda606cb5bfe7dd7d4110380 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 2.0E-170 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VS_2568 f27f53e5fda606cb5bfe7dd7d4110380 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 5.5E-159 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VS_1779 49778c7ca1852d251989067cdd1a6c97 149 SUPERFAMILY SSF158682 2 145 1.18E-29 T 14-10-2018 IPR029024 TerB-like VS_1779 49778c7ca1852d251989067cdd1a6c97 149 Pfam PF05099 Tellurite resistance protein TerB 15 142 6.9E-39 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VS_1779 49778c7ca1852d251989067cdd1a6c97 149 Gene3D G3DSA:1.10.3680.10 3 139 3.1E-18 T 14-10-2018 IPR029024 TerB-like VS_1497 92f81e348e240f6968fe95c113392e6c 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1497 92f81e348e240f6968fe95c113392e6c 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1497 92f81e348e240f6968fe95c113392e6c 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1497 92f81e348e240f6968fe95c113392e6c 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1497 92f81e348e240f6968fe95c113392e6c 675 Gene3D G3DSA:3.30.565.10 517 668 3.7E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1497 92f81e348e240f6968fe95c113392e6c 675 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 3.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1497 92f81e348e240f6968fe95c113392e6c 675 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 664 6.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1497 92f81e348e240f6968fe95c113392e6c 675 SUPERFAMILY SSF103190 92 306 4.12E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_1497 92f81e348e240f6968fe95c113392e6c 675 SUPERFAMILY SSF55874 502 662 3.01E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1497 92f81e348e240f6968fe95c113392e6c 675 SUPERFAMILY SSF47384 439 509 6.67E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1497 92f81e348e240f6968fe95c113392e6c 675 SMART SM00387 555 666 3.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1497 92f81e348e240f6968fe95c113392e6c 675 SMART SM00388 445 512 1.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1497 92f81e348e240f6968fe95c113392e6c 675 Gene3D G3DSA:1.10.287.130 437 510 6.1E-21 T 14-10-2018 VS_1497 92f81e348e240f6968fe95c113392e6c 675 Pfam PF17202 Single cache domain 3 201 313 1.1E-27 T 14-10-2018 IPR033463 Single cache domain 3 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 Gene3D G3DSA:3.40.50.720 1 279 4.3E-114 T 14-10-2018 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.477 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 Gene3D G3DSA:3.30.1370.170 294 377 2.5E-30 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 SUPERFAMILY SSF51735 93 257 2.66E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 Gene3D G3DSA:3.40.50.720 93 258 4.3E-114 T 14-10-2018 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 284 6.1E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 SUPERFAMILY SSF52283 3 132 1.38E-22 T 14-10-2018 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 257 3.6E-35 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 6.7E-29 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VS_0900 be5852fbd9ae9e25ae0f841b8e5bab11 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VS_3013 01edeee7f48e6c45d60ab01ec5096cd1 184 Gene3D G3DSA:3.40.1410.10 13 179 1.1E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_3013 01edeee7f48e6c45d60ab01ec5096cd1 184 Pfam PF04345 Chorismate lyase 16 183 3.7E-56 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VS_3013 01edeee7f48e6c45d60ab01ec5096cd1 184 SUPERFAMILY SSF64288 14 179 5.65E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_3013 01edeee7f48e6c45d60ab01ec5096cd1 184 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 179 23.853 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VS_II0359 98d8d571636b0e01a4b5cae04cd10cf2 102 Pfam PF14375 Cysteine-rich CWC 53 97 1.3E-5 T 14-10-2018 IPR032720 Cysteine-rich CWC VS_II0359 98d8d571636b0e01a4b5cae04cd10cf2 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 1.3E-15 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VS_0632 d591a8fa8ae5245c168deb9c2cec301d 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VS_0632 d591a8fa8ae5245c168deb9c2cec301d 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 177 8.1E-36 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VS_2982 276982838526656cacdba2ca1a3bb386 446 PIRSF PIRSF000850 2 446 8.4E-215 T 14-10-2018 VS_2982 276982838526656cacdba2ca1a3bb386 446 SMART SM00155 347 374 0.019 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VS_2982 276982838526656cacdba2ca1a3bb386 446 SMART SM00155 126 152 0.011 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VS_2982 276982838526656cacdba2ca1a3bb386 446 Gene3D G3DSA:3.30.870.10 18 225 9.3E-165 T 14-10-2018 VS_2982 276982838526656cacdba2ca1a3bb386 446 SUPERFAMILY SSF56024 7 183 8.24E-24 T 14-10-2018 VS_2982 276982838526656cacdba2ca1a3bb386 446 Pfam PF13091 PLD-like domain 252 402 1.6E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VS_2982 276982838526656cacdba2ca1a3bb386 446 Gene3D G3DSA:3.30.870.10 12 442 9.3E-165 T 14-10-2018 VS_2982 276982838526656cacdba2ca1a3bb386 446 SUPERFAMILY SSF56024 197 421 1.28E-26 T 14-10-2018 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 PRINTS PR00116 Arginase signature 150 165 3.0E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 PRINTS PR00116 Arginase signature 277 306 3.0E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 TIGRFAM TIGR01227 hutG: formimidoylglutamase 36 351 6.0E-109 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 Gene3D G3DSA:3.40.800.10 27 357 1.3E-125 T 14-10-2018 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 PIRSF PIRSF036979 47 357 2.3E-35 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 Hamap MF_00737 Formimidoylglutamase [hutG]. 31 352 40.994 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 Pfam PF00491 Arginase family 71 350 7.5E-63 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VS_1218 b48bc444475ab4cf7378f535a4de9389 357 SUPERFAMILY SSF52768 35 355 9.71E-86 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VS_1218 b48bc444475ab4cf7378f535a4de9389 357 ProSitePatterns PS01053 Arginase family signature. 280 301 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VS_0127 225bd1d7d7c9c023ae5bb731adeb0610 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 2.2E-50 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VS_0127 225bd1d7d7c9c023ae5bb731adeb0610 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.131 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VS_0127 225bd1d7d7c9c023ae5bb731adeb0610 144 SUPERFAMILY SSF69500 2 143 1.44E-52 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VS_0127 225bd1d7d7c9c023ae5bb731adeb0610 144 Gene3D G3DSA:3.50.80.10 1 144 4.5E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VS_0127 225bd1d7d7c9c023ae5bb731adeb0610 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.4E-60 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VS_1121 d29e2836530518a8f2b77f80c4e6a706 660 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 156 4.4E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_1121 d29e2836530518a8f2b77f80c4e6a706 660 SUPERFAMILY SSF56935 27 660 8.06E-85 T 14-10-2018 VS_1121 d29e2836530518a8f2b77f80c4e6a706 660 Gene3D G3DSA:2.40.170.20 35 660 9.2E-88 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_0251 4d790fba8c206544dca632592557fca3 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 590 1.2E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0251 4d790fba8c206544dca632592557fca3 626 Gene3D G3DSA:1.10.287.950 295 626 6.6E-72 T 14-10-2018 VS_0251 4d790fba8c206544dca632592557fca3 626 Pfam PF00672 HAMP domain 296 344 1.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0251 4d790fba8c206544dca632592557fca3 626 Pfam PF02743 Cache domain 39 258 9.2E-27 T 14-10-2018 IPR033479 Double Cache domain 1 VS_0251 4d790fba8c206544dca632592557fca3 626 SUPERFAMILY SSF103190 69 176 1.96E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_0251 4d790fba8c206544dca632592557fca3 626 Gene3D G3DSA:3.30.450.20 64 167 5.7E-58 T 14-10-2018 VS_0251 4d790fba8c206544dca632592557fca3 626 SMART SM00283 364 625 2.6E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0251 4d790fba8c206544dca632592557fca3 626 SUPERFAMILY SSF58104 317 626 1.31E-77 T 14-10-2018 VS_0251 4d790fba8c206544dca632592557fca3 626 Gene3D G3DSA:3.30.450.20 52 269 5.7E-58 T 14-10-2018 VS_0251 4d790fba8c206544dca632592557fca3 626 SMART SM00304 295 349 2.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0251 4d790fba8c206544dca632592557fca3 626 SMART SM00304 384 451 57.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_2084 16b70e1c48ebfa372d17fb6f0a3afde9 487 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 409 1.2E-57 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2084 16b70e1c48ebfa372d17fb6f0a3afde9 487 PIRSF PIRSF006603 1 446 1.5E-78 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2084 16b70e1c48ebfa372d17fb6f0a3afde9 487 Pfam PF01554 MatE 29 184 1.4E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2084 16b70e1c48ebfa372d17fb6f0a3afde9 487 Pfam PF01554 MatE 243 403 1.1E-17 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1900 843c05dbd7be8b16be60d355db411889 76 SUPERFAMILY SSF52833 4 73 6.54E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1900 843c05dbd7be8b16be60d355db411889 76 Pfam PF00462 Glutaredoxin 6 64 8.9E-14 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VS_1900 843c05dbd7be8b16be60d355db411889 76 Gene3D G3DSA:3.40.30.10 4 76 9.0E-25 T 14-10-2018 VS_1900 843c05dbd7be8b16be60d355db411889 76 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 6 75 9.0E-28 T 14-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 Gene3D G3DSA:1.20.5.440 97 140 2.9E-12 T 14-10-2018 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 95 138 3.4E-9 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 8 137 19.221 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 138 2.0E-36 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 90 3.5E-24 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 SUPERFAMILY SSF51344 8 92 6.41E-21 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 SUPERFAMILY SSF46604 94 141 1.26E-10 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 15 93 2.0E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0915 8e12ce2d57a040c45a00f946875d21cd 147 Gene3D G3DSA:2.60.15.10 8 96 8.4E-26 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II1403 0c3d6e0241ad366946c5bcd0939f004d 382 Gene3D G3DSA:3.40.640.10 60 273 5.3E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II1403 0c3d6e0241ad366946c5bcd0939f004d 382 SUPERFAMILY SSF53383 3 381 1.24E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II1403 0c3d6e0241ad366946c5bcd0939f004d 382 Gene3D G3DSA:3.90.1150.10 15 379 5.3E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II1403 0c3d6e0241ad366946c5bcd0939f004d 382 Pfam PF00155 Aminotransferase class I and II 27 375 5.2E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_II0553 9d69f02f175b4319f38e35436a34ef81 126 Pfam PF13564 DoxX-like family 12 116 1.2E-18 T 14-10-2018 IPR032808 DoxX family VS_0336 736dd71de721802fc300354908851e67 183 Gene3D G3DSA:3.30.700.10 18 76 4.4E-5 T 14-10-2018 VS_0336 736dd71de721802fc300354908851e67 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 38 6.2E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0336 736dd71de721802fc300354908851e67 183 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 37 1.7E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0336 736dd71de721802fc300354908851e67 183 SUPERFAMILY SSF54523 18 71 7.06E-8 T 14-10-2018 VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 557 590 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 3.2E-15 T 14-10-2018 IPR005644 NolW-like VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 4.4E-9 T 14-10-2018 IPR005644 NolW-like VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 Pfam PF03958 Bacterial type II/III secretion system short domain 267 344 7.1E-19 T 14-10-2018 IPR005644 NolW-like VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 621 8.3E-159 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 599 613 7.7E-37 T 14-10-2018 IPR001775 GspD/PilQ family VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 7.7E-37 T 14-10-2018 IPR001775 GspD/PilQ family VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 7.7E-37 T 14-10-2018 IPR001775 GspD/PilQ family VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 470 7.7E-37 T 14-10-2018 IPR001775 GspD/PilQ family VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 594 7.7E-37 T 14-10-2018 IPR001775 GspD/PilQ family VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR01032 Gene IV protein signature 471 494 3.1E-12 T 14-10-2018 VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR01032 Gene IV protein signature 592 614 3.1E-12 T 14-10-2018 VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 PRINTS PR01032 Gene IV protein signature 539 567 3.1E-12 T 14-10-2018 VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 Gene3D G3DSA:3.30.1370.120 189 259 1.1E-20 T 14-10-2018 IPR038591 NolW-like superfamily VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 Gene3D G3DSA:3.30.1370.120 21 186 1.8E-51 T 14-10-2018 IPR038591 NolW-like superfamily VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 Pfam PF00263 Bacterial type II and III secretion system protein 450 612 4.0E-51 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VS_0135 1a2707eebb1c4d237f8fd983131fca2f 674 Gene3D G3DSA:3.30.1370.120 264 342 4.7E-17 T 14-10-2018 IPR038591 NolW-like superfamily VS_1917 a52940c489c507a7b9a087545f14683f 219 SMART SM00849 16 196 5.4E-37 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_1917 a52940c489c507a7b9a087545f14683f 219 SUPERFAMILY SSF56281 7 212 1.76E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_1917 a52940c489c507a7b9a087545f14683f 219 Gene3D G3DSA:3.60.15.10 5 214 4.8E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_1917 a52940c489c507a7b9a087545f14683f 219 Pfam PF00753 Metallo-beta-lactamase superfamily 16 196 2.0E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_2763 834b2d0321f394d4d99c48571e05f369 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.1E-62 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VS_2763 834b2d0321f394d4d99c48571e05f369 447 Gene3D G3DSA:3.30.2290.10 3 233 1.7E-81 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VS_2763 834b2d0321f394d4d99c48571e05f369 447 SUPERFAMILY SSF111283 14 447 8.24E-129 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VS_2267 4219653ac38995ee3e6041de5763b39a 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 317 4.2E-103 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VS_2267 4219653ac38995ee3e6041de5763b39a 320 SUPERFAMILY SSF53800 4 317 8.76E-102 T 14-10-2018 VS_2267 4219653ac38995ee3e6041de5763b39a 320 Gene3D G3DSA:3.40.50.1400 8 317 1.9E-92 T 14-10-2018 VS_2267 4219653ac38995ee3e6041de5763b39a 320 Gene3D G3DSA:3.40.50.1400 163 301 1.9E-92 T 14-10-2018 VS_2267 4219653ac38995ee3e6041de5763b39a 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 37.471 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VS_2267 4219653ac38995ee3e6041de5763b39a 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VS_2267 4219653ac38995ee3e6041de5763b39a 320 Pfam PF00762 Ferrochelatase 6 317 7.8E-109 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 SMART SM00487 17 288 0.0023 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 SMART SM00491 477 606 6.9E-45 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 SUPERFAMILY SSF52540 14 235 3.26E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 Pfam PF04851 Type III restriction enzyme, res subunit 19 236 4.0E-5 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 SUPERFAMILY SSF52540 42 602 6.76E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 Gene3D G3DSA:3.40.50.300 445 635 3.6E-37 T 14-10-2018 VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 Gene3D G3DSA:3.40.50.300 19 284 1.3E-48 T 14-10-2018 VS_2226 c4e343c55318bf4363d2807e37f8aef2 642 Pfam PF13307 Helicase C-terminal domain 462 619 1.7E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 SUPERFAMILY SSF109604 679 762 1.44E-7 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 302 516 3.6E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 SUPERFAMILY SSF53850 301 518 8.33E-33 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Gene3D G3DSA:3.40.190.10 290 514 2.7E-46 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Gene3D G3DSA:3.30.450.20 229 269 1.7E-8 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Gene3D G3DSA:1.10.3210.10 890 1036 2.4E-22 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Gene3D G3DSA:1.10.3210.10 663 770 8.9E-19 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 SUPERFAMILY SSF109604 911 1023 1.04E-6 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 SMART SM00062 294 518 0.0052 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Pfam PF13487 HD domain 911 976 2.7E-19 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Gene3D G3DSA:3.40.190.10 379 477 2.7E-46 T 14-10-2018 VS_1341 2e6ae5ef19305aea06e7cf270a65e13c 1057 Gene3D G3DSA:3.30.450.20 65 228 1.7E-8 T 14-10-2018 VS_2405 8dbe53367f759a185226caf4d5dd5de5 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VS_2405 8dbe53367f759a185226caf4d5dd5de5 294 Pfam PF00348 Polyprenyl synthetase 28 269 4.5E-57 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VS_2405 8dbe53367f759a185226caf4d5dd5de5 294 SUPERFAMILY SSF48576 6 285 2.88E-83 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VS_2405 8dbe53367f759a185226caf4d5dd5de5 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VS_2405 8dbe53367f759a185226caf4d5dd5de5 294 Gene3D G3DSA:1.10.600.10 1 294 1.3E-109 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VS_1867 87b232f06dc2dc186ec912a0a91de34a 95 Pfam PF02627 Carboxymuconolactone decarboxylase family 7 79 2.8E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VS_1867 87b232f06dc2dc186ec912a0a91de34a 95 SUPERFAMILY SSF69118 6 86 5.76E-15 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VS_1867 87b232f06dc2dc186ec912a0a91de34a 95 Gene3D G3DSA:1.20.1290.10 4 88 1.0E-12 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VS_0169 288f22f916a27ef2696cf689f9c4ea89 317 Gene3D G3DSA:3.20.20.70 1 317 3.5E-142 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0169 288f22f916a27ef2696cf689f9c4ea89 317 TIGRFAM TIGR00874 talAB: transaldolase 2 317 4.9E-156 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_0169 288f22f916a27ef2696cf689f9c4ea89 317 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_0169 288f22f916a27ef2696cf689f9c4ea89 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 313 1.2E-98 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_0169 288f22f916a27ef2696cf689f9c4ea89 317 Hamap MF_00492 Transaldolase [tal]. 1 317 51.016 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_0169 288f22f916a27ef2696cf689f9c4ea89 317 SUPERFAMILY SSF51569 1 316 2.2E-112 T 14-10-2018 VS_0169 288f22f916a27ef2696cf689f9c4ea89 317 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VS_II1125 62ce4d08a8fb432b301892d1ce7a9c28 368 Gene3D G3DSA:1.10.3470.10 41 368 2.6E-84 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II1125 62ce4d08a8fb432b301892d1ce7a9c28 368 SUPERFAMILY SSF81345 43 366 6.41E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II1125 62ce4d08a8fb432b301892d1ce7a9c28 368 Pfam PF01032 FecCD transport family 64 365 5.0E-82 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II0576 8e694caa3ed9fcadeb0f250e68d76418 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 6.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0576 8e694caa3ed9fcadeb0f250e68d76418 457 SUPERFAMILY SSF55874 325 446 8.08E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0576 8e694caa3ed9fcadeb0f250e68d76418 457 SMART SM00388 257 320 8.7E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0576 8e694caa3ed9fcadeb0f250e68d76418 457 Gene3D G3DSA:1.10.287.130 194 316 3.6E-11 T 14-10-2018 VS_II0576 8e694caa3ed9fcadeb0f250e68d76418 457 Gene3D G3DSA:3.30.565.10 323 414 1.0E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0576 8e694caa3ed9fcadeb0f250e68d76418 457 SUPERFAMILY SSF47384 241 319 1.47E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 Gene3D G3DSA:3.40.50.300 1 238 3.8E-75 T 14-10-2018 VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 Gene3D G3DSA:2.40.50.100 239 361 2.2E-48 T 14-10-2018 VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 Gene3D G3DSA:2.40.50.140 287 344 2.2E-48 T 14-10-2018 VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 SMART SM00382 28 211 5.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 Pfam PF08402 TOBE domain 281 353 1.3E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 Pfam PF00005 ABC transporter 20 161 1.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 SUPERFAMILY SSF50331 236 364 4.62E-31 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 SUPERFAMILY SSF52540 4 244 3.9E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0219 d83fb3251a6f19b18bdbf08845b16944 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 SUPERFAMILY SSF81324 32 245 1.24E-53 T 14-10-2018 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 Gene3D G3DSA:1.10.287.70 33 247 9.8E-58 T 14-10-2018 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 Pfam PF00520 Ion transport protein 34 245 1.1E-31 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 PRINTS PR00169 Potassium channel signature 188 210 5.3E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 PRINTS PR00169 Potassium channel signature 26 54 5.3E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 PRINTS PR00169 Potassium channel signature 68 91 5.3E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 PRINTS PR00169 Potassium channel signature 94 114 5.3E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 PRINTS PR00169 Potassium channel signature 159 182 5.3E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 PRINTS PR00169 Potassium channel signature 130 156 5.3E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0956 1573e257089502e4d349a6c4c20ccbc8 290 PRINTS PR00169 Potassium channel signature 217 243 5.3E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VS_0334 65e914f11df61d99b1b7c5af2c540480 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 5.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0334 65e914f11df61d99b1b7c5af2c540480 191 SUPERFAMILY SSF54523 8 114 1.73E-12 T 14-10-2018 VS_0334 65e914f11df61d99b1b7c5af2c540480 191 Gene3D G3DSA:3.30.700.10 8 190 8.4E-9 T 14-10-2018 VS_0334 65e914f11df61d99b1b7c5af2c540480 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.9E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0334 65e914f11df61d99b1b7c5af2c540480 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_2165 a988c05f0fb3e53478c326135ddea552 148 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 38 139 2.7E-41 T 14-10-2018 IPR039366 YscW/ExsB VS_0091 61477e3cffb23ed7f260e5a7d8d443d3 175 Pfam PF00210 Ferritin-like domain 8 143 1.7E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VS_0091 61477e3cffb23ed7f260e5a7d8d443d3 175 SUPERFAMILY SSF47240 1 159 3.05E-58 T 14-10-2018 IPR009078 Ferritin-like superfamily VS_0091 61477e3cffb23ed7f260e5a7d8d443d3 175 Gene3D G3DSA:1.20.1260.10 1 175 6.7E-53 T 14-10-2018 IPR012347 Ferritin-like VS_1001 ee2365a31ff82ee92a83f67b463e6842 488 SUPERFAMILY SSF103190 140 240 8.24E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_1001 ee2365a31ff82ee92a83f67b463e6842 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 485 9.2E-34 T 14-10-2018 IPR000160 GGDEF domain VS_1001 ee2365a31ff82ee92a83f67b463e6842 488 SMART SM00267 322 488 1.3E-33 T 14-10-2018 IPR000160 GGDEF domain VS_1001 ee2365a31ff82ee92a83f67b463e6842 488 Gene3D G3DSA:3.30.70.270 325 488 3.8E-42 T 14-10-2018 VS_1001 ee2365a31ff82ee92a83f67b463e6842 488 SUPERFAMILY SSF55073 338 488 4.79E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1001 ee2365a31ff82ee92a83f67b463e6842 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 487 4.4E-40 T 14-10-2018 IPR000160 GGDEF domain VS_1707 026f92757e897e68711a5a58f8f4533b 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 5.0E-59 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 SUPERFAMILY SSF55594 1 82 1.44E-26 T 14-10-2018 IPR035895 HPr-like superfamily VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 Gene3D G3DSA:3.30.1340.10 1 85 2.5E-32 T 14-10-2018 IPR035895 HPr-like superfamily VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.6E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.3E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.3E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.3E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.5E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VS_2290 cb721008c2d7bc8cffa2c434c3033730 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 Gene3D G3DSA:3.50.50.60 107 241 1.1E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 1.3E-15 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.3E-15 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 1.3E-15 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 1.3E-15 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 Gene3D G3DSA:3.30.390.120 321 383 1.3E-5 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 Gene3D G3DSA:3.50.50.60 5 277 1.1E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 281 3.2E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.0E-22 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 4.0E-22 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 4.0E-22 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 4.0E-22 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 4.0E-22 T 14-10-2018 VS_II1440 becb69662d1ec3b5d087a7427cdb62fe 389 SUPERFAMILY SSF51905 2 302 2.52E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_1030 430ebffbc57bdd521f6903e485b6dacc 321 Pfam PF13177 DNA polymerase III, delta subunit 12 163 2.4E-42 T 14-10-2018 VS_1030 430ebffbc57bdd521f6903e485b6dacc 321 Gene3D G3DSA:3.40.50.300 2 165 1.5E-48 T 14-10-2018 VS_1030 430ebffbc57bdd521f6903e485b6dacc 321 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 198 1.5E-55 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1030 430ebffbc57bdd521f6903e485b6dacc 321 SUPERFAMILY SSF52540 6 203 2.02E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1030 430ebffbc57bdd521f6903e485b6dacc 321 SUPERFAMILY SSF48019 218 320 1.05E-14 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VS_1030 430ebffbc57bdd521f6903e485b6dacc 321 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 212 315 5.1E-21 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 Gene3D G3DSA:3.40.50.2300 62 306 1.2E-79 T 14-10-2018 VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 SUPERFAMILY SSF47413 2 59 5.89E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 SMART SM00354 1 71 1.1E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 SUPERFAMILY SSF53822 61 330 9.42E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 4.1E-36 T 14-10-2018 VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 Gene3D G3DSA:1.10.260.40 1 59 2.6E-22 T 14-10-2018 VS_II1392 4f1572c5fd32a03c4b972438dfcfc43c 335 Gene3D G3DSA:3.40.50.2300 160 289 1.2E-79 T 14-10-2018 VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 SUPERFAMILY SSF52540 176 561 7.99E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 Gene3D G3DSA:3.30.450.90 153 291 3.1E-46 T 14-10-2018 VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 144 8.0E-16 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 8 562 7.0E-235 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 Gene3D G3DSA:3.30.300.160 62 143 3.7E-11 T 14-10-2018 VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 Gene3D G3DSA:3.40.50.300 292 563 3.2E-104 T 14-10-2018 VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 Pfam PF00437 Type II/IV secretion system protein 191 458 1.5E-87 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_2548 b3a6711e133edd06a589a163f13fcdc9 564 SUPERFAMILY SSF160246 4 143 4.45E-31 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VS_2181 9dc869d27bddbba925d616c4c0872ef1 196 SUPERFAMILY SSF46689 9 78 4.03E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2181 9dc869d27bddbba925d616c4c0872ef1 196 Pfam PF13305 WHG domain 92 172 4.8E-11 T 14-10-2018 IPR025996 WHG domain VS_2181 9dc869d27bddbba925d616c4c0872ef1 196 Gene3D G3DSA:1.10.357.10 1 192 6.5E-42 T 14-10-2018 VS_2181 9dc869d27bddbba925d616c4c0872ef1 196 SUPERFAMILY SSF48498 83 195 2.47E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_0481 f9b53a5ffbd12e6ea3adfb52a1f3fb2a 158 SUPERFAMILY SSF56925 47 158 6.51E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_0481 f9b53a5ffbd12e6ea3adfb52a1f3fb2a 158 PIRSF PIRSF028680 1 158 1.0E-57 T 14-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 Gene3D G3DSA:3.40.50.300 3 213 1.3E-60 T 14-10-2018 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 2.9E-41 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 4.9E-90 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.246 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 SUPERFAMILY SSF52540 6 204 6.8E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 PRINTS PR00988 Uridine kinase signature 178 191 1.1E-35 T 14-10-2018 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 PRINTS PR00988 Uridine kinase signature 142 152 1.1E-35 T 14-10-2018 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 PRINTS PR00988 Uridine kinase signature 156 167 1.1E-35 T 14-10-2018 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 PRINTS PR00988 Uridine kinase signature 86 101 1.1E-35 T 14-10-2018 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 PRINTS PR00988 Uridine kinase signature 41 52 1.1E-35 T 14-10-2018 VS_1011 5a03c80781ed27cbfaddbc5ff8d7ef7e 213 PRINTS PR00988 Uridine kinase signature 7 24 1.1E-35 T 14-10-2018 VS_1412 6dae43df5351745f1facd3d69c77124f 885 Pfam PF02470 MlaD protein 283 373 1.5E-7 T 14-10-2018 IPR003399 Mce/MlaD VS_1412 6dae43df5351745f1facd3d69c77124f 885 Pfam PF02470 MlaD protein 165 223 1.9E-6 T 14-10-2018 IPR003399 Mce/MlaD VS_1412 6dae43df5351745f1facd3d69c77124f 885 Pfam PF02470 MlaD protein 47 137 4.8E-13 T 14-10-2018 IPR003399 Mce/MlaD VS_0215 1d73ce10e4378ec995663e1ba640a990 722 Pfam PF13807 G-rich domain on putative tyrosine kinase 370 450 2.8E-33 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VS_0215 1d73ce10e4378ec995663e1ba640a990 722 Gene3D G3DSA:3.40.50.300 443 722 2.0E-77 T 14-10-2018 VS_0215 1d73ce10e4378ec995663e1ba640a990 722 Pfam PF13614 AAA domain 539 652 9.5E-11 T 14-10-2018 IPR025669 AAA domain VS_0215 1d73ce10e4378ec995663e1ba640a990 722 Pfam PF02706 Chain length determinant protein 15 107 3.3E-20 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VS_0215 1d73ce10e4378ec995663e1ba640a990 722 SUPERFAMILY SSF52540 528 705 4.56E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0215 1d73ce10e4378ec995663e1ba640a990 722 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 510 713 7.1E-51 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VS_II0997 d6909084ae7927e1a54946b7a2cb6551 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 1.5E-55 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VS_II0997 d6909084ae7927e1a54946b7a2cb6551 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 2.7E-57 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VS_II0997 d6909084ae7927e1a54946b7a2cb6551 168 PIRSF PIRSF028301 1 168 1.9E-61 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VS_1797 48619bc9cf252cab4910e7a6b63942bc 561 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 380 542 8.0E-51 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VS_1797 48619bc9cf252cab4910e7a6b63942bc 561 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 68 339 1.6E-62 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VS_1797 48619bc9cf252cab4910e7a6b63942bc 561 PIRSF PIRSF001394 48 561 3.1E-217 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VS_1797 48619bc9cf252cab4910e7a6b63942bc 561 Pfam PF05681 Fumarate hydratase (Fumerase) 67 340 5.3E-99 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VS_1797 48619bc9cf252cab4910e7a6b63942bc 561 Gene3D G3DSA:3.20.130.10 363 545 7.7E-62 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VS_1797 48619bc9cf252cab4910e7a6b63942bc 561 Pfam PF05683 Fumarase C-terminus 344 545 4.0E-83 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VS_1797 48619bc9cf252cab4910e7a6b63942bc 561 SUPERFAMILY SSF117457 372 544 4.32E-63 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 Gene3D G3DSA:1.10.287.730 143 169 5.4E-10 T 14-10-2018 VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 5.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 5.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 5.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 5.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 5.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 Pfam PF01029 NusB family 1 123 1.6E-25 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 3.2E-67 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 Gene3D G3DSA:1.10.940.10 1 142 7.8E-43 T 14-10-2018 IPR035926 NusB-like superfamily VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 Gene3D G3DSA:3.30.70.1170 170 227 5.2E-25 T 14-10-2018 VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 Gene3D G3DSA:3.40.50.150 228 425 1.3E-67 T 14-10-2018 VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 SUPERFAMILY SSF48013 1 146 4.19E-35 T 14-10-2018 IPR035926 NusB-like superfamily VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 SUPERFAMILY SSF53335 138 424 6.14E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_3128 d322ecdae96a50bf50e1653b7626f1b3 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 2.7E-143 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.362 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 SUPERFAMILY SSF109604 309 495 1.3E-41 T 14-10-2018 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 Gene3D G3DSA:1.10.3210.10 306 496 9.3E-48 T 14-10-2018 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 Gene3D G3DSA:3.30.420.40 11 298 6.1E-81 T 14-10-2018 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 Gene3D G3DSA:3.30.420.150 114 291 6.1E-81 T 14-10-2018 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 Pfam PF02541 Ppx/GppA phosphatase family 23 304 4.0E-86 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 PIRSF PIRSF001267 1 496 4.2E-179 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 SUPERFAMILY SSF53067 9 129 2.49E-36 T 14-10-2018 VS_3074 37f9cb5636f6b09233d0a50bae2af251 497 SUPERFAMILY SSF53067 134 305 6.31E-41 T 14-10-2018 VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 PIRSF PIRSF001237 1 342 2.1E-142 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 Pfam PF01979 Amidohydrolase family 11 309 2.4E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 Gene3D G3DSA:3.20.20.140 3 342 4.8E-110 T 14-10-2018 VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.1E-139 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 SUPERFAMILY SSF51556 1 341 1.87E-145 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.252 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_II0272 784ff2d643e9c5aab108d263d54b0cd3 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VS_1325 94b025b29ceeaf97f6ae25ad731a7b92 874 Gene3D G3DSA:1.20.1250.20 473 857 1.6E-52 T 14-10-2018 VS_1325 94b025b29ceeaf97f6ae25ad731a7b92 874 Pfam PF07690 Major Facilitator Superfamily 513 799 2.6E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_1325 94b025b29ceeaf97f6ae25ad731a7b92 874 SUPERFAMILY SSF103473 477 859 1.1E-55 T 14-10-2018 IPR036259 MFS transporter superfamily VS_1325 94b025b29ceeaf97f6ae25ad731a7b92 874 ProSitePatterns PS00216 Sugar transport proteins signature 1. 535 552 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VS_0005 0c10afa337ed71dbddf1116074402346 121 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 VS_0005 0c10afa337ed71dbddf1116074402346 121 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 19 107 2.0E-43 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VS_0005 0c10afa337ed71dbddf1116074402346 121 Pfam PF00825 Ribonuclease P 9 115 1.3E-31 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VS_0005 0c10afa337ed71dbddf1116074402346 121 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 9 118 17.327 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VS_0005 0c10afa337ed71dbddf1116074402346 121 SUPERFAMILY SSF54211 9 117 1.11E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0005 0c10afa337ed71dbddf1116074402346 121 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 116 8.6E-27 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VS_0005 0c10afa337ed71dbddf1116074402346 121 Gene3D G3DSA:3.30.230.10 4 121 2.5E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 284 356 2.7E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 2.0E-59 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 Gene3D G3DSA:2.60.40.420 119 256 3.9E-81 T 14-10-2018 IPR008972 Cupredoxin VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 SUPERFAMILY SSF49503 115 315 1.16E-52 T 14-10-2018 IPR008972 Cupredoxin VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 29 108 2.0E-14 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 SUPERFAMILY SSF81464 27 117 2.29E-25 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 Gene3D G3DSA:1.10.287.90 47 118 3.9E-81 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 Gene3D G3DSA:1.10.760.10 263 389 2.4E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 2.7E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 4.1E-39 T 14-10-2018 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 4.1E-39 T 14-10-2018 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 4.1E-39 T 14-10-2018 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 4.1E-39 T 14-10-2018 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 4.1E-39 T 14-10-2018 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 4.1E-39 T 14-10-2018 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 4.1E-39 T 14-10-2018 VS_II0365 ef1388ff6f16b7de5014348818cdc2d8 419 SUPERFAMILY SSF46626 262 371 7.09E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0231 2d26cae5865c8b2c35877a611142eea7 604 Gene3D G3DSA:3.30.70.100 443 540 1.6E-6 T 14-10-2018 VS_II0231 2d26cae5865c8b2c35877a611142eea7 604 SUPERFAMILY SSF82861 292 375 4.97E-9 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VS_II0231 2d26cae5865c8b2c35877a611142eea7 604 SUPERFAMILY SSF50182 378 442 5.56E-12 T 14-10-2018 IPR010920 LSM domain superfamily VS_II0231 2d26cae5865c8b2c35877a611142eea7 604 Pfam PF00924 Mechanosensitive ion channel 340 535 7.4E-36 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VS_II0231 2d26cae5865c8b2c35877a611142eea7 604 Gene3D G3DSA:2.30.30.60 394 442 9.2E-9 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VS_II0231 2d26cae5865c8b2c35877a611142eea7 604 SUPERFAMILY SSF82689 444 542 1.7E-7 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VS_1718 5cbef07fd75680111418aea8b2b70efb 217 PIRSF PIRSF023956 1 217 4.1E-74 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VS_1718 5cbef07fd75680111418aea8b2b70efb 217 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 3.5E-74 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VS_1718 5cbef07fd75680111418aea8b2b70efb 217 SUPERFAMILY SSF53335 2 214 1.24E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1718 5cbef07fd75680111418aea8b2b70efb 217 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 36.081 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VS_1718 5cbef07fd75680111418aea8b2b70efb 217 Gene3D G3DSA:3.40.50.150 1 216 9.8E-62 T 14-10-2018 VS_1718 5cbef07fd75680111418aea8b2b70efb 217 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.3E-80 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 SUPERFAMILY SSF46785 3 85 1.58E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 Pfam PF03466 LysR substrate binding domain 88 273 1.5E-17 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 SUPERFAMILY SSF53850 87 290 6.98E-23 T 14-10-2018 VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 Gene3D G3DSA:3.40.190.290 93 297 1.3E-52 T 14-10-2018 VS_II1081 b57e29a3037c92e70f9d39a24f9ad57f 300 Gene3D G3DSA:1.10.10.10 2 86 2.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0371 58ff36bd0b884e1977453023be6b7f21 338 SUPERFAMILY SSF53659 13 336 9.7E-112 T 14-10-2018 VS_0371 58ff36bd0b884e1977453023be6b7f21 338 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 12 337 35.776 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VS_0371 58ff36bd0b884e1977453023be6b7f21 338 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 14 333 1.4E-126 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VS_0371 58ff36bd0b884e1977453023be6b7f21 338 Gene3D G3DSA:3.40.718.10 10 338 4.3E-122 T 14-10-2018 VS_0371 58ff36bd0b884e1977453023be6b7f21 338 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 41 330 8.5E-106 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VS_II1519 031ba8ade32dca5b471c156859c9b3ac 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 5.4E-39 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VS_II1519 031ba8ade32dca5b471c156859c9b3ac 345 SUPERFAMILY SSF56529 83 340 2.14E-54 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VS_II1519 031ba8ade32dca5b471c156859c9b3ac 345 Gene3D G3DSA:3.90.850.10 1 345 8.5E-132 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VS_0691 1f721052c8726d22745ee6a8b869ba3c 383 SUPERFAMILY SSF53335 188 349 2.31E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0691 1f721052c8726d22745ee6a8b869ba3c 383 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.295 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VS_0691 1f721052c8726d22745ee6a8b869ba3c 383 Pfam PF08468 Methyltransferase small domain N-terminal 47 160 8.9E-6 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VS_0691 1f721052c8726d22745ee6a8b869ba3c 383 PIRSF PIRSF037565 1 377 1.0E-166 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VS_0691 1f721052c8726d22745ee6a8b869ba3c 383 Gene3D G3DSA:3.40.50.150 9 180 7.2E-49 T 14-10-2018 VS_0691 1f721052c8726d22745ee6a8b869ba3c 383 Gene3D G3DSA:3.40.50.150 187 381 9.8E-48 T 14-10-2018 VS_0691 1f721052c8726d22745ee6a8b869ba3c 383 Pfam PF05175 Methyltransferase small domain 200 373 1.5E-51 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 Pfam PF01578 Cytochrome C assembly protein 89 297 6.3E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.7E-257 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 7.3E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 7.3E-126 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.7E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.7E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.7E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.7E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.7E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.7E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0855 f32518f7e4ae1ccdb039df5a58c6845c 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.7E-61 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1303 c2ad74d05e3cdf169f99c424afba5f65 231 Gene3D G3DSA:3.40.50.2300 5 144 1.4E-27 T 14-10-2018 VS_1303 c2ad74d05e3cdf169f99c424afba5f65 231 PIRSF PIRSF006171 3 231 9.9E-81 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VS_1303 c2ad74d05e3cdf169f99c424afba5f65 231 Pfam PF12431 Transcriptional regulator 134 163 1.4E-7 T 14-10-2018 IPR028141 Transcriptional regulator VS_1303 c2ad74d05e3cdf169f99c424afba5f65 231 SMART SM00448 5 118 1.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1303 c2ad74d05e3cdf169f99c424afba5f65 231 Pfam PF00072 Response regulator receiver domain 7 118 6.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1303 c2ad74d05e3cdf169f99c424afba5f65 231 SUPERFAMILY SSF52172 6 139 7.97E-32 T 14-10-2018 IPR011006 CheY-like superfamily VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 1.1E-201 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 86.223 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 PIRSF PIRSF000110 2 490 6.5E-180 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 SUPERFAMILY SSF55347 182 490 3.2E-114 T 14-10-2018 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 Gene3D G3DSA:3.40.50.720 5 180 1.6E-60 T 14-10-2018 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 3.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 3.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 3.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 3.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 3.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 SUPERFAMILY SSF51735 4 195 4.33E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 4.8E-115 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 Gene3D G3DSA:3.30.360.10 181 489 8.7E-125 T 14-10-2018 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_1304 9d3dfcb7169ca12f87aa9dfa99398f31 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 5.7E-65 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VS_0591 ebcfe9a52036ebb312be46309a02f143 309 Gene3D G3DSA:1.10.10.10 1 91 9.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0591 ebcfe9a52036ebb312be46309a02f143 309 Gene3D G3DSA:3.40.190.10 174 272 7.6E-19 T 14-10-2018 VS_0591 ebcfe9a52036ebb312be46309a02f143 309 Pfam PF03466 LysR substrate binding domain 98 253 7.6E-7 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0591 ebcfe9a52036ebb312be46309a02f143 309 Gene3D G3DSA:3.40.190.10 93 299 7.6E-19 T 14-10-2018 VS_0591 ebcfe9a52036ebb312be46309a02f143 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0591 ebcfe9a52036ebb312be46309a02f143 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0591 ebcfe9a52036ebb312be46309a02f143 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0591 ebcfe9a52036ebb312be46309a02f143 309 SUPERFAMILY SSF46785 7 87 1.36E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0591 ebcfe9a52036ebb312be46309a02f143 309 SUPERFAMILY SSF53850 93 301 1.71E-15 T 14-10-2018 VS_0591 ebcfe9a52036ebb312be46309a02f143 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 8.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0398 3edd716b0f355d4da919347aa7294d69 369 Pfam PF00266 Aminotransferase class-V 39 318 7.6E-29 T 14-10-2018 IPR000192 Aminotransferase class V domain VS_II0398 3edd716b0f355d4da919347aa7294d69 369 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 8 364 3.3E-166 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VS_II0398 3edd716b0f355d4da919347aa7294d69 369 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 369 208.707 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VS_II0398 3edd716b0f355d4da919347aa7294d69 369 Gene3D G3DSA:3.90.1150.10 10 355 3.1E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0398 3edd716b0f355d4da919347aa7294d69 369 SUPERFAMILY SSF53383 5 364 2.28E-85 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0398 3edd716b0f355d4da919347aa7294d69 369 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 5 366 1.1E-195 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VS_II0398 3edd716b0f355d4da919347aa7294d69 369 Gene3D G3DSA:3.40.640.10 18 264 3.1E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0398 3edd716b0f355d4da919347aa7294d69 369 PIRSF PIRSF000524 1 366 7.2E-59 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VS_II0198 d0f0c107aa9c3b1559a8ab1506b6bd0e 300 SMART SM00257 35 79 2.0E-4 T 14-10-2018 IPR018392 LysM domain VS_II0198 d0f0c107aa9c3b1559a8ab1506b6bd0e 300 SUPERFAMILY SSF141523 88 226 1.28E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VS_II0198 d0f0c107aa9c3b1559a8ab1506b6bd0e 300 SUPERFAMILY SSF54106 34 79 5.62E-6 T 14-10-2018 VS_II0198 d0f0c107aa9c3b1559a8ab1506b6bd0e 300 Gene3D G3DSA:2.40.440.10 15 294 1.1E-83 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VS_II0198 d0f0c107aa9c3b1559a8ab1506b6bd0e 300 Pfam PF01476 LysM domain 36 79 2.3E-6 T 14-10-2018 IPR018392 LysM domain VS_II0198 d0f0c107aa9c3b1559a8ab1506b6bd0e 300 Pfam PF03734 L,D-transpeptidase catalytic domain 90 226 1.5E-21 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VS_0667 cf84b408b290c7ad2c193ec066f0da76 213 Pfam PF01914 MarC family integral membrane protein 8 207 1.6E-51 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VS_0667 cf84b408b290c7ad2c193ec066f0da76 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 204 2.8E-48 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 Gene3D G3DSA:1.10.10.10 25 111 2.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 Gene3D G3DSA:3.40.190.10 185 286 2.7E-56 T 14-10-2018 VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 62 6.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 73 6.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 85 4.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 Pfam PF03466 LysR substrate binding domain 110 317 8.7E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 SUPERFAMILY SSF53850 111 320 3.98E-39 T 14-10-2018 VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 SUPERFAMILY SSF46785 19 132 5.79E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0434 36ad6ca9402e92e59a93e1415340a57d 326 Gene3D G3DSA:3.40.190.10 114 314 2.7E-56 T 14-10-2018 VS_II0862 95eb8c22db819f8cbc7bef0ab6b16b27 712 Pfam PF00664 ABC transporter transmembrane region 174 418 9.5E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0862 95eb8c22db819f8cbc7bef0ab6b16b27 712 SUPERFAMILY SSF52540 463 709 1.9E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0862 95eb8c22db819f8cbc7bef0ab6b16b27 712 SMART SM00382 511 696 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0862 95eb8c22db819f8cbc7bef0ab6b16b27 712 SUPERFAMILY SSF90123 160 465 1.83E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0862 95eb8c22db819f8cbc7bef0ab6b16b27 712 Gene3D G3DSA:1.20.1560.10 160 470 1.2E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0862 95eb8c22db819f8cbc7bef0ab6b16b27 712 Gene3D G3DSA:3.40.50.300 474 712 3.1E-34 T 14-10-2018 VS_II0862 95eb8c22db819f8cbc7bef0ab6b16b27 712 Pfam PF00005 ABC transporter 502 650 1.6E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2119 1fae4868f5e3fd1b78eaaa4144e9c5cb 175 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VS_2119 1fae4868f5e3fd1b78eaaa4144e9c5cb 175 Gene3D G3DSA:3.40.30.10 36 168 1.5E-19 T 14-10-2018 VS_2119 1fae4868f5e3fd1b78eaaa4144e9c5cb 175 Pfam PF13905 Thioredoxin-like 69 150 1.4E-9 T 14-10-2018 IPR012336 Thioredoxin-like fold VS_2119 1fae4868f5e3fd1b78eaaa4144e9c5cb 175 SUPERFAMILY SSF52833 46 163 5.91E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0712 ad8811c98de66c78a74ddbcefa3f1145 156 PIRSF PIRSF000368 1 156 5.4E-60 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VS_II0712 ad8811c98de66c78a74ddbcefa3f1145 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 4.9E-51 T 14-10-2018 VS_II0712 ad8811c98de66c78a74ddbcefa3f1145 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VS_II0712 ad8811c98de66c78a74ddbcefa3f1145 156 SUPERFAMILY SSF102114 10 121 1.57E-6 T 14-10-2018 VS_II0712 ad8811c98de66c78a74ddbcefa3f1145 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 4.5E-60 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VS_II0712 ad8811c98de66c78a74ddbcefa3f1145 156 Gene3D G3DSA:3.20.20.70 2 156 4.0E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0766 1ba1640e0c83f32ba8904fbdb584f770 203 Pfam PF09997 Predicted membrane protein (DUF2238) 47 182 2.3E-52 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VS_II0766 1ba1640e0c83f32ba8904fbdb584f770 203 PIRSF PIRSF020606 5 203 1.4E-79 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VS_1485 52025805d40774844b63b7a8d2be11e3 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VS_1485 52025805d40774844b63b7a8d2be11e3 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VS_1485 52025805d40774844b63b7a8d2be11e3 951 SUPERFAMILY SSF53706 60 650 2.62E-198 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1485 52025805d40774844b63b7a8d2be11e3 951 Gene3D G3DSA:2.40.40.20 767 951 2.9E-47 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 7.1E-53 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1485 52025805d40774844b63b7a8d2be11e3 951 SUPERFAMILY SSF50692 752 951 6.78E-38 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VS_1485 52025805d40774844b63b7a8d2be11e3 951 Gene3D G3DSA:3.40.50.740 126 617 7.2E-131 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 SMART SM00926 61 115 3.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1485 52025805d40774844b63b7a8d2be11e3 951 Gene3D G3DSA:3.40.228.10 195 394 7.2E-131 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 PIRSF PIRSF036643 781 950 1.2E-16 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 PIRSF PIRSF036643 13 582 4.1E-112 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 PIRSF PIRSF036643 640 677 47.0 T 14-10-2018 VS_1485 52025805d40774844b63b7a8d2be11e3 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 1.6E-19 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 PRINTS PR00207 Flagellin signature 95 114 3.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 PRINTS PR00207 Flagellin signature 56 73 3.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 PRINTS PR00207 Flagellin signature 130 153 3.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 Gene3D G3DSA:1.20.58.1830 24 52 9.5E-72 T 14-10-2018 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 Gene3D G3DSA:1.20.1330.10 64 196 9.5E-72 T 14-10-2018 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 Gene3D G3DSA:1.10.8.410 359 406 2.1E-20 T 14-10-2018 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 Pfam PF00669 Bacterial flagellin N-terminal helical region 24 160 1.7E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 SUPERFAMILY SSF64518 20 406 2.62E-98 T 14-10-2018 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 Pfam PF07196 Flagellin hook IN motif 213 268 5.8E-12 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 Gene3D G3DSA:1.20.1330.10 211 358 2.0E-21 T 14-10-2018 VS_0813 32bdf085bac443c12fcab4077fb0cce9 407 Pfam PF00700 Bacterial flagellin C-terminal helical region 322 406 2.2E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_II0889 dda75482c41c8482793ae74b59ee9539 343 SUPERFAMILY SSF53850 24 340 1.03E-42 T 14-10-2018 VS_II0889 dda75482c41c8482793ae74b59ee9539 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 4.5E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_II0889 dda75482c41c8482793ae74b59ee9539 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 4.5E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_II0889 dda75482c41c8482793ae74b59ee9539 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 4.5E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_II0889 dda75482c41c8482793ae74b59ee9539 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 116 132 4.5E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_II0889 dda75482c41c8482793ae74b59ee9539 343 Pfam PF13416 Bacterial extracellular solute-binding protein 73 311 1.0E-15 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_II0889 dda75482c41c8482793ae74b59ee9539 343 Gene3D G3DSA:3.40.190.10 28 312 1.7E-65 T 14-10-2018 VS_II0889 dda75482c41c8482793ae74b59ee9539 343 Gene3D G3DSA:3.40.190.10 125 337 1.7E-65 T 14-10-2018 VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 SMART SM00244 22 180 1.7E-60 T 14-10-2018 IPR001107 Band 7 domain VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 Pfam PF01145 SPFH domain / Band 7 family 26 195 2.7E-35 T 14-10-2018 IPR001107 Band 7 domain VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 Gene3D G3DSA:3.30.479.30 50 182 4.1E-43 T 14-10-2018 VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 PRINTS PR00721 Stomatin signature 175 196 1.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 PRINTS PR00721 Stomatin signature 156 174 1.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 PRINTS PR00721 Stomatin signature 132 155 1.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 PRINTS PR00721 Stomatin signature 112 129 1.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 PRINTS PR00721 Stomatin signature 77 98 1.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site VS_2281 4c0cd375d1269b6813058f434a1b6ece 309 SUPERFAMILY SSF117892 53 187 9.81E-42 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VS_0280 315b347d4f0599eb94fd957bac324b7f 137 SUPERFAMILY SSF54995 1 103 1.1E-37 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0280 315b347d4f0599eb94fd957bac324b7f 137 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.519 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VS_0280 315b347d4f0599eb94fd957bac324b7f 137 Gene3D G3DSA:3.30.70.60 1 92 6.4E-32 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VS_0280 315b347d4f0599eb94fd957bac324b7f 137 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 9.0E-37 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0280 315b347d4f0599eb94fd957bac324b7f 137 Pfam PF01250 Ribosomal protein S6 3 91 2.3E-27 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_II0954 b07908d005dc0beb0988f48016c1e33a 96 Pfam PF13665 Domain of unknown function (DUF4150) 4 60 7.0E-15 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_2518 01fc15f897d14fd307e57f965ac715a7 338 Pfam PF13343 Bacterial extracellular solute-binding protein 73 300 1.2E-16 T 14-10-2018 VS_2518 01fc15f897d14fd307e57f965ac715a7 338 PIRSF PIRSF002825 1 338 1.7E-98 T 14-10-2018 IPR026045 Ferric binding protein VS_2518 01fc15f897d14fd307e57f965ac715a7 338 Gene3D G3DSA:3.40.190.10 26 298 8.0E-125 T 14-10-2018 VS_2518 01fc15f897d14fd307e57f965ac715a7 338 Gene3D G3DSA:3.40.190.10 121 329 8.0E-125 T 14-10-2018 VS_2518 01fc15f897d14fd307e57f965ac715a7 338 SUPERFAMILY SSF53850 25 333 5.67E-74 T 14-10-2018 VS_0498 def2156ec8a661e157b430f94575df0a 125 Pfam PF01228 Glycine radical 16 106 6.0E-23 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VS_0498 def2156ec8a661e157b430f94575df0a 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VS_0498 def2156ec8a661e157b430f94575df0a 125 SUPERFAMILY SSF51998 64 124 2.52E-23 T 14-10-2018 VS_0498 def2156ec8a661e157b430f94575df0a 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 6.5E-68 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VS_0498 def2156ec8a661e157b430f94575df0a 125 Gene3D G3DSA:3.20.70.20 14 125 6.9E-25 T 14-10-2018 VS_0498 def2156ec8a661e157b430f94575df0a 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.822 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VS_0498 def2156ec8a661e157b430f94575df0a 125 PIRSF PIRSF000378 2 125 1.7E-53 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VS_2765 5198be7fc6b30e3a385dae98ec213353 235 SUPERFAMILY SSF52540 2 230 1.9E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2765 5198be7fc6b30e3a385dae98ec213353 235 SMART SM00382 25 207 2.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2765 5198be7fc6b30e3a385dae98ec213353 235 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2765 5198be7fc6b30e3a385dae98ec213353 235 Pfam PF00005 ABC transporter 20 158 7.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2765 5198be7fc6b30e3a385dae98ec213353 235 Gene3D G3DSA:3.40.50.300 2 232 8.6E-61 T 14-10-2018 VS_2765 5198be7fc6b30e3a385dae98ec213353 235 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 4 211 1.0E-98 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 VS_0811 77ef03b9a027a82579e77718b9c6c058 396 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.6E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VS_0811 77ef03b9a027a82579e77718b9c6c058 396 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 396 3.1E-94 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VS_0811 77ef03b9a027a82579e77718b9c6c058 396 Gene3D G3DSA:1.20.1330.10 259 372 8.3E-11 T 14-10-2018 VS_0811 77ef03b9a027a82579e77718b9c6c058 396 Gene3D G3DSA:1.20.1330.10 42 202 1.7E-32 T 14-10-2018 VS_0811 77ef03b9a027a82579e77718b9c6c058 396 SUPERFAMILY SSF64518 1 396 6.54E-68 T 14-10-2018 VS_II0007 bde583b1fcdfad37cf1c2f23be3ed92e 222 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 58 161 1.2E-13 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted VS_II0007 bde583b1fcdfad37cf1c2f23be3ed92e 222 Gene3D G3DSA:3.10.620.30 22 213 1.6E-72 T 14-10-2018 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 Pfam PF10396 GTP-binding protein TrmE N-terminus 19 133 4.2E-34 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 Gene3D G3DSA:3.30.1360.120 9 134 3.1E-38 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 24 467 7.5E-99 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 229 382 1.1E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 Gene3D G3DSA:3.40.50.300 230 395 2.4E-103 T 14-10-2018 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 281 296 7.8E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 232 252 7.8E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 SUPERFAMILY SSF116878 134 467 3.27E-52 T 14-10-2018 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 SUPERFAMILY SSF52540 84 385 4.51E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 18 467 32.802 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 Pfam PF12631 MnmE helical domain 136 464 5.9E-61 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 Gene3D G3DSA:1.20.120.430 135 467 2.4E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VS_0002 6c5bfc298c8ea69bcd34aaa9079846b1 467 Pfam PF01926 50S ribosome-binding GTPase 231 320 4.8E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_3085 58c2261b30b876636c98b2ed876c8591 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 2.8E-22 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane VS_2913 ba64218af65604a5b5159f5895c618b3 322 Gene3D G3DSA:3.40.50.460 145 254 8.7E-117 T 14-10-2018 VS_2913 ba64218af65604a5b5159f5895c618b3 322 Pfam PF00365 Phosphofructokinase 6 278 1.6E-109 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 Gene3D G3DSA:3.40.50.450 6 289 8.7E-117 T 14-10-2018 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 123 140 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 34 47 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 242 264 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 96 112 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 196 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 141 159 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 161 177 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 215 227 3.5E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 ProSitePatterns PS00433 Phosphofructokinase signature. 246 264 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 PIRSF PIRSF000532 3 322 9.9E-127 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VS_2913 ba64218af65604a5b5159f5895c618b3 322 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 6 302 7.2E-131 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VS_2913 ba64218af65604a5b5159f5895c618b3 322 SUPERFAMILY SSF53784 4 308 2.75E-111 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VS_2913 ba64218af65604a5b5159f5895c618b3 322 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 4 322 46.703 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VS_2457 65022e0eeeb1a50b109f273803a46c9e 782 Pfam PF07238 PilZ domain 470 561 1.5E-10 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VS_2457 65022e0eeeb1a50b109f273803a46c9e 782 Pfam PF07238 PilZ domain 145 233 2.3E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VS_2457 65022e0eeeb1a50b109f273803a46c9e 782 SUPERFAMILY SSF141371 466 555 4.84E-6 T 14-10-2018 VS_2457 65022e0eeeb1a50b109f273803a46c9e 782 SUPERFAMILY SSF141371 143 200 8.83E-5 T 14-10-2018 VS_2457 65022e0eeeb1a50b109f273803a46c9e 782 Gene3D G3DSA:2.40.10.220 143 260 2.7E-5 T 14-10-2018 VS_2457 65022e0eeeb1a50b109f273803a46c9e 782 Gene3D G3DSA:2.40.10.220 466 585 5.6E-7 T 14-10-2018 VS_II0075 540725330255a2d681139b197b431d85 483 Gene3D G3DSA:3.30.470.20 43 479 1.0E-107 T 14-10-2018 VS_II0075 540725330255a2d681139b197b431d85 483 Gene3D G3DSA:1.10.1080.10 55 351 1.0E-107 T 14-10-2018 IPR014042 Glutathione synthase, alpha-helical GO:0004363|GO:0005524|GO:0006750|GO:0016874 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VS_II0075 540725330255a2d681139b197b431d85 483 Gene3D G3DSA:3.30.1490.80 9 432 1.0E-107 T 14-10-2018 IPR014049 Glutathione synthase, N-terminal, eukaryotic GO:0004363|GO:0005524 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VS_II0075 540725330255a2d681139b197b431d85 483 SUPERFAMILY SSF52440 201 312 2.01E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_II0075 540725330255a2d681139b197b431d85 483 Pfam PF03199 Eukaryotic glutathione synthase 203 311 5.7E-20 T 14-10-2018 IPR004887 Glutathione synthase, substrate-binding domain GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VS_II0075 540725330255a2d681139b197b431d85 483 Gene3D G3DSA:3.30.1490.50 352 420 1.0E-107 T 14-10-2018 IPR014709 Glutathione synthase, C-terminal, eukaryotic KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VS_II0075 540725330255a2d681139b197b431d85 483 Gene3D G3DSA:3.40.50.1760 179 316 1.0E-107 T 14-10-2018 IPR037013 Glutathione synthase, substrate-binding domain superfamily GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VS_II0075 540725330255a2d681139b197b431d85 483 SUPERFAMILY SSF56059 7 481 2.12E-94 T 14-10-2018 VS_II0075 540725330255a2d681139b197b431d85 483 Pfam PF03917 Eukaryotic glutathione synthase, ATP binding domain 8 481 5.9E-66 T 14-10-2018 IPR005615 Glutathione synthase GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VS_II0075 540725330255a2d681139b197b431d85 483 PIRSF PIRSF001558 5 482 4.2E-80 T 14-10-2018 IPR005615 Glutathione synthase GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VS_II0157 6611038d807c615753b87e8271b1aae3 657 SMART SM00642 145 539 2.1E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0157 6611038d807c615753b87e8271b1aae3 657 SUPERFAMILY SSF51445 113 542 3.27E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0157 6611038d807c615753b87e8271b1aae3 657 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 3.4E-8 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VS_II0157 6611038d807c615753b87e8271b1aae3 657 Gene3D G3DSA:2.60.40.10 4 115 1.1E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0157 6611038d807c615753b87e8271b1aae3 657 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 637 2.2E-197 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 VS_II0157 6611038d807c615753b87e8271b1aae3 657 Gene3D G3DSA:3.20.20.80 116 550 6.3E-141 T 14-10-2018 VS_II0157 6611038d807c615753b87e8271b1aae3 657 SUPERFAMILY SSF51011 556 647 8.63E-14 T 14-10-2018 VS_II0157 6611038d807c615753b87e8271b1aae3 657 Gene3D G3DSA:2.60.40.1180 555 647 1.1E-5 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VS_II0157 6611038d807c615753b87e8271b1aae3 657 SUPERFAMILY SSF81296 7 124 3.64E-23 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_II0157 6611038d807c615753b87e8271b1aae3 657 Pfam PF00128 Alpha amylase, catalytic domain 199 253 2.9E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_0330 22bc823e524387fa1e9189c6573d1f8c 400 Gene3D G3DSA:1.25.40.10 192 393 4.5E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0330 22bc823e524387fa1e9189c6573d1f8c 400 SUPERFAMILY SSF48452 215 370 2.02E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0434 23869d51ec112a1eb1bec74cbf62fe81 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 1.7E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VS_0434 23869d51ec112a1eb1bec74cbf62fe81 211 SUPERFAMILY SSF52833 11 110 8.16E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0434 23869d51ec112a1eb1bec74cbf62fe81 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_0434 23869d51ec112a1eb1bec74cbf62fe81 211 Gene3D G3DSA:3.40.30.10 11 202 1.3E-77 T 14-10-2018 VS_0434 23869d51ec112a1eb1bec74cbf62fe81 211 Gene3D G3DSA:1.20.1050.10 89 193 1.3E-77 T 14-10-2018 VS_0434 23869d51ec112a1eb1bec74cbf62fe81 211 SUPERFAMILY SSF47616 82 208 4.55E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_2278 4c6ace6be874ee18964d5e8df4dac70c 304 SUPERFAMILY SSF51735 1 301 2.35E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2278 4c6ace6be874ee18964d5e8df4dac70c 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.1E-100 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 VS_2278 4c6ace6be874ee18964d5e8df4dac70c 304 Gene3D G3DSA:3.40.50.720 2 303 6.0E-72 T 14-10-2018 VS_2278 4c6ace6be874ee18964d5e8df4dac70c 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 7.1E-13 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 VS_2278 4c6ace6be874ee18964d5e8df4dac70c 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 220 1.3E-22 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VS_0522 01a212cffd2a416ce146c01e63124991 237 SMART SM00927 69 167 1.1E-63 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VS_0522 01a212cffd2a416ce146c01e63124991 237 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 237 151.836 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VS_0522 01a212cffd2a416ce146c01e63124991 237 Gene3D G3DSA:3.40.600.10 14 236 1.9E-55 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VS_0522 01a212cffd2a416ce146c01e63124991 237 Pfam PF02976 DNA mismatch repair enzyme MutH 69 167 1.3E-33 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VS_0522 01a212cffd2a416ce146c01e63124991 237 SUPERFAMILY SSF52980 17 236 4.66E-80 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VS_0522 01a212cffd2a416ce146c01e63124991 237 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 21 235 1.7E-101 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VS_1944 3016e60b5fdacf60812843129d9fdb94 170 Gene3D G3DSA:3.30.70.260 86 170 5.3E-12 T 14-10-2018 VS_1944 3016e60b5fdacf60812843129d9fdb94 170 PIRSF PIRSF028103 1 169 8.0E-38 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VS_1944 3016e60b5fdacf60812843129d9fdb94 170 Pfam PF13740 ACT domain 4 74 1.2E-10 T 14-10-2018 VS_1944 3016e60b5fdacf60812843129d9fdb94 170 SUPERFAMILY SSF55021 88 167 3.79E-9 T 14-10-2018 VS_2773 501ee97d10ae8c01413b1c187a67370f 120 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.4E-23 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VS_2773 501ee97d10ae8c01413b1c187a67370f 120 Gene3D G3DSA:3.10.490.10 4 120 2.3E-39 T 14-10-2018 VS_2773 501ee97d10ae8c01413b1c187a67370f 120 SUPERFAMILY SSF110857 3 115 6.54E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VS_1656 94ab4c8b175a91146b4ef133a2f31528 142 Gene3D G3DSA:3.10.450.430 2 142 9.0E-32 T 14-10-2018 VS_1656 94ab4c8b175a91146b4ef133a2f31528 142 Pfam PF10980 Protein of unknown function (DUF2787) 14 139 3.8E-42 T 14-10-2018 IPR021248 Protein of unknown function DUF2787 VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 Gene3D G3DSA:3.40.1410.10 71 228 1.0E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 SMART SM00866 86 225 1.5E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 SUPERFAMILY SSF46785 3 72 3.05E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 3.8E-111 T 14-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 1.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 SUPERFAMILY SSF64288 53 229 1.73E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 SMART SM00345 6 65 6.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 Gene3D G3DSA:1.10.10.10 2 68 3.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 1.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 1.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0403 4da167c3fb40c2aa83fbdaae8641642b 234 Pfam PF07702 UTRA domain 86 224 2.5E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VS_2106 01ccb018ba9adfc9d754c44eb4e619e9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.0E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2106 01ccb018ba9adfc9d754c44eb4e619e9 303 SUPERFAMILY SSF46785 6 83 1.13E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2106 01ccb018ba9adfc9d754c44eb4e619e9 303 Gene3D G3DSA:3.40.190.290 96 294 8.1E-17 T 14-10-2018 VS_2106 01ccb018ba9adfc9d754c44eb4e619e9 303 Gene3D G3DSA:1.10.10.10 5 92 1.6E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2106 01ccb018ba9adfc9d754c44eb4e619e9 303 SUPERFAMILY SSF53850 92 301 1.93E-21 T 14-10-2018 VS_2106 01ccb018ba9adfc9d754c44eb4e619e9 303 Pfam PF03466 LysR substrate binding domain 92 299 2.6E-19 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 Gene3D G3DSA:3.30.950.10 121 241 9.1E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 SUPERFAMILY SSF53790 12 232 7.46E-86 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.628 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 Gene3D G3DSA:3.40.1010.10 2 120 9.8E-48 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 9.3E-30 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 285 4.9E-101 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VS_0440 6242c2cf0c62f28b314ab22a3f62abce 288 PIRSF PIRSF005917 1 287 3.0E-108 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VS_0959 87ae461f94a5a8c5f3379d9d6cdcb427 227 Gene3D G3DSA:3.40.50.720 2 225 5.6E-22 T 14-10-2018 VS_0959 87ae461f94a5a8c5f3379d9d6cdcb427 227 SUPERFAMILY SSF51735 1 197 2.29E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0959 87ae461f94a5a8c5f3379d9d6cdcb427 227 Pfam PF00106 short chain dehydrogenase 7 189 4.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0959 87ae461f94a5a8c5f3379d9d6cdcb427 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0959 87ae461f94a5a8c5f3379d9d6cdcb427 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0959 87ae461f94a5a8c5f3379d9d6cdcb427 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0959 87ae461f94a5a8c5f3379d9d6cdcb427 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 Gene3D G3DSA:3.40.50.300 1 213 9.7E-77 T 14-10-2018 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 SUPERFAMILY SSF52540 1 190 2.45E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 Pfam PF00406 Adenylate kinase 5 185 1.4E-58 T 14-10-2018 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 PRINTS PR00094 Adenylate kinase signature 173 187 4.3E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 PRINTS PR00094 Adenylate kinase signature 4 17 4.3E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 PRINTS PR00094 Adenylate kinase signature 32 46 4.3E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 PRINTS PR00094 Adenylate kinase signature 156 171 4.3E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 PRINTS PR00094 Adenylate kinase signature 81 97 4.3E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.0E-73 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.707 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 5.3E-14 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VS_2268 e8c89b9942b28154b6e3e5cbd323b070 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VS_II0303 84d63f005e18b9ac26211477a25ed708 650 Gene3D G3DSA:3.20.20.450 398 647 4.6E-75 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0303 84d63f005e18b9ac26211477a25ed708 650 Pfam PF00563 EAL domain 401 633 1.7E-60 T 14-10-2018 IPR001633 EAL domain VS_II0303 84d63f005e18b9ac26211477a25ed708 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 362 1.1E-26 T 14-10-2018 IPR000160 GGDEF domain VS_II0303 84d63f005e18b9ac26211477a25ed708 650 SMART SM00052 377 638 4.0E-72 T 14-10-2018 IPR001633 EAL domain VS_II0303 84d63f005e18b9ac26211477a25ed708 650 SMART SM00267 206 370 3.6E-24 T 14-10-2018 IPR000160 GGDEF domain VS_II0303 84d63f005e18b9ac26211477a25ed708 650 SUPERFAMILY SSF141868 401 644 9.02E-73 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0303 84d63f005e18b9ac26211477a25ed708 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 362 6.5E-24 T 14-10-2018 IPR000160 GGDEF domain VS_II0303 84d63f005e18b9ac26211477a25ed708 650 Gene3D G3DSA:3.30.70.270 211 385 7.5E-33 T 14-10-2018 VS_II0303 84d63f005e18b9ac26211477a25ed708 650 SUPERFAMILY SSF55073 222 372 1.18E-28 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0497 a2f1fa39a05b78500445ffef78898c0c 397 Pfam PF07690 Major Facilitator Superfamily 15 263 8.9E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II0497 a2f1fa39a05b78500445ffef78898c0c 397 SUPERFAMILY SSF103473 8 385 7.06E-55 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II0497 a2f1fa39a05b78500445ffef78898c0c 397 Gene3D G3DSA:1.20.1720.10 10 384 3.2E-81 T 14-10-2018 VS_2489 522f1aeee09a9abdf65c02960bafc2d1 276 SUPERFAMILY SSF51717 5 274 3.14E-107 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_2489 522f1aeee09a9abdf65c02960bafc2d1 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.9E-104 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 VS_2489 522f1aeee09a9abdf65c02960bafc2d1 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_2489 522f1aeee09a9abdf65c02960bafc2d1 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_2489 522f1aeee09a9abdf65c02960bafc2d1 276 Gene3D G3DSA:3.20.20.20 1 276 1.2E-112 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_2489 522f1aeee09a9abdf65c02960bafc2d1 276 Pfam PF00809 Pterin binding enzyme 18 257 7.2E-92 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 1.2E-247 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 SUPERFAMILY SSF50615 1 75 1.57E-24 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 6.0E-60 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 Gene3D G3DSA:3.40.50.300 76 351 5.9E-110 T 14-10-2018 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.717 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 SUPERFAMILY SSF47917 352 466 1.6E-50 T 14-10-2018 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 Gene3D G3DSA:1.10.1140.10 352 467 2.1E-53 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 SMART SM00382 142 334 8.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 SUPERFAMILY SSF52540 77 355 1.36E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 3.0E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_3152 cbf2e7d55662d1b729044f8c1b04ceb7 467 Gene3D G3DSA:2.40.10.170 2 75 2.2E-28 T 14-10-2018 VS_1065 2952a5bc6333c35f8ad3ac5800fecdb9 196 Pfam PF07445 Primosomal replication protein priC 19 187 4.0E-41 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC VS_1065 2952a5bc6333c35f8ad3ac5800fecdb9 196 Gene3D G3DSA:1.20.1270.340 13 112 2.8E-14 T 14-10-2018 IPR038338 PriB/PriC superfamily VS_0078 f04e1a227045af6d1c6f0f6745d8fb26 305 SUPERFAMILY SSF110997 55 127 2.22E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_0078 f04e1a227045af6d1c6f0f6745d8fb26 305 Pfam PF05036 Sporulation related domain 57 126 2.4E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VS_0021 344f2eb6e857e8678cb957a4f1affb97 407 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 152 212 9.1E-7 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VS_0021 344f2eb6e857e8678cb957a4f1affb97 407 Gene3D G3DSA:3.40.50.2300 44 143 1.9E-5 T 14-10-2018 VS_0021 344f2eb6e857e8678cb957a4f1affb97 407 SUPERFAMILY SSF52540 151 374 1.64E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0021 344f2eb6e857e8678cb957a4f1affb97 407 Gene3D G3DSA:3.40.50.300 149 388 4.4E-22 T 14-10-2018 VS_2388 66835361a388079c9e749ed869dc219d 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 8.0E-111 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VS_2388 66835361a388079c9e749ed869dc219d 258 PIRSF PIRSF029037 1 258 3.0E-111 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 1.3E-203 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 SUPERFAMILY SSF53720 4 480 6.02E-173 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.547 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 Gene3D G3DSA:3.40.605.10 8 472 1.7E-181 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 Pfam PF00171 Aldehyde dehydrogenase family 15 474 8.5E-176 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_II0057 36900931bbb3f1f7760edb74e58e154c 486 Gene3D G3DSA:3.40.309.10 251 444 1.7E-181 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_II0592 cc3e074ce2d08a650a2e55f0c16f4a4b 410 Gene3D G3DSA:1.10.287.470 104 179 2.6E-43 T 14-10-2018 VS_II0592 cc3e074ce2d08a650a2e55f0c16f4a4b 410 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 372 2.1E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VS_II0592 cc3e074ce2d08a650a2e55f0c16f4a4b 410 Gene3D G3DSA:2.40.420.20 307 372 2.6E-43 T 14-10-2018 VS_II0592 cc3e074ce2d08a650a2e55f0c16f4a4b 410 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 272 3.9E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_II0592 cc3e074ce2d08a650a2e55f0c16f4a4b 410 Gene3D G3DSA:2.40.50.100 67 213 2.6E-43 T 14-10-2018 VS_II0592 cc3e074ce2d08a650a2e55f0c16f4a4b 410 SUPERFAMILY SSF111369 56 300 2.62E-23 T 14-10-2018 VS_II0592 cc3e074ce2d08a650a2e55f0c16f4a4b 410 Gene3D G3DSA:2.40.30.170 56 306 2.6E-43 T 14-10-2018 VS_2349 5c15fb3cfbc0f27c05ee5a0b77b7a6f0 255 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.595 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VS_2349 5c15fb3cfbc0f27c05ee5a0b77b7a6f0 255 SUPERFAMILY SSF64005 14 239 5.89E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VS_2349 5c15fb3cfbc0f27c05ee5a0b77b7a6f0 255 Gene3D G3DSA:3.40.1180.10 3 244 9.9E-95 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VS_2349 5c15fb3cfbc0f27c05ee5a0b77b7a6f0 255 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VS_2349 5c15fb3cfbc0f27c05ee5a0b77b7a6f0 255 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 6.5E-82 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VS_2349 5c15fb3cfbc0f27c05ee5a0b77b7a6f0 255 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 243 1.6E-94 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VS_2879 6344d9b1252887caa74b024435d02df8 297 SUPERFAMILY SSF46785 1 86 3.04E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2879 6344d9b1252887caa74b024435d02df8 297 Gene3D G3DSA:3.40.190.10 164 267 2.4E-65 T 14-10-2018 VS_2879 6344d9b1252887caa74b024435d02df8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2879 6344d9b1252887caa74b024435d02df8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2879 6344d9b1252887caa74b024435d02df8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2879 6344d9b1252887caa74b024435d02df8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2879 6344d9b1252887caa74b024435d02df8 297 Gene3D G3DSA:3.40.190.10 91 281 2.4E-65 T 14-10-2018 VS_2879 6344d9b1252887caa74b024435d02df8 297 Gene3D G3DSA:1.10.10.10 1 84 5.6E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2879 6344d9b1252887caa74b024435d02df8 297 Pfam PF03466 LysR substrate binding domain 90 290 4.4E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2879 6344d9b1252887caa74b024435d02df8 297 SUPERFAMILY SSF53850 89 290 3.88E-37 T 14-10-2018 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 12 287 3.4E-126 T 14-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 Pfam PF13353 4Fe-4S single cluster domain 24 189 3.4E-10 T 14-10-2018 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 PIRSF PIRSF000371 4 294 2.7E-88 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 54 65 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 SUPERFAMILY SSF54862 52 139 1.67E-13 T 14-10-2018 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 Pfam PF04055 Radical SAM superfamily 33 229 1.5E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 SUPERFAMILY SSF102114 94 257 1.26E-7 T 14-10-2018 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 Gene3D G3DSA:3.20.20.70 80 282 6.5E-34 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0455 9e87e921e5b49039dd4648efba5e2309 295 Gene3D G3DSA:3.20.20.70 11 63 1.4E-10 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II1437 b5542f7caf044043d97648a055177849 218 SUPERFAMILY SSF55469 6 216 7.85E-54 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_II1437 b5542f7caf044043d97648a055177849 218 Pfam PF00881 Nitroreductase family 10 193 5.5E-19 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VS_II1437 b5542f7caf044043d97648a055177849 218 Gene3D G3DSA:3.40.109.10 1 218 5.7E-50 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 Gene3D G3DSA:3.40.50.720 18 317 3.2E-111 T 14-10-2018 VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 3.7E-54 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 319 1.1E-21 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 SUPERFAMILY SSF52283 3 139 7.65E-32 T 14-10-2018 VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 Gene3D G3DSA:3.40.50.720 99 288 3.2E-111 T 14-10-2018 VS_0352 c499fb76025303c6a422aaf9f5b8d0a1 320 SUPERFAMILY SSF51735 103 290 8.36E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0142 c954b474a58bbad6d1734c2d35d62672 236 SMART SM01007 13 203 2.0E-64 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VS_II0142 c954b474a58bbad6d1734c2d35d62672 236 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 202 1.9E-42 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VS_II0142 c954b474a58bbad6d1734c2d35d62672 236 Gene3D G3DSA:3.40.225.10 8 235 1.3E-56 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VS_II0142 c954b474a58bbad6d1734c2d35d62672 236 SUPERFAMILY SSF53639 8 226 5.49E-66 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VS_3120 6e06117c0c98a8b45f8986d381d1f968 161 SMART SM01001 1 152 3.0E-101 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VS_3120 6e06117c0c98a8b45f8986d381d1f968 161 SUPERFAMILY SSF52255 2 158 7.72E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VS_3120 6e06117c0c98a8b45f8986d381d1f968 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.183 T 14-10-2018 IPR033747 Class I PurE VS_3120 6e06117c0c98a8b45f8986d381d1f968 161 Gene3D G3DSA:3.40.50.7700 1 161 6.4E-72 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VS_3120 6e06117c0c98a8b45f8986d381d1f968 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 2.1E-66 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VS_3120 6e06117c0c98a8b45f8986d381d1f968 161 PIRSF PIRSF001338 1 160 1.9E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VS_3120 6e06117c0c98a8b45f8986d381d1f968 161 Pfam PF00731 AIR carboxylase 3 150 9.3E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VS_0366 b9db48ec50a37b28bb9e89cfaa50723d 161 Pfam PF12821 Threonine/Serine exporter, ThrE 17 151 3.3E-36 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE VS_II0424 e2d9f0253e4faf067a1f13bfbd2aed8a 418 SUPERFAMILY SSF51261 133 381 1.52E-63 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_II0424 e2d9f0253e4faf067a1f13bfbd2aed8a 418 Gene3D G3DSA:3.10.450.350 56 149 6.8E-27 T 14-10-2018 VS_II0424 e2d9f0253e4faf067a1f13bfbd2aed8a 418 Pfam PF01551 Peptidase family M23 286 379 2.3E-29 T 14-10-2018 IPR016047 Peptidase M23 VS_II0424 e2d9f0253e4faf067a1f13bfbd2aed8a 418 Gene3D G3DSA:3.10.450.350 150 254 1.9E-34 T 14-10-2018 VS_II0424 e2d9f0253e4faf067a1f13bfbd2aed8a 418 Pfam PF04225 Opacity-associated protein A LysM-like domain 63 145 9.0E-5 T 14-10-2018 IPR007340 Opacity-associated protein A VS_II0424 e2d9f0253e4faf067a1f13bfbd2aed8a 418 Gene3D G3DSA:2.70.70.10 255 386 1.6E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_2510 60b9eb4a37c7a03e10c98c735f2a401b 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.4E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_2510 60b9eb4a37c7a03e10c98c735f2a401b 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 4.9E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_2510 60b9eb4a37c7a03e10c98c735f2a401b 331 Gene3D G3DSA:3.40.50.300 8 331 7.8E-80 T 14-10-2018 VS_2510 60b9eb4a37c7a03e10c98c735f2a401b 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2510 60b9eb4a37c7a03e10c98c735f2a401b 331 Pfam PF00005 ABC transporter 35 192 2.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2510 60b9eb4a37c7a03e10c98c735f2a401b 331 SUPERFAMILY SSF52540 10 262 3.68E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2510 60b9eb4a37c7a03e10c98c735f2a401b 331 SMART SM00382 43 241 8.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 Gene3D G3DSA:3.30.360.10 153 312 6.6E-120 T 14-10-2018 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 SUPERFAMILY SSF51735 1 173 2.48E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 1.6E-12 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 146 4.7E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.9E-118 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 Gene3D G3DSA:3.40.50.720 6 327 6.6E-120 T 14-10-2018 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 SUPERFAMILY SSF55347 154 308 1.28E-49 T 14-10-2018 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 SMART SM00859 3 146 7.5E-46 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VS_2888 0eee8a88bce76b89b4a2a35c18d9a07a 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.661 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 1.1E-64 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 Pfam PF08279 HTH domain 8 59 1.5E-11 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 208 1.1E-20 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 Gene3D G3DSA:3.30.930.10 65 271 1.7E-65 T 14-10-2018 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 Gene3D G3DSA:1.10.10.10 1 63 3.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2979 a75072f3629ecbed71b9be234ac2806c 321 SUPERFAMILY SSF46785 3 60 2.04E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2979 a75072f3629ecbed71b9be234ac2806c 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 2.6E-12 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 Gene3D G3DSA:2.30.30.100 272 314 2.3E-18 T 14-10-2018 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 318 33.078 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 SUPERFAMILY SSF55681 80 269 1.62E-59 T 14-10-2018 VS_2979 a75072f3629ecbed71b9be234ac2806c 321 SUPERFAMILY SSF50037 272 318 5.04E-11 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Pfam PF03476 MOSC N-terminal beta barrel domain 17 129 2.0E-29 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Pfam PF00175 Oxidoreductase NAD-binding domain 402 505 3.2E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Pfam PF00970 Oxidoreductase FAD-binding domain 294 391 2.6E-15 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00410 Phenol hydroxylase reductase family signature 322 334 1.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00410 Phenol hydroxylase reductase family signature 385 394 1.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00410 Phenol hydroxylase reductase family signature 491 499 1.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00410 Phenol hydroxylase reductase family signature 401 420 1.0E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Gene3D G3DSA:3.10.20.30 521 618 1.8E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Gene3D G3DSA:3.40.50.80 394 520 4.2E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 322 332 9.7E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 420 9.7E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 438 449 9.7E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 341 348 9.7E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 491 499 9.7E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 SUPERFAMILY SSF54292 515 617 9.96E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Gene3D G3DSA:2.40.30.10 287 391 7.3E-25 T 14-10-2018 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 547 610 2.1E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 Pfam PF03473 MOSC domain 149 273 8.9E-30 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 SUPERFAMILY SSF50800 14 275 5.75E-15 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 SUPERFAMILY SSF52343 395 525 1.44E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 SUPERFAMILY SSF141673 17 144 6.15E-30 T 14-10-2018 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 568 576 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VS_II0274 7681951d5cf65c1b1303b54f00096bb1 618 SUPERFAMILY SSF63380 285 393 1.7E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_2136 040765faadb1ffc39c6de9416c30e0de 270 SUPERFAMILY SSF52096 3 245 1.53E-44 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_2136 040765faadb1ffc39c6de9416c30e0de 270 Gene3D G3DSA:3.90.226.10 1 270 2.2E-53 T 14-10-2018 VS_2136 040765faadb1ffc39c6de9416c30e0de 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 234 5.7E-33 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VS_2136 040765faadb1ffc39c6de9416c30e0de 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 Gene3D G3DSA:3.40.190.10 93 290 2.8E-69 T 14-10-2018 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 SUPERFAMILY SSF46785 1 112 5.62E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 Gene3D G3DSA:3.40.190.10 163 267 2.8E-69 T 14-10-2018 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.5E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 Pfam PF03466 LysR substrate binding domain 89 292 4.7E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 SUPERFAMILY SSF53850 89 296 1.99E-36 T 14-10-2018 VS_1144 2807f45c0c01a1e17d61891e980bcba6 303 Gene3D G3DSA:1.10.10.10 1 92 3.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0199 a1d16df06cc49005036999e6858b2bd8 110 PIRSF PIRSF002855 23 110 5.0E-24 T 14-10-2018 IPR016367 Murein-lipoprotein VS_II0199 a1d16df06cc49005036999e6858b2bd8 110 Gene3D G3DSA:1.20.5.190 48 109 3.0E-8 T 14-10-2018 VS_II0199 a1d16df06cc49005036999e6858b2bd8 110 Pfam PF04728 Lipoprotein leucine-zipper 51 110 8.8E-19 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 VS_II0199 a1d16df06cc49005036999e6858b2bd8 110 SUPERFAMILY SSF58042 40 109 5.36E-13 T 14-10-2018 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1077 1118 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 Gene3D G3DSA:2.130.10.10 93 327 3.9E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 SUPERFAMILY SSF63829 253 480 9.15E-9 T 14-10-2018 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 Pfam PF12833 Helix-turn-helix domain 1047 1123 1.2E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 Gene3D G3DSA:2.130.10.10 329 585 1.1E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 Pfam PF07494 Two component regulator propeller 284 307 0.006 T 14-10-2018 IPR011110 Two component regulator propeller VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 SUPERFAMILY SSF63829 96 322 3.79E-6 T 14-10-2018 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 Gene3D G3DSA:1.10.10.60 1019 1128 1.4E-27 T 14-10-2018 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 SUPERFAMILY SSF46689 1076 1124 7.17E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 SMART SM00342 1040 1122 3.3E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1106 1122 7.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_2236 c17012997d16c4f4e655bb9acb69deb8 1128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1091 1106 7.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1450 c612510204932a085c5827102a66ecd9 315 Pfam PF04463 Protein of unknown function (DUF523) 7 147 3.4E-32 T 14-10-2018 IPR007553 Domain of unknown function DUF523 VS_II1450 c612510204932a085c5827102a66ecd9 315 Pfam PF08349 Protein of unknown function (DUF1722) 191 306 4.7E-41 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 VS_II1450 c612510204932a085c5827102a66ecd9 315 PIRSF PIRSF037004 1 315 5.3E-120 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VS_1259 44fa84914aa04a8a8056c966355b80e2 227 Gene3D G3DSA:3.30.1060.10 49 223 5.6E-36 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_1259 44fa84914aa04a8a8056c966355b80e2 227 Pfam PF01625 Peptide methionine sulfoxide reductase 56 211 3.1E-40 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_1259 44fa84914aa04a8a8056c966355b80e2 227 SUPERFAMILY SSF55068 18 217 2.62E-43 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_1259 44fa84914aa04a8a8056c966355b80e2 227 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 54 219 23.673 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_II1275 c78b75f32aee8480823ae8c4865dfa0f 112 SUPERFAMILY SSF46785 16 105 1.36E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1275 c78b75f32aee8480823ae8c4865dfa0f 112 Pfam PF01638 HxlR-like helix-turn-helix 26 108 1.3E-14 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type VS_II1275 c78b75f32aee8480823ae8c4865dfa0f 112 Gene3D G3DSA:1.10.10.10 7 108 8.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2166 d4b7fa09af09ed2da38cbd6b6dab0ca6 286 SUPERFAMILY SSF54637 116 283 2.36E-59 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2166 d4b7fa09af09ed2da38cbd6b6dab0ca6 286 SUPERFAMILY SSF54637 5 114 3.13E-39 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2166 d4b7fa09af09ed2da38cbd6b6dab0ca6 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.5E-95 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 VS_2166 d4b7fa09af09ed2da38cbd6b6dab0ca6 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.6E-61 T 14-10-2018 VS_2166 d4b7fa09af09ed2da38cbd6b6dab0ca6 286 Gene3D G3DSA:3.10.129.90 1 286 3.6E-107 T 14-10-2018 VS_II1304 118dc8e5d91fba105a767cb2284ba9cc 141 Pfam PF11215 Protein of unknown function (DUF3010) 1 136 9.0E-62 T 14-10-2018 IPR021378 Protein of unknown function DUF3010 VS_2332 abd61300859508e3c2bd69a051c3c61c 341 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 127 331 2.2E-6 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VS_2332 abd61300859508e3c2bd69a051c3c61c 341 Gene3D G3DSA:3.60.10.10 122 341 1.6E-20 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_2332 abd61300859508e3c2bd69a051c3c61c 341 SUPERFAMILY SSF56219 121 335 1.22E-22 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 Gene3D G3DSA:3.30.565.10 298 427 3.0E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 286 2.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 Gene3D G3DSA:1.10.287.130 172 289 2.6E-16 T 14-10-2018 VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 SMART SM00387 332 422 8.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 SUPERFAMILY SSF55874 279 418 2.41E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 SUPERFAMILY SSF47384 206 288 7.46E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 419 1.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1136 4087f54d9c6d24a96d719a162dd708d0 432 SMART SM00388 223 288 4.7E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_2738 891e6cc5b14487db9700936e66c319d4 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 3.2E-170 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 7.0E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 7.0E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 7.0E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 7.0E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 7.0E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 7.0E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 Pfam PF02274 Amidinotransferase 18 403 6.4E-108 T 14-10-2018 VS_2738 891e6cc5b14487db9700936e66c319d4 406 PIRSF PIRSF006356 1 406 1.9E-154 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 SUPERFAMILY SSF55909 3 406 6.28E-127 T 14-10-2018 VS_2738 891e6cc5b14487db9700936e66c319d4 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.736 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VS_2738 891e6cc5b14487db9700936e66c319d4 406 Gene3D G3DSA:1.10.3930.10 68 148 3.3E-146 T 14-10-2018 VS_2738 891e6cc5b14487db9700936e66c319d4 406 Gene3D G3DSA:3.75.10.10 6 403 3.3E-146 T 14-10-2018 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 PRINTS PR00773 GrpE protein signature 145 160 8.2E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 PRINTS PR00773 GrpE protein signature 172 191 8.2E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 PRINTS PR00773 GrpE protein signature 62 78 8.2E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 PRINTS PR00773 GrpE protein signature 90 105 8.2E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 SUPERFAMILY SSF51064 138 193 8.76E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 Gene3D G3DSA:2.30.22.10 137 193 1.7E-25 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 ProSitePatterns PS01071 grpE protein signature. 148 191 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 SUPERFAMILY SSF58014 39 137 3.66E-29 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 Gene3D G3DSA:3.90.20.20 30 136 3.5E-32 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 Hamap MF_01151 Protein GrpE [grpE]. 2 193 22.186 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VS_0649 488fbcc6ac42d5577c98e25aef62f910 193 Pfam PF01025 GrpE 29 193 2.9E-53 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 35 49 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 Pfam PF00209 Sodium:neurotransmitter symporter family 151 448 1.3E-32 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 Pfam PF00209 Sodium:neurotransmitter symporter family 11 119 4.9E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 92 118 2.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 316 336 2.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 19 40 2.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 48 67 2.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1980 e6efc105708eacdeeaa7d3fe0afce09a 477 SUPERFAMILY SSF161070 11 452 1.02E-129 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VS_0067 9d4f109fa11ee05897f2779465caa2fd 166 SUPERFAMILY SSF46626 89 162 5.2E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_0067 9d4f109fa11ee05897f2779465caa2fd 166 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 88 162 2.1E-15 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_0067 9d4f109fa11ee05897f2779465caa2fd 166 PRINTS PR00607 Class IE cytochrome C signature 152 163 3.6E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VS_0067 9d4f109fa11ee05897f2779465caa2fd 166 PRINTS PR00607 Class IE cytochrome C signature 137 149 3.6E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VS_0067 9d4f109fa11ee05897f2779465caa2fd 166 PRINTS PR00607 Class IE cytochrome C signature 98 109 3.6E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VS_0067 9d4f109fa11ee05897f2779465caa2fd 166 PRINTS PR00607 Class IE cytochrome C signature 109 119 3.6E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VS_0067 9d4f109fa11ee05897f2779465caa2fd 166 Gene3D G3DSA:1.10.760.10 88 165 3.2E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 6.7E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 SUPERFAMILY SSF55681 3 204 3.89E-70 T 14-10-2018 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 PIRSF PIRSF016262 1 217 2.1E-63 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.3 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 1.0E-22 T 14-10-2018 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 Gene3D G3DSA:3.30.930.10 1 203 6.9E-65 T 14-10-2018 VS_0708 e5fbf05b8dc9230947073540a6dcea41 219 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 203 2.2E-71 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VS_2059 279a7a294fca2a1bb917c7a9a67444ee 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.1E-112 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VS_2059 279a7a294fca2a1bb917c7a9a67444ee 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.071 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VS_2059 279a7a294fca2a1bb917c7a9a67444ee 248 Pfam PF02348 Cytidylyltransferase 5 221 5.4E-64 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VS_2059 279a7a294fca2a1bb917c7a9a67444ee 248 Gene3D G3DSA:3.90.550.10 1 248 1.1E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2059 279a7a294fca2a1bb917c7a9a67444ee 248 SUPERFAMILY SSF53448 3 246 4.96E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0431 d9d69988aa524ed61b999686088dcf30 196 Gene3D G3DSA:1.20.5.510 1 40 1.4E-5 T 14-10-2018 VS_0431 d9d69988aa524ed61b999686088dcf30 196 Pfam PF00355 Rieske [2Fe-2S] domain 53 174 6.5E-12 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VS_0431 d9d69988aa524ed61b999686088dcf30 196 Gene3D G3DSA:2.102.10.10 43 190 1.6E-46 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_0431 d9d69988aa524ed61b999686088dcf30 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VS_0431 d9d69988aa524ed61b999686088dcf30 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VS_0431 d9d69988aa524ed61b999686088dcf30 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VS_0431 d9d69988aa524ed61b999686088dcf30 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VS_0431 d9d69988aa524ed61b999686088dcf30 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 1.1E-73 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VS_0431 d9d69988aa524ed61b999686088dcf30 196 SUPERFAMILY SSF50022 30 191 4.0E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_2197 7f7d99cd3e5bb1cbd64a46349ac52971 199 SMART SM01144 1 189 5.1E-71 T 14-10-2018 IPR005636 DTW VS_2197 7f7d99cd3e5bb1cbd64a46349ac52971 199 Pfam PF03942 DTW domain 3 184 7.7E-51 T 14-10-2018 IPR005636 DTW VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 Gene3D G3DSA:3.30.1360.70 1 106 4.3E-32 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 SUPERFAMILY SSF47323 455 577 5.1E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 3.0E-198 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 SUPERFAMILY SSF52374 111 454 6.29E-92 T 14-10-2018 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 Pfam PF05746 DALR anticodon binding domain 461 577 2.7E-37 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 Gene3D G3DSA:3.40.50.620 107 454 7.1E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 4.0E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 SMART SM00836 461 577 1.7E-41 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.051 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 SUPERFAMILY SSF55190 2 96 6.15E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 SMART SM01016 5 87 2.6E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 8.9E-160 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VS_2230 da7679f89ad0c888e48da0a5c6e3c19c 577 Gene3D G3DSA:1.10.730.10 455 577 3.2E-36 T 14-10-2018 VS_1618 183e3babb98de387911e37b70b0e37d0 140 SUPERFAMILY SSF52402 3 139 3.1E-22 T 14-10-2018 VS_1618 183e3babb98de387911e37b70b0e37d0 140 Pfam PF00582 Universal stress protein family 3 138 2.1E-11 T 14-10-2018 IPR006016 UspA VS_1618 183e3babb98de387911e37b70b0e37d0 140 PIRSF PIRSF006276 1 140 1.1E-38 T 14-10-2018 IPR006015 Universal stress protein A VS_1618 183e3babb98de387911e37b70b0e37d0 140 Gene3D G3DSA:3.40.50.620 3 140 7.8E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 SUPERFAMILY SSF88946 3 89 4.71E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 7 177 6.2E-57 T 14-10-2018 IPR014304 RNA polymerase sigma-Z type VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 Pfam PF08281 Sigma-70, region 4 105 152 1.7E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 Pfam PF04542 Sigma-70 region 2 8 73 5.2E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 Gene3D G3DSA:1.10.10.10 98 162 1.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 156 1.9E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 SUPERFAMILY SSF88659 100 160 1.55E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_II1255 16d5cb8a745a63b5526f67ab3ca4989d 186 Gene3D G3DSA:1.10.1740.10 2 97 1.9E-16 T 14-10-2018 VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 SMART SM00671 62 97 130.0 T 14-10-2018 IPR006597 Sel1-like repeat VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 SMART SM00671 135 170 1.8 T 14-10-2018 IPR006597 Sel1-like repeat VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 SMART SM00671 207 242 6.1E-4 T 14-10-2018 IPR006597 Sel1-like repeat VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 SMART SM00671 171 206 6.6 T 14-10-2018 IPR006597 Sel1-like repeat VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 Gene3D G3DSA:1.25.40.10 21 288 1.4E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 Pfam PF08238 Sel1 repeat 172 205 0.0032 T 14-10-2018 IPR006597 Sel1-like repeat VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 Pfam PF08238 Sel1 repeat 81 97 0.3 T 14-10-2018 IPR006597 Sel1-like repeat VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 Pfam PF08238 Sel1 repeat 212 241 2.7E-6 T 14-10-2018 IPR006597 Sel1-like repeat VS_II0174 9326b4d7e1b5b7670d87464bdb2645bb 414 SUPERFAMILY SSF81901 66 283 6.8E-28 T 14-10-2018 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 SUPERFAMILY SSF51905 5 385 7.63E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 Gene3D G3DSA:3.50.50.60 6 339 6.9E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 Gene3D G3DSA:3.30.9.50 80 270 6.9E-121 T 14-10-2018 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.2E-20 T 14-10-2018 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 4.2E-20 T 14-10-2018 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 4.2E-20 T 14-10-2018 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 4.2E-20 T 14-10-2018 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 1.8E-136 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VS_2633 0aaabcf3bf24eec879fddd56e3cfe67f 407 Pfam PF01494 FAD binding domain 5 347 2.7E-30 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VS_1401 8a89d2de2cd1a1dcdf50f2bc53c8ac08 365 Gene3D G3DSA:1.10.3720.10 146 364 9.2E-49 T 14-10-2018 IPR035906 MetI-like superfamily VS_1401 8a89d2de2cd1a1dcdf50f2bc53c8ac08 365 SUPERFAMILY SSF161098 154 348 6.8E-41 T 14-10-2018 IPR035906 MetI-like superfamily VS_1401 8a89d2de2cd1a1dcdf50f2bc53c8ac08 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 359 9.3E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1401 8a89d2de2cd1a1dcdf50f2bc53c8ac08 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 1.6E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_0642 865c7db891d115db02bc2c7b967d3449 184 ProSitePatterns PS01317 SsrA-binding protein. 56 68 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site VS_0642 865c7db891d115db02bc2c7b967d3449 184 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 38 162 4.0E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VS_0642 865c7db891d115db02bc2c7b967d3449 184 Gene3D G3DSA:2.40.280.10 30 159 4.8E-44 T 14-10-2018 IPR023620 Small protein B VS_0642 865c7db891d115db02bc2c7b967d3449 184 TIGRFAM TIGR00086 smpB: SsrA-binding protein 38 180 1.1E-51 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VS_0642 865c7db891d115db02bc2c7b967d3449 184 Pfam PF01668 SmpB protein 38 180 3.2E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VS_0642 865c7db891d115db02bc2c7b967d3449 184 Hamap MF_00023 SsrA-binding protein [smpB]. 28 184 62.507 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VS_0642 865c7db891d115db02bc2c7b967d3449 184 SUPERFAMILY SSF74982 31 162 1.23E-47 T 14-10-2018 IPR023620 Small protein B VS_1402 3d264df0b975a64e7da63c99d26b36a8 401 SUPERFAMILY SSF161098 194 382 7.46E-24 T 14-10-2018 IPR035906 MetI-like superfamily VS_1402 3d264df0b975a64e7da63c99d26b36a8 401 SUPERFAMILY SSF161098 91 161 3.05E-11 T 14-10-2018 IPR035906 MetI-like superfamily VS_1402 3d264df0b975a64e7da63c99d26b36a8 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 1.3E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_1402 3d264df0b975a64e7da63c99d26b36a8 401 Gene3D G3DSA:1.10.3720.10 190 397 9.3E-32 T 14-10-2018 IPR035906 MetI-like superfamily VS_1402 3d264df0b975a64e7da63c99d26b36a8 401 Gene3D G3DSA:1.10.3720.10 79 186 8.1E-14 T 14-10-2018 IPR035906 MetI-like superfamily VS_1402 3d264df0b975a64e7da63c99d26b36a8 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 2.5E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1608 1905b9827a9c99521af37cbadd953c23 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 161 7.4E-16 T 14-10-2018 VS_1608 1905b9827a9c99521af37cbadd953c23 166 Gene3D G3DSA:3.40.630.30 2 166 1.4E-31 T 14-10-2018 VS_1608 1905b9827a9c99521af37cbadd953c23 166 SUPERFAMILY SSF55729 1 164 2.09E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2624 9db2519b17fbf785965e55079d97d3be 211 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 103 1.3E-34 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VS_2624 9db2519b17fbf785965e55079d97d3be 211 SUPERFAMILY SSF89069 8 71 4.05E-20 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VS_2624 9db2519b17fbf785965e55079d97d3be 211 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 142 194 8.9E-19 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VS_2624 9db2519b17fbf785965e55079d97d3be 211 PIRSF PIRSF016938 3 199 9.0E-33 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VS_2624 9db2519b17fbf785965e55079d97d3be 211 Gene3D G3DSA:1.10.10.880 6 71 1.9E-23 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VS_2279 87fd0853996d3aae4428c559ce665a45 275 Gene3D G3DSA:3.40.50.720 2 262 1.2E-59 T 14-10-2018 VS_2279 87fd0853996d3aae4428c559ce665a45 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_2279 87fd0853996d3aae4428c559ce665a45 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_2279 87fd0853996d3aae4428c559ce665a45 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_2279 87fd0853996d3aae4428c559ce665a45 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_2279 87fd0853996d3aae4428c559ce665a45 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_2279 87fd0853996d3aae4428c559ce665a45 275 SUPERFAMILY SSF51735 2 265 8.01E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2279 87fd0853996d3aae4428c559ce665a45 275 Pfam PF00106 short chain dehydrogenase 3 187 2.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_3029 986dc7cc8ee9438608ddfd0994f10ce3 109 Gene3D G3DSA:2.40.50.660 32 108 2.6E-7 T 14-10-2018 VS_3029 986dc7cc8ee9438608ddfd0994f10ce3 109 Pfam PF10694 Protein of unknown function (DUF2500) 6 105 4.6E-25 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 160 210 6.3E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 Gene3D G3DSA:1.10.150.240 38 108 4.2E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 SUPERFAMILY SSF56784 21 241 2.48E-44 T 14-10-2018 IPR036412 HAD-like superfamily VS_0170 34d977aba24056cba17ad88b7e429eaf 247 Pfam PF13419 Haloacid dehalogenase-like hydrolase 28 210 9.2E-33 T 14-10-2018 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 121 134 2.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 2.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 25 36 2.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 199 212 2.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_0170 34d977aba24056cba17ad88b7e429eaf 247 Gene3D G3DSA:3.40.50.1000 26 229 4.2E-47 T 14-10-2018 IPR023214 HAD superfamily VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 SUPERFAMILY SSF52440 4 115 1.82E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 32.466 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 Pfam PF01820 D-ala D-ala ligase N-terminus 5 106 5.7E-21 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 PIRSF PIRSF039102 1 331 2.3E-77 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 Gene3D G3DSA:3.30.1490.20 132 199 2.4E-83 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 Pfam PF07478 D-ala D-ala ligase C-terminus 126 325 1.9E-54 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 328 1.2E-97 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 Gene3D G3DSA:3.40.50.20 19 326 2.4E-83 T 14-10-2018 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 Gene3D G3DSA:3.30.470.20 105 320 2.4E-83 T 14-10-2018 VS_II0746 f029e7dfb2e6da441fdd479ec6d0b326 331 SUPERFAMILY SSF56059 116 326 2.36E-44 T 14-10-2018 VS_3020 dda747e411bee1163ce6ab764309cecf 225 Gene3D G3DSA:3.40.50.300 1 224 1.1E-60 T 14-10-2018 VS_3020 dda747e411bee1163ce6ab764309cecf 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_3020 dda747e411bee1163ce6ab764309cecf 225 SMART SM00382 27 215 3.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_3020 dda747e411bee1163ce6ab764309cecf 225 Pfam PF00005 ABC transporter 18 165 1.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_3020 dda747e411bee1163ce6ab764309cecf 225 SUPERFAMILY SSF52540 1 220 1.21E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3020 dda747e411bee1163ce6ab764309cecf 225 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 4.3E-89 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VS_II0841 03d9fbc548bf6cd79d8d588802b3665c 459 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 416 5.8E-60 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_II0841 03d9fbc548bf6cd79d8d588802b3665c 459 Gene3D G3DSA:3.40.50.1100 40 454 7.0E-193 T 14-10-2018 VS_II0841 03d9fbc548bf6cd79d8d588802b3665c 459 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 28 454 1.2E-217 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VS_II0841 03d9fbc548bf6cd79d8d588802b3665c 459 Gene3D G3DSA:3.40.50.1100 132 254 7.0E-193 T 14-10-2018 VS_II0841 03d9fbc548bf6cd79d8d588802b3665c 459 SUPERFAMILY SSF53686 87 453 1.11E-50 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_II0841 03d9fbc548bf6cd79d8d588802b3665c 459 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 124 138 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VS_II0841 03d9fbc548bf6cd79d8d588802b3665c 459 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 459 276.906 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VS_2170 292f45522fb48db342f0cdd9b45a7e41 106 Gene3D G3DSA:1.10.3340.10 5 106 1.3E-46 T 14-10-2018 IPR036810 SMc04008-like superfamily VS_2170 292f45522fb48db342f0cdd9b45a7e41 106 SUPERFAMILY SSF158757 8 85 8.11E-37 T 14-10-2018 IPR036810 SMc04008-like superfamily VS_2170 292f45522fb48db342f0cdd9b45a7e41 106 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 2.0E-36 T 14-10-2018 IPR023163 SMc04008-like domain VS_0692 bd57edb56c4412b5cecf537d66f129de 102 PIRSF PIRSF003113 1 99 1.8E-38 T 14-10-2018 IPR002634 BolA protein VS_0692 bd57edb56c4412b5cecf537d66f129de 102 Gene3D G3DSA:3.30.300.90 1 89 3.7E-36 T 14-10-2018 VS_0692 bd57edb56c4412b5cecf537d66f129de 102 SUPERFAMILY SSF82657 1 87 7.98E-32 T 14-10-2018 IPR036065 BolA-like superfamily VS_0692 bd57edb56c4412b5cecf537d66f129de 102 Pfam PF01722 BolA-like protein 10 83 1.3E-31 T 14-10-2018 IPR002634 BolA protein VS_2871 1efcd5ea9358a2241d6e4163575cd1f0 362 Gene3D G3DSA:1.20.1090.10 173 362 1.7E-71 T 14-10-2018 VS_2871 1efcd5ea9358a2241d6e4163575cd1f0 362 PIRSF PIRSF001455 16 360 1.9E-108 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VS_2871 1efcd5ea9358a2241d6e4163575cd1f0 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 1.9E-121 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VS_2871 1efcd5ea9358a2241d6e4163575cd1f0 362 SUPERFAMILY SSF56796 4 356 2.49E-117 T 14-10-2018 VS_2871 1efcd5ea9358a2241d6e4163575cd1f0 362 Gene3D G3DSA:3.40.50.1970 1 172 5.6E-65 T 14-10-2018 VS_2871 1efcd5ea9358a2241d6e4163575cd1f0 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 356 73.546 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VS_2871 1efcd5ea9358a2241d6e4163575cd1f0 362 Pfam PF01761 3-dehydroquinate synthase 68 325 7.0E-112 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VS_II0289 6b537279190b98bb18f390a944543e5f 255 Gene3D G3DSA:3.30.1150.10 148 255 4.1E-22 T 14-10-2018 VS_II0289 6b537279190b98bb18f390a944543e5f 255 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 178 254 8.0E-24 T 14-10-2018 IPR006260 TonB/TolA, C-terminal VS_II0289 6b537279190b98bb18f390a944543e5f 255 SUPERFAMILY SSF74653 176 252 5.76E-22 T 14-10-2018 VS_II0289 6b537279190b98bb18f390a944543e5f 255 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 177 254 8.5E-23 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VS_II0570 25f8b5dc7ef58b47891379faec9935b8 675 SUPERFAMILY SSF101898 408 632 7.85E-8 T 14-10-2018 VS_II0570 25f8b5dc7ef58b47891379faec9935b8 675 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 639 3.5E-156 T 14-10-2018 IPR008557 Protein of unknown function DUF839 VS_1076 ac907d982880712ef102d984f9ec6601 239 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 13 238 34.414 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VS_1076 ac907d982880712ef102d984f9ec6601 239 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 23 93 1.4E-17 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VS_1076 ac907d982880712ef102d984f9ec6601 239 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 114 232 1.3E-31 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VS_1076 ac907d982880712ef102d984f9ec6601 239 SUPERFAMILY SSF55729 86 238 4.42E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1076 ac907d982880712ef102d984f9ec6601 239 PIRSF PIRSF037208 7 239 5.2E-80 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VS_0265 ca90e5fe8043ad1b10127b17fded7c79 416 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 27 335 49.764 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VS_0265 ca90e5fe8043ad1b10127b17fded7c79 416 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 213 224 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_0265 ca90e5fe8043ad1b10127b17fded7c79 416 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 34 368 7.8E-147 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VS_0265 ca90e5fe8043ad1b10127b17fded7c79 416 Pfam PF13484 4Fe-4S double cluster binding domain 213 276 1.7E-19 T 14-10-2018 VS_0265 ca90e5fe8043ad1b10127b17fded7c79 416 SUPERFAMILY SSF54862 189 343 7.53E-20 T 14-10-2018 VS_0265 ca90e5fe8043ad1b10127b17fded7c79 416 Pfam PF08331 Domain of unknown function (DUF1730) 82 160 2.6E-22 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 SUPERFAMILY SSF56176 25 277 7.27E-50 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 8.7E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 Pfam PF01565 FAD binding domain 52 191 1.2E-34 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 9.8E-64 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 SUPERFAMILY SSF55103 252 537 1.64E-53 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 SUPERFAMILY SSF46548 571 685 1.96E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 Gene3D G3DSA:3.30.465.40 16 207 2.3E-44 T 14-10-2018 VS_1212 20cd064c07fdf8d0a11f458c9de8a653 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_2569 d585b05c17b225836743aa1ed77f631e 596 Pfam PF00682 HMGL-like 8 272 1.9E-57 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VS_2569 d585b05c17b225836743aa1ed77f631e 596 Pfam PF00364 Biotin-requiring enzyme 530 594 7.0E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VS_2569 d585b05c17b225836743aa1ed77f631e 596 Gene3D G3DSA:3.20.20.70 1 466 6.7E-175 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2569 d585b05c17b225836743aa1ed77f631e 596 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 590 2.3E-267 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VS_2569 d585b05c17b225836743aa1ed77f631e 596 SUPERFAMILY SSF51230 521 595 1.7E-20 T 14-10-2018 IPR011053 Single hybrid motif VS_2569 d585b05c17b225836743aa1ed77f631e 596 SUPERFAMILY SSF51569 1 302 1.36E-88 T 14-10-2018 VS_2569 d585b05c17b225836743aa1ed77f631e 596 Pfam PF02436 Conserved carboxylase domain 294 495 3.6E-60 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VS_2569 d585b05c17b225836743aa1ed77f631e 596 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 552 569 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VS_2569 d585b05c17b225836743aa1ed77f631e 596 SUPERFAMILY SSF89000 299 464 3.61E-53 T 14-10-2018 VS_2569 d585b05c17b225836743aa1ed77f631e 596 Gene3D G3DSA:2.40.50.100 521 596 2.0E-22 T 14-10-2018 VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 Gene3D G3DSA:1.10.3210.10 201 382 1.5E-22 T 14-10-2018 VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 Gene3D G3DSA:3.20.20.450 51 200 8.7E-17 T 14-10-2018 IPR035919 EAL domain superfamily VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 SUPERFAMILY SSF141868 5 195 3.66E-28 T 14-10-2018 IPR035919 EAL domain superfamily VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 Pfam PF00563 EAL domain 77 192 2.1E-11 T 14-10-2018 IPR001633 EAL domain VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 PIRSF PIRSF003180 1 405 9.9E-169 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 SMART SM00052 2 197 0.0049 T 14-10-2018 IPR001633 EAL domain VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 SUPERFAMILY SSF109604 183 401 9.1E-41 T 14-10-2018 VS_3035 824b3a65315b292aa7ef4ba42bbd5ff1 406 Pfam PF08668 HDOD domain 206 322 9.8E-13 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VS_II0698 500a90fce2c0fec42ab086749545b171 297 SUPERFAMILY SSF46689 243 294 5.38E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0698 500a90fce2c0fec42ab086749545b171 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0698 500a90fce2c0fec42ab086749545b171 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0698 500a90fce2c0fec42ab086749545b171 297 Pfam PF12833 Helix-turn-helix domain 213 291 2.9E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0698 500a90fce2c0fec42ab086749545b171 297 SMART SM00342 207 290 1.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0698 500a90fce2c0fec42ab086749545b171 297 Gene3D G3DSA:2.60.120.280 51 149 3.2E-7 T 14-10-2018 VS_II0698 500a90fce2c0fec42ab086749545b171 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II0698 500a90fce2c0fec42ab086749545b171 297 SUPERFAMILY SSF51215 35 144 7.06E-8 T 14-10-2018 IPR037923 Transcription regulator HTH-like VS_II0698 500a90fce2c0fec42ab086749545b171 297 Gene3D G3DSA:1.10.10.60 176 295 1.2E-26 T 14-10-2018 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 178 1.5E-39 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 SUPERFAMILY SSF53738 204 313 5.1E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Gene3D G3DSA:3.40.120.10 331 451 4.2E-31 T 14-10-2018 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 SUPERFAMILY SSF53738 32 231 2.24E-42 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Gene3D G3DSA:3.40.120.10 206 330 7.3E-22 T 14-10-2018 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Gene3D G3DSA:3.30.310.50 467 561 9.1E-8 T 14-10-2018 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 SUPERFAMILY SSF53738 303 451 1.44E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 329 445 8.3E-19 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 311 6.1E-25 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 510 547 3.4E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 SUPERFAMILY SSF55957 504 557 1.28E-12 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 3.6E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 228 247 3.6E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 295 310 3.6E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0364 ba0112dd270af2a8faf204d26e0a1748 576 Gene3D G3DSA:3.40.120.10 34 184 1.6E-45 T 14-10-2018 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 Gene3D G3DSA:3.40.50.720 266 562 1.1E-109 T 14-10-2018 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PIRSF PIRSF000106 2 560 3.3E-224 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 SMART SM00919 268 528 8.6E-133 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 SUPERFAMILY SSF53223 4 267 5.61E-109 T 14-10-2018 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 SMART SM01274 78 258 2.9E-106 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PRINTS PR00072 Malic enzyme signature 144 173 7.3E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PRINTS PR00072 Malic enzyme signature 405 421 7.3E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PRINTS PR00072 Malic enzyme signature 264 280 7.3E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PRINTS PR00072 Malic enzyme signature 84 108 7.3E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PRINTS PR00072 Malic enzyme signature 295 311 7.3E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PRINTS PR00072 Malic enzyme signature 180 202 7.3E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 PRINTS PR00072 Malic enzyme signature 239 257 7.3E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.317 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 SUPERFAMILY SSF51735 268 559 8.24E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1202 89a1194e61f7cee882766c0dba6d065c 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 Gene3D G3DSA:3.40.50.10380 13 265 1.7E-113 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 8.1E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VS_1202 89a1194e61f7cee882766c0dba6d065c 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 7.5E-104 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VS_II0647 18aad96c50c72ce7b2c80b440610fbac 262 SUPERFAMILY SSF53474 10 228 4.59E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0647 18aad96c50c72ce7b2c80b440610fbac 262 Gene3D G3DSA:3.40.50.1820 5 236 9.8E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0647 18aad96c50c72ce7b2c80b440610fbac 262 Pfam PF01764 Lipase (class 3) 60 204 1.6E-26 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 SUPERFAMILY SSF51735 28 209 1.66E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.715 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 SUPERFAMILY SSF48179 348 487 7.65E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 8.8E-25 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 8.4E-17 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 Gene3D G3DSA:3.40.50.720 1 208 1.0E-85 T 14-10-2018 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 Gene3D G3DSA:1.10.1040.10 209 494 5.2E-119 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.0E-122 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 3.2E-58 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VS_0061 3d6f8d3079940af797b8c1f86fb75a58 494 SUPERFAMILY SSF48179 210 341 7.99E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_II1397 bc5fa6fba43108291fcf55d81adca57d 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 555 7.4E-104 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VS_II1397 bc5fa6fba43108291fcf55d81adca57d 564 Pfam PF02652 L-lactate permease 7 550 3.4E-107 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 Pfam PF00203 Ribosomal protein S19 3 83 7.0E-37 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.888 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 Gene3D G3DSA:3.30.860.10 1 92 3.6E-44 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 SUPERFAMILY SSF54570 3 84 8.11E-36 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 PIRSF PIRSF002144 1 92 5.9E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2828 4de4173d5d5fa5087da026dded92a1ac 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 7.5E-47 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VS_II0675 721352b631b6861e41a11996f613d876 461 SMART SM00387 346 461 7.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0675 721352b631b6861e41a11996f613d876 461 Pfam PF16750 Sensor domain of 2-component histidine kinase 52 152 4.9E-29 T 14-10-2018 IPR031930 2-component histidine kinase, sensor domain VS_II0675 721352b631b6861e41a11996f613d876 461 SUPERFAMILY SSF47384 220 301 1.73E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II0675 721352b631b6861e41a11996f613d876 461 SUPERFAMILY SSF55874 291 459 4.32E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0675 721352b631b6861e41a11996f613d876 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 458 5.0E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II0675 721352b631b6861e41a11996f613d876 461 Pfam PF00672 HAMP domain 182 228 5.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0675 721352b631b6861e41a11996f613d876 461 SUPERFAMILY SSF158472 183 233 1.01E-5 T 14-10-2018 VS_II0675 721352b631b6861e41a11996f613d876 461 SMART SM00304 181 236 2.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0675 721352b631b6861e41a11996f613d876 461 Gene3D G3DSA:1.10.287.130 185 302 1.4E-26 T 14-10-2018 VS_II0675 721352b631b6861e41a11996f613d876 461 Gene3D G3DSA:3.30.450.170 44 153 5.3E-6 T 14-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily VS_II0675 721352b631b6861e41a11996f613d876 461 Gene3D G3DSA:3.30.565.10 310 461 1.0E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II0675 721352b631b6861e41a11996f613d876 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0675 721352b631b6861e41a11996f613d876 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0675 721352b631b6861e41a11996f613d876 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0675 721352b631b6861e41a11996f613d876 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II0675 721352b631b6861e41a11996f613d876 461 SMART SM00388 237 301 1.8E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0675 721352b631b6861e41a11996f613d876 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 300 1.6E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1468 70feaf72981ca787279f06a5a419b3d1 316 Pfam PF00582 Universal stress protein family 4 148 2.6E-14 T 14-10-2018 IPR006016 UspA VS_1468 70feaf72981ca787279f06a5a419b3d1 316 Pfam PF00582 Universal stress protein family 177 301 2.0E-15 T 14-10-2018 IPR006016 UspA VS_1468 70feaf72981ca787279f06a5a419b3d1 316 SUPERFAMILY SSF52402 173 309 1.0E-22 T 14-10-2018 VS_1468 70feaf72981ca787279f06a5a419b3d1 316 SUPERFAMILY SSF52402 4 158 2.51E-26 T 14-10-2018 VS_1468 70feaf72981ca787279f06a5a419b3d1 316 Gene3D G3DSA:3.40.50.12370 1 312 1.7E-109 T 14-10-2018 VS_II0609 e0d698623f9172b642af475f27957d01 131 SUPERFAMILY SSF54909 36 124 3.96E-29 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0609 e0d698623f9172b642af475f27957d01 131 Gene3D G3DSA:3.30.70.100 34 131 3.4E-27 T 14-10-2018 VS_II0609 e0d698623f9172b642af475f27957d01 131 Pfam PF03992 Antibiotic biosynthesis monooxygenase 40 113 1.6E-15 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VS_II0749 281798723ec6af419e136ebfddd368a3 295 SUPERFAMILY SSF46785 3 84 2.64E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0749 281798723ec6af419e136ebfddd368a3 295 Gene3D G3DSA:1.10.10.10 5 90 2.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0749 281798723ec6af419e136ebfddd368a3 295 SUPERFAMILY SSF53850 97 289 8.51E-19 T 14-10-2018 VS_II0749 281798723ec6af419e136ebfddd368a3 295 Gene3D G3DSA:3.40.190.10 169 264 2.8E-8 T 14-10-2018 VS_II0749 281798723ec6af419e136ebfddd368a3 295 Pfam PF03466 LysR substrate binding domain 123 291 6.2E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0749 281798723ec6af419e136ebfddd368a3 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0749 281798723ec6af419e136ebfddd368a3 295 Gene3D G3DSA:3.40.190.10 133 280 2.8E-8 T 14-10-2018 VS_II0590 a4d53b633728812205fff8b9013416e3 226 SMART SM00862 150 224 7.2E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0590 a4d53b633728812205fff8b9013416e3 226 SUPERFAMILY SSF46894 124 224 2.3E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0590 a4d53b633728812205fff8b9013416e3 226 SUPERFAMILY SSF52172 6 133 2.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0590 a4d53b633728812205fff8b9013416e3 226 Gene3D G3DSA:3.40.50.2300 1 124 1.0E-35 T 14-10-2018 VS_II0590 a4d53b633728812205fff8b9013416e3 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 1.0E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0590 a4d53b633728812205fff8b9013416e3 226 Gene3D G3DSA:1.10.10.10 125 225 3.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0590 a4d53b633728812205fff8b9013416e3 226 SMART SM00448 7 118 1.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0590 a4d53b633728812205fff8b9013416e3 226 Pfam PF00072 Response regulator receiver domain 9 118 3.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1456 21998ce739286711c5690772d3bd4d49 574 SUPERFAMILY SSF52172 453 571 2.42E-38 T 14-10-2018 IPR011006 CheY-like superfamily VS_1456 21998ce739286711c5690772d3bd4d49 574 SMART SM00388 209 274 5.9E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1456 21998ce739286711c5690772d3bd4d49 574 Gene3D G3DSA:1.10.287.130 175 272 2.9E-28 T 14-10-2018 VS_1456 21998ce739286711c5690772d3bd4d49 574 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 430 6.3E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1456 21998ce739286711c5690772d3bd4d49 574 SUPERFAMILY SSF47384 195 274 4.32E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1456 21998ce739286711c5690772d3bd4d49 574 Gene3D G3DSA:3.40.50.12740 454 573 1.2E-39 T 14-10-2018 VS_1456 21998ce739286711c5690772d3bd4d49 574 Gene3D G3DSA:3.30.565.10 274 434 3.3E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1456 21998ce739286711c5690772d3bd4d49 574 Pfam PF00072 Response regulator receiver domain 456 567 9.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1456 21998ce739286711c5690772d3bd4d49 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 1.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1456 21998ce739286711c5690772d3bd4d49 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1456 21998ce739286711c5690772d3bd4d49 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 1.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1456 21998ce739286711c5690772d3bd4d49 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 1.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1456 21998ce739286711c5690772d3bd4d49 574 SMART SM00448 454 567 3.5E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1456 21998ce739286711c5690772d3bd4d49 574 SUPERFAMILY SSF55874 263 430 2.1E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1456 21998ce739286711c5690772d3bd4d49 574 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 274 2.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1456 21998ce739286711c5690772d3bd4d49 574 SMART SM00387 321 432 2.8E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2409 51ddf701113df507e081b0026b5e7af1 155 Gene3D G3DSA:1.10.940.10 3 155 1.8E-46 T 14-10-2018 IPR035926 NusB-like superfamily VS_2409 51ddf701113df507e081b0026b5e7af1 155 SUPERFAMILY SSF48013 7 153 3.14E-38 T 14-10-2018 IPR035926 NusB-like superfamily VS_2409 51ddf701113df507e081b0026b5e7af1 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 22.593 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 VS_2409 51ddf701113df507e081b0026b5e7af1 155 Pfam PF01029 NusB family 11 149 5.1E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VS_2409 51ddf701113df507e081b0026b5e7af1 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 6.0E-41 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 Pfam PF03466 LysR substrate binding domain 89 294 8.3E-29 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 Gene3D G3DSA:3.40.190.10 163 268 1.4E-16 T 14-10-2018 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 Gene3D G3DSA:3.40.190.10 91 281 1.4E-16 T 14-10-2018 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 SUPERFAMILY SSF46785 2 110 3.05E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 SUPERFAMILY SSF53850 87 293 1.93E-30 T 14-10-2018 VS_II1064 8f519868a518a04f4081584dcf2d02d1 296 Gene3D G3DSA:1.10.10.10 5 69 9.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2690 7752dbc423805620640348b4c02305f7 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 6.7E-130 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VS_2690 7752dbc423805620640348b4c02305f7 306 Pfam PF04960 Glutaminase 22 306 3.8E-112 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VS_2690 7752dbc423805620640348b4c02305f7 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.261 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VS_2690 7752dbc423805620640348b4c02305f7 306 Gene3D G3DSA:3.40.710.10 1 306 1.7E-109 T 14-10-2018 VS_2690 7752dbc423805620640348b4c02305f7 306 SUPERFAMILY SSF56601 3 306 4.01E-114 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_2744 32956c97692560ef55ae3e968425c048 422 Gene3D G3DSA:3.65.10.10 13 415 1.2E-171 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VS_2744 32956c97692560ef55ae3e968425c048 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 408 6.7E-122 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VS_2744 32956c97692560ef55ae3e968425c048 422 SUPERFAMILY SSF55205 7 419 1.64E-142 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VS_2744 32956c97692560ef55ae3e968425c048 422 Gene3D G3DSA:3.65.10.10 23 230 1.2E-171 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VS_2744 32956c97692560ef55ae3e968425c048 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 418 43.65 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_2744 32956c97692560ef55ae3e968425c048 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 417 4.1E-182 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_2750 c57e9ddd03658ff5046bc6b18fd00e47 279 Gene3D G3DSA:3.40.50.300 15 264 4.2E-68 T 14-10-2018 VS_2750 c57e9ddd03658ff5046bc6b18fd00e47 279 SUPERFAMILY SSF52540 17 249 8.4E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2750 c57e9ddd03658ff5046bc6b18fd00e47 279 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2750 c57e9ddd03658ff5046bc6b18fd00e47 279 SMART SM00382 42 248 5.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2750 c57e9ddd03658ff5046bc6b18fd00e47 279 Pfam PF00005 ABC transporter 34 181 4.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1669 6790a898b3de311bfede552a2cef924e 413 Pfam PF00589 Phage integrase family 214 376 7.8E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VS_1669 6790a898b3de311bfede552a2cef924e 413 Pfam PF13356 Arm DNA-binding domain 8 94 2.4E-19 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VS_1669 6790a898b3de311bfede552a2cef924e 413 Gene3D G3DSA:1.10.150.130 107 214 8.4E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VS_1669 6790a898b3de311bfede552a2cef924e 413 Gene3D G3DSA:1.10.443.10 215 393 4.4E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VS_1669 6790a898b3de311bfede552a2cef924e 413 Gene3D G3DSA:3.30.160.390 6 106 5.1E-32 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VS_1669 6790a898b3de311bfede552a2cef924e 413 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 159 4.5E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VS_1669 6790a898b3de311bfede552a2cef924e 413 SUPERFAMILY SSF56349 105 386 1.56E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 Gene3D G3DSA:3.40.50.300 1 280 2.8E-48 T 14-10-2018 VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 SMART SM00382 29 224 5.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 SMART SM00382 311 485 3.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 SUPERFAMILY SSF52540 2 254 7.61E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 SUPERFAMILY SSF52540 282 484 3.34E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 Gene3D G3DSA:3.40.50.300 281 486 1.9E-41 T 14-10-2018 VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 Pfam PF00005 ABC transporter 303 437 3.9E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1268 a5530742311700d8afe2c2d47d1482fc 486 Pfam PF00005 ABC transporter 21 170 2.1E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 SMART SM00650 25 197 1.8E-87 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.701 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 SUPERFAMILY SSF53335 8 266 1.97E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 2.2E-80 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 Gene3D G3DSA:1.10.8.100 200 266 3.6E-25 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 Gene3D G3DSA:3.40.50.150 1 198 1.5E-65 T 14-10-2018 VS_0370 66f67d93acd7cea43ac40f5949adf65c 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 3.0E-88 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VS_2545 13155789e94ddb99fab62666af786ed1 182 SMART SM00644 17 168 1.9E-51 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VS_2545 13155789e94ddb99fab62666af786ed1 182 SUPERFAMILY SSF55846 4 180 2.36E-64 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VS_2545 13155789e94ddb99fab62666af786ed1 182 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 168 9.5E-26 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VS_2545 13155789e94ddb99fab62666af786ed1 182 Gene3D G3DSA:3.40.80.10 3 181 1.2E-52 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VS_1599 b3192f92c8395c155d6475866c1d253f 137 Gene3D G3DSA:2.170.150.70 4 122 1.4E-15 T 14-10-2018 VS_1599 b3192f92c8395c155d6475866c1d253f 137 SUPERFAMILY SSF51316 3 126 1.15E-36 T 14-10-2018 IPR011057 Mss4-like superfamily VS_1599 b3192f92c8395c155d6475866c1d253f 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 109 1.8E-13 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 6.5E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 Pfam PF08281 Sigma-70, region 4 123 175 3.0E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 SUPERFAMILY SSF88659 120 180 2.4E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 SUPERFAMILY SSF88946 26 109 3.77E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 Pfam PF04542 Sigma-70 region 2 33 99 2.4E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 Gene3D G3DSA:1.10.10.10 118 181 2.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0863 fd526cafc4a68ecfb54eb54272f4e95c 191 Gene3D G3DSA:1.10.1740.10 13 95 3.6E-18 T 14-10-2018 VS_1530 476960ae861579e6b48cc28c9df27051 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 186 220 5.8E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VS_1530 476960ae861579e6b48cc28c9df27051 261 Gene3D G3DSA:2.160.10.10 2 254 8.8E-37 T 14-10-2018 VS_1530 476960ae861579e6b48cc28c9df27051 261 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 194 222 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_1530 476960ae861579e6b48cc28c9df27051 261 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 125 159 0.074 T 14-10-2018 IPR001451 Hexapeptide repeat VS_1530 476960ae861579e6b48cc28c9df27051 261 SUPERFAMILY SSF51161 93 239 7.07E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_0988 5a63da3492e65d76416581c43ecf49a4 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.3E-20 T 14-10-2018 VS_0988 5a63da3492e65d76416581c43ecf49a4 81 Gene3D G3DSA:3.10.20.30 1 81 3.3E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_0988 5a63da3492e65d76416581c43ecf49a4 81 Pfam PF02597 ThiS family 4 81 2.3E-22 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VS_0988 5a63da3492e65d76416581c43ecf49a4 81 SUPERFAMILY SSF54285 1 81 2.06E-21 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VS_1457 4a1522d471792127722b24ea976161c6 394 Pfam PF10442 FIST C domain 226 371 3.9E-18 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VS_1457 4a1522d471792127722b24ea976161c6 394 SMART SM00897 29 225 1.4E-33 T 14-10-2018 IPR013702 FIST domain, N-terminal VS_1457 4a1522d471792127722b24ea976161c6 394 Pfam PF08495 FIST N domain 33 224 1.0E-26 T 14-10-2018 IPR013702 FIST domain, N-terminal VS_1457 4a1522d471792127722b24ea976161c6 394 SMART SM01204 226 372 9.3E-29 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 SUPERFAMILY SSF143968 481 612 5.89E-36 T 14-10-2018 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 SUPERFAMILY SSF143968 323 459 7.98E-51 T 14-10-2018 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 4.0E-162 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 480 566 7.2E-21 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 7.2E-162 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 Gene3D G3DSA:3.40.1670.10 480 579 2.7E-26 T 14-10-2018 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 Gene3D G3DSA:3.40.1670.10 337 454 8.5E-45 T 14-10-2018 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 SUPERFAMILY SSF50475 3 322 4.32E-122 T 14-10-2018 VS_3069 b9f1ef7f5b4e5dae0bd799965b47b66b 613 Gene3D G3DSA:1.20.5.570 580 613 1.1E-14 T 14-10-2018 VS_II1481 5a59235efafc113519a4e079f2369374 307 PRINTS PR01755 Bacterial translocase SecF protein signature 196 214 1.8E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II1481 5a59235efafc113519a4e079f2369374 307 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 1.8E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II1481 5a59235efafc113519a4e079f2369374 307 PRINTS PR01755 Bacterial translocase SecF protein signature 228 243 1.8E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II1481 5a59235efafc113519a4e079f2369374 307 PRINTS PR01755 Bacterial translocase SecF protein signature 148 162 1.8E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II1481 5a59235efafc113519a4e079f2369374 307 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 76 277 3.5E-52 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VS_II1481 5a59235efafc113519a4e079f2369374 307 SUPERFAMILY SSF82866 101 280 2.22E-35 T 14-10-2018 VS_II1481 5a59235efafc113519a4e079f2369374 307 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 290 22.188 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VS_II1481 5a59235efafc113519a4e079f2369374 307 Gene3D G3DSA:1.20.1640.10 101 287 2.4E-11 T 14-10-2018 VS_II1481 5a59235efafc113519a4e079f2369374 307 Pfam PF02355 Protein export membrane protein 106 282 1.1E-55 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VS_II1481 5a59235efafc113519a4e079f2369374 307 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 278 1.9E-70 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VS_II1481 5a59235efafc113519a4e079f2369374 307 Pfam PF07549 SecD/SecF GG Motif 35 60 8.8E-9 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 SMART SM00354 53 126 3.5E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 ProSitePatterns PS00356 LacI-type HTH domain signature. 56 74 - T 14-10-2018 VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 116 307 1.4E-12 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 SUPERFAMILY SSF53822 114 371 1.12E-36 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 55 386 1.1E-135 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 Gene3D G3DSA:3.40.50.2300 115 207 1.9E-20 T 14-10-2018 VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 Gene3D G3DSA:1.10.260.40 54 114 5.2E-27 T 14-10-2018 VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 Pfam PF00356 Bacterial regulatory proteins, lacI family 55 103 7.8E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 Gene3D G3DSA:3.40.50.2300 208 387 3.2E-22 T 14-10-2018 VS_II1031 2173494722e8ccbe5590d170c19ddb7c 387 SUPERFAMILY SSF47413 54 111 5.0E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_0377 0b2f21bad7e444bf4aba355da7c5596e 200 SUPERFAMILY SSF52016 1 197 5.3E-61 T 14-10-2018 VS_0377 0b2f21bad7e444bf4aba355da7c5596e 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.389 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VS_0377 0b2f21bad7e444bf4aba355da7c5596e 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.2E-98 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VS_0377 0b2f21bad7e444bf4aba355da7c5596e 200 Gene3D G3DSA:3.20.19.10 1 180 8.7E-78 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VS_0377 0b2f21bad7e444bf4aba355da7c5596e 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.2E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VS_2844 120a62d89f0ab39764bdfb25ee7f0aba 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.862 T 14-10-2018 IPR007236 SlyX VS_2844 120a62d89f0ab39764bdfb25ee7f0aba 75 Gene3D G3DSA:1.20.5.300 1 52 4.6E-8 T 14-10-2018 VS_2844 120a62d89f0ab39764bdfb25ee7f0aba 75 Pfam PF04102 SlyX 9 75 5.4E-24 T 14-10-2018 IPR007236 SlyX VS_0191 87f4be9378760d7ebad35d1e16b9a4bd 297 SUPERFAMILY SSF53448 12 244 1.41E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_II0938 2c808bae1b61c19632d5a6608eb476e4 211 SUPERFAMILY SSF56925 22 211 3.92E-25 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_II0938 2c808bae1b61c19632d5a6608eb476e4 211 Pfam PF13505 Outer membrane protein beta-barrel domain 8 211 1.4E-21 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VS_II0938 2c808bae1b61c19632d5a6608eb476e4 211 Gene3D G3DSA:2.40.160.20 21 211 7.9E-25 T 14-10-2018 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.0E-165 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 Gene3D G3DSA:3.30.420.40 158 321 3.6E-131 T 14-10-2018 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 SUPERFAMILY SSF53067 9 152 1.78E-37 T 14-10-2018 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 Gene3D G3DSA:3.30.420.40 14 331 3.6E-131 T 14-10-2018 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 Gene3D G3DSA:3.90.640.10 190 263 3.6E-131 T 14-10-2018 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 Pfam PF06723 MreB/Mbl protein 11 338 1.4E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VS_0341 31c112bd0a3ef454f32d329f76a011ea 347 SUPERFAMILY SSF53067 154 340 1.39E-50 T 14-10-2018 VS_1958 55011911c2a4e266f74b0cea77d90370 255 SUPERFAMILY SSF81301 36 81 6.18E-7 T 14-10-2018 VS_1958 55011911c2a4e266f74b0cea77d90370 255 Gene3D G3DSA:3.30.460.10 7 103 4.4E-5 T 14-10-2018 VS_II0282 1e5d1ce6056781945ae6c84c8629be2c 113 Gene3D G3DSA:3.30.70.860 15 113 3.5E-39 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VS_II0282 1e5d1ce6056781945ae6c84c8629be2c 113 Pfam PF04175 Protein of unknown function (DUF406) 21 109 5.9E-29 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VS_II0508 a86d32191c488ab7d43f9648151f91ac 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_II0508 a86d32191c488ab7d43f9648151f91ac 211 SUPERFAMILY SSF51161 40 203 1.18E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_II0508 a86d32191c488ab7d43f9648151f91ac 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 7.1E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VS_II0508 a86d32191c488ab7d43f9648151f91ac 211 Gene3D G3DSA:2.160.10.10 2 209 4.6E-60 T 14-10-2018 VS_II0474 28a540a4cbdde05eb2d0574b82ae82ec 421 Gene3D G3DSA:3.40.50.300 168 414 1.4E-72 T 14-10-2018 VS_II0474 28a540a4cbdde05eb2d0574b82ae82ec 421 SUPERFAMILY SSF52540 56 362 2.43E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0474 28a540a4cbdde05eb2d0574b82ae82ec 421 Pfam PF00437 Type II/IV secretion system protein 71 347 8.6E-82 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_II0474 28a540a4cbdde05eb2d0574b82ae82ec 421 Gene3D G3DSA:3.30.450.380 1 166 1.1E-37 T 14-10-2018 VS_0832 3c5661bf3a0b289d7ec0f90ddfeedb32 146 Pfam PF04347 Flagellar biosynthesis protein, FliO 63 140 1.5E-16 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VS_0832 3c5661bf3a0b289d7ec0f90ddfeedb32 146 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 51 118 5.6E-21 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VS_2615 d8d8081e9c6df7c2eb2876c78798562f 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 126 1.8E-42 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VS_2615 d8d8081e9c6df7c2eb2876c78798562f 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 1.2E-23 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VS_2615 d8d8081e9c6df7c2eb2876c78798562f 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 3.0E-33 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VS_2615 d8d8081e9c6df7c2eb2876c78798562f 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.626 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VS_2615 d8d8081e9c6df7c2eb2876c78798562f 126 SUPERFAMILY SSF56214 3 125 1.7E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VS_2615 d8d8081e9c6df7c2eb2876c78798562f 126 Gene3D G3DSA:3.90.470.20 1 126 2.6E-41 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VS_2615 d8d8081e9c6df7c2eb2876c78798562f 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 4.2E-33 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VS_II1297 28036e455bc8dedfe846e22d4a1e5dda 278 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 113 264 4.5E-23 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain VS_II1297 28036e455bc8dedfe846e22d4a1e5dda 278 Gene3D G3DSA:3.40.50.1110 76 278 9.2E-41 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VS_II1297 28036e455bc8dedfe846e22d4a1e5dda 278 SUPERFAMILY SSF52266 89 277 4.58E-44 T 14-10-2018 VS_0714 ea637dec8b86904c733aa0d87869504e 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.2E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VS_0714 ea637dec8b86904c733aa0d87869504e 156 SUPERFAMILY SSF75217 1 154 1.52E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_0714 ea637dec8b86904c733aa0d87869504e 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.697 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VS_0714 ea637dec8b86904c733aa0d87869504e 156 Gene3D G3DSA:3.40.1280.10 1 156 1.5E-52 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_0714 ea637dec8b86904c733aa0d87869504e 156 PIRSF PIRSF004505 1 155 2.0E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VS_0714 ea637dec8b86904c733aa0d87869504e 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 2.8E-78 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VS_II0320 997ef9f148ad1e196b67129e154a8582 451 Pfam PF03924 CHASE domain 111 220 3.8E-15 T 14-10-2018 IPR006189 CHASE domain VS_II0320 997ef9f148ad1e196b67129e154a8582 451 SMART SM00267 282 451 2.9E-40 T 14-10-2018 IPR000160 GGDEF domain VS_II0320 997ef9f148ad1e196b67129e154a8582 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 448 6.0E-44 T 14-10-2018 IPR000160 GGDEF domain VS_II0320 997ef9f148ad1e196b67129e154a8582 451 Gene3D G3DSA:3.30.70.270 290 450 7.2E-50 T 14-10-2018 VS_II0320 997ef9f148ad1e196b67129e154a8582 451 SUPERFAMILY SSF55073 299 449 1.73E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0320 997ef9f148ad1e196b67129e154a8582 451 SMART SM01079 47 223 7.7E-31 T 14-10-2018 IPR006189 CHASE domain VS_II0320 997ef9f148ad1e196b67129e154a8582 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 449 3.7E-43 T 14-10-2018 IPR000160 GGDEF domain VS_II0843 eb85bbe8415bc124a725373e77faa659 192 Gene3D G3DSA:3.90.280.10 25 192 7.0E-51 T 14-10-2018 IPR036610 PEBP-like superfamily VS_II0843 eb85bbe8415bc124a725373e77faa659 192 Pfam PF01161 Phosphatidylethanolamine-binding protein 56 190 8.7E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VS_II0843 eb85bbe8415bc124a725373e77faa659 192 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 59 190 1.1E-37 T 14-10-2018 IPR005247 YbhB/YbcL VS_II0843 eb85bbe8415bc124a725373e77faa659 192 SUPERFAMILY SSF49777 37 192 1.07E-47 T 14-10-2018 IPR036610 PEBP-like superfamily VS_1510 57769521e0c1835655f68c937a9a600d 681 Gene3D G3DSA:1.10.287.950 352 680 1.7E-56 T 14-10-2018 VS_1510 57769521e0c1835655f68c937a9a600d 681 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 463 645 2.1E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1510 57769521e0c1835655f68c937a9a600d 681 SUPERFAMILY SSF58104 371 677 5.1E-56 T 14-10-2018 VS_1510 57769521e0c1835655f68c937a9a600d 681 SMART SM00283 418 679 1.4E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0897 a126f9700020a56f606c41baa9866840 75 Pfam PF09016 Pas factor saposin fold 3 74 1.7E-38 T 14-10-2018 IPR015106 Pas factor saposin domain VS_II0897 a126f9700020a56f606c41baa9866840 75 Gene3D G3DSA:1.20.1280.100 1 72 4.9E-30 T 14-10-2018 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 Pfam PF00675 Insulinase (Peptidase family M16) 50 163 3.8E-27 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 SUPERFAMILY SSF63411 503 717 1.92E-24 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 Pfam PF05193 Peptidase M16 inactive domain 673 851 4.0E-13 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 Pfam PF05193 Peptidase M16 inactive domain 201 378 6.6E-13 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 Gene3D G3DSA:3.30.830.10 31 252 2.0E-61 T 14-10-2018 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 SUPERFAMILY SSF63411 761 911 9.53E-16 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 Gene3D G3DSA:3.30.830.10 270 473 9.0E-8 T 14-10-2018 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 Gene3D G3DSA:3.30.830.10 732 912 7.2E-16 T 14-10-2018 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 63 86 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 Gene3D G3DSA:3.30.830.10 510 719 3.6E-19 T 14-10-2018 VS_II1486 50fc3f6d10e74cb8d0616c2bdab5a47c 920 SUPERFAMILY SSF63411 33 240 3.49E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 SMART SM00849 126 345 2.5E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 SUPERFAMILY SSF55718 530 650 5.47E-15 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 Gene3D G3DSA:3.60.15.30 23 380 9.5E-98 T 14-10-2018 VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 Gene3D G3DSA:3.30.1050.10 525 656 2.5E-23 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 Pfam PF14863 Alkyl sulfatase dimerisation 382 519 2.7E-41 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 SUPERFAMILY SSF56281 92 520 1.06E-96 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 Pfam PF14864 Alkyl sulfatase C-terminal 530 648 2.6E-12 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 Gene3D G3DSA:1.25.40.880 381 520 1.6E-42 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VS_2101 2cfbb80b4539bd20ab4bd621c4bb2ba4 658 Pfam PF00753 Metallo-beta-lactamase superfamily 130 345 9.1E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_II0883 61c994ed03835dc92e92477c3fb050e0 165 SMART SM00554 66 165 2.4E-33 T 14-10-2018 IPR000782 FAS1 domain VS_II0883 61c994ed03835dc92e92477c3fb050e0 165 SUPERFAMILY SSF82153 31 164 3.92E-44 T 14-10-2018 IPR036378 FAS1 domain superfamily VS_II0883 61c994ed03835dc92e92477c3fb050e0 165 Pfam PF02469 Fasciclin domain 42 164 7.2E-37 T 14-10-2018 IPR000782 FAS1 domain VS_II0883 61c994ed03835dc92e92477c3fb050e0 165 Gene3D G3DSA:2.30.180.10 7 165 1.8E-50 T 14-10-2018 IPR036378 FAS1 domain superfamily VS_1193 93b198f1bca9ad39a007321af6167061 223 Gene3D G3DSA:3.40.50.880 1 223 3.3E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_1193 93b198f1bca9ad39a007321af6167061 223 Pfam PF01965 DJ-1/PfpI family 27 221 2.4E-15 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VS_1193 93b198f1bca9ad39a007321af6167061 223 SUPERFAMILY SSF52317 1 222 3.23E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_0001 be4e7cc3f41cc82c98fb8e638819aa5b 155 Pfam PF00258 Flavodoxin 15 147 9.0E-27 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VS_0001 be4e7cc3f41cc82c98fb8e638819aa5b 155 Gene3D G3DSA:3.40.50.360 11 155 1.9E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0001 be4e7cc3f41cc82c98fb8e638819aa5b 155 PRINTS PR00369 Flavodoxin signature 60 71 1.1E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0001 be4e7cc3f41cc82c98fb8e638819aa5b 155 PRINTS PR00369 Flavodoxin signature 115 134 1.1E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0001 be4e7cc3f41cc82c98fb8e638819aa5b 155 PRINTS PR00369 Flavodoxin signature 91 101 1.1E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0001 be4e7cc3f41cc82c98fb8e638819aa5b 155 PRINTS PR00369 Flavodoxin signature 14 27 1.1E-5 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VS_0001 be4e7cc3f41cc82c98fb8e638819aa5b 155 SUPERFAMILY SSF52218 13 154 1.04E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 Pfam PF00312 Ribosomal protein S15 8 88 2.6E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-37 T 14-10-2018 VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.395 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 SUPERFAMILY SSF47060 3 89 5.59E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 Gene3D G3DSA:1.10.287.10 2 89 3.5E-35 T 14-10-2018 VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.3E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2479 99fdc024830ba9ee7be7b75b188fe0b6 89 SMART SM01387 8 88 5.2E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_II0994 431178fb5827376e78463b068aa96297 616 Pfam PF05947 Type VI secretion system, TssF 39 614 1.2E-186 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VS_II0994 431178fb5827376e78463b068aa96297 616 PIRSF PIRSF028304 35 616 2.7E-203 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VS_II0994 431178fb5827376e78463b068aa96297 616 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 38 616 4.3E-200 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VS_1724 79f2738265e11d15712c1e99256465e5 393 Gene3D G3DSA:3.40.640.10 59 290 1.6E-139 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1724 79f2738265e11d15712c1e99256465e5 393 Gene3D G3DSA:3.90.1150.10 21 381 1.6E-139 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1724 79f2738265e11d15712c1e99256465e5 393 Pfam PF00155 Aminotransferase class I and II 45 378 2.1E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_1724 79f2738265e11d15712c1e99256465e5 393 SUPERFAMILY SSF53383 34 385 8.25E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2915 3e259ea93f85268b45eb17de54984f2c 169 PIRSF PIRSF034445 1 160 5.7E-24 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VS_2915 3e259ea93f85268b45eb17de54984f2c 169 Gene3D G3DSA:1.20.120.1490 33 155 7.7E-29 T 14-10-2018 VS_2915 3e259ea93f85268b45eb17de54984f2c 169 Pfam PF07813 LTXXQ motif family protein 44 149 2.2E-20 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VS_II0461 f182b3b573852310f863d4c1a87ad841 691 Gene3D G3DSA:3.40.50.300 345 507 6.4E-22 T 14-10-2018 VS_II0461 f182b3b573852310f863d4c1a87ad841 691 Gene3D G3DSA:3.40.50.300 194 344 4.6E-29 T 14-10-2018 VS_II0461 f182b3b573852310f863d4c1a87ad841 691 Pfam PF13361 UvrD-like helicase C-terminal domain 598 669 2.9E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VS_II0461 f182b3b573852310f863d4c1a87ad841 691 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 2.4E-43 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VS_II0461 f182b3b573852310f863d4c1a87ad841 691 SUPERFAMILY SSF52540 198 679 1.49E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0461 f182b3b573852310f863d4c1a87ad841 691 Gene3D G3DSA:3.40.50.300 508 686 2.3E-28 T 14-10-2018 VS_II0461 f182b3b573852310f863d4c1a87ad841 691 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 1.6E-53 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 Gene3D G3DSA:1.10.101.10 475 541 3.5E-17 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 Pfam PF01471 Putative peptidoglycan binding domain 482 537 1.0E-5 T 14-10-2018 IPR002477 Peptidoglycan binding-like VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 Gene3D G3DSA:3.40.50.300 25 184 1.7E-15 T 14-10-2018 VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 Pfam PF13401 AAA domain 42 169 7.2E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 SMART SM00382 42 195 3.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 SUPERFAMILY SSF52540 6 263 4.26E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 SUPERFAMILY SSF47090 471 542 3.14E-11 T 14-10-2018 IPR036365 PGBD-like superfamily VS_0408 36fb4dc0d8531c23106f2e6b0e2d6ea8 556 Gene3D G3DSA:3.90.70.10 359 474 1.6E-27 T 14-10-2018 VS_0144 a26ec311cba4c105c6e080d88ec31f10 160 Pfam PF04612 Type II secretion system (T2SS), protein M 6 159 5.6E-54 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VS_0144 a26ec311cba4c105c6e080d88ec31f10 160 PIRSF PIRSF006291 2 160 1.0E-37 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VS_0144 a26ec311cba4c105c6e080d88ec31f10 160 SUPERFAMILY SSF103054 84 159 6.02E-23 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VS_0144 a26ec311cba4c105c6e080d88ec31f10 160 Gene3D G3DSA:3.30.1360.100 84 160 5.4E-28 T 14-10-2018 VS_0099 6002b9434656434c45113f04498f0cdb 201 Gene3D G3DSA:3.30.1050.10 7 118 1.7E-5 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_0099 6002b9434656434c45113f04498f0cdb 201 Pfam PF02036 SCP-2 sterol transfer family 16 111 6.5E-23 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VS_0099 6002b9434656434c45113f04498f0cdb 201 SUPERFAMILY SSF55718 28 118 1.51E-9 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_II0039 c267645940be25ddba67e2b76e24d2cb 313 Pfam PF00294 pfkB family carbohydrate kinase 23 306 3.2E-49 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VS_II0039 c267645940be25ddba67e2b76e24d2cb 313 Gene3D G3DSA:3.40.1190.20 4 313 2.3E-70 T 14-10-2018 IPR029056 Ribokinase-like VS_II0039 c267645940be25ddba67e2b76e24d2cb 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VS_II0039 c267645940be25ddba67e2b76e24d2cb 313 SUPERFAMILY SSF53613 6 312 1.48E-66 T 14-10-2018 IPR029056 Ribokinase-like VS_II1042 001757ab04dac56568aafbdda83e0117 224 SUPERFAMILY SSF46894 124 219 2.55E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II1042 001757ab04dac56568aafbdda83e0117 224 SMART SM00862 146 219 5.5E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II1042 001757ab04dac56568aafbdda83e0117 224 SMART SM00448 3 114 1.2E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1042 001757ab04dac56568aafbdda83e0117 224 Gene3D G3DSA:1.10.10.10 121 223 1.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1042 001757ab04dac56568aafbdda83e0117 224 SUPERFAMILY SSF52172 2 124 3.98E-38 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1042 001757ab04dac56568aafbdda83e0117 224 Gene3D G3DSA:3.40.50.2300 1 120 4.9E-37 T 14-10-2018 VS_II1042 001757ab04dac56568aafbdda83e0117 224 Pfam PF00072 Response regulator receiver domain 6 113 1.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1042 001757ab04dac56568aafbdda83e0117 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 216 2.5E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2663 254b7d87f8a736e624c11592bcdba143 432 Gene3D G3DSA:3.40.1010.10 15 116 4.2E-16 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VS_2663 254b7d87f8a736e624c11592bcdba143 432 SUPERFAMILY SSF53335 243 392 5.01E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2663 254b7d87f8a736e624c11592bcdba143 432 Pfam PF02390 Putative methyltransferase 275 339 4.4E-5 T 14-10-2018 VS_2663 254b7d87f8a736e624c11592bcdba143 432 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 20 223 7.7E-51 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 VS_2663 254b7d87f8a736e624c11592bcdba143 432 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 18 211 1.0E-25 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VS_2663 254b7d87f8a736e624c11592bcdba143 432 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 256 377 1.0E-34 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 VS_2663 254b7d87f8a736e624c11592bcdba143 432 Gene3D G3DSA:3.40.50.150 239 430 2.7E-60 T 14-10-2018 VS_2663 254b7d87f8a736e624c11592bcdba143 432 PIRSF PIRSF036428 14 428 7.8E-100 T 14-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 VS_2663 254b7d87f8a736e624c11592bcdba143 432 SUPERFAMILY SSF53790 18 226 1.44E-36 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VS_1102 d6f93ab5ff99e96016da110571d903c2 242 Pfam PF13649 Methyltransferase domain 60 158 4.6E-13 T 14-10-2018 VS_1102 d6f93ab5ff99e96016da110571d903c2 242 Gene3D G3DSA:3.40.50.150 18 242 9.6E-62 T 14-10-2018 VS_1102 d6f93ab5ff99e96016da110571d903c2 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.667 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VS_1102 d6f93ab5ff99e96016da110571d903c2 242 PIRSF PIRSF006325 1 242 3.4E-122 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VS_1102 d6f93ab5ff99e96016da110571d903c2 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 242 1.1E-115 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VS_1102 d6f93ab5ff99e96016da110571d903c2 242 SUPERFAMILY SSF53335 20 242 6.1E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II0268 914bf1817eef944f7b379d1501775089 190 Gene3D G3DSA:2.170.170.11 16 134 8.1E-27 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0268 914bf1817eef944f7b379d1501775089 190 SUPERFAMILY SSF51645 22 184 1.44E-17 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0494 af1a17d21c7ef4352c74ba7acdfc4301 179 SUPERFAMILY SSF52980 2 178 7.24E-67 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VS_II0494 af1a17d21c7ef4352c74ba7acdfc4301 179 Gene3D G3DSA:3.10.640.10 1 179 1.0E-68 T 14-10-2018 IPR038590 YaeQ superfamily VS_II0494 af1a17d21c7ef4352c74ba7acdfc4301 179 SMART SM01322 1 174 3.1E-107 T 14-10-2018 IPR009822 YaeQ VS_II0494 af1a17d21c7ef4352c74ba7acdfc4301 179 Pfam PF07152 YaeQ protein 1 172 4.6E-70 T 14-10-2018 IPR009822 YaeQ VS_II0494 af1a17d21c7ef4352c74ba7acdfc4301 179 PIRSF PIRSF011484 1 179 9.2E-69 T 14-10-2018 IPR009822 YaeQ VS_2431 29a1fc0a8b82cd735b46bd50b4862b80 236 SUPERFAMILY SSF53335 49 192 1.81E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2431 29a1fc0a8b82cd735b46bd50b4862b80 236 Gene3D G3DSA:3.40.50.150 46 204 2.8E-27 T 14-10-2018 VS_2431 29a1fc0a8b82cd735b46bd50b4862b80 236 Pfam PF08241 Methyltransferase domain 57 153 5.3E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VS_1022 950a8f62a6ffbad5a68d1084b5a5ffc9 316 SUPERFAMILY SSF53901 3 315 1.37E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_1022 950a8f62a6ffbad5a68d1084b5a5ffc9 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 9.6E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_1022 950a8f62a6ffbad5a68d1084b5a5ffc9 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.1E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_1022 950a8f62a6ffbad5a68d1084b5a5ffc9 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 5.9E-143 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_1022 950a8f62a6ffbad5a68d1084b5a5ffc9 316 Gene3D G3DSA:3.40.47.10 1 316 2.2E-127 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VS_1022 950a8f62a6ffbad5a68d1084b5a5ffc9 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.745 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VS_0627 c5a892a867f3c6f7b0e40f5a32168ed5 492 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 48 484 30.339 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VS_0627 c5a892a867f3c6f7b0e40f5a32168ed5 492 Pfam PF02601 Exonuclease VII, large subunit 167 481 2.5E-98 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VS_0627 c5a892a867f3c6f7b0e40f5a32168ed5 492 Pfam PF13742 OB-fold nucleic acid binding domain 51 144 2.5E-30 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VS_0627 c5a892a867f3c6f7b0e40f5a32168ed5 492 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 52 397 2.6E-133 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VS_1576 fc1775419a3d433dca63e38eb6c51bf8 208 Gene3D G3DSA:2.160.10.10 1 208 1.3E-76 T 14-10-2018 VS_1576 fc1775419a3d433dca63e38eb6c51bf8 208 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_1576 fc1775419a3d433dca63e38eb6c51bf8 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.6E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VS_1576 fc1775419a3d433dca63e38eb6c51bf8 208 SUPERFAMILY SSF51161 18 204 1.37E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 2.3E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 SUPERFAMILY SSF55804 1 147 3.27E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 177 500 7.4E-79 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 SUPERFAMILY SSF52794 526 618 4.53E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 8 133 2.4E-36 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 Gene3D G3DSA:3.40.930.10 1 148 4.1E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 616 6.8E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 Gene3D G3DSA:3.40.50.2300 520 621 1.0E-33 T 14-10-2018 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 Pfam PF02378 Phosphotransferase system, EIIC 190 447 1.1E-14 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_II1316 56831f3aa1a52c17c1e58b437662ea29 621 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 3.4E-28 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VS_II0832 29a56f6b85562c648c6751f9d3465e06 533 Pfam PF14491 Protein of unknown function (DUF4435) 291 432 2.1E-12 T 14-10-2018 IPR029492 Domain of unknown function DUF4435 VS_II0832 29a56f6b85562c648c6751f9d3465e06 533 SUPERFAMILY SSF52540 21 267 5.45E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0832 29a56f6b85562c648c6751f9d3465e06 533 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 185 235 9.9E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_II1181 54b6418a787587821037a12fff68e4e7 449 Gene3D G3DSA:3.30.565.10 308 447 3.1E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1181 54b6418a787587821037a12fff68e4e7 449 SMART SM00387 339 449 1.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1181 54b6418a787587821037a12fff68e4e7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 4.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1181 54b6418a787587821037a12fff68e4e7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 4.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1181 54b6418a787587821037a12fff68e4e7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 4.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1181 54b6418a787587821037a12fff68e4e7 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 4.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_II1181 54b6418a787587821037a12fff68e4e7 449 Gene3D G3DSA:1.10.287.130 183 295 3.4E-16 T 14-10-2018 VS_II1181 54b6418a787587821037a12fff68e4e7 449 SUPERFAMILY SSF55874 298 447 5.24E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1181 54b6418a787587821037a12fff68e4e7 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 292 3.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II1181 54b6418a787587821037a12fff68e4e7 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 446 4.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_II1181 54b6418a787587821037a12fff68e4e7 449 SUPERFAMILY SSF47384 214 293 1.45E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_II1181 54b6418a787587821037a12fff68e4e7 449 SMART SM00388 231 295 1.1E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 333 2.2E-138 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 7.2E-6 T 14-10-2018 VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 7.2E-6 T 14-10-2018 VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 7.2E-6 T 14-10-2018 VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 Gene3D G3DSA:3.40.50.720 3 273 6.2E-140 T 14-10-2018 VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 Gene3D G3DSA:3.90.25.10 193 328 6.2E-140 T 14-10-2018 VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 SUPERFAMILY SSF51735 1 333 1.05E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0752 ac283ea1b113321ef4a49a4da67aa910 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 3.0E-60 T 14-10-2018 IPR016040 NAD(P)-binding domain VS_II0229 6f868effa8c21bbbae1667d573afbf8d 616 Gene3D G3DSA:3.60.15.30 19 339 1.9E-73 T 14-10-2018 VS_II0229 6f868effa8c21bbbae1667d573afbf8d 616 Pfam PF00753 Metallo-beta-lactamase superfamily 94 197 4.2E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_II0229 6f868effa8c21bbbae1667d573afbf8d 616 SUPERFAMILY SSF56281 71 481 5.57E-77 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_II0229 6f868effa8c21bbbae1667d573afbf8d 616 Pfam PF14863 Alkyl sulfatase dimerisation 341 477 9.1E-37 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VS_II0229 6f868effa8c21bbbae1667d573afbf8d 616 Gene3D G3DSA:3.30.1050.10 481 614 5.7E-11 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_II0229 6f868effa8c21bbbae1667d573afbf8d 616 Gene3D G3DSA:1.25.40.880 340 480 9.6E-39 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VS_II0270 835e85184d80e588ab9b503a3329b30d 308 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 177 1.1E-6 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VS_II0270 835e85184d80e588ab9b503a3329b30d 308 Gene3D G3DSA:3.40.630.10 4 308 1.1E-118 T 14-10-2018 VS_II0270 835e85184d80e588ab9b503a3329b30d 308 SUPERFAMILY SSF53187 36 301 4.96E-36 T 14-10-2018 VS_0517 e38afc90307c95b58588172b946aba2f 510 SUPERFAMILY SSF55681 161 507 1.44E-115 T 14-10-2018 VS_0517 e38afc90307c95b58588172b946aba2f 510 Gene3D G3DSA:3.30.930.10 157 510 3.9E-129 T 14-10-2018 VS_0517 e38afc90307c95b58588172b946aba2f 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 3.2E-77 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0517 e38afc90307c95b58588172b946aba2f 510 Gene3D G3DSA:2.40.50.140 10 156 1.2E-28 T 14-10-2018 VS_0517 e38afc90307c95b58588172b946aba2f 510 SUPERFAMILY SSF50249 17 154 2.45E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0517 e38afc90307c95b58588172b946aba2f 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 5.0E-201 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_0517 e38afc90307c95b58588172b946aba2f 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.448 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_0517 e38afc90307c95b58588172b946aba2f 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 1.4E-6 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VS_0517 e38afc90307c95b58588172b946aba2f 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 7.2E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_0517 e38afc90307c95b58588172b946aba2f 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 7.2E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_0517 e38afc90307c95b58588172b946aba2f 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 7.2E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_0517 e38afc90307c95b58588172b946aba2f 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 7.2E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_0517 e38afc90307c95b58588172b946aba2f 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 7.2E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VS_1500 4c7e741e0a9c3dd48a660b303f3326b6 232 SUPERFAMILY SSF161098 17 222 1.05E-31 T 14-10-2018 IPR035906 MetI-like superfamily VS_1500 4c7e741e0a9c3dd48a660b303f3326b6 232 Gene3D G3DSA:1.10.3720.10 1 229 1.1E-30 T 14-10-2018 IPR035906 MetI-like superfamily VS_1500 4c7e741e0a9c3dd48a660b303f3326b6 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 1.8E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2839 bb9ae8ff0a8c3fed43881f064d299af7 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 118 5.8E-44 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF VS_2839 bb9ae8ff0a8c3fed43881f064d299af7 118 Gene3D G3DSA:3.40.1260.10 1 118 1.7E-35 T 14-10-2018 IPR027396 DsrEFH-like VS_2839 bb9ae8ff0a8c3fed43881f064d299af7 118 Pfam PF02635 DsrE/DsrF-like family 4 118 3.0E-26 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VS_2839 bb9ae8ff0a8c3fed43881f064d299af7 118 SUPERFAMILY SSF75169 2 118 7.91E-34 T 14-10-2018 IPR027396 DsrEFH-like VS_II1196 3ad5340ee6bf6f55eb47d9780f8fc2a8 570 SUPERFAMILY SSF55120 362 567 6.88E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_II1196 3ad5340ee6bf6f55eb47d9780f8fc2a8 570 Gene3D G3DSA:3.30.2350.10 358 569 1.8E-63 T 14-10-2018 VS_II1196 3ad5340ee6bf6f55eb47d9780f8fc2a8 570 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 414 428 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_II1196 3ad5340ee6bf6f55eb47d9780f8fc2a8 570 Pfam PF00849 RNA pseudouridylate synthase 375 523 5.1E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 Pfam PF03466 LysR substrate binding domain 91 292 8.7E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 SUPERFAMILY SSF46785 3 85 6.56E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.7E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 Gene3D G3DSA:3.40.190.10 163 261 5.4E-59 T 14-10-2018 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 Gene3D G3DSA:3.40.190.10 103 288 5.4E-59 T 14-10-2018 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 SUPERFAMILY SSF53850 92 296 1.81E-38 T 14-10-2018 VS_2399 12438c8c4969f1758aa9c0b194b272b2 302 Gene3D G3DSA:1.10.10.10 7 95 2.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0255 b4d2535e917241a9c556d824363ff854 181 SMART SM00479 7 180 5.5E-21 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_0255 b4d2535e917241a9c556d824363ff854 181 SUPERFAMILY SSF53098 3 179 1.14E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_0255 b4d2535e917241a9c556d824363ff854 181 Pfam PF00929 Exonuclease 9 170 8.5E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_0255 b4d2535e917241a9c556d824363ff854 181 Gene3D G3DSA:3.30.420.10 1 181 1.3E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_0255 b4d2535e917241a9c556d824363ff854 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.372 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 VS_3093 cd841f00361ae5988f0505a610c10e10 375 SUPERFAMILY SSF102114 37 367 3.01E-53 T 14-10-2018 VS_3093 cd841f00361ae5988f0505a610c10e10 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 2 371 3.3E-178 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 VS_3093 cd841f00361ae5988f0505a610c10e10 375 Gene3D G3DSA:3.20.20.70 14 370 3.3E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_3093 cd841f00361ae5988f0505a610c10e10 375 Pfam PF04055 Radical SAM superfamily 81 221 2.7E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_3093 cd841f00361ae5988f0505a610c10e10 375 SMART SM00876 256 364 3.0E-37 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VS_3093 cd841f00361ae5988f0505a610c10e10 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 7.5E-27 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 SUPERFAMILY SSF46609 1 83 9.82E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 Gene3D G3DSA:2.40.500.20 83 194 2.0E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 SUPERFAMILY SSF54719 85 193 5.24E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 9.2E-39 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.8E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 4.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 PIRSF PIRSF000349 1 194 9.4E-84 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_0961 4d5d12143b1df30eed531f2cd238baf1 194 Gene3D G3DSA:1.10.287.990 20 82 1.3E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_II0285 09276af30dd8abc919e10f751e174379 349 Pfam PF01032 FecCD transport family 23 342 5.9E-90 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II0285 09276af30dd8abc919e10f751e174379 349 SUPERFAMILY SSF81345 9 343 3.01E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0285 09276af30dd8abc919e10f751e174379 349 Gene3D G3DSA:1.10.3470.10 12 348 9.3E-105 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2758 b3e3f7240a6815ca927a1e58a6e41fc9 95 Gene3D G3DSA:3.30.160.100 1 95 4.1E-38 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VS_2758 b3e3f7240a6815ca927a1e58a6e41fc9 95 SUPERFAMILY SSF69754 1 95 1.57E-34 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VS_2758 b3e3f7240a6815ca927a1e58a6e41fc9 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.3E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VS_2758 b3e3f7240a6815ca927a1e58a6e41fc9 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.6E-33 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VS_II0586 6f899ba35e61341c273507c701c6a9b0 115 Pfam PF09361 Phasin protein 8 107 3.8E-17 T 14-10-2018 IPR018968 Phasin VS_II0586 6f899ba35e61341c273507c701c6a9b0 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 2.3E-47 T 14-10-2018 IPR014176 Phasin, subfamily 3 VS_1466 78147bdd4648b748d378bc044cb51b5d 224 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 211 4.2E-57 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VS_2852 9ff658612dfb3c3d89997548610aff5b 330 Pfam PF00561 alpha/beta hydrolase fold 66 306 4.5E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2852 9ff658612dfb3c3d89997548610aff5b 330 SUPERFAMILY SSF53474 22 305 2.95E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2852 9ff658612dfb3c3d89997548610aff5b 330 PIRSF PIRSF005211 2 330 3.5E-107 T 14-10-2018 IPR012020 AB hydrolase 4 family VS_2852 9ff658612dfb3c3d89997548610aff5b 330 Gene3D G3DSA:3.40.50.1820 26 310 6.0E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_0585 8a0c24e57e0f68b13e7683c28c7004b1 738 Gene3D G3DSA:1.10.3720.10 500 735 1.4E-20 T 14-10-2018 IPR035906 MetI-like superfamily VS_0585 8a0c24e57e0f68b13e7683c28c7004b1 738 SUPERFAMILY SSF69322 58 364 2.88E-9 T 14-10-2018 VS_0585 8a0c24e57e0f68b13e7683c28c7004b1 738 SUPERFAMILY SSF161098 434 675 2.99E-17 T 14-10-2018 IPR035906 MetI-like superfamily VS_0585 8a0c24e57e0f68b13e7683c28c7004b1 738 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 456 732 4.9E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0798 17881ce2d53bb79c952ee8a6c962c297 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 7.8E-51 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VS_0798 17881ce2d53bb79c952ee8a6c962c297 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.1E-38 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VS_0798 17881ce2d53bb79c952ee8a6c962c297 248 SMART SM00858 126 188 1.4E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VS_0798 17881ce2d53bb79c952ee8a6c962c297 248 Gene3D G3DSA:2.30.30.760 188 247 1.2E-11 T 14-10-2018 VS_II1084 1f645eeb143e5cd7317895e91352581f 647 Gene3D G3DSA:1.10.287.950 317 647 5.7E-68 T 14-10-2018 VS_II1084 1f645eeb143e5cd7317895e91352581f 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 604 1.5E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1084 1f645eeb143e5cd7317895e91352581f 647 SUPERFAMILY SSF58104 338 647 3.14E-67 T 14-10-2018 VS_II1084 1f645eeb143e5cd7317895e91352581f 647 SMART SM01358 36 289 2.8E-40 T 14-10-2018 IPR032255 Helical bimodular sensor domain VS_II1084 1f645eeb143e5cd7317895e91352581f 647 SMART SM00283 385 646 3.0E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1084 1f645eeb143e5cd7317895e91352581f 647 SMART SM00304 318 370 5.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0534 b084414b96bb4e198fbb2d132a8468e4 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0534 b084414b96bb4e198fbb2d132a8468e4 248 Gene3D G3DSA:3.40.50.300 9 248 3.8E-76 T 14-10-2018 VS_II0534 b084414b96bb4e198fbb2d132a8468e4 248 SMART SM00382 36 219 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0534 b084414b96bb4e198fbb2d132a8468e4 248 Pfam PF00005 ABC transporter 27 171 3.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0534 b084414b96bb4e198fbb2d132a8468e4 248 PIRSF PIRSF039085 8 247 8.0E-103 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VS_II0534 b084414b96bb4e198fbb2d132a8468e4 248 SUPERFAMILY SSF52540 11 241 1.24E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0625 8feefa1329c18a900d05dd94232bd88a 204 SUPERFAMILY SSF52833 42 197 9.96E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0625 8feefa1329c18a900d05dd94232bd88a 204 Pfam PF08534 Redoxin 53 194 4.9E-15 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VS_II0625 8feefa1329c18a900d05dd94232bd88a 204 Gene3D G3DSA:3.40.30.10 32 202 1.2E-25 T 14-10-2018 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.571 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 110 0.003 T 14-10-2018 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 2.4E-54 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 Pfam PF01467 Cytidylyltransferase-like 5 133 9.0E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 Gene3D G3DSA:3.40.50.620 1 162 4.1E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 9.1E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 9.1E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 9.1E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 9.1E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 9.1E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 61 3.5E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VS_0195 3507ad4aaf3401faf90a59a82614e75f 162 SUPERFAMILY SSF52374 1 154 2.95E-41 T 14-10-2018 VS_0174 0056fd1020a595e04b1294b24d22703e 258 SMART SM01134 81 239 4.9E-31 T 14-10-2018 VS_0174 0056fd1020a595e04b1294b24d22703e 258 Pfam PF00455 DeoR C terminal sensor domain 84 237 5.6E-32 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VS_0174 0056fd1020a595e04b1294b24d22703e 258 SUPERFAMILY SSF100950 86 238 4.08E-18 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_0174 0056fd1020a595e04b1294b24d22703e 258 SUPERFAMILY SSF46785 5 63 8.77E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0174 0056fd1020a595e04b1294b24d22703e 258 SMART SM00420 6 58 3.4E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_0174 0056fd1020a595e04b1294b24d22703e 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VS_0174 0056fd1020a595e04b1294b24d22703e 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.0E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_II1528 281de2476d4b46528ef08da4b45a5ec3 277 SUPERFAMILY SSF52540 13 261 4.85E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1528 281de2476d4b46528ef08da4b45a5ec3 277 Gene3D G3DSA:3.40.50.300 11 276 7.1E-86 T 14-10-2018 VS_II1528 281de2476d4b46528ef08da4b45a5ec3 277 Pfam PF00005 ABC transporter 34 189 3.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1528 281de2476d4b46528ef08da4b45a5ec3 277 SMART SM00382 42 247 3.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1528 281de2476d4b46528ef08da4b45a5ec3 277 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2463 c30cdddfef45a1bedbbbe8efd180d6ff 258 SUPERFAMILY SSF51569 6 245 8.48E-81 T 14-10-2018 VS_2463 c30cdddfef45a1bedbbbe8efd180d6ff 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 51.326 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VS_2463 c30cdddfef45a1bedbbbe8efd180d6ff 258 Gene3D G3DSA:3.20.20.70 1 257 3.2E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2463 c30cdddfef45a1bedbbbe8efd180d6ff 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 3.4E-47 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VS_2463 c30cdddfef45a1bedbbbe8efd180d6ff 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 7.8E-81 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VS_2463 c30cdddfef45a1bedbbbe8efd180d6ff 258 SMART SM01133 10 244 8.4E-77 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VS_2463 c30cdddfef45a1bedbbbe8efd180d6ff 258 PIRSF PIRSF001357 5 252 1.3E-76 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VS_1593 06699ad2ef143ca18940152fd2fd4029 205 Pfam PF03737 Aldolase/RraA 26 158 3.3E-39 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VS_1593 06699ad2ef143ca18940152fd2fd4029 205 Gene3D G3DSA:3.50.30.100 1 181 1.6E-45 T 14-10-2018 VS_1593 06699ad2ef143ca18940152fd2fd4029 205 SUPERFAMILY SSF89562 8 167 1.03E-39 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VS_2021 22498a4548c2798f2ac80545943eaf5a 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.595 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VS_2021 22498a4548c2798f2ac80545943eaf5a 245 Gene3D G3DSA:3.20.20.70 1 245 2.1E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2021 22498a4548c2798f2ac80545943eaf5a 245 SUPERFAMILY SSF51366 1 242 5.72E-64 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_2021 22498a4548c2798f2ac80545943eaf5a 245 Pfam PF00977 Histidine biosynthesis protein 1 234 3.2E-75 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VS_2021 22498a4548c2798f2ac80545943eaf5a 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 2.2E-77 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VS_0775 5aad251b1ae70cd63cc1422d696eaa91 790 Pfam PF03176 MMPL family 194 414 4.0E-9 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VS_0775 5aad251b1ae70cd63cc1422d696eaa91 790 SUPERFAMILY SSF82866 231 408 3.66E-18 T 14-10-2018 VS_0775 5aad251b1ae70cd63cc1422d696eaa91 790 SUPERFAMILY SSF82866 649 771 1.23E-19 T 14-10-2018 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 SUPERFAMILY SSF51569 20 307 1.88E-99 T 14-10-2018 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 SMART SM01130 20 309 2.5E-140 T 14-10-2018 IPR002220 DapA-like GO:0016829 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 23 306 1.5E-115 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 Pfam PF00701 Dihydrodipicolinate synthetase family 21 307 2.2E-111 T 14-10-2018 IPR002220 DapA-like GO:0016829 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 20 307 65.222 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 PIRSF PIRSF001365 17 309 1.8E-92 T 14-10-2018 IPR002220 DapA-like GO:0016829 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 57 74 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 Gene3D G3DSA:3.20.20.70 19 310 4.2E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 152 182 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 122 138 3.7E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 147 164 3.7E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 54 75 3.7E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VS_2305 5ab8d229b10602bea7075a90dd6bdf9f 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 90 108 3.7E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VS_2532 7d3f28bf5285debd3d34963a3f5914f3 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 3.5E-106 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VS_2532 7d3f28bf5285debd3d34963a3f5914f3 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 6.7E-112 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VS_2532 7d3f28bf5285debd3d34963a3f5914f3 264 SUPERFAMILY SSF51621 3 262 2.06E-103 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_2532 7d3f28bf5285debd3d34963a3f5914f3 264 Gene3D G3DSA:3.20.20.60 1 263 5.0E-104 T 14-10-2018 VS_2532 7d3f28bf5285debd3d34963a3f5914f3 264 PIRSF PIRSF000388 1 264 1.4E-98 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VS_2532 7d3f28bf5285debd3d34963a3f5914f3 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 40.496 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VS_II0215 4c21ec0a3362cc96c66c3d8aa81f86c1 318 PIRSF PIRSF002849 1 318 4.1E-128 T 14-10-2018 VS_II0215 4c21ec0a3362cc96c66c3d8aa81f86c1 318 Gene3D G3DSA:1.10.8.300 200 315 2.3E-38 T 14-10-2018 VS_II0215 4c21ec0a3362cc96c66c3d8aa81f86c1 318 SUPERFAMILY SSF52540 6 292 3.22E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0215 4c21ec0a3362cc96c66c3d8aa81f86c1 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 6.4E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VS_II0215 4c21ec0a3362cc96c66c3d8aa81f86c1 318 Gene3D G3DSA:3.40.50.300 17 183 6.3E-47 T 14-10-2018 VS_2341 d4cad576c22043448ca5a0ff81540a4d 150 Pfam PF07977 FabA-like domain 17 141 1.2E-40 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_2341 d4cad576c22043448ca5a0ff81540a4d 150 SUPERFAMILY SSF54637 6 146 2.16E-49 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2341 d4cad576c22043448ca5a0ff81540a4d 150 Gene3D G3DSA:3.10.129.10 2 150 1.6E-62 T 14-10-2018 VS_2341 d4cad576c22043448ca5a0ff81540a4d 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 1.0E-59 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_2341 d4cad576c22043448ca5a0ff81540a4d 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.026 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_II1417 25d350cdf34f8b8a7866ed13f27f3be6 197 Gene3D G3DSA:1.10.357.10 49 193 6.3E-22 T 14-10-2018 VS_II1417 25d350cdf34f8b8a7866ed13f27f3be6 197 Gene3D G3DSA:1.10.10.60 1 47 2.6E-19 T 14-10-2018 VS_II1417 25d350cdf34f8b8a7866ed13f27f3be6 197 SUPERFAMILY SSF46689 3 69 1.6E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1417 25d350cdf34f8b8a7866ed13f27f3be6 197 SUPERFAMILY SSF48498 80 193 1.48E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_II1417 25d350cdf34f8b8a7866ed13f27f3be6 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II1417 25d350cdf34f8b8a7866ed13f27f3be6 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II1417 25d350cdf34f8b8a7866ed13f27f3be6 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 2.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_3078 c492c262ead03ba35a2c2e91fbdea112 302 SUPERFAMILY SSF103481 50 146 1.16E-13 T 14-10-2018 VS_3078 c492c262ead03ba35a2c2e91fbdea112 302 Pfam PF00892 EamA-like transporter family 12 145 8.4E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_3078 c492c262ead03ba35a2c2e91fbdea112 302 TIGRFAM TIGR00688 rarD: protein RarD 11 264 5.7E-88 T 14-10-2018 IPR004626 RarD protein GO:0005887 VS_3078 c492c262ead03ba35a2c2e91fbdea112 302 SUPERFAMILY SSF103481 208 291 2.22E-8 T 14-10-2018 VS_1460 b4b9606bdb6b9b7deb9b29ecfb01e9da 206 Gene3D G3DSA:1.10.760.10 46 206 2.6E-71 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1460 b4b9606bdb6b9b7deb9b29ecfb01e9da 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.1E-80 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VS_1460 b4b9606bdb6b9b7deb9b29ecfb01e9da 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 9.7E-82 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VS_1460 b4b9606bdb6b9b7deb9b29ecfb01e9da 206 SUPERFAMILY SSF46626 21 202 1.43E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 21 212 4.6E-86 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00096 Glutamine amidotransferase superfamily signature 189 202 8.3E-13 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00096 Glutamine amidotransferase superfamily signature 67 76 8.3E-13 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00096 Glutamine amidotransferase superfamily signature 94 105 8.3E-13 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 Pfam PF00117 Glutamine amidotransferase class-I 24 210 3.6E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 SUPERFAMILY SSF52317 21 211 3.7E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 Gene3D G3DSA:3.40.50.880 21 212 8.2E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00097 Anthranilate synthase component II signature 22 36 7.2E-36 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00097 Anthranilate synthase component II signature 67 76 7.2E-36 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00097 Anthranilate synthase component II signature 94 105 7.2E-36 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00097 Anthranilate synthase component II signature 139 151 7.2E-36 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00097 Anthranilate synthase component II signature 119 127 7.2E-36 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00097 Anthranilate synthase component II signature 189 202 7.2E-36 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 94 110 7.9E-5 T 14-10-2018 VS_2862 99504467f4f3bfac11198a59bea6a6dd 212 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 64 78 7.9E-5 T 14-10-2018 VS_II0038 c4768d6b7a53494596c61cc41ef613b1 504 Gene3D G3DSA:1.20.1730.10 7 487 3.1E-73 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VS_II0038 c4768d6b7a53494596c61cc41ef613b1 504 Pfam PF00474 Sodium:solute symporter family 34 417 2.1E-43 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VS_II1148 226859e615303f139b1e5abd3f02f278 410 Pfam PF01546 Peptidase family M20/M25/M40 139 401 1.6E-12 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VS_II1148 226859e615303f139b1e5abd3f02f278 410 Gene3D G3DSA:3.30.70.360 209 319 2.0E-170 T 14-10-2018 VS_II1148 226859e615303f139b1e5abd3f02f278 410 PIRSF PIRSF037215 1 408 6.0E-179 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VS_II1148 226859e615303f139b1e5abd3f02f278 410 SUPERFAMILY SSF55031 209 319 4.5E-38 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VS_II1148 226859e615303f139b1e5abd3f02f278 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 404 9.5E-159 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VS_II1148 226859e615303f139b1e5abd3f02f278 410 SUPERFAMILY SSF53187 1 400 1.02E-74 T 14-10-2018 VS_II1148 226859e615303f139b1e5abd3f02f278 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VS_II1148 226859e615303f139b1e5abd3f02f278 410 Pfam PF07687 Peptidase dimerisation domain 207 307 1.8E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VS_II1148 226859e615303f139b1e5abd3f02f278 410 Gene3D G3DSA:3.40.630.10 4 400 2.0E-170 T 14-10-2018 VS_II1148 226859e615303f139b1e5abd3f02f278 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VS_II1148 226859e615303f139b1e5abd3f02f278 410 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.388 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VS_2019 d0abb306adea439e5a009e79d048d93c 216 Gene3D G3DSA:1.10.287.1080 125 216 5.1E-30 T 14-10-2018 VS_2019 d0abb306adea439e5a009e79d048d93c 216 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 18 216 37.517 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VS_2019 d0abb306adea439e5a009e79d048d93c 216 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 43 115 6.8E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VS_2019 d0abb306adea439e5a009e79d048d93c 216 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 66 115 6.0E-22 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VS_2019 d0abb306adea439e5a009e79d048d93c 216 SUPERFAMILY SSF101386 128 215 1.24E-25 T 14-10-2018 VS_2019 d0abb306adea439e5a009e79d048d93c 216 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 128 211 3.9E-32 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VS_2019 d0abb306adea439e5a009e79d048d93c 216 SUPERFAMILY SSF141734 19 129 8.11E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VS_2019 d0abb306adea439e5a009e79d048d93c 216 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 128 215 1.9E-18 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VS_2019 d0abb306adea439e5a009e79d048d93c 216 Gene3D G3DSA:3.10.20.400 8 107 2.5E-36 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VS_2019 d0abb306adea439e5a009e79d048d93c 216 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 125 211 19.599 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VS_0227 059bc127b573a0299c94d33ddda4fb77 358 Gene3D G3DSA:3.90.25.10 200 339 1.7E-132 T 14-10-2018 VS_0227 059bc127b573a0299c94d33ddda4fb77 358 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 345 1.9E-152 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VS_0227 059bc127b573a0299c94d33ddda4fb77 358 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 331 5.6E-95 T 14-10-2018 IPR016040 NAD(P)-binding domain VS_0227 059bc127b573a0299c94d33ddda4fb77 358 Gene3D G3DSA:3.40.50.720 2 330 1.7E-132 T 14-10-2018 VS_0227 059bc127b573a0299c94d33ddda4fb77 358 SUPERFAMILY SSF51735 2 343 8.13E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 Gene3D G3DSA:3.40.50.80 121 282 1.7E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 Pfam PF00175 Oxidoreductase NAD-binding domain 136 257 2.3E-15 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 SUPERFAMILY SSF52343 130 282 1.07E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 Gene3D G3DSA:2.40.30.10 14 120 9.4E-26 T 14-10-2018 VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 SUPERFAMILY SSF63380 23 124 1.25E-19 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 70 77 5.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 182 193 5.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 135 154 5.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 243 251 5.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VS_II0152 97f1bf56371b3a8a90c4eeb05b7debf5 282 Pfam PF00970 Oxidoreductase FAD-binding domain 37 113 2.3E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VS_II0910 317e24ae8d9a15e915f7e0a0d5a3862a 156 Pfam PF00430 ATP synthase B/B' CF(0) 8 136 5.0E-25 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VS_II0910 317e24ae8d9a15e915f7e0a0d5a3862a 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 3.9E-43 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VS_II0910 317e24ae8d9a15e915f7e0a0d5a3862a 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.576 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VS_II0910 317e24ae8d9a15e915f7e0a0d5a3862a 156 SUPERFAMILY SSF81573 63 121 1.57E-8 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VS_II0910 317e24ae8d9a15e915f7e0a0d5a3862a 156 Gene3D G3DSA:1.20.5.620 62 122 1.8E-10 T 14-10-2018 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 Pfam PF14489 QueF-like protein 194 270 1.2E-26 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 PIRSF PIRSF004750 6 281 9.5E-129 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 4.7E-127 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 160.695 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 Gene3D G3DSA:3.30.1130.10 143 281 2.9E-62 T 14-10-2018 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.6E-48 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 Gene3D G3DSA:3.30.1130.10 21 138 1.3E-45 T 14-10-2018 VS_2390 c2fd97915a5b8c0ad0dae34c7f0a10d7 281 SUPERFAMILY SSF55620 184 267 1.93E-9 T 14-10-2018 VS_II1390 73b52924276469bfaddfd0a5995f3912 328 Gene3D G3DSA:1.10.3720.10 67 323 9.3E-64 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1390 73b52924276469bfaddfd0a5995f3912 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 311 3.0E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II1390 73b52924276469bfaddfd0a5995f3912 328 SUPERFAMILY SSF161098 71 314 6.28E-54 T 14-10-2018 IPR035906 MetI-like superfamily VS_1592 f55351e4442f6d9cd96e31c1e8a02f2f 177 Gene3D G3DSA:3.40.630.30 12 169 3.6E-28 T 14-10-2018 VS_1592 f55351e4442f6d9cd96e31c1e8a02f2f 177 SUPERFAMILY SSF55729 20 162 1.92E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1592 f55351e4442f6d9cd96e31c1e8a02f2f 177 Pfam PF00583 Acetyltransferase (GNAT) family 66 157 3.0E-8 T 14-10-2018 IPR000182 GNAT domain VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 PIRSF PIRSF002599 1 69 1.3E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 SUPERFAMILY SSF50249 3 68 2.57E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 Gene3D G3DSA:2.40.50.140 4 67 1.2E-27 T 14-10-2018 VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 SMART SM00357 6 69 5.6E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_II0495 8d21945ddc7fbe28091a572fae3a1ef0 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 3.2E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 SUPERFAMILY SSF51735 4 174 3.67E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1306 df546bc62b75d4369e840b1262d85a3f 482 SMART SM01350 179 469 1.7E-214 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 Gene3D G3DSA:3.40.50.720 1 180 1.7E-56 T 14-10-2018 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 5.0E-234 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 Gene3D G3DSA:1.20.5.320 435 482 9.4E-25 T 14-10-2018 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 2.9E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 PIRSF PIRSF000109 1 477 1.2E-241 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 SUPERFAMILY SSF48179 177 472 1.08E-126 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 6.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 6.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 6.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 6.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 6.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 6.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 Gene3D G3DSA:1.10.1040.10 181 434 2.3E-102 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VS_1306 df546bc62b75d4369e840b1262d85a3f 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 3.2E-126 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VS_2198 0b7ac1f63af8fbe0c89891d272dba21d 201 SUPERFAMILY SSF144091 25 193 1.09E-26 T 14-10-2018 VS_2198 0b7ac1f63af8fbe0c89891d272dba21d 201 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 43 189 2.4E-49 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria VS_2198 0b7ac1f63af8fbe0c89891d272dba21d 201 Pfam PF01694 Rhomboid family 53 191 1.1E-12 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VS_2198 0b7ac1f63af8fbe0c89891d272dba21d 201 Gene3D G3DSA:1.20.1540.10 15 200 2.5E-18 T 14-10-2018 IPR035952 Rhomboid-like superfamily VS_2983 eb55f79513e85e338f8edfe05c72b336 130 Gene3D G3DSA:3.30.420.470 3 125 1.9E-11 T 14-10-2018 VS_2983 eb55f79513e85e338f8edfe05c72b336 130 Pfam PF13358 DDE superfamily endonuclease 9 82 7.5E-16 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VS_1036 a8e88dab322deb9be025258c523f676e 400 SUPERFAMILY SSF52151 24 272 2.49E-30 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_1036 a8e88dab322deb9be025258c523f676e 400 Gene3D G3DSA:3.40.1090.10 22 101 1.7E-7 T 14-10-2018 VS_1036 a8e88dab322deb9be025258c523f676e 400 Pfam PF01734 Patatin-like phospholipase 28 197 1.5E-13 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VS_0906 bf58842041188365237c213e958ad64e 191 Pfam PF05036 Sporulation related domain 115 183 2.1E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VS_0906 bf58842041188365237c213e958ad64e 191 SUPERFAMILY SSF110997 114 187 4.58E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_0906 bf58842041188365237c213e958ad64e 191 Gene3D G3DSA:3.30.70.1070 108 184 6.1E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_II1127 3fee3911d9c603cd9256f0228b299352 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 173 1.4E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_II1127 3fee3911d9c603cd9256f0228b299352 707 Pfam PF00593 TonB dependent receptor 260 706 2.6E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_II1127 3fee3911d9c603cd9256f0228b299352 707 Gene3D G3DSA:2.170.130.10 60 181 4.8E-28 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_II1127 3fee3911d9c603cd9256f0228b299352 707 Gene3D G3DSA:2.40.170.20 187 707 1.5E-112 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_II1127 3fee3911d9c603cd9256f0228b299352 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 707 5.2E-139 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VS_II1127 3fee3911d9c603cd9256f0228b299352 707 SUPERFAMILY SSF56935 36 707 4.33E-121 T 14-10-2018 VS_II1127 3fee3911d9c603cd9256f0228b299352 707 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 52 - T 14-10-2018 IPR010916 TonB box, conserved site VS_II0640 42970d12c666ea3f013033470fa2592c 551 Pfam PF12592 Protein of unknown function (DUF3763) 481 533 2.0E-18 T 14-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 VS_II0640 42970d12c666ea3f013033470fa2592c 551 SMART SM00382 45 162 1.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0640 42970d12c666ea3f013033470fa2592c 551 Gene3D G3DSA:3.40.50.300 7 227 1.1E-58 T 14-10-2018 VS_II0640 42970d12c666ea3f013033470fa2592c 551 SUPERFAMILY SSF52540 17 278 7.45E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0640 42970d12c666ea3f013033470fa2592c 551 Pfam PF07728 AAA domain (dynein-related subfamily) 48 178 1.4E-22 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VS_II0640 42970d12c666ea3f013033470fa2592c 551 Gene3D G3DSA:1.10.8.300 228 299 1.3E-23 T 14-10-2018 VS_II0355 59e70d019709ac27d0175892dc013ba4 364 Pfam PF13407 Periplasmic binding protein domain 69 322 7.5E-13 T 14-10-2018 IPR025997 Periplasmic binding protein VS_II0355 59e70d019709ac27d0175892dc013ba4 364 Gene3D G3DSA:3.40.50.2300 33 362 6.6E-138 T 14-10-2018 VS_II0355 59e70d019709ac27d0175892dc013ba4 364 Gene3D G3DSA:3.40.50.2300 180 358 6.6E-138 T 14-10-2018 VS_II0355 59e70d019709ac27d0175892dc013ba4 364 SUPERFAMILY SSF53822 27 363 9.72E-73 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_0406 8769a064d1eb145767a2874bef9653ce 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 1.7E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VS_0406 8769a064d1eb145767a2874bef9653ce 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.573 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VS_0406 8769a064d1eb145767a2874bef9653ce 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 1.9E-83 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VS_1830 a8ca5ae29575f23c5df8d35b7d92905d 306 Pfam PF08668 HDOD domain 39 234 3.0E-34 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VS_1830 a8ca5ae29575f23c5df8d35b7d92905d 306 SUPERFAMILY SSF109604 33 301 1.35E-38 T 14-10-2018 VS_1830 a8ca5ae29575f23c5df8d35b7d92905d 306 Gene3D G3DSA:1.10.3210.10 21 293 2.9E-35 T 14-10-2018 VS_0435 5e6c06380d091f4b4f9c69c25058f9c3 164 SUPERFAMILY SSF101738 4 117 2.09E-48 T 14-10-2018 IPR036760 SspB-like superfamily VS_0435 5e6c06380d091f4b4f9c69c25058f9c3 164 Pfam PF04386 Stringent starvation protein B 9 164 6.3E-41 T 14-10-2018 IPR007481 Stringent starvation protein B VS_0435 5e6c06380d091f4b4f9c69c25058f9c3 164 Gene3D G3DSA:2.30.30.220 3 128 1.0E-51 T 14-10-2018 IPR036760 SspB-like superfamily VS_0435 5e6c06380d091f4b4f9c69c25058f9c3 164 PIRSF PIRSF005276 3 164 2.7E-60 T 14-10-2018 IPR007481 Stringent starvation protein B VS_II0070 9e1f38f3c8cf4cd8edf4ad0594bf34ee 207 Gene3D G3DSA:1.10.150.240 22 87 1.0E-36 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_II0070 9e1f38f3c8cf4cd8edf4ad0594bf34ee 207 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 129 186 9.8E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0070 9e1f38f3c8cf4cd8edf4ad0594bf34ee 207 Gene3D G3DSA:3.40.50.1000 10 186 1.0E-36 T 14-10-2018 IPR023214 HAD superfamily VS_II0070 9e1f38f3c8cf4cd8edf4ad0594bf34ee 207 SUPERFAMILY SSF56784 7 197 3.12E-33 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0070 9e1f38f3c8cf4cd8edf4ad0594bf34ee 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 90 185 1.1E-9 T 14-10-2018 VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.8E-59 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 2.8E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 PRINTS PR00355 Adrenodoxin signature 42 52 2.0E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 PRINTS PR00355 Adrenodoxin signature 83 91 2.0E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 PRINTS PR00355 Adrenodoxin signature 60 74 2.0E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 Gene3D G3DSA:3.10.20.30 1 112 7.6E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_0612 cad11a9ec577cdfbc675bd50139ce0cd 112 SUPERFAMILY SSF54292 5 105 1.15E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VS_1507 76e6bc1fc0a9695ebb5963a3088a9505 302 SUPERFAMILY SSF53067 1 299 8.78E-58 T 14-10-2018 VS_1507 76e6bc1fc0a9695ebb5963a3088a9505 302 Gene3D G3DSA:3.30.420.40 4 297 2.3E-99 T 14-10-2018 VS_1507 76e6bc1fc0a9695ebb5963a3088a9505 302 Pfam PF00480 ROK family 2 300 4.2E-71 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VS_1507 76e6bc1fc0a9695ebb5963a3088a9505 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VS_1507 76e6bc1fc0a9695ebb5963a3088a9505 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 63.247 T 14-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VS_1507 76e6bc1fc0a9695ebb5963a3088a9505 302 Gene3D G3DSA:3.30.420.40 119 290 2.3E-99 T 14-10-2018 VS_II0276 25828466597d78090d5760fa3fc6150e 173 Pfam PF01467 Cytidylyltransferase-like 6 152 1.3E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VS_II0276 25828466597d78090d5760fa3fc6150e 173 SUPERFAMILY SSF52374 1 172 1.91E-24 T 14-10-2018 VS_II0276 25828466597d78090d5760fa3fc6150e 173 Gene3D G3DSA:3.40.50.620 1 172 3.0E-44 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_II1273 e65413dd4fe547135efa7f16a1c2ce6f 217 Pfam PF12973 ChrR Cupin-like domain 126 211 3.2E-30 T 14-10-2018 IPR025979 ChrR-like cupin domain VS_II1273 e65413dd4fe547135efa7f16a1c2ce6f 217 Pfam PF12973 ChrR Cupin-like domain 18 108 6.5E-40 T 14-10-2018 IPR025979 ChrR-like cupin domain VS_II1273 e65413dd4fe547135efa7f16a1c2ce6f 217 Gene3D G3DSA:2.60.120.10 1 159 6.2E-62 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1273 e65413dd4fe547135efa7f16a1c2ce6f 217 SUPERFAMILY SSF51182 118 216 1.54E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II1273 e65413dd4fe547135efa7f16a1c2ce6f 217 SUPERFAMILY SSF51182 2 127 1.69E-35 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_1066 7f977a05cb8a93535857dedbd9d50495 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 250 1.0E-44 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VS_2601 390f775831977bc83bd8a1265d7ff46f 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 205 7.4E-71 T 14-10-2018 VS_2601 390f775831977bc83bd8a1265d7ff46f 208 Gene3D G3DSA:3.40.50.150 2 206 5.6E-75 T 14-10-2018 VS_2601 390f775831977bc83bd8a1265d7ff46f 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.691 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VS_2601 390f775831977bc83bd8a1265d7ff46f 208 SUPERFAMILY SSF53335 13 205 6.14E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2601 390f775831977bc83bd8a1265d7ff46f 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VS_2601 390f775831977bc83bd8a1265d7ff46f 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 4 207 3.1E-82 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VS_II1146 f24fffa20b6ea1273e500f17f2c09737 280 SUPERFAMILY SSF50182 96 169 1.47E-10 T 14-10-2018 IPR010920 LSM domain superfamily VS_II1146 f24fffa20b6ea1273e500f17f2c09737 280 Pfam PF00924 Mechanosensitive ion channel 57 181 1.6E-16 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VS_II1146 f24fffa20b6ea1273e500f17f2c09737 280 Gene3D G3DSA:2.30.30.60 112 168 5.0E-5 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VS_II0104 20443c428b33e86489acaa04b5c826b9 263 Gene3D G3DSA:3.30.460.10 11 140 4.9E-17 T 14-10-2018 VS_II0104 20443c428b33e86489acaa04b5c826b9 263 SUPERFAMILY SSF81301 13 130 7.94E-9 T 14-10-2018 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 SUPERFAMILY SSF58104 378 677 2.49E-65 T 14-10-2018 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 SMART SM00283 417 678 3.7E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 Gene3D G3DSA:3.30.450.20 180 328 1.2E-10 T 14-10-2018 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 468 644 3.3E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 SMART SM00304 347 402 9.5E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 37 324 1.6E-65 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 515 542 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 544 573 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 SUPERFAMILY SSF103190 115 211 4.71E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_0929 c10a8a6777b03fcb57a5cd45bb8c5712 678 Gene3D G3DSA:1.10.287.950 347 678 8.5E-69 T 14-10-2018 VS_1903 96aeee28677b177eb8212db2edf2c317 248 SMART SM00382 26 223 7.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1903 96aeee28677b177eb8212db2edf2c317 248 Pfam PF00005 ABC transporter 17 172 6.8E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1903 96aeee28677b177eb8212db2edf2c317 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.4E-113 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 VS_1903 96aeee28677b177eb8212db2edf2c317 248 SUPERFAMILY SSF52540 1 230 1.56E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1903 96aeee28677b177eb8212db2edf2c317 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1903 96aeee28677b177eb8212db2edf2c317 248 Gene3D G3DSA:3.40.50.300 1 248 5.7E-66 T 14-10-2018 VS_II0531 ed4ff578d30fa9f9b6e5374e6b4c2d7d 308 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 1.8E-14 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_II0531 ed4ff578d30fa9f9b6e5374e6b4c2d7d 308 Gene3D G3DSA:1.10.3720.10 67 303 4.6E-46 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0531 ed4ff578d30fa9f9b6e5374e6b4c2d7d 308 SUPERFAMILY SSF161098 72 292 6.93E-37 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0531 ed4ff578d30fa9f9b6e5374e6b4c2d7d 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 300 6.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1067 fb49a0a770bc018c2a02bc62e2160938 703 Gene3D G3DSA:3.40.50.300 509 702 5.9E-33 T 14-10-2018 VS_1067 fb49a0a770bc018c2a02bc62e2160938 703 Pfam PF13307 Helicase C-terminal domain 538 696 1.5E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VS_1067 fb49a0a770bc018c2a02bc62e2160938 703 Gene3D G3DSA:3.40.50.300 37 319 2.6E-41 T 14-10-2018 VS_1067 fb49a0a770bc018c2a02bc62e2160938 703 SUPERFAMILY SSF52540 58 677 3.84E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1067 fb49a0a770bc018c2a02bc62e2160938 703 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 45 702 36.985 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VS_1067 fb49a0a770bc018c2a02bc62e2160938 703 SMART SM00491 547 683 4.7E-28 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VS_1067 fb49a0a770bc018c2a02bc62e2160938 703 Pfam PF06733 DEAD_2 205 273 3.6E-6 T 14-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VS_2786 1e381587370ba8c624dde4eba118e92d 206 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 198 9.3E-82 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VS_2786 1e381587370ba8c624dde4eba118e92d 206 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.611 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VS_2786 1e381587370ba8c624dde4eba118e92d 206 Pfam PF01583 Adenylylsulphate kinase 31 184 3.1E-71 T 14-10-2018 VS_2786 1e381587370ba8c624dde4eba118e92d 206 Gene3D G3DSA:3.40.50.300 9 206 2.0E-79 T 14-10-2018 VS_2786 1e381587370ba8c624dde4eba118e92d 206 SUPERFAMILY SSF52540 25 202 1.66E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3000 6b31dec28863957fb07adda693095b9c 369 Gene3D G3DSA:3.40.1350.30 45 189 1.6E-140 T 14-10-2018 VS_3000 6b31dec28863957fb07adda693095b9c 369 SUPERFAMILY SSF53335 10 367 4.8E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_3000 6b31dec28863957fb07adda693095b9c 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.537 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VS_3000 6b31dec28863957fb07adda693095b9c 369 Gene3D G3DSA:3.40.50.150 13 363 1.6E-140 T 14-10-2018 VS_3000 6b31dec28863957fb07adda693095b9c 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VS_3000 6b31dec28863957fb07adda693095b9c 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 5.0E-190 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VS_3000 6b31dec28863957fb07adda693095b9c 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 3.3E-186 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VS_3000 6b31dec28863957fb07adda693095b9c 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VS_1128 28b746a61048a908f642960a4950a46b 189 SUPERFAMILY SSF101327 2 176 1.57E-30 T 14-10-2018 IPR036255 YgfB-like superfamily VS_1128 28b746a61048a908f642960a4950a46b 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 174 5.6E-43 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VS_1128 28b746a61048a908f642960a4950a46b 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 3.0E-34 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VS_1407 2904922ed1b0a832733a45a82823e401 295 SUPERFAMILY SSF51621 80 267 1.6E-31 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_1407 2904922ed1b0a832733a45a82823e401 295 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 85 265 3.1E-15 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VS_1407 2904922ed1b0a832733a45a82823e401 295 Gene3D G3DSA:3.20.20.60 33 294 4.0E-35 T 14-10-2018 VS_2847 90759974c9a42140ea0f9a836898582a 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.3E-32 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VS_2847 90759974c9a42140ea0f9a836898582a 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 56 6.6E-21 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VS_1327 a9ed205941ea90af9998f84d4f9f9d40 310 Pfam PF06996 Type VI secretion, TssG 11 291 3.7E-48 T 14-10-2018 IPR010732 Type VI secretion, TssG-like VS_2127 802f152d8488fa295930488c6cb721c6 530 Gene3D G3DSA:3.40.30.80 1 200 5.7E-62 T 14-10-2018 VS_2127 802f152d8488fa295930488c6cb721c6 530 Gene3D G3DSA:3.50.50.60 213 510 2.7E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 1.8E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 SUPERFAMILY SSF51905 206 514 8.87E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2127 802f152d8488fa295930488c6cb721c6 530 SUPERFAMILY SSF52833 104 197 4.82E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2127 802f152d8488fa295930488c6cb721c6 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 2.7E-244 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 VS_2127 802f152d8488fa295930488c6cb721c6 530 PIRSF PIRSF000238 1 523 6.7E-252 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 VS_2127 802f152d8488fa295930488c6cb721c6 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 1.5E-35 T 14-10-2018 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 1.5E-35 T 14-10-2018 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 1.5E-35 T 14-10-2018 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 1.5E-35 T 14-10-2018 VS_2127 802f152d8488fa295930488c6cb721c6 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.5E-35 T 14-10-2018 VS_2127 802f152d8488fa295930488c6cb721c6 530 Pfam PF13192 Thioredoxin domain 120 194 4.5E-11 T 14-10-2018 IPR012336 Thioredoxin-like fold VS_2127 802f152d8488fa295930488c6cb721c6 530 Gene3D G3DSA:3.50.50.60 328 451 2.7E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2127 802f152d8488fa295930488c6cb721c6 530 SUPERFAMILY SSF52833 1 101 2.91E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2127 802f152d8488fa295930488c6cb721c6 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 3.4E-42 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_1816 cb202b9d7439fe1f539693e9668ed0c6 513 SUPERFAMILY SSF109604 283 482 7.22E-33 T 14-10-2018 VS_1816 cb202b9d7439fe1f539693e9668ed0c6 513 Pfam PF13487 HD domain 366 435 4.2E-18 T 14-10-2018 VS_1816 cb202b9d7439fe1f539693e9668ed0c6 513 SMART SM00471 303 453 9.3E-9 T 14-10-2018 IPR003607 HD/PDEase domain VS_1816 cb202b9d7439fe1f539693e9668ed0c6 513 Gene3D G3DSA:1.10.3210.10 282 497 1.6E-75 T 14-10-2018 VS_1558 f8d1afdc37fbe946a4fe5d9ebbd62e68 248 Gene3D G3DSA:3.60.110.10 2 247 7.7E-39 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VS_1558 f8d1afdc37fbe946a4fe5d9ebbd62e68 248 Pfam PF00795 Carbon-nitrogen hydrolase 7 236 7.6E-19 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VS_1558 f8d1afdc37fbe946a4fe5d9ebbd62e68 248 SUPERFAMILY SSF56317 5 238 3.01E-38 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VS_II0020 5eadf1916e3100f36b70d6c73fbb4d13 234 Gene3D G3DSA:3.40.605.10 8 224 3.7E-10 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_II0020 5eadf1916e3100f36b70d6c73fbb4d13 234 SUPERFAMILY SSF53720 11 180 3.37E-10 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_1644 54a3079582ae4c4682a42e333a6b9878 383 Gene3D G3DSA:3.30.870.10 78 251 3.5E-22 T 14-10-2018 VS_1644 54a3079582ae4c4682a42e333a6b9878 383 Pfam PF13091 PLD-like domain 112 240 3.9E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VS_1644 54a3079582ae4c4682a42e333a6b9878 383 SUPERFAMILY SSF56024 107 251 4.91E-21 T 14-10-2018 VS_1158 d01d649a8a3e69e97e7d72e5f9d8ee67 421 SUPERFAMILY SSF56935 50 420 1.06E-32 T 14-10-2018 VS_1158 d01d649a8a3e69e97e7d72e5f9d8ee67 421 Gene3D G3DSA:2.40.160.10 54 417 5.7E-5 T 14-10-2018 IPR023614 Porin domain superfamily VS_2317 d766a205113fc51e5e19249df511e42b 213 Gene3D G3DSA:3.40.50.2020 6 213 7.1E-71 T 14-10-2018 VS_2317 d766a205113fc51e5e19249df511e42b 213 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 7 213 6.3E-90 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VS_2317 d766a205113fc51e5e19249df511e42b 213 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 7 213 43.863 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VS_2317 d766a205113fc51e5e19249df511e42b 213 SUPERFAMILY SSF53271 8 211 5.38E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_2317 d766a205113fc51e5e19249df511e42b 213 Pfam PF14681 Uracil phosphoribosyltransferase 12 212 3.1E-62 T 14-10-2018 VS_1429 60703f50e6379f6f93f4852b321f508d 173 Pfam PF07977 FabA-like domain 30 159 9.3E-55 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_1429 60703f50e6379f6f93f4852b321f508d 173 SUPERFAMILY SSF54637 6 170 1.76E-53 T 14-10-2018 IPR029069 HotDog domain superfamily VS_1429 60703f50e6379f6f93f4852b321f508d 173 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 6 173 9.9E-90 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_1429 60703f50e6379f6f93f4852b321f508d 173 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 4 173 49.349 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_1429 60703f50e6379f6f93f4852b321f508d 173 Gene3D G3DSA:3.10.129.10 4 173 9.6E-63 T 14-10-2018 VS_2169 f7e711d8a5e71cc1e93109061a44fe8a 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 316 3.3E-41 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_2169 f7e711d8a5e71cc1e93109061a44fe8a 355 SUPERFAMILY SSF53686 22 335 1.44E-70 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_2169 f7e711d8a5e71cc1e93109061a44fe8a 355 Gene3D G3DSA:3.40.50.1100 24 324 8.3E-69 T 14-10-2018 VS_2169 f7e711d8a5e71cc1e93109061a44fe8a 355 Gene3D G3DSA:3.40.50.1100 51 157 8.3E-69 T 14-10-2018 VS_0849 74d36905b9b34a86e28fcf0f63034abe 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 9.4E-78 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VS_0849 74d36905b9b34a86e28fcf0f63034abe 205 SUPERFAMILY SSF52540 2 193 1.69E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0849 74d36905b9b34a86e28fcf0f63034abe 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0849 74d36905b9b34a86e28fcf0f63034abe 205 SMART SM00382 26 205 6.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0849 74d36905b9b34a86e28fcf0f63034abe 205 Gene3D G3DSA:3.40.50.300 1 196 2.8E-43 T 14-10-2018 VS_0849 74d36905b9b34a86e28fcf0f63034abe 205 Pfam PF00005 ABC transporter 18 158 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1175 93db492fd62b95c2275975833f0ce937 703 Pfam PF11412 Disulphide bond corrector protein DsbC 65 169 6.8E-15 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VS_II1175 93db492fd62b95c2275975833f0ce937 703 Gene3D G3DSA:3.40.30.10 589 702 2.7E-8 T 14-10-2018 VS_II1175 93db492fd62b95c2275975833f0ce937 703 Pfam PF13899 Thioredoxin-like 602 678 6.3E-10 T 14-10-2018 VS_II1175 93db492fd62b95c2275975833f0ce937 703 SUPERFAMILY SSF52833 586 685 8.98E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1097 a76a69e563ebb54023b56aba867ad7a4 630 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 596 9.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1097 a76a69e563ebb54023b56aba867ad7a4 630 Gene3D G3DSA:1.10.287.950 308 630 1.2E-71 T 14-10-2018 VS_1097 a76a69e563ebb54023b56aba867ad7a4 630 Pfam PF02743 Cache domain 52 256 5.1E-17 T 14-10-2018 IPR033479 Double Cache domain 1 VS_1097 a76a69e563ebb54023b56aba867ad7a4 630 Gene3D G3DSA:3.30.450.20 70 175 3.9E-8 T 14-10-2018 VS_1097 a76a69e563ebb54023b56aba867ad7a4 630 SUPERFAMILY SSF58104 343 630 2.62E-72 T 14-10-2018 VS_1097 a76a69e563ebb54023b56aba867ad7a4 630 SMART SM00283 368 629 9.0E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1202 ae78f4bdd4aa40a1467331ab932c6f95 452 Pfam PF03553 Na+/H+ antiporter family 15 222 2.3E-13 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 3.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 3.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 3.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 3.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 3.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 3.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 3.1E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 Pfam PF00209 Sodium:neurotransmitter symporter family 123 471 1.3E-75 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 4.9E-39 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_1034 0869b0de98139d356045b4266ace43be 486 SUPERFAMILY SSF161070 3 477 2.22E-146 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 SMART SM00895 82 211 2.4E-5 T 14-10-2018 IPR011711 GntR, C-terminal VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 SUPERFAMILY SSF48008 78 219 9.42E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 Gene3D G3DSA:1.20.120.530 76 223 3.1E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 SMART SM00345 14 72 1.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 SUPERFAMILY SSF46785 5 76 1.27E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 Gene3D G3DSA:1.10.10.10 4 73 5.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 Pfam PF07729 FCD domain 82 209 4.3E-17 T 14-10-2018 IPR011711 GntR, C-terminal VS_0391 d873b07be4dc1d34af4bdc69ad9c02e7 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 9.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_0606 1727cc9993f8fe8ed0c27f151d676a55 173 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VS_0606 1727cc9993f8fe8ed0c27f151d676a55 173 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.9E-65 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VS_0606 1727cc9993f8fe8ed0c27f151d676a55 173 Gene3D G3DSA:1.10.10.10 1 144 9.1E-54 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0606 1727cc9993f8fe8ed0c27f151d676a55 173 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 173 49.993 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VS_0606 1727cc9993f8fe8ed0c27f151d676a55 173 SUPERFAMILY SSF46785 2 133 8.62E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0606 1727cc9993f8fe8ed0c27f151d676a55 173 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.1E-46 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VS_0606 1727cc9993f8fe8ed0c27f151d676a55 173 Pfam PF02082 Transcriptional regulator 1 83 7.6E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VS_1641 e2524a246e748e147ab5a671c1def7fc 303 SUPERFAMILY SSF53850 91 297 3.14E-24 T 14-10-2018 VS_1641 e2524a246e748e147ab5a671c1def7fc 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1641 e2524a246e748e147ab5a671c1def7fc 303 Pfam PF03466 LysR substrate binding domain 91 296 1.5E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1641 e2524a246e748e147ab5a671c1def7fc 303 Gene3D G3DSA:3.40.190.10 165 269 1.5E-24 T 14-10-2018 VS_1641 e2524a246e748e147ab5a671c1def7fc 303 Gene3D G3DSA:3.40.190.10 91 290 1.5E-24 T 14-10-2018 VS_1641 e2524a246e748e147ab5a671c1def7fc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1641 e2524a246e748e147ab5a671c1def7fc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1641 e2524a246e748e147ab5a671c1def7fc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1641 e2524a246e748e147ab5a671c1def7fc 303 SUPERFAMILY SSF46785 1 108 5.57E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1641 e2524a246e748e147ab5a671c1def7fc 303 Gene3D G3DSA:1.10.10.10 1 83 2.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0404 1e446a60004948d18ffdfbf1c40fded3 119 SMART SM00905 6 116 2.1E-46 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VS_0404 1e446a60004948d18ffdfbf1c40fded3 119 Gene3D G3DSA:3.30.1130.10 1 118 1.8E-44 T 14-10-2018 VS_0404 1e446a60004948d18ffdfbf1c40fded3 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 2.5E-28 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VS_0404 1e446a60004948d18ffdfbf1c40fded3 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 8.6E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VS_0404 1e446a60004948d18ffdfbf1c40fded3 119 SUPERFAMILY SSF55620 3 117 1.17E-35 T 14-10-2018 VS_0404 1e446a60004948d18ffdfbf1c40fded3 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 4.1E-35 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VS_0138 3862f8e0956a951935af01fe17907ad7 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 5.7E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0138 3862f8e0956a951935af01fe17907ad7 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0138 3862f8e0956a951935af01fe17907ad7 147 Gene3D G3DSA:3.30.700.10 33 141 4.5E-43 T 14-10-2018 VS_0138 3862f8e0956a951935af01fe17907ad7 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VS_0138 3862f8e0956a951935af01fe17907ad7 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VS_0138 3862f8e0956a951935af01fe17907ad7 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 3.4E-56 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VS_0138 3862f8e0956a951935af01fe17907ad7 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 6.1E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0138 3862f8e0956a951935af01fe17907ad7 147 SUPERFAMILY SSF54523 36 142 2.25E-37 T 14-10-2018 VS_0138 3862f8e0956a951935af01fe17907ad7 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.2E-41 T 14-10-2018 IPR013545 Type II secretion system protein G VS_II1449 332ada85cb280165adfd8ad353e8b5da 229 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 226 1.8E-54 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative VS_II1449 332ada85cb280165adfd8ad353e8b5da 229 Gene3D G3DSA:2.60.120.10 122 209 4.3E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1449 332ada85cb280165adfd8ad353e8b5da 229 Gene3D G3DSA:1.10.10.1320 1 121 5.4E-13 T 14-10-2018 VS_II1449 332ada85cb280165adfd8ad353e8b5da 229 SUPERFAMILY SSF51182 120 206 9.9E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II1449 332ada85cb280165adfd8ad353e8b5da 229 Pfam PF12973 ChrR Cupin-like domain 127 204 4.1E-17 T 14-10-2018 IPR025979 ChrR-like cupin domain VS_0085 f79102826644a2ae15f9f812076b1573 154 Gene3D G3DSA:1.10.10.10 4 58 7.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0085 f79102826644a2ae15f9f812076b1573 154 SUPERFAMILY SSF54909 69 154 6.3E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_0085 f79102826644a2ae15f9f812076b1573 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 2.5E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_0085 f79102826644a2ae15f9f812076b1573 154 SUPERFAMILY SSF46785 7 68 5.88E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0085 f79102826644a2ae15f9f812076b1573 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 3.0E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_0085 f79102826644a2ae15f9f812076b1573 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 3.0E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_0085 f79102826644a2ae15f9f812076b1573 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 3.0E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_0085 f79102826644a2ae15f9f812076b1573 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.5E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_0085 f79102826644a2ae15f9f812076b1573 154 Gene3D G3DSA:3.30.70.920 60 142 2.6E-31 T 14-10-2018 VS_0085 f79102826644a2ae15f9f812076b1573 154 SMART SM00344 8 115 2.9E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_2364 acfca73c1fe068e4ff667703867b267a 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.508 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VS_2364 acfca73c1fe068e4ff667703867b267a 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 9.7E-49 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VS_II1154 2231edb27a36a51c7394bfe136f7811f 543 Gene3D G3DSA:3.50.50.60 473 533 4.2E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1154 2231edb27a36a51c7394bfe136f7811f 543 Gene3D G3DSA:3.50.50.60 85 305 7.7E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1154 2231edb27a36a51c7394bfe136f7811f 543 SUPERFAMILY SSF51905 100 528 9.47E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1154 2231edb27a36a51c7394bfe136f7811f 543 Gene3D G3DSA:3.30.70.2700 1 80 1.0E-28 T 14-10-2018 VS_II1154 2231edb27a36a51c7394bfe136f7811f 543 PIRSF PIRSF038984 1 535 3.2E-237 T 14-10-2018 IPR028348 FAD dependent protein VS_1639 bff02e374fa9dd2e3bc9f0d55f2f7a13 515 Pfam PF00884 Sulfatase 26 351 1.7E-58 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VS_1639 bff02e374fa9dd2e3bc9f0d55f2f7a13 515 Gene3D G3DSA:3.40.720.10 26 392 8.3E-99 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_1639 bff02e374fa9dd2e3bc9f0d55f2f7a13 515 SUPERFAMILY SSF53649 22 467 1.25E-115 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_1639 bff02e374fa9dd2e3bc9f0d55f2f7a13 515 Gene3D G3DSA:3.30.1120.10 393 426 8.3E-99 T 14-10-2018 VS_II1495 aa59609ee213937f07aca2a070835243 660 Gene3D G3DSA:2.130.10.10 266 625 2.3E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 484 8.6E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 SUPERFAMILY SSF55785 20 114 2.97E-25 T 14-10-2018 IPR035965 PAS domain superfamily VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 112 4.7E-12 T 14-10-2018 IPR000014 PAS domain VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 Gene3D G3DSA:1.10.287.950 230 520 6.8E-56 T 14-10-2018 VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 SMART SM00283 257 518 3.7E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 SUPERFAMILY SSF58104 241 518 4.05E-59 T 14-10-2018 VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 Gene3D G3DSA:3.30.450.20 2 117 1.2E-23 T 14-10-2018 VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 SMART SM00091 8 75 0.0036 T 14-10-2018 IPR000014 PAS domain VS_II1056 ce13d45dd23092b76923ff43f70b52fc 520 Pfam PF08447 PAS fold 31 114 2.8E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VS_1804 d652d67ba9e01c8fb46df3caf272974f 453 Gene3D G3DSA:3.30.1330.90 10 159 1.3E-48 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VS_1804 d652d67ba9e01c8fb46df3caf272974f 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 9.7E-97 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VS_1804 d652d67ba9e01c8fb46df3caf272974f 453 SUPERFAMILY SSF143548 16 157 2.88E-43 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VS_1804 d652d67ba9e01c8fb46df3caf272974f 453 Pfam PF03315 Serine dehydratase beta chain 3 155 1.9E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VS_1804 d652d67ba9e01c8fb46df3caf272974f 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 5.9E-225 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VS_1168 27cd321dfd7804498856f74ac5bfe44b 110 SUPERFAMILY SSF89957 10 89 1.44E-20 T 14-10-2018 IPR029756 MTH1187/YkoF-like VS_1168 27cd321dfd7804498856f74ac5bfe44b 110 Gene3D G3DSA:3.30.70.930 5 107 6.5E-30 T 14-10-2018 IPR029756 MTH1187/YkoF-like VS_1168 27cd321dfd7804498856f74ac5bfe44b 110 Pfam PF01910 Thiamine-binding protein 12 90 2.6E-22 T 14-10-2018 IPR002767 Thiamine-binding protein VS_II1325 6dd72ea714e086c7d2b327909601c5c1 236 Gene3D G3DSA:3.40.630.10 1 234 2.5E-59 T 14-10-2018 VS_II1325 6dd72ea714e086c7d2b327909601c5c1 236 Pfam PF00246 Zinc carboxypeptidase 37 157 1.6E-11 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VS_II1325 6dd72ea714e086c7d2b327909601c5c1 236 SUPERFAMILY SSF53187 15 214 2.58E-29 T 14-10-2018 VS_II0338 38f82fd97f9cef2f4dab54f84f902b9a 421 Pfam PF13520 Amino acid permease 11 394 6.9E-29 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VS_II0338 38f82fd97f9cef2f4dab54f84f902b9a 421 Gene3D G3DSA:1.20.1740.10 2 415 6.8E-59 T 14-10-2018 VS_II0338 38f82fd97f9cef2f4dab54f84f902b9a 421 PIRSF PIRSF006060 1 418 5.8E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VS_1103 defeb3bb8bf36eaa81adac715029075c 301 SUPERFAMILY SSF117396 11 272 2.49E-71 T 14-10-2018 IPR036520 UPF0759 superfamily VS_1103 defeb3bb8bf36eaa81adac715029075c 301 Pfam PF01904 Protein of unknown function DUF72 30 268 7.7E-55 T 14-10-2018 IPR002763 Protein of unknown function DUF72 VS_1103 defeb3bb8bf36eaa81adac715029075c 301 Gene3D G3DSA:3.20.20.410 4 275 1.9E-42 T 14-10-2018 IPR036520 UPF0759 superfamily VS_0289 6a35698a425173213d13d1da7c070223 153 SUPERFAMILY SSF103039 1 153 2.49E-38 T 14-10-2018 IPR028976 CheC-like superfamily VS_0289 6a35698a425173213d13d1da7c070223 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 8.4E-22 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VS_0289 6a35698a425173213d13d1da7c070223 153 Gene3D G3DSA:3.40.1550.10 1 153 1.1E-45 T 14-10-2018 IPR028976 CheC-like superfamily VS_0111 bdb2a3ea4c76f9a11ca036abe4c93d2f 269 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 61 244 1.2E-72 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VS_0111 bdb2a3ea4c76f9a11ca036abe4c93d2f 269 Pfam PF01926 50S ribosome-binding GTPase 79 197 1.4E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0111 bdb2a3ea4c76f9a11ca036abe4c93d2f 269 Gene3D G3DSA:3.40.50.300 52 252 4.0E-57 T 14-10-2018 VS_0111 bdb2a3ea4c76f9a11ca036abe4c93d2f 269 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 65 248 27.471 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VS_0111 bdb2a3ea4c76f9a11ca036abe4c93d2f 269 SUPERFAMILY SSF52540 56 247 7.65E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 3.2E-110 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 PIRSF PIRSF004692 1 323 7.7E-130 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 Pfam PF01380 SIS domain 41 172 1.8E-31 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 Gene3D G3DSA:3.40.50.10490 6 195 1.0E-64 T 14-10-2018 VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 SUPERFAMILY SSF53697 10 318 4.23E-65 T 14-10-2018 VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 Gene3D G3DSA:3.10.580.10 196 320 2.7E-43 T 14-10-2018 VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 SMART SM00116 275 322 2.1 T 14-10-2018 IPR000644 CBS domain VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 SMART SM00116 210 258 0.12 T 14-10-2018 IPR000644 CBS domain VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 Pfam PF00571 CBS domain 203 258 7.2E-5 T 14-10-2018 IPR000644 CBS domain VS_2752 fa2ca7bdd3a74f677af9b14d7b5ecd73 323 Pfam PF00571 CBS domain 268 320 3.3E-4 T 14-10-2018 IPR000644 CBS domain VS_1704 cdfc6231e7aa71c86a4ddcac8d0f2619 231 Gene3D G3DSA:3.40.50.720 2 229 1.2E-51 T 14-10-2018 VS_1704 cdfc6231e7aa71c86a4ddcac8d0f2619 231 SUPERFAMILY SSF51735 7 220 3.78E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1704 cdfc6231e7aa71c86a4ddcac8d0f2619 231 Pfam PF08732 HIM1 77 171 2.0E-10 T 14-10-2018 IPR014843 Protein Him1/Fmp52 VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 Gene3D G3DSA:3.40.50.300 267 495 3.2E-45 T 14-10-2018 VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 Pfam PF00005 ABC transporter 21 170 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 Pfam PF00005 ABC transporter 270 423 1.1E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 Gene3D G3DSA:3.40.50.300 1 239 1.2E-57 T 14-10-2018 VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 SUPERFAMILY SSF52540 5 228 7.25E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 SUPERFAMILY SSF52540 269 481 1.7E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 SMART SM00382 278 472 5.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0941 1e7c846f6564e2d4db98266dfe3d37ad 501 SMART SM00382 30 225 6.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.3E-136 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 Gene3D G3DSA:3.30.590.10 105 457 7.3E-147 T 14-10-2018 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 SMART SM01230 102 379 1.4E-150 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.0E-207 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 Gene3D G3DSA:3.10.20.70 2 104 4.4E-40 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 SUPERFAMILY SSF55931 102 468 4.12E-136 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 SUPERFAMILY SSF54368 3 100 1.07E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 5.6E-30 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VS_0121 cf34e9fd17717447c1d7dce3e19e2d9a 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VS_1503 5054314e421d854693a0e720f2a643b4 605 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 13 145 8.4E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VS_1503 5054314e421d854693a0e720f2a643b4 605 SUPERFAMILY SSF53218 377 522 2.88E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_1503 5054314e421d854693a0e720f2a643b4 605 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 375 512 1.1E-31 T 14-10-2018 IPR001453 MoaB/Mog domain VS_1503 5054314e421d854693a0e720f2a643b4 605 Gene3D G3DSA:3.40.980.10 374 525 1.9E-134 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_1503 5054314e421d854693a0e720f2a643b4 605 PIRSF PIRSF036618 1 605 0.0 T 14-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VS_1503 5054314e421d854693a0e720f2a643b4 605 Gene3D G3DSA:2.20.25.120 56 88 6.6E-57 T 14-10-2018 VS_1503 5054314e421d854693a0e720f2a643b4 605 SMART SM00852 379 516 2.2E-38 T 14-10-2018 IPR001453 MoaB/Mog domain VS_1503 5054314e421d854693a0e720f2a643b4 605 SUPERFAMILY SSF63867 526 603 1.7E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_1503 5054314e421d854693a0e720f2a643b4 605 Pfam PF03454 MoeA C-terminal region (domain IV) 530 601 1.3E-19 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_1503 5054314e421d854693a0e720f2a643b4 605 Pfam PF00994 Probable molybdopterin binding domain 379 515 4.5E-26 T 14-10-2018 IPR001453 MoaB/Mog domain VS_1503 5054314e421d854693a0e720f2a643b4 605 SUPERFAMILY SSF52540 11 171 1.21E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1503 5054314e421d854693a0e720f2a643b4 605 SUPERFAMILY SSF63882 207 375 3.53E-47 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_1503 5054314e421d854693a0e720f2a643b4 605 Gene3D G3DSA:3.90.105.10 225 373 1.9E-134 T 14-10-2018 VS_1503 5054314e421d854693a0e720f2a643b4 605 Pfam PF03453 MoeA N-terminal region (domain I and II) 208 366 3.4E-40 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_1503 5054314e421d854693a0e720f2a643b4 605 Gene3D G3DSA:2.170.190.11 249 340 1.9E-134 T 14-10-2018 VS_1503 5054314e421d854693a0e720f2a643b4 605 Gene3D G3DSA:3.40.50.300 13 167 6.6E-57 T 14-10-2018 VS_1503 5054314e421d854693a0e720f2a643b4 605 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 13 168 7.8E-44 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VS_1503 5054314e421d854693a0e720f2a643b4 605 Gene3D G3DSA:2.40.340.10 526 596 1.9E-134 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VS_1276 39e361be92693a686508571b496dd819 157 Gene3D G3DSA:3.40.50.2300 1 138 2.3E-18 T 14-10-2018 VS_1276 39e361be92693a686508571b496dd819 157 SUPERFAMILY SSF52172 2 130 9.11E-20 T 14-10-2018 IPR011006 CheY-like superfamily VS_1276 39e361be92693a686508571b496dd819 157 SMART SM00448 4 125 1.6E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1276 39e361be92693a686508571b496dd819 157 Pfam PF00072 Response regulator receiver domain 7 125 7.8E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 137 3.0E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 446 42.874 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 SMART SM00382 49 335 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 SMART SM01086 338 437 5.4E-21 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 446 2.3E-219 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 338 407 1.3E-4 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 Pfam PF07724 AAA domain (Cdc48 subfamily) 180 332 3.1E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 Gene3D G3DSA:1.10.8.60 338 443 3.5E-39 T 14-10-2018 VS_2902 94269208aa0372dd9c9d1bbf32ac3d53 446 SUPERFAMILY SSF52540 3 444 7.2E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0888 28cc61b8fc093c82f4a54f0d65ed694c 604 Gene3D G3DSA:3.40.50.720 398 511 2.9E-6 T 14-10-2018 VS_0888 28cc61b8fc093c82f4a54f0d65ed694c 604 Gene3D G3DSA:1.20.1530.20 4 397 7.4E-18 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VS_0888 28cc61b8fc093c82f4a54f0d65ed694c 604 Pfam PF00999 Sodium/hydrogen exchanger family 11 388 2.9E-33 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 Gene3D G3DSA:3.40.50.300 243 488 2.8E-53 T 14-10-2018 VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 SMART SM00490 287 368 1.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 29 582 41.864 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 Gene3D G3DSA:3.40.50.300 24 239 3.3E-73 T 14-10-2018 VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 Gene3D G3DSA:3.30.70.330 506 575 2.0E-9 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 Pfam PF03880 DbpA RNA binding domain 505 571 6.1E-15 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 Pfam PF00271 Helicase conserved C-terminal domain 260 368 7.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 182 190 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 Pfam PF00270 DEAD/DEAH box helicase 58 224 4.8E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 SMART SM00487 53 251 1.7E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_II1137 ae3098c8461bcdad14d26e90dbce8e91 689 SUPERFAMILY SSF52540 102 389 1.84E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2465 63e1a31288278a4691db7ae7eba6c975 282 SUPERFAMILY SSF51556 22 280 5.19E-73 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_2465 63e1a31288278a4691db7ae7eba6c975 282 Gene3D G3DSA:3.20.20.140 20 281 8.9E-81 T 14-10-2018 VS_2465 63e1a31288278a4691db7ae7eba6c975 282 Pfam PF01026 TatD related DNase 23 278 5.4E-65 T 14-10-2018 IPR001130 TatD family GO:0016788 VS_2465 63e1a31288278a4691db7ae7eba6c975 282 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 215 231 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VS_2465 63e1a31288278a4691db7ae7eba6c975 282 PIRSF PIRSF005902 3 282 1.3E-68 T 14-10-2018 IPR001130 TatD family GO:0016788 VS_II1285 2ed6c480e06f6b059c5c6503513150fd 256 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 9 250 1.7E-95 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 VS_II1285 2ed6c480e06f6b059c5c6503513150fd 256 SUPERFAMILY SSF52540 9 242 2.59E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1285 2ed6c480e06f6b059c5c6503513150fd 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1285 2ed6c480e06f6b059c5c6503513150fd 256 SMART SM00382 34 253 4.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1285 2ed6c480e06f6b059c5c6503513150fd 256 Gene3D G3DSA:3.40.50.300 8 248 3.9E-67 T 14-10-2018 VS_II1285 2ed6c480e06f6b059c5c6503513150fd 256 Pfam PF00005 ABC transporter 25 181 5.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2192 5915084abb7f63faf567176ecb68cab9 440 Hamap MF_01935 Isochorismate synthase MenF [menF]. 8 432 31.161 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VS_2192 5915084abb7f63faf567176ecb68cab9 440 SUPERFAMILY SSF56322 29 430 4.19E-103 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VS_2192 5915084abb7f63faf567176ecb68cab9 440 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 429 6.3E-105 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VS_2192 5915084abb7f63faf567176ecb68cab9 440 Pfam PF00425 chorismate binding enzyme 169 422 7.5E-74 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VS_2192 5915084abb7f63faf567176ecb68cab9 440 Gene3D G3DSA:3.60.120.10 5 435 2.4E-130 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 SUPERFAMILY SSF116726 148 226 2.62E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Gene3D G3DSA:3.40.50.720 2 139 9.2E-51 T 14-10-2018 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Gene3D G3DSA:3.40.50.720 233 366 5.0E-37 T 14-10-2018 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 SUPERFAMILY SSF51735 1 151 4.37E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 SUPERFAMILY SSF116726 375 437 4.32E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Pfam PF02080 TrkA-C domain 391 450 2.9E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 8.8E-32 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 8.8E-32 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 8.8E-32 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.8E-32 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.8E-32 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Pfam PF02254 TrkA-N domain 3 115 1.1E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Pfam PF02254 TrkA-N domain 235 350 3.6E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Gene3D G3DSA:3.30.70.1450 367 458 3.5E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 SUPERFAMILY SSF51735 232 376 2.35E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_3129 cf582b368eacb9d2ab0d0eabd77836e7 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VS_1671 c45d21aea52a840275c7d4a4a297f0b0 226 PIRSF PIRSF028063 5 225 1.7E-125 T 14-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VS_1671 c45d21aea52a840275c7d4a4a297f0b0 226 Pfam PF10881 Protein of unknown function (DUF2726) 42 164 4.0E-39 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 VS_II0671 383cfa09da03745656b8507987e4b216 258 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 95 128 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_II0671 383cfa09da03745656b8507987e4b216 258 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 15 248 1.9E-94 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_II0671 383cfa09da03745656b8507987e4b216 258 Gene3D G3DSA:3.30.950.10 131 257 1.1E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VS_II0671 383cfa09da03745656b8507987e4b216 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 20 34 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VS_II0671 383cfa09da03745656b8507987e4b216 258 SUPERFAMILY SSF53790 11 255 3.4E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VS_II0671 383cfa09da03745656b8507987e4b216 258 Gene3D G3DSA:3.40.1010.10 13 130 5.9E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VS_II0671 383cfa09da03745656b8507987e4b216 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 18 227 2.8E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VS_1153 75ab360925b90f444313f40a6ba66780 257 Gene3D G3DSA:3.40.190.10 26 247 3.9E-71 T 14-10-2018 VS_1153 75ab360925b90f444313f40a6ba66780 257 SUPERFAMILY SSF53850 1 252 2.41E-61 T 14-10-2018 VS_1153 75ab360925b90f444313f40a6ba66780 257 Gene3D G3DSA:3.40.190.10 109 208 3.9E-71 T 14-10-2018 VS_1153 75ab360925b90f444313f40a6ba66780 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VS_1153 75ab360925b90f444313f40a6ba66780 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 249 1.0E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_1153 75ab360925b90f444313f40a6ba66780 257 SMART SM00062 23 251 1.6E-59 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II1092 9bc00462ce2f858260e14bad6d035846 305 Pfam PF00892 EamA-like transporter family 164 295 2.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1092 9bc00462ce2f858260e14bad6d035846 305 Pfam PF00892 EamA-like transporter family 13 147 7.8E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1092 9bc00462ce2f858260e14bad6d035846 305 SUPERFAMILY SSF103481 201 300 2.35E-11 T 14-10-2018 VS_II0136 12933309e7aeee6340497c22bcc372a4 289 Pfam PF01261 Xylose isomerase-like TIM barrel 30 238 1.3E-33 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VS_II0136 12933309e7aeee6340497c22bcc372a4 289 Gene3D G3DSA:3.20.20.150 2 287 4.3E-73 T 14-10-2018 VS_II0136 12933309e7aeee6340497c22bcc372a4 289 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 6 284 2.2E-102 T 14-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 VS_II0136 12933309e7aeee6340497c22bcc372a4 289 SUPERFAMILY SSF51658 11 283 1.09E-50 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VS_2311 304c62feae5fa87a82f57ba798d0594a 484 Pfam PF14559 Tetratricopeptide repeat 352 417 8.7E-10 T 14-10-2018 VS_2311 304c62feae5fa87a82f57ba798d0594a 484 SUPERFAMILY SSF48452 311 455 1.3E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2311 304c62feae5fa87a82f57ba798d0594a 484 Gene3D G3DSA:1.25.40.10 256 472 7.3E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2311 304c62feae5fa87a82f57ba798d0594a 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 483 40.063 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VS_2311 304c62feae5fa87a82f57ba798d0594a 484 Gene3D G3DSA:3.30.2010.10 70 148 6.1E-7 T 14-10-2018 VS_2311 304c62feae5fa87a82f57ba798d0594a 484 Pfam PF01435 Peptidase family M48 70 252 1.5E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VS_2355 09429c09408276addad9d1a61dd003d1 873 Pfam PF01842 ACT domain 802 849 2.1E-6 T 14-10-2018 IPR002912 ACT domain VS_2355 09429c09408276addad9d1a61dd003d1 873 SUPERFAMILY SSF81593 189 310 1.49E-9 T 14-10-2018 VS_2355 09429c09408276addad9d1a61dd003d1 873 Pfam PF01909 Nucleotidyltransferase domain 66 101 1.9E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VS_2355 09429c09408276addad9d1a61dd003d1 873 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 873 336.837 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VS_2355 09429c09408276addad9d1a61dd003d1 873 SUPERFAMILY SSF55021 796 861 9.92E-10 T 14-10-2018 VS_2355 09429c09408276addad9d1a61dd003d1 873 SUPERFAMILY SSF55021 689 749 3.05E-7 T 14-10-2018 VS_2355 09429c09408276addad9d1a61dd003d1 873 Gene3D G3DSA:1.10.3210.10 438 585 4.4E-10 T 14-10-2018 VS_2355 09429c09408276addad9d1a61dd003d1 873 SUPERFAMILY SSF81301 35 169 5.73E-18 T 14-10-2018 VS_2355 09429c09408276addad9d1a61dd003d1 873 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 868 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VS_2355 09429c09408276addad9d1a61dd003d1 873 PIRSF PIRSF006288 8 873 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VS_2355 09429c09408276addad9d1a61dd003d1 873 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 7.4E-36 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VS_2355 09429c09408276addad9d1a61dd003d1 873 SUPERFAMILY SSF109604 418 562 4.24E-15 T 14-10-2018 VS_2355 09429c09408276addad9d1a61dd003d1 873 SMART SM00471 447 594 4.0E-10 T 14-10-2018 IPR003607 HD/PDEase domain VS_2355 09429c09408276addad9d1a61dd003d1 873 Pfam PF01966 HD domain 451 584 2.5E-13 T 14-10-2018 IPR006674 HD domain VS_0142 85eddab210d87c53d3484d957821327d 349 Gene3D G3DSA:1.10.40.60 113 228 1.7E-87 T 14-10-2018 IPR038072 GspK, central domain superfamily VS_0142 85eddab210d87c53d3484d957821327d 349 PIRSF PIRSF002786 15 341 2.9E-64 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VS_0142 85eddab210d87c53d3484d957821327d 349 SUPERFAMILY SSF54523 50 338 5.02E-36 T 14-10-2018 VS_0142 85eddab210d87c53d3484d957821327d 349 SUPERFAMILY SSF158544 115 226 6.02E-30 T 14-10-2018 IPR038072 GspK, central domain superfamily VS_0142 85eddab210d87c53d3484d957821327d 349 Pfam PF03934 Type II secretion system (T2SS), protein K 44 331 6.3E-86 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VS_0142 85eddab210d87c53d3484d957821327d 349 Gene3D G3DSA:1.10.40.60 229 298 1.7E-87 T 14-10-2018 IPR038072 GspK, central domain superfamily VS_0142 85eddab210d87c53d3484d957821327d 349 SUPERFAMILY SSF158544 229 297 2.43E-19 T 14-10-2018 IPR038072 GspK, central domain superfamily VS_0142 85eddab210d87c53d3484d957821327d 349 Gene3D G3DSA:3.30.1300.30 56 322 1.7E-87 T 14-10-2018 VS_II1298 31a717bdd910e2428fd21209cd8924a3 686 Gene3D G3DSA:2.60.40.1180 454 539 5.9E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VS_II1298 31a717bdd910e2428fd21209cd8924a3 686 SUPERFAMILY SSF51011 458 536 4.32E-7 T 14-10-2018 VS_II1298 31a717bdd910e2428fd21209cd8924a3 686 Pfam PF00128 Alpha amylase, catalytic domain 207 392 1.9E-15 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II1298 31a717bdd910e2428fd21209cd8924a3 686 Pfam PF00128 Alpha amylase, catalytic domain 90 177 6.3E-26 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II1298 31a717bdd910e2428fd21209cd8924a3 686 SMART SM00642 64 449 7.4E-28 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II1298 31a717bdd910e2428fd21209cd8924a3 686 SUPERFAMILY SSF51445 50 459 1.88E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II1298 31a717bdd910e2428fd21209cd8924a3 686 Gene3D G3DSA:3.20.20.80 52 410 4.7E-69 T 14-10-2018 VS_2968 42b90977fdd122b444f1704278d7207b 162 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 56 91 6.0E-14 T 14-10-2018 VS_2968 42b90977fdd122b444f1704278d7207b 162 SUPERFAMILY SSF54747 23 93 6.67E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VS_2968 42b90977fdd122b444f1704278d7207b 162 Pfam PF00298 Ribosomal protein L11, RNA binding domain 92 160 1.5E-23 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VS_2968 42b90977fdd122b444f1704278d7207b 162 SMART SM00649 29 161 1.2E-82 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VS_2968 42b90977fdd122b444f1704278d7207b 162 SUPERFAMILY SSF46906 88 161 3.4E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VS_2968 42b90977fdd122b444f1704278d7207b 162 Pfam PF03946 Ribosomal protein L11, N-terminal domain 29 87 1.4E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal VS_2968 42b90977fdd122b444f1704278d7207b 162 Gene3D G3DSA:1.10.10.250 93 161 1.4E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VS_2968 42b90977fdd122b444f1704278d7207b 162 Gene3D G3DSA:3.30.1550.10 22 92 5.6E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VS_2968 42b90977fdd122b444f1704278d7207b 162 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 23 161 6.5E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2968 42b90977fdd122b444f1704278d7207b 162 ProSitePatterns PS00359 Ribosomal protein L11 signature. 147 162 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_2968 42b90977fdd122b444f1704278d7207b 162 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 25 162 30.507 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VS_3094 76ba202b3830ccd65bfd69dd09ff4ddf 254 SUPERFAMILY SSF110399 1 236 3.79E-86 T 14-10-2018 VS_3094 76ba202b3830ccd65bfd69dd09ff4ddf 254 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.352 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VS_3094 76ba202b3830ccd65bfd69dd09ff4ddf 254 Gene3D G3DSA:3.20.20.70 1 253 2.9E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_3094 76ba202b3830ccd65bfd69dd09ff4ddf 254 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.4E-110 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VS_1124 e16701827f09587e9cd3791c66e6255d 346 SUPERFAMILY SSF81345 16 340 6.8E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_1124 e16701827f09587e9cd3791c66e6255d 346 Pfam PF01032 FecCD transport family 29 340 6.2E-90 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_1124 e16701827f09587e9cd3791c66e6255d 346 Gene3D G3DSA:1.10.3470.10 18 344 3.5E-89 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_1003 addad2d240d0753a754b05f6a510213b 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_1003 addad2d240d0753a754b05f6a510213b 180 SUPERFAMILY SSF54523 8 97 2.51E-15 T 14-10-2018 VS_1003 addad2d240d0753a754b05f6a510213b 180 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 5.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_1003 addad2d240d0753a754b05f6a510213b 180 Gene3D G3DSA:3.30.700.10 8 109 1.3E-14 T 14-10-2018 VS_1184 f22019e8fdaab5faa847597e719f291b 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1184 f22019e8fdaab5faa847597e719f291b 573 Gene3D G3DSA:1.20.1560.10 1 321 1.6E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1184 f22019e8fdaab5faa847597e719f291b 573 SUPERFAMILY SSF90123 7 313 1.83E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_1184 f22019e8fdaab5faa847597e719f291b 573 SUPERFAMILY SSF52540 335 571 6.23E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1184 f22019e8fdaab5faa847597e719f291b 573 SMART SM00382 365 549 2.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1184 f22019e8fdaab5faa847597e719f291b 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 5.2E-134 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 VS_1184 f22019e8fdaab5faa847597e719f291b 573 Pfam PF00005 ABC transporter 356 502 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1184 f22019e8fdaab5faa847597e719f291b 573 Pfam PF00664 ABC transporter transmembrane region 80 286 7.5E-8 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_1184 f22019e8fdaab5faa847597e719f291b 573 Gene3D G3DSA:3.40.50.300 333 573 7.7E-75 T 14-10-2018 VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 183 1.2E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 3.3E-32 T 14-10-2018 VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 Gene3D G3DSA:3.40.50.1000 5 187 1.6E-49 T 14-10-2018 IPR023214 HAD superfamily VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 SUPERFAMILY SSF56784 1 215 8.27E-49 T 14-10-2018 IPR036412 HAD-like superfamily VS_II1350 c791d9ec66caf6b6298e62f48e3f31a0 219 Gene3D G3DSA:1.10.150.240 17 82 1.6E-49 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PIRSF PIRSF019574 4 350 2.8E-122 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 Gene3D G3DSA:3.40.190.10 134 323 1.7E-118 T 14-10-2018 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 SUPERFAMILY SSF53850 29 347 2.92E-92 T 14-10-2018 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 Pfam PF13416 Bacterial extracellular solute-binding protein 45 316 6.1E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 Gene3D G3DSA:3.40.190.10 34 317 1.7E-118 T 14-10-2018 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 151 165 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 250 269 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 169 188 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 206 225 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 295 321 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1478 f3ca7604e285ba2d7911e8ccfc33a87c 350 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 4.1E-83 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 SUPERFAMILY SSF51011 470 546 3.69E-19 T 14-10-2018 VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 SUPERFAMILY SSF51445 7 467 9.47E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 SMART SM00642 17 409 3.4E-149 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 Gene3D G3DSA:3.90.400.10 109 179 2.3E-197 T 14-10-2018 VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 Gene3D G3DSA:3.20.20.80 9 462 2.3E-197 T 14-10-2018 VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 Pfam PF16657 Maltogenic Amylase, C-terminal domain 470 542 2.6E-10 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 Gene3D G3DSA:2.60.40.1180 471 547 1.2E-20 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VS_II0163 e473d8957f2b7d958f0d94c474dd2bc8 547 Pfam PF00128 Alpha amylase, catalytic domain 32 367 3.2E-122 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 Gene3D G3DSA:3.40.50.300 4 210 4.6E-68 T 14-10-2018 VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 SMART SM00490 258 339 1.2E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 SUPERFAMILY SSF52540 74 359 1.88E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 Gene3D G3DSA:3.40.50.300 211 418 1.3E-46 T 14-10-2018 VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 Pfam PF00270 DEAD/DEAH box helicase 30 192 4.7E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 SMART SM00487 25 222 4.2E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1172 686a9691d46b43ad1fcf4160f7e6dc45 418 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0869 ab7860bae05845087601fa63547e0ff1 262 SUPERFAMILY SSF56436 37 260 1.62E-57 T 14-10-2018 IPR016187 C-type lectin fold VS_II0869 ab7860bae05845087601fa63547e0ff1 262 Pfam PF03781 Sulfatase-modifying factor enzyme 1 38 259 3.1E-49 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VS_II0869 ab7860bae05845087601fa63547e0ff1 262 Gene3D G3DSA:3.90.1580.10 29 260 2.3E-59 T 14-10-2018 VS_0782 cde521d7564874f123abe80dcff5d70d 460 Pfam PF13193 AMP-binding enzyme C-terminal domain 365 448 3.5E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VS_0782 cde521d7564874f123abe80dcff5d70d 460 Gene3D G3DSA:3.30.300.30 353 456 5.1E-15 T 14-10-2018 VS_0782 cde521d7564874f123abe80dcff5d70d 460 SUPERFAMILY SSF56801 18 458 3.53E-50 T 14-10-2018 VS_0782 cde521d7564874f123abe80dcff5d70d 460 Pfam PF00501 AMP-binding enzyme 17 291 5.3E-15 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_0782 cde521d7564874f123abe80dcff5d70d 460 Gene3D G3DSA:3.40.50.12780 11 352 4.5E-22 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 Gene3D G3DSA:3.40.1160.10 1 303 1.7E-102 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PRINTS PR01469 Bacterial carbamate kinase signature 177 195 8.4E-60 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PRINTS PR01469 Bacterial carbamate kinase signature 207 222 8.4E-60 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 8.4E-60 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 8.4E-60 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PRINTS PR01469 Bacterial carbamate kinase signature 154 173 8.4E-60 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 8.4E-60 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 8.4E-60 T 14-10-2018 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 PIRSF PIRSF000723 1 302 4.8E-101 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 SUPERFAMILY SSF53633 1 300 2.71E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_II1517 9f423649a044cd9d266bfddab7aadc73 309 Pfam PF00696 Amino acid kinase family 1 276 2.4E-23 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_2693 0fe46f9f4d9e36698feb4cd8cb44289d 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.0E-41 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VS_2693 0fe46f9f4d9e36698feb4cd8cb44289d 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.967 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VS_2693 0fe46f9f4d9e36698feb4cd8cb44289d 90 Gene3D G3DSA:1.10.3880.10 1 90 1.3E-38 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VS_2693 0fe46f9f4d9e36698feb4cd8cb44289d 90 SUPERFAMILY SSF111148 1 89 3.14E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VS_2693 0fe46f9f4d9e36698feb4cd8cb44289d 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 4.0E-37 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VS_2693 0fe46f9f4d9e36698feb4cd8cb44289d 90 PIRSF PIRSF029827 1 90 1.4E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VS_II0635 1599fd54e19c4fe7d2f5334d99dcdcbe 246 Gene3D G3DSA:2.60.40.10 29 151 1.1E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_II0635 1599fd54e19c4fe7d2f5334d99dcdcbe 246 SUPERFAMILY SSF49354 27 153 4.52E-8 T 14-10-2018 IPR008962 PapD-like superfamily VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 Gene3D G3DSA:1.10.10.10 1 79 2.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 SUPERFAMILY SSF46785 12 74 1.57E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 Gene3D G3DSA:1.20.120.530 80 149 9.2E-7 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 Gene3D G3DSA:1.20.120.530 154 278 6.7E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 8.8E-113 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 SUPERFAMILY SSF48008 79 270 2.88E-54 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 135.599 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 Pfam PF07840 FadR C-terminal domain 72 274 2.7E-65 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 1.6E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1007 509ad97bf5ff0fdbacf33dd6050aba65 279 SMART SM00345 12 71 1.7E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_2757 3c89601bc85076c598638308ca386a88 486 Gene3D G3DSA:1.10.10.60 426 483 2.2E-23 T 14-10-2018 VS_2757 3c89601bc85076c598638308ca386a88 486 Pfam PF04963 Sigma-54 factor, core binding domain 124 313 1.8E-57 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VS_2757 3c89601bc85076c598638308ca386a88 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 464 471 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 483 1.5E-154 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 373 392 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 PIRSF PIRSF000774 1 486 7.1E-150 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 Gene3D G3DSA:1.10.10.1330 126 246 2.6E-22 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VS_2757 3c89601bc85076c598638308ca386a88 486 PRINTS PR00045 Sigma-54 factor signature 196 213 2.0E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 PRINTS PR00045 Sigma-54 factor signature 459 477 2.0E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 PRINTS PR00045 Sigma-54 factor signature 385 397 2.0E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 PRINTS PR00045 Sigma-54 factor signature 401 412 2.0E-30 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 4.7E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VS_2757 3c89601bc85076c598638308ca386a88 486 Pfam PF04552 Sigma-54, DNA binding domain 326 484 1.3E-71 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VS_1635 d0af04c60d3b891f2b71e1c7e88e4645 332 SUPERFAMILY SSF64182 4 327 6.28E-41 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VS_2040 7945e560cd2454fb775573b72240e765 350 Pfam PF04055 Radical SAM superfamily 50 200 4.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_2040 7945e560cd2454fb775573b72240e765 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 3.0E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VS_2040 7945e560cd2454fb775573b72240e765 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 7.8E-124 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VS_2040 7945e560cd2454fb775573b72240e765 350 PIRSF PIRSF001619 1 319 2.3E-137 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VS_2040 7945e560cd2454fb775573b72240e765 350 SMART SM00876 220 312 2.2E-44 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VS_2040 7945e560cd2454fb775573b72240e765 350 SMART SM00729 43 255 4.1E-39 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_2040 7945e560cd2454fb775573b72240e765 350 Gene3D G3DSA:3.20.20.70 4 315 4.7E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2040 7945e560cd2454fb775573b72240e765 350 SUPERFAMILY SSF102114 5 310 1.96E-89 T 14-10-2018 VS_2040 7945e560cd2454fb775573b72240e765 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.29 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VS_0044 d624a3b4c63b3f8eb405097d1cdb2985 175 Pfam PF12724 Flavodoxin domain 5 153 1.7E-49 T 14-10-2018 IPR026816 Flavodoxin domain VS_0044 d624a3b4c63b3f8eb405097d1cdb2985 175 Gene3D G3DSA:3.40.50.360 2 126 1.9E-13 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0044 d624a3b4c63b3f8eb405097d1cdb2985 175 SUPERFAMILY SSF52218 3 158 2.55E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_II1068 ea00815cb644df25b82224a4d85980a8 316 Pfam PF01032 FecCD transport family 14 312 2.5E-57 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II1068 ea00815cb644df25b82224a4d85980a8 316 SUPERFAMILY SSF81345 9 312 1.44E-57 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II1068 ea00815cb644df25b82224a4d85980a8 316 Gene3D G3DSA:1.10.3470.10 4 316 4.5E-57 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0156 9769ae213b20a207f63e7bf5c696d553 604 Pfam PF00990 Diguanylate cyclase, GGDEF domain 443 582 2.5E-17 T 14-10-2018 IPR000160 GGDEF domain VS_II0156 9769ae213b20a207f63e7bf5c696d553 604 Gene3D G3DSA:3.30.70.270 437 598 2.1E-25 T 14-10-2018 VS_II0156 9769ae213b20a207f63e7bf5c696d553 604 SUPERFAMILY SSF55073 446 593 2.35E-22 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0156 9769ae213b20a207f63e7bf5c696d553 604 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 440 582 3.6E-17 T 14-10-2018 IPR000160 GGDEF domain VS_II0156 9769ae213b20a207f63e7bf5c696d553 604 Gene3D G3DSA:3.30.450.20 157 276 1.0E-6 T 14-10-2018 VS_II0156 9769ae213b20a207f63e7bf5c696d553 604 SMART SM00267 429 596 1.0E-17 T 14-10-2018 IPR000160 GGDEF domain VS_0357 325f7b59468baca1a7f751b78f18597e 156 SUPERFAMILY SSF46785 4 77 1.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0357 325f7b59468baca1a7f751b78f18597e 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 8.2E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_0357 325f7b59468baca1a7f751b78f18597e 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 8.2E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_0357 325f7b59468baca1a7f751b78f18597e 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 8.2E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_0357 325f7b59468baca1a7f751b78f18597e 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 8.2E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_0357 325f7b59468baca1a7f751b78f18597e 156 Gene3D G3DSA:3.30.1360.40 75 156 3.0E-34 T 14-10-2018 VS_0357 325f7b59468baca1a7f751b78f18597e 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.805 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_0357 325f7b59468baca1a7f751b78f18597e 156 SUPERFAMILY SSF55252 82 151 2.49E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VS_0357 325f7b59468baca1a7f751b78f18597e 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 3.5E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VS_0357 325f7b59468baca1a7f751b78f18597e 156 Gene3D G3DSA:1.10.10.10 1 74 2.8E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0357 325f7b59468baca1a7f751b78f18597e 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 4.4E-43 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VS_0357 325f7b59468baca1a7f751b78f18597e 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 5.0E-22 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VS_0357 325f7b59468baca1a7f751b78f18597e 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 3.9E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VS_0245 c7f41fb16cb4724d8d91d3613a901662 145 SUPERFAMILY SSF81343 27 145 9.37E-49 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_0245 c7f41fb16cb4724d8d91d3613a901662 145 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 27 145 24.341 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VS_0245 c7f41fb16cb4724d8d91d3613a901662 145 Pfam PF02313 Fumarate reductase subunit D 31 143 2.7E-44 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VS_0245 c7f41fb16cb4724d8d91d3613a901662 145 PIRSF PIRSF000179 26 145 2.2E-54 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VS_0245 c7f41fb16cb4724d8d91d3613a901662 145 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 31 145 9.0E-55 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VS_0245 c7f41fb16cb4724d8d91d3613a901662 145 Gene3D G3DSA:1.20.1300.10 26 145 4.4E-45 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VS_II0139 0ec182083c2c9da41193a9592e176a4a 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 2.6E-72 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VS_II0139 0ec182083c2c9da41193a9592e176a4a 497 SUPERFAMILY SSF53067 3 251 3.27E-58 T 14-10-2018 VS_II0139 0ec182083c2c9da41193a9592e176a4a 497 Gene3D G3DSA:3.30.420.40 1 240 6.1E-62 T 14-10-2018 VS_II0139 0ec182083c2c9da41193a9592e176a4a 497 PIRSF PIRSF000538 1 496 4.0E-97 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VS_II0139 0ec182083c2c9da41193a9592e176a4a 497 SUPERFAMILY SSF53067 256 490 2.48E-49 T 14-10-2018 VS_II0139 0ec182083c2c9da41193a9592e176a4a 497 Gene3D G3DSA:3.30.420.40 242 496 2.7E-52 T 14-10-2018 VS_II0139 0ec182083c2c9da41193a9592e176a4a 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 443 1.2E-24 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VS_1708 81080b138a581aeca4b564668db69eae 444 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 185 405 4.4E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VS_1708 81080b138a581aeca4b564668db69eae 444 Gene3D G3DSA:3.60.10.10 175 444 5.0E-65 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_1708 81080b138a581aeca4b564668db69eae 444 SUPERFAMILY SSF56219 178 443 5.1E-65 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_1032 6a9ec17fd4739267157d73fdd501c2ee 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.8E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_1032 6a9ec17fd4739267157d73fdd501c2ee 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_1032 6a9ec17fd4739267157d73fdd501c2ee 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 2.4E-194 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VS_1032 6a9ec17fd4739267157d73fdd501c2ee 476 SUPERFAMILY SSF55604 399 471 7.98E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_1032 6a9ec17fd4739267157d73fdd501c2ee 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 458 6.7E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VS_1032 6a9ec17fd4739267157d73fdd501c2ee 476 Gene3D G3DSA:3.30.1360.60 395 475 1.6E-28 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_1032 6a9ec17fd4739267157d73fdd501c2ee 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 4.5E-73 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 4.8E-113 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 28 281 5.6E-74 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 Gene3D G3DSA:3.10.580.10 307 465 1.7E-20 T 14-10-2018 VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 SMART SM00116 418 465 25.0 T 14-10-2018 IPR000644 CBS domain VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 SMART SM00116 320 368 0.12 T 14-10-2018 IPR000644 CBS domain VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 Gene3D G3DSA:1.20.1080.10 4 270 6.1E-87 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 Pfam PF01226 Formate/nitrite transporter 17 277 1.2E-70 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 SUPERFAMILY SSF54631 310 464 2.44E-18 T 14-10-2018 VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 Pfam PF00571 CBS domain 313 364 2.0E-6 T 14-10-2018 IPR000644 CBS domain VS_II0787 602085c894fed4ca2f2b9aa86dfd6981 483 Pfam PF00571 CBS domain 382 464 0.0079 T 14-10-2018 IPR000644 CBS domain VS_2831 c0e5847c92961a35589161572d19f9fd 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.9E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VS_2831 c0e5847c92961a35589161572d19f9fd 200 SUPERFAMILY SSF52166 9 199 3.01E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VS_2831 c0e5847c92961a35589161572d19f9fd 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.74 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2831 c0e5847c92961a35589161572d19f9fd 200 Gene3D G3DSA:3.40.1370.10 5 200 1.5E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VS_2831 c0e5847c92961a35589161572d19f9fd 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 1.7E-75 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1338 3477ebfab193e1c4a5b8a4e492aef958 199 Gene3D G3DSA:2.30.110.50 24 102 3.5E-45 T 14-10-2018 VS_1338 3477ebfab193e1c4a5b8a4e492aef958 199 SUPERFAMILY SSF69279 18 177 1.53E-42 T 14-10-2018 VS_1338 3477ebfab193e1c4a5b8a4e492aef958 199 Pfam PF05954 Phage late control gene D protein (GPD) 31 187 1.5E-40 T 14-10-2018 VS_1338 3477ebfab193e1c4a5b8a4e492aef958 199 Gene3D G3DSA:3.55.50.10 103 179 3.5E-45 T 14-10-2018 VS_II1116 69e33b116397696428b284472b6babac 284 Pfam PF00892 EamA-like transporter family 1 126 5.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1116 69e33b116397696428b284472b6babac 284 Pfam PF00892 EamA-like transporter family 142 272 6.9E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1116 69e33b116397696428b284472b6babac 284 SUPERFAMILY SSF103481 176 275 6.02E-15 T 14-10-2018 VS_II1116 69e33b116397696428b284472b6babac 284 SUPERFAMILY SSF103481 32 130 3.66E-17 T 14-10-2018 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR01900 YidC translocation/secretion protein signature 335 351 7.6E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR01900 YidC translocation/secretion protein signature 484 508 7.6E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR01900 YidC translocation/secretion protein signature 464 479 7.6E-25 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 248 263 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 495 518 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 320 340 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 458 480 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 70 91 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 411 434 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 160 180 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 PRINTS PR00701 60kDa inner membrane protein signature 213 231 9.9E-100 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 Pfam PF14849 YidC periplasmic domain 64 338 4.6E-84 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 349 529 1.7E-73 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 Pfam PF02096 60Kd inner membrane protein 350 529 2.3E-63 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 531 25.557 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 Gene3D G3DSA:2.70.98.90 60 329 1.9E-89 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily VS_0003 ff7a7aa6ce42a1dc471470abb0c6de21 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 347 1.1E-108 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal VS_0528 9096779a6de55aa9d432e8947f0ddf0a 462 SUPERFAMILY SSF46894 15 103 8.22E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_0528 9096779a6de55aa9d432e8947f0ddf0a 462 SUPERFAMILY SSF48452 333 425 8.34E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0528 9096779a6de55aa9d432e8947f0ddf0a 462 SMART SM00862 28 103 1.0E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0528 9096779a6de55aa9d432e8947f0ddf0a 462 Gene3D G3DSA:1.10.10.10 11 107 4.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0528 9096779a6de55aa9d432e8947f0ddf0a 462 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 103 1.3E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0141 cbfcda625f37afa50608396a0f789996 267 SUPERFAMILY SSF54523 82 245 6.28E-56 T 14-10-2018 VS_0141 cbfcda625f37afa50608396a0f789996 267 Gene3D G3DSA:3.10.610.10 80 192 2.0E-34 T 14-10-2018 VS_0141 cbfcda625f37afa50608396a0f789996 267 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 48 68 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0141 cbfcda625f37afa50608396a0f789996 267 Pfam PF07963 Prokaryotic N-terminal methylation motif 46 70 1.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0141 cbfcda625f37afa50608396a0f789996 267 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 48 70 2.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0141 cbfcda625f37afa50608396a0f789996 267 Gene3D G3DSA:2.10.70.20 194 242 2.7E-17 T 14-10-2018 VS_0141 cbfcda625f37afa50608396a0f789996 267 Pfam PF11612 Type II secretion system (T2SS), protein J 100 237 4.4E-40 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VS_0141 cbfcda625f37afa50608396a0f789996 267 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 48 239 8.5E-80 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Gene3D G3DSA:3.30.830.10 618 878 9.1E-110 T 14-10-2018 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Gene3D G3DSA:3.30.830.10 240 468 1.8E-69 T 14-10-2018 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 2.6E-21 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Pfam PF05193 Peptidase M16 inactive domain 648 823 9.0E-10 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 643 1.3E-82 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Gene3D G3DSA:3.30.830.10 1 238 1.3E-89 T 14-10-2018 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 SUPERFAMILY SSF63411 703 904 5.76E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 SUPERFAMILY SSF63411 233 468 6.17E-75 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 157 3.0E-38 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 Gene3D G3DSA:3.30.830.10 470 852 9.1E-110 T 14-10-2018 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 SUPERFAMILY SSF63411 470 694 9.73E-61 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VS_0866 daf8683ece84c0753817fee80dbd6c7a 925 SUPERFAMILY SSF63411 4 227 1.01E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 Gene3D G3DSA:1.20.1740.10 2 403 3.3E-10 T 14-10-2018 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site VS_II0802 c2110505468db16ed6cf29a847d513e0 407 Pfam PF03222 Tryptophan/tyrosine permease family 4 394 6.7E-109 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 38 57 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 83 103 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 334 353 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 11 34 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 149 169 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 222 241 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 183 205 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 313 331 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 PRINTS PR00166 Aromatic amino acid permease signature 279 298 8.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0802 c2110505468db16ed6cf29a847d513e0 407 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 383 3.6E-111 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1201 0e2c00939fa14bf805111bc1e4e62504 355 SMART SM00342 265 348 5.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1201 0e2c00939fa14bf805111bc1e4e62504 355 Pfam PF12833 Helix-turn-helix domain 271 349 9.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1201 0e2c00939fa14bf805111bc1e4e62504 355 Gene3D G3DSA:1.10.10.60 245 351 2.6E-24 T 14-10-2018 VS_II1201 0e2c00939fa14bf805111bc1e4e62504 355 SUPERFAMILY SSF46689 301 350 1.43E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0717 f6ba2e9da3156b138605db3f1b7db5e0 218 Gene3D G3DSA:3.30.160.150 24 174 4.0E-48 T 14-10-2018 VS_0717 f6ba2e9da3156b138605db3f1b7db5e0 218 Pfam PF04390 Lipopolysaccharide-assembly 40 161 2.9E-10 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VS_0717 f6ba2e9da3156b138605db3f1b7db5e0 218 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 23.7 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VS_0983 55f654304ea71d092bd9025e74a39d07 114 SUPERFAMILY SSF47226 4 110 1.7E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0983 55f654304ea71d092bd9025e74a39d07 114 Pfam PF01627 Hpt domain 25 98 1.5E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_0983 55f654304ea71d092bd9025e74a39d07 114 Gene3D G3DSA:1.20.120.160 2 112 1.9E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_2797 805a7c857950a5fe275bec48d4a3695f 584 SUPERFAMILY SSF55729 312 461 3.23E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2797 805a7c857950a5fe275bec48d4a3695f 584 Gene3D G3DSA:3.40.630.30 312 458 7.2E-6 T 14-10-2018 VS_2797 805a7c857950a5fe275bec48d4a3695f 584 Pfam PF01553 Acyltransferase 65 194 5.2E-7 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_2797 805a7c857950a5fe275bec48d4a3695f 584 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 7.7E-19 T 14-10-2018 VS_2797 805a7c857950a5fe275bec48d4a3695f 584 SUPERFAMILY SSF69593 44 252 9.81E-12 T 14-10-2018 VS_2797 805a7c857950a5fe275bec48d4a3695f 584 SMART SM00563 74 197 1.9E-8 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_II1114 61d53b20b040d5b783bf8d52c489e237 450 Pfam PF01554 MatE 10 175 1.3E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1114 61d53b20b040d5b783bf8d52c489e237 450 Pfam PF01554 MatE 238 401 4.7E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1114 61d53b20b040d5b783bf8d52c489e237 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 10 413 2.3E-52 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1393 66072603291a80e3c5f8734d72708aac 446 Pfam PF02264 LamB porin 69 446 2.3E-76 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VS_II1393 66072603291a80e3c5f8734d72708aac 446 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 97 424 3.0E-40 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VS_II1393 66072603291a80e3c5f8734d72708aac 446 Gene3D G3DSA:2.40.170.10 67 446 4.1E-67 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VS_II1393 66072603291a80e3c5f8734d72708aac 446 SUPERFAMILY SSF56935 68 446 3.24E-87 T 14-10-2018 VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 Pfam PF03880 DbpA RNA binding domain 395 465 1.1E-20 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 Pfam PF00271 Helicase conserved C-terminal domain 244 347 3.7E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 Gene3D G3DSA:3.30.70.330 394 467 3.8E-17 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 SUPERFAMILY SSF52540 82 364 8.58E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 Gene3D G3DSA:3.40.50.300 221 380 1.4E-46 T 14-10-2018 VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 SMART SM00490 266 347 1.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 Gene3D G3DSA:3.40.50.300 7 219 1.4E-74 T 14-10-2018 VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 Pfam PF00270 DEAD/DEAH box helicase 37 203 1.6E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II1163 4c209e5296a4cb1ad2c79f3faddb40c6 468 SMART SM00487 32 229 1.1E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_0699 00904733de39bdba47302cdbb04ea589 334 Pfam PF02424 ApbE family 31 310 6.2E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VS_0699 00904733de39bdba47302cdbb04ea589 334 Gene3D G3DSA:3.10.520.20 15 334 8.3E-113 T 14-10-2018 VS_0699 00904733de39bdba47302cdbb04ea589 334 PIRSF PIRSF006268 1 332 1.8E-94 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VS_0699 00904733de39bdba47302cdbb04ea589 334 SUPERFAMILY SSF143631 23 332 9.94E-101 T 14-10-2018 IPR003374 ApbE-like superfamily VS_II0904 a9cf68e4601601a0b8047371872f90c6 487 SUPERFAMILY SSF53720 7 485 5.24E-147 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_II0904 a9cf68e4601601a0b8047371872f90c6 487 Pfam PF00171 Aldehyde dehydrogenase family 23 481 4.9E-149 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_II0904 a9cf68e4601601a0b8047371872f90c6 487 Gene3D G3DSA:3.40.309.10 261 453 2.8E-147 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_II0904 a9cf68e4601601a0b8047371872f90c6 487 Gene3D G3DSA:3.40.605.10 20 477 2.8E-147 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_1778 df2953eb49c2815f72366dcb95f3e772 681 Pfam PF09423 PhoD-like phosphatase 320 594 7.9E-8 T 14-10-2018 IPR018946 Alkaline phosphatase D-related VS_1778 df2953eb49c2815f72366dcb95f3e772 681 Gene3D G3DSA:3.60.21.70 453 600 1.3E-5 T 14-10-2018 IPR038607 PhoD-like superfamily VS_1778 df2953eb49c2815f72366dcb95f3e772 681 SUPERFAMILY SSF56300 150 593 1.39E-11 T 14-10-2018 VS_0844 15279597e934f53af5df5314b2841c8a 374 SUPERFAMILY SSF52738 183 368 5.49E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VS_0844 15279597e934f53af5df5314b2841c8a 374 Pfam PF01339 CheB methylesterase 189 367 3.3E-57 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VS_0844 15279597e934f53af5df5314b2841c8a 374 Gene3D G3DSA:3.40.50.2300 2 130 2.8E-31 T 14-10-2018 VS_0844 15279597e934f53af5df5314b2841c8a 374 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 372 38.813 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VS_0844 15279597e934f53af5df5314b2841c8a 374 SMART SM00448 3 126 1.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0844 15279597e934f53af5df5314b2841c8a 374 Gene3D G3DSA:3.40.50.180 181 370 1.5E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VS_0844 15279597e934f53af5df5314b2841c8a 374 PIRSF PIRSF000876 1 372 8.7E-127 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VS_0844 15279597e934f53af5df5314b2841c8a 374 SUPERFAMILY SSF52172 2 109 1.2E-26 T 14-10-2018 IPR011006 CheY-like superfamily VS_0844 15279597e934f53af5df5314b2841c8a 374 Pfam PF00072 Response regulator receiver domain 5 109 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2691 6b6589c53969c542310687f2b9f05351 245 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 54 244 4.4E-67 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VS_2691 6b6589c53969c542310687f2b9f05351 245 Gene3D G3DSA:3.40.50.150 35 245 1.5E-68 T 14-10-2018 VS_2691 6b6589c53969c542310687f2b9f05351 245 Pfam PF02390 Putative methyltransferase 68 238 1.7E-57 T 14-10-2018 VS_2691 6b6589c53969c542310687f2b9f05351 245 SUPERFAMILY SSF53335 22 243 8.51E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2691 6b6589c53969c542310687f2b9f05351 245 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 29 244 29.701 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VS_II0979 5f5f178496ee951d397274ad418b5d8f 241 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 47 151 7.1E-19 T 14-10-2018 IPR032871 AHH domain-containing protein VS_II0711 938f2d42e37da314f1548787686c6beb 707 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 117 706 4.3E-181 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VS_II0711 938f2d42e37da314f1548787686c6beb 707 Gene3D G3DSA:3.20.70.20 122 688 1.5E-230 T 14-10-2018 VS_II0711 938f2d42e37da314f1548787686c6beb 707 ProSitePatterns PS00850 Glycine radical domain signature. 677 685 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VS_II0711 938f2d42e37da314f1548787686c6beb 707 SUPERFAMILY SSF51998 122 688 5.04E-189 T 14-10-2018 VS_II0711 938f2d42e37da314f1548787686c6beb 707 Pfam PF03477 ATP cone domain 5 90 1.1E-21 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VS_II0711 938f2d42e37da314f1548787686c6beb 707 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 116 706 8.6E-199 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VS_2383 a456e5c3c960c84c6013eb984d83719c 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 225 5.5E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2383 a456e5c3c960c84c6013eb984d83719c 227 SUPERFAMILY SSF161098 17 212 3.4E-47 T 14-10-2018 IPR035906 MetI-like superfamily VS_2383 a456e5c3c960c84c6013eb984d83719c 227 Gene3D G3DSA:1.10.3720.10 15 227 2.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily VS_0695 cefda68fbee62a83189235ef28e14d45 255 SMART SM00900 142 240 4.5E-32 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VS_0695 cefda68fbee62a83189235ef28e14d45 255 PIRSF PIRSF009437 1 255 6.9E-105 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VS_0695 cefda68fbee62a83189235ef28e14d45 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 248 7.1E-95 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VS_0695 cefda68fbee62a83189235ef28e14d45 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 252 35.915 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VS_0695 cefda68fbee62a83189235ef28e14d45 255 Pfam PF04205 FMN-binding domain 142 237 1.6E-14 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VS_2468 f3701620129b4dc370f262b245a2279b 153 SUPERFAMILY SSF55729 3 147 2.53E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2468 f3701620129b4dc370f262b245a2279b 153 Gene3D G3DSA:3.40.630.30 6 150 3.4E-43 T 14-10-2018 VS_2468 f3701620129b4dc370f262b245a2279b 153 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 145 2.4E-39 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VS_2468 f3701620129b4dc370f262b245a2279b 153 Pfam PF00583 Acetyltransferase (GNAT) family 28 123 1.8E-15 T 14-10-2018 IPR000182 GNAT domain VS_2469 c563267fd97d8e1a70e9451d47db67c8 132 PIRSF PIRSF029225 2 132 4.4E-39 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2469 c563267fd97d8e1a70e9451d47db67c8 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 37 128 8.0E-5 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2469 c563267fd97d8e1a70e9451d47db67c8 132 Pfam PF03603 DNA polymerase III psi subunit 4 129 2.1E-37 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2469 c563267fd97d8e1a70e9451d47db67c8 132 SUPERFAMILY SSF102220 35 132 1.31E-24 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2469 c563267fd97d8e1a70e9451d47db67c8 132 Gene3D G3DSA:3.40.50.10220 35 132 3.6E-28 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 535 560 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 SUPERFAMILY SSF51735 354 536 4.2E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Gene3D G3DSA:3.40.50.720 346 540 7.8E-59 T 14-10-2018 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 357 536 4.8E-53 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 42 747 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 142 162 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 37 747 52.255 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 SUPERFAMILY SSF48179 538 637 1.28E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 SUPERFAMILY SSF52096 42 347 1.66E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Gene3D G3DSA:1.10.1040.50 541 741 7.5E-70 T 14-10-2018 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Gene3D G3DSA:3.90.226.10 38 345 4.3E-95 T 14-10-2018 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 538 631 1.8E-23 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 659 733 2.6E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 Pfam PF00378 Enoyl-CoA hydratase/isomerase 55 265 2.1E-37 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VS_0865 f4662b583e6b0f27eb817af8394d8fac 748 SUPERFAMILY SSF48179 654 748 5.36E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 2.2E-55 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 2.2E-55 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 2.2E-55 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 2.2E-55 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 2.2E-55 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 2.2E-55 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 5.2E-137 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 PIRSF PIRSF001415 2 336 2.1E-147 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 Gene3D G3DSA:3.20.20.70 2 337 2.9E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 SUPERFAMILY SSF51569 7 335 2.93E-140 T 14-10-2018 VS_0105 63facf5ecb0834c1c085cfbdd69fa362 347 SMART SM01004 9 333 1.2E-229 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VS_II0120 852dbdc98120ce57f710402ce21989c5 113 SUPERFAMILY SSF46785 19 108 1.05E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0120 852dbdc98120ce57f710402ce21989c5 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 1.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_II0120 852dbdc98120ce57f710402ce21989c5 113 SMART SM00418 28 113 5.6E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_II0120 852dbdc98120ce57f710402ce21989c5 113 Gene3D G3DSA:1.10.10.10 15 113 7.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0120 852dbdc98120ce57f710402ce21989c5 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 5.7E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_II0120 852dbdc98120ce57f710402ce21989c5 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 5.7E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_2320 7bca25a162057324265d4332181d581c 281 Pfam PF13230 Glutamine amidotransferases class-II 1 259 5.1E-115 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VS_2320 7bca25a162057324265d4332181d581c 281 Gene3D G3DSA:3.60.20.10 1 258 5.4E-100 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_2320 7bca25a162057324265d4332181d581c 281 SUPERFAMILY SSF56235 2 253 1.2E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_2849 961afe9cd7420be6661e93739b8b42ce 194 Gene3D G3DSA:3.40.50.360 13 186 1.1E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2849 961afe9cd7420be6661e93739b8b42ce 194 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 189 47.331 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VS_2849 961afe9cd7420be6661e93739b8b42ce 194 Pfam PF02525 Flavodoxin-like fold 13 179 2.7E-40 T 14-10-2018 IPR003680 Flavodoxin-like fold VS_2849 961afe9cd7420be6661e93739b8b42ce 194 SUPERFAMILY SSF52218 12 184 2.72E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2957 33276a428cb0144eb1d0d8581f2ece0c 308 Gene3D G3DSA:3.40.50.720 34 300 8.5E-94 T 14-10-2018 VS_2957 33276a428cb0144eb1d0d8581f2ece0c 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 4.4E-48 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VS_2957 33276a428cb0144eb1d0d8581f2ece0c 308 SUPERFAMILY SSF52283 37 121 9.35E-7 T 14-10-2018 VS_2957 33276a428cb0144eb1d0d8581f2ece0c 308 SUPERFAMILY SSF51735 93 274 5.47E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2957 33276a428cb0144eb1d0d8581f2ece0c 308 Gene3D G3DSA:3.40.50.720 92 277 8.5E-94 T 14-10-2018 VS_0801 691633b61532a8fb90ca9e0cf0a47fa9 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 4.3E-29 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VS_0801 691633b61532a8fb90ca9e0cf0a47fa9 131 PIRSF PIRSF002889 1 131 1.1E-33 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VS_II0759 bc58d00021a4bce6496479b5b6951e60 205 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 188 1.6E-24 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain VS_II0759 bc58d00021a4bce6496479b5b6951e60 205 SUPERFAMILY SSF52266 27 204 1.37E-49 T 14-10-2018 VS_II0759 bc58d00021a4bce6496479b5b6951e60 205 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 28 38 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VS_II0759 bc58d00021a4bce6496479b5b6951e60 205 Gene3D G3DSA:3.40.50.1110 26 205 2.9E-64 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 Pfam PF00672 HAMP domain 205 250 2.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 SUPERFAMILY SSF58104 224 536 7.59E-63 T 14-10-2018 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 Gene3D G3DSA:1.10.287.950 203 534 8.9E-65 T 14-10-2018 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 498 2.3E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 2.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 2.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 2.4E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 SMART SM00283 271 532 4.9E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1807 c064c0d26d18f83ed83a3f2dd59abfad 544 SMART SM00304 203 256 1.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 Pfam PF00263 Bacterial type II and III secretion system protein 353 530 1.9E-41 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 236 530 6.0E-96 T 14-10-2018 IPR013358 Pilus biogenesis, MshL VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 348 372 2.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 270 280 2.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 495 513 2.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 518 532 2.1E-18 T 14-10-2018 IPR001775 GspD/PilQ family VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 SMART SM00965 94 142 5.0E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 Gene3D G3DSA:3.55.50.30 52 146 1.1E-8 T 14-10-2018 VS_0328 8995a90beaf61def4f81d90cfdd2df40 554 Pfam PF07655 Secretin N-terminal domain 146 241 7.5E-26 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VS_II0443 61cfac35dfecea722dd7d0dfbb773c0a 144 Pfam PF03733 Inner membrane component domain 4 54 7.2E-15 T 14-10-2018 IPR005185 Inner membrane component domain VS_II0443 61cfac35dfecea722dd7d0dfbb773c0a 144 Pfam PF03733 Inner membrane component domain 76 126 1.4E-18 T 14-10-2018 IPR005185 Inner membrane component domain VS_II0443 61cfac35dfecea722dd7d0dfbb773c0a 144 PIRSF PIRSF028777 1 138 2.2E-53 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 VS_1481 6337796bb3158519cb44abd2d5765e57 444 ProSitePatterns PS01219 Ammonium transporters signature. 205 230 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VS_1481 6337796bb3158519cb44abd2d5765e57 444 SUPERFAMILY SSF111352 55 422 2.09E-96 T 14-10-2018 VS_1481 6337796bb3158519cb44abd2d5765e57 444 Gene3D G3DSA:1.10.3430.10 34 444 9.0E-104 T 14-10-2018 IPR029020 Ammonium/urea transporter VS_1481 6337796bb3158519cb44abd2d5765e57 444 Pfam PF00909 Ammonium Transporter Family 61 437 8.2E-88 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VS_II0353 7e276b0314356385cec3e55da8d7e0ba 218 Gene3D G3DSA:1.10.10.10 1 90 2.7E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0353 7e276b0314356385cec3e55da8d7e0ba 218 Gene3D G3DSA:1.10.10.10 95 175 1.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0353 7e276b0314356385cec3e55da8d7e0ba 218 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 212 34.518 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VS_II0353 7e276b0314356385cec3e55da8d7e0ba 218 SUPERFAMILY SSF46785 3 84 7.25E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0353 7e276b0314356385cec3e55da8d7e0ba 218 SUPERFAMILY SSF46785 90 174 1.63E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0353 7e276b0314356385cec3e55da8d7e0ba 218 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.1E-63 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 SUPERFAMILY SSF51905 3 382 7.99E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2634 2b5c37ce05b37043a0376d3116076d59 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.5E-10 T 14-10-2018 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.5E-10 T 14-10-2018 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.5E-10 T 14-10-2018 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.5E-10 T 14-10-2018 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 3.4E-125 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 Pfam PF01494 FAD binding domain 4 337 1.0E-24 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 Gene3D G3DSA:3.50.50.60 5 336 1.4E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2634 2b5c37ce05b37043a0376d3116076d59 392 Gene3D G3DSA:3.30.9.50 81 270 1.4E-95 T 14-10-2018 VS_2634 2b5c37ce05b37043a0376d3116076d59 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 6.3E-149 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 SUPERFAMILY SSF56322 28 534 1.1E-158 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 Pfam PF04715 Anthranilate synthase component I, N terminal region 40 211 2.7E-16 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 PIRSF PIRSF001373 19 542 3.5E-257 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 Pfam PF00425 chorismate binding enzyme 263 523 1.6E-86 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 PRINTS PR00095 Anthranilate synthase component I signature 465 479 5.4E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 PRINTS PR00095 Anthranilate synthase component I signature 385 398 5.4E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 PRINTS PR00095 Anthranilate synthase component I signature 371 384 5.4E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 PRINTS PR00095 Anthranilate synthase component I signature 480 494 5.4E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 Gene3D G3DSA:3.60.120.10 24 540 1.5E-186 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VS_1966 c32805e13e133b1ac63040a09fe1d68f 545 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 38 535 2.2E-223 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_II1369 69ffd754bef44d0b86b68ada7200d6e0 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 400 9.5E-49 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1369 69ffd754bef44d0b86b68ada7200d6e0 448 PIRSF PIRSF006603 1 447 1.9E-63 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1369 69ffd754bef44d0b86b68ada7200d6e0 448 Pfam PF01554 MatE 240 392 9.6E-17 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1369 69ffd754bef44d0b86b68ada7200d6e0 448 Pfam PF01554 MatE 20 180 2.5E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2410 1bb37f2944bfce559649a7450ee146e7 214 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 72 208 2.1E-54 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2410 1bb37f2944bfce559649a7450ee146e7 214 SUPERFAMILY SSF52121 62 212 3.4E-60 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2410 1bb37f2944bfce559649a7450ee146e7 214 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 66 212 31.172 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2410 1bb37f2944bfce559649a7450ee146e7 214 Gene3D G3DSA:3.40.50.960 59 214 1.6E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2410 1bb37f2944bfce559649a7450ee146e7 214 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 71 209 1.3E-56 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_0994 573fd317931ea5f6c998a321392083a7 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 309 1.0E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_0994 573fd317931ea5f6c998a321392083a7 331 Gene3D G3DSA:3.40.50.300 7 331 6.0E-97 T 14-10-2018 VS_0994 573fd317931ea5f6c998a321392083a7 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 3.2E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_0994 573fd317931ea5f6c998a321392083a7 331 SMART SM00382 47 240 3.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0994 573fd317931ea5f6c998a321392083a7 331 Pfam PF00005 ABC transporter 39 190 1.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0994 573fd317931ea5f6c998a321392083a7 331 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0994 573fd317931ea5f6c998a321392083a7 331 SUPERFAMILY SSF52540 11 262 9.56E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0656 904d461d8530ef516617efae8c919abc 357 SUPERFAMILY SSF46626 171 327 1.03E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0656 904d461d8530ef516617efae8c919abc 357 Gene3D G3DSA:1.10.760.10 25 173 3.4E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0656 904d461d8530ef516617efae8c919abc 357 Gene3D G3DSA:1.10.760.10 174 342 1.4E-34 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0656 904d461d8530ef516617efae8c919abc 357 SUPERFAMILY SSF46626 19 165 1.3E-34 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_II0656 904d461d8530ef516617efae8c919abc 357 PIRSF PIRSF000294 18 333 2.9E-58 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VS_II0656 904d461d8530ef516617efae8c919abc 357 Pfam PF03150 Di-haem cytochrome c peroxidase 31 172 3.8E-30 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 SUPERFAMILY SSF52794 164 259 8.37E-35 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 248 8.1E-30 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 SUPERFAMILY SSF55804 1 145 3.66E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 Pfam PF02378 Phosphotransferase system, EIIC 291 566 1.8E-14 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 Gene3D G3DSA:3.40.930.10 1 147 9.5E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 Gene3D G3DSA:3.40.50.2300 152 263 3.9E-40 T 14-10-2018 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 256 3.9E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.5E-40 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.3E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II1320 77edbc5b12b1e573b924d14ee4f5de2d 634 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 618 6.7E-83 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VS_II0744 095c636a61e928a1c08c14c39126905b 125 Pfam PF11782 Protein of unknown function (DUF3319) 3 90 1.3E-40 T 14-10-2018 IPR021753 Protein of unknown function DUF3319 VS_II1066 83c7238790e509b6de333b218000998e 341 Gene3D G3DSA:3.40.50.2300 1 138 3.2E-35 T 14-10-2018 VS_II1066 83c7238790e509b6de333b218000998e 341 SMART SM00471 160 298 9.8E-8 T 14-10-2018 IPR003607 HD/PDEase domain VS_II1066 83c7238790e509b6de333b218000998e 341 SUPERFAMILY SSF52172 3 136 8.68E-36 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1066 83c7238790e509b6de333b218000998e 341 SMART SM00448 5 118 1.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1066 83c7238790e509b6de333b218000998e 341 Pfam PF01966 HD domain 167 288 2.6E-18 T 14-10-2018 IPR006674 HD domain VS_II1066 83c7238790e509b6de333b218000998e 341 Gene3D G3DSA:1.10.3210.10 139 341 1.0E-73 T 14-10-2018 VS_II1066 83c7238790e509b6de333b218000998e 341 SUPERFAMILY SSF109604 144 326 2.61E-41 T 14-10-2018 VS_II1066 83c7238790e509b6de333b218000998e 341 Pfam PF00072 Response regulator receiver domain 7 117 1.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 SUPERFAMILY SSF46785 3 112 8.86E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 Gene3D G3DSA:1.10.10.10 2 91 3.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 Gene3D G3DSA:3.40.190.290 92 282 8.3E-32 T 14-10-2018 VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 Pfam PF03466 LysR substrate binding domain 88 283 1.1E-21 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1183 242d8d16346d2a6d3694ebab0124cc43 288 SUPERFAMILY SSF53850 89 286 1.36E-24 T 14-10-2018 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 ProSitePatterns PS00785 5'-nucleotidase signature 1. 49 61 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 SUPERFAMILY SSF55816 378 554 2.49E-52 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 Gene3D G3DSA:3.90.780.10 377 563 1.8E-59 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 Pfam PF02872 5'-nucleotidase, C-terminal domain 378 524 3.4E-34 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 SUPERFAMILY SSF56300 43 374 2.0E-98 T 14-10-2018 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 Gene3D G3DSA:3.60.21.10 41 376 2.2E-127 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 PRINTS PR01607 Apyrase family signature 298 318 3.5E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 PRINTS PR01607 Apyrase family signature 47 65 3.5E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 PRINTS PR01607 Apyrase family signature 253 276 3.5E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 PRINTS PR01607 Apyrase family signature 431 454 3.5E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 PRINTS PR01607 Apyrase family signature 222 239 3.5E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 PRINTS PR01607 Apyrase family signature 498 517 3.5E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 Pfam PF00149 Calcineurin-like phosphoesterase 49 270 1.2E-21 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VS_0757 cc576318c4c7ad496e083b11b41dbec4 564 ProSitePatterns PS00786 5'-nucleotidase signature 2. 124 135 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.067 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 Gene3D G3DSA:1.10.150.170 112 218 1.6E-99 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 PIRSF PIRSF004486 1 316 8.5E-99 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 SUPERFAMILY SSF81799 113 216 3.14E-29 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 SUPERFAMILY SSF53335 7 316 4.58E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 Pfam PF01795 MraW methylase family 5 315 8.0E-108 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.1E-117 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VS_0442 9671a27dee36eeb729aa03e7fdb6f2cd 316 Gene3D G3DSA:3.40.50.150 10 315 1.6E-99 T 14-10-2018 VS_0535 5cd037ddf72cedba898937a804a90164 311 Pfam PF06574 FAD synthetase 11 166 4.7E-58 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VS_0535 5cd037ddf72cedba898937a804a90164 311 SMART SM00904 183 307 9.5E-62 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VS_0535 5cd037ddf72cedba898937a804a90164 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 4.8E-102 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VS_0535 5cd037ddf72cedba898937a804a90164 311 Pfam PF01687 Riboflavin kinase 184 306 4.9E-37 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VS_0535 5cd037ddf72cedba898937a804a90164 311 SUPERFAMILY SSF82114 174 307 2.83E-43 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VS_0535 5cd037ddf72cedba898937a804a90164 311 Gene3D G3DSA:2.40.30.30 188 311 2.9E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VS_0535 5cd037ddf72cedba898937a804a90164 311 Gene3D G3DSA:3.40.50.620 1 187 1.2E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0535 5cd037ddf72cedba898937a804a90164 311 PIRSF PIRSF004491 1 311 3.7E-106 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VS_0535 5cd037ddf72cedba898937a804a90164 311 SUPERFAMILY SSF52374 15 175 6.52E-36 T 14-10-2018 VS_1770 6df1458295437deee319fce4056d86cf 261 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 80 2.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1770 6df1458295437deee319fce4056d86cf 261 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1770 6df1458295437deee319fce4056d86cf 261 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1770 6df1458295437deee319fce4056d86cf 261 SUPERFAMILY SSF46689 23 85 8.21E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1770 6df1458295437deee319fce4056d86cf 261 Gene3D G3DSA:1.10.357.10 28 212 4.0E-17 T 14-10-2018 VS_1411 71065230005251325c57637d722ca77c 473 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 473 65.186 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VS_1411 71065230005251325c57637d722ca77c 473 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VS_1411 71065230005251325c57637d722ca77c 473 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 3.3E-11 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VS_1411 71065230005251325c57637d722ca77c 473 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 2.0E-28 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VS_1411 71065230005251325c57637d722ca77c 473 Gene3D G3DSA:3.40.50.150 2 308 6.7E-95 T 14-10-2018 VS_1411 71065230005251325c57637d722ca77c 473 Gene3D G3DSA:2.30.130.90 309 473 3.5E-67 T 14-10-2018 VS_1411 71065230005251325c57637d722ca77c 473 SUPERFAMILY SSF53335 7 308 4.26E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1411 71065230005251325c57637d722ca77c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_1411 71065230005251325c57637d722ca77c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_1411 71065230005251325c57637d722ca77c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_1411 71065230005251325c57637d722ca77c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_1411 71065230005251325c57637d722ca77c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.7E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VS_1411 71065230005251325c57637d722ca77c 473 Pfam PF01189 16S rRNA methyltransferase RsmB/F 116 306 1.5E-48 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VS_1411 71065230005251325c57637d722ca77c 473 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 8.1E-99 T 14-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VS_II0719 feff7a078304646175739f3013d42dbf 628 Gene3D G3DSA:3.30.450.20 67 171 1.6E-53 T 14-10-2018 VS_II0719 feff7a078304646175739f3013d42dbf 628 SUPERFAMILY SSF58104 319 628 1.96E-75 T 14-10-2018 VS_II0719 feff7a078304646175739f3013d42dbf 628 Gene3D G3DSA:1.10.287.950 297 628 2.8E-71 T 14-10-2018 VS_II0719 feff7a078304646175739f3013d42dbf 628 SMART SM00304 297 351 7.3E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II0719 feff7a078304646175739f3013d42dbf 628 Gene3D G3DSA:3.30.450.20 58 270 1.6E-53 T 14-10-2018 VS_II0719 feff7a078304646175739f3013d42dbf 628 SMART SM00283 366 627 2.0E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0719 feff7a078304646175739f3013d42dbf 628 Pfam PF02743 Cache domain 41 259 3.3E-24 T 14-10-2018 IPR033479 Double Cache domain 1 VS_II0719 feff7a078304646175739f3013d42dbf 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.7E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II0719 feff7a078304646175739f3013d42dbf 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 493 522 1.7E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II0719 feff7a078304646175739f3013d42dbf 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 437 594 1.6E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0719 feff7a078304646175739f3013d42dbf 628 SUPERFAMILY SSF103190 93 177 1.96E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II0719 feff7a078304646175739f3013d42dbf 628 Pfam PF00672 HAMP domain 299 348 2.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1130 dad27f14e5e1c6820c1100f81ec34fb5 603 Pfam PF06276 Ferric iron reductase FhuF-like transporter 398 547 7.5E-14 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain VS_II1130 dad27f14e5e1c6820c1100f81ec34fb5 603 Pfam PF04183 IucA / IucC family 161 374 2.8E-30 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 VS_II1130 dad27f14e5e1c6820c1100f81ec34fb5 603 Gene3D G3DSA:1.10.510.40 365 545 4.0E-10 T 14-10-2018 VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 Gene3D G3DSA:3.60.15.30 38 397 4.3E-127 T 14-10-2018 VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 Pfam PF00753 Metallo-beta-lactamase superfamily 136 362 1.3E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 SUPERFAMILY SSF55718 548 669 2.71E-27 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 Pfam PF14864 Alkyl sulfatase C-terminal 547 669 7.4E-32 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 Gene3D G3DSA:1.25.40.880 399 540 8.5E-51 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 SUPERFAMILY SSF56281 40 540 3.92E-124 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 Pfam PF14863 Alkyl sulfatase dimerisation 401 537 5.7E-51 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 Gene3D G3DSA:3.30.1050.10 541 675 3.7E-33 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VS_II0092 aeac17aee7fbc8ae8c0879f286f0f5e0 690 SMART SM00849 139 362 1.4E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_1415 7d8431fbb011a277ca88d8fe27b6d93b 163 Pfam PF13185 GAF domain 27 151 1.8E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VS_1415 7d8431fbb011a277ca88d8fe27b6d93b 163 Gene3D G3DSA:3.30.450.40 1 163 6.0E-60 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_1415 7d8431fbb011a277ca88d8fe27b6d93b 163 SUPERFAMILY SSF55781 3 151 9.81E-38 T 14-10-2018 VS_1415 7d8431fbb011a277ca88d8fe27b6d93b 163 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 95 112 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site VS_1534 745bf5d77387fb7d81f03fa635d740fe 395 SUPERFAMILY SSF53448 52 325 6.56E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1534 745bf5d77387fb7d81f03fa635d740fe 395 Pfam PF13641 Glycosyltransferase like family 2 57 278 2.7E-15 T 14-10-2018 VS_1534 745bf5d77387fb7d81f03fa635d740fe 395 Gene3D G3DSA:3.90.550.10 47 261 1.0E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0828 2f535b6eadf603172e78d8fb3b31a185 705 Gene3D G3DSA:3.30.750.140 556 671 1.4E-29 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VS_0828 2f535b6eadf603172e78d8fb3b31a185 705 Pfam PF02120 Flagellar hook-length control protein FliK 577 659 1.0E-22 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VS_2659 9c574af8a8aab6b98a0e96067546e587 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 91 9.6E-21 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VS_2659 9c574af8a8aab6b98a0e96067546e587 154 SMART SM00855 7 129 3.4E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VS_2659 9c574af8a8aab6b98a0e96067546e587 154 SUPERFAMILY SSF53254 7 134 5.11E-27 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VS_2659 9c574af8a8aab6b98a0e96067546e587 154 Gene3D G3DSA:3.40.50.1240 7 153 1.6E-24 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VS_2659 9c574af8a8aab6b98a0e96067546e587 154 PIRSF PIRSF000709 2 105 2.1E-6 T 14-10-2018 VS_0850 daf06598b5171ab2067977e3d560ac18 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.6E-90 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VS_0850 daf06598b5171ab2067977e3d560ac18 222 PIRSF PIRSF002764 1 222 1.5E-83 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VS_0850 daf06598b5171ab2067977e3d560ac18 222 Pfam PF03379 CcmB protein 5 219 4.8E-89 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_0850 daf06598b5171ab2067977e3d560ac18 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.3E-70 T 14-10-2018 VS_0850 daf06598b5171ab2067977e3d560ac18 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.3E-70 T 14-10-2018 VS_0850 daf06598b5171ab2067977e3d560ac18 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.3E-70 T 14-10-2018 VS_0850 daf06598b5171ab2067977e3d560ac18 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.3E-70 T 14-10-2018 VS_0850 daf06598b5171ab2067977e3d560ac18 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.3E-70 T 14-10-2018 VS_0850 daf06598b5171ab2067977e3d560ac18 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.3E-70 T 14-10-2018 VS_2527 cdf7b1cf4ee1d534a2a66231d79ca70b 252 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 245 8.4E-71 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VS_2527 cdf7b1cf4ee1d534a2a66231d79ca70b 252 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 251 54.334 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VS_2527 cdf7b1cf4ee1d534a2a66231d79ca70b 252 Pfam PF03749 Sugar fermentation stimulation protein 13 242 1.7E-70 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VS_2527 cdf7b1cf4ee1d534a2a66231d79ca70b 252 Gene3D G3DSA:3.40.1350.60 81 250 2.5E-52 T 14-10-2018 VS_2527 cdf7b1cf4ee1d534a2a66231d79ca70b 252 Gene3D G3DSA:2.40.50.580 1 80 4.0E-28 T 14-10-2018 VS_II0102 67deb86b0e45a3bc4d67ff97f0e03515 119 Gene3D G3DSA:3.30.70.100 22 119 2.1E-26 T 14-10-2018 VS_II0102 67deb86b0e45a3bc4d67ff97f0e03515 119 Pfam PF03992 Antibiotic biosynthesis monooxygenase 28 101 7.6E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VS_II0102 67deb86b0e45a3bc4d67ff97f0e03515 119 SUPERFAMILY SSF54909 25 114 4.54E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_2636 663ef9ec4aba0ae768f64640e4292ac7 102 SUPERFAMILY SSF102829 6 95 2.88E-23 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily VS_2636 663ef9ec4aba0ae768f64640e4292ac7 102 Pfam PF05164 Cell division protein ZapA 6 88 3.7E-19 T 14-10-2018 IPR007838 Cell division protein ZapA-like VS_2636 663ef9ec4aba0ae768f64640e4292ac7 102 Gene3D G3DSA:1.10.20.30 1 47 3.5E-19 T 14-10-2018 VS_II1195 080a9f8c0c4e487255a58bad07c31fce 164 Gene3D G3DSA:3.90.79.10 20 150 3.1E-22 T 14-10-2018 VS_II1195 080a9f8c0c4e487255a58bad07c31fce 164 SUPERFAMILY SSF55811 18 150 5.55E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_II1195 080a9f8c0c4e487255a58bad07c31fce 164 Pfam PF00293 NUDIX domain 30 136 3.1E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_0124 39ffce7363d5b1dff48e0d98feeec96d 176 Pfam PF13521 AAA domain 4 164 5.8E-36 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain VS_0124 39ffce7363d5b1dff48e0d98feeec96d 176 Gene3D G3DSA:3.40.50.300 1 167 2.9E-7 T 14-10-2018 VS_0124 39ffce7363d5b1dff48e0d98feeec96d 176 SUPERFAMILY SSF52540 4 169 5.69E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0006 9835218c466e432dbb5e87a29ca5db9e 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.832 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0006 9835218c466e432dbb5e87a29ca5db9e 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-13 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0006 9835218c466e432dbb5e87a29ca5db9e 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 1.9E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0006 9835218c466e432dbb5e87a29ca5db9e 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0006 9835218c466e432dbb5e87a29ca5db9e 44 Pfam PF00468 Ribosomal protein L34 1 43 5.6E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 Pfam PF00231 ATP synthase 3 288 2.3E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 Gene3D G3DSA:1.10.287.80 6 285 3.7E-107 T 14-10-2018 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 SUPERFAMILY SSF52943 2 289 1.08E-94 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 35.408 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 7.8E-107 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 Gene3D G3DSA:3.40.1380.10 61 208 3.7E-107 T 14-10-2018 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.9E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 1.9E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 1.9E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0913 0c74a60329aa7d194ade1c296e5580e5 289 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 1.9E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_0928 edd59fae7731dc24844323e43c5d9a25 271 Pfam PF13847 Methyltransferase domain 87 223 1.2E-12 T 14-10-2018 IPR025714 Methyltransferase domain VS_0928 edd59fae7731dc24844323e43c5d9a25 271 PIRSF PIRSF018249 1 270 8.5E-84 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VS_0928 edd59fae7731dc24844323e43c5d9a25 271 Gene3D G3DSA:3.40.50.150 1 271 1.0E-79 T 14-10-2018 VS_0928 edd59fae7731dc24844323e43c5d9a25 271 SUPERFAMILY SSF53335 4 252 2.92E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0557 80ba3ec8438a0eabca08ad809feef64a 111 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 3.0E-29 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VS_0557 80ba3ec8438a0eabca08ad809feef64a 111 Gene3D G3DSA:3.30.160.100 1 107 1.9E-31 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VS_0557 80ba3ec8438a0eabca08ad809feef64a 111 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 6.5E-21 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VS_0557 80ba3ec8438a0eabca08ad809feef64a 111 SUPERFAMILY SSF69754 1 102 1.44E-28 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VS_1027 0cfb4db5b8d3f928c5624fa2cca1285d 292 ProSitePatterns PS00770 Aminotransferases class-IV signature. 198 227 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VS_1027 0cfb4db5b8d3f928c5624fa2cca1285d 292 SUPERFAMILY SSF56752 1 283 1.57E-60 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VS_1027 0cfb4db5b8d3f928c5624fa2cca1285d 292 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 98 287 1.5E-75 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 VS_1027 0cfb4db5b8d3f928c5624fa2cca1285d 292 Gene3D G3DSA:3.30.470.10 1 135 5.4E-25 T 14-10-2018 VS_1027 0cfb4db5b8d3f928c5624fa2cca1285d 292 Gene3D G3DSA:3.20.10.10 136 292 8.9E-50 T 14-10-2018 VS_1027 0cfb4db5b8d3f928c5624fa2cca1285d 292 Pfam PF01063 Amino-transferase class IV 24 272 3.6E-39 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VS_II1362 653b1946187838f9c7d313bbb26966c9 578 SUPERFAMILY SSF53850 120 575 1.99E-54 T 14-10-2018 VS_II1362 653b1946187838f9c7d313bbb26966c9 578 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 476 1.2E-18 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II1362 653b1946187838f9c7d313bbb26966c9 578 Pfam PF12793 Sugar transport-related sRNA regulator N-term 17 99 7.6E-21 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VS_II1362 653b1946187838f9c7d313bbb26966c9 578 Gene3D G3DSA:3.10.105.10 371 548 2.7E-6 T 14-10-2018 VS_II1362 653b1946187838f9c7d313bbb26966c9 578 Gene3D G3DSA:3.40.190.10 120 334 4.6E-27 T 14-10-2018 VS_1146 b1033d92eb8696213a6cef72ddb532ef 142 PIRSF PIRSF007010 8 142 3.9E-50 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VS_1146 b1033d92eb8696213a6cef72ddb532ef 142 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 23 139 1.1E-49 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VS_1146 b1033d92eb8696213a6cef72ddb532ef 142 Gene3D G3DSA:3.30.300.250 30 141 6.8E-45 T 14-10-2018 VS_1400 f9bb5aa07191fb388a0753bf303f58c1 254 SUPERFAMILY SSF52540 13 247 1.39E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1400 f9bb5aa07191fb388a0753bf303f58c1 254 SMART SM00382 38 225 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1400 f9bb5aa07191fb388a0753bf303f58c1 254 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1400 f9bb5aa07191fb388a0753bf303f58c1 254 Pfam PF00005 ABC transporter 29 177 1.1E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1400 f9bb5aa07191fb388a0753bf303f58c1 254 PIRSF PIRSF039085 10 253 3.5E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VS_1400 f9bb5aa07191fb388a0753bf303f58c1 254 Gene3D G3DSA:3.40.50.300 12 254 1.3E-79 T 14-10-2018 VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 Gene3D G3DSA:1.10.10.160 115 188 1.1E-97 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 Gene3D G3DSA:1.10.486.10 383 539 3.0E-130 T 14-10-2018 VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 Gene3D G3DSA:3.40.50.300 11 275 1.1E-97 T 14-10-2018 VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 4.4E-72 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 Gene3D G3DSA:3.40.50.300 282 637 3.0E-130 T 14-10-2018 VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 3.0E-78 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VS_3084 64ed01487ad482bf27bcaef25b5e190c 724 SUPERFAMILY SSF52540 8 643 4.84E-178 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2414 ddc6ea36c54baff3a2d53e0770604326 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.874 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VS_2414 ddc6ea36c54baff3a2d53e0770604326 149 Pfam PF03477 ATP cone domain 50 136 1.5E-16 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VS_2414 ddc6ea36c54baff3a2d53e0770604326 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.3E-72 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VS_2536 c5f73abc2b1e5a5c6905d94826a77357 570 Pfam PF01740 STAS domain 455 547 1.0E-12 T 14-10-2018 IPR002645 STAS domain VS_2536 c5f73abc2b1e5a5c6905d94826a77357 570 SUPERFAMILY SSF52091 453 555 4.32E-11 T 14-10-2018 IPR036513 STAS domain superfamily VS_2536 c5f73abc2b1e5a5c6905d94826a77357 570 Pfam PF00916 Sulfate permease family 24 389 9.8E-82 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VS_2536 c5f73abc2b1e5a5c6905d94826a77357 570 Gene3D G3DSA:3.30.750.24 441 563 9.9E-14 T 14-10-2018 IPR036513 STAS domain superfamily VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 Gene3D G3DSA:2.40.50.140 4 105 6.1E-20 T 14-10-2018 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.499 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.5E-79 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.3E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 SUPERFAMILY SSF55681 97 464 7.76E-94 T 14-10-2018 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 6.9E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 Gene3D G3DSA:3.30.930.10 109 465 9.6E-108 T 14-10-2018 VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 SUPERFAMILY SSF50249 16 101 2.57E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1809 7bce5b8292b249c87cd0b62e21c4080f 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 6 466 1.5E-204 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VS_1441 7ae61704edaeccb9cbe976c413f5b011 344 Pfam PF13271 Domain of unknown function (DUF4062) 6 87 6.1E-27 T 14-10-2018 IPR025139 Domain of unknown function DUF4062 VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 Pfam PF06165 Glycosyltransferase family 36 21 267 3.6E-85 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 SUPERFAMILY SSF48208 273 800 4.42E-110 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 Gene3D G3DSA:2.70.98.40 1 302 3.1E-117 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 SUPERFAMILY SSF74650 1 269 5.02E-82 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 Gene3D G3DSA:2.60.420.10 722 801 4.8E-31 T 14-10-2018 VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 Gene3D G3DSA:1.50.10.10 311 721 3.8E-132 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 2.2E-210 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VS_2514 631f1997c84bd380ac83e0c2b8fd4730 801 SMART SM01068 1 63 3.9E-20 T 14-10-2018 IPR009342 Putative carbohydrate binding domain VS_0430 9a0a258b1f7740b03a3c206687c5e039 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.418 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VS_0430 9a0a258b1f7740b03a3c206687c5e039 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VS_0430 9a0a258b1f7740b03a3c206687c5e039 130 SUPERFAMILY SSF54211 5 130 1.67E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0430 9a0a258b1f7740b03a3c206687c5e039 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.5E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VS_0430 9a0a258b1f7740b03a3c206687c5e039 130 Gene3D G3DSA:3.30.230.10 1 130 4.0E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_II0834 a645f5a5b41d51190b398199e148ea6c 215 Pfam PF01810 LysE type translocator 25 214 1.9E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_II0834 a645f5a5b41d51190b398199e148ea6c 215 PIRSF PIRSF006324 7 215 1.2E-47 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_1064 132216925490c84328d515348cc74424 56 Pfam PF10689 Protein of unknown function (DUF2496) 9 51 9.2E-24 T 14-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VS_II0611 ded243137de26ca52cdff63a95ed1d4c 181 Pfam PF00583 Acetyltransferase (GNAT) family 48 141 6.8E-15 T 14-10-2018 IPR000182 GNAT domain VS_II0611 ded243137de26ca52cdff63a95ed1d4c 181 Gene3D G3DSA:3.40.630.30 2 156 2.5E-29 T 14-10-2018 VS_II0611 ded243137de26ca52cdff63a95ed1d4c 181 SUPERFAMILY SSF55729 1 144 1.48E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_0149 c0d9a6d62289b2113d6ca6678f601d85 237 Pfam PF00156 Phosphoribosyl transferase domain 140 234 1.7E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VS_0149 c0d9a6d62289b2113d6ca6678f601d85 237 Gene3D G3DSA:3.40.50.2020 73 237 8.4E-15 T 14-10-2018 VS_0149 c0d9a6d62289b2113d6ca6678f601d85 237 SUPERFAMILY SSF53271 59 234 1.23E-33 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_0802 c534c89041d2c9ddd88896c3010224a0 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VS_0802 c534c89041d2c9ddd88896c3010224a0 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 1.9E-51 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VS_0802 c534c89041d2c9ddd88896c3010224a0 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VS_0802 c534c89041d2c9ddd88896c3010224a0 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 135 2.9E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VS_II0603 c48cf9ad360829467314c4b13586734d 459 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 455 1.2E-124 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VS_II0603 c48cf9ad360829467314c4b13586734d 459 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 59 445 1.1E-141 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 23 437 3.5E-111 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 Pfam PF13533 Biotin-lipoyl like 67 110 8.1E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 301 322 2.6E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 334 358 2.6E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 2.6E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 416 436 2.6E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 416 2.6E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 381 2.6E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 2.6E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 SUPERFAMILY SSF56954 143 231 1.96E-6 T 14-10-2018 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 Gene3D G3DSA:1.20.1600.10 141 236 1.6E-5 T 14-10-2018 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 SUPERFAMILY SSF111369 67 155 4.84E-7 T 14-10-2018 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 Pfam PF13437 HlyD family secretion protein 289 397 1.8E-15 T 14-10-2018 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 Gene3D G3DSA:2.40.50.100 66 130 6.8E-7 T 14-10-2018 VS_II0511 8f983cda0e3f33d6b96a0261b3bf78ab 437 Gene3D G3DSA:2.40.30.170 302 419 5.7E-16 T 14-10-2018 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 SUPERFAMILY SSF56176 12 202 2.53E-38 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 Gene3D G3DSA:3.30.465.10 77 226 1.6E-50 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 Gene3D G3DSA:3.30.43.10 1 76 6.1E-23 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 13 337 7.5E-92 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 214 335 3.1E-31 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 SUPERFAMILY SSF56194 211 344 6.93E-46 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 Pfam PF01565 FAD binding domain 28 148 7.6E-17 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 Gene3D G3DSA:3.90.78.10 227 351 3.8E-42 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_2980 a73f054c92c58ca8c12e2dbe8e53b842 352 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 352 81.737 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VS_II0872 81dd7a081524e5a7a05d7f7066244b25 459 Pfam PF13584 Oxygen tolerance 77 305 1.0E-23 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD VS_0179 54dd227d098fc04f56afbba1656491ab 329 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 23 323 1.8E-125 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VS_0179 54dd227d098fc04f56afbba1656491ab 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 23 316 1.4E-72 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VS_0179 54dd227d098fc04f56afbba1656491ab 329 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 21 328 44.743 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VS_0179 54dd227d098fc04f56afbba1656491ab 329 PIRSF PIRSF026649 20 325 4.8E-82 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VS_1712 1bad6bca048595d31e994a166212a5eb 282 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 3.6E-32 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 SMART SM00387 335 446 3.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 SUPERFAMILY SSF55874 299 443 2.75E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 SUPERFAMILY SSF51206 19 131 8.77E-15 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 Gene3D G3DSA:2.60.120.10 14 131 1.2E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 445 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 Pfam PF00027 Cyclic nucleotide-binding domain 21 101 6.0E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 Gene3D G3DSA:1.10.287.130 132 250 6.6E-10 T 14-10-2018 VS_1275 fd393dbab2a55a0cc0d55b4993b6b4d7 451 Gene3D G3DSA:3.30.565.10 295 449 1.6E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_II1164 5c575107b378b26994fe0b351cbc38f4 302 SUPERFAMILY SSF51430 7 293 1.22E-69 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VS_II1164 5c575107b378b26994fe0b351cbc38f4 302 Gene3D G3DSA:3.20.20.100 1 302 3.5E-99 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VS_II1164 5c575107b378b26994fe0b351cbc38f4 302 Pfam PF00248 Aldo/keto reductase family 16 291 9.3E-59 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VS_II1164 5c575107b378b26994fe0b351cbc38f4 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 4.1E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VS_II1164 5c575107b378b26994fe0b351cbc38f4 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 4.1E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 SUPERFAMILY SSF50998 29 325 3.92E-44 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 Pfam PF00400 WD domain, G-beta repeat 158 190 0.006 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 SMART SM00320 152 190 1.9E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 SMART SM00320 26 63 170.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 SMART SM00320 234 275 0.39 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 SMART SM00320 66 107 30.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 SMART SM00320 286 324 22.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 SMART SM00320 193 231 0.17 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 Gene3D G3DSA:2.130.10.10 119 326 1.7E-33 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 Gene3D G3DSA:2.130.10.10 28 118 1.2E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_2843 e923949798ddcb1263393d2d8c1d8b3a 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 177 191 - T 14-10-2018 IPR019775 WD40 repeat, conserved site VS_0139 6a6b06e6f47142eca444f36aea100a69 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 2.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0139 6a6b06e6f47142eca444f36aea100a69 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 29 7.3E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0139 6a6b06e6f47142eca444f36aea100a69 197 Pfam PF12019 Type II transport protein GspH 45 183 1.4E-7 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VS_0139 6a6b06e6f47142eca444f36aea100a69 197 SUPERFAMILY SSF54523 10 82 1.18E-7 T 14-10-2018 VS_0139 6a6b06e6f47142eca444f36aea100a69 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 146 161 3.1E-20 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VS_0139 6a6b06e6f47142eca444f36aea100a69 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 20 34 3.1E-20 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VS_0139 6a6b06e6f47142eca444f36aea100a69 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 5 19 3.1E-20 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VS_0139 6a6b06e6f47142eca444f36aea100a69 197 Gene3D G3DSA:3.55.40.10 37 197 9.4E-46 T 14-10-2018 VS_2747 b92994c2b018832946aa6a7cec85e904 245 Gene3D G3DSA:3.10.450.710 58 237 8.7E-38 T 14-10-2018 VS_2747 b92994c2b018832946aa6a7cec85e904 245 Pfam PF05494 MlaC protein 67 233 2.5E-45 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VS_2747 b92994c2b018832946aa6a7cec85e904 245 PIRSF PIRSF004649 33 245 3.5E-56 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VS_1890 2f14f8dafbba4a49dd69427e271405f0 324 Gene3D G3DSA:1.10.150.130 2 95 8.0E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VS_1890 2f14f8dafbba4a49dd69427e271405f0 324 Pfam PF00589 Phage integrase family 106 306 4.0E-38 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VS_1890 2f14f8dafbba4a49dd69427e271405f0 324 Gene3D G3DSA:1.10.443.10 97 311 6.2E-65 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VS_1890 2f14f8dafbba4a49dd69427e271405f0 324 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 88 2.1E-21 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VS_1890 2f14f8dafbba4a49dd69427e271405f0 324 TIGRFAM TIGR02249 integrase_gron: integron integrase 6 320 1.5E-137 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VS_1890 2f14f8dafbba4a49dd69427e271405f0 324 SUPERFAMILY SSF56349 9 308 4.12E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VS_II1048 34f5b46917d4c99ce6255f865b518441 114 Pfam PF01844 HNH endonuclease 31 79 6.2E-11 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VS_II1048 34f5b46917d4c99ce6255f865b518441 114 SMART SM00507 19 74 2.9E-4 T 14-10-2018 IPR003615 HNH nuclease VS_0544 5acfaf4d167ca68c00b3b493400530bd 306 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.677 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VS_0544 5acfaf4d167ca68c00b3b493400530bd 306 SUPERFAMILY SSF53697 12 256 2.05E-73 T 14-10-2018 VS_0544 5acfaf4d167ca68c00b3b493400530bd 306 Gene3D G3DSA:1.10.8.1080 226 304 7.1E-27 T 14-10-2018 VS_0544 5acfaf4d167ca68c00b3b493400530bd 306 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VS_0544 5acfaf4d167ca68c00b3b493400530bd 306 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 1.2E-130 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VS_0544 5acfaf4d167ca68c00b3b493400530bd 306 Pfam PF13580 SIS domain 48 172 2.0E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_0544 5acfaf4d167ca68c00b3b493400530bd 306 Gene3D G3DSA:3.40.50.10490 8 225 1.0E-80 T 14-10-2018 VS_2338 070b1f22722232a13f152b0d0e069dd7 206 Pfam PF01351 Ribonuclease HII 22 198 8.9E-39 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain VS_2338 070b1f22722232a13f152b0d0e069dd7 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.467 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 VS_2338 070b1f22722232a13f152b0d0e069dd7 206 Gene3D G3DSA:3.30.420.10 3 206 3.6E-77 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2338 070b1f22722232a13f152b0d0e069dd7 206 SUPERFAMILY SSF53098 14 204 7.13E-70 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_0017 c7042dd1b7274d0bf9f9abb737610032 145 Pfam PF01478 Type IV leader peptidase family 10 107 4.3E-11 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VS_0017 c7042dd1b7274d0bf9f9abb737610032 145 Gene3D G3DSA:1.20.120.1220 4 113 3.3E-7 T 14-10-2018 VS_0723 c5707456c9ebb4eb5e0a5eab0ab48cf1 373 Gene3D G3DSA:3.40.50.300 117 323 3.7E-73 T 14-10-2018 VS_0723 c5707456c9ebb4eb5e0a5eab0ab48cf1 373 SUPERFAMILY SSF52540 100 320 3.45E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0723 c5707456c9ebb4eb5e0a5eab0ab48cf1 373 Pfam PF02562 PhoH-like protein 120 323 1.0E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VS_0723 c5707456c9ebb4eb5e0a5eab0ab48cf1 373 SUPERFAMILY SSF54791 16 81 7.45E-5 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VS_II1258 df4803289c1ae5bb9b7127d31c20191b 401 SUPERFAMILY SSF103473 5 389 5.23E-59 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II1258 df4803289c1ae5bb9b7127d31c20191b 401 Pfam PF07690 Major Facilitator Superfamily 21 354 3.7E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1258 df4803289c1ae5bb9b7127d31c20191b 401 Gene3D G3DSA:1.20.1250.20 8 391 1.1E-51 T 14-10-2018 VS_II0488 14ece28fadcee20a4afb0d6f6f8447af 711 TIGRFAM TIGR04456 LruC_dom: LruC domain 446 701 1.1E-80 T 14-10-2018 IPR031025 LruC domain VS_II0488 14ece28fadcee20a4afb0d6f6f8447af 711 SUPERFAMILY SSF75011 36 287 7.45E-12 T 14-10-2018 VS_II0488 14ece28fadcee20a4afb0d6f6f8447af 711 Pfam PF16130 Domain of unknown function (DUF4842) 479 700 2.1E-58 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 VS_II0037 8bd762253a10d732ec00cb08e616855a 130 SUPERFAMILY SSF55298 17 126 2.04E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0037 8bd762253a10d732ec00cb08e616855a 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 2.9E-21 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_II0037 8bd762253a10d732ec00cb08e616855a 130 Gene3D G3DSA:3.30.1330.40 16 129 8.9E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0396 37adcb57a132d8cb40233472629b0852 272 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 272 139.436 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VS_II0396 37adcb57a132d8cb40233472629b0852 272 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 7 260 3.5E-113 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VS_II0396 37adcb57a132d8cb40233472629b0852 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 206 8.1E-8 T 14-10-2018 VS_II0396 37adcb57a132d8cb40233472629b0852 272 Gene3D G3DSA:1.10.150.240 25 103 6.1E-94 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_II0396 37adcb57a132d8cb40233472629b0852 272 SUPERFAMILY SSF56784 7 262 5.35E-49 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0396 37adcb57a132d8cb40233472629b0852 272 Gene3D G3DSA:3.40.50.1000 9 272 6.1E-94 T 14-10-2018 IPR023214 HAD superfamily VS_II0396 37adcb57a132d8cb40233472629b0852 272 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 38 206 3.7E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 SUPERFAMILY SSF53067 136 308 5.05E-44 T 14-10-2018 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 Gene3D G3DSA:3.30.420.40 13 302 2.5E-88 T 14-10-2018 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 SUPERFAMILY SSF109604 312 502 1.73E-48 T 14-10-2018 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 Gene3D G3DSA:1.10.3210.10 309 503 6.2E-60 T 14-10-2018 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 Pfam PF02541 Ppx/GppA phosphatase family 25 307 1.8E-85 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 Gene3D G3DSA:3.30.420.150 116 294 2.5E-88 T 14-10-2018 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 SUPERFAMILY SSF53067 12 131 6.64E-37 T 14-10-2018 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 PIRSF PIRSF001267 4 503 5.6E-191 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VS_0582 c508dd559f81bb2a189938c19c5d2747 503 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 1.9E-96 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VS_2923 5d35a82732583d0ee1a315ec9c8f3a28 482 Pfam PF03606 C4-dicarboxylate anaerobic carrier 21 478 4.5E-136 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VS_1271 cf01b6e6b3ed6a9aedf935fcae9a5c3d 158 SUPERFAMILY SSF55729 6 140 2.48E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1271 cf01b6e6b3ed6a9aedf935fcae9a5c3d 158 Pfam PF13508 Acetyltransferase (GNAT) domain 55 134 4.8E-8 T 14-10-2018 IPR000182 GNAT domain VS_1271 cf01b6e6b3ed6a9aedf935fcae9a5c3d 158 Gene3D G3DSA:3.40.630.30 6 153 3.6E-16 T 14-10-2018 VS_II0438 5587c51eeaea9e605c5df30be52b60b9 407 Pfam PF05684 Protein of unknown function (DUF819) 11 403 8.6E-98 T 14-10-2018 IPR008537 Protein of unknown function DUF819 VS_II0438 5587c51eeaea9e605c5df30be52b60b9 407 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 7.1E-6 T 14-10-2018 VS_II0438 5587c51eeaea9e605c5df30be52b60b9 407 PRINTS PR00173 Glutamate-aspartate symporter signature 349 375 7.1E-6 T 14-10-2018 VS_II0438 5587c51eeaea9e605c5df30be52b60b9 407 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 7.1E-6 T 14-10-2018 VS_2403 3222c493d81ed9d541588127acd41890 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 1.2E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VS_2403 3222c493d81ed9d541588127acd41890 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VS_3006 4e550f2f2a07e770b003ac514604a358 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 4.5E-80 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VS_3006 4e550f2f2a07e770b003ac514604a358 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VS_3006 4e550f2f2a07e770b003ac514604a358 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VS_3006 4e550f2f2a07e770b003ac514604a358 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VS_3006 4e550f2f2a07e770b003ac514604a358 206 Pfam PF00717 Peptidase S24-like 118 184 1.5E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VS_3006 4e550f2f2a07e770b003ac514604a358 206 SUPERFAMILY SSF46785 3 69 1.51E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_3006 4e550f2f2a07e770b003ac514604a358 206 SUPERFAMILY SSF51306 79 202 1.92E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VS_3006 4e550f2f2a07e770b003ac514604a358 206 Gene3D G3DSA:1.10.10.10 1 69 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_3006 4e550f2f2a07e770b003ac514604a358 206 Gene3D G3DSA:2.10.109.10 84 206 1.2E-43 T 14-10-2018 VS_3006 4e550f2f2a07e770b003ac514604a358 206 Pfam PF01726 LexA DNA binding domain 1 65 3.0E-28 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VS_3006 4e550f2f2a07e770b003ac514604a358 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.464 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VS_0385 df29d708b7043b17979df388fef15d0b 351 Pfam PF13528 Glycosyl transferase family 1 1 302 1.2E-39 T 14-10-2018 VS_0385 df29d708b7043b17979df388fef15d0b 351 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 314 3.5E-97 T 14-10-2018 IPR005262 Conserved hypothetical protein CHP00661 VS_0385 df29d708b7043b17979df388fef15d0b 351 SUPERFAMILY SSF53756 1 301 5.58E-11 T 14-10-2018 VS_II0027 6fc0d9b9170a622932b9e9dc53567207 324 SUPERFAMILY SSF55909 18 312 1.23E-34 T 14-10-2018 VS_II0027 6fc0d9b9170a622932b9e9dc53567207 324 PIRSF PIRSF028188 2 320 8.0E-143 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type VS_II0027 6fc0d9b9170a622932b9e9dc53567207 324 Gene3D G3DSA:3.75.10.10 17 312 3.4E-40 T 14-10-2018 VS_II0027 6fc0d9b9170a622932b9e9dc53567207 324 Pfam PF02274 Amidinotransferase 22 317 4.1E-60 T 14-10-2018 VS_0097 cd7cbebd0e92d7414b3c0db54ddd5b15 510 Pfam PF02646 RmuC family 181 478 4.2E-107 T 14-10-2018 IPR003798 DNA recombination RmuC VS_II1152 0854d48791466ba54f795c97c18bde06 244 SUPERFAMILY SSF55315 4 93 1.51E-11 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VS_II1152 0854d48791466ba54f795c97c18bde06 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.5E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VS_II1152 0854d48791466ba54f795c97c18bde06 244 SUPERFAMILY SSF75217 97 243 2.88E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_II1152 0854d48791466ba54f795c97c18bde06 244 Gene3D G3DSA:3.30.1330.30 1 93 5.8E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VS_II1152 0854d48791466ba54f795c97c18bde06 244 Gene3D G3DSA:3.40.1280.10 97 244 5.1E-41 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_2850 00c707d75030ea7d31e589216b914380 640 SUPERFAMILY SSF52540 2 255 8.89E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2850 00c707d75030ea7d31e589216b914380 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2850 00c707d75030ea7d31e589216b914380 640 Pfam PF00005 ABC transporter 328 459 6.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2850 00c707d75030ea7d31e589216b914380 640 Gene3D G3DSA:3.40.50.300 7 274 5.4E-57 T 14-10-2018 VS_2850 00c707d75030ea7d31e589216b914380 640 SUPERFAMILY SSF52540 277 494 4.24E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2850 00c707d75030ea7d31e589216b914380 640 Gene3D G3DSA:3.40.50.300 275 537 2.6E-53 T 14-10-2018 VS_2850 00c707d75030ea7d31e589216b914380 640 SMART SM00382 26 223 2.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2850 00c707d75030ea7d31e589216b914380 640 SMART SM00382 337 503 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2850 00c707d75030ea7d31e589216b914380 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2850 00c707d75030ea7d31e589216b914380 640 Pfam PF00005 ABC transporter 17 178 2.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2850 00c707d75030ea7d31e589216b914380 640 Pfam PF12848 ABC transporter 217 295 2.1E-26 T 14-10-2018 IPR032781 ABC-transporter extension domain VS_II0137 8f078a457a050d59ad268e88714fcf1a 252 SUPERFAMILY SSF46785 5 78 1.34E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0137 8f078a457a050d59ad268e88714fcf1a 252 Pfam PF01614 Bacterial transcriptional regulator 125 247 7.9E-33 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VS_II0137 8f078a457a050d59ad268e88714fcf1a 252 Gene3D G3DSA:1.10.10.10 2 76 6.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0137 8f078a457a050d59ad268e88714fcf1a 252 Pfam PF09339 IclR helix-turn-helix domain 7 56 5.9E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VS_II0137 8f078a457a050d59ad268e88714fcf1a 252 Gene3D G3DSA:3.30.450.40 77 252 2.0E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_II0137 8f078a457a050d59ad268e88714fcf1a 252 SUPERFAMILY SSF55781 78 251 5.76E-38 T 14-10-2018 VS_II0137 8f078a457a050d59ad268e88714fcf1a 252 SMART SM00346 5 94 3.0E-22 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VS_0764 95f74ed8db97854d961674b7dc9ab72e 295 Pfam PF01963 TraB family 25 278 6.0E-54 T 14-10-2018 IPR002816 Pheromone shutdown, TraB VS_II0062 35787418bac527f70392ab4842d1eca2 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II0062 35787418bac527f70392ab4842d1eca2 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II0062 35787418bac527f70392ab4842d1eca2 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II0062 35787418bac527f70392ab4842d1eca2 160 Gene3D G3DSA:1.10.10.10 2 137 2.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0062 35787418bac527f70392ab4842d1eca2 160 SUPERFAMILY SSF46785 3 139 4.43E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0062 35787418bac527f70392ab4842d1eca2 160 Pfam PF01047 MarR family 31 89 3.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II0062 35787418bac527f70392ab4842d1eca2 160 SMART SM00347 24 124 3.7E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1024 8b1aea95790f360a604338952feb6138 319 Pfam PF01551 Peptidase family M23 185 278 1.9E-25 T 14-10-2018 IPR016047 Peptidase M23 VS_II1024 8b1aea95790f360a604338952feb6138 319 SUPERFAMILY SSF51261 63 282 4.66E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_II1024 8b1aea95790f360a604338952feb6138 319 Gene3D G3DSA:2.70.70.10 159 283 1.2E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_II1024 8b1aea95790f360a604338952feb6138 319 Gene3D G3DSA:3.10.450.350 59 155 3.7E-9 T 14-10-2018 VS_0284 73c35daa9c1e4e4831ef701f9a97b0b3 463 SUPERFAMILY SSF48024 17 128 3.14E-36 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VS_0284 73c35daa9c1e4e4831ef701f9a97b0b3 463 SUPERFAMILY SSF52540 196 448 4.24E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0284 73c35daa9c1e4e4831ef701f9a97b0b3 463 Pfam PF00772 DnaB-like helicase N terminal domain 19 119 3.4E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VS_0284 73c35daa9c1e4e4831ef701f9a97b0b3 463 Gene3D G3DSA:1.10.860.10 11 175 4.6E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VS_0284 73c35daa9c1e4e4831ef701f9a97b0b3 463 Gene3D G3DSA:3.40.50.300 176 457 1.2E-105 T 14-10-2018 VS_0284 73c35daa9c1e4e4831ef701f9a97b0b3 463 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 456 2.2E-174 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VS_0284 73c35daa9c1e4e4831ef701f9a97b0b3 463 Pfam PF03796 DnaB-like helicase C terminal domain 198 454 3.7E-112 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VS_II1005 9f1b5157be196741b0fc1187eb177548 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 7.6E-29 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VS_II1005 9f1b5157be196741b0fc1187eb177548 172 SUPERFAMILY SSF141452 3 168 3.66E-38 T 14-10-2018 IPR036624 Hcp1-like superfamily VS_II1005 9f1b5157be196741b0fc1187eb177548 172 Gene3D G3DSA:2.30.110.20 2 172 3.4E-61 T 14-10-2018 IPR036624 Hcp1-like superfamily VS_II1005 9f1b5157be196741b0fc1187eb177548 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.4E-63 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 Gene3D G3DSA:1.25.40.10 23 179 2.4E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 SUPERFAMILY SSF48452 110 282 4.17E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 5 390 36.777 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 SUPERFAMILY SSF48452 36 136 3.58E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 Pfam PF13176 Tetratricopeptide repeat 72 95 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 Gene3D G3DSA:1.25.40.10 180 353 2.7E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 SMART SM00028 183 216 0.028 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 SMART SM00028 70 103 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2054 0e836ab0dd40ae4e5ca1c423463596c6 392 SMART SM00028 217 250 5.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_0283 b3d5487ad58daa95aa91583ac7eeeffc 330 SUPERFAMILY SSF56935 113 281 1.74E-5 T 14-10-2018 VS_0283 b3d5487ad58daa95aa91583ac7eeeffc 330 Pfam PF04338 Protein of unknown function, DUF481 115 330 1.1E-52 T 14-10-2018 IPR007433 Protein of unknown function DUF481 VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 Pfam PF04055 Radical SAM superfamily 373 578 1.1E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 640 48.749 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 Pfam PF08497 Radical SAM N-terminal 24 372 1.9E-140 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 373 393 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 Pfam PF11842 Domain of unknown function (DUF3362) 587 729 1.6E-42 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 SUPERFAMILY SSF102114 372 607 1.57E-10 T 14-10-2018 VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 SMART SM00729 369 619 2.2E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 Gene3D G3DSA:3.80.30.20 368 623 3.8E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VS_1141 55b288eb3897ac1e75c7d1ca07dfe945 792 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 638 6.4E-260 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 SUPERFAMILY SSF53671 4 335 6.68E-100 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 8.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 8.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 8.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 8.1E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.0E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 332 8.9E-58 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 4.0E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 Gene3D G3DSA:3.40.50.1370 152 321 6.8E-143 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 4.9E-132 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 82.587 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VS_2926 109e43463ad3f7d2238e0b2db3db3043 336 Gene3D G3DSA:3.40.50.1370 5 331 6.8E-143 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_1706 0a301c152d2707eab3096d55f0301907 253 Gene3D G3DSA:3.40.50.620 63 198 5.2E-6 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_1706 0a301c152d2707eab3096d55f0301907 253 Pfam PF02698 DUF218 domain 69 230 4.9E-25 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VS_3149 918f00dd400ab7449d8e66ea88dabdb5 403 Pfam PF07690 Major Facilitator Superfamily 12 340 4.2E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_3149 918f00dd400ab7449d8e66ea88dabdb5 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 370 2.3E-84 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VS_3149 918f00dd400ab7449d8e66ea88dabdb5 403 SUPERFAMILY SSF103473 6 374 1.28E-51 T 14-10-2018 IPR036259 MFS transporter superfamily VS_3149 918f00dd400ab7449d8e66ea88dabdb5 403 Gene3D G3DSA:1.20.1720.10 8 379 1.4E-73 T 14-10-2018 VS_1494 67a6b11975a85c8a73a46bf60d918c6d 293 Pfam PF00005 ABC transporter 18 184 3.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1494 67a6b11975a85c8a73a46bf60d918c6d 293 SMART SM00382 26 245 2.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1494 67a6b11975a85c8a73a46bf60d918c6d 293 SUPERFAMILY SSF52540 4 239 3.58E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1494 67a6b11975a85c8a73a46bf60d918c6d 293 Gene3D G3DSA:3.40.50.300 2 270 2.6E-53 T 14-10-2018 VS_0031 7fb4317cd2f4d96291c7e4922799d210 226 Gene3D G3DSA:1.10.10.10 124 226 9.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0031 7fb4317cd2f4d96291c7e4922799d210 226 SUPERFAMILY SSF52172 3 181 3.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily VS_0031 7fb4317cd2f4d96291c7e4922799d210 226 Pfam PF00072 Response regulator receiver domain 3 113 4.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0031 7fb4317cd2f4d96291c7e4922799d210 226 SMART SM00448 1 113 5.5E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0031 7fb4317cd2f4d96291c7e4922799d210 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 3.7E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0031 7fb4317cd2f4d96291c7e4922799d210 226 SMART SM00862 146 221 7.5E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0031 7fb4317cd2f4d96291c7e4922799d210 226 Gene3D G3DSA:3.40.50.2300 1 122 7.4E-36 T 14-10-2018 VS_1933 66968518a461b9812f2a2e43263efcbc 462 Gene3D G3DSA:1.10.1130.10 25 455 2.4E-187 T 14-10-2018 VS_1933 66968518a461b9812f2a2e43263efcbc 462 Pfam PF02335 Cytochrome c552 26 455 4.1E-181 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VS_1933 66968518a461b9812f2a2e43263efcbc 462 PIRSF PIRSF000243 3 462 1.2E-127 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VS_1933 66968518a461b9812f2a2e43263efcbc 462 SUPERFAMILY SSF48695 22 456 1.56E-162 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VS_1933 66968518a461b9812f2a2e43263efcbc 462 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 22 458 1.9E-247 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VS_1933 66968518a461b9812f2a2e43263efcbc 462 Gene3D G3DSA:1.20.140.10 294 436 2.4E-187 T 14-10-2018 VS_1933 66968518a461b9812f2a2e43263efcbc 462 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 460 56.88 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VS_1279 6971079391ac563850c915d3f3762939 155 Gene3D G3DSA:2.40.50.140 1 74 7.3E-16 T 14-10-2018 VS_1279 6971079391ac563850c915d3f3762939 155 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 33 - T 14-10-2018 IPR019844 Cold-shock conserved site VS_1279 6971079391ac563850c915d3f3762939 155 Pfam PF05901 Excalibur calcium-binding domain 116 148 6.2E-9 T 14-10-2018 IPR008613 Excalibur calcium-binding domain VS_1279 6971079391ac563850c915d3f3762939 155 Pfam PF00313 'Cold-shock' DNA-binding domain 5 61 2.6E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_1279 6971079391ac563850c915d3f3762939 155 SUPERFAMILY SSF50249 5 65 8.14E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_1279 6971079391ac563850c915d3f3762939 155 SMART SM00357 2 65 5.8E-9 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 SUPERFAMILY SSF53067 3 195 2.01E-63 T 14-10-2018 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.3E-168 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 Gene3D G3DSA:3.30.420.40 2 194 3.8E-72 T 14-10-2018 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 PRINTS PR00471 Acetate kinase family signature 172 185 7.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 PRINTS PR00471 Acetate kinase family signature 377 389 7.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 PRINTS PR00471 Acetate kinase family signature 298 311 7.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 PRINTS PR00471 Acetate kinase family signature 321 337 7.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 PRINTS PR00471 Acetate kinase family signature 5 16 7.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 PRINTS PR00471 Acetate kinase family signature 202 223 7.4E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 186.101 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 SUPERFAMILY SSF53067 157 395 1.3E-84 T 14-10-2018 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 Pfam PF00871 Acetokinase family 5 390 2.0E-163 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 Gene3D G3DSA:3.30.420.40 195 397 9.5E-82 T 14-10-2018 VS_0998 c32c713addc4752cd69d0c53e48242c6 398 PIRSF PIRSF000722 1 397 5.1E-145 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VS_2148 f0810da6239e8d1ef2965fd38ea7261d 204 Pfam PF01810 LysE type translocator 15 202 1.5E-24 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_2148 f0810da6239e8d1ef2965fd38ea7261d 204 PIRSF PIRSF006324 1 204 2.6E-47 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_1370 139066f7ac701ae36b48029ab08d48af 362 SMART SM00507 184 237 0.0083 T 14-10-2018 IPR003615 HNH nuclease VS_2507 aa78b4217c4775b13d5fc32a74c7ecaf 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 6.3E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2507 aa78b4217c4775b13d5fc32a74c7ecaf 328 SUPERFAMILY SSF161098 94 324 1.44E-13 T 14-10-2018 IPR035906 MetI-like superfamily VS_2507 aa78b4217c4775b13d5fc32a74c7ecaf 328 Gene3D G3DSA:1.10.3720.10 87 327 3.3E-18 T 14-10-2018 IPR035906 MetI-like superfamily VS_1373 72d654bc3271314c2804f2d0527a4034 218 Gene3D G3DSA:3.30.1330.60 45 206 6.6E-13 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1373 72d654bc3271314c2804f2d0527a4034 218 SUPERFAMILY SSF103088 78 199 4.45E-13 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1373 72d654bc3271314c2804f2d0527a4034 218 Pfam PF00691 OmpA family 89 180 9.6E-8 T 14-10-2018 IPR006665 OmpA-like domain VS_II0916 7be4b30cb0d7301fb18407ee3ffc7269 182 SUPERFAMILY SSF55174 22 94 5.63E-17 T 14-10-2018 VS_II0916 7be4b30cb0d7301fb18407ee3ffc7269 182 Gene3D G3DSA:3.10.290.10 18 95 8.9E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_II0916 7be4b30cb0d7301fb18407ee3ffc7269 182 Pfam PF13275 S4 domain 31 93 9.5E-22 T 14-10-2018 VS_1620 d4be183f61fc5a44a7dc3a930756136f 523 Gene3D G3DSA:1.25.40.80 132 332 7.4E-96 T 14-10-2018 VS_1620 d4be183f61fc5a44a7dc3a930756136f 523 Gene3D G3DSA:1.10.579.10 336 456 2.5E-53 T 14-10-2018 VS_1620 d4be183f61fc5a44a7dc3a930756136f 523 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 223 3.9E-67 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VS_1620 d4be183f61fc5a44a7dc3a930756136f 523 SUPERFAMILY SSF48173 230 508 2.75E-59 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VS_1620 d4be183f61fc5a44a7dc3a930756136f 523 Gene3D G3DSA:1.10.10.1710 457 523 2.0E-25 T 14-10-2018 VS_1620 d4be183f61fc5a44a7dc3a930756136f 523 Gene3D G3DSA:3.40.50.620 8 230 7.4E-96 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_II1523 41920cd75b57e445726682d1c5a8413c 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 1.6E-49 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VS_II1523 41920cd75b57e445726682d1c5a8413c 219 Gene3D G3DSA:1.20.1440.100 17 90 1.3E-55 T 14-10-2018 VS_II1523 41920cd75b57e445726682d1c5a8413c 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 191 4.0E-22 T 14-10-2018 VS_II1523 41920cd75b57e445726682d1c5a8413c 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 2.0E-26 T 14-10-2018 VS_II1523 41920cd75b57e445726682d1c5a8413c 219 Gene3D G3DSA:3.40.50.1000 6 216 1.3E-55 T 14-10-2018 IPR023214 HAD superfamily VS_II1523 41920cd75b57e445726682d1c5a8413c 219 SUPERFAMILY SSF56784 4 214 2.1E-27 T 14-10-2018 IPR036412 HAD-like superfamily VS_2331 e654ae069b34daed76eb8200019c4348 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 1.7E-48 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 VS_II0423 65a65085bf0820b86e0d19b3d70a3386 279 Gene3D G3DSA:1.25.40.10 97 268 8.7E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0423 65a65085bf0820b86e0d19b3d70a3386 279 SMART SM00028 221 254 0.96 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0423 65a65085bf0820b86e0d19b3d70a3386 279 SMART SM00028 187 220 2.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0423 65a65085bf0820b86e0d19b3d70a3386 279 SUPERFAMILY SSF48452 173 254 1.9E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 7.0E-56 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 7.1E-132 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 81.902 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.3E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 Gene3D G3DSA:3.40.50.1370 151 319 1.8E-143 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 Gene3D G3DSA:3.40.50.1370 5 329 1.8E-143 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.7E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 5.7E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 5.7E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 5.7E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 5.7E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 SUPERFAMILY SSF53671 4 333 1.57E-97 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 4.3E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 4.3E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.3E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_2739 3c30b1aa4de4481b3f1729191c5eb63a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 4.3E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 SUPERFAMILY SSF53335 4 479 1.93E-123 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 262 268 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 171 185 1.7E-19 T 14-10-2018 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 310 1.7E-19 T 14-10-2018 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 147 163 1.7E-19 T 14-10-2018 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 259 271 1.7E-19 T 14-10-2018 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 Gene3D G3DSA:1.20.1260.30 1 149 6.6E-48 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 Gene3D G3DSA:3.40.50.150 150 467 3.3E-84 T 14-10-2018 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 Pfam PF02384 N-6 DNA Methylase 123 409 1.0E-84 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VS_1377 e9c2fdc7aafc45f0991fe89131010f4f 484 Pfam PF12161 HsdM N-terminal domain 6 109 1.2E-9 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VS_0437 a6ea402574a469f489d7419c1cb5c92e 196 SUPERFAMILY SSF53697 1 191 1.62E-56 T 14-10-2018 VS_0437 a6ea402574a469f489d7419c1cb5c92e 196 Gene3D G3DSA:3.40.50.10490 1 195 1.1E-72 T 14-10-2018 VS_0437 a6ea402574a469f489d7419c1cb5c92e 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.207 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VS_0437 a6ea402574a469f489d7419c1cb5c92e 196 Pfam PF13580 SIS domain 9 144 1.1E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_2196 59a0f6f93e2cd5466245d16e9737afd2 447 SUPERFAMILY SSF109604 25 444 5.5E-77 T 14-10-2018 VS_2196 59a0f6f93e2cd5466245d16e9737afd2 447 SMART SM00471 64 270 5.1E-9 T 14-10-2018 IPR003607 HD/PDEase domain VS_2196 59a0f6f93e2cd5466245d16e9737afd2 447 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 442 2.1E-123 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VS_2196 59a0f6f93e2cd5466245d16e9737afd2 447 Pfam PF13286 Phosphohydrolase-associated domain 348 439 2.1E-25 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain VS_2196 59a0f6f93e2cd5466245d16e9737afd2 447 Pfam PF01966 HD domain 68 150 2.3E-7 T 14-10-2018 IPR006674 HD domain VS_2196 59a0f6f93e2cd5466245d16e9737afd2 447 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 441 34.371 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.366 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.7E-94 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 9.2E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 SUPERFAMILY SSF81624 2 138 5.23E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 SMART SM00898 2 115 6.9E-54 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 SUPERFAMILY SSF46946 130 221 6.33E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 218 7.5E-27 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.9E-32 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 SUPERFAMILY SSF57716 217 268 9.98E-16 T 14-10-2018 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 Gene3D G3DSA:1.10.8.50 131 269 3.1E-46 T 14-10-2018 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 Gene3D G3DSA:3.20.190.10 2 127 2.7E-42 T 14-10-2018 IPR035937 MutM-like, N-terminal VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VS_0186 f66f46cf3d921bc2031cca630b2055c1 269 SMART SM01232 129 221 7.2E-42 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VS_1573 499e56f9d0ef6a9a8a22b5aff6cec9eb 89 SUPERFAMILY SSF101744 6 88 1.26E-23 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VS_1573 499e56f9d0ef6a9a8a22b5aff6cec9eb 89 Gene3D G3DSA:2.30.30.400 8 88 5.4E-17 T 14-10-2018 IPR038626 Rof-like superfamily VS_1573 499e56f9d0ef6a9a8a22b5aff6cec9eb 89 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 86 2.2E-29 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VS_1942 e42ea158a47d21f753fe83655faf146b 423 SMART SM00852 17 184 8.3E-28 T 14-10-2018 IPR001453 MoaB/Mog domain VS_1942 e42ea158a47d21f753fe83655faf146b 423 Gene3D G3DSA:3.40.980.10 13 184 2.2E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_1942 e42ea158a47d21f753fe83655faf146b 423 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 423 104.958 T 14-10-2018 IPR008135 Competence-induced protein CinA VS_1942 e42ea158a47d21f753fe83655faf146b 423 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 13 366 1.2E-76 T 14-10-2018 IPR008135 Competence-induced protein CinA VS_1942 e42ea158a47d21f753fe83655faf146b 423 Pfam PF00994 Probable molybdopterin binding domain 17 182 9.0E-30 T 14-10-2018 IPR001453 MoaB/Mog domain VS_1942 e42ea158a47d21f753fe83655faf146b 423 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 178 2.8E-25 T 14-10-2018 IPR001453 MoaB/Mog domain VS_1942 e42ea158a47d21f753fe83655faf146b 423 PIRSF PIRSF006728 13 404 2.3E-105 T 14-10-2018 IPR008135 Competence-induced protein CinA VS_1942 e42ea158a47d21f753fe83655faf146b 423 SUPERFAMILY SSF53218 13 216 6.28E-33 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VS_1942 e42ea158a47d21f753fe83655faf146b 423 SUPERFAMILY SSF142433 265 398 1.19E-5 T 14-10-2018 IPR036653 CinA-like, C-terminal VS_II1419 13f788e0d0f1d3e2ee4b5393564f7c35 346 Pfam PF01757 Acyltransferase family 13 331 9.3E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 SUPERFAMILY SSF52540 273 647 2.89E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Gene3D G3DSA:3.30.360.80 714 786 4.7E-30 T 14-10-2018 VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 1.0E-15 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Gene3D G3DSA:3.40.50.300 431 635 2.2E-45 T 14-10-2018 VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 SMART SM00487 150 342 5.4E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.9E-144 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 SMART SM00490 519 603 6.0E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Gene3D G3DSA:3.40.50.10810 150 430 3.3E-103 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Gene3D G3DSA:2.30.30.140 1 53 7.7E-24 T 14-10-2018 VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 SUPERFAMILY SSF52540 120 377 1.38E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Gene3D G3DSA:2.30.30.930 55 114 2.0E-26 T 14-10-2018 VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 3.7E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VS_0350 bd386d45a7ceee8a1b71b90d3595c551 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 28.93 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VS_0693 fbb311e6c2390702408173347454932d 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.7E-113 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VS_0693 fbb311e6c2390702408173347454932d 446 Pfam PF11973 NQRA C-terminal domain 261 310 3.9E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VS_0693 fbb311e6c2390702408173347454932d 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.337 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VS_0693 fbb311e6c2390702408173347454932d 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 2.2E-204 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VS_0243 65b6be1eb2e08df220e648aeffe31abe 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 5.2E-127 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VS_0243 65b6be1eb2e08df220e648aeffe31abe 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 3.5E-154 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like VS_0243 65b6be1eb2e08df220e648aeffe31abe 340 SUPERFAMILY SSF102114 102 320 1.57E-23 T 14-10-2018 VS_0243 65b6be1eb2e08df220e648aeffe31abe 340 Pfam PF04055 Radical SAM superfamily 117 241 8.7E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_0243 65b6be1eb2e08df220e648aeffe31abe 340 Gene3D G3DSA:3.20.20.70 51 334 2.1E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0243 65b6be1eb2e08df220e648aeffe31abe 340 PIRSF PIRSF004911 3 340 8.7E-115 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VS_0243 65b6be1eb2e08df220e648aeffe31abe 340 Pfam PF13394 4Fe-4S single cluster domain 116 197 9.3E-7 T 14-10-2018 VS_II0998 4a52113c622a5b7c931b330b709483ba 525 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 7.0E-25 T 14-10-2018 IPR010657 ImpA, N-terminal VS_II0998 4a52113c622a5b7c931b330b709483ba 525 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 496 8.4E-79 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VS_II0998 4a52113c622a5b7c931b330b709483ba 525 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 245 496 3.2E-70 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VS_II1286 6d85a8a717bd43fbbde0e0cca31f9946 348 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 63 298 8.9E-57 T 14-10-2018 VS_II1286 6d85a8a717bd43fbbde0e0cca31f9946 348 Gene3D G3DSA:3.40.190.10 64 284 1.3E-50 T 14-10-2018 VS_II1286 6d85a8a717bd43fbbde0e0cca31f9946 348 Gene3D G3DSA:3.40.190.10 146 253 1.3E-50 T 14-10-2018 VS_II1286 6d85a8a717bd43fbbde0e0cca31f9946 348 SUPERFAMILY SSF53850 58 308 6.11E-45 T 14-10-2018 VS_II1286 6d85a8a717bd43fbbde0e0cca31f9946 348 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 46 277 2.3E-57 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 VS_II0261 28c067f1a86d1acc1afd0e3219b1f282 395 Pfam PF17327 Acyl homoserine lactone synthase 18 392 1.3E-161 T 14-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VS_II0261 28c067f1a86d1acc1afd0e3219b1f282 395 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 184 391 8.0E-77 T 14-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VS_II0261 28c067f1a86d1acc1afd0e3219b1f282 395 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 16 159 3.0E-50 T 14-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VS_1566 d97380267edfb8ef109aeec1e7857949 154 Pfam PF13279 Thioesterase-like superfamily 16 125 2.2E-21 T 14-10-2018 VS_1566 d97380267edfb8ef109aeec1e7857949 154 Gene3D G3DSA:3.10.129.10 2 137 1.8E-37 T 14-10-2018 VS_1566 d97380267edfb8ef109aeec1e7857949 154 SUPERFAMILY SSF54637 7 136 3.09E-31 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2639 4780c8bc6970796435139302716b7f28 218 Gene3D G3DSA:3.30.70.260 125 196 7.0E-76 T 14-10-2018 VS_2639 4780c8bc6970796435139302716b7f28 218 SUPERFAMILY SSF100950 1 146 1.72E-46 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_2639 4780c8bc6970796435139302716b7f28 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 32.565 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VS_2639 4780c8bc6970796435139302716b7f28 218 Gene3D G3DSA:3.40.50.1360 7 207 7.0E-76 T 14-10-2018 VS_2639 4780c8bc6970796435139302716b7f28 218 SUPERFAMILY SSF75445 127 198 8.63E-23 T 14-10-2018 VS_2639 4780c8bc6970796435139302716b7f28 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 5.0E-66 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VS_2639 4780c8bc6970796435139302716b7f28 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 6.9E-55 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VS_0202 817da4277262e90d8a0f0d2d3257a755 212 Pfam PF13972 Bacterial transcriptional repressor 57 199 6.2E-42 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR VS_0202 817da4277262e90d8a0f0d2d3257a755 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 6.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0202 817da4277262e90d8a0f0d2d3257a755 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 6.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0202 817da4277262e90d8a0f0d2d3257a755 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 1.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0202 817da4277262e90d8a0f0d2d3257a755 212 SUPERFAMILY SSF46689 2 71 2.28E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0202 817da4277262e90d8a0f0d2d3257a755 212 Gene3D G3DSA:1.10.357.10 1 209 1.5E-64 T 14-10-2018 VS_2138 b2e3f5874624df4121034242e34a8730 520 Gene3D G3DSA:3.20.20.70 176 516 3.5E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2138 b2e3f5874624df4121034242e34a8730 520 Pfam PF09360 Iron-binding zinc finger CDGSH type 13 40 2.1E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VS_2138 b2e3f5874624df4121034242e34a8730 520 Pfam PF09360 Iron-binding zinc finger CDGSH type 57 77 3.2E-8 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VS_2138 b2e3f5874624df4121034242e34a8730 520 Gene3D G3DSA:3.40.5.90 1 79 2.4E-31 T 14-10-2018 VS_2138 b2e3f5874624df4121034242e34a8730 520 Pfam PF01645 Conserved region in glutamate synthase 172 483 9.3E-92 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VS_2138 b2e3f5874624df4121034242e34a8730 520 PIRSF PIRSF006429 12 520 1.5E-140 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein VS_2138 b2e3f5874624df4121034242e34a8730 520 PIRSF PIRSF500061 5 520 1.6E-148 T 14-10-2018 VS_2138 b2e3f5874624df4121034242e34a8730 520 SUPERFAMILY SSF51395 130 506 3.3E-97 T 14-10-2018 VS_2138 b2e3f5874624df4121034242e34a8730 520 SMART SM00704 47 82 6.2E-7 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VS_2138 b2e3f5874624df4121034242e34a8730 520 SMART SM00704 9 46 3.6E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VS_2052 8fdb3fefd4bab3ee91746ec309556138 264 SUPERFAMILY SSF47240 19 264 2.51E-73 T 14-10-2018 IPR009078 Ferritin-like superfamily VS_2052 8fdb3fefd4bab3ee91746ec309556138 264 Gene3D G3DSA:1.20.1260.10 15 99 3.2E-16 T 14-10-2018 IPR012347 Ferritin-like VS_2052 8fdb3fefd4bab3ee91746ec309556138 264 Gene3D G3DSA:1.20.1260.10 107 264 9.3E-54 T 14-10-2018 IPR012347 Ferritin-like VS_2052 8fdb3fefd4bab3ee91746ec309556138 264 PIRSF PIRSF020736 10 264 1.1E-88 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VS_2052 8fdb3fefd4bab3ee91746ec309556138 264 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 18 260 1.5E-105 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VS_0605 960da3d734aa1aebf24561485fba4e14 242 Gene3D G3DSA:3.40.1280.10 1 164 4.1E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_0605 960da3d734aa1aebf24561485fba4e14 242 SUPERFAMILY SSF75217 4 175 7.19E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_0605 960da3d734aa1aebf24561485fba4e14 242 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.7E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VS_0605 960da3d734aa1aebf24561485fba4e14 242 PIRSF PIRSF004808 1 242 7.3E-73 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VS_0605 960da3d734aa1aebf24561485fba4e14 242 Gene3D G3DSA:1.10.8.590 173 242 1.6E-27 T 14-10-2018 VS_0605 960da3d734aa1aebf24561485fba4e14 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 2.2E-82 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VS_II1328 3a6c25df30ddbc618dadfe67869e8a53 279 Pfam PF00756 Putative esterase 23 272 5.4E-59 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VS_II1328 3a6c25df30ddbc618dadfe67869e8a53 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 276 5.9E-120 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 VS_II1328 3a6c25df30ddbc618dadfe67869e8a53 279 SUPERFAMILY SSF53474 3 278 7.82E-90 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II1328 3a6c25df30ddbc618dadfe67869e8a53 279 Gene3D G3DSA:3.40.50.1820 3 279 3.9E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1994 064f9285aed154f1b153a74ebbe788c6 320 Gene3D G3DSA:1.10.3720.10 64 308 1.9E-23 T 14-10-2018 IPR035906 MetI-like superfamily VS_1994 064f9285aed154f1b153a74ebbe788c6 320 SUPERFAMILY SSF161098 70 298 2.13E-20 T 14-10-2018 IPR035906 MetI-like superfamily VS_1994 064f9285aed154f1b153a74ebbe788c6 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.6E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2934 fe3d1180359cca31da82279c6adfdb45 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 3.1E-35 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted VS_2934 fe3d1180359cca31da82279c6adfdb45 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.1E-35 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted VS_3155 9b7769642f3dfed6b80512af93985739 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.0E-50 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.3E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.3E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.3E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.3E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.3E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 Gene3D G3DSA:1.10.520.20 2 106 1.4E-35 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 6.7E-60 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.305 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3155 9b7769642f3dfed6b80512af93985739 177 SUPERFAMILY SSF47928 3 105 9.94E-28 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_1727 10041894a2022fcbf9428d14a6b07c89 133 SUPERFAMILY SSF55021 70 130 7.17E-19 T 14-10-2018 VS_1727 10041894a2022fcbf9428d14a6b07c89 133 Pfam PF13840 ACT domain 72 128 1.1E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain VS_1727 10041894a2022fcbf9428d14a6b07c89 133 SUPERFAMILY SSF55021 3 66 1.37E-16 T 14-10-2018 VS_1727 10041894a2022fcbf9428d14a6b07c89 133 Gene3D G3DSA:3.30.2130.10 1 132 1.4E-44 T 14-10-2018 VS_1727 10041894a2022fcbf9428d14a6b07c89 133 Pfam PF10000 ACT domain 3 70 1.1E-23 T 14-10-2018 IPR018717 Domain of unknown function DUF2241 VS_0450 c75ed90ecb8332a6e7fa6cb4eb71d758 353 Gene3D G3DSA:3.40.50.2000 8 160 4.3E-122 T 14-10-2018 VS_0450 c75ed90ecb8332a6e7fa6cb4eb71d758 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.823 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0450 c75ed90ecb8332a6e7fa6cb4eb71d758 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 5.4E-48 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0450 c75ed90ecb8332a6e7fa6cb4eb71d758 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 5.0E-35 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VS_0450 c75ed90ecb8332a6e7fa6cb4eb71d758 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.1E-118 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0450 c75ed90ecb8332a6e7fa6cb4eb71d758 353 SUPERFAMILY SSF53756 5 352 4.32E-126 T 14-10-2018 VS_0450 c75ed90ecb8332a6e7fa6cb4eb71d758 353 Gene3D G3DSA:3.40.50.2000 161 318 4.3E-122 T 14-10-2018 VS_0989 65092105c94f75267c864f62ba943827 157 SUPERFAMILY SSF54690 10 155 6.28E-55 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VS_0989 65092105c94f75267c864f62ba943827 157 Gene3D G3DSA:3.90.1170.40 6 155 4.4E-54 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VS_0989 65092105c94f75267c864f62ba943827 157 Pfam PF02391 MoaE protein 16 125 1.0E-36 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 Gene3D G3DSA:3.60.120.10 6 466 5.3E-168 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 155 9.8E-28 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 SUPERFAMILY SSF56322 15 465 1.57E-140 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 459 5.5E-117 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 Pfam PF00425 chorismate binding enzyme 204 457 8.9E-95 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 PRINTS PR00095 Anthranilate synthase component I signature 414 428 8.3E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 PRINTS PR00095 Anthranilate synthase component I signature 319 332 8.3E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 PRINTS PR00095 Anthranilate synthase component I signature 399 413 8.3E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1798 0bb4ae5a5605518a39df0ad95ae83b11 468 PRINTS PR00095 Anthranilate synthase component I signature 305 318 8.3E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_II0846 073d555aff4a4772d8dffd6886ab71e8 272 Pfam PF11060 Protein of unknown function (DUF2861) 21 271 1.7E-79 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 VS_1578 57008d2f1fed2bedaf407584d2fc0a31 127 Pfam PF12680 SnoaL-like domain 8 101 8.5E-10 T 14-10-2018 IPR037401 SnoaL-like domain VS_1578 57008d2f1fed2bedaf407584d2fc0a31 127 SUPERFAMILY SSF54427 1 122 5.02E-32 T 14-10-2018 IPR032710 NTF2-like domain superfamily VS_1578 57008d2f1fed2bedaf407584d2fc0a31 127 Gene3D G3DSA:3.10.450.50 1 127 4.3E-34 T 14-10-2018 VS_II0033 8697fb17b0a7943ab426695f500b6e47 179 Pfam PF00857 Isochorismatase family 7 155 5.0E-31 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VS_II0033 8697fb17b0a7943ab426695f500b6e47 179 SUPERFAMILY SSF52499 1 179 1.44E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VS_II0033 8697fb17b0a7943ab426695f500b6e47 179 Gene3D G3DSA:3.40.50.850 1 179 1.4E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VS_1836 9623edba92ddb6fcec2648ba61358ed7 87 PRINTS PR00160 Glutaredoxin signature 52 65 5.7E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_1836 9623edba92ddb6fcec2648ba61358ed7 87 PRINTS PR00160 Glutaredoxin signature 3 21 5.7E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_1836 9623edba92ddb6fcec2648ba61358ed7 87 PRINTS PR00160 Glutaredoxin signature 66 79 5.7E-10 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_1836 9623edba92ddb6fcec2648ba61358ed7 87 Gene3D G3DSA:3.40.30.10 1 85 5.9E-24 T 14-10-2018 VS_1836 9623edba92ddb6fcec2648ba61358ed7 87 SUPERFAMILY SSF52833 3 82 5.57E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1836 9623edba92ddb6fcec2648ba61358ed7 87 Pfam PF00462 Glutaredoxin 3 69 1.5E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VS_1836 9623edba92ddb6fcec2648ba61358ed7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.3E-47 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VS_1526 779ee7c5990bc99bdf07e3490731ec33 134 SUPERFAMILY SSF47226 20 125 1.01E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_1526 779ee7c5990bc99bdf07e3490731ec33 134 Pfam PF01627 Hpt domain 42 117 7.8E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_1526 779ee7c5990bc99bdf07e3490731ec33 134 Gene3D G3DSA:1.20.120.160 12 127 1.2E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_2263 9af19dcccd148f8ca6b27df8b9f09405 528 SUPERFAMILY SSF51735 387 517 4.11E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2263 9af19dcccd148f8ca6b27df8b9f09405 528 Gene3D G3DSA:1.20.1530.20 2 362 2.3E-45 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VS_2263 9af19dcccd148f8ca6b27df8b9f09405 528 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 8.3E-35 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VS_2263 9af19dcccd148f8ca6b27df8b9f09405 528 Gene3D G3DSA:3.40.50.720 380 528 2.2E-33 T 14-10-2018 VS_2263 9af19dcccd148f8ca6b27df8b9f09405 528 Pfam PF02254 TrkA-N domain 388 504 3.1E-19 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VS_1923 935a7dbae71a61e10633037f26c999db 419 Pfam PF09375 Imelysin 39 397 5.1E-96 T 14-10-2018 IPR018976 Imelysin-like domain VS_1923 935a7dbae71a61e10633037f26c999db 419 Gene3D G3DSA:1.20.1420.20 11 402 4.5E-83 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VS_II0933 8254a1dde19283aae46edbb7be87bfae 340 Gene3D G3DSA:1.10.3720.10 127 337 1.2E-16 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0933 8254a1dde19283aae46edbb7be87bfae 340 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 49 1.5E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VS_II0933 8254a1dde19283aae46edbb7be87bfae 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 337 4.2E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0933 8254a1dde19283aae46edbb7be87bfae 340 SUPERFAMILY SSF161098 134 321 1.83E-19 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0160 b0ba277884dd501da220666012fbb94e 275 Gene3D G3DSA:3.40.50.1820 3 275 1.7E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0160 b0ba277884dd501da220666012fbb94e 275 Pfam PF00756 Putative esterase 15 266 6.1E-25 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VS_II0160 b0ba277884dd501da220666012fbb94e 275 SUPERFAMILY SSF53474 9 274 5.9E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0177 1f1400513f52bb5f63d492fe9e8ff818 354 Gene3D G3DSA:1.10.40.50 261 332 1.1E-21 T 14-10-2018 VS_II0177 1f1400513f52bb5f63d492fe9e8ff818 354 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 35 322 30.774 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VS_II0177 1f1400513f52bb5f63d492fe9e8ff818 354 Pfam PF03193 RsgA GTPase 85 258 5.8E-48 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VS_II0177 1f1400513f52bb5f63d492fe9e8ff818 354 SUPERFAMILY SSF52540 103 319 7.19E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0177 1f1400513f52bb5f63d492fe9e8ff818 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 69 315 1.2E-50 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VS_II0177 1f1400513f52bb5f63d492fe9e8ff818 354 Gene3D G3DSA:3.40.50.300 87 258 1.9E-42 T 14-10-2018 VS_2441 4282b035fffcdc81287392c946772701 422 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 16 59 9.1E-11 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VS_0402 c49eccd75d999186ad02718b0553b3fc 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 8.6E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 8.6E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 8.6E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 Pfam PF12697 Alpha/beta hydrolase family 22 258 2.3E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 SUPERFAMILY SSF53474 1 267 2.55E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_0402 c49eccd75d999186ad02718b0553b3fc 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 4.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_0402 c49eccd75d999186ad02718b0553b3fc 271 Gene3D G3DSA:3.40.50.1820 2 270 1.1E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_0688 7ea1354d40cdf8749020863583556d07 452 Pfam PF07690 Major Facilitator Superfamily 25 398 5.1E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_0688 7ea1354d40cdf8749020863583556d07 452 SUPERFAMILY SSF103473 11 437 9.42E-34 T 14-10-2018 IPR036259 MFS transporter superfamily VS_0688 7ea1354d40cdf8749020863583556d07 452 Gene3D G3DSA:1.20.1250.20 10 223 2.1E-11 T 14-10-2018 VS_0688 7ea1354d40cdf8749020863583556d07 452 Gene3D G3DSA:1.20.1250.20 243 442 2.8E-8 T 14-10-2018 VS_1922 da867452dc959b479c0ee4c3240b8a11 483 Gene3D G3DSA:1.10.760.10 341 483 5.1E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1922 da867452dc959b479c0ee4c3240b8a11 483 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 42 483 2.0E-144 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VS_1922 da867452dc959b479c0ee4c3240b8a11 483 SUPERFAMILY SSF46626 342 483 1.27E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1922 da867452dc959b479c0ee4c3240b8a11 483 PIRSF PIRSF028099 6 483 9.2E-184 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VS_2275 d9e72b98fadd7c96a097aa01c0682c3d 116 SMART SM00938 6 104 3.0E-6 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2275 d9e72b98fadd7c96a097aa01c0682c3d 116 Gene3D G3DSA:3.30.70.120 1 104 2.9E-14 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VS_2275 d9e72b98fadd7c96a097aa01c0682c3d 116 SUPERFAMILY SSF54913 1 102 2.7E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VS_0096 752b2714494cba112777efdc9e99fe7c 297 SUPERFAMILY SSF103481 189 287 8.76E-10 T 14-10-2018 VS_0096 752b2714494cba112777efdc9e99fe7c 297 Pfam PF00892 EamA-like transporter family 9 141 3.0E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_0096 752b2714494cba112777efdc9e99fe7c 297 Pfam PF00892 EamA-like transporter family 155 286 2.9E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_0096 752b2714494cba112777efdc9e99fe7c 297 SUPERFAMILY SSF103481 42 144 1.05E-12 T 14-10-2018 VS_1114 e39838d1817689fb8eb4f93a360db9f9 147 TIGRFAM TIGR02801 tolR: protein TolR 12 144 7.5E-38 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VS_1114 e39838d1817689fb8eb4f93a360db9f9 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 8.4E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VS_1114 e39838d1817689fb8eb4f93a360db9f9 147 Gene3D G3DSA:3.30.420.270 64 137 1.8E-18 T 14-10-2018 VS_1114 e39838d1817689fb8eb4f93a360db9f9 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.261 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VS_1502 969d790364b770459af36f1fefd4245c 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 187 9.7E-69 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VS_1502 969d790364b770459af36f1fefd4245c 194 Gene3D G3DSA:3.90.550.10 4 192 2.8E-55 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1502 969d790364b770459af36f1fefd4245c 194 SUPERFAMILY SSF53448 10 187 1.77E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1502 969d790364b770459af36f1fefd4245c 194 Pfam PF12804 MobA-like NTP transferase domain 10 158 5.9E-35 T 14-10-2018 IPR025877 MobA-like NTP transferase VS_1502 969d790364b770459af36f1fefd4245c 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.101 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VS_II1199 28e142177d4f01b774a9aa2cfd66e470 386 Pfam PF07690 Major Facilitator Superfamily 12 343 1.5E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1199 28e142177d4f01b774a9aa2cfd66e470 386 SUPERFAMILY SSF103473 2 374 9.16E-57 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II1199 28e142177d4f01b774a9aa2cfd66e470 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 364 1.0E-72 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VS_II1199 28e142177d4f01b774a9aa2cfd66e470 386 Gene3D G3DSA:1.20.1720.10 1 375 2.6E-88 T 14-10-2018 VS_0496 a9817be0e1b897d4c2216479850c5aff 133 SUPERFAMILY SSF46689 9 109 3.23E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2324 14d0d5442660efa5f3c5b075f1a5f5c9 255 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 21 238 2.9E-82 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2324 14d0d5442660efa5f3c5b075f1a5f5c9 255 SUPERFAMILY SSF53098 20 201 4.4E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2324 14d0d5442660efa5f3c5b075f1a5f5c9 255 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 22 255 3.6E-100 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_2324 14d0d5442660efa5f3c5b075f1a5f5c9 255 Gene3D G3DSA:3.30.420.10 15 205 5.1E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2324 14d0d5442660efa5f3c5b075f1a5f5c9 255 SMART SM00479 22 200 1.3E-49 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_2324 14d0d5442660efa5f3c5b075f1a5f5c9 255 Pfam PF00929 Exonuclease 24 191 3.6E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_2551 0c1d05988dfbda49dba2c88988f89b14 88 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 81 1.3E-28 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VS_2551 0c1d05988dfbda49dba2c88988f89b14 88 Gene3D G3DSA:3.40.50.300 1 87 1.3E-28 T 14-10-2018 VS_2551 0c1d05988dfbda49dba2c88988f89b14 88 SUPERFAMILY SSF52540 1 80 4.32E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2551 0c1d05988dfbda49dba2c88988f89b14 88 Pfam PF01121 Dephospho-CoA kinase 3 81 3.9E-30 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VS_0779 cba99483ad69ac22ba51727868826e77 515 SUPERFAMILY SSF48557 6 511 6.04E-173 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VS_0779 cba99483ad69ac22ba51727868826e77 515 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VS_0779 cba99483ad69ac22ba51727868826e77 515 Gene3D G3DSA:1.20.200.10 204 510 1.2E-103 T 14-10-2018 VS_0779 cba99483ad69ac22ba51727868826e77 515 Gene3D G3DSA:1.10.275.10 10 203 6.0E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VS_0779 cba99483ad69ac22ba51727868826e77 515 Pfam PF00221 Aromatic amino acid lyase 16 475 5.0E-163 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VS_II0509 c951a5f2d79305b302645abc8d8cbfb9 548 Gene3D G3DSA:1.20.1560.10 6 310 9.6E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0509 c951a5f2d79305b302645abc8d8cbfb9 548 SUPERFAMILY SSF90123 7 303 2.75E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0509 c951a5f2d79305b302645abc8d8cbfb9 548 SUPERFAMILY SSF52540 328 535 5.83E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0509 c951a5f2d79305b302645abc8d8cbfb9 548 Pfam PF00664 ABC transporter transmembrane region 15 274 1.3E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0509 c951a5f2d79305b302645abc8d8cbfb9 548 Gene3D G3DSA:3.40.50.300 313 546 2.6E-23 T 14-10-2018 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 SMART SM00986 49 210 7.7E-42 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 SMART SM00987 49 210 7.7E-42 T 14-10-2018 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 Gene3D G3DSA:3.40.470.10 1 223 9.3E-102 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 Pfam PF03167 Uracil DNA glycosylase superfamily 54 208 6.9E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 213 1.0E-86 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 39.91 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 SUPERFAMILY SSF52141 4 222 6.87E-93 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_0501 8cd5e9fa3b8aa96efe79480f8bf9c677 224 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PIRSF PIRSF000350 1 471 7.7E-59 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 331 5.6E-41 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 Gene3D G3DSA:3.50.50.60 147 273 4.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 463 9.0E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 Gene3D G3DSA:3.30.390.30 351 474 1.8E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.5E-20 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.5E-20 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 2.5E-20 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.5E-20 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.5E-20 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 Gene3D G3DSA:1.10.287.990 37 107 4.0E-94 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 SUPERFAMILY SSF51905 1 370 9.48E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 3.6E-39 T 14-10-2018 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 SUPERFAMILY SSF55424 354 472 2.75E-24 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VS_2881 7f454cc53ed307ab64705a5f75e80e38 488 Gene3D G3DSA:3.50.50.60 7 334 4.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0965 d98ba3ac4258056e6b25d2b791ff34fc 458 Pfam PF00072 Response regulator receiver domain 21 136 2.7E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0965 d98ba3ac4258056e6b25d2b791ff34fc 458 Gene3D G3DSA:3.40.50.2300 15 149 5.1E-21 T 14-10-2018 VS_0965 d98ba3ac4258056e6b25d2b791ff34fc 458 SUPERFAMILY SSF52172 21 152 1.17E-22 T 14-10-2018 IPR011006 CheY-like superfamily VS_0965 d98ba3ac4258056e6b25d2b791ff34fc 458 SUPERFAMILY SSF48452 177 414 3.25E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0965 d98ba3ac4258056e6b25d2b791ff34fc 458 SMART SM00448 18 136 1.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2780 dfddfdd4a61f07a00851c0b94dc9071b 96 Pfam PF10795 Protein of unknown function (DUF2607) 6 93 3.8E-34 T 14-10-2018 IPR019731 Protein of unknown function DUF2607 VS_II0559 b9b0b51c07723eb346765216ad5b8a38 208 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VS_II0559 b9b0b51c07723eb346765216ad5b8a38 208 Pfam PF13462 Thioredoxin 49 201 7.3E-7 T 14-10-2018 IPR012336 Thioredoxin-like fold VS_II0559 b9b0b51c07723eb346765216ad5b8a38 208 Gene3D G3DSA:3.40.30.10 24 207 4.9E-37 T 14-10-2018 VS_II0559 b9b0b51c07723eb346765216ad5b8a38 208 SUPERFAMILY SSF52833 48 205 1.3E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0455 b0cc4d54192dc043aef3bb4fcc30a584 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 1.2E-141 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VS_0455 b0cc4d54192dc043aef3bb4fcc30a584 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.052 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VS_0455 b0cc4d54192dc043aef3bb4fcc30a584 305 Gene3D G3DSA:3.30.1700.10 129 305 2.2E-69 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VS_0455 b0cc4d54192dc043aef3bb4fcc30a584 305 SUPERFAMILY SSF54211 3 125 5.76E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0455 b0cc4d54192dc043aef3bb4fcc30a584 305 SUPERFAMILY SSF54211 134 278 1.06E-51 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_0455 b0cc4d54192dc043aef3bb4fcc30a584 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.6E-107 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VS_0455 b0cc4d54192dc043aef3bb4fcc30a584 305 Gene3D G3DSA:3.30.230.20 1 128 1.1E-51 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VS_1626 48062fbed9298874a8ee54934c0bbc72 417 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 283 380 4.0E-27 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VS_1626 48062fbed9298874a8ee54934c0bbc72 417 SUPERFAMILY SSF56300 1 343 3.44E-57 T 14-10-2018 VS_1626 48062fbed9298874a8ee54934c0bbc72 417 Pfam PF00149 Calcineurin-like phosphoesterase 1 233 1.1E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VS_1626 48062fbed9298874a8ee54934c0bbc72 417 Gene3D G3DSA:3.30.160.720 284 347 4.0E-24 T 14-10-2018 VS_1626 48062fbed9298874a8ee54934c0bbc72 417 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 261 1.4E-70 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 VS_1626 48062fbed9298874a8ee54934c0bbc72 417 Gene3D G3DSA:3.60.21.10 1 282 3.5E-86 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 SUPERFAMILY SSF46689 346 444 1.25E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 Pfam PF00158 Sigma-54 interaction domain 134 299 2.0E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 Gene3D G3DSA:1.10.8.60 305 385 3.8E-23 T 14-10-2018 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 Pfam PF02954 Bacterial regulatory protein, Fis family 404 442 5.5E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 SUPERFAMILY SSF52172 2 177 4.84E-39 T 14-10-2018 IPR011006 CheY-like superfamily VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 SUPERFAMILY SSF52540 133 376 6.52E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 SMART SM00382 153 296 4.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 Gene3D G3DSA:1.10.10.60 399 442 9.6E-8 T 14-10-2018 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 SMART SM00448 1 108 3.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 Gene3D G3DSA:3.40.50.2300 1 117 2.6E-29 T 14-10-2018 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 Gene3D G3DSA:3.40.50.300 119 304 2.4E-65 T 14-10-2018 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 Pfam PF00072 Response regulator receiver domain 2 108 3.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0982 94467d8239bc3a2080fdbc6ffe8cac3a 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VS_1113 8d3eee22aa58369b34374f73f8999eb9 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.8E-92 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VS_1113 8d3eee22aa58369b34374f73f8999eb9 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 44.053 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VS_1113 8d3eee22aa58369b34374f73f8999eb9 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 1.1E-42 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VS_0620 5a667ac80ed3125f020246d493c9ec97 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 1.0E-157 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VS_0620 5a667ac80ed3125f020246d493c9ec97 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.447 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VS_0620 5a667ac80ed3125f020246d493c9ec97 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.2E-45 T 14-10-2018 VS_0620 5a667ac80ed3125f020246d493c9ec97 422 Gene3D G3DSA:3.30.930.10 2 323 1.8E-118 T 14-10-2018 VS_0620 5a667ac80ed3125f020246d493c9ec97 422 PIRSF PIRSF001549 2 421 6.2E-124 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VS_0620 5a667ac80ed3125f020246d493c9ec97 422 SUPERFAMILY SSF55681 5 320 1.21E-102 T 14-10-2018 VS_0620 5a667ac80ed3125f020246d493c9ec97 422 Gene3D G3DSA:3.40.50.800 326 421 2.4E-25 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VS_0620 5a667ac80ed3125f020246d493c9ec97 422 Pfam PF03129 Anticodon binding domain 344 420 1.1E-9 T 14-10-2018 IPR004154 Anticodon-binding VS_0620 5a667ac80ed3125f020246d493c9ec97 422 SUPERFAMILY SSF52954 327 421 1.8E-25 T 14-10-2018 VS_II0825 46956f1934006c106ef043a6eeda6694 117 Gene3D G3DSA:1.10.10.60 19 101 4.7E-10 T 14-10-2018 VS_II0825 46956f1934006c106ef043a6eeda6694 117 Pfam PF01527 Transposase 13 94 9.5E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VS_II0825 46956f1934006c106ef043a6eeda6694 117 SUPERFAMILY SSF46689 14 110 1.24E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1874 46956f1934006c106ef043a6eeda6694 117 Gene3D G3DSA:1.10.10.60 19 101 4.7E-10 T 14-10-2018 VS_1874 46956f1934006c106ef043a6eeda6694 117 Pfam PF01527 Transposase 13 94 9.5E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VS_1874 46956f1934006c106ef043a6eeda6694 117 SUPERFAMILY SSF46689 14 110 1.24E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0255 3eecca02761b26ce6eefd25b8da4096f 293 SUPERFAMILY SSF103481 39 145 6.54E-8 T 14-10-2018 VS_2003 f33159196c358856703758c9cc072499 820 SUPERFAMILY SSF50692 669 817 4.52E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VS_2003 f33159196c358856703758c9cc072499 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 29 3.5E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VS_2003 f33159196c358856703758c9cc072499 820 Pfam PF00384 Molybdopterin oxidoreductase 87 561 1.9E-80 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_2003 f33159196c358856703758c9cc072499 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 3.8E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VS_2003 f33159196c358856703758c9cc072499 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 14-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VS_2003 f33159196c358856703758c9cc072499 820 Gene3D G3DSA:3.90.55.10 82 615 1.2E-235 T 14-10-2018 VS_2003 f33159196c358856703758c9cc072499 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VS_2003 f33159196c358856703758c9cc072499 820 Gene3D G3DSA:3.40.50.740 87 569 1.2E-235 T 14-10-2018 VS_2003 f33159196c358856703758c9cc072499 820 Gene3D G3DSA:2.40.40.20 649 813 1.8E-47 T 14-10-2018 VS_2003 f33159196c358856703758c9cc072499 820 SUPERFAMILY SSF53706 45 660 2.22E-164 T 14-10-2018 VS_2003 f33159196c358856703758c9cc072499 820 Gene3D G3DSA:3.40.228.10 179 641 1.2E-235 T 14-10-2018 VS_1161 b86f0778ad6b02a268c9da3825ac85f9 205 Gene3D G3DSA:1.20.120.1760 3 200 7.4E-20 T 14-10-2018 VS_1161 b86f0778ad6b02a268c9da3825ac85f9 205 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VS_1161 b86f0778ad6b02a268c9da3825ac85f9 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 7.1E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VS_2357 f88393da8c3094b141d1a88ced5fccb4 252 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2357 f88393da8c3094b141d1a88ced5fccb4 252 Pfam PF00849 RNA pseudouridylate synthase 14 173 1.6E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2357 f88393da8c3094b141d1a88ced5fccb4 252 Gene3D G3DSA:3.30.2350.10 5 239 4.6E-59 T 14-10-2018 VS_2357 f88393da8c3094b141d1a88ced5fccb4 252 SUPERFAMILY SSF55120 5 242 5.44E-63 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_II0819 be3b05ce63bf6ca4cbae207a6f454815 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 39.995 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VS_II0819 be3b05ce63bf6ca4cbae207a6f454815 126 SUPERFAMILY SSF51230 3 125 2.09E-43 T 14-10-2018 IPR011053 Single hybrid motif VS_II0819 be3b05ce63bf6ca4cbae207a6f454815 126 Pfam PF01597 Glycine cleavage H-protein 5 125 2.1E-49 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VS_II0819 be3b05ce63bf6ca4cbae207a6f454815 126 Gene3D G3DSA:2.40.50.100 1 126 3.2E-49 T 14-10-2018 VS_II0819 be3b05ce63bf6ca4cbae207a6f454815 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.9E-50 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VS_2590 0dedf10533b5ad19b132af18f042597e 414 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 143 160 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VS_2590 0dedf10533b5ad19b132af18f042597e 414 PRINTS PR00181 Maltose binding protein signature 245 264 2.7E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_2590 0dedf10533b5ad19b132af18f042597e 414 PRINTS PR00181 Maltose binding protein signature 369 388 2.7E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_2590 0dedf10533b5ad19b132af18f042597e 414 PRINTS PR00181 Maltose binding protein signature 140 159 2.7E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_2590 0dedf10533b5ad19b132af18f042597e 414 PRINTS PR00181 Maltose binding protein signature 161 180 2.7E-7 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_2590 0dedf10533b5ad19b132af18f042597e 414 Gene3D G3DSA:3.40.190.10 53 369 4.7E-86 T 14-10-2018 VS_2590 0dedf10533b5ad19b132af18f042597e 414 Pfam PF13416 Bacterial extracellular solute-binding protein 55 352 2.1E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_2590 0dedf10533b5ad19b132af18f042597e 414 Gene3D G3DSA:3.40.190.10 149 392 4.7E-86 T 14-10-2018 VS_2590 0dedf10533b5ad19b132af18f042597e 414 SUPERFAMILY SSF53850 39 407 1.38E-65 T 14-10-2018 VS_0369 179c4ba0502030d64b15db6633e734ac 126 SUPERFAMILY SSF110069 5 126 6.8E-46 T 14-10-2018 IPR036767 ApaG domain superfamily VS_0369 179c4ba0502030d64b15db6633e734ac 126 Gene3D G3DSA:2.60.40.1470 1 126 2.6E-44 T 14-10-2018 IPR036767 ApaG domain superfamily VS_0369 179c4ba0502030d64b15db6633e734ac 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 30.322 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG VS_0369 179c4ba0502030d64b15db6633e734ac 126 Pfam PF04379 ApaG domain 18 103 2.3E-33 T 14-10-2018 IPR007474 ApaG domain VS_2354 380e3f5de0b2dacdc759362bdce9b61f 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 279 1.9E-81 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VS_2354 380e3f5de0b2dacdc759362bdce9b61f 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VS_2354 380e3f5de0b2dacdc759362bdce9b61f 292 Gene3D G3DSA:3.90.230.10 1 290 5.1E-102 T 14-10-2018 VS_2354 380e3f5de0b2dacdc759362bdce9b61f 292 SUPERFAMILY SSF55920 4 282 8.51E-80 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VS_2354 380e3f5de0b2dacdc759362bdce9b61f 292 Pfam PF00557 Metallopeptidase family M24 12 271 7.0E-46 T 14-10-2018 IPR000994 Peptidase M24 VS_2354 380e3f5de0b2dacdc759362bdce9b61f 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 39.58 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VS_2395 517aaeb725c4d374dafae9a3763fad78 676 SUPERFAMILY SSF56935 21 676 7.33E-88 T 14-10-2018 VS_2395 517aaeb725c4d374dafae9a3763fad78 676 Pfam PF00593 TonB dependent receptor 234 675 4.3E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_2395 517aaeb725c4d374dafae9a3763fad78 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 136 3.8E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_2395 517aaeb725c4d374dafae9a3763fad78 676 Gene3D G3DSA:2.170.130.10 35 142 5.6E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_2395 517aaeb725c4d374dafae9a3763fad78 676 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 659 676 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VS_2395 517aaeb725c4d374dafae9a3763fad78 676 Gene3D G3DSA:2.40.170.20 144 676 1.1E-77 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_2864 c70e5d6db9d9ee2befdb2919f767cecb 867 Pfam PF00932 Lamin Tail Domain 23 133 1.8E-15 T 14-10-2018 IPR001322 Lamin tail domain VS_2864 c70e5d6db9d9ee2befdb2919f767cecb 867 SUPERFAMILY SSF74853 22 131 7.59E-6 T 14-10-2018 IPR036415 Lamin tail domain superfamily VS_2864 c70e5d6db9d9ee2befdb2919f767cecb 867 SUPERFAMILY SSF56219 474 844 2.45E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_II1323 69d538b728ae1102a7818a12be0725bd 474 SUPERFAMILY SSF52794 380 472 4.19E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II1323 69d538b728ae1102a7818a12be0725bd 474 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 21 351 2.4E-76 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VS_II1323 69d538b728ae1102a7818a12be0725bd 474 Gene3D G3DSA:3.40.50.2300 379 474 3.0E-34 T 14-10-2018 VS_II1323 69d538b728ae1102a7818a12be0725bd 474 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 382 466 4.0E-33 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VS_II1323 69d538b728ae1102a7818a12be0725bd 474 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 383 469 7.1E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_1973 9ebf7fcc37ef7e72db8fd438cf94b1b0 468 SUPERFAMILY SSF141322 395 459 1.44E-11 T 14-10-2018 VS_1973 9ebf7fcc37ef7e72db8fd438cf94b1b0 468 Gene3D G3DSA:2.40.50.140 394 466 6.4E-13 T 14-10-2018 VS_1973 9ebf7fcc37ef7e72db8fd438cf94b1b0 468 SUPERFAMILY SSF52096 3 222 1.55E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_1973 9ebf7fcc37ef7e72db8fd438cf94b1b0 468 Pfam PF01957 NfeD-like C-terminal, partner-binding 322 457 5.6E-34 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain VS_0790 db3f49a710264008513338a2de23a76a 413 SUPERFAMILY SSF51905 6 391 2.33E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0790 db3f49a710264008513338a2de23a76a 413 Pfam PF01494 FAD binding domain 6 173 3.0E-15 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VS_0790 db3f49a710264008513338a2de23a76a 413 Gene3D G3DSA:3.50.50.60 2 413 1.2E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0312 2dc876d3bed2781b5a913198171b44b7 153 SUPERFAMILY SSF55804 5 152 1.01E-28 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II0312 2dc876d3bed2781b5a913198171b44b7 153 Gene3D G3DSA:3.40.930.10 5 153 3.9E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II0312 2dc876d3bed2781b5a913198171b44b7 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 20 152 3.0E-25 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II0312 2dc876d3bed2781b5a913198171b44b7 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_2398 412a405f5e2799fdf3752e6ddfe54c1c 214 Gene3D G3DSA:3.40.50.1820 20 209 7.7E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2398 412a405f5e2799fdf3752e6ddfe54c1c 214 Pfam PF00561 alpha/beta hydrolase fold 22 128 8.5E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2398 412a405f5e2799fdf3752e6ddfe54c1c 214 SUPERFAMILY SSF53474 15 211 2.77E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II1279 126106839538589ba398506368a7802a 406 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_II1279 126106839538589ba398506368a7802a 406 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.7E-149 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_II1279 126106839538589ba398506368a7802a 406 Gene3D G3DSA:2.160.10.10 282 404 4.7E-34 T 14-10-2018 VS_II1279 126106839538589ba398506368a7802a 406 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 48.967 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_II1279 126106839538589ba398506368a7802a 406 SUPERFAMILY SSF53448 4 358 4.46E-76 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_II1279 126106839538589ba398506368a7802a 406 Gene3D G3DSA:3.90.550.10 1 281 5.6E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_II1279 126106839538589ba398506368a7802a 406 SUPERFAMILY SSF51161 312 395 9.09E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_II1279 126106839538589ba398506368a7802a 406 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_II1279 126106839538589ba398506368a7802a 406 Pfam PF00483 Nucleotidyl transferase 6 272 2.3E-67 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VS_II1279 126106839538589ba398506368a7802a 406 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 1.8E-5 T 14-10-2018 VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 1.8E-5 T 14-10-2018 VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 1.8E-5 T 14-10-2018 VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 Gene3D G3DSA:3.30.1330.60 80 222 3.2E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 SUPERFAMILY SSF103088 106 221 2.35E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 Pfam PF00691 OmpA family 118 212 1.5E-21 T 14-10-2018 IPR006665 OmpA-like domain VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 Pfam PF13488 Glycine zipper 38 86 1.4E-12 T 14-10-2018 IPR039567 Glycine zipper domain VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 PRINTS PR01021 OMPA domain signature 118 140 5.1E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 PRINTS PR01021 OMPA domain signature 148 163 5.1E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1209 ef965625fe121e8a4250bcbd993e8e2e 222 PRINTS PR01021 OMPA domain signature 163 179 5.1E-11 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_0130 e9c4425a408219c5e3f8818491a19daa 617 Pfam PF05170 AsmA family 3 583 2.6E-94 T 14-10-2018 IPR007844 AsmA VS_1893 2c4ef3f4c5c4a443c6491b082fa468f9 139 Pfam PF11948 Protein of unknown function (DUF3465) 18 139 5.1E-61 T 14-10-2018 IPR021856 Protein of unknown function DUF3465 VS_0393 fc48b591832fb1063a1644b59d4895ed 256 SMART SM00420 9 61 3.0E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_0393 fc48b591832fb1063a1644b59d4895ed 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VS_0393 fc48b591832fb1063a1644b59d4895ed 256 SMART SM01134 73 234 4.9E-56 T 14-10-2018 VS_0393 fc48b591832fb1063a1644b59d4895ed 256 SUPERFAMILY SSF100950 78 233 1.12E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_0393 fc48b591832fb1063a1644b59d4895ed 256 Pfam PF00455 DeoR C terminal sensor domain 77 233 3.1E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VS_0393 fc48b591832fb1063a1644b59d4895ed 256 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 2.0E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_0393 fc48b591832fb1063a1644b59d4895ed 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_0393 fc48b591832fb1063a1644b59d4895ed 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VS_0393 fc48b591832fb1063a1644b59d4895ed 256 SUPERFAMILY SSF46785 4 63 1.4E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0393 fc48b591832fb1063a1644b59d4895ed 256 Gene3D G3DSA:1.10.10.10 1 56 1.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0835 3f313687a9aa205c25cfad54632619a6 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 2.3E-57 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VS_0835 3f313687a9aa205c25cfad54632619a6 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 4.0E-75 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VS_0835 3f313687a9aa205c25cfad54632619a6 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VS_0835 3f313687a9aa205c25cfad54632619a6 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VS_0835 3f313687a9aa205c25cfad54632619a6 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VS_0835 3f313687a9aa205c25cfad54632619a6 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.7E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VS_1524 b2025e3a7208c625d65abcda2c6a58e4 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 278 4.2E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1524 b2025e3a7208c625d65abcda2c6a58e4 299 SUPERFAMILY SSF161098 99 281 1.18E-38 T 14-10-2018 IPR035906 MetI-like superfamily VS_1524 b2025e3a7208c625d65abcda2c6a58e4 299 Gene3D G3DSA:1.10.3720.10 95 288 7.2E-35 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 Pfam PF00691 OmpA family 232 327 7.2E-24 T 14-10-2018 IPR006665 OmpA-like domain VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 SUPERFAMILY SSF56925 26 184 1.23E-30 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 SUPERFAMILY SSF103088 212 333 1.31E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 Pfam PF01389 OmpA-like transmembrane domain 24 184 3.4E-24 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 Gene3D G3DSA:2.40.160.20 9 203 2.1E-34 T 14-10-2018 VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 PRINTS PR01021 OMPA domain signature 278 294 1.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 PRINTS PR01021 OMPA domain signature 263 278 1.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 PRINTS PR01021 OMPA domain signature 233 255 1.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II0395 5219d33618055f71b398d1d0715eeb1e 353 Gene3D G3DSA:3.30.1330.60 204 342 2.9E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 SUPERFAMILY SSF55957 374 465 4.06E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 2.1E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 7.1E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 2.1E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Gene3D G3DSA:3.40.120.10 172 365 2.7E-58 T 14-10-2018 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Gene3D G3DSA:3.30.310.50 370 469 9.9E-17 T 14-10-2018 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Gene3D G3DSA:3.40.120.10 263 369 2.7E-58 T 14-10-2018 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 SUPERFAMILY SSF53738 250 379 1.26E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 SUPERFAMILY SSF53738 2 187 7.46E-42 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 3.2E-25 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 Gene3D G3DSA:3.40.120.10 1 171 1.6E-46 T 14-10-2018 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 1.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 1.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_2515 72a5dd77774dfc54ac5c0099b0bd0638 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 1.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VS_II0815 c5956d57a6734804e22a3a619a319760 361 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 91 96 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VS_II0815 c5956d57a6734804e22a3a619a319760 361 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 248 259 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VS_II0815 c5956d57a6734804e22a3a619a319760 361 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 145 159 1.8E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VS_II0815 c5956d57a6734804e22a3a619a319760 361 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 81 96 1.8E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VS_II0815 c5956d57a6734804e22a3a619a319760 361 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 247 259 1.8E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VS_II0815 c5956d57a6734804e22a3a619a319760 361 SMART SM00020 45 299 1.2E-35 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VS_II0815 c5956d57a6734804e22a3a619a319760 361 Gene3D G3DSA:2.40.10.10 39 304 1.6E-49 T 14-10-2018 VS_II0815 c5956d57a6734804e22a3a619a319760 361 SUPERFAMILY SSF50494 13 304 3.85E-55 T 14-10-2018 IPR009003 Peptidase S1, PA clan VS_II0815 c5956d57a6734804e22a3a619a319760 361 Pfam PF00089 Trypsin 46 299 4.8E-35 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VS_II1213 7cf943341f2bea1476ad3d163e76f46b 318 SUPERFAMILY SSF161098 80 307 1.02E-40 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1213 7cf943341f2bea1476ad3d163e76f46b 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 156 317 8.4E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II1213 7cf943341f2bea1476ad3d163e76f46b 318 Gene3D G3DSA:1.10.3720.10 76 317 1.8E-46 T 14-10-2018 IPR035906 MetI-like superfamily VS_0355 f2f3be7a6fa439f9ff5461edf6bc637f 322 Gene3D G3DSA:3.40.190.10 30 319 1.5E-107 T 14-10-2018 VS_0355 f2f3be7a6fa439f9ff5461edf6bc637f 322 SUPERFAMILY SSF53850 25 321 6.35E-86 T 14-10-2018 VS_0355 f2f3be7a6fa439f9ff5461edf6bc637f 322 Pfam PF16868 NMT1-like family 30 319 3.9E-94 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VS_0355 f2f3be7a6fa439f9ff5461edf6bc637f 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 11 319 7.9E-109 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VS_0355 f2f3be7a6fa439f9ff5461edf6bc637f 322 Gene3D G3DSA:3.40.190.10 117 255 1.5E-107 T 14-10-2018 VS_0945 0147224f6fffe0a970c69e9162d35a96 147 SUPERFAMILY SSF46785 3 132 2.46E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0945 0147224f6fffe0a970c69e9162d35a96 147 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.3E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VS_0945 0147224f6fffe0a970c69e9162d35a96 147 Pfam PF02082 Transcriptional regulator 1 81 9.5E-20 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VS_0945 0147224f6fffe0a970c69e9162d35a96 147 Gene3D G3DSA:1.10.10.10 1 140 7.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0531 6124bdd7b692b5aa1b1776dbec808c62 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 8.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0531 6124bdd7b692b5aa1b1776dbec808c62 296 SUPERFAMILY SSF53850 90 288 3.98E-22 T 14-10-2018 VS_0531 6124bdd7b692b5aa1b1776dbec808c62 296 Gene3D G3DSA:1.10.10.10 4 92 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0531 6124bdd7b692b5aa1b1776dbec808c62 296 SUPERFAMILY SSF46785 2 85 1.72E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0531 6124bdd7b692b5aa1b1776dbec808c62 296 Gene3D G3DSA:3.40.190.290 95 292 4.0E-6 T 14-10-2018 VS_0531 6124bdd7b692b5aa1b1776dbec808c62 296 Pfam PF03466 LysR substrate binding domain 97 288 6.9E-10 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1315 14aafa8a4e38f11810647e05f091f62a 194 Gene3D G3DSA:1.10.10.60 2 65 8.6E-21 T 14-10-2018 VS_II1315 14aafa8a4e38f11810647e05f091f62a 194 SUPERFAMILY SSF48498 78 191 8.09E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_II1315 14aafa8a4e38f11810647e05f091f62a 194 SUPERFAMILY SSF46689 4 82 7.18E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1315 14aafa8a4e38f11810647e05f091f62a 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II1315 14aafa8a4e38f11810647e05f091f62a 194 Gene3D G3DSA:1.10.357.10 68 193 3.0E-18 T 14-10-2018 VS_II0279 7b78338b59461c422cc3deb3a066e284 372 SUPERFAMILY SSF69593 90 327 6.02E-10 T 14-10-2018 VS_II0279 7b78338b59461c422cc3deb3a066e284 372 Pfam PF01553 Acyltransferase 96 244 6.3E-11 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_1971 13a2a9983029845d5c9bb739636a7dc7 268 SUPERFAMILY SSF51366 1 266 3.58E-92 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_1971 13a2a9983029845d5c9bb739636a7dc7 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_1971 13a2a9983029845d5c9bb739636a7dc7 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 6.7E-103 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_1971 13a2a9983029845d5c9bb739636a7dc7 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.635 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_1971 13a2a9983029845d5c9bb739636a7dc7 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 5.1E-99 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VS_1971 13a2a9983029845d5c9bb739636a7dc7 268 Gene3D G3DSA:3.20.20.70 1 268 2.9E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1529 d33b894614fb328669e970937bca6aec 458 Pfam PF04932 O-Antigen ligase 241 378 2.3E-19 T 14-10-2018 IPR007016 O-antigen ligase-related VS_II1217 25c1f2c2278d3c382c14a0c29c8e8398 245 Pfam PF01925 Sulfite exporter TauE/SafE 14 237 1.9E-23 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.253 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 PIRSF PIRSF001430 1 253 8.7E-75 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 1.2E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.7E-10 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 6.5E-75 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 SUPERFAMILY SSF55120 1 255 1.25E-92 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 Gene3D G3DSA:3.30.70.660 105 242 4.4E-49 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VS_0903 8392585995c5af5bd87ba83ab1503d9f 264 Gene3D G3DSA:3.30.70.580 1 104 3.9E-39 T 14-10-2018 VS_1405 4c298bb56284a1fa19c4b96bdc083674 160 Gene3D G3DSA:3.30.70.860 95 160 1.5E-31 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VS_1405 4c298bb56284a1fa19c4b96bdc083674 160 SUPERFAMILY SSF89963 88 160 2.09E-30 T 14-10-2018 IPR036183 YajQ-like superfamily VS_1405 4c298bb56284a1fa19c4b96bdc083674 160 Gene3D G3DSA:3.30.70.990 9 94 5.3E-28 T 14-10-2018 IPR035570 UPF0234, N-terminal VS_1405 4c298bb56284a1fa19c4b96bdc083674 160 SUPERFAMILY SSF89963 2 81 9.29E-30 T 14-10-2018 IPR036183 YajQ-like superfamily VS_1405 4c298bb56284a1fa19c4b96bdc083674 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.878 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VS_1405 4c298bb56284a1fa19c4b96bdc083674 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.3E-64 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VS_0550 5dc36bde9036fc2f4a48e4d46cfe0260 132 Gene3D G3DSA:2.40.10.220 11 131 3.0E-32 T 14-10-2018 VS_0550 5dc36bde9036fc2f4a48e4d46cfe0260 132 Pfam PF07238 PilZ domain 13 110 1.8E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VS_0550 5dc36bde9036fc2f4a48e4d46cfe0260 132 SUPERFAMILY SSF141371 11 130 2.75E-33 T 14-10-2018 VS_0550 5dc36bde9036fc2f4a48e4d46cfe0260 132 PIRSF PIRSF028141 10 130 4.6E-40 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type VS_1188 c04acc747b5517ae2108adbf8fc22a93 208 Gene3D G3DSA:1.10.1070.20 12 207 1.4E-25 T 14-10-2018 VS_1188 c04acc747b5517ae2108adbf8fc22a93 208 Pfam PF07804 HipA-like C-terminal domain 28 148 1.1E-8 T 14-10-2018 IPR012893 HipA-like, C-terminal VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 Pfam PF01336 OB-fold nucleic acid binding domain 940 1012 6.1E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 Pfam PF02811 PHP domain 10 101 1.7E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 5 1030 13.099 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 975 5.9E-160 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 SMART SM00481 6 75 5.1E-4 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 Pfam PF14579 Helix-hairpin-helix motif 771 857 4.5E-14 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 272 696 5.3E-147 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 Gene3D G3DSA:3.20.20.140 1 249 1.3E-37 T 14-10-2018 VS_1040 1f0c14cf0b5f4f980a62bb537690fc63 1030 Gene3D G3DSA:2.40.50.140 922 1023 4.0E-5 T 14-10-2018 VS_2067 37cc006390429bda6e6725d74d8b54de 406 Pfam PF12704 MacB-like periplasmic core domain 33 212 8.9E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VS_2067 37cc006390429bda6e6725d74d8b54de 406 Pfam PF02687 FtsX-like permease family 300 399 5.1E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_2067 37cc006390429bda6e6725d74d8b54de 406 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 8 406 2.0E-133 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VS_2652 3b26c186afe6dd970c5cd2866200d884 244 SUPERFAMILY SSF46894 133 235 4.54E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_2652 3b26c186afe6dd970c5cd2866200d884 244 Pfam PF00072 Response regulator receiver domain 14 123 3.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2652 3b26c186afe6dd970c5cd2866200d884 244 SUPERFAMILY SSF52172 7 134 5.83E-40 T 14-10-2018 IPR011006 CheY-like superfamily VS_2652 3b26c186afe6dd970c5cd2866200d884 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 233 9.1E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2652 3b26c186afe6dd970c5cd2866200d884 244 Gene3D G3DSA:1.10.10.10 130 241 5.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2652 3b26c186afe6dd970c5cd2866200d884 244 Gene3D G3DSA:3.40.50.2300 4 129 1.4E-36 T 14-10-2018 VS_2652 3b26c186afe6dd970c5cd2866200d884 244 SMART SM00862 159 233 3.2E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2652 3b26c186afe6dd970c5cd2866200d884 244 SMART SM00448 12 122 1.1E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2734 5acecc9ba59adbf9d831e4d0d75a75c8 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.6E-20 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VS_2734 5acecc9ba59adbf9d831e4d0d75a75c8 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 6.6E-21 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VS_2065 8e83cc269a79643ccdc868ea7b342236 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 4.9E-155 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VS_2065 8e83cc269a79643ccdc868ea7b342236 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 2.5E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VS_2065 8e83cc269a79643ccdc868ea7b342236 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 7.0E-210 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 VS_2065 8e83cc269a79643ccdc868ea7b342236 414 Pfam PF02687 FtsX-like permease family 300 407 9.6E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_II0955 965c3ca15d2fce5185a7d6732dd86d01 393 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 13 127 1.6E-22 T 14-10-2018 IPR032871 AHH domain-containing protein VS_3123 7ccfd3027427e36b49994ce41cd539e7 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 5.5E-59 T 14-10-2018 IPR007456 Smg VS_3123 7ccfd3027427e36b49994ce41cd539e7 158 Hamap MF_00598 Protein Smg [smg]. 2 158 32.3 T 14-10-2018 IPR007456 Smg VS_2949 b019ff9a3d53c15047587663d586295c 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 291 1.3E-43 T 14-10-2018 IPR000160 GGDEF domain VS_2949 b019ff9a3d53c15047587663d586295c 316 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 294 8.8E-47 T 14-10-2018 IPR000160 GGDEF domain VS_2949 b019ff9a3d53c15047587663d586295c 316 SUPERFAMILY SSF55073 141 297 2.28E-47 T 14-10-2018 IPR029787 Nucleotide cyclase VS_2949 b019ff9a3d53c15047587663d586295c 316 SMART SM00267 125 295 7.3E-51 T 14-10-2018 IPR000160 GGDEF domain VS_2949 b019ff9a3d53c15047587663d586295c 316 Gene3D G3DSA:3.30.70.270 124 298 5.2E-54 T 14-10-2018 VS_2939 1df5119edaefdbd9e36cb243aebf6978 398 Gene3D G3DSA:1.20.1250.20 5 187 1.3E-15 T 14-10-2018 VS_2939 1df5119edaefdbd9e36cb243aebf6978 398 PIRSF PIRSF004925 2 388 1.7E-101 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VS_2939 1df5119edaefdbd9e36cb243aebf6978 398 Pfam PF12832 MFS_1 like family 13 361 1.8E-38 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain VS_2939 1df5119edaefdbd9e36cb243aebf6978 398 SUPERFAMILY SSF103473 9 373 2.22E-32 T 14-10-2018 IPR036259 MFS transporter superfamily VS_2939 1df5119edaefdbd9e36cb243aebf6978 398 Gene3D G3DSA:1.20.1250.20 195 384 6.7E-31 T 14-10-2018 VS_II0739 a9fbc0acf5f26b8152a9bcc813f55b4f 50 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 2.0E-12 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VS_II0739 a9fbc0acf5f26b8152a9bcc813f55b4f 50 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.1E-25 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VS_II0529 f4bf41ea2897cd4240ece1b4e7d57ed4 668 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 45 668 6.3E-84 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VS_II0529 f4bf41ea2897cd4240ece1b4e7d57ed4 668 Gene3D G3DSA:2.170.130.10 42 149 1.8E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_II0529 f4bf41ea2897cd4240ece1b4e7d57ed4 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 137 1.9E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_II0529 f4bf41ea2897cd4240ece1b4e7d57ed4 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VS_II0529 f4bf41ea2897cd4240ece1b4e7d57ed4 668 Gene3D G3DSA:2.40.170.20 151 668 1.1E-102 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_II0529 f4bf41ea2897cd4240ece1b4e7d57ed4 668 Pfam PF00593 TonB dependent receptor 233 666 1.1E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_II0529 f4bf41ea2897cd4240ece1b4e7d57ed4 668 SUPERFAMILY SSF56935 36 668 4.4E-82 T 14-10-2018 VS_2342 614e172256a2a8659a02d030343efc57 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_2342 614e172256a2a8659a02d030343efc57 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.561 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VS_2342 614e172256a2a8659a02d030343efc57 343 Gene3D G3DSA:3.40.1390.10 1 99 9.8E-32 T 14-10-2018 VS_2342 614e172256a2a8659a02d030343efc57 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 3.0E-21 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VS_2342 614e172256a2a8659a02d030343efc57 343 SUPERFAMILY SSF51161 32 316 3.24E-82 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_2342 614e172256a2a8659a02d030343efc57 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.21 T 14-10-2018 IPR001451 Hexapeptide repeat VS_2342 614e172256a2a8659a02d030343efc57 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 5.0E-115 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VS_2342 614e172256a2a8659a02d030343efc57 343 Gene3D G3DSA:2.160.10.10 100 309 7.6E-62 T 14-10-2018 VS_2342 614e172256a2a8659a02d030343efc57 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.7E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VS_2342 614e172256a2a8659a02d030343efc57 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 6.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat VS_2342 614e172256a2a8659a02d030343efc57 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 2.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VS_1192 e9aa415ca2c6fd605eaee0ccc3d94ebf 411 SUPERFAMILY SSF53383 5 409 6.05E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1192 e9aa415ca2c6fd605eaee0ccc3d94ebf 411 Gene3D G3DSA:3.40.640.10 33 289 5.4E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1192 e9aa415ca2c6fd605eaee0ccc3d94ebf 411 Gene3D G3DSA:3.90.1150.10 24 404 5.4E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1192 e9aa415ca2c6fd605eaee0ccc3d94ebf 411 Pfam PF00266 Aminotransferase class-V 26 400 4.7E-66 T 14-10-2018 IPR000192 Aminotransferase class V domain VS_1192 e9aa415ca2c6fd605eaee0ccc3d94ebf 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 403 1.1E-158 T 14-10-2018 IPR011340 Cysteine desulfurase-related VS_0919 581557a6f525260b5fdc0831131d32de 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 1.2E-59 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 Gene3D G3DSA:1.20.1080.10 1 227 5.0E-85 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 Pfam PF00230 Major intrinsic protein 3 222 1.3E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 SUPERFAMILY SSF81338 2 226 2.49E-68 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.242 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VS_0919 581557a6f525260b5fdc0831131d32de 229 PRINTS PR00783 Major intrinsic protein family signature 136 154 4.8E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 PRINTS PR00783 Major intrinsic protein family signature 166 188 4.8E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 4.8E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 4.8E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 4.8E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_0919 581557a6f525260b5fdc0831131d32de 229 PRINTS PR00783 Major intrinsic protein family signature 205 225 4.8E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0121 7828a3af3cc69c40249660b9d86d7d15 265 Gene3D G3DSA:3.40.50.1000 9 260 9.5E-78 T 14-10-2018 IPR023214 HAD superfamily VS_II0121 7828a3af3cc69c40249660b9d86d7d15 265 Gene3D G3DSA:3.30.1240.10 85 190 9.5E-78 T 14-10-2018 VS_II0121 7828a3af3cc69c40249660b9d86d7d15 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 2.0E-50 T 14-10-2018 IPR000150 Cof family GO:0016787 VS_II0121 7828a3af3cc69c40249660b9d86d7d15 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 3.9E-22 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VS_II0121 7828a3af3cc69c40249660b9d86d7d15 265 SUPERFAMILY SSF56784 3 264 4.78E-68 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0121 7828a3af3cc69c40249660b9d86d7d15 265 ProSitePatterns PS01228 Hypothetical cof family signature 1. 8 19 - T 14-10-2018 VS_II0121 7828a3af3cc69c40249660b9d86d7d15 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 5.0E-59 T 14-10-2018 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 Pfam PF00764 Arginosuccinate synthase 29 415 5.3E-146 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 Hamap MF_00005 Argininosuccinate synthase [argG]. 25 421 51.84 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 31 39 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 Gene3D G3DSA:3.40.50.620 28 196 1.1E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 Gene3D G3DSA:1.20.5.470 387 421 2.1E-8 T 14-10-2018 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 SUPERFAMILY SSF69864 196 421 4.97E-88 T 14-10-2018 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 140 151 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 TIGRFAM TIGR00032 argG: argininosuccinate synthase 27 414 4.9E-136 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 SUPERFAMILY SSF52402 26 189 1.35E-47 T 14-10-2018 VS_2886 ff8e4031d0dcb5618643ef13797c24b4 422 Gene3D G3DSA:3.90.1260.10 87 375 1.1E-144 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VS_2759 bb85e822fb7349659d8f15e4c12dd7c1 152 SUPERFAMILY SSF55804 1 146 5.49E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_2759 bb85e822fb7349659d8f15e4c12dd7c1 152 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_2759 bb85e822fb7349659d8f15e4c12dd7c1 152 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 1.3E-50 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VS_2759 bb85e822fb7349659d8f15e4c12dd7c1 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 5.3E-38 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_2759 bb85e822fb7349659d8f15e4c12dd7c1 152 Gene3D G3DSA:3.40.930.10 1 149 2.3E-53 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_2806 d85717f198b834159b98b57816768577 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.0E-49 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2806 d85717f198b834159b98b57816768577 126 SUPERFAMILY SSF64263 1 119 5.76E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2806 d85717f198b834159b98b57816768577 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.694 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2806 d85717f198b834159b98b57816768577 126 Gene3D G3DSA:3.90.1030.10 1 117 6.4E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2806 d85717f198b834159b98b57816768577 126 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2806 d85717f198b834159b98b57816768577 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0934 b445ab4987521c9628050c5f7ccb2b62 271 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 3.1E-74 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 VS_II0226 9edde08e8ddf551ea8962598732d5668 262 SUPERFAMILY SSF46689 213 260 3.58E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0226 9edde08e8ddf551ea8962598732d5668 262 SMART SM00342 176 258 1.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0226 9edde08e8ddf551ea8962598732d5668 262 Gene3D G3DSA:1.10.10.60 156 261 5.9E-23 T 14-10-2018 VS_II0226 9edde08e8ddf551ea8962598732d5668 262 Pfam PF12833 Helix-turn-helix domain 182 260 3.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0226 9edde08e8ddf551ea8962598732d5668 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 8.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0226 9edde08e8ddf551ea8962598732d5668 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 8.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0226 9edde08e8ddf551ea8962598732d5668 262 SUPERFAMILY SSF51182 19 185 1.69E-9 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_0018 143fc8f57073f35e816a4d5d838388b6 262 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 114 225 1.2E-11 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VS_1355 ae100db5210499d6c6fbadb044eae15b 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 214 1.0E-81 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_1355 ae100db5210499d6c6fbadb044eae15b 218 PIRSF PIRSF006293 2 218 3.0E-79 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_1355 ae100db5210499d6c6fbadb044eae15b 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 215 46.941 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_1355 ae100db5210499d6c6fbadb044eae15b 218 SUPERFAMILY SSF52402 5 214 7.94E-63 T 14-10-2018 VS_1355 ae100db5210499d6c6fbadb044eae15b 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 207 1.9E-78 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_1355 ae100db5210499d6c6fbadb044eae15b 218 Gene3D G3DSA:3.40.50.620 2 218 3.3E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2210 ec95a55b24833b7c7c3878ee8dd6b875 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.9E-84 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_2210 ec95a55b24833b7c7c3878ee8dd6b875 453 PIRSF PIRSF006066 1 270 3.2E-89 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_2210 ec95a55b24833b7c7c3878ee8dd6b875 453 PIRSF PIRSF006066 271 447 2.5E-49 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_2210 ec95a55b24833b7c7c3878ee8dd6b875 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 1.6E-116 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 SUPERFAMILY SSF81442 45 552 6.93E-192 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 499 9.4E-150 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 48 73 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 122 146 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 398 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 345 366 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 458 479 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 224 243 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 95 118 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 275 296 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 336 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 408 427 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 PRINTS PR01165 Cytochrome c oxidase subunit I signature 195 213 1.0E-121 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 277 331 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 Gene3D G3DSA:1.20.210.10 36 553 1.5E-217 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0366 9dd21edbef9347fe25a840e7a8b00738 553 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 49 552 7.2E-213 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VS_0648 2e91a3a86afac0b0ae002ee5060242e4 294 SUPERFAMILY SSF111331 8 290 7.98E-92 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VS_0648 2e91a3a86afac0b0ae002ee5060242e4 294 Gene3D G3DSA:3.40.50.10330 23 289 2.6E-91 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VS_0648 2e91a3a86afac0b0ae002ee5060242e4 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.126 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VS_0648 2e91a3a86afac0b0ae002ee5060242e4 294 Gene3D G3DSA:2.60.200.30 129 266 2.6E-91 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VS_0648 2e91a3a86afac0b0ae002ee5060242e4 294 Pfam PF01513 ATP-NAD kinase 8 273 4.8E-71 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 Pfam PF13654 AAA domain 9 291 5.5E-26 T 14-10-2018 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 317 333 1.2E-10 T 14-10-2018 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 460 478 1.2E-10 T 14-10-2018 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 430 449 1.2E-10 T 14-10-2018 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 400 419 1.2E-10 T 14-10-2018 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 403 507 6.2E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 Gene3D G3DSA:3.30.230.10 294 536 6.5E-91 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 Gene3D G3DSA:3.40.50.300 31 206 4.5E-14 T 14-10-2018 VS_1430 70cf11bdfb8c6266c587d2d04a4ff4af 550 SUPERFAMILY SSF54211 317 509 1.1E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_II0190 6135b03625295b4abe967caba2c32c73 376 Gene3D G3DSA:2.40.50.100 62 255 1.0E-33 T 14-10-2018 VS_II0190 6135b03625295b4abe967caba2c32c73 376 Gene3D G3DSA:1.10.287.470 96 219 1.0E-33 T 14-10-2018 VS_II0190 6135b03625295b4abe967caba2c32c73 376 SUPERFAMILY SSF111369 61 114 4.84E-6 T 14-10-2018 VS_II0190 6135b03625295b4abe967caba2c32c73 376 Gene3D G3DSA:2.40.30.170 256 341 1.0E-33 T 14-10-2018 VS_II0190 6135b03625295b4abe967caba2c32c73 376 Pfam PF13533 Biotin-lipoyl like 64 111 5.1E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VS_0178 2eb10c849ef389b1ca08949c3dae5eca 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.053 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_0178 2eb10c849ef389b1ca08949c3dae5eca 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 2.4E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VS_0178 2eb10c849ef389b1ca08949c3dae5eca 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.0E-68 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VS_0178 2eb10c849ef389b1ca08949c3dae5eca 213 Gene3D G3DSA:3.40.50.2020 1 213 1.5E-78 T 14-10-2018 VS_0178 2eb10c849ef389b1ca08949c3dae5eca 213 SUPERFAMILY SSF53271 2 211 5.96E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_2055 3b0e2c42ee82f6ec270e9cbb2ae58cc4 90 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 89 18.856 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VS_2055 3b0e2c42ee82f6ec270e9cbb2ae58cc4 90 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 84 2.2E-17 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VS_2903 b02ba7a09cf129564e10f40930d8613f 305 PIRSF PIRSF005355 1 303 5.7E-84 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VS_2903 b02ba7a09cf129564e10f40930d8613f 305 Pfam PF01040 UbiA prenyltransferase family 21 272 2.8E-40 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VS_2903 b02ba7a09cf129564e10f40930d8613f 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.844 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VS_2903 b02ba7a09cf129564e10f40930d8613f 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 2.2E-98 T 14-10-2018 VS_II1219 595d8123cb220dc8987d740f672f30b7 160 SUPERFAMILY SSF55729 1 153 1.12E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II1219 595d8123cb220dc8987d740f672f30b7 160 Gene3D G3DSA:3.40.630.30 3 160 5.0E-31 T 14-10-2018 VS_II1219 595d8123cb220dc8987d740f672f30b7 160 Pfam PF00583 Acetyltransferase (GNAT) family 44 146 1.4E-12 T 14-10-2018 IPR000182 GNAT domain VS_II1339 5b29bc23cb3f91b86e77a3e3d2a99464 215 SUPERFAMILY SSF47616 83 199 1.85E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_II1339 5b29bc23cb3f91b86e77a3e3d2a99464 215 Gene3D G3DSA:1.20.1050.10 84 191 1.7E-55 T 14-10-2018 VS_II1339 5b29bc23cb3f91b86e77a3e3d2a99464 215 SUPERFAMILY SSF52833 3 85 6.35E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II1339 5b29bc23cb3f91b86e77a3e3d2a99464 215 Gene3D G3DSA:3.40.30.10 5 195 1.7E-55 T 14-10-2018 VS_II1339 5b29bc23cb3f91b86e77a3e3d2a99464 215 Pfam PF14834 Glutathione S-transferase, C-terminal domain 87 197 6.8E-8 T 14-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VS_II1339 5b29bc23cb3f91b86e77a3e3d2a99464 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 6.5E-8 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_II1443 d5ee5fc9e28eb9f4c1de5e2c2198318a 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.0E-32 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 VS_II1443 d5ee5fc9e28eb9f4c1de5e2c2198318a 118 Gene3D G3DSA:3.30.1370.150 59 118 1.6E-31 T 14-10-2018 VS_1710 e7988baf19039ec01f001000b1855d09 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 214 1.9E-31 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VS_1710 e7988baf19039ec01f001000b1855d09 344 SUPERFAMILY SSF46689 293 342 2.91E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1710 e7988baf19039ec01f001000b1855d09 344 SMART SM00342 258 340 2.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_1710 e7988baf19039ec01f001000b1855d09 344 Pfam PF12833 Helix-turn-helix domain 264 340 1.0E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_1710 e7988baf19039ec01f001000b1855d09 344 Gene3D G3DSA:1.10.10.60 239 343 1.4E-21 T 14-10-2018 VS_0973 494f4014baab36c992d6ecfc76cdb36c 209 Pfam PF04205 FMN-binding domain 100 189 7.8E-20 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VS_0973 494f4014baab36c992d6ecfc76cdb36c 209 SMART SM00900 100 192 5.0E-37 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VS_0973 494f4014baab36c992d6ecfc76cdb36c 209 PIRSF PIRSF006091 1 205 4.2E-79 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VS_0973 494f4014baab36c992d6ecfc76cdb36c 209 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 27.053 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VS_0973 494f4014baab36c992d6ecfc76cdb36c 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 3.2E-67 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 Pfam PF03023 MviN-like protein 35 485 1.2E-145 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 10 517 1.1E-138 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 10 481 19.857 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PIRSF PIRSF002869 6 524 6.7E-150 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PRINTS PR01806 Virulence factor MviN signature 273 299 3.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PRINTS PR01806 Virulence factor MviN signature 40 59 3.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PRINTS PR01806 Virulence factor MviN signature 371 390 3.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PRINTS PR01806 Virulence factor MviN signature 171 192 3.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PRINTS PR01806 Virulence factor MviN signature 147 171 3.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PRINTS PR01806 Virulence factor MviN signature 423 440 3.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_0534 324aed6003dc7d7ab515008b3b8f192f 525 PRINTS PR01806 Virulence factor MviN signature 59 75 3.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 Gene3D G3DSA:2.40.50.100 43 76 7.3E-11 T 14-10-2018 VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 37 272 4.7E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 Gene3D G3DSA:2.40.30.170 32 42 7.3E-11 T 14-10-2018 VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 Gene3D G3DSA:1.10.287.470 109 175 8.5E-17 T 14-10-2018 VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 Gene3D G3DSA:1.10.287.470 77 108 7.3E-11 T 14-10-2018 VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 SUPERFAMILY SSF111369 35 122 4.71E-7 T 14-10-2018 VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 Gene3D G3DSA:2.40.50.100 176 236 8.5E-17 T 14-10-2018 VS_1299 07b31bfee19efd3c20985ea6bcc741de 324 Gene3D G3DSA:2.40.30.170 237 319 8.5E-17 T 14-10-2018 VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 Gene3D G3DSA:1.10.10.10 3 89 7.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 Gene3D G3DSA:3.40.190.10 183 281 3.9E-43 T 14-10-2018 VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 SUPERFAMILY SSF46785 9 87 1.28E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 SUPERFAMILY SSF53850 93 308 3.8E-37 T 14-10-2018 VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 Gene3D G3DSA:3.40.190.10 95 305 3.9E-43 T 14-10-2018 VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 Pfam PF03466 LysR substrate binding domain 99 309 2.7E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0074 52f3074fcea993bcd526c33a0f37b878 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1037 6c1c859494f14547bfbd255254a765a6 482 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 1.0E-127 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 Gene3D G3DSA:3.20.20.60 6 341 4.2E-150 T 14-10-2018 VS_1037 6c1c859494f14547bfbd255254a765a6 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 Gene3D G3DSA:3.40.1380.20 342 477 4.2E-150 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 PRINTS PR01050 Pyruvate kinase family signature 190 204 5.8E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 PRINTS PR01050 Pyruvate kinase family signature 223 249 5.8E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 PRINTS PR01050 Pyruvate kinase family signature 250 274 5.8E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 PRINTS PR01050 Pyruvate kinase family signature 275 299 5.8E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.8E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 PRINTS PR01050 Pyruvate kinase family signature 300 318 5.8E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 PRINTS PR01050 Pyruvate kinase family signature 319 335 5.8E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 SUPERFAMILY SSF50800 74 169 7.33E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VS_1037 6c1c859494f14547bfbd255254a765a6 482 Gene3D G3DSA:2.40.33.10 74 172 4.2E-150 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 SUPERFAMILY SSF51621 5 344 1.85E-86 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_1037 6c1c859494f14547bfbd255254a765a6 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 480 1.7E-163 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 SUPERFAMILY SSF52935 329 481 1.83E-35 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_1037 6c1c859494f14547bfbd255254a765a6 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 364 479 5.5E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 SUPERFAMILY SSF53383 15 399 3.09E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 3.0E-150 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 PIRSF PIRSF000521 27 157 8.5E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 PIRSF PIRSF000521 173 402 3.1E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 5.9E-208 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 69.166 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 Gene3D G3DSA:3.90.1150.10 25 392 7.3E-151 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 Pfam PF00202 Aminotransferase class-III 22 399 3.1E-128 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 Gene3D G3DSA:3.40.640.10 59 304 7.3E-151 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2861 35d9d096d3f666b5888150ef19faf5f3 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VS_II1464 d6b26f713fb8d8dd2ab76ebae39f848a 114 Pfam PF12614 Ribosome recycling factor 3 112 8.5E-20 T 14-10-2018 IPR022253 Ribosome recycling factor. bacterial VS_3037 e1446eda48b1bed3797fff1b19e17ab5 326 SUPERFAMILY SSF53474 36 317 2.42E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_3037 e1446eda48b1bed3797fff1b19e17ab5 326 Gene3D G3DSA:3.40.50.1820 27 326 1.9E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_3037 e1446eda48b1bed3797fff1b19e17ab5 326 Pfam PF12146 Serine aminopeptidase, S33 55 311 7.8E-56 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VS_II1157 ac1d7aec90fb4fc35db4b02c7735a864 218 SUPERFAMILY SSF55469 3 213 6.94E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_II1157 ac1d7aec90fb4fc35db4b02c7735a864 218 Pfam PF00881 Nitroreductase family 15 182 1.8E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VS_II1157 ac1d7aec90fb4fc35db4b02c7735a864 218 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 204 2.9E-80 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 VS_II1157 ac1d7aec90fb4fc35db4b02c7735a864 218 Gene3D G3DSA:3.40.109.10 1 189 6.1E-53 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VS_II1050 545d79e6b78690bc1449ebc7c78efa2a 412 Gene3D G3DSA:1.20.1250.20 3 402 4.4E-58 T 14-10-2018 VS_II1050 545d79e6b78690bc1449ebc7c78efa2a 412 Pfam PF07690 Major Facilitator Superfamily 15 295 2.4E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1050 545d79e6b78690bc1449ebc7c78efa2a 412 SUPERFAMILY SSF103473 10 398 2.62E-57 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II1409 18ccb8c43d301fa8be0a141fe2788af4 407 SMART SM00267 180 360 3.2E-47 T 14-10-2018 IPR000160 GGDEF domain VS_II1409 18ccb8c43d301fa8be0a141fe2788af4 407 Gene3D G3DSA:3.30.70.270 186 371 9.9E-49 T 14-10-2018 VS_II1409 18ccb8c43d301fa8be0a141fe2788af4 407 SUPERFAMILY SSF55073 196 362 9.42E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II1409 18ccb8c43d301fa8be0a141fe2788af4 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 356 2.3E-39 T 14-10-2018 IPR000160 GGDEF domain VS_II1409 18ccb8c43d301fa8be0a141fe2788af4 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 359 5.9E-42 T 14-10-2018 IPR000160 GGDEF domain VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 Gene3D G3DSA:1.10.10.60 184 234 4.2E-13 T 14-10-2018 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 SUPERFAMILY SSF46689 237 286 7.62E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 Gene3D G3DSA:1.10.10.60 235 287 1.1E-18 T 14-10-2018 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 Pfam PF12833 Helix-turn-helix domain 207 285 1.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 SUPERFAMILY SSF46689 187 235 5.02E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 8.3E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 8.3E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VS_II1319 34c09cf203defba2fc4ba2161cc44005 287 SMART SM00342 201 284 5.4E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_2316 6e58881fbc66ab1db26ffa9cddc41c91 412 Pfam PF00860 Permease family 3 371 4.5E-92 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VS_2316 6e58881fbc66ab1db26ffa9cddc41c91 412 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 1.2E-109 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VS_2316 6e58881fbc66ab1db26ffa9cddc41c91 412 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 Pfam PF04055 Radical SAM superfamily 24 178 1.2E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 SUPERFAMILY SSF102114 23 220 5.1E-29 T 14-10-2018 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 PIRSF PIRSF000371 45 245 3.0E-44 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 PIRSF PIRSF000371 1 48 3.3E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 7.2E-107 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 Gene3D G3DSA:3.20.20.70 2 246 3.0E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1050 58f707452ad4ccd74bb722bdbff8447f 246 Pfam PF13353 4Fe-4S single cluster domain 16 134 9.1E-20 T 14-10-2018 VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 340 1.4E-40 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 4.6E-150 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 4.0E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 Gene3D G3DSA:3.90.650.10 172 346 2.8E-72 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.667 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 Gene3D G3DSA:3.30.1330.10 7 171 5.7E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 SUPERFAMILY SSF55326 8 171 3.29E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VS_2318 7dd32492eb10a9e113bd65de89df12ce 346 SUPERFAMILY SSF56042 172 342 9.72E-63 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VS_II0144 c327214a63878a80db8948a45142872a 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 419 4.1E-141 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_II0144 c327214a63878a80db8948a45142872a 426 PIRSF PIRSF006066 1 426 1.1E-135 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_II0144 c327214a63878a80db8948a45142872a 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 415 1.4E-113 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VS_II0525 cc1981410278f19fff88790a0bbbd20a 140 Pfam PF13508 Acetyltransferase (GNAT) domain 48 120 5.5E-12 T 14-10-2018 IPR000182 GNAT domain VS_II0525 cc1981410278f19fff88790a0bbbd20a 140 SUPERFAMILY SSF55729 1 128 3.71E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0525 cc1981410278f19fff88790a0bbbd20a 140 Gene3D G3DSA:3.40.630.30 1 140 3.2E-30 T 14-10-2018 VS_II0775 0185800baa145831240ed283c5823f62 185 SMART SM00782 6 52 4.7E-27 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VS_II0775 0185800baa145831240ed283c5823f62 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 1.6E-9 T 14-10-2018 IPR013987 PhnA protein, N-terminal VS_II0775 0185800baa145831240ed283c5823f62 185 Pfam PF03831 PhnA domain 120 185 5.5E-21 T 14-10-2018 IPR013988 PhnA protein, C-terminal VS_II0775 0185800baa145831240ed283c5823f62 185 SUPERFAMILY SSF82057 118 184 2.98E-19 T 14-10-2018 VS_II0775 0185800baa145831240ed283c5823f62 185 Gene3D G3DSA:2.30.30.40 116 185 9.4E-22 T 14-10-2018 VS_II0861 5c19e86d9681db035b6a32c46d52eb8f 528 SMART SM00382 341 520 4.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0861 5c19e86d9681db035b6a32c46d52eb8f 528 Pfam PF00005 ABC transporter 337 478 2.8E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0861 5c19e86d9681db035b6a32c46d52eb8f 528 Gene3D G3DSA:3.40.50.300 313 525 2.3E-22 T 14-10-2018 VS_II0861 5c19e86d9681db035b6a32c46d52eb8f 528 SUPERFAMILY SSF90123 19 310 2.88E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0861 5c19e86d9681db035b6a32c46d52eb8f 528 Gene3D G3DSA:1.20.1560.10 14 312 2.0E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0861 5c19e86d9681db035b6a32c46d52eb8f 528 Pfam PF00664 ABC transporter transmembrane region 16 282 2.7E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0861 5c19e86d9681db035b6a32c46d52eb8f 528 SUPERFAMILY SSF52540 320 516 6.55E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0836 44f2ea69f5054a415ebf577f37d266d0 286 SUPERFAMILY SSF51069 131 277 2.22E-8 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VS_II0836 44f2ea69f5054a415ebf577f37d266d0 286 Gene3D G3DSA:3.10.200.10 60 276 5.8E-5 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VS_2564 952b348b5f97cfe512570d1fe3e62688 526 Gene3D G3DSA:3.30.590.20 21 526 4.4E-191 T 14-10-2018 VS_2564 952b348b5f97cfe512570d1fe3e62688 526 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 526 222.365 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VS_2564 952b348b5f97cfe512570d1fe3e62688 526 SUPERFAMILY SSF55931 8 517 2.22E-201 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VS_2564 952b348b5f97cfe512570d1fe3e62688 526 Pfam PF04262 Glutamate-cysteine ligase 17 382 5.3E-167 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VS_2564 952b348b5f97cfe512570d1fe3e62688 526 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 12 519 2.2E-208 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 SMART SM00283 381 642 5.1E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 SUPERFAMILY SSF103190 124 195 7.85E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 Gene3D G3DSA:1.10.287.950 312 644 8.3E-68 T 14-10-2018 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 609 4.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 Gene3D G3DSA:3.30.450.20 75 184 3.8E-31 T 14-10-2018 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 Pfam PF02743 Cache domain 46 274 1.3E-19 T 14-10-2018 IPR033479 Double Cache domain 1 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 Gene3D G3DSA:3.30.450.20 64 285 3.8E-31 T 14-10-2018 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 SMART SM00304 312 366 4.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 SMART SM00304 401 461 97.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VS_II1260 c2764072ec5cf2d935bf7673f065b6e1 644 SUPERFAMILY SSF58104 334 643 1.83E-70 T 14-10-2018 VS_II0054 dce18ad96d17933bbbc57a193a871333 447 PIRSF PIRSF006066 20 447 7.7E-113 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_II0054 dce18ad96d17933bbbc57a193a871333 447 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 28 436 1.8E-94 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VS_II0054 dce18ad96d17933bbbc57a193a871333 447 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 38 439 7.6E-105 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_0213 1a498cab3caf8efa48b89bfcf00cf61c 378 Gene3D G3DSA:3.10.560.10 66 255 1.1E-116 T 14-10-2018 VS_0213 1a498cab3caf8efa48b89bfcf00cf61c 378 Pfam PF10531 SLBB domain 174 219 2.3E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_0213 1a498cab3caf8efa48b89bfcf00cf61c 378 Pfam PF10531 SLBB domain 257 303 1.0E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_0213 1a498cab3caf8efa48b89bfcf00cf61c 378 Gene3D G3DSA:3.30.1950.10 89 170 1.1E-116 T 14-10-2018 VS_0213 1a498cab3caf8efa48b89bfcf00cf61c 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 83 166 8.6E-26 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VS_0213 1a498cab3caf8efa48b89bfcf00cf61c 378 Gene3D G3DSA:1.20.5.70 345 378 7.8E-17 T 14-10-2018 VS_0213 1a498cab3caf8efa48b89bfcf00cf61c 378 Gene3D G3DSA:3.10.560.10 53 342 1.1E-116 T 14-10-2018 VS_2256 c732679c6c16963bc09d527ea0d37738 177 SUPERFAMILY SSF52218 4 173 6.83E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2256 c732679c6c16963bc09d527ea0d37738 177 Gene3D G3DSA:3.40.50.360 3 177 2.7E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2256 c732679c6c16963bc09d527ea0d37738 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VS_2256 c732679c6c16963bc09d527ea0d37738 177 Pfam PF00258 Flavodoxin 6 162 5.0E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VS_2256 c732679c6c16963bc09d527ea0d37738 177 PIRSF PIRSF038996 1 174 9.0E-66 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VS_2256 c732679c6c16963bc09d527ea0d37738 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 2.7E-70 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VS_II1498 64bbde2da7051e64b912c6c06cb991c7 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 4.7E-15 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VS_II1498 64bbde2da7051e64b912c6c06cb991c7 145 Gene3D G3DSA:1.20.1290.10 1 144 4.1E-41 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VS_II1498 64bbde2da7051e64b912c6c06cb991c7 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 93 1.8E-15 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VS_II1498 64bbde2da7051e64b912c6c06cb991c7 145 SUPERFAMILY SSF69118 6 144 6.43E-38 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VS_0037 8e5802e5f74b3efa325db9150d99862a 83 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.177 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VS_0037 8e5802e5f74b3efa325db9150d99862a 83 SUPERFAMILY SSF64307 9 80 3.92E-25 T 14-10-2018 IPR036868 TusA-like domain superfamily VS_0037 8e5802e5f74b3efa325db9150d99862a 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain VS_0037 8e5802e5f74b3efa325db9150d99862a 83 Pfam PF01206 Sulfurtransferase TusA 10 79 3.5E-23 T 14-10-2018 IPR001455 TusA-like domain VS_0037 8e5802e5f74b3efa325db9150d99862a 83 Gene3D G3DSA:3.30.110.40 4 80 7.3E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 Gene3D G3DSA:2.70.98.40 17 716 6.6E-280 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 Pfam PF06165 Glycosyltransferase family 36 36 287 7.6E-44 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 Gene3D G3DSA:1.50.10.10 336 751 6.6E-280 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 Gene3D G3DSA:2.60.420.10 329 804 6.6E-280 T 14-10-2018 VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 321 745 6.0E-133 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 SUPERFAMILY SSF74650 16 276 7.22E-31 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 Gene3D G3DSA:1.20.890.20 279 328 6.6E-280 T 14-10-2018 VS_II1386 b0b3199626036972f771c81cb1c50b1f 818 SUPERFAMILY SSF48208 301 818 7.65E-102 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VS_1680 8634f4ddb87c33ac84ab0ce923ad2434 165 Pfam PF01863 Protein of unknown function DUF45 94 150 1.0E-10 T 14-10-2018 IPR002725 Protein of unknown function DUF45 VS_1680 8634f4ddb87c33ac84ab0ce923ad2434 165 Gene3D G3DSA:3.30.2010.10 68 163 6.1E-7 T 14-10-2018 VS_1281 fcea05fcd30965bda0e312faf39a3c5a 160 Gene3D G3DSA:1.25.40.10 1 62 1.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1281 fcea05fcd30965bda0e312faf39a3c5a 160 SUPERFAMILY SSF48452 5 131 1.1E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1281 fcea05fcd30965bda0e312faf39a3c5a 160 Gene3D G3DSA:1.25.40.10 63 154 3.8E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1281 fcea05fcd30965bda0e312faf39a3c5a 160 Pfam PF12688 Tetratrico peptide repeat 38 156 5.2E-12 T 14-10-2018 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 7.9E-167 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 Gene3D G3DSA:3.40.605.10 16 408 3.9E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 Gene3D G3DSA:3.40.309.10 223 373 3.9E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 Pfam PF00171 Aldehyde dehydrogenase family 9 279 5.7E-16 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.353 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 SUPERFAMILY SSF53720 5 409 2.75E-111 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VS_2415 c509c417cfb868e5cca391d6d13eaa2d 416 PIRSF PIRSF000151 1 416 1.6E-165 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VS_2549 0ea5b01afc095345075533536e3d4e8b 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VS_2549 0ea5b01afc095345075533536e3d4e8b 408 Gene3D G3DSA:1.20.81.30 260 371 3.3E-26 T 14-10-2018 VS_2549 0ea5b01afc095345075533536e3d4e8b 408 Gene3D G3DSA:1.20.81.30 59 175 3.2E-28 T 14-10-2018 VS_2549 0ea5b01afc095345075533536e3d4e8b 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 3.6E-26 T 14-10-2018 IPR018076 Type II secretion system F domain VS_2549 0ea5b01afc095345075533536e3d4e8b 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 2.3E-31 T 14-10-2018 IPR018076 Type II secretion system F domain VS_2549 0ea5b01afc095345075533536e3d4e8b 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 3.1E-18 T 14-10-2018 IPR003004 GspF/PilC family VS_2549 0ea5b01afc095345075533536e3d4e8b 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 3.1E-18 T 14-10-2018 IPR003004 GspF/PilC family VS_2549 0ea5b01afc095345075533536e3d4e8b 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 3.1E-18 T 14-10-2018 IPR003004 GspF/PilC family VS_2549 0ea5b01afc095345075533536e3d4e8b 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 3.1E-18 T 14-10-2018 IPR003004 GspF/PilC family VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 Pfam PF01632 Ribosomal protein L35 2 61 2.1E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.4E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.3E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.425 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 Gene3D G3DSA:2.40.50.530 1 64 1.3E-18 T 14-10-2018 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 SUPERFAMILY SSF143034 2 63 2.35E-20 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1230 672f72b4d24c8a0c8a413a689a520a86 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0827 d8535ef5595e636c5cfb51e4d9ec2ba7 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 2.7E-35 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VS_0827 d8535ef5595e636c5cfb51e4d9ec2ba7 145 Pfam PF02050 Flagellar FliJ protein 18 140 1.4E-28 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VS_2225 2ea50bc9ceeff85153d5ac1342224707 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 2.7E-69 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 VS_2225 2ea50bc9ceeff85153d5ac1342224707 233 Pfam PF00814 Glycoprotease family 30 156 9.2E-33 T 14-10-2018 IPR000905 Gcp-like domain VS_2225 2ea50bc9ceeff85153d5ac1342224707 233 Gene3D G3DSA:3.30.420.40 5 224 3.7E-82 T 14-10-2018 VS_2225 2ea50bc9ceeff85153d5ac1342224707 233 SUPERFAMILY SSF53067 4 103 1.38E-31 T 14-10-2018 VS_2225 2ea50bc9ceeff85153d5ac1342224707 233 Gene3D G3DSA:3.30.420.40 96 190 3.7E-82 T 14-10-2018 VS_2225 2ea50bc9ceeff85153d5ac1342224707 233 SUPERFAMILY SSF53067 111 219 4.53E-28 T 14-10-2018 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 Gene3D G3DSA:3.40.710.10 19 282 1.1E-90 T 14-10-2018 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 SUPERFAMILY SSF69189 284 376 1.41E-27 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 SUPERFAMILY SSF56601 13 284 1.29E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 SMART SM00936 284 374 1.1E-37 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 2.8E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 2.8E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 2.8E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 264 6.4E-93 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 373 8.6E-27 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_0710 6b75b2ef63f3625233cb7477706ebfb5 393 Gene3D G3DSA:2.60.410.10 284 374 2.6E-30 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_2183 9c71a70f7ea77f8eecb719d5eb346f32 336 Pfam PF03601 Conserved hypothetical protein 698 53 317 1.6E-54 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VS_1897 0b3d413ffb133f1cd246a5088e933beb 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 9 323 2.6E-146 T 14-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VS_1897 0b3d413ffb133f1cd246a5088e933beb 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 100 116 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1897 0b3d413ffb133f1cd246a5088e933beb 323 Gene3D G3DSA:1.10.620.20 4 292 1.2E-111 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VS_1897 0b3d413ffb133f1cd246a5088e933beb 323 SUPERFAMILY SSF47240 7 323 1.01E-103 T 14-10-2018 IPR009078 Ferritin-like superfamily VS_1897 0b3d413ffb133f1cd246a5088e933beb 323 Pfam PF00268 Ribonucleotide reductase, small chain 12 284 4.0E-88 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1897 0b3d413ffb133f1cd246a5088e933beb 323 PIRSF PIRSF000355 1 320 6.4E-87 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_0252 71894a9cc1c5b388d5099d5eeb9f5ce2 476 Pfam PF00939 Sodium:sulfate symporter transmembrane region 14 471 5.6E-47 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VS_0252 71894a9cc1c5b388d5099d5eeb9f5ce2 476 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 41 471 1.4E-80 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VS_2373 4fb4b2d07fb5d84dc77745c81dd7589e 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.072 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_2373 4fb4b2d07fb5d84dc77745c81dd7589e 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_2373 4fb4b2d07fb5d84dc77745c81dd7589e 416 Gene3D G3DSA:3.40.640.10 37 288 2.6E-184 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2373 4fb4b2d07fb5d84dc77745c81dd7589e 416 SUPERFAMILY SSF53383 6 415 1.18E-182 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2373 4fb4b2d07fb5d84dc77745c81dd7589e 416 Gene3D G3DSA:3.90.1150.10 10 393 2.6E-184 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2373 4fb4b2d07fb5d84dc77745c81dd7589e 416 Pfam PF00464 Serine hydroxymethyltransferase 9 385 1.8E-180 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_2373 4fb4b2d07fb5d84dc77745c81dd7589e 416 PIRSF PIRSF000412 1 415 6.7E-167 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VS_1698 b2d0fbb522626ad16e1281a6cdc9d1c1 598 Pfam PF01432 Peptidase family M3 206 580 5.4E-25 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VS_1698 b2d0fbb522626ad16e1281a6cdc9d1c1 598 SUPERFAMILY SSF55486 5 580 1.95E-90 T 14-10-2018 VS_1698 b2d0fbb522626ad16e1281a6cdc9d1c1 598 Gene3D G3DSA:1.20.140.70 22 158 1.0E-8 T 14-10-2018 VS_1698 b2d0fbb522626ad16e1281a6cdc9d1c1 598 Pfam PF08439 Oligopeptidase F 107 174 8.9E-9 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain VS_1698 b2d0fbb522626ad16e1281a6cdc9d1c1 598 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.1E-203 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VS_1698 b2d0fbb522626ad16e1281a6cdc9d1c1 598 Gene3D G3DSA:1.10.1370.20 218 598 5.1E-111 T 14-10-2018 VS_1826 276221832573c4545c250fa5345bf146 647 SUPERFAMILY SSF52172 3 127 2.49E-8 T 14-10-2018 IPR011006 CheY-like superfamily VS_1826 276221832573c4545c250fa5345bf146 647 SMART SM00388 340 488 0.0089 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1826 276221832573c4545c250fa5345bf146 647 SUPERFAMILY SSF51206 201 310 9.43E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VS_1826 276221832573c4545c250fa5345bf146 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 375 3.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VS_1826 276221832573c4545c250fa5345bf146 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 7.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1826 276221832573c4545c250fa5345bf146 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 7.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1826 276221832573c4545c250fa5345bf146 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 7.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1826 276221832573c4545c250fa5345bf146 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 7.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VS_1826 276221832573c4545c250fa5345bf146 647 Gene3D G3DSA:2.60.120.10 159 318 4.5E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_1826 276221832573c4545c250fa5345bf146 647 Gene3D G3DSA:3.30.565.10 489 645 6.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1826 276221832573c4545c250fa5345bf146 647 SMART SM00387 528 641 4.6E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_1826 276221832573c4545c250fa5345bf146 647 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 8.7E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VS_1826 276221832573c4545c250fa5345bf146 647 Gene3D G3DSA:3.40.50.2300 2 138 3.2E-9 T 14-10-2018 VS_1826 276221832573c4545c250fa5345bf146 647 SUPERFAMILY SSF47384 335 375 1.84E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VS_1826 276221832573c4545c250fa5345bf146 647 SUPERFAMILY SSF55874 477 639 2.36E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VS_1826 276221832573c4545c250fa5345bf146 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 640 9.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VS_2212 8ecc0c34cf7d9e43b16b0b6325036c79 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 6.0E-80 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VS_2212 8ecc0c34cf7d9e43b16b0b6325036c79 331 PIRSF PIRSF006470 1 331 6.1E-125 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VS_2212 8ecc0c34cf7d9e43b16b0b6325036c79 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.5E-103 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VS_2212 8ecc0c34cf7d9e43b16b0b6325036c79 331 Gene3D G3DSA:3.40.190.170 27 328 9.0E-90 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 SMART SM00671 187 222 2.7E-7 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 SMART SM00671 224 265 20.0 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 SMART SM00671 83 114 12.0 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 SMART SM00671 266 301 0.25 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 SMART SM00671 151 186 1.4E-8 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 SMART SM00671 115 150 7.6E-5 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Gene3D G3DSA:1.25.40.10 169 332 3.0E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 SUPERFAMILY SSF81901 65 304 4.55E-45 T 14-10-2018 VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Pfam PF08238 Sel1 repeat 247 265 0.81 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Pfam PF08238 Sel1 repeat 268 294 0.086 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Pfam PF08238 Sel1 repeat 118 150 0.029 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Pfam PF08238 Sel1 repeat 187 221 1.5E-7 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Pfam PF08238 Sel1 repeat 99 109 15.0 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Pfam PF08238 Sel1 repeat 151 186 8.5E-9 T 14-10-2018 IPR006597 Sel1-like repeat VS_1745 cf2e776b000ff3e7b29c00f7a2526b6c 335 Gene3D G3DSA:1.25.40.10 31 163 6.3E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0399 b33db03808dad2976fed52978a187471 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 295 5.3E-25 T 14-10-2018 VS_II0399 b33db03808dad2976fed52978a187471 336 Gene3D G3DSA:3.40.190.10 30 297 1.1E-77 T 14-10-2018 VS_II0399 b33db03808dad2976fed52978a187471 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 7 333 2.6E-150 T 14-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative VS_II0399 b33db03808dad2976fed52978a187471 336 SUPERFAMILY SSF53850 24 326 4.05E-59 T 14-10-2018 VS_II0399 b33db03808dad2976fed52978a187471 336 PIRSF PIRSF002825 1 329 1.3E-75 T 14-10-2018 IPR026045 Ferric binding protein VS_II0399 b33db03808dad2976fed52978a187471 336 Gene3D G3DSA:3.40.190.10 133 311 1.1E-77 T 14-10-2018 VS_2803 ba8e7318d5022510b18956274bf152b7 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 1.7E-24 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VS_2803 ba8e7318d5022510b18956274bf152b7 206 SUPERFAMILY SSF54534 7 205 1.87E-54 T 14-10-2018 VS_2803 ba8e7318d5022510b18956274bf152b7 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 1.3E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VS_2803 ba8e7318d5022510b18956274bf152b7 206 Gene3D G3DSA:3.10.50.40 69 206 2.7E-48 T 14-10-2018 VS_2803 ba8e7318d5022510b18956274bf152b7 206 Gene3D G3DSA:1.10.287.460 4 68 8.4E-20 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 876 1.2E-284 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.6E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.6E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 2.6E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.6E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 2.6E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 2.6E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 2.6E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 876 17.696 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 SUPERFAMILY SSF51621 6 876 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VS_2890 1b4f808e927278bedf3fb306fdc98f55 876 Gene3D G3DSA:1.20.1440.90 304 386 1.1E-22 T 14-10-2018 VS_II0967 cfefaafacb8b9a8fd62aef1dc47ee29d 256 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 21 117 3.5E-13 T 14-10-2018 IPR032871 AHH domain-containing protein VS_0665 cdb8b6a9be5c5bacb6625201d885b5a3 162 Pfam PF11810 Domain of unknown function (DUF3332) 1 157 1.3E-38 T 14-10-2018 IPR021768 Protein of unknown function DUF3332 VS_0665 cdb8b6a9be5c5bacb6625201d885b5a3 162 Gene3D G3DSA:2.60.120.200 12 161 1.7E-5 T 14-10-2018 VS_0665 cdb8b6a9be5c5bacb6625201d885b5a3 162 SUPERFAMILY SSF49899 54 152 5.77E-5 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 SMART SM00448 5 116 1.0E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.0E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 SUPERFAMILY SSF46894 132 234 9.92E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 Gene3D G3DSA:3.40.50.2300 1 125 9.5E-40 T 14-10-2018 VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 SUPERFAMILY SSF52172 3 127 1.85E-41 T 14-10-2018 IPR011006 CheY-like superfamily VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 Gene3D G3DSA:1.10.10.10 130 238 3.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0156 c9a509287aed1acc6b47ddca89a844e5 239 SMART SM00862 156 232 8.9E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 Gene3D G3DSA:3.30.70.260 294 382 1.3E-24 T 14-10-2018 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 Gene3D G3DSA:1.20.59.10 3 111 1.1E-30 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 Gene3D G3DSA:3.40.190.10 192 277 3.4E-54 T 14-10-2018 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 8 91 5.4E-28 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 SMART SM00830 12 93 2.9E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 Pfam PF00800 Prephenate dehydratase 109 290 7.5E-58 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 Pfam PF01817 Chorismate mutase type II 12 91 3.1E-16 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 SUPERFAMILY SSF48600 7 95 6.78E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 SUPERFAMILY SSF53850 108 294 3.15E-55 T 14-10-2018 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 SUPERFAMILY SSF55021 283 380 8.5E-26 T 14-10-2018 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 PIRSF PIRSF001500 1 383 1.0E-141 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VS_0556 9325ff5b94feaa91523f62b301ed2e6c 391 Gene3D G3DSA:3.40.190.10 112 286 3.4E-54 T 14-10-2018 VS_II1448 5186030b78bdea0a54de2222753a1307 215 Gene3D G3DSA:1.10.10.10 116 211 8.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1448 5186030b78bdea0a54de2222753a1307 215 Gene3D G3DSA:1.10.1740.10 33 115 3.3E-20 T 14-10-2018 VS_II1448 5186030b78bdea0a54de2222753a1307 215 SUPERFAMILY SSF88659 148 210 3.18E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VS_II1448 5186030b78bdea0a54de2222753a1307 215 Pfam PF08281 Sigma-70, region 4 155 205 1.9E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VS_II1448 5186030b78bdea0a54de2222753a1307 215 Pfam PF04542 Sigma-70 region 2 54 117 3.3E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VS_II1448 5186030b78bdea0a54de2222753a1307 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 208 8.0E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VS_II1448 5186030b78bdea0a54de2222753a1307 215 SUPERFAMILY SSF88946 36 133 2.35E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 SMART SM00028 682 715 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 SMART SM00028 648 681 0.27 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 SMART SM00028 614 647 4.4E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 Pfam PF13424 Tetratricopeptide repeat 619 678 1.1E-8 T 14-10-2018 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 Pfam PF13435 Cytochrome c554 and c-prime 70 96 0.0061 T 14-10-2018 IPR023155 Cytochrome c-552/4 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 Pfam PF13435 Cytochrome c554 and c-prime 203 241 5.5E-4 T 14-10-2018 IPR023155 Cytochrome c-552/4 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 SUPERFAMILY SSF48452 599 784 5.48E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 SUPERFAMILY SSF48695 64 605 2.1E-80 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 Gene3D G3DSA:1.10.1130.10 177 402 1.4E-18 T 14-10-2018 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 Gene3D G3DSA:1.10.1130.10 62 111 3.4E-5 T 14-10-2018 VS_II0878 ade85a56345937d2b7d8d319e8dd2059 795 Gene3D G3DSA:1.25.40.10 571 785 1.6E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0807 b4783162ec8ce47b7ae0b1691e0be307 258 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 258 26.885 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VS_0807 b4783162ec8ce47b7ae0b1691e0be307 258 Pfam PF02107 Flagellar L-ring protein 80 255 2.2E-56 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VS_0807 b4783162ec8ce47b7ae0b1691e0be307 258 PRINTS PR01008 Flagellar L-ring protein signature 221 235 2.3E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VS_0807 b4783162ec8ce47b7ae0b1691e0be307 258 PRINTS PR01008 Flagellar L-ring protein signature 200 216 2.3E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VS_0807 b4783162ec8ce47b7ae0b1691e0be307 258 PRINTS PR01008 Flagellar L-ring protein signature 237 251 2.3E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VS_0807 b4783162ec8ce47b7ae0b1691e0be307 258 PRINTS PR01008 Flagellar L-ring protein signature 102 114 2.3E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VS_0807 b4783162ec8ce47b7ae0b1691e0be307 258 PRINTS PR01008 Flagellar L-ring protein signature 174 189 2.3E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VS_0381 c3697f984045b66e897f6943101b3102 219 SUPERFAMILY SSF48498 89 206 3.56E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_0381 c3697f984045b66e897f6943101b3102 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 2.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_0381 c3697f984045b66e897f6943101b3102 219 SUPERFAMILY SSF46689 7 83 9.75E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0381 c3697f984045b66e897f6943101b3102 219 Gene3D G3DSA:1.10.357.10 1 212 1.3E-60 T 14-10-2018 VS_0381 c3697f984045b66e897f6943101b3102 219 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 422 29.16 T 14-10-2018 IPR020823 Cell division protein FtsA VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 SUPERFAMILY SSF53067 198 384 5.8E-45 T 14-10-2018 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 SUPERFAMILY SSF53067 8 221 1.57E-60 T 14-10-2018 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 PIRSF PIRSF003101 1 422 2.3E-145 T 14-10-2018 IPR020823 Cell division protein FtsA VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 Gene3D G3DSA:3.30.420.40 13 379 4.4E-111 T 14-10-2018 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 Gene3D G3DSA:3.90.640.10 235 300 4.4E-111 T 14-10-2018 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 SMART SM00842 10 196 1.9E-94 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 Gene3D G3DSA:3.30.420.40 197 359 4.4E-111 T 14-10-2018 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 Gene3D G3DSA:3.30.1490.110 87 169 4.4E-111 T 14-10-2018 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 Pfam PF14450 Cell division protein FtsA 207 381 1.4E-23 T 14-10-2018 VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-149 T 14-10-2018 IPR020823 Cell division protein FtsA VS_0453 5393a5d723ef1cdfee83e5b456bd5d31 422 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 3.7E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VS_2909 a799590a16d68c71de57aae772f3d8c0 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 3.3E-21 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VS_II1500 b19ca1fc04b423ab6271a87c46c7f0d7 536 SMART SM00283 272 533 8.6E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1500 b19ca1fc04b423ab6271a87c46c7f0d7 536 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 176 3.0E-7 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VS_II1500 b19ca1fc04b423ab6271a87c46c7f0d7 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 499 1.2E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II1500 b19ca1fc04b423ab6271a87c46c7f0d7 536 Gene3D G3DSA:1.10.287.950 208 535 4.9E-62 T 14-10-2018 VS_II1500 b19ca1fc04b423ab6271a87c46c7f0d7 536 SUPERFAMILY SSF58104 247 534 7.06E-67 T 14-10-2018 VS_0277 d404ec6b3f65b41f1ab91a5a0ce4f4c6 488 Gene3D G3DSA:2.30.40.10 56 469 9.7E-146 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_0277 d404ec6b3f65b41f1ab91a5a0ce4f4c6 488 SUPERFAMILY SSF51556 105 403 1.9E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_0277 d404ec6b3f65b41f1ab91a5a0ce4f4c6 488 Pfam PF01979 Amidohydrolase family 102 451 1.1E-68 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VS_0277 d404ec6b3f65b41f1ab91a5a0ce4f4c6 488 SUPERFAMILY SSF51338 48 474 5.01E-36 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_0277 d404ec6b3f65b41f1ab91a5a0ce4f4c6 488 Gene3D G3DSA:3.20.20.140 106 395 9.7E-146 T 14-10-2018 VS_II1346 023cc7421ca8edee8700af0722048e2a 107 Pfam PF13642 protein structure with unknown function 4 102 3.3E-36 T 14-10-2018 IPR025284 Protein of unknown function DUF4144 VS_II1346 023cc7421ca8edee8700af0722048e2a 107 Gene3D G3DSA:2.40.10.320 1 60 3.3E-7 T 14-10-2018 VS_0936 f332e79b0d85782644097cab336cc21b 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 337 1.4E-116 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 SUPERFAMILY SSF53774 3 337 3.01E-110 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 PIRSF PIRSF500176 2 334 1.6E-106 T 14-10-2018 VS_0936 f332e79b0d85782644097cab336cc21b 338 Gene3D G3DSA:3.40.50.1170 1 210 2.8E-90 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 SMART SM00870 5 325 1.7E-135 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VS_0936 f332e79b0d85782644097cab336cc21b 338 Pfam PF00710 Asparaginase, N-terminal 5 193 2.0E-65 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 PIRSF PIRSF001220 1 336 2.6E-93 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 85 95 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 Gene3D G3DSA:3.40.50.40 211 338 3.3E-45 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 8.5E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.5E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VS_0936 f332e79b0d85782644097cab336cc21b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 262 280 8.5E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VS_1095 72c745180ee396e133197b6f7054de17 268 Gene3D G3DSA:1.10.10.2260 88 194 2.2E-47 T 14-10-2018 VS_1095 72c745180ee396e133197b6f7054de17 268 Pfam PF04288 MukE-like family 10 231 4.5E-116 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VS_1095 72c745180ee396e133197b6f7054de17 268 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 48.334 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VS_1095 72c745180ee396e133197b6f7054de17 268 Gene3D G3DSA:1.10.10.2250 1 78 2.9E-34 T 14-10-2018 VS_1630 c72cd0778cd5dfeb57e2526b4898c2be 152 Gene3D G3DSA:3.40.630.30 1 152 5.2E-37 T 14-10-2018 VS_1630 c72cd0778cd5dfeb57e2526b4898c2be 152 SUPERFAMILY SSF55729 1 150 3.84E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1630 c72cd0778cd5dfeb57e2526b4898c2be 152 Pfam PF00583 Acetyltransferase (GNAT) family 28 129 5.7E-13 T 14-10-2018 IPR000182 GNAT domain VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 510 540 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 Gene3D G3DSA:2.130.10.120 76 409 5.6E-243 T 14-10-2018 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 SUPERFAMILY SSF53474 418 657 3.76E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 Pfam PF00326 Prolyl oligopeptidase family 464 679 1.8E-66 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 3.3E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 475 499 3.3E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 589 604 3.3E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 503 522 3.3E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 533 553 3.3E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 449 467 3.3E-59 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 Gene3D G3DSA:3.40.50.1820 19 648 5.6E-243 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 10 406 3.5E-118 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VS_II1395 fe2c9e36ff71f9fd682a4a909f0f8cfa 686 SUPERFAMILY SSF50993 6 413 7.06E-93 T 14-10-2018 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 Hamap MF_00195 GTPase Der [der]. 2 464 38.736 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 461 1.3E-177 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 Gene3D G3DSA:3.40.50.300 2 159 1.0E-42 T 14-10-2018 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 4.4E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 204 370 2.8E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 Gene3D G3DSA:3.40.50.300 181 378 5.4E-49 T 14-10-2018 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 SUPERFAMILY SSF52540 181 467 8.59E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 Gene3D G3DSA:3.30.300.20 381 463 2.1E-19 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 SMART SM00382 1 172 4.3 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 SMART SM00382 204 347 0.0062 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 SUPERFAMILY SSF52540 4 166 2.82E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 381 460 7.6E-25 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 Pfam PF01926 50S ribosome-binding GTPase 208 325 4.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 Pfam PF01926 50S ribosome-binding GTPase 5 119 5.7E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 PIRSF PIRSF006485 1 469 6.6E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.7E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_0623 c53805c9109b4284862c38a1d9e4efdb 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.7E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_2542 648343378a7114f40af5f86678b85873 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VS_2542 648343378a7114f40af5f86678b85873 887 Gene3D G3DSA:3.40.50.920 707 887 2.0E-70 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_2542 648343378a7114f40af5f86678b85873 887 Gene3D G3DSA:3.40.50.970 55 471 2.3E-132 T 14-10-2018 VS_2542 648343378a7114f40af5f86678b85873 887 SUPERFAMILY SSF52922 702 886 4.08E-59 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VS_2542 648343378a7114f40af5f86678b85873 887 PIRSF PIRSF000156 1 887 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VS_2542 648343378a7114f40af5f86678b85873 887 Gene3D G3DSA:3.40.50.970 472 706 3.8E-111 T 14-10-2018 VS_2542 648343378a7114f40af5f86678b85873 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.0E-5 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2542 648343378a7114f40af5f86678b85873 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 298 2.4E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VS_2542 648343378a7114f40af5f86678b85873 887 SUPERFAMILY SSF52518 56 469 1.86E-140 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_2542 648343378a7114f40af5f86678b85873 887 SUPERFAMILY SSF52518 474 701 2.12E-97 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_II0852 144f55e12cce7dcbb774bbaea19bb767 110 Gene3D G3DSA:1.20.120.160 1 110 2.1E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II0852 144f55e12cce7dcbb774bbaea19bb767 110 SUPERFAMILY SSF47226 1 108 1.28E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II0852 144f55e12cce7dcbb774bbaea19bb767 110 Pfam PF01627 Hpt domain 21 89 2.4E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_1362 da2020ca43c120763ef9e808bc52a0e8 263 SMART SM00271 2 56 8.3E-8 T 14-10-2018 IPR001623 DnaJ domain VS_1362 da2020ca43c120763ef9e808bc52a0e8 263 SUPERFAMILY SSF46565 4 64 3.66E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_1362 da2020ca43c120763ef9e808bc52a0e8 263 Gene3D G3DSA:1.10.287.110 1 93 1.3E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VS_1362 da2020ca43c120763ef9e808bc52a0e8 263 Pfam PF00226 DnaJ domain 4 46 1.7E-7 T 14-10-2018 IPR001623 DnaJ domain VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 PIRSF PIRSF002867 3 297 1.4E-84 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 Gene3D G3DSA:2.30.30.40 17 141 3.3E-24 T 14-10-2018 VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 SUPERFAMILY SSF50341 11 151 7.98E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 Gene3D G3DSA:3.40.50.2300 162 299 3.6E-22 T 14-10-2018 VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 Gene3D G3DSA:2.40.50.180 31 146 3.3E-24 T 14-10-2018 VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 SMART SM00448 173 290 1.6E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 Pfam PF00072 Response regulator receiver domain 175 289 1.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 SUPERFAMILY SSF52172 171 292 4.55E-21 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 Pfam PF01584 CheW-like domain 14 149 9.9E-31 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_II0293 c087ff79c0cad1c35c3040d775b7961b 304 SMART SM00260 11 147 1.1E-20 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_1010 e3e84be82331afdcac187555c0a6766b 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 VS_1010 e3e84be82331afdcac187555c0a6766b 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.006 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VS_1010 e3e84be82331afdcac187555c0a6766b 358 SUPERFAMILY SSF52540 85 319 1.94E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1010 e3e84be82331afdcac187555c0a6766b 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 3.4E-99 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VS_1010 e3e84be82331afdcac187555c0a6766b 358 Gene3D G3DSA:3.40.50.300 81 336 1.5E-81 T 14-10-2018 VS_1005 cdc7c13825ce5a67fbb671e37640e846 174 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.629 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB VS_1005 cdc7c13825ce5a67fbb671e37640e846 174 Gene3D G3DSA:1.20.1550.10 3 174 2.8E-58 T 14-10-2018 IPR023380 DsbB-like superfamily VS_1005 cdc7c13825ce5a67fbb671e37640e846 174 Pfam PF02600 Disulfide bond formation protein DsbB 14 160 5.6E-43 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VS_1005 cdc7c13825ce5a67fbb671e37640e846 174 SUPERFAMILY SSF158442 17 162 5.62E-43 T 14-10-2018 IPR023380 DsbB-like superfamily VS_II0728 db6d50be26e445614fe82585709e8c67 340 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 20 339 1.3E-108 T 14-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain VS_1848 dfaf13d82968a702b2545ea6086d1968 227 Pfam PF00005 ABC transporter 25 171 7.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1848 dfaf13d82968a702b2545ea6086d1968 227 Gene3D G3DSA:3.40.50.300 3 227 1.2E-57 T 14-10-2018 VS_1848 dfaf13d82968a702b2545ea6086d1968 227 SUPERFAMILY SSF52540 5 221 8.75E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1848 dfaf13d82968a702b2545ea6086d1968 227 SMART SM00382 34 222 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1115 5c58e0e025b80cff23cd285282569203 336 Gene3D G3DSA:3.40.190.10 169 277 2.3E-23 T 14-10-2018 VS_II1115 5c58e0e025b80cff23cd285282569203 336 Gene3D G3DSA:1.10.10.10 10 99 2.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1115 5c58e0e025b80cff23cd285282569203 336 SUPERFAMILY SSF53850 95 304 1.41E-15 T 14-10-2018 VS_II1115 5c58e0e025b80cff23cd285282569203 336 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 2.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1115 5c58e0e025b80cff23cd285282569203 336 Pfam PF03466 LysR substrate binding domain 93 306 1.5E-12 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1115 5c58e0e025b80cff23cd285282569203 336 SUPERFAMILY SSF46785 10 88 7.39E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1115 5c58e0e025b80cff23cd285282569203 336 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1115 5c58e0e025b80cff23cd285282569203 336 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1115 5c58e0e025b80cff23cd285282569203 336 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1115 5c58e0e025b80cff23cd285282569203 336 Gene3D G3DSA:3.40.190.10 105 302 2.3E-23 T 14-10-2018 VS_II0412 be271364563e95600086e251d9d70006 260 SUPERFAMILY SSF63380 4 116 2.87E-12 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_II0412 be271364563e95600086e251d9d70006 260 Gene3D G3DSA:3.40.50.80 122 259 6.4E-44 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VS_II0412 be271364563e95600086e251d9d70006 260 Gene3D G3DSA:2.40.30.10 1 118 6.0E-31 T 14-10-2018 VS_II0412 be271364563e95600086e251d9d70006 260 Pfam PF08021 Siderophore-interacting FAD-binding domain 10 117 2.5E-28 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VS_II0412 be271364563e95600086e251d9d70006 260 Pfam PF04954 Siderophore-interacting protein 127 241 6.3E-32 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VS_II0791 7bb88c2ab3872353d0426754ef435741 85 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 7 80 8.3E-29 T 14-10-2018 IPR018680 Protein of unknown function DUF2164 VS_1216 be92c739d546a01a25815240490cfd9b 515 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 144 160 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VS_1216 be92c739d546a01a25815240490cfd9b 515 Pfam PF00221 Aromatic amino acid lyase 16 475 3.5E-187 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VS_1216 be92c739d546a01a25815240490cfd9b 515 Gene3D G3DSA:1.20.200.10 203 513 3.4E-122 T 14-10-2018 VS_1216 be92c739d546a01a25815240490cfd9b 515 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 8 509 43.762 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1216 be92c739d546a01a25815240490cfd9b 515 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 11 505 1.9E-212 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VS_1216 be92c739d546a01a25815240490cfd9b 515 Gene3D G3DSA:1.10.275.10 8 202 3.3E-68 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VS_1216 be92c739d546a01a25815240490cfd9b 515 SUPERFAMILY SSF48557 10 509 7.22E-190 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VS_II0310 cd7eebbda825c203470f00f562c902f7 331 Pfam PF13609 Gram-negative porin 10 302 3.4E-17 T 14-10-2018 VS_II0310 cd7eebbda825c203470f00f562c902f7 331 SUPERFAMILY SSF56935 24 331 1.16E-42 T 14-10-2018 VS_II0310 cd7eebbda825c203470f00f562c902f7 331 Gene3D G3DSA:2.40.160.10 24 331 1.4E-58 T 14-10-2018 IPR023614 Porin domain superfamily VS_II0767 c3c63ff4e82a190bf117fb01ef751c82 302 SUPERFAMILY SSF103481 72 150 1.83E-6 T 14-10-2018 VS_II0767 c3c63ff4e82a190bf117fb01ef751c82 302 SUPERFAMILY SSF103481 201 298 1.57E-11 T 14-10-2018 VS_II0767 c3c63ff4e82a190bf117fb01ef751c82 302 Pfam PF00892 EamA-like transporter family 160 295 1.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0767 c3c63ff4e82a190bf117fb01ef751c82 302 Pfam PF00892 EamA-like transporter family 5 147 1.6E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_2107 1d8bd680abd9d407a104178c8256d7f0 101 Gene3D G3DSA:3.30.70.100 1 101 2.2E-40 T 14-10-2018 VS_2107 1d8bd680abd9d407a104178c8256d7f0 101 SUPERFAMILY SSF54909 1 95 7.51E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_2107 1d8bd680abd9d407a104178c8256d7f0 101 Pfam PF08803 Putative mono-oxygenase ydhR 3 98 3.0E-41 T 14-10-2018 IPR014910 Putative monooxygenase YdhR VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 Gene3D G3DSA:1.10.530.10 105 346 5.1E-76 T 14-10-2018 VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 Gene3D G3DSA:3.30.20.10 178 248 5.1E-76 T 14-10-2018 VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 Pfam PF02839 Carbohydrate binding domain 451 473 1.6E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 SUPERFAMILY SSF53955 87 350 2.5E-52 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 Gene3D G3DSA:2.10.10.20 434 476 4.9E-17 T 14-10-2018 VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 SUPERFAMILY SSF51055 435 476 1.7E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 SMART SM00495 522 567 0.13 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 SMART SM00495 434 476 3.7E-14 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VS_0630 f74ec60b3214d847ff0b0e269c3c4056 570 Pfam PF00182 Chitinase class I 106 325 1.7E-31 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VS_1176 e48f5df528a7a54892879c1100229793 91 Pfam PF03206 Nitrogen fixation protein NifW 7 73 3.2E-5 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 VS_0806 a6cde5b2cb7ed898a66df821e0a606ee 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 6.5E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VS_0806 a6cde5b2cb7ed898a66df821e0a606ee 262 Pfam PF00460 Flagella basal body rod protein 5 35 9.0E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VS_0806 a6cde5b2cb7ed898a66df821e0a606ee 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.9E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VS_0806 a6cde5b2cb7ed898a66df821e0a606ee 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.2E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VS_0806 a6cde5b2cb7ed898a66df821e0a606ee 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 2.4E-116 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VS_0806 a6cde5b2cb7ed898a66df821e0a606ee 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VS_0806 a6cde5b2cb7ed898a66df821e0a606ee 262 SUPERFAMILY SSF117143 92 223 3.27E-35 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VS_II0859 995a422a73359375c1319f73a2c7d532 743 SUPERFAMILY SSF52172 617 737 8.68E-30 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0859 995a422a73359375c1319f73a2c7d532 743 Pfam PF00072 Response regulator receiver domain 620 734 5.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0859 995a422a73359375c1319f73a2c7d532 743 Gene3D G3DSA:3.40.50.2300 603 741 9.3E-34 T 14-10-2018 VS_II0859 995a422a73359375c1319f73a2c7d532 743 SMART SM00448 617 733 9.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0468 4f32f09541b0b330089a14bf12907931 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 3.5E-98 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_0468 4f32f09541b0b330089a14bf12907931 231 Gene3D G3DSA:3.40.50.1580 1 231 1.2E-70 T 14-10-2018 VS_0468 4f32f09541b0b330089a14bf12907931 231 SUPERFAMILY SSF53167 1 230 1.01E-71 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VS_0468 4f32f09541b0b330089a14bf12907931 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.5E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VS_0468 4f32f09541b0b330089a14bf12907931 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.258 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_II0360 e7fedac324440dd086db91fac5ab311d 454 SUPERFAMILY SSF53067 5 209 1.1E-25 T 14-10-2018 VS_II0360 e7fedac324440dd086db91fac5ab311d 454 Gene3D G3DSA:3.90.640.10 339 388 5.2E-9 T 14-10-2018 VS_II0360 e7fedac324440dd086db91fac5ab311d 454 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 217 230 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VS_II0360 e7fedac324440dd086db91fac5ab311d 454 Gene3D G3DSA:3.30.420.40 389 434 5.2E-9 T 14-10-2018 VS_II0360 e7fedac324440dd086db91fac5ab311d 454 SUPERFAMILY SSF53067 211 451 5.06E-31 T 14-10-2018 VS_II0360 e7fedac324440dd086db91fac5ab311d 454 Pfam PF00012 Hsp70 protein 133 262 7.2E-11 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VS_0923 3b9d3b63b43da3004a11006017e660a6 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 40.978 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VS_0923 3b9d3b63b43da3004a11006017e660a6 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 5.1E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VS_0923 3b9d3b63b43da3004a11006017e660a6 145 PIRSF PIRSF006173 1 144 3.2E-64 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VS_2537 e97be36f5df898438cf16886a0481fa0 219 SUPERFAMILY SSF53056 2 211 2.62E-72 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VS_2537 e97be36f5df898438cf16886a0481fa0 219 Gene3D G3DSA:3.40.1050.10 1 217 5.6E-85 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VS_2537 e97be36f5df898438cf16886a0481fa0 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VS_2537 e97be36f5df898438cf16886a0481fa0 219 SMART SM00947 30 192 5.9E-64 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VS_2537 e97be36f5df898438cf16886a0481fa0 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VS_2537 e97be36f5df898438cf16886a0481fa0 219 Pfam PF00484 Carbonic anhydrase 38 188 2.4E-49 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VS_2588 0f0f361144034b23e0c1da1dfd3bbceb 346 Gene3D G3DSA:2.160.10.10 99 296 1.1E-54 T 14-10-2018 VS_2588 0f0f361144034b23e0c1da1dfd3bbceb 346 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 313 1.7E-73 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VS_2588 0f0f361144034b23e0c1da1dfd3bbceb 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 209 240 4.2E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VS_2588 0f0f361144034b23e0c1da1dfd3bbceb 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 140 3.9E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VS_2588 0f0f361144034b23e0c1da1dfd3bbceb 346 Gene3D G3DSA:3.40.1390.10 1 92 1.2E-6 T 14-10-2018 VS_2588 0f0f361144034b23e0c1da1dfd3bbceb 346 SUPERFAMILY SSF51161 106 302 1.09E-55 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_1550 28c0378e7b9094da25de545570cd2e0e 224 SUPERFAMILY SSF56784 8 215 2.71E-44 T 14-10-2018 IPR036412 HAD-like superfamily VS_1550 28c0378e7b9094da25de545570cd2e0e 224 Gene3D G3DSA:3.40.50.1000 12 200 2.2E-43 T 14-10-2018 IPR023214 HAD superfamily VS_1550 28c0378e7b9094da25de545570cd2e0e 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 190 2.7E-32 T 14-10-2018 VS_1550 28c0378e7b9094da25de545570cd2e0e 224 Gene3D G3DSA:1.10.150.240 21 90 2.2E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_1550 28c0378e7b9094da25de545570cd2e0e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 103 116 2.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_1550 28c0378e7b9094da25de545570cd2e0e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 2.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_1550 28c0378e7b9094da25de545570cd2e0e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 2.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_1550 28c0378e7b9094da25de545570cd2e0e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 2.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_1550 28c0378e7b9094da25de545570cd2e0e 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 190 9.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_3009 316f71805d2953d62a21a41dd2b72749 807 SUPERFAMILY SSF69593 241 488 1.14E-25 T 14-10-2018 VS_3009 316f71805d2953d62a21a41dd2b72749 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.579 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VS_3009 316f71805d2953d62a21a41dd2b72749 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VS_3009 316f71805d2953d62a21a41dd2b72749 807 PIRSF PIRSF500064 2 807 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VS_3009 316f71805d2953d62a21a41dd2b72749 807 Pfam PF01553 Acyltransferase 288 424 1.4E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_3009 316f71805d2953d62a21a41dd2b72749 807 SMART SM00563 300 427 2.2E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_3009 316f71805d2953d62a21a41dd2b72749 807 PIRSF PIRSF000437 19 807 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VS_1078 2ebf68314c57032bed3b2724c8460764 151 Pfam PF05433 Glycine zipper 2TM domain 56 93 9.2E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VS_II0989 87d8d8379d392efa0ad2620bec73ff95 200 SUPERFAMILY SSF56925 65 142 2.49E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_1753 3effee7464dc48fb37bc07ef70ed5d24 293 Gene3D G3DSA:3.40.1090.20 128 209 7.2E-6 T 14-10-2018 VS_1753 3effee7464dc48fb37bc07ef70ed5d24 293 SUPERFAMILY SSF52151 6 283 8.89E-51 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_1753 3effee7464dc48fb37bc07ef70ed5d24 293 Pfam PF01734 Patatin-like phospholipase 10 167 1.5E-20 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VS_1753 3effee7464dc48fb37bc07ef70ed5d24 293 Gene3D G3DSA:3.40.1090.10 2 107 1.3E-21 T 14-10-2018 VS_1229 10a6362598ae08855933cf9b7529e668 156 SUPERFAMILY SSF54364 1 63 3.14E-23 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VS_1229 10a6362598ae08855933cf9b7529e668 156 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 156 25.534 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VS_1229 10a6362598ae08855933cf9b7529e668 156 Gene3D G3DSA:3.30.110.10 61 156 1.2E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VS_1229 10a6362598ae08855933cf9b7529e668 156 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 61 9.4E-24 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VS_1229 10a6362598ae08855933cf9b7529e668 156 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 154 2.3E-36 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VS_1229 10a6362598ae08855933cf9b7529e668 156 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VS_1229 10a6362598ae08855933cf9b7529e668 156 Gene3D G3DSA:3.10.20.80 1 60 1.0E-24 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VS_1229 10a6362598ae08855933cf9b7529e668 156 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 156 3.2E-68 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VS_1229 10a6362598ae08855933cf9b7529e668 156 SUPERFAMILY SSF55200 68 156 3.79E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VS_II0600 37995e1df5c585bdb6f744be54431e43 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_II0600 37995e1df5c585bdb6f744be54431e43 159 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_II0600 37995e1df5c585bdb6f744be54431e43 159 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 15 154 1.1E-42 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VS_II0600 37995e1df5c585bdb6f744be54431e43 159 Gene3D G3DSA:3.30.70.20 30 82 7.9E-10 T 14-10-2018 VS_II0600 37995e1df5c585bdb6f744be54431e43 159 Pfam PF00037 4Fe-4S binding domain 133 154 1.0E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_II0600 37995e1df5c585bdb6f744be54431e43 159 Gene3D G3DSA:3.30.70.20 94 157 2.5E-10 T 14-10-2018 VS_II0600 37995e1df5c585bdb6f744be54431e43 159 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 158 23.636 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VS_II0600 37995e1df5c585bdb6f744be54431e43 159 SUPERFAMILY SSF54862 30 156 2.51E-19 T 14-10-2018 VS_II0600 37995e1df5c585bdb6f744be54431e43 159 Pfam PF13187 4Fe-4S dicluster domain 34 79 2.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_0842 c1dea462e06719b21ddb5e78ed71811b 203 PIRSF PIRSF002884 1 203 1.7E-84 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VS_0842 c1dea462e06719b21ddb5e78ed71811b 203 Pfam PF04344 Chemotaxis phosphatase, CheZ 1 203 3.6E-75 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VS_0842 c1dea462e06719b21ddb5e78ed71811b 203 SUPERFAMILY SSF75708 1 202 1.22E-63 T 14-10-2018 VS_0842 c1dea462e06719b21ddb5e78ed71811b 203 Gene3D G3DSA:1.10.287.500 19 153 4.5E-45 T 14-10-2018 VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 SUPERFAMILY SSF46785 10 67 7.86E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 Gene3D G3DSA:3.30.70.920 74 146 1.2E-14 T 14-10-2018 VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 SMART SM00344 10 116 2.7E-22 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 SUPERFAMILY SSF54909 75 149 3.62E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 Gene3D G3DSA:1.10.10.10 3 63 9.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 6.9E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 2.3E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 2.3E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 2.3E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VS_II0992 b20d0c5d55791369208b0cb61e95210a 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 1.0E-10 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VS_2674 e4cf35baa75ce47104a210322ca1b72e 243 Pfam PF04231 Endonuclease I 47 240 2.5E-48 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 VS_2674 e4cf35baa75ce47104a210322ca1b72e 243 SUPERFAMILY SSF54060 33 242 1.41E-93 T 14-10-2018 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 240 257 6.4E-38 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 312 325 6.4E-38 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 290 308 6.4E-38 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 159 176 6.4E-38 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 188 209 6.4E-38 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 124 144 6.4E-38 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 29 161 9.7E-15 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 Gene3D G3DSA:3.20.20.80 163 448 2.7E-85 T 14-10-2018 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 SUPERFAMILY SSF55545 30 164 1.33E-25 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 Gene3D G3DSA:3.20.20.80 541 635 4.7E-13 T 14-10-2018 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 SUPERFAMILY SSF51445 165 617 2.41E-96 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 165 604 3.0E-102 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VS_II0041 31544c7f57dfc9ff3bc1ae792191f5e5 816 Gene3D G3DSA:3.30.379.10 15 161 3.8E-22 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VS_II0716 ccd2a1e1df432ff99cc20b34db7210dd 228 SUPERFAMILY SSF50630 92 223 1.97E-39 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_II0716 ccd2a1e1df432ff99cc20b34db7210dd 228 Pfam PF05618 Putative ATP-dependant zinc protease 92 225 5.9E-42 T 14-10-2018 VS_II0716 ccd2a1e1df432ff99cc20b34db7210dd 228 Gene3D G3DSA:2.40.70.10 89 216 6.4E-39 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_1868 845cb1d5610e9f5afd6fe3525b9639da 147 SUPERFAMILY SSF51316 3 139 2.3E-33 T 14-10-2018 IPR011057 Mss4-like superfamily VS_1868 845cb1d5610e9f5afd6fe3525b9639da 147 Gene3D G3DSA:2.170.150.70 3 119 6.5E-15 T 14-10-2018 VS_1868 845cb1d5610e9f5afd6fe3525b9639da 147 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 112 7.6E-16 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 Gene3D G3DSA:3.20.20.70 10 252 8.2E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 12 327 3.6E-158 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 SUPERFAMILY SSF51395 12 325 1.71E-75 T 14-10-2018 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 Pfam PF01207 Dihydrouridine synthase (Dus) 16 323 1.7E-92 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 PIRSF PIRSF006621 3 331 1.5E-72 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 Gene3D G3DSA:1.20.120.1460 255 331 3.2E-22 T 14-10-2018 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 329 53.294 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VS_0294 06d9be4d2e73b52edc878ffcafbcb06a 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VS_II0405 e9c3625dfd112217a8f54e4677651a22 338 Gene3D G3DSA:3.40.190.170 26 338 2.2E-101 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VS_II0405 e9c3625dfd112217a8f54e4677651a22 338 SUPERFAMILY SSF53850 122 260 9.19E-5 T 14-10-2018 VS_II0405 e9c3625dfd112217a8f54e4677651a22 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 315 8.0E-48 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VS_0207 87bd448c8508a11aabf12de95ff04f34 144 SMART SM00450 40 138 2.6E-22 T 14-10-2018 IPR001763 Rhodanese-like domain VS_0207 87bd448c8508a11aabf12de95ff04f34 144 Gene3D G3DSA:3.40.250.10 21 143 4.0E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_0207 87bd448c8508a11aabf12de95ff04f34 144 Pfam PF00581 Rhodanese-like domain 43 135 4.8E-19 T 14-10-2018 IPR001763 Rhodanese-like domain VS_0207 87bd448c8508a11aabf12de95ff04f34 144 SUPERFAMILY SSF52821 16 142 1.22E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_2195 a9abeb3a912443562886865c6069386c 194 Pfam PF13023 HD domain 11 160 2.1E-14 T 14-10-2018 IPR006674 HD domain VS_2195 a9abeb3a912443562886865c6069386c 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 184 5.0E-42 T 14-10-2018 VS_2195 a9abeb3a912443562886865c6069386c 194 SMART SM00471 26 151 1.7E-6 T 14-10-2018 IPR003607 HD/PDEase domain VS_2195 a9abeb3a912443562886865c6069386c 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.01 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VS_2195 a9abeb3a912443562886865c6069386c 194 SUPERFAMILY SSF109604 2 193 2.48E-43 T 14-10-2018 VS_2195 a9abeb3a912443562886865c6069386c 194 Gene3D G3DSA:1.10.3210.10 1 194 1.2E-84 T 14-10-2018 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 31.824 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.5E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 SUPERFAMILY SSF48163 302 465 3.14E-44 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 Gene3D G3DSA:3.40.50.620 2 317 3.5E-132 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0769 95bcf9056e80b18158e602d61b8c992a 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 3.9E-114 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 2.2E-193 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 Gene3D G3DSA:1.10.10.350 369 473 6.9E-23 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VS_0769 95bcf9056e80b18158e602d61b8c992a 475 SUPERFAMILY SSF52374 3 301 1.26E-107 T 14-10-2018 VS_II0072 ba20e99814c39f64086fbb5eeb6f501e 191 SUPERFAMILY SSF51161 8 188 1.94E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_II0072 ba20e99814c39f64086fbb5eeb6f501e 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 142 170 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VS_II0072 ba20e99814c39f64086fbb5eeb6f501e 191 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 133 167 3.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VS_II0072 ba20e99814c39f64086fbb5eeb6f501e 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 109 5.4E-4 T 14-10-2018 IPR001451 Hexapeptide repeat VS_II0072 ba20e99814c39f64086fbb5eeb6f501e 191 Pfam PF12464 Maltose acetyltransferase 12 61 3.3E-9 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VS_II0072 ba20e99814c39f64086fbb5eeb6f501e 191 Gene3D G3DSA:2.160.10.10 2 190 3.0E-66 T 14-10-2018 VS_II0072 ba20e99814c39f64086fbb5eeb6f501e 191 SMART SM01266 10 62 6.3E-13 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VS_II1078 67fabaa502aaef1c18f1c94037b77615 51 SUPERFAMILY SSF46689 5 49 5.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1078 67fabaa502aaef1c18f1c94037b77615 51 Pfam PF12833 Helix-turn-helix domain 5 47 1.9E-9 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1078 67fabaa502aaef1c18f1c94037b77615 51 Gene3D G3DSA:1.10.10.2730 4 48 9.0E-13 T 14-10-2018 VS_II1078 67fabaa502aaef1c18f1c94037b77615 51 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 15 30 4.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II1078 67fabaa502aaef1c18f1c94037b77615 51 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 30 46 4.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VS_II0866 e37b7662dd18087a13c799c294153683 350 SUPERFAMILY SSF56935 26 350 1.32E-26 T 14-10-2018 VS_II0866 e37b7662dd18087a13c799c294153683 350 Gene3D G3DSA:2.40.160.10 86 341 1.8E-8 T 14-10-2018 IPR023614 Porin domain superfamily VS_0133 02c512efa96a087f6e0a77f9c694f0ee 128 SMART SM00363 8 71 8.5E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0133 02c512efa96a087f6e0a77f9c694f0ee 128 Gene3D G3DSA:3.10.290.10 1 107 1.5E-38 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_0133 02c512efa96a087f6e0a77f9c694f0ee 128 PIRSF PIRSF016821 5 128 4.1E-41 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VS_0133 02c512efa96a087f6e0a77f9c694f0ee 128 Pfam PF01479 S4 domain 8 54 3.9E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0133 02c512efa96a087f6e0a77f9c694f0ee 128 SUPERFAMILY SSF55174 8 104 6.54E-31 T 14-10-2018 VS_2071 bbdcf31210ead3f8d4ba68b6c671a5a9 181 Gene3D G3DSA:3.40.630.30 1 178 4.6E-46 T 14-10-2018 VS_2071 bbdcf31210ead3f8d4ba68b6c671a5a9 181 Pfam PF13302 Acetyltransferase (GNAT) domain 12 153 2.6E-21 T 14-10-2018 IPR000182 GNAT domain VS_2071 bbdcf31210ead3f8d4ba68b6c671a5a9 181 SUPERFAMILY SSF55729 3 177 5.59E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2978 a4576f4536a761fc7da703b44fd63065 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 234 4.6E-11 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VS_2978 a4576f4536a761fc7da703b44fd63065 307 Gene3D G3DSA:3.40.50.300 1 307 5.9E-89 T 14-10-2018 VS_2978 a4576f4536a761fc7da703b44fd63065 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 7.0E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VS_2978 a4576f4536a761fc7da703b44fd63065 307 PIRSF PIRSF000545 1 307 7.4E-143 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VS_2978 a4576f4536a761fc7da703b44fd63065 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 173.565 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VS_2978 a4576f4536a761fc7da703b44fd63065 307 SUPERFAMILY SSF52540 3 307 2.11E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0803 0e3c8462754a926db1983fe632789631 474 SMART SM00283 212 473 3.5E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0803 0e3c8462754a926db1983fe632789631 474 SUPERFAMILY SSF58104 164 473 4.58E-65 T 14-10-2018 VS_II0803 0e3c8462754a926db1983fe632789631 474 Gene3D G3DSA:1.10.287.950 149 474 1.4E-64 T 14-10-2018 VS_II0803 0e3c8462754a926db1983fe632789631 474 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 274 437 2.0E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_II0803 0e3c8462754a926db1983fe632789631 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 339 368 2.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II0803 0e3c8462754a926db1983fe632789631 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 233 262 2.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_II0803 0e3c8462754a926db1983fe632789631 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 337 2.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VS_0090 1a80bc93028cbe5df2ad6b1761a01c31 151 Pfam PF00582 Universal stress protein family 10 145 2.1E-22 T 14-10-2018 IPR006016 UspA VS_0090 1a80bc93028cbe5df2ad6b1761a01c31 151 SUPERFAMILY SSF52402 10 146 2.93E-33 T 14-10-2018 VS_0090 1a80bc93028cbe5df2ad6b1761a01c31 151 Gene3D G3DSA:3.40.50.620 9 149 4.9E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0090 1a80bc93028cbe5df2ad6b1761a01c31 151 PIRSF PIRSF006276 8 148 4.6E-52 T 14-10-2018 IPR006015 Universal stress protein A VS_1199 5ecff02d28d22a8ceaa722ead97ebcdc 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 456 1.0E-113 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VS_1199 5ecff02d28d22a8ceaa722ead97ebcdc 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 41 456 9.3E-60 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VS_1199 5ecff02d28d22a8ceaa722ead97ebcdc 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 VS_1945 5fed9d68b8ca8f6d243858fe3330eb3a 383 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 12 376 7.4E-162 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VS_1945 5fed9d68b8ca8f6d243858fe3330eb3a 383 Gene3D G3DSA:3.20.20.10 21 248 4.4E-142 T 14-10-2018 IPR029066 PLP-binding barrel VS_1945 5fed9d68b8ca8f6d243858fe3330eb3a 383 SUPERFAMILY SSF50621 218 365 2.3E-22 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_1945 5fed9d68b8ca8f6d243858fe3330eb3a 383 SUPERFAMILY SSF51419 20 248 3.49E-42 T 14-10-2018 IPR029066 PLP-binding barrel VS_1945 5fed9d68b8ca8f6d243858fe3330eb3a 383 PIRSF PIRSF038941 3 378 8.5E-128 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VS_1945 5fed9d68b8ca8f6d243858fe3330eb3a 383 Gene3D G3DSA:2.40.37.10 13 378 4.4E-142 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VS_1784 b6e9188c85b518a3ff085bf182793ff7 176 Pfam PF00929 Exonuclease 7 171 7.5E-10 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_1784 b6e9188c85b518a3ff085bf182793ff7 176 Gene3D G3DSA:3.30.420.10 1 176 2.4E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1784 b6e9188c85b518a3ff085bf182793ff7 176 SMART SM00479 5 176 4.6E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VS_1784 b6e9188c85b518a3ff085bf182793ff7 176 SUPERFAMILY SSF53098 4 175 1.01E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2592 a69ebe41ad1bdfa29f50bc82d771a1f6 289 Gene3D G3DSA:1.10.3720.10 13 276 2.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily VS_2592 a69ebe41ad1bdfa29f50bc82d771a1f6 289 SUPERFAMILY SSF161098 19 288 5.23E-66 T 14-10-2018 IPR035906 MetI-like superfamily VS_2592 a69ebe41ad1bdfa29f50bc82d771a1f6 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 272 1.9E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0542 828533d5ec41f3f93cde834daea73422 172 Gene3D G3DSA:3.40.630.30 2 169 3.8E-28 T 14-10-2018 VS_II0542 828533d5ec41f3f93cde834daea73422 172 SUPERFAMILY SSF55729 3 167 3.98E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0542 828533d5ec41f3f93cde834daea73422 172 Pfam PF13302 Acetyltransferase (GNAT) domain 4 144 9.1E-17 T 14-10-2018 IPR000182 GNAT domain VS_II0868 66a8a725d8f9bfe60c79da439208f45a 443 SUPERFAMILY SSF102114 24 372 1.44E-38 T 14-10-2018 VS_II0868 66a8a725d8f9bfe60c79da439208f45a 443 Pfam PF04055 Radical SAM superfamily 24 196 1.4E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VS_II0868 66a8a725d8f9bfe60c79da439208f45a 443 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 1.9E-7 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VS_II0868 66a8a725d8f9bfe60c79da439208f45a 443 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 195 305 1.0E-5 T 14-10-2018 VS_II0868 66a8a725d8f9bfe60c79da439208f45a 443 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 1.3E-18 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VS_II0868 66a8a725d8f9bfe60c79da439208f45a 443 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 5.9E-149 T 14-10-2018 VS_II0868 66a8a725d8f9bfe60c79da439208f45a 443 Gene3D G3DSA:3.20.20.70 15 412 9.6E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2312 bd62c7eb3d95a5758474b40a86be9b66 116 SUPERFAMILY SSF52833 2 116 3.27E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2312 bd62c7eb3d95a5758474b40a86be9b66 116 Gene3D G3DSA:3.40.30.10 1 116 1.5E-46 T 14-10-2018 VS_2312 bd62c7eb3d95a5758474b40a86be9b66 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 9.4E-45 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VS_2312 bd62c7eb3d95a5758474b40a86be9b66 116 Pfam PF03960 ArsC family 6 115 1.9E-16 T 14-10-2018 IPR006660 Arsenate reductase-like VS_II1204 d789441d8160aab4adf09421cee86675 359 SUPERFAMILY SSF56281 97 324 3.05E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_II1204 d789441d8160aab4adf09421cee86675 359 Pfam PF12706 Beta-lactamase superfamily domain 114 307 2.1E-43 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_II1204 d789441d8160aab4adf09421cee86675 359 Gene3D G3DSA:3.60.15.10 79 351 3.5E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_2066 9acff27ba9e5d360a0ed38e0855809a2 230 SMART SM00382 33 221 7.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2066 9acff27ba9e5d360a0ed38e0855809a2 230 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2066 9acff27ba9e5d360a0ed38e0855809a2 230 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 223 1.7E-108 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 VS_2066 9acff27ba9e5d360a0ed38e0855809a2 230 SUPERFAMILY SSF52540 5 227 3.22E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2066 9acff27ba9e5d360a0ed38e0855809a2 230 Pfam PF00005 ABC transporter 24 172 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2066 9acff27ba9e5d360a0ed38e0855809a2 230 Gene3D G3DSA:3.40.50.300 1 230 4.5E-65 T 14-10-2018 VS_2845 211f4419c77b4b609ec80151d265a05f 321 Gene3D G3DSA:3.60.20.30 186 321 7.8E-46 T 14-10-2018 VS_2845 211f4419c77b4b609ec80151d265a05f 321 Pfam PF01112 Asparaginase 7 318 1.2E-108 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VS_2845 211f4419c77b4b609ec80151d265a05f 321 SUPERFAMILY SSF56235 5 317 1.32E-95 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 SUPERFAMILY SSF53448 4 358 1.15E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 47.631 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 SUPERFAMILY SSF51161 292 398 2.5E-14 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 Gene3D G3DSA:3.90.550.10 2 286 2.5E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 Pfam PF00483 Nucleotidyl transferase 6 273 1.5E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 Gene3D G3DSA:2.160.10.10 287 403 3.5E-31 T 14-10-2018 VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 5.4E-150 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_1082 4aafd58d97c56e6e9fe6143e4132a58b 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_0004 c480c19eebff82da8a1dbcf8dfc7fde5 85 SMART SM01234 8 75 3.8E-39 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VS_0004 c480c19eebff82da8a1dbcf8dfc7fde5 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 1.0E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VS_0004 c480c19eebff82da8a1dbcf8dfc7fde5 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 23.851 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VS_0004 c480c19eebff82da8a1dbcf8dfc7fde5 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 16 82 5.7E-30 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VS_0004 c480c19eebff82da8a1dbcf8dfc7fde5 85 Pfam PF01809 Haemolytic domain 11 75 1.3E-27 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.9E-142 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 Pfam PF01264 Chorismate synthase 10 345 8.4E-143 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 Gene3D G3DSA:3.60.150.10 1 360 2.3E-159 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.523 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 SUPERFAMILY SSF103263 4 353 8.24E-149 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_0892 2c6ae74737c1bd50815c3808c07eb581 361 PIRSF PIRSF001456 3 360 2.5E-142 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VS_1054 4d59405cbed967eb081461e98e927e6d 256 Pfam PF00005 ABC transporter 22 181 3.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1054 4d59405cbed967eb081461e98e927e6d 256 SUPERFAMILY SSF52540 7 251 1.65E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1054 4d59405cbed967eb081461e98e927e6d 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1054 4d59405cbed967eb081461e98e927e6d 256 Gene3D G3DSA:3.40.50.300 4 255 3.8E-74 T 14-10-2018 VS_1054 4d59405cbed967eb081461e98e927e6d 256 PIRSF PIRSF039085 3 256 8.8E-117 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VS_1054 4d59405cbed967eb081461e98e927e6d 256 SMART SM00382 31 229 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0269 8b743198ef2bbbaf85709aa672d617e1 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 1.9E-113 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VS_0269 8b743198ef2bbbaf85709aa672d617e1 310 Gene3D G3DSA:1.10.20.140 115 186 1.1E-105 T 14-10-2018 VS_0269 8b743198ef2bbbaf85709aa672d617e1 310 Gene3D G3DSA:3.40.50.300 12 292 1.1E-105 T 14-10-2018 VS_0269 8b743198ef2bbbaf85709aa672d617e1 310 SUPERFAMILY SSF52540 10 152 2.73E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0269 8b743198ef2bbbaf85709aa672d617e1 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 29.932 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VS_0269 8b743198ef2bbbaf85709aa672d617e1 310 Pfam PF01715 IPP transferase 42 287 5.3E-85 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.4E-10 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 SUPERFAMILY SSF117143 78 395 3.27E-66 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 Gene3D G3DSA:2.60.98.20 154 318 4.8E-23 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 1.5E-91 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 356 433 2.0E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 2.1E-21 T 14-10-2018 IPR011491 Flagellar hook protein FlgE VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 PRINTS PR01005 Flagellar hook-associated protein signature 8 31 3.0E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_0804 52cced9b8512166cf1d8fd64c7e3ea98 434 PRINTS PR01005 Flagellar hook-associated protein signature 239 261 3.0E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_3144 c38a0e877727de4a7346859c69b3597c 94 Gene3D G3DSA:3.30.70.260 1 89 4.4E-10 T 14-10-2018 VS_3144 c38a0e877727de4a7346859c69b3597c 94 SUPERFAMILY SSF55021 3 75 2.24E-9 T 14-10-2018 VS_3144 c38a0e877727de4a7346859c69b3597c 94 Pfam PF13710 ACT domain 12 73 1.4E-20 T 14-10-2018 VS_3144 c38a0e877727de4a7346859c69b3597c 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 0.003 T 14-10-2018 VS_2677 683ff3cc06f6b6a76447d2185316c9b4 243 Gene3D G3DSA:2.40.240.20 1 70 1.4E-21 T 14-10-2018 VS_2677 683ff3cc06f6b6a76447d2185316c9b4 243 SUPERFAMILY SSF75217 75 242 1.62E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_2677 683ff3cc06f6b6a76447d2185316c9b4 243 Gene3D G3DSA:3.40.1280.10 74 243 1.3E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_2677 683ff3cc06f6b6a76447d2185316c9b4 243 PIRSF PIRSF015601 2 242 4.7E-53 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VS_2677 683ff3cc06f6b6a76447d2185316c9b4 243 SUPERFAMILY SSF88697 2 70 2.49E-16 T 14-10-2018 IPR015947 PUA-like superfamily VS_2677 683ff3cc06f6b6a76447d2185316c9b4 243 Pfam PF04452 RNA methyltransferase 20 236 2.9E-73 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VS_2677 683ff3cc06f6b6a76447d2185316c9b4 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 8.1E-84 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VS_0931 c5847d5713af0683b693bcffdd7cf5ba 294 SUPERFAMILY SSF74650 7 287 6.28E-74 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VS_0931 c5847d5713af0683b693bcffdd7cf5ba 294 PIRSF PIRSF016020 8 294 3.5E-66 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VS_0931 c5847d5713af0683b693bcffdd7cf5ba 294 Gene3D G3DSA:2.70.98.10 2 293 1.7E-88 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VS_0931 c5847d5713af0683b693bcffdd7cf5ba 294 Pfam PF01263 Aldose 1-epimerase 26 291 1.8E-51 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VS_0140 5d42badf61b9760d5674113d88aea96b 131 SUPERFAMILY SSF54523 51 129 3.73E-21 T 14-10-2018 VS_0140 5d42badf61b9760d5674113d88aea96b 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 38 3.7E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0140 5d42badf61b9760d5674113d88aea96b 131 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 40 1.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0140 5d42badf61b9760d5674113d88aea96b 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0140 5d42badf61b9760d5674113d88aea96b 131 Pfam PF02501 Type II secretion system (T2SS), protein I 54 129 6.4E-19 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VS_0140 5d42badf61b9760d5674113d88aea96b 131 TIGRFAM TIGR01707 gspI: type II secretion system protein I 20 117 4.5E-34 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VS_0140 5d42badf61b9760d5674113d88aea96b 131 Gene3D G3DSA:3.30.1300.30 44 131 3.6E-32 T 14-10-2018 VS_II1508 d51d6299f6517110dbe339c80409d25e 127 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 29 124 21.305 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VS_II1508 d51d6299f6517110dbe339c80409d25e 127 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 32 121 1.2E-30 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VS_II1508 d51d6299f6517110dbe339c80409d25e 127 SUPERFAMILY SSF55248 31 122 1.31E-32 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VS_II1508 d51d6299f6517110dbe339c80409d25e 127 Gene3D G3DSA:3.30.1360.20 30 126 3.8E-31 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VS_3032 6f5b6c51e37d19fb6166ef4099842b96 170 SUPERFAMILY SSF52799 16 164 3.26E-29 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VS_3032 6f5b6c51e37d19fb6166ef4099842b96 170 Gene3D G3DSA:3.90.190.10 9 169 1.2E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VS_3032 6f5b6c51e37d19fb6166ef4099842b96 170 Pfam PF00782 Dual specificity phosphatase, catalytic domain 39 153 4.7E-8 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 VS_3032 6f5b6c51e37d19fb6166ef4099842b96 170 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 116 126 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VS_1909 da62448155345a719f4e1e434aa43704 532 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VS_1909 da62448155345a719f4e1e434aa43704 532 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 520 1.2E-134 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_1909 da62448155345a719f4e1e434aa43704 532 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 5.8E-172 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_2769 efcb30fd95b04af9404d1da1b1cb1ded 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 1.3E-56 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VS_2769 efcb30fd95b04af9404d1da1b1cb1ded 207 Gene3D G3DSA:3.40.50.1950 1 204 2.6E-77 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VS_2769 efcb30fd95b04af9404d1da1b1cb1ded 207 SUPERFAMILY SSF52507 6 202 1.19E-56 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VS_2769 efcb30fd95b04af9404d1da1b1cb1ded 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.779 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VS_2769 efcb30fd95b04af9404d1da1b1cb1ded 207 Pfam PF02441 Flavoprotein 6 182 4.6E-25 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VS_II0613 b46f9594cde37cfce128576a08edb3d8 98 Gene3D G3DSA:2.60.200.60 53 97 1.4E-9 T 14-10-2018 VS_II0613 b46f9594cde37cfce128576a08edb3d8 98 Pfam PF05488 PAAR motif 23 88 4.5E-20 T 14-10-2018 IPR008727 PAAR motif VS_II1487 30c5881450c50c44df93588cac25406f 281 Pfam PF00072 Response regulator receiver domain 13 121 1.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II1487 30c5881450c50c44df93588cac25406f 281 SMART SM00850 182 281 2.3E-17 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VS_II1487 30c5881450c50c44df93588cac25406f 281 Pfam PF04397 LytTr DNA-binding domain 183 280 1.0E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VS_II1487 30c5881450c50c44df93588cac25406f 281 Gene3D G3DSA:2.40.50.40 175 246 2.7E-7 T 14-10-2018 VS_II1487 30c5881450c50c44df93588cac25406f 281 SUPERFAMILY SSF52172 10 129 3.13E-30 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1487 30c5881450c50c44df93588cac25406f 281 Gene3D G3DSA:3.40.50.2300 7 140 5.6E-32 T 14-10-2018 VS_II1487 30c5881450c50c44df93588cac25406f 281 SMART SM00448 10 122 2.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0546 b665e99c5735a9d79d8f3daee5d3777a 325 Gene3D G3DSA:3.20.20.300 1 325 6.4E-124 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VS_0546 b665e99c5735a9d79d8f3daee5d3777a 325 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 286 1.2E-85 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VS_0546 b665e99c5735a9d79d8f3daee5d3777a 325 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 325 44.903 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VS_0546 b665e99c5735a9d79d8f3daee5d3777a 325 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VS_0546 b665e99c5735a9d79d8f3daee5d3777a 325 SUPERFAMILY SSF51445 2 288 1.16E-85 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_II0594 15a9149c3426c86c1caa92bd2c33ae1e 402 SUPERFAMILY SSF109604 156 327 3.66E-30 T 14-10-2018 VS_II0594 15a9149c3426c86c1caa92bd2c33ae1e 402 SMART SM00471 161 297 1.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain VS_II0594 15a9149c3426c86c1caa92bd2c33ae1e 402 Gene3D G3DSA:1.10.3210.10 12 328 2.9E-68 T 14-10-2018 VS_II0594 15a9149c3426c86c1caa92bd2c33ae1e 402 Pfam PF01966 HD domain 166 287 7.3E-14 T 14-10-2018 IPR006674 HD domain VS_II0594 15a9149c3426c86c1caa92bd2c33ae1e 402 Pfam PF11871 Domain of unknown function (DUF3391) 12 128 7.7E-17 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 VS_2137 72e768f1910d6afe0b25d0f618880997 185 SUPERFAMILY SSF52218 13 185 1.29E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_2137 72e768f1910d6afe0b25d0f618880997 185 Pfam PF03358 NADPH-dependent FMN reductase 13 152 1.6E-29 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VS_2137 72e768f1910d6afe0b25d0f618880997 185 Gene3D G3DSA:3.40.50.360 10 185 1.4E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VS_0192 f188dde90d7d86d1c84e901a199ad2e6 240 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 2.1E-60 T 14-10-2018 VS_0192 f188dde90d7d86d1c84e901a199ad2e6 240 Gene3D G3DSA:1.10.510.10 135 239 6.4E-15 T 14-10-2018 VS_0192 f188dde90d7d86d1c84e901a199ad2e6 240 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 36.983 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VS_0192 f188dde90d7d86d1c84e901a199ad2e6 240 SUPERFAMILY SSF56112 46 194 1.19E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 Gene3D G3DSA:3.40.50.2300 61 305 5.1E-81 T 14-10-2018 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 SUPERFAMILY SSF47413 1 59 1.03E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.7E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 Gene3D G3DSA:1.10.260.40 1 59 3.1E-25 T 14-10-2018 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 SMART SM00354 1 71 2.2E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 Pfam PF13377 Periplasmic binding protein-like domain 168 329 7.5E-43 T 14-10-2018 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 Gene3D G3DSA:3.40.50.2300 160 289 5.1E-81 T 14-10-2018 VS_2899 fa1d31c7d38e3e98299265eeaf5ad8b0 334 SUPERFAMILY SSF53822 60 332 2.55E-89 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_0990 661f78fd43d57f1c2b0535bc5d5dee26 543 Gene3D G3DSA:3.90.76.10 72 195 1.6E-189 T 14-10-2018 VS_0990 661f78fd43d57f1c2b0535bc5d5dee26 543 Gene3D G3DSA:3.40.190.10 42 524 1.6E-189 T 14-10-2018 VS_0990 661f78fd43d57f1c2b0535bc5d5dee26 543 SUPERFAMILY SSF53850 37 535 2.17E-145 T 14-10-2018 VS_0990 661f78fd43d57f1c2b0535bc5d5dee26 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VS_0990 661f78fd43d57f1c2b0535bc5d5dee26 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 462 7.5E-94 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_0990 661f78fd43d57f1c2b0535bc5d5dee26 543 PIRSF PIRSF002741 1 543 1.3E-115 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_0990 661f78fd43d57f1c2b0535bc5d5dee26 543 Gene3D G3DSA:3.10.105.10 297 512 1.6E-189 T 14-10-2018 VS_1323 32c4b5a9a6d2e10b0f6b1ac414322009 242 SUPERFAMILY SSF53850 37 241 1.76E-18 T 14-10-2018 VS_1323 32c4b5a9a6d2e10b0f6b1ac414322009 242 Gene3D G3DSA:3.40.190.10 119 211 1.0E-8 T 14-10-2018 VS_1323 32c4b5a9a6d2e10b0f6b1ac414322009 242 Gene3D G3DSA:3.40.190.10 40 241 1.0E-8 T 14-10-2018 VS_1323 32c4b5a9a6d2e10b0f6b1ac414322009 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 241 2.0E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_0188 a4b7704279ae829cc51561629315a8f7 351 Gene3D G3DSA:3.40.50.2000 1 147 1.5E-53 T 14-10-2018 VS_0188 a4b7704279ae829cc51561629315a8f7 351 SUPERFAMILY SSF53756 1 343 2.2E-96 T 14-10-2018 VS_0188 a4b7704279ae829cc51561629315a8f7 351 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 6.1E-146 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VS_0188 a4b7704279ae829cc51561629315a8f7 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 325 6.4E-70 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VS_0188 a4b7704279ae829cc51561629315a8f7 351 Gene3D G3DSA:3.40.50.2000 165 345 1.3E-60 T 14-10-2018 VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 SUPERFAMILY SSF53850 91 289 1.18E-40 T 14-10-2018 VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 Pfam PF03466 LysR substrate binding domain 89 288 3.8E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 Gene3D G3DSA:3.40.190.290 91 290 2.8E-49 T 14-10-2018 VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 SUPERFAMILY SSF46785 3 111 2.52E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1682 de3d4ff88dd45f1d73378d4f02b980c7 290 Gene3D G3DSA:1.10.10.10 1 89 1.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1179 ba001579833837d86560801743092f84 395 Pfam PF00571 CBS domain 348 393 9.0E-6 T 14-10-2018 IPR000644 CBS domain VS_1179 ba001579833837d86560801743092f84 395 Gene3D G3DSA:3.10.580.10 302 391 6.3E-6 T 14-10-2018 VS_1179 ba001579833837d86560801743092f84 395 SUPERFAMILY SSF54631 274 392 7.21E-14 T 14-10-2018 VS_1179 ba001579833837d86560801743092f84 395 Gene3D G3DSA:3.40.50.300 33 301 1.9E-80 T 14-10-2018 VS_1179 ba001579833837d86560801743092f84 395 SMART SM00382 53 242 6.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1179 ba001579833837d86560801743092f84 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 393 2.8E-153 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VS_1179 ba001579833837d86560801743092f84 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1179 ba001579833837d86560801743092f84 395 SUPERFAMILY SSF52540 37 271 1.24E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1179 ba001579833837d86560801743092f84 395 Pfam PF00005 ABC transporter 45 192 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2271 3efd589cfa565affe565a0f0d959306b 175 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 18 175 8.0E-59 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VS_2271 3efd589cfa565affe565a0f0d959306b 175 Pfam PF17323 Trans-membrane regulatory protein ToxS 25 173 3.9E-70 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VS_0908 ae0f915fe2ce964355216830a71df59a 504 SUPERFAMILY SSF56235 2 256 4.98E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0908 ae0f915fe2ce964355216830a71df59a 504 SUPERFAMILY SSF53271 249 482 2.1E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VS_0908 ae0f915fe2ce964355216830a71df59a 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 3.1E-164 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VS_0908 ae0f915fe2ce964355216830a71df59a 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.556 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VS_0908 ae0f915fe2ce964355216830a71df59a 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 3.3E-17 T 14-10-2018 VS_0908 ae0f915fe2ce964355216830a71df59a 504 Gene3D G3DSA:3.60.20.10 2 411 2.4E-157 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0908 ae0f915fe2ce964355216830a71df59a 504 PIRSF PIRSF000485 1 480 4.0E-167 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VS_0908 ae0f915fe2ce964355216830a71df59a 504 Gene3D G3DSA:3.40.50.2020 276 439 2.4E-157 T 14-10-2018 VS_II1371 9279d822d722e9b8a13309a3c284139b 104 SUPERFAMILY SSF103473 14 101 5.62E-5 T 14-10-2018 IPR036259 MFS transporter superfamily VS_1611 8768eefb8bfa0bf1a8c8d114768c0080 351 SUPERFAMILY SSF51695 23 350 4.97E-88 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VS_1611 8768eefb8bfa0bf1a8c8d114768c0080 351 Gene3D G3DSA:3.20.20.190 21 350 2.9E-122 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VS_1611 8768eefb8bfa0bf1a8c8d114768c0080 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 1.4E-61 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VS_1305 3db65c3dde0f19a9b56664415899893e 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 227 4.3E-60 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VS_1305 3db65c3dde0f19a9b56664415899893e 238 SUPERFAMILY SSF100950 3 237 1.15E-61 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_1305 3db65c3dde0f19a9b56664415899893e 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 13 236 4.7E-54 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 VS_1305 3db65c3dde0f19a9b56664415899893e 238 Gene3D G3DSA:3.40.50.1360 1 238 2.2E-88 T 14-10-2018 VS_1820 a560ec71f856e38b7691e952e885b3f4 216 SUPERFAMILY SSF56925 36 179 1.26E-9 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_1820 a560ec71f856e38b7691e952e885b3f4 216 Gene3D G3DSA:2.40.160.20 36 170 2.5E-7 T 14-10-2018 VS_1820 a560ec71f856e38b7691e952e885b3f4 216 Pfam PF13505 Outer membrane protein beta-barrel domain 15 163 1.6E-7 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VS_2554 b38923cf67c4a8e236cb83f93f1eb0bf 65 Gene3D G3DSA:3.30.50.10 1 65 4.7E-23 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VS_2554 b38923cf67c4a8e236cb83f93f1eb0bf 65 SUPERFAMILY SSF57716 5 63 4.56E-20 T 14-10-2018 VS_2554 b38923cf67c4a8e236cb83f93f1eb0bf 65 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 4.3E-23 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VS_2554 b38923cf67c4a8e236cb83f93f1eb0bf 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 17.822 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VS_1856 032ea2e70027470c2104fa1fa3a281ec 132 Gene3D G3DSA:3.10.450.40 61 120 4.7E-7 T 14-10-2018 VS_2000 7f7b335d0ae6b8d6b10be96202e830d8 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.7E-36 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VS_2125 ba139468b8f08bf468d4c5a0521883b0 167 ProSitePatterns PS00934 Glyoxalase I signature 1. 9 30 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VS_2125 ba139468b8f08bf468d4c5a0521883b0 167 SUPERFAMILY SSF54593 4 159 9.8E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2125 ba139468b8f08bf468d4c5a0521883b0 167 Gene3D G3DSA:3.10.180.10 2 165 5.4E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2125 ba139468b8f08bf468d4c5a0521883b0 167 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 153 2.6E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 3.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 3.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 3.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.318 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 SUPERFAMILY SSF52374 6 316 5.22E-98 T 14-10-2018 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 Gene3D G3DSA:3.40.50.620 5 217 1.3E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 SUPERFAMILY SSF55174 297 394 7.06E-15 T 14-10-2018 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 2.4E-78 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 6.6E-126 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 Gene3D G3DSA:1.10.240.10 218 326 5.4E-34 T 14-10-2018 VS_2497 7471b6acbb540cc12c2a2689fe3bbec3 395 Gene3D G3DSA:3.10.290.10 327 394 5.7E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_2795 8f5e2b57c045da42788b6f3beb559a6f 145 Pfam PF04945 YHS domain 38 83 3.6E-11 T 14-10-2018 IPR007029 YHS domain VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Pfam PF00005 ABC transporter 623 860 9.7E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Gene3D G3DSA:1.20.1580.10 90 492 1.3E-244 T 14-10-2018 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Gene3D G3DSA:3.40.50.300 616 936 1.4E-139 T 14-10-2018 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Gene3D G3DSA:3.30.190.20 130 239 1.3E-244 T 14-10-2018 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 SUPERFAMILY SSF52540 3 569 6.48E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 SUPERFAMILY SSF52540 621 913 2.54E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Gene3D G3DSA:1.20.1580.10 692 830 1.4E-139 T 14-10-2018 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Gene3D G3DSA:1.10.8.280 287 403 1.3E-244 T 14-10-2018 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Gene3D G3DSA:3.40.50.300 6 594 1.3E-244 T 14-10-2018 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.819 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VS_0320 dbb8bd6f6a6036123117b0f5139049ff 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1463 a76e5c58b56a7f52cfb05d936f5c09eb 79 SMART SM00360 2 75 1.2E-23 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VS_II1463 a76e5c58b56a7f52cfb05d936f5c09eb 79 Gene3D G3DSA:3.30.70.330 1 79 5.9E-26 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VS_II1463 a76e5c58b56a7f52cfb05d936f5c09eb 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 4.4E-22 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VS_II1463 a76e5c58b56a7f52cfb05d936f5c09eb 79 SUPERFAMILY SSF54928 2 78 2.96E-25 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VS_1452 925db92a15812e1fd181db220efe9cd8 144 Pfam PF05155 Phage X family 45 131 1.8E-35 T 14-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 VS_1633 1a4a724768f68f21bc0319951c4dbb07 682 Gene3D G3DSA:2.40.170.20 184 682 1.2E-120 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_1633 1a4a724768f68f21bc0319951c4dbb07 682 Gene3D G3DSA:2.170.130.10 45 178 1.2E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_1633 1a4a724768f68f21bc0319951c4dbb07 682 Pfam PF00593 TonB dependent receptor 224 679 1.6E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_1633 1a4a724768f68f21bc0319951c4dbb07 682 SUPERFAMILY SSF56935 40 682 8.11E-126 T 14-10-2018 VS_1633 1a4a724768f68f21bc0319951c4dbb07 682 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 173 9.8E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_1283 4415b3f8e9e182a2f6393f25f6e019c9 331 PIRSF PIRSF034367 2 331 2.1E-193 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 VS_1283 4415b3f8e9e182a2f6393f25f6e019c9 331 Pfam PF08908 Domain of unknown function (DUF1852) 7 327 1.1E-181 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 VS_1806 b55da0a6460a0d544fa049bbed3ba8e4 136 PIRSF PIRSF006113 16 136 6.0E-53 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VS_1806 b55da0a6460a0d544fa049bbed3ba8e4 136 SUPERFAMILY SSF55620 15 135 8.34E-42 T 14-10-2018 VS_1806 b55da0a6460a0d544fa049bbed3ba8e4 136 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 20 112 1.2E-32 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VS_1806 b55da0a6460a0d544fa049bbed3ba8e4 136 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 21 136 3.7E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VS_1806 b55da0a6460a0d544fa049bbed3ba8e4 136 Gene3D G3DSA:3.30.479.10 16 136 1.0E-49 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VS_2766 4cfbbe46f407d7d25ec9047a77c595d2 537 SUPERFAMILY SSF161098 13 258 2.49E-41 T 14-10-2018 IPR035906 MetI-like superfamily VS_2766 4cfbbe46f407d7d25ec9047a77c595d2 537 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 258 4.2E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2766 4cfbbe46f407d7d25ec9047a77c595d2 537 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 525 1.5E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2766 4cfbbe46f407d7d25ec9047a77c595d2 537 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 9 518 4.8E-161 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VS_2766 4cfbbe46f407d7d25ec9047a77c595d2 537 SUPERFAMILY SSF161098 278 522 9.42E-28 T 14-10-2018 IPR035906 MetI-like superfamily VS_2766 4cfbbe46f407d7d25ec9047a77c595d2 537 Gene3D G3DSA:1.10.3720.10 6 262 7.3E-43 T 14-10-2018 IPR035906 MetI-like superfamily VS_2766 4cfbbe46f407d7d25ec9047a77c595d2 537 Gene3D G3DSA:1.10.3720.10 280 532 1.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily VS_1160 a957ad2310d262d2d9c721e7d5cef74f 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 7.6E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1160 a957ad2310d262d2d9c721e7d5cef74f 194 SUPERFAMILY SSF46689 5 70 4.24E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_1160 a957ad2310d262d2d9c721e7d5cef74f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1160 a957ad2310d262d2d9c721e7d5cef74f 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_1160 a957ad2310d262d2d9c721e7d5cef74f 194 Gene3D G3DSA:1.10.357.10 3 190 2.3E-26 T 14-10-2018 VS_II0894 3cf4120c92bb1dd99a3535248a203d83 474 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 202 257 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0894 3cf4120c92bb1dd99a3535248a203d83 474 Gene3D G3DSA:1.20.210.10 2 471 2.9E-178 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0894 3cf4120c92bb1dd99a3535248a203d83 474 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 460 3.8E-178 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VS_II0894 3cf4120c92bb1dd99a3535248a203d83 474 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 11 441 8.7E-97 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0894 3cf4120c92bb1dd99a3535248a203d83 474 SUPERFAMILY SSF81442 7 462 1.7E-105 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0079 f3d74d7a4d05404481a791d1922c10e6 301 Pfam PF02574 Homocysteine S-methyltransferase 8 294 1.4E-51 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VS_II0079 f3d74d7a4d05404481a791d1922c10e6 301 PIRSF PIRSF037505 1 299 2.2E-13 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 VS_II0079 f3d74d7a4d05404481a791d1922c10e6 301 Gene3D G3DSA:3.20.20.330 1 294 6.4E-60 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VS_II0079 f3d74d7a4d05404481a791d1922c10e6 301 SUPERFAMILY SSF82282 2 298 3.4E-74 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VS_II0283 6dfdd2cc9a4d9cafee330f8ee933a3bf 153 SUPERFAMILY SSF46689 1 74 8.21E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0283 6dfdd2cc9a4d9cafee330f8ee933a3bf 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 14-10-2018 VS_II0283 6dfdd2cc9a4d9cafee330f8ee933a3bf 153 Gene3D G3DSA:1.20.5.830 111 153 6.4E-24 T 14-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily VS_II0283 6dfdd2cc9a4d9cafee330f8ee933a3bf 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0283 6dfdd2cc9a4d9cafee330f8ee933a3bf 153 Gene3D G3DSA:1.10.287.790 61 110 3.3E-28 T 14-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 182 17.029 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 180 9.7E-43 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 142 161 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 SUPERFAMILY SSF47928 3 110 3.27E-19 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 PRINTS PR00125 ATP synthase delta subunit signature 79 90 1.1E-22 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 PRINTS PR00125 ATP synthase delta subunit signature 155 173 1.1E-22 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 PRINTS PR00125 ATP synthase delta subunit signature 90 104 1.1E-22 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-22 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 PRINTS PR00125 ATP synthase delta subunit signature 140 155 1.1E-22 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 180 3.4E-39 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II0911 69d557a85a9802ed5e995d7396120bb4 183 Gene3D G3DSA:1.10.520.20 2 111 3.5E-29 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_2910 95c73a1ace812df4a5eaeb3e3e73df52 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 5.7E-7 T 14-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VS_2910 95c73a1ace812df4a5eaeb3e3e73df52 115 Gene3D G3DSA:3.30.429.10 1 115 2.6E-31 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VS_2910 95c73a1ace812df4a5eaeb3e3e73df52 115 SUPERFAMILY SSF55331 2 115 5.19E-34 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VS_II1512 dbd5276cdc6cbb65645610b9b4e62f6e 940 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 7.5E-34 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 SUPERFAMILY SSF51905 2 313 5.18E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.5E-39 T 14-10-2018 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.5E-39 T 14-10-2018 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.5E-39 T 14-10-2018 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.5E-39 T 14-10-2018 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.5E-39 T 14-10-2018 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 Gene3D G3DSA:3.50.50.60 10 312 1.0E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 5.7E-124 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.2E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 300 7.1E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VS_1186 7efda08177a0c22691f1d121b2d6ba73 319 Gene3D G3DSA:3.50.50.60 118 244 1.0E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_2393 a6df610e6cca52560465e39c24e5a6fe 455 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 1.2E-50 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VS_2393 a6df610e6cca52560465e39c24e5a6fe 455 Gene3D G3DSA:3.30.1850.10 1 120 1.7E-57 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VS_2393 a6df610e6cca52560465e39c24e5a6fe 455 Pfam PF11892 Domain of unknown function (DUF3412) 330 451 1.3E-57 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VS_2393 a6df610e6cca52560465e39c24e5a6fe 455 SUPERFAMILY SSF102405 119 327 7.33E-41 T 14-10-2018 VS_2393 a6df610e6cca52560465e39c24e5a6fe 455 Gene3D G3DSA:3.40.50.450 121 450 2.9E-123 T 14-10-2018 VS_2393 a6df610e6cca52560465e39c24e5a6fe 455 Pfam PF03641 Possible lysine decarboxylase 187 326 1.3E-34 T 14-10-2018 IPR031100 LOG family VS_0593 e0da2ef9af9d50ed64738605406f218f 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 1.1E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_0593 e0da2ef9af9d50ed64738605406f218f 202 Pfam PF00578 AhpC/TSA family 4 139 2.0E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_0593 e0da2ef9af9d50ed64738605406f218f 202 PIRSF PIRSF000239 1 201 8.4E-59 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_0593 e0da2ef9af9d50ed64738605406f218f 202 SUPERFAMILY SSF52833 1 194 2.62E-65 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0593 e0da2ef9af9d50ed64738605406f218f 202 Gene3D G3DSA:3.40.30.10 1 197 1.0E-70 T 14-10-2018 VS_2132 e2abff850a194cffff955a2cc1f1b212 149 Gene3D G3DSA:1.10.490.10 15 147 1.1E-24 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VS_2132 e2abff850a194cffff955a2cc1f1b212 149 SUPERFAMILY SSF46458 21 146 9.55E-24 T 14-10-2018 IPR009050 Globin-like superfamily VS_II1265 f906f954ae60d5e236411293093f33d5 337 SUPERFAMILY SSF161098 97 295 4.97E-13 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1265 f906f954ae60d5e236411293093f33d5 337 Gene3D G3DSA:1.10.3720.10 93 305 3.5E-16 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1265 f906f954ae60d5e236411293093f33d5 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 8.4E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_2961 ca51fdd5a430feb5f6c5c3b93e2d47d4 165 Gene3D G3DSA:1.20.120.1370 1 158 2.2E-50 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily VS_2961 ca51fdd5a430feb5f6c5c3b93e2d47d4 165 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 155 2.7E-54 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VS_2961 ca51fdd5a430feb5f6c5c3b93e2d47d4 165 PIRSF PIRSF016548 3 165 2.5E-65 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VS_1908 9c6c6f9f6890dddfadcb29d88d731fda 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 1.2E-137 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_1908 9c6c6f9f6890dddfadcb29d88d731fda 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VS_1908 9c6c6f9f6890dddfadcb29d88d731fda 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 5.6E-174 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_0972 8c6cc50d1a44aba2bf58c1a88d38d1d0 230 PIRSF PIRSF006102 1 219 1.4E-77 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_0972 8c6cc50d1a44aba2bf58c1a88d38d1d0 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.934 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VS_0972 8c6cc50d1a44aba2bf58c1a88d38d1d0 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 1.9E-87 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VS_0972 8c6cc50d1a44aba2bf58c1a88d38d1d0 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 4.2E-64 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_II1509 b86462e51cd40f5f92f09d072175d947 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VS_II1509 b86462e51cd40f5f92f09d072175d947 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 2.6E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VS_II1509 b86462e51cd40f5f92f09d072175d947 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 2.6E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VS_II1509 b86462e51cd40f5f92f09d072175d947 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.6E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VS_II1509 b86462e51cd40f5f92f09d072175d947 264 SUPERFAMILY SSF56534 3 237 8.24E-94 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VS_II1509 b86462e51cd40f5f92f09d072175d947 264 Gene3D G3DSA:1.10.800.10 1 264 9.8E-93 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VS_II1509 b86462e51cd40f5f92f09d072175d947 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 242 6.4E-95 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 VS_II1509 b86462e51cd40f5f92f09d072175d947 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 14 229 7.8E-44 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VS_II1391 7f8fe1e13de71fc4d288e56ffd26d4c1 415 SUPERFAMILY SSF53850 34 411 5.09E-63 T 14-10-2018 VS_II1391 7f8fe1e13de71fc4d288e56ffd26d4c1 415 Gene3D G3DSA:3.40.190.10 50 340 2.1E-74 T 14-10-2018 VS_II1391 7f8fe1e13de71fc4d288e56ffd26d4c1 415 Pfam PF13416 Bacterial extracellular solute-binding protein 46 346 4.8E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_II1391 7f8fe1e13de71fc4d288e56ffd26d4c1 415 Gene3D G3DSA:3.40.190.10 138 401 2.1E-74 T 14-10-2018 VS_2111 66f4804ddde28d97a4b88ed19d647c42 418 Pfam PF07690 Major Facilitator Superfamily 32 275 4.8E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_2111 66f4804ddde28d97a4b88ed19d647c42 418 Gene3D G3DSA:1.20.1250.20 19 408 6.0E-31 T 14-10-2018 VS_2111 66f4804ddde28d97a4b88ed19d647c42 418 SUPERFAMILY SSF103473 22 410 1.05E-35 T 14-10-2018 IPR036259 MFS transporter superfamily VS_1354 e3b9c060433e905e856ccc3ddbfaf1a0 197 PIRSF PIRSF006293 1 197 2.5E-73 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_1354 e3b9c060433e905e856ccc3ddbfaf1a0 197 SUPERFAMILY SSF52402 1 194 8.6E-59 T 14-10-2018 VS_1354 e3b9c060433e905e856ccc3ddbfaf1a0 197 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 196 44.911 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_1354 e3b9c060433e905e856ccc3ddbfaf1a0 197 Pfam PF06508 Queuosine biosynthesis protein QueC 3 195 4.5E-76 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_1354 e3b9c060433e905e856ccc3ddbfaf1a0 197 Gene3D G3DSA:3.40.50.620 1 197 3.2E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_1354 e3b9c060433e905e856ccc3ddbfaf1a0 197 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 194 6.4E-78 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VS_0781 6579b127952144d1d980aabb66dcaad6 120 Gene3D G3DSA:3.10.129.10 3 120 1.8E-34 T 14-10-2018 VS_0781 6579b127952144d1d980aabb66dcaad6 120 PIRSF PIRSF030962 1 120 4.0E-43 T 14-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_0781 6579b127952144d1d980aabb66dcaad6 120 SUPERFAMILY SSF54637 16 114 7.29E-16 T 14-10-2018 IPR029069 HotDog domain superfamily VS_II0972 20869314a0f1d92a89f442604f77cca8 436 Pfam PF13665 Domain of unknown function (DUF4150) 4 68 1.5E-16 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_0505 6508fa1ee3fcf3c7eeee1d6c37d0626b 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.81 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VS_0505 6508fa1ee3fcf3c7eeee1d6c37d0626b 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.3E-94 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VS_1435 b1e488f853297baa862cb4a3bdaeb41a 199 Gene3D G3DSA:2.40.160.20 31 199 7.8E-14 T 14-10-2018 VS_1435 b1e488f853297baa862cb4a3bdaeb41a 199 SUPERFAMILY SSF56925 32 199 4.71E-17 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_1435 b1e488f853297baa862cb4a3bdaeb41a 199 Pfam PF13505 Outer membrane protein beta-barrel domain 7 199 1.3E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VS_0039 f443010e153f987879a274e7ee9aa968 326 SUPERFAMILY SSF51735 116 289 8.92E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0039 f443010e153f987879a274e7ee9aa968 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 3.6E-135 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI VS_0039 f443010e153f987879a274e7ee9aa968 326 Gene3D G3DSA:3.90.180.10 17 325 1.7E-120 T 14-10-2018 VS_0039 f443010e153f987879a274e7ee9aa968 326 Gene3D G3DSA:3.40.50.720 126 294 1.7E-120 T 14-10-2018 VS_0039 f443010e153f987879a274e7ee9aa968 326 Pfam PF00107 Zinc-binding dehydrogenase 159 280 7.3E-13 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VS_0039 f443010e153f987879a274e7ee9aa968 326 SUPERFAMILY SSF50129 2 145 1.79E-42 T 14-10-2018 IPR011032 GroES-like superfamily VS_0039 f443010e153f987879a274e7ee9aa968 326 SMART SM00829 13 324 5.7E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VS_1655 86b4e11722bdd46690d2c4b1aca86504 156 SUPERFAMILY SSF102712 58 130 6.93E-6 T 14-10-2018 VS_1655 86b4e11722bdd46690d2c4b1aca86504 156 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 106 111 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VS_1655 86b4e11722bdd46690d2c4b1aca86504 156 TIGRFAM TIGR00608 radc: DNA repair protein RadC 22 156 1.8E-43 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 VS_1655 86b4e11722bdd46690d2c4b1aca86504 156 Pfam PF04002 RadC-like JAB domain 36 154 6.9E-44 T 14-10-2018 IPR025657 RadC-like JAB domain VS_1655 86b4e11722bdd46690d2c4b1aca86504 156 Gene3D G3DSA:3.40.140.10 35 156 4.3E-42 T 14-10-2018 VS_2135 8cecc9dc56975e55532a68247d61a037 319 SUPERFAMILY SSF53850 89 296 2.35E-35 T 14-10-2018 VS_2135 8cecc9dc56975e55532a68247d61a037 319 Gene3D G3DSA:3.40.190.10 93 290 3.1E-49 T 14-10-2018 VS_2135 8cecc9dc56975e55532a68247d61a037 319 SUPERFAMILY SSF46785 6 87 3.74E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2135 8cecc9dc56975e55532a68247d61a037 319 Gene3D G3DSA:3.40.190.10 163 266 3.1E-49 T 14-10-2018 VS_2135 8cecc9dc56975e55532a68247d61a037 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2135 8cecc9dc56975e55532a68247d61a037 319 Gene3D G3DSA:1.10.10.10 4 92 6.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2135 8cecc9dc56975e55532a68247d61a037 319 Pfam PF03466 LysR substrate binding domain 88 292 2.4E-34 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0957 96300cf5268e73aa4a0be229e9621797 212 Pfam PF01914 MarC family integral membrane protein 8 208 2.7E-66 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VS_0957 96300cf5268e73aa4a0be229e9621797 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 1.4E-67 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 SMART SM00382 366 554 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 Pfam PF00005 ABC transporter 357 505 1.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 Pfam PF00664 ABC transporter transmembrane region 19 291 7.9E-29 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 Gene3D G3DSA:1.20.1560.10 5 318 2.1E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 Gene3D G3DSA:3.40.50.300 332 586 6.7E-71 T 14-10-2018 VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 SUPERFAMILY SSF90123 7 321 1.57E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0421 9103d77c069dc8130b87529a44fdd0a1 587 SUPERFAMILY SSF52540 339 578 8.41E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0165 8786cf743632f10ab27ecd185dd319af 527 Pfam PF02378 Phosphotransferase system, EIIC 10 357 1.3E-55 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_0165 8786cf743632f10ab27ecd185dd319af 527 SUPERFAMILY SSF55604 450 523 5.75E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_0165 8786cf743632f10ab27ecd185dd319af 527 Gene3D G3DSA:3.30.1360.60 445 524 2.3E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VS_0165 8786cf743632f10ab27ecd185dd319af 527 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 414 509 2.0E-18 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VS_0165 8786cf743632f10ab27ecd185dd319af 527 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 461 478 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_0165 8786cf743632f10ab27ecd185dd319af 527 Pfam PF00367 phosphotransferase system, EIIB 451 481 3.6E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VS_3053 09478057ffd2f89eaf1c2c3d79bcc014 242 SUPERFAMILY SSF69618 1 241 2.35E-46 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3053 09478057ffd2f89eaf1c2c3d79bcc014 242 Gene3D G3DSA:3.40.50.10090 32 161 4.0E-66 T 14-10-2018 VS_3053 09478057ffd2f89eaf1c2c3d79bcc014 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 233 2.0E-30 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VS_3053 09478057ffd2f89eaf1c2c3d79bcc014 242 Gene3D G3DSA:3.40.50.10090 4 240 4.0E-66 T 14-10-2018 VS_0766 cd68659a1a2d20289c7ead44fb9ecb0e 237 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 99 187 9.1E-5 T 14-10-2018 IPR009331 Oligogalacturonate-specific porin VS_0766 cd68659a1a2d20289c7ead44fb9ecb0e 237 Gene3D G3DSA:2.40.160.40 39 237 2.9E-11 T 14-10-2018 VS_2785 cf722a478f49e6ceb9518d36348cdd81 302 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 38 290 3.0E-105 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VS_2785 cf722a478f49e6ceb9518d36348cdd81 302 Pfam PF10987 Protein of unknown function (DUF2806) 62 280 7.8E-84 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VS_1164 2e369ea830b2d07c017cbaffa7fda249 400 Pfam PF13416 Bacterial extracellular solute-binding protein 75 373 7.5E-24 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_1164 2e369ea830b2d07c017cbaffa7fda249 400 Gene3D G3DSA:3.40.190.10 178 350 1.5E-8 T 14-10-2018 VS_1164 2e369ea830b2d07c017cbaffa7fda249 400 PIRSF PIRSF029172 12 400 1.2E-172 T 14-10-2018 IPR027020 Protein ynjB VS_1164 2e369ea830b2d07c017cbaffa7fda249 400 Gene3D G3DSA:3.40.190.10 55 177 5.2E-6 T 14-10-2018 VS_1164 2e369ea830b2d07c017cbaffa7fda249 400 SUPERFAMILY SSF53850 52 398 2.08E-40 T 14-10-2018 VS_0432 80c533f0950dc19115fa271366a5d999 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 2.5E-40 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VS_0432 80c533f0950dc19115fa271366a5d999 421 SUPERFAMILY SSF81342 6 296 5.81E-93 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VS_0432 80c533f0950dc19115fa271366a5d999 421 PIRSF PIRSF038885 1 421 1.8E-152 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VS_0432 80c533f0950dc19115fa271366a5d999 421 Gene3D G3DSA:1.20.810.10 1 421 2.0E-149 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VS_0432 80c533f0950dc19115fa271366a5d999 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 3.2E-66 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VS_0432 80c533f0950dc19115fa271366a5d999 421 SUPERFAMILY SSF81648 297 412 7.41E-33 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VS_II1100 488a1398bc95b072b883de93b45dc346 79 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 1 70 3.7E-10 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VS_II1100 488a1398bc95b072b883de93b45dc346 79 Gene3D G3DSA:3.20.20.70 1 77 6.6E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II1100 488a1398bc95b072b883de93b45dc346 79 SUPERFAMILY SSF51412 1 68 2.88E-15 T 14-10-2018 VS_1181 12a60049e194c835d8d09b291511a246 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 317 1.3E-51 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VS_1181 12a60049e194c835d8d09b291511a246 335 Gene3D G3DSA:3.40.190.10 29 330 2.9E-137 T 14-10-2018 VS_1181 12a60049e194c835d8d09b291511a246 335 Gene3D G3DSA:3.40.190.100 117 258 2.9E-137 T 14-10-2018 VS_1181 12a60049e194c835d8d09b291511a246 335 SUPERFAMILY SSF53850 27 332 9.23E-90 T 14-10-2018 VS_II0440 86a34408d8f706c22a51d933e88dfa32 641 SUPERFAMILY SSF51735 419 560 1.54E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0440 86a34408d8f706c22a51d933e88dfa32 641 Gene3D G3DSA:3.40.50.720 419 580 4.1E-35 T 14-10-2018 VS_II0440 86a34408d8f706c22a51d933e88dfa32 641 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 3.7E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VS_II0440 86a34408d8f706c22a51d933e88dfa32 641 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 2.1E-73 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VS_II0440 86a34408d8f706c22a51d933e88dfa32 641 Pfam PF02254 TrkA-N domain 422 536 2.5E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VS_II0440 86a34408d8f706c22a51d933e88dfa32 641 Gene3D G3DSA:1.20.1530.20 2 400 1.3E-76 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VS_1260 133f11a40f14d6ac1b6e4f8ac29578ee 376 Gene3D G3DSA:3.40.50.300 8 237 4.4E-16 T 14-10-2018 VS_1260 133f11a40f14d6ac1b6e4f8ac29578ee 376 Pfam PF01926 50S ribosome-binding GTPase 39 142 7.4E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_1260 133f11a40f14d6ac1b6e4f8ac29578ee 376 Pfam PF05128 Domain of unknown function (DUF697) 226 366 1.8E-6 T 14-10-2018 IPR021147 Protein of unknown function DUF697 VS_1260 133f11a40f14d6ac1b6e4f8ac29578ee 376 SUPERFAMILY SSF52540 26 211 1.71E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1228 b67aead905334d2e46b05931b81b8f05 127 Pfam PF01042 Endoribonuclease L-PSP 7 125 4.5E-43 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_II1228 b67aead905334d2e46b05931b81b8f05 127 SUPERFAMILY SSF55298 2 126 1.43E-46 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II1228 b67aead905334d2e46b05931b81b8f05 127 Gene3D G3DSA:3.30.1330.40 1 127 3.1E-52 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II1228 b67aead905334d2e46b05931b81b8f05 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 2.0E-50 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VS_1347 4522c25ea7898233c1738cc059ccee04 634 Pfam PF13193 AMP-binding enzyme C-terminal domain 519 598 1.0E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VS_1347 4522c25ea7898233c1738cc059ccee04 634 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 16 65 1.5E-13 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VS_1347 4522c25ea7898233c1738cc059ccee04 634 SUPERFAMILY SSF56801 12 632 3.79E-156 T 14-10-2018 VS_1347 4522c25ea7898233c1738cc059ccee04 634 Gene3D G3DSA:3.40.50.12780 44 503 5.4E-104 T 14-10-2018 VS_1347 4522c25ea7898233c1738cc059ccee04 634 Pfam PF00501 AMP-binding enzyme 75 510 9.4E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VS_1347 4522c25ea7898233c1738cc059ccee04 634 ProSitePatterns PS00455 Putative AMP-binding domain signature. 246 257 - T 14-10-2018 IPR020845 AMP-binding, conserved site VS_1347 4522c25ea7898233c1738cc059ccee04 634 Gene3D G3DSA:3.30.300.30 506 633 5.2E-24 T 14-10-2018 VS_II1035 ffdfde131e573b7ad81851a94259a41d 310 Pfam PF12833 Helix-turn-helix domain 55 134 2.7E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1035 ffdfde131e573b7ad81851a94259a41d 310 SUPERFAMILY SSF46689 33 82 1.97E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1035 ffdfde131e573b7ad81851a94259a41d 310 SUPERFAMILY SSF46689 85 134 8.06E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1035 ffdfde131e573b7ad81851a94259a41d 310 SMART SM00342 49 133 2.7E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1035 ffdfde131e573b7ad81851a94259a41d 310 Gene3D G3DSA:1.10.10.60 29 137 7.0E-20 T 14-10-2018 VS_0706 ab00b8e27730214a0fbbbd1a193d2d2c 453 SUPERFAMILY SSF161070 9 452 1.31E-117 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VS_0706 ab00b8e27730214a0fbbbd1a193d2d2c 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 1.2E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_0706 ab00b8e27730214a0fbbbd1a193d2d2c 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 1.2E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_0706 ab00b8e27730214a0fbbbd1a193d2d2c 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 1.2E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_0706 ab00b8e27730214a0fbbbd1a193d2d2c 453 Pfam PF00209 Sodium:neurotransmitter symporter family 9 127 1.1E-20 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_0706 ab00b8e27730214a0fbbbd1a193d2d2c 453 Pfam PF00209 Sodium:neurotransmitter symporter family 153 451 3.0E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 SUPERFAMILY SSF46689 60 107 1.34E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 Gene3D G3DSA:3.20.80.10 126 280 2.4E-46 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 SUPERFAMILY SSF46689 5 55 7.62E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 Gene3D G3DSA:1.10.10.60 59 114 2.3E-11 T 14-10-2018 VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 SUPERFAMILY SSF55136 126 280 1.92E-37 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 Gene3D G3DSA:1.10.10.60 1 57 4.6E-11 T 14-10-2018 VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 Pfam PF12833 Helix-turn-helix domain 31 105 1.4E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 Pfam PF06445 GyrI-like small molecule binding domain 126 280 1.7E-37 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 SMART SM00342 22 105 3.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1290 6f3fc771c939db3359408abd5b5c4236 280 SMART SM00871 126 280 5.3E-38 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VS_1431 896b6c0a15a98c89a3376b2e750c889e 151 Gene3D G3DSA:1.10.1220.10 98 150 1.4E-20 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VS_1431 896b6c0a15a98c89a3376b2e750c889e 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 4.0E-60 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VS_1431 896b6c0a15a98c89a3376b2e750c889e 151 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.9E-27 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VS_1431 896b6c0a15a98c89a3376b2e750c889e 151 Gene3D G3DSA:1.20.1270.380 1 89 1.9E-44 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily VS_1431 896b6c0a15a98c89a3376b2e750c889e 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.646 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VS_1431 896b6c0a15a98c89a3376b2e750c889e 151 Pfam PF06303 MatP N-terminal domain 2 85 2.3E-44 T 14-10-2018 IPR035087 MatP, N-terminal VS_II0036 bf2a63ff1bc3a46a059ca9804eff06d1 477 Gene3D G3DSA:3.20.20.140 56 415 8.3E-169 T 14-10-2018 VS_II0036 bf2a63ff1bc3a46a059ca9804eff06d1 477 Pfam PF07969 Amidohydrolase family 50 460 3.8E-38 T 14-10-2018 IPR013108 Amidohydrolase 3 VS_II0036 bf2a63ff1bc3a46a059ca9804eff06d1 477 Gene3D G3DSA:3.30.1490.130 284 340 8.3E-169 T 14-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 VS_II0036 bf2a63ff1bc3a46a059ca9804eff06d1 477 SUPERFAMILY SSF51338 3 469 2.97E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_II0036 bf2a63ff1bc3a46a059ca9804eff06d1 477 Gene3D G3DSA:2.30.40.10 3 429 8.3E-169 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_II0036 bf2a63ff1bc3a46a059ca9804eff06d1 477 SUPERFAMILY SSF51556 57 415 1.38E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_2096 7028dbf98d9a48281d0f5bea4e34d7ed 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 121 9.5E-25 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_2096 7028dbf98d9a48281d0f5bea4e34d7ed 125 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VS_2096 7028dbf98d9a48281d0f5bea4e34d7ed 125 Gene3D G3DSA:3.10.180.10 1 124 4.8E-46 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2096 7028dbf98d9a48281d0f5bea4e34d7ed 125 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 123 3.8E-57 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VS_2096 7028dbf98d9a48281d0f5bea4e34d7ed 125 SUPERFAMILY SSF54593 1 124 9.26E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_1673 29ab280744576ccee89eff8ec42c3b03 652 Gene3D G3DSA:3.30.70.270 477 652 2.6E-45 T 14-10-2018 VS_1673 29ab280744576ccee89eff8ec42c3b03 652 Gene3D G3DSA:1.25.40.10 132 355 6.9E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1673 29ab280744576ccee89eff8ec42c3b03 652 SMART SM00028 256 289 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1673 29ab280744576ccee89eff8ec42c3b03 652 SMART SM00028 214 247 9.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1673 29ab280744576ccee89eff8ec42c3b03 652 SMART SM00028 174 207 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1673 29ab280744576ccee89eff8ec42c3b03 652 SMART SM00028 134 167 32.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_1673 29ab280744576ccee89eff8ec42c3b03 652 SUPERFAMILY SSF48452 111 301 6.32E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1673 29ab280744576ccee89eff8ec42c3b03 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 494 648 5.9E-40 T 14-10-2018 IPR000160 GGDEF domain VS_1673 29ab280744576ccee89eff8ec42c3b03 652 SUPERFAMILY SSF55073 495 651 4.87E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VS_1673 29ab280744576ccee89eff8ec42c3b03 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 488 651 1.0E-40 T 14-10-2018 IPR000160 GGDEF domain VS_1673 29ab280744576ccee89eff8ec42c3b03 652 SMART SM00267 479 652 2.8E-45 T 14-10-2018 IPR000160 GGDEF domain VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 2.5E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 2.5E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 2.5E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 2.5E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 Pfam PF00155 Aminotransferase class I and II 27 391 1.7E-82 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 Gene3D G3DSA:3.90.1150.10 11 389 1.9E-158 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 Gene3D G3DSA:3.40.640.10 45 315 1.9E-158 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1819 087d698432a9ab02046a49a0f5df8fdd 396 SUPERFAMILY SSF53383 1 395 2.04E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 Gene3D G3DSA:3.40.50.300 145 290 8.2E-14 T 14-10-2018 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 Pfam PF14532 Sigma-54 interaction domain 147 250 3.3E-6 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 Gene3D G3DSA:1.10.8.60 291 353 8.3E-10 T 14-10-2018 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 Pfam PF00072 Response regulator receiver domain 9 117 2.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 SUPERFAMILY SSF52172 7 191 1.28E-36 T 14-10-2018 IPR011006 CheY-like superfamily VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 Gene3D G3DSA:1.10.10.60 373 432 7.3E-10 T 14-10-2018 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 SMART SM00448 5 116 1.7E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 Pfam PF02954 Bacterial regulatory protein, Fis family 389 427 2.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 SUPERFAMILY SSF52540 146 347 1.36E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 SUPERFAMILY SSF46689 377 430 3.58E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0009 493f2cd26778d1314e02e102b39be1a6 437 Gene3D G3DSA:3.40.50.2300 2 129 8.2E-34 T 14-10-2018 VS_II0669 cf2628bb2a9acd6d7012cef43b8d6df4 107 SUPERFAMILY SSF50022 1 106 7.59E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_II0669 cf2628bb2a9acd6d7012cef43b8d6df4 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 8.3E-34 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VS_II0669 cf2628bb2a9acd6d7012cef43b8d6df4 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 1.8E-39 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VS_II0669 cf2628bb2a9acd6d7012cef43b8d6df4 107 Gene3D G3DSA:2.102.10.10 1 107 1.5E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_1196 58733ddfbaddb7c60d3f99b353296fc1 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 1.1E-95 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 VS_II0327 b1cff3ed27b4c1ea52906e814d6499dc 425 SUPERFAMILY SSF51338 1 76 5.76E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_II0327 b1cff3ed27b4c1ea52906e814d6499dc 425 SUPERFAMILY SSF51556 54 372 1.15E-103 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_II0327 b1cff3ed27b4c1ea52906e814d6499dc 425 Gene3D G3DSA:3.20.20.140 55 362 1.5E-175 T 14-10-2018 VS_II0327 b1cff3ed27b4c1ea52906e814d6499dc 425 Gene3D G3DSA:2.30.40.10 8 409 1.5E-175 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VS_II0327 b1cff3ed27b4c1ea52906e814d6499dc 425 Pfam PF07969 Amidohydrolase family 43 403 5.9E-52 T 14-10-2018 IPR013108 Amidohydrolase 3 VS_2667 ae63973e944b88636c32dcd9ed370921 279 SUPERFAMILY SSF53790 1 249 3.53E-56 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VS_2667 ae63973e944b88636c32dcd9ed370921 279 Gene3D G3DSA:3.40.1010.10 1 115 5.2E-31 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VS_2667 ae63973e944b88636c32dcd9ed370921 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 213 4.9E-40 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VS_2667 ae63973e944b88636c32dcd9ed370921 279 Gene3D G3DSA:3.30.950.10 116 246 1.1E-53 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VS_2667 ae63973e944b88636c32dcd9ed370921 279 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 245 7.2E-94 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 Gene3D G3DSA:3.40.190.10 92 277 9.2E-36 T 14-10-2018 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 SUPERFAMILY SSF46785 3 111 1.58E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 Gene3D G3DSA:1.10.10.10 3 89 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 SUPERFAMILY SSF53850 90 286 1.33E-37 T 14-10-2018 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 Gene3D G3DSA:3.40.190.10 165 268 9.2E-36 T 14-10-2018 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0786 17c1cb518af6da67caf3ffad7a99ed3e 301 Pfam PF03466 LysR substrate binding domain 90 285 9.7E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VS_3097 af94e458b42c76844b0414f03ed758be 430 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 218 404 4.1E-44 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_3097 af94e458b42c76844b0414f03ed758be 430 SUPERFAMILY SSF51391 208 409 1.01E-57 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_3097 af94e458b42c76844b0414f03ed758be 430 Gene3D G3DSA:3.20.20.70 199 412 4.7E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_3097 af94e458b42c76844b0414f03ed758be 430 Pfam PF02581 Thiamine monophosphate synthase 216 394 3.3E-50 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 Gene3D G3DSA:3.40.190.10 45 355 9.6E-125 T 14-10-2018 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 PRINTS PR00181 Maltose binding protein signature 148 167 2.2E-58 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 PRINTS PR00181 Maltose binding protein signature 355 374 2.2E-58 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 PRINTS PR00181 Maltose binding protein signature 67 85 2.2E-58 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 PRINTS PR00181 Maltose binding protein signature 231 250 2.2E-58 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 PRINTS PR00181 Maltose binding protein signature 33 51 2.2E-58 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 PRINTS PR00181 Maltose binding protein signature 297 318 2.2E-58 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 PRINTS PR00181 Maltose binding protein signature 127 146 2.2E-58 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 SUPERFAMILY SSF53850 25 393 1.52E-83 T 14-10-2018 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 Pfam PF13416 Bacterial extracellular solute-binding protein 47 324 1.6E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 Gene3D G3DSA:3.40.190.10 135 386 9.6E-125 T 14-10-2018 VS_II0220 8a3a487fe4f67d4c65ec08227b1ef31e 394 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VS_0342 7356641c894a0288e6c1d315fdd769d4 295 PIRSF PIRSF038471 2 283 6.8E-79 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VS_0342 7356641c894a0288e6c1d315fdd769d4 295 Gene3D G3DSA:2.40.10.340 122 266 2.0E-35 T 14-10-2018 VS_0342 7356641c894a0288e6c1d315fdd769d4 295 Gene3D G3DSA:2.40.10.350 180 257 2.0E-35 T 14-10-2018 VS_0342 7356641c894a0288e6c1d315fdd769d4 295 Pfam PF04085 rod shape-determining protein MreC 123 269 7.6E-39 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VS_0342 7356641c894a0288e6c1d315fdd769d4 295 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 280 6.7E-87 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VS_II0404 54b64779477b8c9dd8e19e35912bdb49 300 Pfam PF00892 EamA-like transporter family 152 299 2.7E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0404 54b64779477b8c9dd8e19e35912bdb49 300 SUPERFAMILY SSF103481 40 139 3.79E-8 T 14-10-2018 VS_II0404 54b64779477b8c9dd8e19e35912bdb49 300 SUPERFAMILY SSF103481 205 298 1.02E-7 T 14-10-2018 VS_II0404 54b64779477b8c9dd8e19e35912bdb49 300 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 5 297 9.9E-95 T 14-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.2E-23 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.2E-86 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 SUPERFAMILY SSF88697 250 310 9.44E-13 T 14-10-2018 IPR015947 PUA-like superfamily VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.188 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 Gene3D G3DSA:2.30.130.10 249 312 1.0E-23 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 Gene3D G3DSA:3.30.2350.10 1 248 6.9E-96 T 14-10-2018 VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 SUPERFAMILY SSF55120 9 247 3.45E-84 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.4E-58 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VS_2480 2a6aeb4b5a30d462ea2ec98e1ca935d1 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 7.8E-18 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 Pfam PF12838 4Fe-4S dicluster domain 451 497 3.9E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.4E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 SUPERFAMILY SSF54862 141 504 2.48E-39 T 14-10-2018 VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 Gene3D G3DSA:3.30.70.20 413 480 3.0E-11 T 14-10-2018 VS_1488 f2b3e79ec6e7f28031806cfa6b5fd946 553 Gene3D G3DSA:3.30.70.20 180 254 3.9E-12 T 14-10-2018 VS_0645 6a8db23f61535eb74c329381067f944e 161 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 49 154 32.5 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE VS_0645 6a8db23f61535eb74c329381067f944e 161 Pfam PF04355 SmpA / OmlA family 77 144 8.5E-26 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VS_0645 6a8db23f61535eb74c329381067f944e 161 Gene3D G3DSA:3.30.1450.10 76 159 1.1E-24 T 14-10-2018 IPR037873 BamE-like VS_0209 f1cea579033b0c180c45c31b57a27865 234 Gene3D G3DSA:2.40.360.10 16 234 3.9E-61 T 14-10-2018 IPR023373 YmcC-like superfamily VS_0209 f1cea579033b0c180c45c31b57a27865 234 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 228 3.4E-65 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VS_0209 f1cea579033b0c180c45c31b57a27865 234 SUPERFAMILY SSF159270 18 231 1.12E-57 T 14-10-2018 IPR023373 YmcC-like superfamily VS_1683 7ae1b9e1cd3867bd3cc337a07f999b77 399 Pfam PF07690 Major Facilitator Superfamily 16 352 6.5E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_1683 7ae1b9e1cd3867bd3cc337a07f999b77 399 Gene3D G3DSA:1.20.1250.20 4 390 9.1E-50 T 14-10-2018 VS_1683 7ae1b9e1cd3867bd3cc337a07f999b77 399 SUPERFAMILY SSF103473 6 386 5.36E-55 T 14-10-2018 IPR036259 MFS transporter superfamily VS_2139 d5ac4c3e4c9b567216c0259613b69ce9 206 Gene3D G3DSA:3.15.10.40 39 206 5.3E-45 T 14-10-2018 VS_2139 d5ac4c3e4c9b567216c0259613b69ce9 206 Pfam PF07273 Protein of unknown function (DUF1439) 47 198 8.1E-40 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 Pfam PF00005 ABC transporter 22 164 8.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 SMART SM00382 31 214 4.8E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 Gene3D G3DSA:3.40.50.300 6 224 1.5E-69 T 14-10-2018 VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 SUPERFAMILY SSF50331 239 359 8.5E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 SUPERFAMILY SSF52540 7 245 3.33E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 Gene3D G3DSA:2.40.50.140 285 328 5.7E-13 T 14-10-2018 VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 Gene3D G3DSA:2.40.50.940 225 284 5.7E-13 T 14-10-2018 VS_II0401 93e31f2e2c093c9962ce87872bba0f6d 369 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 4 356 6.5E-157 T 14-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 VS_0881 bc72e006354e62f9f13062918bd2bd1e 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.123 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VS_0881 bc72e006354e62f9f13062918bd2bd1e 87 Gene3D G3DSA:3.30.1070.10 20 81 8.0E-24 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VS_0881 bc72e006354e62f9f13062918bd2bd1e 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 3.5E-32 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VS_0881 bc72e006354e62f9f13062918bd2bd1e 87 SUPERFAMILY SSF55229 34 86 8.63E-16 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VS_0881 bc72e006354e62f9f13062918bd2bd1e 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 2.0E-21 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VS_1423 5ba917364cb4ac00c510303bfd81933f 183 PIRSF PIRSF010252 1 179 9.9E-68 T 14-10-2018 IPR009809 Cell division protein ZapC VS_1423 5ba917364cb4ac00c510303bfd81933f 183 Pfam PF07126 Cell-division protein ZapC 1 169 4.1E-65 T 14-10-2018 IPR009809 Cell division protein ZapC VS_1423 5ba917364cb4ac00c510303bfd81933f 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 178 35.872 T 14-10-2018 IPR009809 Cell division protein ZapC VS_2656 8c52af64170bfcef168fea7886a569cc 252 Pfam PF00005 ABC transporter 17 157 5.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2656 8c52af64170bfcef168fea7886a569cc 252 Gene3D G3DSA:3.40.50.300 6 240 4.3E-60 T 14-10-2018 VS_2656 8c52af64170bfcef168fea7886a569cc 252 SUPERFAMILY SSF52540 6 218 1.48E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2656 8c52af64170bfcef168fea7886a569cc 252 SMART SM00382 26 201 8.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2190 094ab5738d5ee289d9a6e307cabc97d0 266 Gene3D G3DSA:3.40.50.1820 5 263 2.1E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2190 094ab5738d5ee289d9a6e307cabc97d0 266 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 3 263 32.381 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VS_2190 094ab5738d5ee289d9a6e307cabc97d0 266 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 16 262 4.9E-75 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VS_2190 094ab5738d5ee289d9a6e307cabc97d0 266 Pfam PF12697 Alpha/beta hydrolase family 19 254 3.2E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2190 094ab5738d5ee289d9a6e307cabc97d0 266 SUPERFAMILY SSF53474 12 263 4.69E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2302 1c828576d25162cf672fed3b8e3c7520 224 Gene3D G3DSA:3.30.1380.10 4 187 3.4E-35 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_2302 1c828576d25162cf672fed3b8e3c7520 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 176 9.5E-36 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VS_2302 1c828576d25162cf672fed3b8e3c7520 224 SUPERFAMILY SSF55166 21 176 4.45E-19 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_2445 5c38f49f601ef42fae2707201125b387 449 SUPERFAMILY SSF52540 152 393 6.15E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2445 5c38f49f601ef42fae2707201125b387 449 Gene3D G3DSA:3.40.50.300 146 383 1.6E-11 T 14-10-2018 VS_1696 a4ba9a5cdcd57e40ed6bc8c38d15e7df 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 29.417 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VS_1696 a4ba9a5cdcd57e40ed6bc8c38d15e7df 331 Gene3D G3DSA:1.10.3470.10 4 328 2.5E-92 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_1696 a4ba9a5cdcd57e40ed6bc8c38d15e7df 331 Pfam PF01032 FecCD transport family 24 326 3.7E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_1696 a4ba9a5cdcd57e40ed6bc8c38d15e7df 331 SUPERFAMILY SSF81345 7 326 1.44E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2049 cb5f1be8f33aa1c102672ed1bcb51b29 400 SUPERFAMILY SSF53335 119 202 2.24E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2049 cb5f1be8f33aa1c102672ed1bcb51b29 400 Pfam PF13679 Methyltransferase domain 112 230 1.1E-16 T 14-10-2018 IPR025714 Methyltransferase domain VS_2049 cb5f1be8f33aa1c102672ed1bcb51b29 400 Gene3D G3DSA:3.40.50.150 106 251 2.9E-6 T 14-10-2018 VS_1368 fa17b0c34f07bad22097fbf0bec7d169 236 SUPERFAMILY SSF103088 94 221 9.29E-13 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1368 fa17b0c34f07bad22097fbf0bec7d169 236 Gene3D G3DSA:3.30.1330.60 40 230 2.3E-15 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1368 fa17b0c34f07bad22097fbf0bec7d169 236 Pfam PF00691 OmpA family 98 200 1.4E-8 T 14-10-2018 IPR006665 OmpA-like domain VS_1015 4f14cedf143058591622e4098a7030ff 515 SUPERFAMILY SSF52091 416 497 5.49E-9 T 14-10-2018 IPR036513 STAS domain superfamily VS_1015 4f14cedf143058591622e4098a7030ff 515 Gene3D G3DSA:3.30.750.24 409 499 1.9E-25 T 14-10-2018 IPR036513 STAS domain superfamily VS_1015 4f14cedf143058591622e4098a7030ff 515 Pfam PF00916 Sulfate permease family 13 374 4.3E-56 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VS_1180 828542d4a896a2773691b5454ace0f67 364 Gene3D G3DSA:1.10.3720.10 135 325 2.8E-36 T 14-10-2018 IPR035906 MetI-like superfamily VS_1180 828542d4a896a2773691b5454ace0f67 364 SUPERFAMILY SSF161098 138 321 1.44E-41 T 14-10-2018 IPR035906 MetI-like superfamily VS_1180 828542d4a896a2773691b5454ace0f67 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 321 7.5E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1385 c63a30e4dd6928190308265fcd106b23 2085 SMART SM00487 96 328 2.2E-22 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_1385 c63a30e4dd6928190308265fcd106b23 2085 Gene3D G3DSA:3.40.50.300 1008 1149 2.1E-18 T 14-10-2018 VS_1385 c63a30e4dd6928190308265fcd106b23 2085 Pfam PF00271 Helicase conserved C-terminal domain 1055 1122 3.7E-10 T 14-10-2018 IPR001650 Helicase, C-terminal VS_1385 c63a30e4dd6928190308265fcd106b23 2085 Gene3D G3DSA:3.40.50.300 81 317 9.0E-38 T 14-10-2018 VS_1385 c63a30e4dd6928190308265fcd106b23 2085 Pfam PF00270 DEAD/DEAH box helicase 102 302 3.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_1385 c63a30e4dd6928190308265fcd106b23 2085 SUPERFAMILY SSF52540 154 1141 1.08E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1385 c63a30e4dd6928190308265fcd106b23 2085 Pfam PF09369 Domain of unknown function (DUF1998) 1605 1683 7.4E-8 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative VS_1385 c63a30e4dd6928190308265fcd106b23 2085 SMART SM00490 1027 1123 2.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 SUPERFAMILY SSF54913 1 112 4.13E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 PIRSF PIRSF039144 1 112 1.1E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 Gene3D G3DSA:3.30.70.120 1 112 2.2E-46 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 SMART SM00938 4 105 4.2E-69 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 PRINTS PR00340 P-II protein signature 23 41 5.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 PRINTS PR00340 P-II protein signature 83 103 5.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 PRINTS PR00340 P-II protein signature 2 17 5.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 PRINTS PR00340 P-II protein signature 52 75 5.2E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VS_2520 2178898c2e5c01d76afce80ff1877fa3 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VS_II0243 cd82010e0c6c5d7b41349822b5734b53 264 SUPERFAMILY SSF54060 36 251 2.59E-47 T 14-10-2018 VS_II0243 cd82010e0c6c5d7b41349822b5734b53 264 Pfam PF04231 Endonuclease I 39 251 6.9E-41 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 VS_0984 1317a5474bb1a202472c581635fb8876 295 Gene3D G3DSA:3.40.50.12300 5 294 1.9E-80 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily VS_0984 1317a5474bb1a202472c581635fb8876 295 Pfam PF01933 Uncharacterised protein family UPF0052 9 257 1.4E-74 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VS_0984 1317a5474bb1a202472c581635fb8876 295 SUPERFAMILY SSF142338 7 291 1.44E-83 T 14-10-2018 VS_0984 1317a5474bb1a202472c581635fb8876 295 Hamap MF_00973 Gluconeogenesis factor. 5 295 29.713 T 14-10-2018 IPR010119 Gluconeogenesis factor VS_0984 1317a5474bb1a202472c581635fb8876 295 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 270 5.6E-103 T 14-10-2018 IPR010119 Gluconeogenesis factor VS_II0086 5e88f635581c12df333196fc750f428b 92 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 73 4.7E-16 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VS_II0086 5e88f635581c12df333196fc750f428b 92 SUPERFAMILY SSF143120 10 80 1.44E-16 T 14-10-2018 IPR036165 YefM-like superfamily VS_II0086 5e88f635581c12df333196fc750f428b 92 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 1.5E-12 T 14-10-2018 VS_II0086 5e88f635581c12df333196fc750f428b 92 Gene3D G3DSA:3.40.1620.40 12 74 2.9E-10 T 14-10-2018 VS_II0316 773e6297416221968c5584dc7b40085f 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 2.1E-139 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VS_II0316 773e6297416221968c5584dc7b40085f 402 Pfam PF07670 Nucleoside recognition 90 185 2.4E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_II0316 773e6297416221968c5584dc7b40085f 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 7.9E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VS_II0316 773e6297416221968c5584dc7b40085f 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 2.1E-71 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VS_1444 d6fd86faf1cd23ba5f27d075e9199d2a 100 Gene3D G3DSA:3.30.2310.20 1 96 2.5E-26 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VS_1444 d6fd86faf1cd23ba5f27d075e9199d2a 100 PIRSF PIRSF029218 1 98 6.1E-31 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 VS_1444 d6fd86faf1cd23ba5f27d075e9199d2a 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 2.9E-20 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 Gene3D G3DSA:3.10.580.10 191 341 2.3E-41 T 14-10-2018 VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 Pfam PF00571 CBS domain 278 328 5.3E-5 T 14-10-2018 IPR000644 CBS domain VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 Pfam PF01595 Domain of unknown function DUF21 5 194 7.3E-44 T 14-10-2018 IPR002550 CNNM, transmembrane domain VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 SMART SM00116 218 267 7.3 T 14-10-2018 IPR000644 CBS domain VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 SMART SM00116 280 328 0.18 T 14-10-2018 IPR000644 CBS domain VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 Gene3D G3DSA:3.30.465.10 342 422 5.3E-20 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 SUPERFAMILY SSF56176 341 418 1.91E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 SMART SM01091 340 421 2.2E-20 T 14-10-2018 IPR005170 Transporter-associated domain VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 Pfam PF03471 Transporter associated domain 341 419 2.7E-17 T 14-10-2018 IPR005170 Transporter-associated domain VS_0660 e5a0895acdff391e6a0b48dab15929e0 429 SUPERFAMILY SSF54631 196 330 1.77E-27 T 14-10-2018 VS_2533 161b1f987bda57250fd205da8a957a29 296 Gene3D G3DSA:3.40.50.620 1 179 1.6E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2533 161b1f987bda57250fd205da8a957a29 296 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 3.5E-100 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VS_2533 161b1f987bda57250fd205da8a957a29 296 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.149 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VS_2533 161b1f987bda57250fd205da8a957a29 296 SUPERFAMILY SSF52374 1 281 8.04E-106 T 14-10-2018 VS_2533 161b1f987bda57250fd205da8a957a29 296 Gene3D G3DSA:3.30.1300.10 180 283 3.9E-27 T 14-10-2018 VS_2533 161b1f987bda57250fd205da8a957a29 296 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 1.1E-104 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VS_2533 161b1f987bda57250fd205da8a957a29 296 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 4.4E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VS_2381 486ac498a1bf3c5130db385e853bbca6 183 PIRSF PIRSF004682 1 183 1.9E-63 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VS_2381 486ac498a1bf3c5130db385e853bbca6 183 Pfam PF13242 HAD-hyrolase-like 107 174 6.2E-12 T 14-10-2018 VS_2381 486ac498a1bf3c5130db385e853bbca6 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 9.8E-81 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VS_2381 486ac498a1bf3c5130db385e853bbca6 183 Gene3D G3DSA:3.40.50.1000 2 183 1.2E-58 T 14-10-2018 IPR023214 HAD superfamily VS_2381 486ac498a1bf3c5130db385e853bbca6 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 1.8E-34 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VS_2381 486ac498a1bf3c5130db385e853bbca6 183 SUPERFAMILY SSF56784 3 182 5.47E-47 T 14-10-2018 IPR036412 HAD-like superfamily VS_2381 486ac498a1bf3c5130db385e853bbca6 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 1.9E-37 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VS_2594 692b29080b11d73f0945aa2140871a76 353 SUPERFAMILY SSF53067 173 342 8.91E-24 T 14-10-2018 VS_2594 692b29080b11d73f0945aa2140871a76 353 Pfam PF00480 ROK family 172 344 1.7E-18 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VS_2594 692b29080b11d73f0945aa2140871a76 353 Gene3D G3DSA:3.30.420.40 157 351 7.1E-17 T 14-10-2018 VS_1237 948ca8cf55cdf8fbd7b4b32a6fcf8433 499 Gene3D G3DSA:3.40.605.10 49 469 7.5E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VS_1237 948ca8cf55cdf8fbd7b4b32a6fcf8433 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VS_1237 948ca8cf55cdf8fbd7b4b32a6fcf8433 499 PIRSF PIRSF036492 24 499 7.7E-163 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VS_1237 948ca8cf55cdf8fbd7b4b32a6fcf8433 499 Gene3D G3DSA:3.40.309.10 248 449 7.5E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VS_1237 948ca8cf55cdf8fbd7b4b32a6fcf8433 499 Pfam PF00171 Aldehyde dehydrogenase family 33 469 2.2E-92 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VS_1237 948ca8cf55cdf8fbd7b4b32a6fcf8433 499 SUPERFAMILY SSF53720 32 470 6.41E-117 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VS_0472 5c0cc964147fab19260543c4cc18336e 244 SUPERFAMILY SSF56235 13 213 1.74E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0472 5c0cc964147fab19260543c4cc18336e 244 Gene3D G3DSA:3.60.20.10 13 215 4.1E-66 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_0472 5c0cc964147fab19260543c4cc18336e 244 Pfam PF00310 Glutamine amidotransferases class-II 13 211 1.3E-69 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VS_II1094 e8d65e3845b3accb4194b91a00cb3c84 349 Pfam PF14321 Domain of unknown function (DUF4382) 38 205 2.4E-18 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 VS_2274 dff3a3300befd3e88d2316b9586681cc 135 Gene3D G3DSA:3.10.580.10 2 134 1.7E-27 T 14-10-2018 VS_2274 dff3a3300befd3e88d2316b9586681cc 135 SUPERFAMILY SSF54631 4 126 6.7E-26 T 14-10-2018 VS_2274 dff3a3300befd3e88d2316b9586681cc 135 Pfam PF00571 CBS domain 76 125 8.8E-9 T 14-10-2018 IPR000644 CBS domain VS_2274 dff3a3300befd3e88d2316b9586681cc 135 Pfam PF00571 CBS domain 9 64 0.0013 T 14-10-2018 IPR000644 CBS domain VS_2274 dff3a3300befd3e88d2316b9586681cc 135 SMART SM00116 16 65 8.3 T 14-10-2018 IPR000644 CBS domain VS_2274 dff3a3300befd3e88d2316b9586681cc 135 SMART SM00116 83 130 2.9E-4 T 14-10-2018 IPR000644 CBS domain VS_0219 60eab485cabe85628253c03ef4da2d6b 310 Pfam PF01380 SIS domain 38 168 1.2E-29 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VS_0219 60eab485cabe85628253c03ef4da2d6b 310 SUPERFAMILY SSF53697 4 276 8.9E-59 T 14-10-2018 VS_0219 60eab485cabe85628253c03ef4da2d6b 310 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 42 308 2.2E-97 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VS_0219 60eab485cabe85628253c03ef4da2d6b 310 SUPERFAMILY SSF54631 258 308 1.31E-5 T 14-10-2018 VS_0219 60eab485cabe85628253c03ef4da2d6b 310 Gene3D G3DSA:3.40.50.10490 2 192 1.7E-62 T 14-10-2018 VS_0219 60eab485cabe85628253c03ef4da2d6b 310 Pfam PF00571 CBS domain 265 308 2.8E-5 T 14-10-2018 IPR000644 CBS domain VS_0219 60eab485cabe85628253c03ef4da2d6b 310 PIRSF PIRSF004692 1 310 3.7E-123 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VS_0219 60eab485cabe85628253c03ef4da2d6b 310 Gene3D G3DSA:3.10.580.10 193 310 3.7E-26 T 14-10-2018 VS_II0706 cb5ec2db48a729e8ca656d00f18e21f2 410 Pfam PF13692 Glycosyl transferases group 1 197 336 6.0E-20 T 14-10-2018 VS_II0706 cb5ec2db48a729e8ca656d00f18e21f2 410 Gene3D G3DSA:3.40.50.2000 189 355 1.3E-11 T 14-10-2018 VS_II0706 cb5ec2db48a729e8ca656d00f18e21f2 410 SUPERFAMILY SSF53756 7 366 9.42E-20 T 14-10-2018 VS_1953 7004ab79b7ab42776984110b1de0247e 185 Gene3D G3DSA:1.20.120.1760 2 179 7.2E-18 T 14-10-2018 VS_1953 7004ab79b7ab42776984110b1de0247e 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.2E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VS_1953 7004ab79b7ab42776984110b1de0247e 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VS_1953 7004ab79b7ab42776984110b1de0247e 185 PIRSF PIRSF000847 1 184 5.9E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VS_1953 7004ab79b7ab42776984110b1de0247e 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 181 1.9E-55 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VS_0323 95cda9051a3366d78b64a757f17e8bd9 185 Gene3D G3DSA:2.40.50.140 2 147 9.4E-52 T 14-10-2018 VS_0323 95cda9051a3366d78b64a757f17e8bd9 185 PIRSF PIRSF002070 2 181 1.6E-36 T 14-10-2018 VS_0323 95cda9051a3366d78b64a757f17e8bd9 185 Pfam PF00436 Single-strand binding protein family 6 106 3.2E-43 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VS_0323 95cda9051a3366d78b64a757f17e8bd9 185 SUPERFAMILY SSF50249 4 185 2.91E-64 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0323 95cda9051a3366d78b64a757f17e8bd9 185 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.357 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VS_0323 95cda9051a3366d78b64a757f17e8bd9 185 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 185 1.0E-62 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VS_3034 5318a52b21efec97d745138895c81233 113 Gene3D G3DSA:1.10.10.10 4 110 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_3034 5318a52b21efec97d745138895c81233 113 SMART SM00418 5 83 5.6E-25 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_3034 5318a52b21efec97d745138895c81233 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 58 7.1E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_3034 5318a52b21efec97d745138895c81233 113 SUPERFAMILY SSF46785 5 88 5.36E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_3034 5318a52b21efec97d745138895c81233 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_3034 5318a52b21efec97d745138895c81233 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_3034 5318a52b21efec97d745138895c81233 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VS_0925 c22109858d8996ea7ac7dea9e6d4e751 628 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VS_0925 c22109858d8996ea7ac7dea9e6d4e751 628 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 1.1E-159 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_0925 c22109858d8996ea7ac7dea9e6d4e751 628 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 503 7.0E-148 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_1824 3cff91889e442e140d3581b9ec3de54f 384 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 26 383 51.097 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VS_1824 3cff91889e442e140d3581b9ec3de54f 384 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 28 383 4.5E-160 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VS_1824 3cff91889e442e140d3581b9ec3de54f 384 Pfam PF00266 Aminotransferase class-V 28 372 3.2E-60 T 14-10-2018 IPR000192 Aminotransferase class V domain VS_1824 3cff91889e442e140d3581b9ec3de54f 384 Gene3D G3DSA:3.40.640.10 41 281 2.0E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1824 3cff91889e442e140d3581b9ec3de54f 384 Gene3D G3DSA:3.90.1150.10 282 384 1.6E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1824 3cff91889e442e140d3581b9ec3de54f 384 SUPERFAMILY SSF53383 27 382 9.51E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1824 3cff91889e442e140d3581b9ec3de54f 384 PIRSF PIRSF000525 23 384 9.1E-152 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VS_1519 5861d76329628ea4af0d20f806a8fe01 109 Pfam PF13466 STAS domain 15 95 5.6E-10 T 14-10-2018 IPR002645 STAS domain VS_1519 5861d76329628ea4af0d20f806a8fe01 109 Gene3D G3DSA:3.30.750.24 3 107 1.2E-17 T 14-10-2018 IPR036513 STAS domain superfamily VS_1519 5861d76329628ea4af0d20f806a8fe01 109 SUPERFAMILY SSF52091 9 101 3.34E-19 T 14-10-2018 IPR036513 STAS domain superfamily VS_1425 3cd92a7a1b8236c7ff689ce02bca4056 86 Gene3D G3DSA:3.40.30.10 1 85 5.4E-19 T 14-10-2018 VS_1425 3cd92a7a1b8236c7ff689ce02bca4056 86 SUPERFAMILY SSF52833 1 79 6.41E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1425 3cd92a7a1b8236c7ff689ce02bca4056 86 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 78 8.6E-19 T 14-10-2018 IPR008554 Glutaredoxin-like VS_II0271 f08781102cf5320e849422ac80101c55 405 SUPERFAMILY SSF55073 230 385 1.73E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0271 f08781102cf5320e849422ac80101c55 405 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 380 3.8E-45 T 14-10-2018 IPR000160 GGDEF domain VS_II0271 f08781102cf5320e849422ac80101c55 405 Gene3D G3DSA:3.30.70.270 215 385 6.1E-54 T 14-10-2018 VS_II0271 f08781102cf5320e849422ac80101c55 405 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 382 4.9E-53 T 14-10-2018 IPR000160 GGDEF domain VS_II0271 f08781102cf5320e849422ac80101c55 405 SMART SM00267 214 384 1.7E-54 T 14-10-2018 IPR000160 GGDEF domain VS_II1305 e0ae1ad132a99ed45dff510e2c00b838 299 SUPERFAMILY SSF103481 185 285 4.32E-12 T 14-10-2018 VS_II1305 e0ae1ad132a99ed45dff510e2c00b838 299 SUPERFAMILY SSF103481 43 138 1.01E-10 T 14-10-2018 VS_II1305 e0ae1ad132a99ed45dff510e2c00b838 299 Pfam PF00892 EamA-like transporter family 150 283 1.7E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II1305 e0ae1ad132a99ed45dff510e2c00b838 299 Pfam PF00892 EamA-like transporter family 9 135 1.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0851 9aff3dffbb15b3495dd75392f7af0eb2 529 Pfam PF00072 Response regulator receiver domain 11 127 4.6E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0851 9aff3dffbb15b3495dd75392f7af0eb2 529 SMART SM00448 9 127 1.7E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_II0851 9aff3dffbb15b3495dd75392f7af0eb2 529 Gene3D G3DSA:3.40.50.2300 7 140 7.5E-19 T 14-10-2018 VS_II0851 9aff3dffbb15b3495dd75392f7af0eb2 529 SUPERFAMILY SSF52172 7 150 1.05E-21 T 14-10-2018 IPR011006 CheY-like superfamily VS_II1051 e63e4697ded506d0c98380b6c8f41340 547 Gene3D G3DSA:3.40.1350.10 478 547 1.3E-9 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VS_II1051 e63e4697ded506d0c98380b6c8f41340 547 Pfam PF08774 VRR-NUC domain 447 546 5.2E-22 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VS_II1051 e63e4697ded506d0c98380b6c8f41340 547 SMART SM00990 436 547 6.0E-22 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VS_II1329 ed7d1b6e66ad58d6b28a8492e099df1c 110 Gene3D G3DSA:1.10.3730.20 1 110 6.2E-25 T 14-10-2018 VS_II1329 ed7d1b6e66ad58d6b28a8492e099df1c 110 Pfam PF00893 Small Multidrug Resistance protein 1 94 8.7E-17 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VS_II1329 ed7d1b6e66ad58d6b28a8492e099df1c 110 SUPERFAMILY SSF103481 5 108 5.1E-15 T 14-10-2018 VS_II0197 56b1611089d8c9cdf28d2b1eb2360a37 236 Pfam PF01048 Phosphorylase superfamily 17 217 3.9E-35 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VS_II0197 56b1611089d8c9cdf28d2b1eb2360a37 236 SUPERFAMILY SSF53167 3 234 6.28E-92 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VS_II0197 56b1611089d8c9cdf28d2b1eb2360a37 236 Gene3D G3DSA:3.40.50.1580 1 236 1.1E-75 T 14-10-2018 VS_II0197 56b1611089d8c9cdf28d2b1eb2360a37 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.589 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VS_II0197 56b1611089d8c9cdf28d2b1eb2360a37 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 5.6E-113 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VS_0878 88a58bb41295923b47d1f9dc49245af9 370 Pfam PF00005 ABC transporter 21 163 2.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_0878 88a58bb41295923b47d1f9dc49245af9 370 Gene3D G3DSA:3.40.50.300 4 223 4.8E-71 T 14-10-2018 VS_0878 88a58bb41295923b47d1f9dc49245af9 370 SUPERFAMILY SSF50331 238 368 8.02E-24 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_0878 88a58bb41295923b47d1f9dc49245af9 370 Gene3D G3DSA:2.40.50.140 293 352 1.9E-29 T 14-10-2018 VS_0878 88a58bb41295923b47d1f9dc49245af9 370 SUPERFAMILY SSF52540 4 246 9.64E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0878 88a58bb41295923b47d1f9dc49245af9 370 Gene3D G3DSA:2.40.50.940 224 361 1.9E-29 T 14-10-2018 VS_0878 88a58bb41295923b47d1f9dc49245af9 370 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_0878 88a58bb41295923b47d1f9dc49245af9 370 SMART SM00382 30 213 9.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0861 7a0870ec5a66579b8d1a5ed2e6228114 417 Gene3D G3DSA:2.40.160.60 28 417 2.0E-113 T 14-10-2018 VS_0861 7a0870ec5a66579b8d1a5ed2e6228114 417 SUPERFAMILY SSF56935 28 417 6.87E-90 T 14-10-2018 VS_0861 7a0870ec5a66579b8d1a5ed2e6228114 417 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 417 1.5E-121 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VS_1574 e10c4203f725bd212435c0263a8e1ccc 121 Gene3D G3DSA:1.10.760.10 24 121 3.5E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_1574 e10c4203f725bd212435c0263a8e1ccc 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 36 117 7.8E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_1574 e10c4203f725bd212435c0263a8e1ccc 121 SUPERFAMILY SSF46626 11 120 3.3E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 Gene3D G3DSA:1.10.240.10 191 304 6.8E-137 T 14-10-2018 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 336 1.8E-105 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 337 39.529 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 1.4E-75 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 SUPERFAMILY SSF52374 5 336 4.88E-88 T 14-10-2018 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 Gene3D G3DSA:3.40.50.620 5 335 6.8E-137 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.2E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.2E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.2E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_2866 70902d8a75bc8b8d1959ff112b669a10 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.2E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VS_II0999 8bc1b0af45e31a7609ffd50f111e7ae3 665 SMART SM00220 46 295 4.8E-11 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_II0999 8bc1b0af45e31a7609ffd50f111e7ae3 665 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VS_II0999 8bc1b0af45e31a7609ffd50f111e7ae3 665 SUPERFAMILY SSF56112 44 294 8.36E-37 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_II0999 8bc1b0af45e31a7609ffd50f111e7ae3 665 Gene3D G3DSA:1.10.510.10 54 295 4.8E-35 T 14-10-2018 VS_II0999 8bc1b0af45e31a7609ffd50f111e7ae3 665 Pfam PF00069 Protein kinase domain 61 292 6.8E-30 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_1926 8679f1e799856d2d136640f72d304459 146 Gene3D G3DSA:1.10.8.640 37 121 9.9E-33 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VS_1926 8679f1e799856d2d136640f72d304459 146 Pfam PF03918 Cytochrome C biogenesis protein 38 145 8.2E-41 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 Gene3D G3DSA:3.30.70.80 31 103 6.7E-17 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 146 157 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 341 351 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 SUPERFAMILY SSF54897 31 102 1.7E-13 T 14-10-2018 VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 Gene3D G3DSA:3.40.50.200 115 359 9.0E-63 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 Pfam PF05922 Peptidase inhibitor I9 33 101 3.5E-5 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 Pfam PF00082 Subtilase family 148 353 4.8E-32 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 340 356 1.2E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 193 1.2E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 141 160 1.2E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 184 194 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VS_0879 22b822c0403ecc31ba58f2fd1d1504c8 381 SUPERFAMILY SSF52743 145 353 2.36E-53 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VS_2078 201262c7cd71b1bc3fe86bda3ad405d2 463 SUPERFAMILY SSF48452 67 253 1.37E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1774 7e37f23ff4bde9b9dc98708e68bf049a 164 Gene3D G3DSA:2.40.160.20 18 163 4.9E-20 T 14-10-2018 VS_1774 7e37f23ff4bde9b9dc98708e68bf049a 164 Pfam PF13505 Outer membrane protein beta-barrel domain 5 156 8.0E-12 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VS_1774 7e37f23ff4bde9b9dc98708e68bf049a 164 SUPERFAMILY SSF56925 18 156 2.88E-18 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_II0059 b09840dce561bfe54d6070127772cb41 323 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 289 6.9E-60 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VS_II0059 b09840dce561bfe54d6070127772cb41 323 Gene3D G3DSA:3.40.190.10 38 299 2.3E-95 T 14-10-2018 VS_II0059 b09840dce561bfe54d6070127772cb41 323 SUPERFAMILY SSF53850 32 306 4.34E-87 T 14-10-2018 VS_II0059 b09840dce561bfe54d6070127772cb41 323 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 30 317 2.0E-144 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 VS_II0059 b09840dce561bfe54d6070127772cb41 323 Gene3D G3DSA:3.40.190.100 119 228 2.3E-95 T 14-10-2018 VS_II1166 e17edd87c83305e486dd6a6357dd6885 615 Pfam PF01432 Peptidase family M3 285 549 4.4E-15 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VS_II1166 e17edd87c83305e486dd6a6357dd6885 615 Gene3D G3DSA:1.10.1370.30 35 307 7.3E-7 T 14-10-2018 VS_II1166 e17edd87c83305e486dd6a6357dd6885 615 SUPERFAMILY SSF55486 3 550 8.06E-73 T 14-10-2018 VS_II1166 e17edd87c83305e486dd6a6357dd6885 615 Gene3D G3DSA:1.10.1370.20 320 500 7.2E-10 T 14-10-2018 VS_2582 d0887b8164234033848e43cb6d707c3d 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 379 4.5E-72 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_2582 d0887b8164234033848e43cb6d707c3d 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_2582 d0887b8164234033848e43cb6d707c3d 395 Pfam PF00696 Amino acid kinase family 5 231 3.7E-51 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VS_2582 d0887b8164234033848e43cb6d707c3d 395 Gene3D G3DSA:3.40.1160.10 3 257 8.7E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_2582 d0887b8164234033848e43cb6d707c3d 395 SUPERFAMILY SSF53633 6 244 2.49E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VS_II0406 c9a105f023238d26868d485d506a4c83 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 175 2.0E-19 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VS_0235 d026cba2057b881968bdc2b99672f3c4 510 SUPERFAMILY SSF53649 5 508 5.76E-74 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.3E-224 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 Pfam PF01676 Metalloenzyme superfamily 5 497 8.5E-80 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 Gene3D G3DSA:3.40.720.10 6 506 4.2E-208 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 PIRSF PIRSF001492 1 510 2.3E-198 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 4.2E-78 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 Gene3D G3DSA:3.40.1450.10 78 310 4.2E-208 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 SUPERFAMILY SSF64158 78 308 8.63E-80 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_0235 d026cba2057b881968bdc2b99672f3c4 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.048 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VS_II0202 36c09482cadd6f9b2b5f95a4c0f41c35 313 Pfam PF00561 alpha/beta hydrolase fold 37 139 8.3E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_II0202 36c09482cadd6f9b2b5f95a4c0f41c35 313 Gene3D G3DSA:3.40.50.1820 29 313 1.1E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0202 36c09482cadd6f9b2b5f95a4c0f41c35 313 SUPERFAMILY SSF53474 33 309 1.03E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1257 5fc5baecad2f75aa97321f18f122740b 590 Pfam PF00474 Sodium:solute symporter family 32 417 5.0E-39 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VS_1257 5fc5baecad2f75aa97321f18f122740b 590 Gene3D G3DSA:1.20.1730.10 21 494 2.2E-85 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VS_II0326 3f5e39acecdc81e6613597d748c67907 76 PRINTS PR00050 Cold shock protein signature 34 43 4.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0326 3f5e39acecdc81e6613597d748c67907 76 PRINTS PR00050 Cold shock protein signature 13 28 4.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0326 3f5e39acecdc81e6613597d748c67907 76 PRINTS PR00050 Cold shock protein signature 49 67 4.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0326 3f5e39acecdc81e6613597d748c67907 76 Gene3D G3DSA:2.40.50.140 8 75 1.8E-29 T 14-10-2018 VS_II0326 3f5e39acecdc81e6613597d748c67907 76 Pfam PF00313 'Cold-shock' DNA-binding domain 12 75 2.4E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_II0326 3f5e39acecdc81e6613597d748c67907 76 ProSitePatterns PS00352 'Cold-shock' domain signature. 24 43 - T 14-10-2018 IPR019844 Cold-shock conserved site VS_II0326 3f5e39acecdc81e6613597d748c67907 76 SUPERFAMILY SSF50249 7 74 8.36E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_II0326 3f5e39acecdc81e6613597d748c67907 76 PIRSF PIRSF002599 6 76 1.0E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VS_II0326 3f5e39acecdc81e6613597d748c67907 76 SMART SM00357 12 76 1.4E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_II0751 5b8eeb6e72e3f1e16db45f42e43eb182 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 152 4.5E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_II0751 5b8eeb6e72e3f1e16db45f42e43eb182 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 5.5E-109 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VS_II0751 5b8eeb6e72e3f1e16db45f42e43eb182 712 Gene3D G3DSA:2.40.170.20 172 712 1.2E-107 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_II0751 5b8eeb6e72e3f1e16db45f42e43eb182 712 Pfam PF00593 TonB dependent receptor 252 710 4.3E-54 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_II0751 5b8eeb6e72e3f1e16db45f42e43eb182 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 29 712 9.2E-130 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VS_II0751 5b8eeb6e72e3f1e16db45f42e43eb182 712 Gene3D G3DSA:2.170.130.10 28 157 7.9E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_II0751 5b8eeb6e72e3f1e16db45f42e43eb182 712 SUPERFAMILY SSF56935 29 712 2.34E-112 T 14-10-2018 VS_II1033 f7924f40cd545449b3947fdd7c58afff 325 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 311 2.9E-100 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VS_II1033 f7924f40cd545449b3947fdd7c58afff 325 PIRSF PIRSF000535 5 314 9.1E-93 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VS_II1033 f7924f40cd545449b3947fdd7c58afff 325 Gene3D G3DSA:3.40.1190.20 6 314 1.4E-92 T 14-10-2018 IPR029056 Ribokinase-like VS_II1033 f7924f40cd545449b3947fdd7c58afff 325 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 42 66 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VS_II1033 f7924f40cd545449b3947fdd7c58afff 325 SUPERFAMILY SSF53613 9 295 1.09E-68 T 14-10-2018 IPR029056 Ribokinase-like VS_II1033 f7924f40cd545449b3947fdd7c58afff 325 Pfam PF00294 pfkB family carbohydrate kinase 30 296 4.7E-49 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VS_II1033 f7924f40cd545449b3947fdd7c58afff 325 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 311 2.8E-101 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 Gene3D G3DSA:3.60.21.10 4 295 2.8E-61 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_II0782 917c99dd4d583666cb234bd4590e995b 508 Gene3D G3DSA:3.90.780.10 296 503 1.5E-35 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 SUPERFAMILY SSF55816 295 492 5.1E-39 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 SUPERFAMILY SSF56300 11 250 6.83E-53 T 14-10-2018 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 Pfam PF02872 5'-nucleotidase, C-terminal domain 297 466 3.1E-21 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 PRINTS PR01607 Apyrase family signature 161 184 7.2E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 PRINTS PR01607 Apyrase family signature 201 221 7.2E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 PRINTS PR01607 Apyrase family signature 441 460 7.2E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_II0782 917c99dd4d583666cb234bd4590e995b 508 PRINTS PR01607 Apyrase family signature 142 159 7.2E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VS_II1364 39fe86eaaa7259f6dd193ceb3fe47336 102 Gene3D G3DSA:3.30.70.100 1 94 1.8E-24 T 14-10-2018 VS_II1364 39fe86eaaa7259f6dd193ceb3fe47336 102 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 66 4.8E-11 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VS_II1364 39fe86eaaa7259f6dd193ceb3fe47336 102 SUPERFAMILY SSF54909 3 95 1.79E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0812 dc08244b3b37299181b705637770b1a8 136 SUPERFAMILY SSF75620 7 124 4.32E-13 T 14-10-2018 VS_II0812 dc08244b3b37299181b705637770b1a8 136 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VS_II0812 dc08244b3b37299181b705637770b1a8 136 Gene3D G3DSA:3.30.160.20 1 136 1.4E-40 T 14-10-2018 VS_II0812 dc08244b3b37299181b705637770b1a8 136 Pfam PF00472 RF-1 domain 7 132 1.8E-25 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VS_II1287 62f907adb540fd32019ee838a48107de 413 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 73 400 1.3E-24 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VS_II1287 62f907adb540fd32019ee838a48107de 413 Gene3D G3DSA:3.20.20.190 67 407 2.5E-43 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VS_II1287 62f907adb540fd32019ee838a48107de 413 SUPERFAMILY SSF51695 71 406 1.07E-64 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 SUPERFAMILY SSF52821 162 283 1.44E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 SMART SM00450 159 280 5.2E-15 T 14-10-2018 IPR001763 Rhodanese-like domain VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 SMART SM00450 12 135 1.1E-14 T 14-10-2018 IPR001763 Rhodanese-like domain VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 Pfam PF00581 Rhodanese-like domain 12 130 7.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 Pfam PF00581 Rhodanese-like domain 165 276 9.8E-10 T 14-10-2018 IPR001763 Rhodanese-like domain VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 SUPERFAMILY SSF52821 6 141 5.37E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 Gene3D G3DSA:3.40.250.10 6 152 2.6E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_II0483 3ef5ce2288f7483ef24e8dc08f6ebf75 287 Gene3D G3DSA:3.40.250.10 161 286 4.8E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_0083 f1e67c3f6eb0c68a5338e2ea06c16e18 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 8 272 41.266 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VS_0083 f1e67c3f6eb0c68a5338e2ea06c16e18 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 247 253 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_0083 f1e67c3f6eb0c68a5338e2ea06c16e18 285 SUPERFAMILY SSF53335 15 281 1.4E-95 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0083 f1e67c3f6eb0c68a5338e2ea06c16e18 285 Gene3D G3DSA:3.40.50.150 7 285 8.9E-115 T 14-10-2018 VS_0083 f1e67c3f6eb0c68a5338e2ea06c16e18 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 39 283 8.8E-115 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VS_2367 0507c59d1ff7bee7d8ef44247460ccd6 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 2.1E-37 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain VS_2367 0507c59d1ff7bee7d8ef44247460ccd6 231 Gene3D G3DSA:2.40.30.70 22 143 1.3E-44 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily VS_2367 0507c59d1ff7bee7d8ef44247460ccd6 231 Gene3D G3DSA:3.30.2310.10 144 227 1.4E-18 T 14-10-2018 VS_2367 0507c59d1ff7bee7d8ef44247460ccd6 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VS_2367 0507c59d1ff7bee7d8ef44247460ccd6 231 SUPERFAMILY SSF118196 1 226 4.32E-78 T 14-10-2018 IPR036413 YaeB-like superfamily VS_2367 0507c59d1ff7bee7d8ef44247460ccd6 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 146 5.1E-47 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain VS_2832 a7626d1c4c8c2efffa0ab98cbdf8ff47 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.317 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2832 a7626d1c4c8c2efffa0ab98cbdf8ff47 209 SUPERFAMILY SSF50447 1 208 1.06E-83 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VS_2832 a7626d1c4c8c2efffa0ab98cbdf8ff47 209 Pfam PF00297 Ribosomal protein L3 98 182 1.1E-15 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2832 a7626d1c4c8c2efffa0ab98cbdf8ff47 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.7E-94 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2832 a7626d1c4c8c2efffa0ab98cbdf8ff47 209 Gene3D G3DSA:2.40.30.10 130 209 7.0E-20 T 14-10-2018 VS_2832 a7626d1c4c8c2efffa0ab98cbdf8ff47 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site VS_2832 a7626d1c4c8c2efffa0ab98cbdf8ff47 209 Gene3D G3DSA:2.40.50.620 33 96 2.7E-15 T 14-10-2018 VS_2815 9a7a12ae5565ba859b1e97211eac49dc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 2.3E-42 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2815 9a7a12ae5565ba859b1e97211eac49dc 117 SUPERFAMILY SSF53137 3 115 1.81E-50 T 14-10-2018 VS_2815 9a7a12ae5565ba859b1e97211eac49dc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.62 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2815 9a7a12ae5565ba859b1e97211eac49dc 117 Gene3D G3DSA:3.30.420.100 1 117 7.7E-44 T 14-10-2018 VS_2815 9a7a12ae5565ba859b1e97211eac49dc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.3E-42 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0106 fb07547b1de659cb5f6efb357be7d138 146 Gene3D G3DSA:3.40.630.30 5 144 6.9E-13 T 14-10-2018 VS_0106 fb07547b1de659cb5f6efb357be7d138 146 Pfam PF00583 Acetyltransferase (GNAT) family 29 104 1.3E-5 T 14-10-2018 IPR000182 GNAT domain VS_0106 fb07547b1de659cb5f6efb357be7d138 146 SUPERFAMILY SSF55729 1 134 8.15E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0612 4338e79aefa3f948adc143e43b5f30be 343 PIRSF PIRSF006230 31 309 3.6E-106 T 14-10-2018 IPR016478 GTPase, MTG1 VS_II0612 4338e79aefa3f948adc143e43b5f30be 343 Gene3D G3DSA:3.40.50.300 35 203 3.3E-44 T 14-10-2018 VS_II0612 4338e79aefa3f948adc143e43b5f30be 343 Gene3D G3DSA:1.10.1580.10 206 297 7.6E-28 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VS_II0612 4338e79aefa3f948adc143e43b5f30be 343 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 35 304 2.8E-107 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VS_II0612 4338e79aefa3f948adc143e43b5f30be 343 Pfam PF01926 50S ribosome-binding GTPase 149 214 1.9E-13 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VS_II0612 4338e79aefa3f948adc143e43b5f30be 343 SUPERFAMILY SSF52540 41 216 5.16E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0934 1190c8098423d8cc50d7f20e4ff14b86 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 357 2.4E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0934 1190c8098423d8cc50d7f20e4ff14b86 362 SUPERFAMILY SSF161098 126 344 6.67E-17 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0934 1190c8098423d8cc50d7f20e4ff14b86 362 Gene3D G3DSA:1.10.3720.10 121 353 4.5E-20 T 14-10-2018 IPR035906 MetI-like superfamily VS_2737 6bdef96e3922a3ab67d04f5f945dffab 138 SUPERFAMILY SSF89946 9 126 9.02E-39 T 14-10-2018 IPR036701 RraB-like superfamily VS_2737 6bdef96e3922a3ab67d04f5f945dffab 138 Gene3D G3DSA:3.30.70.970 1 131 3.5E-57 T 14-10-2018 IPR036701 RraB-like superfamily VS_2737 6bdef96e3922a3ab67d04f5f945dffab 138 PIRSF PIRSF018193 8 138 2.2E-57 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VS_2737 6bdef96e3922a3ab67d04f5f945dffab 138 Pfam PF06877 Regulator of ribonuclease activity B 20 120 1.5E-32 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain VS_2737 6bdef96e3922a3ab67d04f5f945dffab 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 28.703 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VS_II0362 8dc197d0cd4eef8aae7f83c66233f22c 201 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 12 178 1.7E-29 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VS_II0362 8dc197d0cd4eef8aae7f83c66233f22c 201 SUPERFAMILY SSF56529 9 186 3.01E-47 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VS_II0362 8dc197d0cd4eef8aae7f83c66233f22c 201 Gene3D G3DSA:3.90.850.10 3 201 1.6E-47 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VS_II0696 886bc1721cce3f0c92cde8940cbc45b1 131 Pfam PF11756 Nitrous oxide-stimulated promoter 12 116 3.4E-45 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA VS_II0696 886bc1721cce3f0c92cde8940cbc45b1 131 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 11 107 6.0E-39 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA VS_II0790 af34ac5215eb052a0c93a572d74bf7cd 95 SUPERFAMILY SSF81342 3 76 9.42E-18 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VS_II0790 af34ac5215eb052a0c93a572d74bf7cd 95 Gene3D G3DSA:1.20.950.20 1 93 2.9E-7 T 14-10-2018 VS_II0790 af34ac5215eb052a0c93a572d74bf7cd 95 Pfam PF01292 Prokaryotic cytochrome b561 8 68 3.2E-13 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VS_II0369 5f1150726f263cf622b4af3e54ffd415 320 Pfam PF02104 SURF1 family 73 295 1.4E-20 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0741 b44021cc334dafbf3cfda072565857fc 438 SMART SM00267 270 437 4.3E-33 T 14-10-2018 IPR000160 GGDEF domain VS_II0741 b44021cc334dafbf3cfda072565857fc 438 SUPERFAMILY SSF55073 286 435 1.65E-34 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0741 b44021cc334dafbf3cfda072565857fc 438 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 278 435 1.2E-33 T 14-10-2018 IPR000160 GGDEF domain VS_II0741 b44021cc334dafbf3cfda072565857fc 438 Pfam PF00990 Diguanylate cyclase, GGDEF domain 281 433 3.5E-32 T 14-10-2018 IPR000160 GGDEF domain VS_II0741 b44021cc334dafbf3cfda072565857fc 438 Gene3D G3DSA:3.30.70.270 266 436 5.1E-42 T 14-10-2018 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Pfam PF02563 Polysaccharide biosynthesis/export protein 28 97 1.5E-9 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Gene3D G3DSA:3.30.1950.10 42 100 2.8E-15 T 14-10-2018 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Gene3D G3DSA:3.10.560.10 581 670 2.4E-17 T 14-10-2018 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Gene3D G3DSA:3.10.560.10 481 575 2.6E-17 T 14-10-2018 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Gene3D G3DSA:3.10.560.10 288 377 8.3E-16 T 14-10-2018 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Gene3D G3DSA:3.10.560.10 198 287 1.4E-17 T 14-10-2018 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Gene3D G3DSA:3.10.560.10 388 473 7.7E-11 T 14-10-2018 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Pfam PF10531 SLBB domain 395 439 5.8E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Pfam PF10531 SLBB domain 211 252 1.6E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Pfam PF10531 SLBB domain 299 350 9.4E-11 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Pfam PF10531 SLBB domain 589 631 3.2E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Pfam PF10531 SLBB domain 494 538 6.9E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Pfam PF10531 SLBB domain 103 147 7.6E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VS_1521 9879be4608bdf005b07d2d8e000d2fd8 699 Gene3D G3DSA:3.10.560.10 101 181 2.8E-15 T 14-10-2018 VS_1416 ebeab8d8d83bb7f59bb32dd133619797 207 Pfam PF17516 ProQ C-terminal domain 158 206 1.3E-20 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VS_1416 ebeab8d8d83bb7f59bb32dd133619797 207 SUPERFAMILY SSF48657 5 119 1.31E-39 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VS_1416 ebeab8d8d83bb7f59bb32dd133619797 207 Pfam PF04352 ProQ/FINO family 8 115 3.3E-43 T 14-10-2018 IPR016103 ProQ/FinO domain VS_1416 ebeab8d8d83bb7f59bb32dd133619797 207 Gene3D G3DSA:1.10.1710.10 1 119 1.5E-25 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VS_1416 ebeab8d8d83bb7f59bb32dd133619797 207 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 207 29.831 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VS_1416 ebeab8d8d83bb7f59bb32dd133619797 207 SMART SM00945 5 119 4.2E-64 T 14-10-2018 IPR016103 ProQ/FinO domain VS_2622 6652e0d52104f11d30e0fe58fa25f960 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 16 149 2.3E-31 T 14-10-2018 VS_2622 6652e0d52104f11d30e0fe58fa25f960 156 PIRSF PIRSF004923 1 156 4.1E-38 T 14-10-2018 IPR026268 Protein RseC VS_1493 5fcf0280b53c512d9dd3c057ac797255 207 SMART SM00382 23 191 9.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1493 5fcf0280b53c512d9dd3c057ac797255 207 Pfam PF00005 ABC transporter 21 146 3.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1493 5fcf0280b53c512d9dd3c057ac797255 207 Gene3D G3DSA:3.40.50.300 1 207 6.8E-47 T 14-10-2018 VS_1493 5fcf0280b53c512d9dd3c057ac797255 207 SUPERFAMILY SSF52540 14 194 1.6E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 Pfam PF00557 Metallopeptidase family M24 309 524 5.2E-42 T 14-10-2018 IPR000994 Peptidase M24 VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.0E-33 T 14-10-2018 VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 SUPERFAMILY SSF53092 6 130 3.14E-17 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 Gene3D G3DSA:3.40.350.10 147 291 4.7E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 SUPERFAMILY SSF55920 303 559 1.83E-53 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 Gene3D G3DSA:3.90.230.10 300 593 7.2E-93 T 14-10-2018 VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 Gene3D G3DSA:3.40.350.10 2 146 1.2E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 138 2.0E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VS_3092 e12cd02c14d15d87d31774a1fd48a0e6 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 2.5E-22 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain VS_II0573 b62ec60448a4080b7b422e5c5d5db5cb 227 Pfam PF06468 Spondin_N 40 157 2.1E-9 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VS_II0573 b62ec60448a4080b7b422e5c5d5db5cb 227 Gene3D G3DSA:2.60.40.2130 27 167 2.0E-10 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VS_3143 d456b31521d386e855eb161347ab65fb 548 SUPERFAMILY SSF52467 183 342 8.26E-55 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VS_3143 d456b31521d386e855eb161347ab65fb 548 SUPERFAMILY SSF52518 358 546 9.32E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_3143 d456b31521d386e855eb161347ab65fb 548 Gene3D G3DSA:3.40.50.970 348 548 3.2E-63 T 14-10-2018 VS_3143 d456b31521d386e855eb161347ab65fb 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VS_3143 d456b31521d386e855eb161347ab65fb 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.9E-207 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VS_3143 d456b31521d386e855eb161347ab65fb 548 SUPERFAMILY SSF52518 1 176 9.43E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VS_3143 d456b31521d386e855eb161347ab65fb 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.2E-54 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VS_3143 d456b31521d386e855eb161347ab65fb 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.2E-47 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VS_3143 d456b31521d386e855eb161347ab65fb 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 3.0E-40 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VS_3143 d456b31521d386e855eb161347ab65fb 548 Gene3D G3DSA:3.40.50.970 1 177 3.2E-67 T 14-10-2018 VS_3143 d456b31521d386e855eb161347ab65fb 548 Gene3D G3DSA:3.40.50.1220 181 342 7.6E-50 T 14-10-2018 VS_II0418 93921b4f23bc1eae704cc7b1646dde92 703 Pfam PF16130 Domain of unknown function (DUF4842) 455 690 2.7E-54 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 VS_II0418 93921b4f23bc1eae704cc7b1646dde92 703 TIGRFAM TIGR04456 LruC_dom: LruC domain 422 691 1.1E-63 T 14-10-2018 IPR031025 LruC domain VS_II0453 ff3e47989ae95d91a33a6449188a47aa 203 Pfam PF13489 Methyltransferase domain 36 145 1.6E-13 T 14-10-2018 VS_II0453 ff3e47989ae95d91a33a6449188a47aa 203 SUPERFAMILY SSF53335 8 197 8.13E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II0453 ff3e47989ae95d91a33a6449188a47aa 203 Gene3D G3DSA:3.40.50.150 2 180 4.5E-26 T 14-10-2018 VS_II0823 1072a44640c562ef28389b9357cc2191 86 Pfam PF00665 Integrase core domain 1 63 1.9E-15 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_II0823 1072a44640c562ef28389b9357cc2191 86 Gene3D G3DSA:3.30.420.10 1 82 7.0E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_II0823 1072a44640c562ef28389b9357cc2191 86 SUPERFAMILY SSF53098 7 74 5.77E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_II0691 975ea8210e86a2c5dc9148960c904331 244 SMART SM00382 30 208 2.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0691 975ea8210e86a2c5dc9148960c904331 244 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II0691 975ea8210e86a2c5dc9148960c904331 244 Gene3D G3DSA:3.40.50.300 4 243 2.1E-52 T 14-10-2018 VS_II0691 975ea8210e86a2c5dc9148960c904331 244 Pfam PF00005 ABC transporter 21 160 1.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0691 975ea8210e86a2c5dc9148960c904331 244 SUPERFAMILY SSF52540 5 222 2.56E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0526 a005703b2c4d3ec73d2e3cf6f0c0a963 164 SUPERFAMILY SSF55729 56 147 4.61E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0526 a005703b2c4d3ec73d2e3cf6f0c0a963 164 Gene3D G3DSA:3.40.630.30 1 141 4.2E-17 T 14-10-2018 VS_II0526 a005703b2c4d3ec73d2e3cf6f0c0a963 164 Pfam PF00583 Acetyltransferase (GNAT) family 57 140 6.1E-7 T 14-10-2018 IPR000182 GNAT domain VS_1623 9014b33473e4a81cea2651ddd202a380 47 PIRSF PIRSF037205 1 47 4.3E-23 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 VS_1623 9014b33473e4a81cea2651ddd202a380 47 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 3 42 4.8E-21 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 VS_2300 fc4a5ea7b061546627957b298d7f8bff 115 SUPERFAMILY SSF52833 2 114 2.11E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2300 fc4a5ea7b061546627957b298d7f8bff 115 Pfam PF03960 ArsC family 7 113 7.8E-19 T 14-10-2018 IPR006660 Arsenate reductase-like VS_2300 fc4a5ea7b061546627957b298d7f8bff 115 Gene3D G3DSA:3.40.30.10 2 115 2.8E-42 T 14-10-2018 VS_2300 fc4a5ea7b061546627957b298d7f8bff 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 8.7E-33 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR VS_2931 bc2932458a270cfcd7e441110743d265 209 Pfam PF00072 Response regulator receiver domain 7 119 3.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2931 bc2932458a270cfcd7e441110743d265 209 SMART SM00421 147 204 4.3E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_2931 bc2932458a270cfcd7e441110743d265 209 Gene3D G3DSA:3.40.50.2300 3 132 6.8E-27 T 14-10-2018 VS_2931 bc2932458a270cfcd7e441110743d265 209 SUPERFAMILY SSF52172 4 168 2.57E-26 T 14-10-2018 IPR011006 CheY-like superfamily VS_2931 bc2932458a270cfcd7e441110743d265 209 Gene3D G3DSA:1.10.10.10 148 209 2.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2931 bc2932458a270cfcd7e441110743d265 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_2931 bc2932458a270cfcd7e441110743d265 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_2931 bc2932458a270cfcd7e441110743d265 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_2931 bc2932458a270cfcd7e441110743d265 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 8.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_2931 bc2932458a270cfcd7e441110743d265 209 SMART SM00448 5 119 6.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_2931 bc2932458a270cfcd7e441110743d265 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II0184 f712faed45f2078b33100cccdaa39420 817 Gene3D G3DSA:3.40.50.2000 475 797 1.3E-138 T 14-10-2018 VS_II0184 f712faed45f2078b33100cccdaa39420 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VS_II0184 f712faed45f2078b33100cccdaa39420 817 PIRSF PIRSF000460 1 817 3.1E-211 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VS_II0184 f712faed45f2078b33100cccdaa39420 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VS_II0184 f712faed45f2078b33100cccdaa39420 817 Gene3D G3DSA:3.40.50.2000 5 474 8.3E-193 T 14-10-2018 VS_II0184 f712faed45f2078b33100cccdaa39420 817 SUPERFAMILY SSF53756 8 816 0.0 T 14-10-2018 VS_II0184 f712faed45f2078b33100cccdaa39420 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VS_II0588 bbaea756ed4c142fff5fc93a9b2c510d 320 PIRSF PIRSF028696 1 320 1.4E-88 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VS_II0588 bbaea756ed4c142fff5fc93a9b2c510d 320 Pfam PF11059 Protein of unknown function (DUF2860) 25 319 1.5E-109 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VS_II1340 6b2cc0bf8e7acbfd3a18dbc450af66e5 77 SMART SM00530 6 62 1.4E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II1340 6b2cc0bf8e7acbfd3a18dbc450af66e5 77 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 6.3E-23 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_II1340 6b2cc0bf8e7acbfd3a18dbc450af66e5 77 Gene3D G3DSA:1.10.260.40 2 72 1.1E-9 T 14-10-2018 VS_II1340 6b2cc0bf8e7acbfd3a18dbc450af66e5 77 SUPERFAMILY SSF47413 1 70 7.32E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_2077 4a5c66f8aaa113a3671974ededfd3b3f 127 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.0E-28 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 VS_2077 4a5c66f8aaa113a3671974ededfd3b3f 127 Gene3D G3DSA:2.60.40.3230 18 127 6.9E-28 T 14-10-2018 IPR038483 YcfL-like superfamily VS_2955 7429612f0ba5edbc9827ef945848f2c6 383 Pfam PF01595 Domain of unknown function DUF21 10 177 2.6E-29 T 14-10-2018 IPR002550 CNNM, transmembrane domain VS_2955 7429612f0ba5edbc9827ef945848f2c6 383 SUPERFAMILY SSF54631 181 315 8.96E-26 T 14-10-2018 VS_2955 7429612f0ba5edbc9827ef945848f2c6 383 Gene3D G3DSA:3.10.580.10 186 315 6.0E-39 T 14-10-2018 VS_2955 7429612f0ba5edbc9827ef945848f2c6 383 Pfam PF00571 CBS domain 260 313 1.2E-6 T 14-10-2018 IPR000644 CBS domain VS_II0771 8373f836436499407ef788a3620ae8ee 262 Gene3D G3DSA:3.30.2010.10 54 138 3.0E-8 T 14-10-2018 VS_II0771 8373f836436499407ef788a3620ae8ee 262 Pfam PF01435 Peptidase family M48 61 245 6.9E-46 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VS_II1248 cb55fde7102a2cdd7d5e4005a18ea0e1 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 26.519 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VS_II1248 cb55fde7102a2cdd7d5e4005a18ea0e1 199 SUPERFAMILY SSF75217 1 198 4.97E-66 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_II1248 cb55fde7102a2cdd7d5e4005a18ea0e1 199 Gene3D G3DSA:3.40.1280.10 1 199 2.1E-58 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_II1248 cb55fde7102a2cdd7d5e4005a18ea0e1 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 197 1.7E-64 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VS_0104 6131f905a3ea5e3f968734e286492d61 253 Gene3D G3DSA:3.20.20.140 1 252 6.6E-79 T 14-10-2018 VS_0104 6131f905a3ea5e3f968734e286492d61 253 SUPERFAMILY SSF51556 1 253 4.77E-79 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_0104 6131f905a3ea5e3f968734e286492d61 253 Pfam PF01026 TatD related DNase 2 251 5.4E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 VS_0104 6131f905a3ea5e3f968734e286492d61 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 5.1E-72 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VS_0104 6131f905a3ea5e3f968734e286492d61 253 PIRSF PIRSF005902 1 253 7.9E-72 T 14-10-2018 IPR001130 TatD family GO:0016788 VS_II0432 85d2c29ddf97493bbf9ff62e1bca76d1 511 Pfam PF03929 PepSY-associated TM region 44 448 3.7E-60 T 14-10-2018 IPR005625 PepSY-associated TM protein VS_1111 787cab8d13c3d58228a9ea7a5353eecc 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 99 7.0E-38 T 14-10-2018 IPR011846 Cyd operon protein YbgE VS_1111 787cab8d13c3d58228a9ea7a5353eecc 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 2.5E-29 T 14-10-2018 IPR011846 Cyd operon protein YbgE VS_II0189 6e03a81f0976e2c31df4cb5f7c9ee0f2 223 Hamap MF_01572 UPF0397 protein . 42 223 20.832 T 14-10-2018 IPR022914 Protein of unknown function UPF0397 VS_II0189 6e03a81f0976e2c31df4cb5f7c9ee0f2 223 Gene3D G3DSA:1.10.1760.20 39 218 1.1E-17 T 14-10-2018 VS_II0189 6e03a81f0976e2c31df4cb5f7c9ee0f2 223 Pfam PF07155 ECF-type riboflavin transporter, S component 43 212 7.0E-42 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 VS_0941 3adb1a148cea05492711466700b96797 333 Pfam PF11279 Protein of unknown function (DUF3080) 34 330 4.4E-93 T 14-10-2018 IPR021431 Protein of unknown function DUF3080 VS_0525 dfec2664ee6e72652815b4aed94a8a5b 263 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 1.8E-50 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VS_II1067 2216759249af0aa41d93540385195440 254 SUPERFAMILY SSF52540 2 226 3.86E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1067 2216759249af0aa41d93540385195440 254 Pfam PF00005 ABC transporter 18 164 8.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1067 2216759249af0aa41d93540385195440 254 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1067 2216759249af0aa41d93540385195440 254 SMART SM00382 26 213 3.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1067 2216759249af0aa41d93540385195440 254 Gene3D G3DSA:3.40.50.300 1 250 1.2E-64 T 14-10-2018 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 TIGRFAM TIGR00835 agcS: amino acid carrier protein 66 498 1.5E-114 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 Pfam PF01235 Sodium:alanine symporter family 104 507 1.0E-124 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 PRINTS PR00175 Sodium/alanine symporter signature 407 429 8.7E-44 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 PRINTS PR00175 Sodium/alanine symporter signature 241 259 8.7E-44 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 PRINTS PR00175 Sodium/alanine symporter signature 468 488 8.7E-44 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 PRINTS PR00175 Sodium/alanine symporter signature 140 162 8.7E-44 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 PRINTS PR00175 Sodium/alanine symporter signature 359 377 8.7E-44 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_1296 56bb504230e372bc7e0c7e3d5b4f4502 513 PRINTS PR00175 Sodium/alanine symporter signature 269 288 8.7E-44 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VS_0433 3f81d54414da17e6d7b986de57d847ee 245 Pfam PF02167 Cytochrome C1 family 34 244 1.8E-15 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VS_0433 3f81d54414da17e6d7b986de57d847ee 245 SUPERFAMILY SSF46626 17 208 1.48E-46 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_0433 3f81d54414da17e6d7b986de57d847ee 245 Gene3D G3DSA:1.10.760.10 26 210 4.8E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_0847 ee974cfcc42eceb72a5bac516e5f61c2 164 Gene3D G3DSA:2.30.30.40 22 147 9.4E-43 T 14-10-2018 VS_0847 ee974cfcc42eceb72a5bac516e5f61c2 164 SUPERFAMILY SSF50341 14 158 1.15E-41 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VS_0847 ee974cfcc42eceb72a5bac516e5f61c2 164 Gene3D G3DSA:2.40.50.180 39 148 9.4E-43 T 14-10-2018 VS_0847 ee974cfcc42eceb72a5bac516e5f61c2 164 SMART SM00260 16 153 4.6E-50 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_0847 ee974cfcc42eceb72a5bac516e5f61c2 164 Pfam PF01584 CheW-like domain 20 155 2.9E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 Gene3D G3DSA:1.10.3210.10 143 345 1.3E-77 T 14-10-2018 VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 SUPERFAMILY SSF52172 5 137 8.54E-37 T 14-10-2018 IPR011006 CheY-like superfamily VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 Pfam PF01966 HD domain 171 291 6.9E-18 T 14-10-2018 IPR006674 HD domain VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 SUPERFAMILY SSF109604 150 332 1.23E-41 T 14-10-2018 VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 SMART SM00448 9 122 4.2E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 SMART SM00471 164 301 8.0E-11 T 14-10-2018 IPR003607 HD/PDEase domain VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 Pfam PF00072 Response regulator receiver domain 11 120 7.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1316 cc1a1a0eb581228ff6baddfc374981e7 347 Gene3D G3DSA:3.40.50.2300 1 142 6.9E-35 T 14-10-2018 VS_1605 fe355f0febd18ed964ceddf9d86c9705 126 Pfam PF11964 SpoIIAA-like 20 124 3.4E-19 T 14-10-2018 IPR021866 SpoIIAA-like VS_1605 fe355f0febd18ed964ceddf9d86c9705 126 Gene3D G3DSA:3.40.50.10600 1 125 1.7E-44 T 14-10-2018 IPR038396 SpoIIAA-like superfamily VS_1605 fe355f0febd18ed964ceddf9d86c9705 126 SUPERFAMILY SSF52091 1 124 3.57E-37 T 14-10-2018 IPR036513 STAS domain superfamily VS_II1370 4512f1530327f891c75c2f70ad3c67f8 287 Gene3D G3DSA:1.20.1250.20 2 274 6.9E-16 T 14-10-2018 VS_II1370 4512f1530327f891c75c2f70ad3c67f8 287 SUPERFAMILY SSF103473 5 275 1.96E-30 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II1370 4512f1530327f891c75c2f70ad3c67f8 287 Pfam PF07690 Major Facilitator Superfamily 14 239 1.7E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 Gene3D G3DSA:3.40.50.2300 119 230 5.2E-40 T 14-10-2018 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 SUPERFAMILY SSF52794 131 232 1.26E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 243 573 7.1E-137 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 1.9E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 134 222 3.4E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 Gene3D G3DSA:3.40.50.2300 1 103 1.9E-23 T 14-10-2018 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 SUPERFAMILY SSF52794 2 102 5.23E-27 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 Pfam PF02378 Phosphotransferase system, EIIC 256 519 1.0E-15 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VS_II1034 7a97deb30b36822a821ac0f25f4d8fd7 586 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 133 216 3.3E-35 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VS_1621 802490392fd82dc1ff332be00d1082ec 246 Gene3D G3DSA:3.40.50.720 6 246 3.7E-42 T 14-10-2018 VS_1621 802490392fd82dc1ff332be00d1082ec 246 Pfam PF00106 short chain dehydrogenase 8 203 4.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1621 802490392fd82dc1ff332be00d1082ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1621 802490392fd82dc1ff332be00d1082ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1621 802490392fd82dc1ff332be00d1082ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1621 802490392fd82dc1ff332be00d1082ec 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1621 802490392fd82dc1ff332be00d1082ec 246 SUPERFAMILY SSF51735 8 246 3.1E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0597 7a7d3ea430aeb4c1000941f3e1925c6c 153 SUPERFAMILY SSF48695 52 151 2.24E-41 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VS_II0597 7a7d3ea430aeb4c1000941f3e1925c6c 153 Gene3D G3DSA:1.10.1130.10 67 134 2.1E-28 T 14-10-2018 VS_II0597 7a7d3ea430aeb4c1000941f3e1925c6c 153 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 28 148 9.5E-50 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VS_II0597 7a7d3ea430aeb4c1000941f3e1925c6c 153 PIRSF PIRSF006105 1 153 1.8E-48 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VS_2870 000ae273e3d979e90f761433c5866e4d 505 Pfam PF13401 AAA domain 31 154 2.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2870 000ae273e3d979e90f761433c5866e4d 505 SUPERFAMILY SSF52540 17 224 6.44E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2870 000ae273e3d979e90f761433c5866e4d 505 Gene3D G3DSA:3.30.70.1070 405 502 1.3E-23 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_2870 000ae273e3d979e90f761433c5866e4d 505 Gene3D G3DSA:3.40.50.300 8 164 1.2E-6 T 14-10-2018 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 Gene3D G3DSA:3.40.710.10 17 283 9.4E-88 T 14-10-2018 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 5.5E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 5.5E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 5.5E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 375 1.1E-21 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 Gene3D G3DSA:2.60.410.10 285 375 1.4E-26 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 SUPERFAMILY SSF56601 17 285 2.49E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 SUPERFAMILY SSF69189 285 377 1.63E-22 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 SMART SM00936 285 375 5.7E-30 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VS_II0550 bc85c4d3ee61c4018a519884decf2b41 394 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 265 8.5E-85 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VS_1844 dfc95dc28b1e367d30204b20f4cbb50e 211 SUPERFAMILY SSF103088 62 191 1.31E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1844 dfc95dc28b1e367d30204b20f4cbb50e 211 Pfam PF00691 OmpA family 91 186 1.2E-19 T 14-10-2018 IPR006665 OmpA-like domain VS_1844 dfc95dc28b1e367d30204b20f4cbb50e 211 PRINTS PR01021 OMPA domain signature 122 137 1.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1844 dfc95dc28b1e367d30204b20f4cbb50e 211 PRINTS PR01021 OMPA domain signature 92 114 1.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1844 dfc95dc28b1e367d30204b20f4cbb50e 211 PRINTS PR01021 OMPA domain signature 137 153 1.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1844 dfc95dc28b1e367d30204b20f4cbb50e 211 Gene3D G3DSA:3.30.1330.60 67 191 1.3E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 40.982 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 Gene3D G3DSA:2.40.30.160 190 312 2.5E-32 T 14-10-2018 VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.0E-23 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 Pfam PF01571 Aminomethyltransferase folate-binding domain 26 137 2.8E-5 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 Gene3D G3DSA:3.30.70.1630 27 187 1.4E-37 T 14-10-2018 VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 SUPERFAMILY SSF101790 237 321 6.21E-18 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 Gene3D G3DSA:3.30.70.1400 29 115 1.4E-37 T 14-10-2018 VS_2630 384014bcaa4242e62b890cbc0c9100ea 323 SUPERFAMILY SSF103025 9 235 3.92E-51 T 14-10-2018 VS_2412 9798f8e8a1462841387a158ff01e6794 218 Pfam PF00677 Lumazine binding domain 100 184 7.6E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2412 9798f8e8a1462841387a158ff01e6794 218 Pfam PF00677 Lumazine binding domain 3 87 3.7E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2412 9798f8e8a1462841387a158ff01e6794 218 Gene3D G3DSA:2.40.30.20 102 205 1.4E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_2412 9798f8e8a1462841387a158ff01e6794 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 3.0E-66 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2412 9798f8e8a1462841387a158ff01e6794 218 PIRSF PIRSF000498 1 212 3.0E-80 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VS_2412 9798f8e8a1462841387a158ff01e6794 218 Gene3D G3DSA:2.40.30.20 1 89 5.3E-27 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_2412 9798f8e8a1462841387a158ff01e6794 218 SUPERFAMILY SSF63380 93 197 1.62E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_2412 9798f8e8a1462841387a158ff01e6794 218 SUPERFAMILY SSF63380 1 89 7.99E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VS_II1224 1906378fb6d075b7ce7e8061a2615e4f 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 65.825 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein VS_II1224 1906378fb6d075b7ce7e8061a2615e4f 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 4.2E-72 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 VS_0910 be2293b7085ae66b10d0085a406eedba 367 Gene3D G3DSA:3.40.50.2300 10 147 1.6E-33 T 14-10-2018 VS_0910 be2293b7085ae66b10d0085a406eedba 367 SMART SM00448 20 132 1.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0910 be2293b7085ae66b10d0085a406eedba 367 SUPERFAMILY SSF52172 19 136 2.28E-33 T 14-10-2018 IPR011006 CheY-like superfamily VS_0910 be2293b7085ae66b10d0085a406eedba 367 Pfam PF00072 Response regulator receiver domain 22 123 7.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_0910 be2293b7085ae66b10d0085a406eedba 367 Gene3D G3DSA:3.60.40.10 164 349 1.2E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VS_II0873 bbe6cfd7fc27797b368ba85e6c3359a9 574 SMART SM00327 99 274 0.0073 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_II0873 bbe6cfd7fc27797b368ba85e6c3359a9 574 Gene3D G3DSA:3.40.50.410 97 281 2.4E-26 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0873 bbe6cfd7fc27797b368ba85e6c3359a9 574 SUPERFAMILY SSF53300 99 273 2.11E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0873 bbe6cfd7fc27797b368ba85e6c3359a9 574 Pfam PF13519 von Willebrand factor type A domain 102 207 2.6E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_0683 e9ae10e3bb22e0c596deec25d94cd236 403 PIRSF PIRSF005572 21 403 2.0E-53 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VS_0683 e9ae10e3bb22e0c596deec25d94cd236 403 Gene3D G3DSA:3.40.640.10 35 295 3.3E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_0683 e9ae10e3bb22e0c596deec25d94cd236 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 3 403 2.5E-157 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VS_0683 e9ae10e3bb22e0c596deec25d94cd236 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 7.5E-168 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VS_0683 e9ae10e3bb22e0c596deec25d94cd236 403 Pfam PF00266 Aminotransferase class-V 24 392 3.1E-150 T 14-10-2018 IPR000192 Aminotransferase class V domain VS_0683 e9ae10e3bb22e0c596deec25d94cd236 403 Gene3D G3DSA:3.90.1150.10 7 396 3.3E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_0683 e9ae10e3bb22e0c596deec25d94cd236 403 SUPERFAMILY SSF53383 3 400 2.69E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2438 245abf639e27aea1b0519b0b31483d35 404 Pfam PF13614 AAA domain 152 311 2.5E-10 T 14-10-2018 IPR025669 AAA domain VS_2438 245abf639e27aea1b0519b0b31483d35 404 Gene3D G3DSA:3.40.50.300 151 388 2.2E-46 T 14-10-2018 VS_2438 245abf639e27aea1b0519b0b31483d35 404 SUPERFAMILY SSF52540 152 385 2.69E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1480 93eab4f71acbe246faf89c0385ba74b7 244 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 53.815 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VS_1480 93eab4f71acbe246faf89c0385ba74b7 244 Gene3D G3DSA:3.30.1600.10 22 158 1.4E-78 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VS_1480 93eab4f71acbe246faf89c0385ba74b7 244 Gene3D G3DSA:3.40.50.1220 8 225 1.4E-78 T 14-10-2018 VS_1480 93eab4f71acbe246faf89c0385ba74b7 244 Pfam PF02146 Sir2 family 13 186 6.0E-50 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 VS_1480 93eab4f71acbe246faf89c0385ba74b7 244 SUPERFAMILY SSF52467 6 236 4.04E-72 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VS_1465 2b33b4e6cc1845de95fa7d89275ecdc9 78 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 6.6E-16 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VS_1465 2b33b4e6cc1845de95fa7d89275ecdc9 78 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 4.6E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VS_2679 1e173a169a907da1e163aa4e753e9ecb 187 SUPERFAMILY SSF143456 1 187 1.16E-64 T 14-10-2018 VS_2679 1e173a169a907da1e163aa4e753e9ecb 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 38.912 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VS_2679 1e173a169a907da1e163aa4e753e9ecb 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.7E-49 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VS_2679 1e173a169a907da1e163aa4e753e9ecb 187 Gene3D G3DSA:3.40.1740.10 1 187 6.3E-68 T 14-10-2018 VS_2523 49c96705bfbd0ac9feebed82db8485f3 779 Gene3D G3DSA:3.10.20.310 355 429 2.0E-9 T 14-10-2018 VS_2523 49c96705bfbd0ac9feebed82db8485f3 779 SUPERFAMILY SSF52151 43 333 3.14E-57 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_2523 49c96705bfbd0ac9feebed82db8485f3 779 SUPERFAMILY SSF56935 470 705 5.13E-5 T 14-10-2018 VS_2523 49c96705bfbd0ac9feebed82db8485f3 779 Pfam PF01734 Patatin-like phospholipase 49 239 1.1E-29 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VS_2523 49c96705bfbd0ac9feebed82db8485f3 779 Gene3D G3DSA:3.40.1090.10 28 136 5.6E-29 T 14-10-2018 VS_2523 49c96705bfbd0ac9feebed82db8485f3 779 Gene3D G3DSA:3.40.1090.10 144 295 1.7E-18 T 14-10-2018 VS_II0153 4d9985e3633006704c5ddab6bc2fd63c 314 SUPERFAMILY SSF69593 15 284 2.88E-34 T 14-10-2018 VS_II0153 4d9985e3633006704c5ddab6bc2fd63c 314 Pfam PF01553 Acyltransferase 72 226 1.5E-15 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_II0153 4d9985e3633006704c5ddab6bc2fd63c 314 SMART SM00563 85 223 1.5E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_0825 a74dd732fe87f84e4644c85e621c7ebc 266 Pfam PF02108 Flagellar assembly protein FliH 125 252 5.2E-35 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VS_0825 a74dd732fe87f84e4644c85e621c7ebc 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 7.7E-6 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VS_0825 a74dd732fe87f84e4644c85e621c7ebc 266 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 7.7E-6 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VS_0825 a74dd732fe87f84e4644c85e621c7ebc 266 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 7.7E-6 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VS_1210 9e8e65510f87147f6f44d9fbfb80e209 234 PIRSF PIRSF028111 5 234 1.8E-83 T 14-10-2018 IPR016868 Bacteriophage B3, Orf5 VS_1210 9e8e65510f87147f6f44d9fbfb80e209 234 Pfam PF10979 Protein of unknown function (DUF2786) 10 47 7.5E-11 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 VS_1320 473e2acef0e3f0b24ddcfdf03bd12dfe 457 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 19 457 6.0E-98 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VS_1320 473e2acef0e3f0b24ddcfdf03bd12dfe 457 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 33 455 1.9E-108 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VS_1514 13146b671ba0f8d34237e4af3d27898c 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 7.4E-21 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein VS_1514 13146b671ba0f8d34237e4af3d27898c 67 PIRSF PIRSF037225 1 65 8.2E-25 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VS_1741 0f18322f0b67c5b0a18b9fe25a2735f4 151 Gene3D G3DSA:3.30.420.130 1 101 2.1E-11 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VS_1741 0f18322f0b67c5b0a18b9fe25a2735f4 151 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 11 91 9.9E-11 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VS_1741 0f18322f0b67c5b0a18b9fe25a2735f4 151 SUPERFAMILY SSF53146 1 120 9.29E-19 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VS_0175 7295ed891a3712605fcef06d02c28761 70 Gene3D G3DSA:2.40.50.140 2 69 9.9E-29 T 14-10-2018 VS_0175 7295ed891a3712605fcef06d02c28761 70 SMART SM00357 6 70 1.5E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VS_0175 7295ed891a3712605fcef06d02c28761 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_0175 7295ed891a3712605fcef06d02c28761 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_0175 7295ed891a3712605fcef06d02c28761 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_0175 7295ed891a3712605fcef06d02c28761 70 SUPERFAMILY SSF50249 4 69 3.0E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VS_0175 7295ed891a3712605fcef06d02c28761 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site VS_0175 7295ed891a3712605fcef06d02c28761 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 2.4E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VS_0175 7295ed891a3712605fcef06d02c28761 70 PIRSF PIRSF002599 1 70 1.5E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 44.74 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 SUPERFAMILY SSF47807 164 254 9.27E-18 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 Gene3D G3DSA:1.10.150.20 167 255 2.7E-18 T 14-10-2018 VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 SUPERFAMILY SSF88723 4 164 1.86E-38 T 14-10-2018 IPR029060 PIN-like domain superfamily VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 SMART SM00475 3 254 2.5E-55 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 156 5.5E-31 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 Gene3D G3DSA:3.40.50.1010 1 166 2.3E-51 T 14-10-2018 VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 255 1.2E-19 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VS_2394 36d31f8f5bf7c58506af33d476d7b625 257 SMART SM00279 167 202 6.5E-8 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VS_1606 ccb5361da3152f9512600b32bd67ca21 198 SUPERFAMILY SSF53335 3 196 1.78E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1606 ccb5361da3152f9512600b32bd67ca21 198 Gene3D G3DSA:3.40.50.150 30 197 2.1E-19 T 14-10-2018 VS_1606 ccb5361da3152f9512600b32bd67ca21 198 Pfam PF08241 Methyltransferase domain 40 132 1.3E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VS_1818 e350b62299e0f61f3c1438d99263e20c 1068 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 595 722 1.7E-6 T 14-10-2018 VS_1818 e350b62299e0f61f3c1438d99263e20c 1068 SUPERFAMILY SSF49899 594 785 8.48E-15 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VS_1818 e350b62299e0f61f3c1438d99263e20c 1068 Gene3D G3DSA:2.60.120.200 550 780 2.2E-12 T 14-10-2018 VS_0595 6fdd03fae716d27090879aacc3394d94 472 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 276 433 1.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0595 6fdd03fae716d27090879aacc3394d94 472 SMART SM00283 210 471 9.4E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_0595 6fdd03fae716d27090879aacc3394d94 472 Gene3D G3DSA:1.10.287.950 151 472 1.2E-66 T 14-10-2018 VS_0595 6fdd03fae716d27090879aacc3394d94 472 SUPERFAMILY SSF58104 186 472 1.07E-69 T 14-10-2018 VS_II0535 c502f54b4cacaaa4177d615893a88096 382 Gene3D G3DSA:3.40.50.1970 1 180 9.2E-50 T 14-10-2018 VS_II0535 c502f54b4cacaaa4177d615893a88096 382 SUPERFAMILY SSF56796 3 380 1.16E-94 T 14-10-2018 VS_II0535 c502f54b4cacaaa4177d615893a88096 382 Gene3D G3DSA:1.20.1090.10 181 381 1.7E-31 T 14-10-2018 VS_II0535 c502f54b4cacaaa4177d615893a88096 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 353 4.4E-77 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VS_0395 a6b542021ad674ea43f24dc36fbded4e 422 PIRSF PIRSF001434 1 422 7.5E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_0395 a6b542021ad674ea43f24dc36fbded4e 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_0395 a6b542021ad674ea43f24dc36fbded4e 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 2.2E-199 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 VS_0395 a6b542021ad674ea43f24dc36fbded4e 422 Gene3D G3DSA:3.90.1150.10 289 422 1.3E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_0395 a6b542021ad674ea43f24dc36fbded4e 422 Gene3D G3DSA:3.40.640.10 1 285 2.3E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_0395 a6b542021ad674ea43f24dc36fbded4e 422 SUPERFAMILY SSF53383 1 420 5.53E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_0395 a6b542021ad674ea43f24dc36fbded4e 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 4.5E-140 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_1115 88be18cfffd9b0a02b1fafc870e9d8ae 319 SUPERFAMILY SSF74653 227 319 1.84E-14 T 14-10-2018 VS_1115 88be18cfffd9b0a02b1fafc870e9d8ae 319 TIGRFAM TIGR02794 tolA_full: protein TolA 2 318 7.9E-67 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VS_1115 88be18cfffd9b0a02b1fafc870e9d8ae 319 Gene3D G3DSA:3.30.1150.10 218 319 2.1E-25 T 14-10-2018 VS_1115 88be18cfffd9b0a02b1fafc870e9d8ae 319 Pfam PF06519 TolA C-terminal 219 316 1.9E-28 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VS_0296 a118b79508d11e5c8bdf9dc15cecc4f3 73 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 63 2.1E-21 T 14-10-2018 IPR014318 Phage shock protein, PspG VS_0296 a118b79508d11e5c8bdf9dc15cecc4f3 73 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 4.2E-25 T 14-10-2018 IPR014318 Phage shock protein, PspG VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 SUPERFAMILY SSF48179 163 270 2.04E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 Gene3D G3DSA:3.40.50.720 2 164 7.7E-50 T 14-10-2018 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 PIRSF PIRSF000193 3 270 8.0E-76 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 2.5E-30 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 Gene3D G3DSA:1.10.3730.10 165 272 9.1E-35 T 14-10-2018 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 9.5E-25 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 5.5E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.461 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VS_2684 7fb7de252e6dd0bced1e0a8c3599c571 272 SUPERFAMILY SSF51735 4 160 3.33E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_3136 ba849e84f35ae0771171344585354a9e 87 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 6.4E-45 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VS_3136 ba849e84f35ae0771171344585354a9e 87 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-35 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VS_3136 ba849e84f35ae0771171344585354a9e 87 Gene3D G3DSA:1.10.1580.20 1 87 4.6E-42 T 14-10-2018 IPR038134 YihD-like superfamily VS_1044 72208acf052cf3d1ade15dfdee2e4958 355 Pfam PF01343 Peptidase family S49 168 316 4.0E-47 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VS_1044 72208acf052cf3d1ade15dfdee2e4958 355 Gene3D G3DSA:3.40.1750.20 208 272 2.9E-44 T 14-10-2018 VS_1044 72208acf052cf3d1ade15dfdee2e4958 355 Pfam PF08496 Peptidase family S49 N-terminal 4 164 4.5E-55 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VS_1044 72208acf052cf3d1ade15dfdee2e4958 355 SUPERFAMILY SSF52096 105 305 1.9E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_1044 72208acf052cf3d1ade15dfdee2e4958 355 Gene3D G3DSA:3.90.226.10 111 308 2.9E-44 T 14-10-2018 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 1.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 1.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.2E-9 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 338 1.6E-58 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 Pfam PF00460 Flagella basal body rod protein 15 35 2.3E-4 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 SUPERFAMILY SSF64518 169 624 6.02E-25 T 14-10-2018 VS_0810 34a74a0ada9ba796b0077e5a51c241eb 626 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 580 624 1.9E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VS_1906 08f7e119e90748a64c5401a301ac5b2c 133 Pfam PF02657 Fe-S metabolism associated domain 8 127 2.3E-39 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VS_1906 08f7e119e90748a64c5401a301ac5b2c 133 Gene3D G3DSA:3.90.1010.10 1 133 2.6E-44 T 14-10-2018 VS_1906 08f7e119e90748a64c5401a301ac5b2c 133 SUPERFAMILY SSF82649 4 131 5.75E-38 T 14-10-2018 VS_3158 5cffec090ac67cabc135fc723b135483 265 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 30 258 1.3E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 PRINTS PR00123 ATP synthase A subunit signature 195 217 5.4E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 PRINTS PR00123 ATP synthase A subunit signature 243 258 5.4E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 PRINTS PR00123 ATP synthase A subunit signature 96 112 5.4E-15 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 263 15.868 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 SUPERFAMILY SSF81336 88 257 2.88E-50 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 ProSitePatterns PS00449 ATP synthase a subunit signature. 198 207 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 Gene3D G3DSA:1.20.120.220 87 263 5.4E-67 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_3158 5cffec090ac67cabc135fc723b135483 265 Pfam PF00119 ATP synthase A chain 39 257 1.9E-58 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VS_II1226 13b85e58ce04c8322083ed704672d497 445 PIRSF PIRSF006603 1 443 4.1E-87 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1226 13b85e58ce04c8322083ed704672d497 445 Pfam PF01554 MatE 22 182 1.8E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1226 13b85e58ce04c8322083ed704672d497 445 Pfam PF01554 MatE 241 392 1.6E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II1226 13b85e58ce04c8322083ed704672d497 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 404 2.3E-45 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0417 ea8625a40b7225835629dab34a7f043f 172 Pfam PF00293 NUDIX domain 23 145 5.3E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_II0417 ea8625a40b7225835629dab34a7f043f 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VS_II0417 ea8625a40b7225835629dab34a7f043f 172 Gene3D G3DSA:3.90.79.10 12 151 5.9E-25 T 14-10-2018 VS_II0417 ea8625a40b7225835629dab34a7f043f 172 SUPERFAMILY SSF55811 9 142 9.07E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_1483 3aac1765ebcff2a586bb06ee5f071ba8 357 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 126 330 5.5E-80 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VS_1483 3aac1765ebcff2a586bb06ee5f071ba8 357 SUPERFAMILY SSF81342 123 334 3.22E-44 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VS_1483 3aac1765ebcff2a586bb06ee5f071ba8 357 Gene3D G3DSA:1.20.950.20 122 340 8.7E-63 T 14-10-2018 VS_1483 3aac1765ebcff2a586bb06ee5f071ba8 357 Pfam PF01292 Prokaryotic cytochrome b561 129 310 5.2E-25 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VS_3095 3ab402a4f77aec161977e2fc9dada264 69 SUPERFAMILY SSF54285 4 69 1.06E-14 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VS_3095 3ab402a4f77aec161977e2fc9dada264 69 Pfam PF02597 ThiS family 10 69 7.0E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VS_3095 3ab402a4f77aec161977e2fc9dada264 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 6.6E-17 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis VS_3095 3ab402a4f77aec161977e2fc9dada264 69 Gene3D G3DSA:3.10.20.30 4 69 1.4E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VS_II0926 0c30dbd10d355f7d479ad33fe122fc26 345 SUPERFAMILY SSF56235 25 325 2.01E-56 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_II0926 0c30dbd10d355f7d479ad33fe122fc26 345 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 25 250 1.4E-34 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal VS_II0926 0c30dbd10d355f7d479ad33fe122fc26 345 Gene3D G3DSA:3.60.60.10 22 344 9.7E-56 T 14-10-2018 VS_0643 4b70a4df63a200b656e642823928d9ec 142 SUPERFAMILY SSF55961 1 142 1.21E-33 T 14-10-2018 VS_0643 4b70a4df63a200b656e642823928d9ec 142 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.0E-30 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VS_0643 4b70a4df63a200b656e642823928d9ec 142 Gene3D G3DSA:3.30.530.20 2 142 3.2E-37 T 14-10-2018 IPR023393 START-like domain superfamily VS_0969 e648e6513619469b813b9d39d183e2fa 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 1.0E-63 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VS_0969 e648e6513619469b813b9d39d183e2fa 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 1.7E-74 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VS_0526 55f52600ecdaca3456b9b4b7154e5a24 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 262 1.1E-90 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VS_0526 55f52600ecdaca3456b9b4b7154e5a24 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.104 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VS_0526 55f52600ecdaca3456b9b4b7154e5a24 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VS_0526 55f52600ecdaca3456b9b4b7154e5a24 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.8E-83 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VS_3160 9f17cf64b795ced3b7afe719f0d02857 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 213 7.3E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VS_3160 9f17cf64b795ced3b7afe719f0d02857 293 Pfam PF02195 ParB-like nuclease domain 47 130 1.1E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VS_3160 9f17cf64b795ced3b7afe719f0d02857 293 SUPERFAMILY SSF110849 42 174 5.02E-32 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VS_3160 9f17cf64b795ced3b7afe719f0d02857 293 Gene3D G3DSA:1.10.10.2830 117 230 1.5E-33 T 14-10-2018 VS_3160 9f17cf64b795ced3b7afe719f0d02857 293 Gene3D G3DSA:3.90.1530.30 53 116 6.1E-27 T 14-10-2018 VS_3160 9f17cf64b795ced3b7afe719f0d02857 293 SMART SM00470 40 130 6.7E-33 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VS_2658 d408e2547936d0381aef0691804e257e 354 SUPERFAMILY SSF81345 23 347 4.97E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2658 d408e2547936d0381aef0691804e257e 354 Pfam PF01032 FecCD transport family 35 348 1.0E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_2658 d408e2547936d0381aef0691804e257e 354 Gene3D G3DSA:1.10.3470.10 22 353 1.8E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 Gene3D G3DSA:3.40.350.10 9 163 1.1E-27 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 PRINTS PR00599 Methionine aminopeptidase-1 signature 343 355 4.5E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 PRINTS PR00599 Methionine aminopeptidase-1 signature 245 261 4.5E-7 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 Pfam PF01321 Creatinase/Prolidase N-terminal domain 24 165 5.7E-15 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 Pfam PF00557 Metallopeptidase family M24 173 375 2.8E-38 T 14-10-2018 IPR000994 Peptidase M24 VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 SUPERFAMILY SSF53092 3 163 4.71E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 Gene3D G3DSA:3.90.230.10 164 389 5.0E-52 T 14-10-2018 VS_II0055 6eace66eab70f8ed9ed948ead4b9a242 393 SUPERFAMILY SSF55920 165 384 9.03E-58 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VS_2956 54d83e1ee71e7ac2585a5765640b354a 197 Pfam PF04222 Protein of unknown function (DUF416) 8 195 8.8E-76 T 14-10-2018 IPR007338 Protein of unknown function DUF416 VS_2956 54d83e1ee71e7ac2585a5765640b354a 197 Gene3D G3DSA:1.20.1590.10 4 197 1.4E-64 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily VS_1684 7f7e28c2b5a52667343e08a98843a222 188 Pfam PF07209 Protein of unknown function (DUF1415) 12 179 1.6E-66 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 VS_2727 1cfbe461174c6f3034f7c26dae7501fa 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 3.4E-66 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VS_2727 1cfbe461174c6f3034f7c26dae7501fa 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 8.8E-131 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VS_1046 dde09bddab6ca2c327e3e51cb73fb5ef 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 1.9E-187 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 VS_1046 dde09bddab6ca2c327e3e51cb73fb5ef 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.193 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 VS_II1331 a23c2337e4da2c8449e81fc62858c41e 246 PRINTS PR00502 NUDIX hydrolase family signature 132 147 2.1E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_II1331 a23c2337e4da2c8449e81fc62858c41e 246 PRINTS PR00502 NUDIX hydrolase family signature 118 132 2.1E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VS_II1331 a23c2337e4da2c8449e81fc62858c41e 246 SUPERFAMILY SSF55811 53 225 1.26E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_II1331 a23c2337e4da2c8449e81fc62858c41e 246 Gene3D G3DSA:3.40.630.30 1 79 4.8E-14 T 14-10-2018 VS_II1331 a23c2337e4da2c8449e81fc62858c41e 246 Pfam PF00293 NUDIX domain 92 211 8.3E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_II1331 a23c2337e4da2c8449e81fc62858c41e 246 Gene3D G3DSA:3.90.79.10 94 221 2.1E-30 T 14-10-2018 VS_1985 3240e26bcf8a7a32bfc312b961ec4a86 188 Gene3D G3DSA:1.10.340.30 8 188 2.2E-77 T 14-10-2018 VS_1985 3240e26bcf8a7a32bfc312b961ec4a86 188 Pfam PF03352 Methyladenine glycosylase 12 186 1.1E-73 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VS_1985 3240e26bcf8a7a32bfc312b961ec4a86 188 SUPERFAMILY SSF48150 9 187 1.1E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VS_2323 01efbec2b8506c9e4ae3de77431a78fc 415 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 25 399 2.6E-130 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 VS_1443 f72220b8c6c31ac42f87359c659c10f6 158 Pfam PF13274 Protein of unknown function (DUF4065) 26 127 1.2E-15 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 VS_1615 f006a4e2f535fcd2396a43a013d645fe 86 Pfam PF11730 Protein of unknown function (DUF3297) 13 83 7.9E-35 T 14-10-2018 IPR021724 Protein of unknown function DUF3297 VS_II0709 38f889d5d0cfc08483f366ebce3bcf57 291 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 27 283 3.5E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VS_II0709 38f889d5d0cfc08483f366ebce3bcf57 291 SUPERFAMILY SSF56219 21 290 2.36E-38 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_II0709 38f889d5d0cfc08483f366ebce3bcf57 291 Gene3D G3DSA:3.60.10.10 20 291 1.6E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_II1324 aae1a86ac82dedd9ad0edda5c4d843e1 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 479 2.8E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II1324 aae1a86ac82dedd9ad0edda5c4d843e1 558 SUPERFAMILY SSF53850 52 550 1.7E-137 T 14-10-2018 VS_II1324 aae1a86ac82dedd9ad0edda5c4d843e1 558 PIRSF PIRSF002741 18 558 4.9E-112 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_II1324 aae1a86ac82dedd9ad0edda5c4d843e1 558 Gene3D G3DSA:3.90.76.10 88 211 3.6E-176 T 14-10-2018 VS_II1324 aae1a86ac82dedd9ad0edda5c4d843e1 558 Gene3D G3DSA:3.40.190.10 58 540 3.6E-176 T 14-10-2018 VS_II1324 aae1a86ac82dedd9ad0edda5c4d843e1 558 Gene3D G3DSA:3.10.105.10 313 528 3.6E-176 T 14-10-2018 VS_0955 abbfc0808c5358823bd00752ab8374de 372 SUPERFAMILY SSF51735 1 147 1.03E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0955 abbfc0808c5358823bd00752ab8374de 372 SUPERFAMILY SSF55347 134 355 4.76E-79 T 14-10-2018 VS_0955 abbfc0808c5358823bd00752ab8374de 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 367 2.0E-187 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0955 abbfc0808c5358823bd00752ab8374de 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_0955 abbfc0808c5358823bd00752ab8374de 372 Gene3D G3DSA:3.40.50.720 3 357 2.7E-144 T 14-10-2018 VS_0955 abbfc0808c5358823bd00752ab8374de 372 PIRSF PIRSF000148 1 372 7.0E-67 T 14-10-2018 VS_0955 abbfc0808c5358823bd00752ab8374de 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 2.3E-21 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VS_0955 abbfc0808c5358823bd00752ab8374de 372 Gene3D G3DSA:3.30.360.10 135 351 2.7E-144 T 14-10-2018 VS_0955 abbfc0808c5358823bd00752ab8374de 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 1.1E-56 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VS_0955 abbfc0808c5358823bd00752ab8374de 372 SMART SM00859 2 122 5.9E-24 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VS_0955 abbfc0808c5358823bd00752ab8374de 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 31.907 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VS_2776 858b346671468a2792f38deff6caa201 209 SUPERFAMILY SSF55068 3 207 4.58E-78 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_2776 858b346671468a2792f38deff6caa201 209 Gene3D G3DSA:3.30.1060.10 3 209 1.2E-86 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_2776 858b346671468a2792f38deff6caa201 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 9.4E-65 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_2776 858b346671468a2792f38deff6caa201 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 37.157 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_2776 858b346671468a2792f38deff6caa201 209 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 2.6E-67 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VS_0839 e9f51bffe80a792c1ea12f50fc90db07 295 PIRSF PIRSF003092 6 287 3.3E-85 T 14-10-2018 IPR025501 ATP binding protein MinD VS_0839 e9f51bffe80a792c1ea12f50fc90db07 295 SUPERFAMILY SSF52540 22 283 5.18E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0839 e9f51bffe80a792c1ea12f50fc90db07 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 4.4E-22 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VS_0839 e9f51bffe80a792c1ea12f50fc90db07 295 Gene3D G3DSA:3.40.50.300 22 263 6.1E-58 T 14-10-2018 VS_II1529 2cbc7d0748e84ad84043ace0b2ea3cab 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_II1529 2cbc7d0748e84ad84043ace0b2ea3cab 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 267 4.8E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VS_II1529 2cbc7d0748e84ad84043ace0b2ea3cab 310 SUPERFAMILY SSF52540 6 254 2.6E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1529 2cbc7d0748e84ad84043ace0b2ea3cab 310 Pfam PF00005 ABC transporter 30 184 9.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1529 2cbc7d0748e84ad84043ace0b2ea3cab 310 Gene3D G3DSA:3.40.50.300 4 309 1.7E-80 T 14-10-2018 VS_II1529 2cbc7d0748e84ad84043ace0b2ea3cab 310 SMART SM00382 39 233 3.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2494 3ff8f5cc801dd378862f8edabd14cee1 348 Pfam PF13609 Gram-negative porin 9 317 1.3E-29 T 14-10-2018 VS_2494 3ff8f5cc801dd378862f8edabd14cee1 348 Gene3D G3DSA:2.40.160.10 22 348 7.2E-62 T 14-10-2018 IPR023614 Porin domain superfamily VS_2494 3ff8f5cc801dd378862f8edabd14cee1 348 SUPERFAMILY SSF56935 23 348 5.5E-53 T 14-10-2018 VS_1817 59c0de63af84983e025a0f5dd9261a0e 1071 SUPERFAMILY SSF55486 222 373 2.26E-5 T 14-10-2018 VS_1817 59c0de63af84983e025a0f5dd9261a0e 1071 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 587 696 1.6E-6 T 14-10-2018 VS_1817 59c0de63af84983e025a0f5dd9261a0e 1071 Gene3D G3DSA:2.60.120.200 558 780 3.2E-9 T 14-10-2018 VS_1817 59c0de63af84983e025a0f5dd9261a0e 1071 SUPERFAMILY SSF49899 585 782 2.26E-13 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VS_1887 a25e537eb1d1f83318c2dbee9b4931dc 348 Pfam PF14281 PD-(D/E)XK nuclease superfamily 12 153 2.6E-5 T 14-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 VS_2128 3f51285779d363246e04b0e390c64b4c 199 Pfam PF01810 LysE type translocator 15 196 2.0E-16 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_3005 3101e771245b8fbd5f55241ebc58a488 294 PIRSF PIRSF028177 29 294 3.2E-70 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VS_3005 3101e771245b8fbd5f55241ebc58a488 294 Gene3D G3DSA:3.40.50.150 37 273 3.0E-20 T 14-10-2018 VS_3005 3101e771245b8fbd5f55241ebc58a488 294 Pfam PF04072 Leucine carboxyl methyltransferase 88 153 1.6E-7 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VS_3005 3101e771245b8fbd5f55241ebc58a488 294 SUPERFAMILY SSF53335 42 274 2.08E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II0416 4b90090f6813761fa2083c475b6e74f3 84 Pfam PF03891 Domain of unknown function (DUF333) 32 76 2.0E-18 T 14-10-2018 IPR005590 Protein of unknown function DUF333 VS_II0672 6c8f28ba00451bf1eaf103d4b420e975 198 Pfam PF13778 Domain of unknown function (DUF4174) 82 188 6.3E-25 T 14-10-2018 IPR025232 Domain of unknown function DUF4174 VS_2116 e011a57a0364fcaf677d2672951ccbb9 717 Gene3D G3DSA:2.170.130.10 31 156 9.0E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VS_2116 e011a57a0364fcaf677d2672951ccbb9 717 Gene3D G3DSA:2.40.170.20 172 717 1.7E-41 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VS_2116 e011a57a0364fcaf677d2672951ccbb9 717 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 716 4.3E-78 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VS_2116 e011a57a0364fcaf677d2672951ccbb9 717 Pfam PF00593 TonB dependent receptor 242 716 6.8E-26 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VS_2116 e011a57a0364fcaf677d2672951ccbb9 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 2.2E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VS_2116 e011a57a0364fcaf677d2672951ccbb9 717 SUPERFAMILY SSF56935 25 717 8.06E-85 T 14-10-2018 VS_1743 2cfc9fd585c2dd0d0f85bdca3c2e818c 603 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 131 548 1.4E-54 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VS_1743 2cfc9fd585c2dd0d0f85bdca3c2e818c 603 Gene3D G3DSA:3.90.1150.10 415 555 3.6E-21 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1743 2cfc9fd585c2dd0d0f85bdca3c2e818c 603 Gene3D G3DSA:3.40.640.10 124 412 7.0E-42 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1743 2cfc9fd585c2dd0d0f85bdca3c2e818c 603 SUPERFAMILY SSF53383 136 554 2.66E-50 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II1424 c4e0e01713ddfdd5aea8dc02d695e6e9 128 SUPERFAMILY SSF161084 2 124 1.83E-27 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VS_II1424 c4e0e01713ddfdd5aea8dc02d695e6e9 128 Pfam PF01124 MAPEG family 3 119 8.4E-25 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VS_II1424 c4e0e01713ddfdd5aea8dc02d695e6e9 128 Gene3D G3DSA:1.20.120.550 1 126 2.5E-23 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VS_0353 e94c7d5d58229ccfcb1c0abd51aa8de2 158 Gene3D G3DSA:3.40.50.620 3 155 7.2E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_0353 e94c7d5d58229ccfcb1c0abd51aa8de2 158 SUPERFAMILY SSF52402 14 157 2.93E-35 T 14-10-2018 VS_0353 e94c7d5d58229ccfcb1c0abd51aa8de2 158 PRINTS PR01438 Universal stress protein signature 15 33 6.1E-12 T 14-10-2018 IPR006015 Universal stress protein A VS_0353 e94c7d5d58229ccfcb1c0abd51aa8de2 158 PRINTS PR01438 Universal stress protein signature 133 155 6.1E-12 T 14-10-2018 IPR006015 Universal stress protein A VS_0353 e94c7d5d58229ccfcb1c0abd51aa8de2 158 PRINTS PR01438 Universal stress protein signature 115 127 6.1E-12 T 14-10-2018 IPR006015 Universal stress protein A VS_0353 e94c7d5d58229ccfcb1c0abd51aa8de2 158 Pfam PF00582 Universal stress protein family 14 155 7.1E-32 T 14-10-2018 IPR006016 UspA VS_0353 e94c7d5d58229ccfcb1c0abd51aa8de2 158 PIRSF PIRSF006276 13 158 2.0E-19 T 14-10-2018 IPR006015 Universal stress protein A VS_2767 a042ae3676c33f558e2e8712d7da6233 330 Gene3D G3DSA:3.40.190.10 26 300 7.3E-119 T 14-10-2018 VS_2767 a042ae3676c33f558e2e8712d7da6233 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 296 1.0E-22 T 14-10-2018 VS_2767 a042ae3676c33f558e2e8712d7da6233 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 3.1E-143 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 VS_2767 a042ae3676c33f558e2e8712d7da6233 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 18 329 4.6E-147 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 VS_2767 a042ae3676c33f558e2e8712d7da6233 330 Gene3D G3DSA:3.40.190.10 126 325 7.3E-119 T 14-10-2018 VS_2767 a042ae3676c33f558e2e8712d7da6233 330 SUPERFAMILY SSF53850 24 325 1.52E-68 T 14-10-2018 VS_1041 6c97816f89554bd8f0487221f75b87e7 494 Gene3D G3DSA:3.30.70.270 28 152 2.7E-6 T 14-10-2018 VS_1041 6c97816f89554bd8f0487221f75b87e7 494 Gene3D G3DSA:2.30.40.20 30 80 2.7E-6 T 14-10-2018 VS_1041 6c97816f89554bd8f0487221f75b87e7 494 SUPERFAMILY SSF56672 28 237 2.22E-29 T 14-10-2018 VS_1041 6c97816f89554bd8f0487221f75b87e7 494 Pfam PF00817 impB/mucB/samB family 29 155 1.3E-8 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VS_II1247 ba93f45815a1d41dbcf358681f9748c7 132 Pfam PF11286 Protein of unknown function (DUF3087) 1 131 3.4E-46 T 14-10-2018 IPR021438 Protein of unknown function DUF3087 VS_II1017 dc75c888c2a4dfd70686fb6b6d37894f 425 SUPERFAMILY SSF82171 102 246 7.65E-9 T 14-10-2018 VS_2553 5cdceb0bc36ea79740f638d0c6979769 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.637 T 14-10-2018 IPR009777 Cell division protein ZapD VS_2553 5cdceb0bc36ea79740f638d0c6979769 246 SUPERFAMILY SSF160950 3 245 6.93E-94 T 14-10-2018 IPR036268 ZapD domain superfamily VS_2553 5cdceb0bc36ea79740f638d0c6979769 246 Pfam PF07072 Cell division protein 18 224 1.2E-75 T 14-10-2018 IPR009777 Cell division protein ZapD VS_2553 5cdceb0bc36ea79740f638d0c6979769 246 Gene3D G3DSA:2.60.440.10 6 245 5.9E-86 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal VS_2553 5cdceb0bc36ea79740f638d0c6979769 246 Gene3D G3DSA:1.10.3900.10 12 178 5.9E-86 T 14-10-2018 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 9.3E-39 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 Gene3D G3DSA:3.30.300.30 152 247 9.1E-10 T 14-10-2018 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 54 578 7.6E-73 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 8.9E-55 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 1.1E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 1.1E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 1.1E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 1.1E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 1.1E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VS_0823 d4ef222f8de623d1c62486e7c8bb60ef 580 PIRSF PIRSF004862 29 580 2.1E-158 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VS_II0530 8deb07344025532a11b272255d139b95 314 Gene3D G3DSA:1.10.4080.10 2 311 1.5E-27 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily VS_II0530 8deb07344025532a11b272255d139b95 314 SUPERFAMILY SSF101478 2 303 9.81E-37 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily VS_II0530 8deb07344025532a11b272255d139b95 314 Pfam PF03747 ADP-ribosylglycohydrolase 11 287 5.3E-50 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 VS_II0729 991e16ff3b9bbb3e4634465dd4d00c42 413 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 345 3.2E-23 T 14-10-2018 IPR000160 GGDEF domain VS_II0729 991e16ff3b9bbb3e4634465dd4d00c42 413 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 348 8.2E-22 T 14-10-2018 IPR000160 GGDEF domain VS_II0729 991e16ff3b9bbb3e4634465dd4d00c42 413 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 408 9.6E-6 T 14-10-2018 IPR000160 GGDEF domain VS_II0729 991e16ff3b9bbb3e4634465dd4d00c42 413 SMART SM00267 227 412 4.1E-29 T 14-10-2018 IPR000160 GGDEF domain VS_II0729 991e16ff3b9bbb3e4634465dd4d00c42 413 SUPERFAMILY SSF55073 243 411 1.88E-31 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0729 991e16ff3b9bbb3e4634465dd4d00c42 413 Gene3D G3DSA:3.30.70.270 232 412 1.0E-40 T 14-10-2018 VS_II0445 e8a10e100c9b1bcdcecf012b250425fc 382 Gene3D G3DSA:3.40.50.1970 2 183 1.2E-57 T 14-10-2018 VS_II0445 e8a10e100c9b1bcdcecf012b250425fc 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VS_II0445 e8a10e100c9b1bcdcecf012b250425fc 382 SUPERFAMILY SSF56796 4 381 2.22E-135 T 14-10-2018 VS_II0445 e8a10e100c9b1bcdcecf012b250425fc 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VS_II0445 e8a10e100c9b1bcdcecf012b250425fc 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 1.4E-126 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VS_II0445 e8a10e100c9b1bcdcecf012b250425fc 382 Gene3D G3DSA:1.20.1090.10 185 382 2.7E-76 T 14-10-2018 VS_1649 a1933e00bca6693563257ede5b58851d 355 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 156 169 6.0E-10 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VS_1649 a1933e00bca6693563257ede5b58851d 355 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 8 24 6.0E-10 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VS_1649 a1933e00bca6693563257ede5b58851d 355 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 113 127 6.0E-10 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VS_1649 a1933e00bca6693563257ede5b58851d 355 Pfam PF00145 C-5 cytosine-specific DNA methylase 10 340 1.5E-51 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VS_1649 a1933e00bca6693563257ede5b58851d 355 Gene3D G3DSA:3.90.120.10 152 328 4.5E-70 T 14-10-2018 VS_1649 a1933e00bca6693563257ede5b58851d 355 Gene3D G3DSA:3.40.50.150 10 332 4.5E-70 T 14-10-2018 VS_1649 a1933e00bca6693563257ede5b58851d 355 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 321 339 - T 14-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 VS_1649 a1933e00bca6693563257ede5b58851d 355 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 10 337 2.7E-37 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VS_1649 a1933e00bca6693563257ede5b58851d 355 SUPERFAMILY SSF53335 7 340 1.25E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0533 fe7e018bf988fc40282a3f6ad77deacc 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.563 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0533 fe7e018bf988fc40282a3f6ad77deacc 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 3.2E-31 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0533 fe7e018bf988fc40282a3f6ad77deacc 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0533 fe7e018bf988fc40282a3f6ad77deacc 86 SUPERFAMILY SSF46992 3 86 4.58E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0533 fe7e018bf988fc40282a3f6ad77deacc 86 Pfam PF01649 Ribosomal protein S20 2 84 2.3E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0533 fe7e018bf988fc40282a3f6ad77deacc 86 Gene3D G3DSA:1.20.58.110 1 86 3.1E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0399 3e66ca2a531ffa27469a217c3162a658 147 Gene3D G3DSA:1.10.10.410 91 147 2.6E-17 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VS_0399 3e66ca2a531ffa27469a217c3162a658 147 Pfam PF09424 Yqey-like protein 5 146 8.1E-55 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VS_0399 3e66ca2a531ffa27469a217c3162a658 147 SUPERFAMILY SSF89095 1 146 1.99E-41 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VS_0399 3e66ca2a531ffa27469a217c3162a658 147 Gene3D G3DSA:1.10.1510.10 1 90 1.3E-27 T 14-10-2018 VS_3024 ce7786932b3866dff6260c1165a1bf44 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 1.1E-17 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 VS_II1193 04e51a094009bb81ea524c5adbd416d4 175 Pfam PF16105 Domain of unknown function (DUF4823) 33 173 2.7E-56 T 14-10-2018 IPR032248 Protein of unknown function DUF4823 VS_II0479 05ed3bd317c81bb6429097be6509dff1 215 Pfam PF16964 Putative tight adherence pilin protein F 24 199 1.4E-23 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F VS_0428 d6f5f2a3aff6f2763b30ca0a8c74380b 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.046 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VS_0428 d6f5f2a3aff6f2763b30ca0a8c74380b 367 Gene3D G3DSA:3.40.50.300 5 192 1.6E-21 T 14-10-2018 VS_0428 d6f5f2a3aff6f2763b30ca0a8c74380b 367 Pfam PF03969 AFG1-like ATPase 2 364 7.1E-154 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VS_0428 d6f5f2a3aff6f2763b30ca0a8c74380b 367 SUPERFAMILY SSF52540 62 198 7.11E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1940 d1bfb63c545ab712e70dff44759f75f0 377 Gene3D G3DSA:1.10.620.20 2 341 1.2E-143 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VS_1940 d1bfb63c545ab712e70dff44759f75f0 377 SUPERFAMILY SSF47240 3 341 6.67E-112 T 14-10-2018 IPR009078 Ferritin-like superfamily VS_1940 d1bfb63c545ab712e70dff44759f75f0 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_1940 d1bfb63c545ab712e70dff44759f75f0 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.1E-48 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VS_II1090 97a1a3aa546cb8440cbd99ee630b8e26 302 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 37 294 2.9E-99 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VS_II1090 97a1a3aa546cb8440cbd99ee630b8e26 302 SUPERFAMILY SSF53613 33 295 1.5E-83 T 14-10-2018 IPR029056 Ribokinase-like VS_II1090 97a1a3aa546cb8440cbd99ee630b8e26 302 Gene3D G3DSA:3.40.1190.20 16 300 2.0E-103 T 14-10-2018 IPR029056 Ribokinase-like VS_II1090 97a1a3aa546cb8440cbd99ee630b8e26 302 Pfam PF08543 Phosphomethylpyrimidine kinase 44 292 9.4E-94 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VS_II1071 84b5890c13f5ee899c6360e5b8053f24 321 Pfam PF01497 Periplasmic binding protein 61 297 2.5E-28 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_II1071 84b5890c13f5ee899c6360e5b8053f24 321 Gene3D G3DSA:3.40.50.1980 45 300 3.7E-84 T 14-10-2018 VS_II1071 84b5890c13f5ee899c6360e5b8053f24 321 SUPERFAMILY SSF53807 37 313 6.67E-63 T 14-10-2018 VS_II1071 84b5890c13f5ee899c6360e5b8053f24 321 Gene3D G3DSA:3.40.50.1980 188 294 3.7E-84 T 14-10-2018 VS_1004 6975124a4b22984ff1d76afc981d9c2a 206 Pfam PF02810 SEC-C motif 186 204 5.3E-9 T 14-10-2018 IPR004027 SEC-C motif VS_1004 6975124a4b22984ff1d76afc981d9c2a 206 SUPERFAMILY SSF103642 184 204 9.81E-7 T 14-10-2018 VS_1004 6975124a4b22984ff1d76afc981d9c2a 206 SUPERFAMILY SSF101327 15 143 5.75E-5 T 14-10-2018 IPR036255 YgfB-like superfamily VS_1004 6975124a4b22984ff1d76afc981d9c2a 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 161 2.2E-7 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VS_1004 6975124a4b22984ff1d76afc981d9c2a 206 Gene3D G3DSA:3.10.450.50 160 205 3.7E-8 T 14-10-2018 VS_II0368 3cbdeacc407bc0b4e27c7bd448c356f1 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 1.3E-46 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0368 3cbdeacc407bc0b4e27c7bd448c356f1 294 Gene3D G3DSA:1.10.287.70 1 78 9.4E-17 T 14-10-2018 VS_II0368 3cbdeacc407bc0b4e27c7bd448c356f1 294 Gene3D G3DSA:1.20.120.80 79 294 1.3E-60 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0368 3cbdeacc407bc0b4e27c7bd448c356f1 294 SUPERFAMILY SSF81452 4 294 1.7E-75 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0394 f7e8b5bb481bdacc0308d07e6b32e9b4 132 Gene3D G3DSA:2.20.25.10 1 34 1.0E-19 T 14-10-2018 VS_II0394 f7e8b5bb481bdacc0308d07e6b32e9b4 132 Pfam PF02566 OsmC-like protein 29 127 2.7E-17 T 14-10-2018 IPR003718 OsmC/Ohr family VS_II0394 f7e8b5bb481bdacc0308d07e6b32e9b4 132 Gene3D G3DSA:3.30.300.20 35 132 1.4E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_II0394 f7e8b5bb481bdacc0308d07e6b32e9b4 132 SUPERFAMILY SSF82784 1 131 2.88E-40 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VS_II0222 1681384b21651c54f2340bf12606adb5 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 4.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0222 1681384b21651c54f2340bf12606adb5 296 SUPERFAMILY SSF161098 10 296 9.42E-69 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0222 1681384b21651c54f2340bf12606adb5 296 Gene3D G3DSA:1.10.3720.10 1 283 3.4E-74 T 14-10-2018 IPR035906 MetI-like superfamily VS_1616 7ac93cc3fa5e3af1aad1e146f4504fca 163 Gene3D G3DSA:3.40.630.30 19 146 4.6E-13 T 14-10-2018 VS_1616 7ac93cc3fa5e3af1aad1e146f4504fca 163 SUPERFAMILY SSF55729 15 148 1.89E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1616 7ac93cc3fa5e3af1aad1e146f4504fca 163 Pfam PF13508 Acetyltransferase (GNAT) domain 56 143 5.6E-8 T 14-10-2018 IPR000182 GNAT domain VS_II0262 7a70f2fdb9f1cfbc997388398e13e2ae 130 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 85 98 - T 14-10-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site VS_II0262 7a70f2fdb9f1cfbc997388398e13e2ae 130 SUPERFAMILY SSF54403 47 118 3.83E-16 T 14-10-2018 VS_II0262 7a70f2fdb9f1cfbc997388398e13e2ae 130 Gene3D G3DSA:3.10.450.10 43 126 1.6E-8 T 14-10-2018 VS_II0262 7a70f2fdb9f1cfbc997388398e13e2ae 130 Pfam PF00031 Cystatin domain 57 114 4.8E-8 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 VS_II0760 1e5cb6c49915e9acd3208da8a6a0ba32 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 5.3E-97 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_II0760 1e5cb6c49915e9acd3208da8a6a0ba32 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 50.847 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_II0760 1e5cb6c49915e9acd3208da8a6a0ba32 399 Gene3D G3DSA:3.40.50.720 1 397 3.6E-162 T 14-10-2018 VS_II0760 1e5cb6c49915e9acd3208da8a6a0ba32 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 1.7E-33 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_II0760 1e5cb6c49915e9acd3208da8a6a0ba32 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 387 8.0E-23 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_II0760 1e5cb6c49915e9acd3208da8a6a0ba32 399 SUPERFAMILY SSF51735 42 148 5.48E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0874 d9085ed536f8ad5a117b60a0f41b9591 355 Gene3D G3DSA:3.40.50.410 100 301 1.1E-50 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0874 d9085ed536f8ad5a117b60a0f41b9591 355 SUPERFAMILY SSF53300 98 296 3.56E-34 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0874 d9085ed536f8ad5a117b60a0f41b9591 355 Pfam PF00092 von Willebrand factor type A domain 102 294 9.5E-24 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_II0874 d9085ed536f8ad5a117b60a0f41b9591 355 SMART SM00327 100 294 8.9E-22 T 14-10-2018 IPR002035 von Willebrand factor, type A VS_2004 75dab3399baab4161458949862dea832 393 Gene3D G3DSA:1.10.3820.10 15 194 1.2E-37 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VS_2004 75dab3399baab4161458949862dea832 393 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 393 3.0E-182 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VS_2004 75dab3399baab4161458949862dea832 393 SUPERFAMILY SSF48695 12 186 3.15E-60 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VS_2004 75dab3399baab4161458949862dea832 393 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 6.2E-73 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VS_2004 75dab3399baab4161458949862dea832 393 PIRSF PIRSF000014 1 393 8.1E-160 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VS_1427 7954756060abbea3cfdd9c8e22267cfb 569 Pfam PF11949 Protein of unknown function (DUF3466) 5 122 2.8E-7 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VS_1427 7954756060abbea3cfdd9c8e22267cfb 569 Pfam PF11949 Protein of unknown function (DUF3466) 226 567 3.5E-60 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VS_1427 7954756060abbea3cfdd9c8e22267cfb 569 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 548 568 4.5E-5 T 14-10-2018 IPR020008 GlyGly-CTERM domain VS_0845 fbdb4a7f8422a9b57e9a4b1e9149eaee 260 Pfam PF13614 AAA domain 4 177 1.5E-51 T 14-10-2018 IPR025669 AAA domain VS_0845 fbdb4a7f8422a9b57e9a4b1e9149eaee 260 Gene3D G3DSA:3.40.50.300 1 255 1.0E-67 T 14-10-2018 VS_0845 fbdb4a7f8422a9b57e9a4b1e9149eaee 260 SUPERFAMILY SSF52540 1 253 2.91E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0845 fbdb4a7f8422a9b57e9a4b1e9149eaee 260 PIRSF PIRSF009320 92 240 1.7E-8 T 14-10-2018 VS_0845 fbdb4a7f8422a9b57e9a4b1e9149eaee 260 PIRSF PIRSF009320 1 63 1.9E-13 T 14-10-2018 VS_1934 916629cb94303486122b833447dc0602 114 SMART SM00450 22 114 1.3E-19 T 14-10-2018 IPR001763 Rhodanese-like domain VS_1934 916629cb94303486122b833447dc0602 114 Gene3D G3DSA:3.40.250.10 23 114 7.7E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_1934 916629cb94303486122b833447dc0602 114 Pfam PF00581 Rhodanese-like domain 30 103 4.2E-15 T 14-10-2018 IPR001763 Rhodanese-like domain VS_1934 916629cb94303486122b833447dc0602 114 SUPERFAMILY SSF52821 6 112 6.81E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VS_1398 cd83ad63ce09c53b8c5b4289242c27f6 115 Pfam PF04358 DsrC like protein 9 115 2.5E-43 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VS_1398 cd83ad63ce09c53b8c5b4289242c27f6 115 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 9 115 7.3E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VS_1398 cd83ad63ce09c53b8c5b4289242c27f6 115 SUPERFAMILY SSF69721 6 115 4.32E-41 T 14-10-2018 IPR025526 DsrC-like domain superfamily VS_1398 cd83ad63ce09c53b8c5b4289242c27f6 115 Gene3D G3DSA:3.30.1420.10 6 44 6.5E-13 T 14-10-2018 VS_1398 cd83ad63ce09c53b8c5b4289242c27f6 115 PIRSF PIRSF006223 8 115 2.2E-40 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VS_1398 cd83ad63ce09c53b8c5b4289242c27f6 115 Gene3D G3DSA:1.10.10.370 45 115 3.4E-30 T 14-10-2018 VS_1580 4841ea9e6836deba8c50af3905f247fc 171 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 64 171 5.5E-48 T 14-10-2018 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family VS_1580 4841ea9e6836deba8c50af3905f247fc 171 Pfam PF02810 SEC-C motif 154 171 1.3E-8 T 14-10-2018 IPR004027 SEC-C motif VS_1580 4841ea9e6836deba8c50af3905f247fc 171 SUPERFAMILY SSF103642 152 170 6.87E-7 T 14-10-2018 VS_1580 4841ea9e6836deba8c50af3905f247fc 171 Gene3D G3DSA:3.10.450.50 81 171 5.6E-10 T 14-10-2018 VS_0559 7d577e3017b723eedd47f30f446af4fb 242 Pfam PF13525 Outer membrane lipoprotein 26 232 1.8E-78 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VS_0559 7d577e3017b723eedd47f30f446af4fb 242 SUPERFAMILY SSF48452 30 119 1.34E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0559 7d577e3017b723eedd47f30f446af4fb 242 Gene3D G3DSA:1.25.40.10 28 240 3.5E-53 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0559 7d577e3017b723eedd47f30f446af4fb 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 4 239 8.1E-77 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VS_0559 7d577e3017b723eedd47f30f446af4fb 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 36.277 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VS_1382 547d7573a245396c04b19ea43d874fe5 443 Pfam PF10117 McrBC 5-methylcytosine restriction system component 63 393 2.9E-98 T 14-10-2018 IPR019292 5-methylcytosine restriction system component VS_II0094 6b13ab5e6b2b4a35dd1968c714c2b333 334 SUPERFAMILY SSF103481 75 174 2.22E-13 T 14-10-2018 VS_II0094 6b13ab5e6b2b4a35dd1968c714c2b333 334 SUPERFAMILY SSF103481 222 318 2.22E-13 T 14-10-2018 VS_II0094 6b13ab5e6b2b4a35dd1968c714c2b333 334 Pfam PF00892 EamA-like transporter family 45 172 1.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0094 6b13ab5e6b2b4a35dd1968c714c2b333 334 Pfam PF00892 EamA-like transporter family 185 317 2.0E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0235 111718a5ebfbc5cb933be721ddd5e728 220 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 11 209 7.0E-31 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VS_II0235 111718a5ebfbc5cb933be721ddd5e728 220 Pfam PF01914 MarC family integral membrane protein 12 212 1.3E-42 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VS_2751 5294bf31e37b4522dc675b91b4b18f80 321 Pfam PF01699 Sodium/calcium exchanger protein 175 315 1.7E-26 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VS_2751 5294bf31e37b4522dc675b91b4b18f80 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 7.8E-28 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VS_2751 5294bf31e37b4522dc675b91b4b18f80 321 Gene3D G3DSA:1.20.58.1130 8 206 6.4E-86 T 14-10-2018 VS_2751 5294bf31e37b4522dc675b91b4b18f80 321 Gene3D G3DSA:1.20.1420.30 35 308 6.4E-86 T 14-10-2018 VS_2751 5294bf31e37b4522dc675b91b4b18f80 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 311 2.7E-81 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 VS_1053 b0839852940ed210061421bc19c3d2be 513 Pfam PF11840 Protein of unknown function (DUF3360) 10 513 6.2E-265 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 VS_1318 89ced10a74fd2d1557f327ef9b71dfd3 1130 Pfam PF14331 ImcF-related N-terminal domain 169 422 2.5E-56 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain VS_1318 89ced10a74fd2d1557f327ef9b71dfd3 1130 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 172 1128 1.9E-130 T 14-10-2018 IPR017731 Type VI secretion system, IcmF VS_1318 89ced10a74fd2d1557f327ef9b71dfd3 1130 Pfam PF06761 Intracellular multiplication and human macrophage-killing 489 768 5.8E-32 T 14-10-2018 IPR009612 ImcF-related VS_1318 89ced10a74fd2d1557f327ef9b71dfd3 1130 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1080 4.5E-46 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VS_1851 5a26988cdfcd6baa85ec9d5ae1fc9778 236 Pfam PF11140 Protein of unknown function (DUF2913) 20 231 2.1E-79 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 VS_0092 ed842c3f632942412945fbac772e7b02 107 Pfam PF10625 Universal stress protein B (UspB) 1 107 5.2E-53 T 14-10-2018 IPR019598 Universal stress protein B VS_0092 ed842c3f632942412945fbac772e7b02 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.694 T 14-10-2018 IPR019598 Universal stress protein B VS_0538 9e99bcd3d7907f698c7c30aa84100ba7 143 SUPERFAMILY SSF54534 4 142 1.18E-34 T 14-10-2018 VS_0538 9e99bcd3d7907f698c7c30aa84100ba7 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 92 1.3E-11 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VS_0538 9e99bcd3d7907f698c7c30aa84100ba7 143 Gene3D G3DSA:2.40.10.330 72 128 1.0E-42 T 14-10-2018 VS_0538 9e99bcd3d7907f698c7c30aa84100ba7 143 Gene3D G3DSA:3.10.50.40 13 140 1.0E-42 T 14-10-2018 VS_1000 370e20400afc0f3522ddbcd874786410 321 Pfam PF04392 ABC transporter substrate binding protein 29 317 1.3E-98 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein VS_1000 370e20400afc0f3522ddbcd874786410 321 Gene3D G3DSA:3.40.50.2300 143 314 1.1E-91 T 14-10-2018 VS_1000 370e20400afc0f3522ddbcd874786410 321 Gene3D G3DSA:3.40.50.2300 47 292 1.1E-91 T 14-10-2018 VS_1000 370e20400afc0f3522ddbcd874786410 321 SUPERFAMILY SSF53822 57 276 1.65E-11 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VS_II1205 f388deb7b747ee4d553ef6612c617be2 594 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 1.8E-36 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VS_II1205 f388deb7b747ee4d553ef6612c617be2 594 SUPERFAMILY SSF53850 117 592 2.17E-66 T 14-10-2018 VS_II1205 f388deb7b747ee4d553ef6612c617be2 594 Gene3D G3DSA:3.40.190.10 146 363 2.7E-33 T 14-10-2018 VS_II1205 f388deb7b747ee4d553ef6612c617be2 594 Gene3D G3DSA:3.10.105.10 364 510 2.7E-33 T 14-10-2018 VS_II1205 f388deb7b747ee4d553ef6612c617be2 594 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 430 1.2E-23 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 PIRSF PIRSF000137 1 540 2.4E-156 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 Gene3D G3DSA:3.30.560.10 43 467 8.8E-185 T 14-10-2018 VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 Gene3D G3DSA:3.50.50.60 4 529 8.8E-185 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 Pfam PF00732 GMC oxidoreductase 4 294 1.2E-90 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 Pfam PF05199 GMC oxidoreductase 387 523 8.2E-42 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 SUPERFAMILY SSF54373 289 472 1.08E-46 T 14-10-2018 VS_II0703 87b1508fa4f8d4efb986e88d0ade5808 549 SUPERFAMILY SSF51905 3 533 2.43E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_0778 b49645569f87b4fc546da75f496071b9 176 SUPERFAMILY SSF54637 8 151 1.93E-29 T 14-10-2018 IPR029069 HotDog domain superfamily VS_0778 b49645569f87b4fc546da75f496071b9 176 Gene3D G3DSA:3.10.129.10 6 142 1.7E-22 T 14-10-2018 VS_0778 b49645569f87b4fc546da75f496071b9 176 Pfam PF13279 Thioesterase-like superfamily 18 122 4.2E-11 T 14-10-2018 VS_2741 de40b62261b32a7c43e0ef3778227b30 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 9.9E-61 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VS_2741 de40b62261b32a7c43e0ef3778227b30 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 6.8E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VS_2741 de40b62261b32a7c43e0ef3778227b30 153 Gene3D G3DSA:2.30.30.20 101 153 1.7E-24 T 14-10-2018 VS_2741 de40b62261b32a7c43e0ef3778227b30 153 SUPERFAMILY SSF54893 2 100 1.2E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VS_2741 de40b62261b32a7c43e0ef3778227b30 153 Gene3D G3DSA:3.30.70.140 1 100 3.4E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VS_2741 de40b62261b32a7c43e0ef3778227b30 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 6.0E-43 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VS_2741 de40b62261b32a7c43e0ef3778227b30 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 9.2E-19 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VS_2741 de40b62261b32a7c43e0ef3778227b30 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.993 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VS_2741 de40b62261b32a7c43e0ef3778227b30 153 SUPERFAMILY SSF57825 101 151 3.66E-16 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VS_0060 925682930c156b07204d399ff0882dcf 318 SUPERFAMILY SSF53850 109 312 7.71E-32 T 14-10-2018 VS_0060 925682930c156b07204d399ff0882dcf 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 4.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_0060 925682930c156b07204d399ff0882dcf 318 SUPERFAMILY SSF46785 15 133 1.46E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_0060 925682930c156b07204d399ff0882dcf 318 Pfam PF03466 LysR substrate binding domain 109 311 6.7E-36 T 14-10-2018 IPR005119 LysR, substrate-binding VS_0060 925682930c156b07204d399ff0882dcf 318 Gene3D G3DSA:3.40.190.10 187 287 5.2E-29 T 14-10-2018 VS_0060 925682930c156b07204d399ff0882dcf 318 Gene3D G3DSA:1.10.10.10 17 104 3.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_0060 925682930c156b07204d399ff0882dcf 318 Gene3D G3DSA:3.40.190.10 113 309 5.2E-29 T 14-10-2018 VS_3012 d94f0906f86cfe4969781874f69f8351 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.652 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VS_3012 d94f0906f86cfe4969781874f69f8351 284 Gene3D G3DSA:1.10.357.140 19 178 1.3E-44 T 14-10-2018 VS_3012 d94f0906f86cfe4969781874f69f8351 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.3E-68 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VS_3012 d94f0906f86cfe4969781874f69f8351 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 7.4E-106 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 5.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 5.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 5.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 5.7E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 SUPERFAMILY SSF52788 1 148 4.84E-43 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 SMART SM00226 2 148 6.1E-35 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 Gene3D G3DSA:3.40.50.2300 1 149 6.1E-53 T 14-10-2018 VS_1014 8ac93f60b198b7b31c0c5519ca1e44b9 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 1.1E-33 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VS_0644 4e7b740f154f278db1b84e7cb01f0b4d 103 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 23.858 T 14-10-2018 IPR005346 RnfH protein VS_0644 4e7b740f154f278db1b84e7cb01f0b4d 103 Gene3D G3DSA:3.10.20.280 2 92 3.0E-32 T 14-10-2018 IPR037021 RnfH superfamily VS_0644 4e7b740f154f278db1b84e7cb01f0b4d 103 SUPERFAMILY SSF54285 6 82 1.57E-24 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VS_0644 4e7b740f154f278db1b84e7cb01f0b4d 103 Pfam PF03658 RnfH family Ubiquitin 8 90 1.9E-32 T 14-10-2018 IPR005346 RnfH protein VS_0286 86b8802fb8d65e41a112cab348277242 402 Pfam PF01103 Surface antigen 185 319 2.8E-5 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VS_0286 86b8802fb8d65e41a112cab348277242 402 Gene3D G3DSA:2.40.160.50 167 399 4.2E-12 T 14-10-2018 VS_2476 d6b8815e373450f13365d02861ec5f8f 137 Pfam PF01047 MarR family 32 89 1.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2476 d6b8815e373450f13365d02861ec5f8f 137 SMART SM00347 24 125 1.6E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2476 d6b8815e373450f13365d02861ec5f8f 137 SUPERFAMILY SSF46785 29 135 6.25E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2476 d6b8815e373450f13365d02861ec5f8f 137 Gene3D G3DSA:1.10.10.10 2 137 3.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2476 d6b8815e373450f13365d02861ec5f8f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 7.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2476 d6b8815e373450f13365d02861ec5f8f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 7.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2476 d6b8815e373450f13365d02861ec5f8f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 7.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2476 d6b8815e373450f13365d02861ec5f8f 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 7.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_1768 7a07c501a4ce8632355bd02e6c582e42 268 SUPERFAMILY SSF89392 107 216 9.81E-5 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VS_1768 7a07c501a4ce8632355bd02e6c582e42 268 Gene3D G3DSA:2.50.20.10 31 266 3.2E-93 T 14-10-2018 VS_1768 7a07c501a4ce8632355bd02e6c582e42 268 Pfam PF17131 Outer membrane lipoprotein-sorting protein 83 266 3.8E-65 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VS_2498 7b666f5b48b0acb345b636995ed97a48 429 SUPERFAMILY SSF51261 144 388 2.09E-69 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_2498 7b666f5b48b0acb345b636995ed97a48 429 Gene3D G3DSA:3.10.450.350 70 164 2.2E-11 T 14-10-2018 VS_2498 7b666f5b48b0acb345b636995ed97a48 429 Pfam PF01551 Peptidase family M23 295 386 1.0E-30 T 14-10-2018 IPR016047 Peptidase M23 VS_2498 7b666f5b48b0acb345b636995ed97a48 429 Gene3D G3DSA:2.70.70.10 266 395 3.7E-79 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_2498 7b666f5b48b0acb345b636995ed97a48 429 Gene3D G3DSA:3.10.450.350 173 409 3.7E-79 T 14-10-2018 VS_2498 7b666f5b48b0acb345b636995ed97a48 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 2.3E-5 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 SMART SM00226 3 145 1.9E-53 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 2.6E-37 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 SUPERFAMILY SSF52788 1 146 1.31E-41 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 Gene3D G3DSA:3.40.50.2300 1 146 4.2E-51 T 14-10-2018 VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 1.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_0214 5ef02bf7fa8e48f98473ddd3ca72ca9a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 1.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VS_1533 9332e5d30f587d43adeb96d062c9e7ff 366 Pfam PF13439 Glycosyltransferase Family 4 22 179 3.9E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VS_1533 9332e5d30f587d43adeb96d062c9e7ff 366 Pfam PF00534 Glycosyl transferases group 1 187 326 5.6E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VS_1533 9332e5d30f587d43adeb96d062c9e7ff 366 SUPERFAMILY SSF53756 11 359 8.38E-62 T 14-10-2018 VS_1533 9332e5d30f587d43adeb96d062c9e7ff 366 Gene3D G3DSA:3.40.50.2000 58 359 3.5E-54 T 14-10-2018 VS_1533 9332e5d30f587d43adeb96d062c9e7ff 366 Gene3D G3DSA:3.40.50.2000 176 348 3.5E-54 T 14-10-2018 VS_1920 c2b56793bc152168dcc8b0bbb727f00a 365 Pfam PF07433 Protein of unknown function (DUF1513) 72 364 1.5E-107 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VS_1920 c2b56793bc152168dcc8b0bbb727f00a 365 Gene3D G3DSA:2.130.10.10 50 228 1.5E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VS_1920 c2b56793bc152168dcc8b0bbb727f00a 365 SUPERFAMILY SSF50969 68 316 1.41E-12 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VS_1920 c2b56793bc152168dcc8b0bbb727f00a 365 PIRSF PIRSF028101 4 365 7.0E-146 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VS_2022 5bc1a2d3bf2ba7a31ff64f53eb02e8e3 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 5.7E-68 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VS_2022 5bc1a2d3bf2ba7a31ff64f53eb02e8e3 204 PIRSF PIRSF000495 4 204 6.0E-64 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VS_2022 5bc1a2d3bf2ba7a31ff64f53eb02e8e3 204 Gene3D G3DSA:3.40.50.880 2 204 1.1E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_2022 5bc1a2d3bf2ba7a31ff64f53eb02e8e3 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.352 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VS_2022 5bc1a2d3bf2ba7a31ff64f53eb02e8e3 204 SUPERFAMILY SSF52317 5 203 1.27E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_2022 5bc1a2d3bf2ba7a31ff64f53eb02e8e3 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 1.1E-16 T 14-10-2018 IPR017926 Glutamine amidotransferase VS_II0548 b130d2432d9092847653f8d6d5e00bdd 84 Gene3D G3DSA:1.20.1280.290 27 77 1.5E-6 T 14-10-2018 VS_II0548 b130d2432d9092847653f8d6d5e00bdd 84 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 67 2.0E-28 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 VS_II0548 b130d2432d9092847653f8d6d5e00bdd 84 Pfam PF10688 Bacterial inner membrane protein 5 73 4.8E-8 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VS_0870 1664ec01dfe98bfd835bcc165eb6e0ae 213 PIRSF PIRSF006324 1 212 9.3E-62 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_0870 1664ec01dfe98bfd835bcc165eb6e0ae 213 Pfam PF01810 LysE type translocator 15 208 2.2E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_II0882 30349fb5a496bb8b1c0de983d4a157c0 164 Pfam PF13673 Acetyltransferase (GNAT) domain 28 156 4.0E-24 T 14-10-2018 IPR000182 GNAT domain VS_II0882 30349fb5a496bb8b1c0de983d4a157c0 164 SUPERFAMILY SSF55729 3 159 1.69E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0882 30349fb5a496bb8b1c0de983d4a157c0 164 Gene3D G3DSA:3.40.630.30 2 161 3.5E-41 T 14-10-2018 VS_1319 13018219661bf06fc47d5150c5748d1c 400 Pfam PF05036 Sporulation related domain 318 374 8.6E-7 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VS_1319 13018219661bf06fc47d5150c5748d1c 400 Gene3D G3DSA:1.25.40.590 50 206 7.0E-36 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VS_1319 13018219661bf06fc47d5150c5748d1c 400 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 53 243 7.7E-32 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VS_1319 13018219661bf06fc47d5150c5748d1c 400 Pfam PF09850 Type VI secretion system protein DotU 57 245 3.7E-34 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VS_2453 5c74773c3afcd2cc92c91a91e648a503 70 Gene3D G3DSA:1.10.720.30 12 70 1.5E-32 T 14-10-2018 IPR036361 SAP domain superfamily VS_2453 5c74773c3afcd2cc92c91a91e648a503 70 Pfam PF09905 DNA-binding protein VF530 5 66 3.1E-36 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Gene3D G3DSA:2.60.40.1120 4717 4792 1.0E-7 T 14-10-2018 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 SUPERFAMILY SSF49464 4716 4800 1.09E-8 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Gene3D G3DSA:2.60.40.2750 2924 3006 1.7E-5 T 14-10-2018 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Gene3D G3DSA:2.60.40.2750 4168 4249 4.9E-5 T 14-10-2018 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Gene3D G3DSA:2.60.40.2750 506 568 3.7E-8 T 14-10-2018 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Gene3D G3DSA:2.60.40.2750 315 377 1.1E-6 T 14-10-2018 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Gene3D G3DSA:2.60.40.2750 889 951 1.7E-8 T 14-10-2018 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Gene3D G3DSA:2.60.40.2750 1272 1335 2.1E-6 T 14-10-2018 VS_II0856 648b23c9726bf7eef50812efef64ee02 5372 Pfam PF13620 Carboxypeptidase regulatory-like domain 4716 4787 1.2E-8 T 14-10-2018 VS_0150 42823632f23638c3104917fced674022 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 257 45.702 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VS_0150 42823632f23638c3104917fced674022 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 255 4.5E-107 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VS_0150 42823632f23638c3104917fced674022 258 Gene3D G3DSA:3.40.50.1820 2 257 4.1E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_0150 42823632f23638c3104917fced674022 258 SUPERFAMILY SSF53474 4 255 1.65E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_0150 42823632f23638c3104917fced674022 258 Pfam PF00561 alpha/beta hydrolase fold 16 244 2.8E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_II0382 e62993a9c7cae93c1f7de2d60c8ef09a 104 Gene3D G3DSA:1.10.260.40 6 101 8.9E-18 T 14-10-2018 VS_II0382 e62993a9c7cae93c1f7de2d60c8ef09a 104 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 18 101 2.3E-8 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 VS_II0382 e62993a9c7cae93c1f7de2d60c8ef09a 104 SUPERFAMILY SSF47413 43 90 1.88E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_2558 1d58946d1cff25591a953e27d522a71f 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_2558 1d58946d1cff25591a953e27d522a71f 82 SUPERFAMILY SSF54565 1 76 6.28E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2558 1d58946d1cff25591a953e27d522a71f 82 Gene3D G3DSA:3.30.1320.10 1 82 6.6E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2558 1d58946d1cff25591a953e27d522a71f 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 7.7E-27 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2558 1d58946d1cff25591a953e27d522a71f 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.063 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2558 1d58946d1cff25591a953e27d522a71f 82 Pfam PF00886 Ribosomal protein S16 8 68 4.0E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1254 0d13019fb6dff9a780dd75c1eda2c73f 244 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 18 244 3.8E-35 T 14-10-2018 IPR009331 Oligogalacturonate-specific porin VS_1254 0d13019fb6dff9a780dd75c1eda2c73f 244 Gene3D G3DSA:2.40.160.40 22 244 2.7E-66 T 14-10-2018 VS_1254 0d13019fb6dff9a780dd75c1eda2c73f 244 SUPERFAMILY SSF56935 70 244 1.04E-6 T 14-10-2018 VS_3142 5e0850a51687c10772414ee31b92999a 507 Gene3D G3DSA:3.40.50.300 188 500 2.5E-54 T 14-10-2018 VS_3142 5e0850a51687c10772414ee31b92999a 507 Gene3D G3DSA:3.30.230.10 1 166 1.6E-5 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VS_3142 5e0850a51687c10772414ee31b92999a 507 SUPERFAMILY SSF54211 2 167 1.1E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VS_3142 5e0850a51687c10772414ee31b92999a 507 SUPERFAMILY SSF52540 188 501 3.28E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_3142 5e0850a51687c10772414ee31b92999a 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 5.7E-89 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain VS_3142 5e0850a51687c10772414ee31b92999a 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.3E-31 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain VS_3142 5e0850a51687c10772414ee31b92999a 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 1.3E-207 T 14-10-2018 IPR004482 Mg chelatase-related protein VS_3142 5e0850a51687c10772414ee31b92999a 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.0E-45 T 14-10-2018 VS_3142 5e0850a51687c10772414ee31b92999a 507 SMART SM00382 210 390 2.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1781 d85623ccc955dece10010be9b48a56b6 277 SUPERFAMILY SSF46894 13 104 2.3E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_1781 d85623ccc955dece10010be9b48a56b6 277 SMART SM00862 29 103 4.0E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_1781 d85623ccc955dece10010be9b48a56b6 277 Gene3D G3DSA:1.10.10.10 8 110 1.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1781 d85623ccc955dece10010be9b48a56b6 277 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 103 2.7E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0460 544bd3223c71a8828efa31b2090f64ad 728 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.3E-238 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VS_II0460 544bd3223c71a8828efa31b2090f64ad 728 Pfam PF13515 Fusaric acid resistance protein-like 405 524 5.5E-22 T 14-10-2018 VS_II0460 544bd3223c71a8828efa31b2090f64ad 728 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS VS_II0460 544bd3223c71a8828efa31b2090f64ad 728 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 5.1E-110 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VS_1789 1e712cf36a2c17f6e193bb563fa387b9 147 Pfam PF12531 DNA-K related protein 4 144 1.9E-48 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 VS_II1283 31a73913d892b6cce41fda122ca0036b 267 Gene3D G3DSA:1.10.3720.10 70 266 1.7E-28 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1283 31a73913d892b6cce41fda122ca0036b 267 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 17 266 8.0E-85 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 VS_II1283 31a73913d892b6cce41fda122ca0036b 267 SUPERFAMILY SSF161098 72 255 5.1E-35 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1283 31a73913d892b6cce41fda122ca0036b 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 254 1.6E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0686 2bf7e6cd83dcdad2dbbabf0311e5c100 172 Gene3D G3DSA:2.60.40.4070 85 143 5.2E-9 T 14-10-2018 VS_II0686 2bf7e6cd83dcdad2dbbabf0311e5c100 172 PIRSF PIRSF014995 1 172 9.5E-61 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 VS_II0686 2bf7e6cd83dcdad2dbbabf0311e5c100 172 Pfam PF10029 Predicted periplasmic protein (DUF2271) 31 163 4.9E-46 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 VS_1748 2488ff23de3431c207c68702f4a71a5d 170 SUPERFAMILY SSF55083 1 151 1.83E-40 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_1748 2488ff23de3431c207c68702f4a71a5d 170 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 3.5E-27 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_1748 2488ff23de3431c207c68702f4a71a5d 170 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 2.8E-26 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_1748 2488ff23de3431c207c68702f4a71a5d 170 Gene3D G3DSA:3.30.70.560 1 155 2.7E-35 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_2001 2d2b7e2d34d84f5f36f13db4622c1c76 301 Pfam PF02833 DHHA2 domain 180 297 2.4E-14 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VS_2001 2d2b7e2d34d84f5f36f13db4622c1c76 301 Pfam PF01368 DHH family 2 142 5.9E-22 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VS_2001 2d2b7e2d34d84f5f36f13db4622c1c76 301 SMART SM01131 178 300 5.9E-34 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VS_2001 2d2b7e2d34d84f5f36f13db4622c1c76 301 Gene3D G3DSA:3.10.310.20 187 300 1.2E-21 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VS_2001 2d2b7e2d34d84f5f36f13db4622c1c76 301 Gene3D G3DSA:3.90.1640.10 1 186 2.8E-64 T 14-10-2018 VS_2001 2d2b7e2d34d84f5f36f13db4622c1c76 301 SUPERFAMILY SSF64182 1 298 1.31E-66 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VS_0421 6df3acad13f97a5e6c12a8cd3318b3b6 274 SUPERFAMILY SSF56300 13 259 8.75E-59 T 14-10-2018 VS_0421 6df3acad13f97a5e6c12a8cd3318b3b6 274 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 205 260 8.0E-19 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VS_0421 6df3acad13f97a5e6c12a8cd3318b3b6 274 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 4.8E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VS_0421 6df3acad13f97a5e6c12a8cd3318b3b6 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 260 40.785 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VS_0421 6df3acad13f97a5e6c12a8cd3318b3b6 274 Gene3D G3DSA:3.60.21.10 3 270 7.3E-72 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_2748 d585cc0eb1f02e237323cf311fd542aa 163 Pfam PF02470 MlaD protein 40 118 1.8E-20 T 14-10-2018 IPR003399 Mce/MlaD VS_2748 d585cc0eb1f02e237323cf311fd542aa 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 7.8E-55 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VS_2460 efdbe4a04c407d4616f4c7e632ec9ca1 246 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 9 242 51.375 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VS_2460 efdbe4a04c407d4616f4c7e632ec9ca1 246 Gene3D G3DSA:3.40.50.1580 6 245 1.1E-77 T 14-10-2018 VS_2460 efdbe4a04c407d4616f4c7e632ec9ca1 246 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 69 84 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VS_2460 efdbe4a04c407d4616f4c7e632ec9ca1 246 Pfam PF01048 Phosphorylase superfamily 22 225 4.1E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VS_2460 efdbe4a04c407d4616f4c7e632ec9ca1 246 SUPERFAMILY SSF53167 10 241 6.68E-93 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VS_2460 efdbe4a04c407d4616f4c7e632ec9ca1 246 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 12 241 3.9E-118 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VS_II0738 0b4c58bcf9b0c9c54524929449f7b6ea 384 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 300 2.3E-74 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VS_2404 8b63c7802a76adef838bbfe0cd035b3d 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.1E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VS_2404 8b63c7802a76adef838bbfe0cd035b3d 80 PIRSF PIRSF006488 1 80 6.1E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VS_2404 8b63c7802a76adef838bbfe0cd035b3d 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.14 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VS_2404 8b63c7802a76adef838bbfe0cd035b3d 80 SUPERFAMILY SSF116842 2 71 2.09E-21 T 14-10-2018 VS_2404 8b63c7802a76adef838bbfe0cd035b3d 80 Gene3D G3DSA:1.10.287.1040 4 79 2.4E-23 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VS_2404 8b63c7802a76adef838bbfe0cd035b3d 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.0E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VS_2404 8b63c7802a76adef838bbfe0cd035b3d 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 4.0E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VS_1147 bdc0b1c94093a0fa3329387518045e2b 98 SUPERFAMILY SSF54909 1 98 3.4E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_1147 bdc0b1c94093a0fa3329387518045e2b 98 Gene3D G3DSA:3.30.70.1060 1 98 2.4E-38 T 14-10-2018 VS_1147 bdc0b1c94093a0fa3329387518045e2b 98 Pfam PF03795 YCII-related domain 1 95 1.3E-28 T 14-10-2018 IPR005545 YCII-related VS_II0029 e1cbd5f1c7bfa7e0119c3d9267d265ec 279 SUPERFAMILY SSF46689 228 265 1.48E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0029 e1cbd5f1c7bfa7e0119c3d9267d265ec 279 SMART SM00342 177 263 1.5E-4 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II0029 e1cbd5f1c7bfa7e0119c3d9267d265ec 279 Gene3D G3DSA:1.10.10.60 167 266 1.8E-16 T 14-10-2018 VS_II0029 e1cbd5f1c7bfa7e0119c3d9267d265ec 279 Pfam PF12833 Helix-turn-helix domain 185 264 4.1E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1126 36bce8720abce82f6bc178f38726d398 325 Gene3D G3DSA:3.40.50.1980 157 325 7.0E-46 T 14-10-2018 VS_II1126 36bce8720abce82f6bc178f38726d398 325 Gene3D G3DSA:3.40.50.1980 46 155 1.1E-28 T 14-10-2018 VS_II1126 36bce8720abce82f6bc178f38726d398 325 SUPERFAMILY SSF53807 46 310 1.02E-55 T 14-10-2018 VS_II1126 36bce8720abce82f6bc178f38726d398 325 Pfam PF01497 Periplasmic binding protein 70 298 8.6E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_3026 d73e20a01a447e0f83bcaed945245159 78 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 78 3.2E-28 T 14-10-2018 IPR019620 Putative metal-binding protein VS_3026 d73e20a01a447e0f83bcaed945245159 78 Pfam PF10678 Protein of unknown function (DUF2492) 4 77 4.1E-27 T 14-10-2018 IPR019620 Putative metal-binding protein VS_1776 7e16727c3b2ed4a80c90e14f7602b332 437 Pfam PF06629 MltA-interacting protein MipA 49 239 2.0E-26 T 14-10-2018 IPR010583 MltA-interacting MipA VS_II0143 5d1f68b964c25c030ef888ce52b6e5cf 324 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 309 1.3E-90 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VS_II0143 5d1f68b964c25c030ef888ce52b6e5cf 324 Gene3D G3DSA:3.40.190.170 21 322 2.7E-102 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VS_II0143 5d1f68b964c25c030ef888ce52b6e5cf 324 PIRSF PIRSF006470 1 324 2.7E-99 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VS_II0143 5d1f68b964c25c030ef888ce52b6e5cf 324 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 2.2E-78 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VS_0172 e771bd42910859479b89862b4ac9d9bd 243 Gene3D G3DSA:3.20.20.70 4 240 7.0E-37 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_0172 e771bd42910859479b89862b4ac9d9bd 243 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 209 3.8E-27 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VS_0172 e771bd42910859479b89862b4ac9d9bd 243 SUPERFAMILY SSF51366 1 223 1.1E-37 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VS_2015 45ac4c864464f494338b69c245b506b5 164 Gene3D G3DSA:2.40.100.10 1 164 5.6E-64 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_2015 45ac4c864464f494338b69c245b506b5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.3E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_2015 45ac4c864464f494338b69c245b506b5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.3E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_2015 45ac4c864464f494338b69c245b506b5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.3E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_2015 45ac4c864464f494338b69c245b506b5 164 PIRSF PIRSF001467 1 163 1.2E-26 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VS_2015 45ac4c864464f494338b69c245b506b5 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VS_2015 45ac4c864464f494338b69c245b506b5 164 SUPERFAMILY SSF50891 1 162 2.63E-57 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VS_2015 45ac4c864464f494338b69c245b506b5 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 159 2.2E-46 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VS_II0376 e34c5530f25495e94e3bf86ccccf1b8d 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 6.0E-22 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VS_II0376 e34c5530f25495e94e3bf86ccccf1b8d 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 3.5E-31 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VS_2005 4ce6cc8b22346a1f01fd993e77a18d0e 60 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 9 57 4.4E-27 T 14-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE VS_2005 4ce6cc8b22346a1f01fd993e77a18d0e 60 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 6.1E-24 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VS_2661 38a04cfa982efa0192807daf0b1c9e1e 394 Gene3D G3DSA:3.30.2110.10 20 196 3.2E-44 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VS_2661 38a04cfa982efa0192807daf0b1c9e1e 394 PIRSF PIRSF026782 14 385 6.9E-100 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VS_2661 38a04cfa982efa0192807daf0b1c9e1e 394 SUPERFAMILY SSF111342 8 299 2.62E-71 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VS_2661 38a04cfa982efa0192807daf0b1c9e1e 394 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 18 379 25.205 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VS_2661 38a04cfa982efa0192807daf0b1c9e1e 394 Pfam PF01888 CbiD 18 282 5.6E-80 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 VS_1977 cc5c37d3be78242f1579952597a643da 318 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 29 314 8.0E-180 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VS_1977 cc5c37d3be78242f1579952597a643da 318 SUPERFAMILY SSF53335 14 290 1.51E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1977 cc5c37d3be78242f1579952597a643da 318 Gene3D G3DSA:3.40.50.150 89 293 5.5E-42 T 14-10-2018 VS_II0374 4e9db03ec8847a78db9ec9a9e92d8ce9 117 Gene3D G3DSA:1.10.260.40 2 88 2.2E-10 T 14-10-2018 VS_II0374 4e9db03ec8847a78db9ec9a9e92d8ce9 117 SUPERFAMILY SSF47413 6 81 6.88E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_II0350 c7b52e51689fd5846cf330023d1c2513 208 Pfam PF08291 Peptidase M15 95 176 2.6E-6 T 14-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 VS_II0350 c7b52e51689fd5846cf330023d1c2513 208 SUPERFAMILY SSF55166 102 208 6.28E-7 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_II0381 ccf66f326808799e1a3719d57ef9a174 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 4 105 3.2E-10 T 14-10-2018 IPR009387 Toxin HigB-2 VS_II0381 ccf66f326808799e1a3719d57ef9a174 110 PIRSF PIRSF039032 1 110 2.1E-45 T 14-10-2018 IPR009387 Toxin HigB-2 VS_II1131 32c25fed27cf004a04bca6cb6a124bfc 405 Gene3D G3DSA:1.20.1250.20 208 393 1.8E-14 T 14-10-2018 VS_II1131 32c25fed27cf004a04bca6cb6a124bfc 405 Gene3D G3DSA:1.20.1250.20 2 188 9.7E-20 T 14-10-2018 VS_II1131 32c25fed27cf004a04bca6cb6a124bfc 405 Pfam PF07690 Major Facilitator Superfamily 9 263 1.1E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1131 32c25fed27cf004a04bca6cb6a124bfc 405 SUPERFAMILY SSF103473 5 390 8.37E-39 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II1447 4f90873a954625484f281d8b55ce1ca8 206 SUPERFAMILY SSF88697 23 202 4.97E-31 T 14-10-2018 IPR015947 PUA-like superfamily VS_II1447 4f90873a954625484f281d8b55ce1ca8 206 Gene3D G3DSA:2.30.130.40 22 127 2.6E-15 T 14-10-2018 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 Gene3D G3DSA:3.40.50.300 11 229 1.0E-68 T 14-10-2018 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 Pfam PF08402 TOBE domain 286 365 7.7E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 365 4.2E-156 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 SUPERFAMILY SSF52540 12 249 8.25E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 Pfam PF00005 ABC transporter 29 168 8.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 Gene3D G3DSA:2.40.50.140 293 314 1.8E-12 T 14-10-2018 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 SUPERFAMILY SSF50331 244 365 1.98E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 Gene3D G3DSA:2.40.50.940 230 292 1.8E-12 T 14-10-2018 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1474 2d09c1fbb360cd63d1f8ee60e75ee552 371 SMART SM00382 36 219 5.8E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 2.0E-51 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 Gene3D G3DSA:3.40.50.880 1 193 3.4E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.2E-43 T 14-10-2018 IPR017926 Glutamine amidotransferase VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.0E-33 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.0E-33 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.0E-33 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.0E-33 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.0E-33 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.0E-33 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.2E-12 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.2E-12 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.2E-12 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 SUPERFAMILY SSF52317 3 192 3.8E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 7.4E-5 T 14-10-2018 VS_1967 2319121ae0bdcfcf8c21e199e36c9f05 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 7.4E-5 T 14-10-2018 VS_II0109 a147562effa1dc1ca6d3077bff791495 414 SUPERFAMILY SSF51395 6 348 1.3E-95 T 14-10-2018 VS_II0109 a147562effa1dc1ca6d3077bff791495 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 343 4.7E-54 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VS_II0109 a147562effa1dc1ca6d3077bff791495 414 Gene3D G3DSA:3.20.20.70 5 354 1.8E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_1791 b7cb4a7d8d90ad2f03b7d368d5f79196 158 Pfam PF11163 Protein of unknown function (DUF2947) 4 155 7.2E-71 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 SUPERFAMILY SSF51735 143 307 9.38E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 1.6E-177 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 2.2E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 SMART SM00829 14 340 7.7E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 1.7E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 SUPERFAMILY SSF50129 3 175 1.16E-50 T 14-10-2018 IPR011032 GroES-like superfamily VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 Gene3D G3DSA:3.90.180.10 22 330 3.2E-115 T 14-10-2018 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 Gene3D G3DSA:3.40.50.720 155 288 3.2E-115 T 14-10-2018 VS_II0437 7679bbd58b32ad9b92277a367fdc7947 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.087 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VS_1484 89e0131efa9646bc1a8cc27576ae5200 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 7.9E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_1484 89e0131efa9646bc1a8cc27576ae5200 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_1484 89e0131efa9646bc1a8cc27576ae5200 202 SUPERFAMILY SSF54862 1 183 6.38E-48 T 14-10-2018 VS_1484 89e0131efa9646bc1a8cc27576ae5200 202 Gene3D G3DSA:3.30.70.20 1 187 9.3E-34 T 14-10-2018 VS_2683 bcb23c035d8a80d6919b6d86a4b70e1b 238 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 4.5E-83 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VS_2683 bcb23c035d8a80d6919b6d86a4b70e1b 238 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 33.941 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VS_2683 bcb23c035d8a80d6919b6d86a4b70e1b 238 SUPERFAMILY SSF51419 1 228 2.22E-79 T 14-10-2018 IPR029066 PLP-binding barrel VS_2683 bcb23c035d8a80d6919b6d86a4b70e1b 238 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 1.1E-31 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VS_2683 bcb23c035d8a80d6919b6d86a4b70e1b 238 PIRSF PIRSF004848 1 236 3.7E-74 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VS_2683 bcb23c035d8a80d6919b6d86a4b70e1b 238 Gene3D G3DSA:3.20.20.10 1 237 4.6E-84 T 14-10-2018 IPR029066 PLP-binding barrel VS_2683 bcb23c035d8a80d6919b6d86a4b70e1b 238 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VS_II1384 96dbda726608835c8bb64ae129130c85 1069 Pfam PF12215 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 79 486 1.6E-19 T 14-10-2018 IPR024462 Glycosyl-hydrolase family 116, N-terminal KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45|Reactome: R-HSA-1660662 VS_II1384 96dbda726608835c8bb64ae129130c85 1069 Pfam PF04685 Glycosyl-hydrolase family 116, catalytic region 554 975 1.5E-61 T 14-10-2018 IPR006775 Glycosyl-hydrolase family 116, catalytic region GO:0004553 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45|Reactome: R-HSA-1660662 VS_II1384 96dbda726608835c8bb64ae129130c85 1069 SUPERFAMILY SSF48208 507 975 1.12E-30 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VS_II1384 96dbda726608835c8bb64ae129130c85 1069 Gene3D G3DSA:1.50.10.10 608 798 1.1E-18 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VS_II0905 9c1225c1226419bb03fc319371bce59f 136 Gene3D G3DSA:3.30.1330.40 14 131 1.4E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0905 9c1225c1226419bb03fc319371bce59f 136 SUPERFAMILY SSF55298 16 131 2.2E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0905 9c1225c1226419bb03fc319371bce59f 136 Pfam PF01042 Endoribonuclease L-PSP 22 130 5.5E-23 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_0367 6d8b559755ec43280390696effabb4a9 159 Pfam PF00186 Dihydrofolate reductase 3 159 7.3E-59 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VS_0367 6d8b559755ec43280390696effabb4a9 159 PIRSF PIRSF000194 1 159 4.0E-60 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VS_0367 6d8b559755ec43280390696effabb4a9 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 7.2E-15 T 14-10-2018 VS_0367 6d8b559755ec43280390696effabb4a9 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.2E-15 T 14-10-2018 VS_0367 6d8b559755ec43280390696effabb4a9 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.2E-15 T 14-10-2018 VS_0367 6d8b559755ec43280390696effabb4a9 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.2E-15 T 14-10-2018 VS_0367 6d8b559755ec43280390696effabb4a9 159 SUPERFAMILY SSF53597 1 159 1.51E-56 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_0367 6d8b559755ec43280390696effabb4a9 159 Gene3D G3DSA:3.40.430.10 1 159 1.8E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_0367 6d8b559755ec43280390696effabb4a9 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 VS_1600 39ae3c13ef38d87fd2d646970e31fbe4 124 Gene3D G3DSA:3.10.180.10 7 123 3.5E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_1600 39ae3c13ef38d87fd2d646970e31fbe4 124 SUPERFAMILY SSF54593 12 120 3.49E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_1600 39ae3c13ef38d87fd2d646970e31fbe4 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 2.5E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_II0140 c4572092b1b06940df772b6819c4ee74 162 Pfam PF04074 Domain of unknown function (DUF386) 1 155 3.9E-32 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VS_II0140 c4572092b1b06940df772b6819c4ee74 162 Gene3D G3DSA:2.60.120.370 1 159 1.4E-32 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily VS_II0140 c4572092b1b06940df772b6819c4ee74 162 SUPERFAMILY SSF51197 1 159 6.59E-33 T 14-10-2018 VS_II0140 c4572092b1b06940df772b6819c4ee74 162 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 158 7.2E-23 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VS_2593 18502ee35a771f5204a24802b3950cdd 612 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 18 158 5.2E-24 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VS_2593 18502ee35a771f5204a24802b3950cdd 612 SMART SM00642 176 544 2.9E-123 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_2593 18502ee35a771f5204a24802b3950cdd 612 Pfam PF00128 Alpha amylase, catalytic domain 209 511 7.5E-84 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VS_2593 18502ee35a771f5204a24802b3950cdd 612 Gene3D G3DSA:3.20.20.80 170 545 3.3E-149 T 14-10-2018 VS_2593 18502ee35a771f5204a24802b3950cdd 612 SUPERFAMILY SSF51445 95 550 2.93E-123 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_2593 18502ee35a771f5204a24802b3950cdd 612 Gene3D G3DSA:3.90.400.10 282 343 3.3E-149 T 14-10-2018 VS_2593 18502ee35a771f5204a24802b3950cdd 612 SUPERFAMILY SSF81296 14 130 2.24E-17 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_2593 18502ee35a771f5204a24802b3950cdd 612 Gene3D G3DSA:2.60.40.10 16 162 1.1E-35 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_0249 4ee81a5a9fe6a5d5758fbb8d5a990e3e 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 3.6E-128 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VS_0249 4ee81a5a9fe6a5d5758fbb8d5a990e3e 323 SUPERFAMILY SSF55681 11 321 1.63E-82 T 14-10-2018 VS_0249 4ee81a5a9fe6a5d5758fbb8d5a990e3e 323 Gene3D G3DSA:3.30.930.10 1 323 5.4E-110 T 14-10-2018 VS_0249 4ee81a5a9fe6a5d5758fbb8d5a990e3e 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 9 319 6.3E-46 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VS_0249 4ee81a5a9fe6a5d5758fbb8d5a990e3e 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 52.723 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.2E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 141 7.0E-73 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 2.7E-60 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 PIRSF PIRSF006160 1 162 1.8E-65 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 SUPERFAMILY SSF63411 4 162 1.28E-65 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 Gene3D G3DSA:3.30.1360.80 1 172 7.0E-72 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_2562 de90cf1daa33c199cd74bebfb7cbf437 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.092 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VS_0113 ae2faed487129ad41f166b95e69a2247 212 Pfam PF13489 Methyltransferase domain 61 192 9.8E-17 T 14-10-2018 VS_0113 ae2faed487129ad41f166b95e69a2247 212 Gene3D G3DSA:3.40.50.150 41 203 1.6E-12 T 14-10-2018 VS_0113 ae2faed487129ad41f166b95e69a2247 212 SUPERFAMILY SSF53335 47 198 5.12E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II0936 21a436739a6e888cbb927752b0df1cf8 347 Gene3D G3DSA:3.60.10.10 6 346 3.9E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_II0936 21a436739a6e888cbb927752b0df1cf8 347 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 11 310 1.8E-12 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VS_II0936 21a436739a6e888cbb927752b0df1cf8 347 SUPERFAMILY SSF56219 5 341 2.36E-35 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VS_0758 85e3fdb77f97350ae84d0e447b047216 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.9E-58 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VS_0758 85e3fdb77f97350ae84d0e447b047216 157 PIRSF PIRSF006181 1 157 3.0E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VS_0758 85e3fdb77f97350ae84d0e447b047216 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 2.8E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VS_0758 85e3fdb77f97350ae84d0e447b047216 157 Gene3D G3DSA:3.90.960.10 1 157 3.1E-58 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VS_0758 85e3fdb77f97350ae84d0e447b047216 157 SUPERFAMILY SSF55826 2 156 6.28E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VS_0427 145b97dfe0de406cf55e07b19ea29f87 151 PIRSF PIRSF006318 1 140 1.9E-48 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VS_0427 145b97dfe0de406cf55e07b19ea29f87 151 Pfam PF06295 Protein of unknown function (DUF1043) 6 133 2.9E-44 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 5.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 5.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 5.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 Gene3D G3DSA:3.40.50.720 11 278 3.1E-47 T 14-10-2018 VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 Pfam PF00106 short chain dehydrogenase 13 201 1.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 SUPERFAMILY SSF51735 12 252 1.43E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 6.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 6.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0089 0ca28929c5b9863e2e3056e18f448b19 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 6.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0902 ed37e16c96b2a80b162307e31c730583 1721 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1676 1718 6.2E-15 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal VS_0902 ed37e16c96b2a80b162307e31c730583 1721 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 68 138 9.1E-25 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal VS_0902 ed37e16c96b2a80b162307e31c730583 1721 Gene3D G3DSA:1.20.58.2200 1661 1718 6.1E-14 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily VS_0816 85342256685d41ab16feb412e37dc3c0 684 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 9.1E-21 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VS_0816 85342256685d41ab16feb412e37dc3c0 684 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 449 674 4.2E-49 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VS_0816 85342256685d41ab16feb412e37dc3c0 684 Pfam PF07196 Flagellin hook IN motif 129 177 1.7E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VS_3115 819ff57d3d598941d40148f1026975c6 181 SUPERFAMILY SSF51161 4 175 2.91E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VS_3115 819ff57d3d598941d40148f1026975c6 181 Gene3D G3DSA:2.160.10.10 1 178 1.1E-56 T 14-10-2018 VS_3115 819ff57d3d598941d40148f1026975c6 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 2.7E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VS_3115 819ff57d3d598941d40148f1026975c6 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 40 1.2E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VS_II1170 b6fe0a48fbcd1e3d74b4cc97ee324ebd 264 SUPERFAMILY SSF46894 187 254 1.84E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II1170 b6fe0a48fbcd1e3d74b4cc97ee324ebd 264 Pfam PF00196 Bacterial regulatory proteins, luxR family 195 249 2.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II1170 b6fe0a48fbcd1e3d74b4cc97ee324ebd 264 Gene3D G3DSA:1.10.10.10 182 255 1.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1170 b6fe0a48fbcd1e3d74b4cc97ee324ebd 264 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 237 8.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II1170 b6fe0a48fbcd1e3d74b4cc97ee324ebd 264 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 209 8.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II1170 b6fe0a48fbcd1e3d74b4cc97ee324ebd 264 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 225 8.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_II1170 b6fe0a48fbcd1e3d74b4cc97ee324ebd 264 SMART SM00421 192 249 2.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VS_2112 7727b8fb79ea036988fcf84ba2868fad 255 SUPERFAMILY SSF52540 4 231 3.09E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2112 7727b8fb79ea036988fcf84ba2868fad 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2112 7727b8fb79ea036988fcf84ba2868fad 255 Gene3D G3DSA:3.40.50.300 2 254 8.5E-67 T 14-10-2018 VS_2112 7727b8fb79ea036988fcf84ba2868fad 255 SMART SM00382 26 214 6.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2112 7727b8fb79ea036988fcf84ba2868fad 255 Pfam PF00005 ABC transporter 20 166 4.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1469 be06c963413e84a0e9ec610fab04e179 301 Pfam PF01171 PP-loop family 45 204 3.9E-15 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VS_1469 be06c963413e84a0e9ec610fab04e179 301 Gene3D G3DSA:3.40.50.620 3 276 7.3E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_1469 be06c963413e84a0e9ec610fab04e179 301 PIRSF PIRSF004976 1 285 4.6E-70 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VS_1469 be06c963413e84a0e9ec610fab04e179 301 SUPERFAMILY SSF52402 19 237 2.3E-53 T 14-10-2018 VS_1469 be06c963413e84a0e9ec610fab04e179 301 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 12 273 55.53 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VS_2270 acc09b5934c342205f55721232c790b5 303 Gene3D G3DSA:1.10.10.10 5 107 8.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2270 acc09b5934c342205f55721232c790b5 303 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 107 2.7E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2270 acc09b5934c342205f55721232c790b5 303 SMART SM00862 30 107 3.3E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_2270 acc09b5934c342205f55721232c790b5 303 SUPERFAMILY SSF46894 7 109 2.35E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_2638 c409708093ff3306101ddaf9ab42ff29 199 PIRSF PIRSF006806 1 192 9.6E-39 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VS_2638 c409708093ff3306101ddaf9ab42ff29 199 SUPERFAMILY SSF100950 5 198 6.84E-58 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VS_2638 c409708093ff3306101ddaf9ab42ff29 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 1.2E-53 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VS_2638 c409708093ff3306101ddaf9ab42ff29 199 Gene3D G3DSA:3.40.50.10420 2 197 9.7E-57 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VS_2638 c409708093ff3306101ddaf9ab42ff29 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 5.4E-45 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VS_0507 11183506a0cff48db4f3d90bcdc4089b 242 SUPERFAMILY SSF53335 8 170 3.14E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_0507 11183506a0cff48db4f3d90bcdc4089b 242 Gene3D G3DSA:3.40.50.150 7 239 3.1E-51 T 14-10-2018 VS_0507 11183506a0cff48db4f3d90bcdc4089b 242 Pfam PF05175 Methyltransferase small domain 42 129 2.2E-15 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VS_0507 11183506a0cff48db4f3d90bcdc4089b 242 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 242 52.645 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VS_0507 11183506a0cff48db4f3d90bcdc4089b 242 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_1332 6a5c79bbd68982af1fcdfdfdf34be24a 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 160 3.8E-53 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VS_1332 6a5c79bbd68982af1fcdfdfdf34be24a 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 7.0E-57 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VS_1332 6a5c79bbd68982af1fcdfdfdf34be24a 167 PIRSF PIRSF028301 2 167 1.7E-56 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VS_1541 c6e6bddfc2163a6e62e6edbdc677df8d 502 Pfam PF02321 Outer membrane efflux protein 68 274 1.5E-14 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1541 c6e6bddfc2163a6e62e6edbdc677df8d 502 Pfam PF02321 Outer membrane efflux protein 304 484 6.5E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1541 c6e6bddfc2163a6e62e6edbdc677df8d 502 Gene3D G3DSA:2.20.200.10 105 375 5.3E-111 T 14-10-2018 VS_1541 c6e6bddfc2163a6e62e6edbdc677df8d 502 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 485 1.1E-86 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 VS_1541 c6e6bddfc2163a6e62e6edbdc677df8d 502 Gene3D G3DSA:1.20.1600.10 58 487 5.3E-111 T 14-10-2018 VS_1541 c6e6bddfc2163a6e62e6edbdc677df8d 502 SUPERFAMILY SSF56954 4 487 1.09E-90 T 14-10-2018 VS_0378 4d46b759075ca139826e976129231729 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 7 470 2.9E-262 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 200 213 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 291 305 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 87 100 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 348 359 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 404 417 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 214 227 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 113 121 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 138 153 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 PRINTS PR00415 Aconitase family signature 124 137 3.5E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 Pfam PF00330 Aconitase family (aconitate hydratase) 12 462 6.1E-158 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 Gene3D G3DSA:3.30.499.10 333 470 7.5E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 ProSitePatterns PS00450 Aconitase family signature 1. 344 360 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 6 470 59.436 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 Gene3D G3DSA:3.30.499.20 9 291 8.0E-97 T 14-10-2018 VS_0378 4d46b759075ca139826e976129231729 470 SUPERFAMILY SSF53732 5 470 8.89E-163 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VS_0378 4d46b759075ca139826e976129231729 470 ProSitePatterns PS01244 Aconitase family signature 2. 404 417 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VS_0950 53b3ad8582307fe8bd93bed7629ff91f 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.704 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VS_0950 53b3ad8582307fe8bd93bed7629ff91f 75 SUPERFAMILY SSF158651 1 75 7.98E-29 T 14-10-2018 IPR023202 YejL-like superfamily VS_0950 53b3ad8582307fe8bd93bed7629ff91f 75 Gene3D G3DSA:1.10.3390.10 1 75 6.7E-31 T 14-10-2018 IPR023202 YejL-like superfamily VS_0950 53b3ad8582307fe8bd93bed7629ff91f 75 PIRSF PIRSF006188 1 72 2.6E-34 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VS_0950 53b3ad8582307fe8bd93bed7629ff91f 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 8.7E-21 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VS_0950 53b3ad8582307fe8bd93bed7629ff91f 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-26 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VS_3080 092e03ead5f6c2615e1a89e5ca0d35ad 220 Pfam PF01810 LysE type translocator 16 212 3.4E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_3080 092e03ead5f6c2615e1a89e5ca0d35ad 220 PIRSF PIRSF006324 1 215 3.1E-51 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_2709 c79da3afa713217728eef71685dc6a53 135 Pfam PF09622 Putative integral membrane protein (DUF2391) 18 129 3.1E-9 T 14-10-2018 IPR024464 Protein of unknown function DUF2391 VS_2446 225ddfc2627a2362540ae8d9f2d6e744 176 Pfam PF01478 Type IV leader peptidase family 7 112 2.7E-12 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VS_2446 225ddfc2627a2362540ae8d9f2d6e744 176 Gene3D G3DSA:1.20.120.1220 6 135 7.1E-6 T 14-10-2018 VS_0361 cb0c3bb5a955a07236432662761c41f8 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.4E-43 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0361 cb0c3bb5a955a07236432662761c41f8 103 SUPERFAMILY SSF141091 1 102 2.09E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0361 cb0c3bb5a955a07236432662761c41f8 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0361 cb0c3bb5a955a07236432662761c41f8 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.182 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0361 cb0c3bb5a955a07236432662761c41f8 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 8.2E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_1991 ab68242d75d7e311e1ed63d83a53c9ee 223 Pfam PF04012 PspA/IM30 family 2 217 1.0E-61 T 14-10-2018 IPR007157 PspA/IM30 VS_1991 ab68242d75d7e311e1ed63d83a53c9ee 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.5E-93 T 14-10-2018 IPR014319 Phage shock protein, PspA VS_0403 820ec3f0ebed149b2c87488c7c26bee7 198 SMART SM01207 10 185 3.8E-88 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VS_0403 820ec3f0ebed149b2c87488c7c26bee7 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 195 1.5E-74 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VS_0403 820ec3f0ebed149b2c87488c7c26bee7 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 1.5E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VS_0403 820ec3f0ebed149b2c87488c7c26bee7 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.558 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VS_II0042 25a344cf6b8d280df3f790deab4f25a0 98 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 96 9.0E-29 T 14-10-2018 IPR010438 Bor GO:0009279 VS_II0042 25a344cf6b8d280df3f790deab4f25a0 98 Pfam PF06291 Bor protein 19 96 1.6E-32 T 14-10-2018 IPR010438 Bor GO:0009279 VS_II0543 156d4dbb350311625561ff357a6a7d38 148 Pfam PF04224 Protein of unknown function, DUF417 6 145 1.9E-40 T 14-10-2018 IPR007339 Inner membrane protein RclC-like VS_II0543 156d4dbb350311625561ff357a6a7d38 148 PIRSF PIRSF028065 1 148 6.7E-68 T 14-10-2018 IPR016865 Inner membrane protein RclC VS_II0308 e1a8fbbe661ea87075ccfc7a013cf643 205 PRINTS PR00160 Glutaredoxin signature 108 126 1.8E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_II0308 e1a8fbbe661ea87075ccfc7a013cf643 205 PRINTS PR00160 Glutaredoxin signature 171 184 1.8E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_II0308 e1a8fbbe661ea87075ccfc7a013cf643 205 PRINTS PR00160 Glutaredoxin signature 157 170 1.8E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup VS_II0308 e1a8fbbe661ea87075ccfc7a013cf643 205 Pfam PF00462 Glutaredoxin 109 174 2.9E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VS_II0308 e1a8fbbe661ea87075ccfc7a013cf643 205 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VS_II0308 e1a8fbbe661ea87075ccfc7a013cf643 205 Gene3D G3DSA:3.40.30.10 109 185 4.0E-19 T 14-10-2018 VS_II0308 e1a8fbbe661ea87075ccfc7a013cf643 205 SUPERFAMILY SSF52833 109 189 3.29E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II0073 31b7656db6ce5ec420be9b5b5fa5feca 332 Pfam PF00962 Adenosine/AMP deaminase 6 327 1.2E-74 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VS_II0073 31b7656db6ce5ec420be9b5b5fa5feca 332 SUPERFAMILY SSF51556 5 331 2.08E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase VS_II0073 31b7656db6ce5ec420be9b5b5fa5feca 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 326 2.2E-90 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VS_II0073 31b7656db6ce5ec420be9b5b5fa5feca 332 Gene3D G3DSA:3.20.20.140 2 332 4.8E-101 T 14-10-2018 VS_II0073 31b7656db6ce5ec420be9b5b5fa5feca 332 Hamap MF_00540 Adenosine deaminase [add]. 1 330 57.139 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 94 283 5.1E-33 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 Gene3D G3DSA:3.30.572.10 1 283 1.3E-79 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 SUPERFAMILY SSF55831 2 283 8.9E-91 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.553 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 Pfam PF00303 Thymidylate synthase 2 283 3.8E-73 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.8E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.8E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.8E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_0527 06d1c208f37c6274ef25ea3127e7a568 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.8E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VS_II0995 84aee4559ebfd024f5e5f080cecab635 145 SUPERFAMILY SSF160719 37 140 1.7E-18 T 14-10-2018 VS_II0995 84aee4559ebfd024f5e5f080cecab635 145 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 15 145 3.0E-36 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VS_II0995 84aee4559ebfd024f5e5f080cecab635 145 Gene3D G3DSA:3.10.450.40 14 121 1.9E-10 T 14-10-2018 VS_II0995 84aee4559ebfd024f5e5f080cecab635 145 Pfam PF04965 Gene 25-like lysozyme 37 123 2.1E-16 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VS_2011 80a5c2372a75c10f21b3137c8aa9dc11 284 SUPERFAMILY SSF51735 4 276 2.95E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_2011 80a5c2372a75c10f21b3137c8aa9dc11 284 Gene3D G3DSA:3.40.50.720 1 284 1.5E-41 T 14-10-2018 VS_2011 80a5c2372a75c10f21b3137c8aa9dc11 284 Pfam PF13460 NAD(P)H-binding 72 189 1.1E-10 T 14-10-2018 IPR016040 NAD(P)-binding domain VS_0029 45306453b61dca93a9a27b8ba927c150 213 PRINTS PR01021 OMPA domain signature 114 136 4.3E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_0029 45306453b61dca93a9a27b8ba927c150 213 PRINTS PR01021 OMPA domain signature 158 174 4.3E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_0029 45306453b61dca93a9a27b8ba927c150 213 PRINTS PR01021 OMPA domain signature 143 158 4.3E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_0029 45306453b61dca93a9a27b8ba927c150 213 SUPERFAMILY SSF103088 103 211 9.55E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_0029 45306453b61dca93a9a27b8ba927c150 213 Pfam PF00691 OmpA family 113 207 2.4E-17 T 14-10-2018 IPR006665 OmpA-like domain VS_0029 45306453b61dca93a9a27b8ba927c150 213 Gene3D G3DSA:3.30.1330.60 78 213 1.2E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_0232 9ac932100ba12d09598b7cc77671fc5f 282 Gene3D G3DSA:3.40.50.720 5 281 3.3E-45 T 14-10-2018 VS_0232 9ac932100ba12d09598b7cc77671fc5f 282 SUPERFAMILY SSF51735 18 278 3.96E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0232 9ac932100ba12d09598b7cc77671fc5f 282 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 193 1.3E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VS_II0555 573a59c54ca9d4124ff58a0508f359f3 206 Gene3D G3DSA:3.40.30.10 1 83 4.7E-36 T 14-10-2018 VS_II0555 573a59c54ca9d4124ff58a0508f359f3 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 2.9E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_II0555 573a59c54ca9d4124ff58a0508f359f3 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 129 191 3.7E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VS_II0555 573a59c54ca9d4124ff58a0508f359f3 206 SUPERFAMILY SSF47616 72 198 8.35E-16 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_II0555 573a59c54ca9d4124ff58a0508f359f3 206 Gene3D G3DSA:1.20.1050.10 84 198 5.6E-32 T 14-10-2018 VS_II0555 573a59c54ca9d4124ff58a0508f359f3 206 SUPERFAMILY SSF52833 1 78 9.49E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0469 62254803d7e8b306f00ca1859030e36e 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 135 1.1E-21 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VS_0469 62254803d7e8b306f00ca1859030e36e 142 PIRSF PIRSF026426 1 142 5.8E-46 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 Pfam PF02556 Preprotein translocase subunit SecB 6 145 8.1E-55 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 Gene3D G3DSA:3.10.420.10 3 155 5.3E-57 T 14-10-2018 IPR035958 SecB-like superfamily VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 SUPERFAMILY SSF54611 3 143 3.49E-52 T 14-10-2018 IPR035958 SecB-like superfamily VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 7.6E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 7.6E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 7.6E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 7.6E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.541 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VS_0206 f62be29b4cbcbf1a9d4ffe509a6410d9 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 147 7.2E-58 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VS_II0407 3ecec5befe134df8d556d72c0c54d69a 440 PIRSF PIRSF006066 12 440 6.6E-69 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_II0407 3ecec5befe134df8d556d72c0c54d69a 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 438 3.7E-86 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_II0407 3ecec5befe134df8d556d72c0c54d69a 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 17 435 3.3E-77 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VS_2491 6c8db16dccc029ac488aa25b38d2d879 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.949 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VS_2491 6c8db16dccc029ac488aa25b38d2d879 209 Gene3D G3DSA:3.40.50.150 30 209 3.5E-61 T 14-10-2018 VS_2491 6c8db16dccc029ac488aa25b38d2d879 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 2.3E-57 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VS_2491 6c8db16dccc029ac488aa25b38d2d879 209 SUPERFAMILY SSF53335 30 209 3.03E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2491 6c8db16dccc029ac488aa25b38d2d879 209 PIRSF PIRSF005461 1 209 5.1E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 SMART SM00487 24 227 3.1E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 Gene3D G3DSA:3.40.50.300 2 216 7.3E-72 T 14-10-2018 VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 1.1E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 SUPERFAMILY SSF52540 77 363 6.57E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 SMART SM00490 264 345 1.9E-33 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 Pfam PF00271 Helicase conserved C-terminal domain 240 345 1.0E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VS_II0200 bfddc9aedf28754559b6dfa765f9f9c8 447 Gene3D G3DSA:3.40.50.300 218 429 1.2E-51 T 14-10-2018 VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 Pfam PF00664 ABC transporter transmembrane region 158 417 2.3E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 Gene3D G3DSA:3.40.50.300 462 703 1.6E-73 T 14-10-2018 VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 Gene3D G3DSA:1.20.1560.10 141 454 2.3E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 SMART SM00382 495 681 6.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 SUPERFAMILY SSF52540 459 693 2.07E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 7.0E-293 T 14-10-2018 IPR017750 ATPase, type I secretion system VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 Gene3D G3DSA:3.90.70.10 1 126 4.1E-37 T 14-10-2018 VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 Pfam PF00005 ABC transporter 487 635 5.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II0005 cc009dd0561c94c4ce272a855b48e5bd 704 SUPERFAMILY SSF90123 136 452 1.83E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II1442 00baef31d800e2e183e30fad9fe70da7 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.817 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VS_II1442 00baef31d800e2e183e30fad9fe70da7 408 Pfam PF03616 Sodium/glutamate symporter 6 376 1.1E-150 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VS_II1442 00baef31d800e2e183e30fad9fe70da7 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 407 2.0E-133 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VS_1450 dc3859963b5d17cf2e510e502d3665f1 142 Pfam PF01381 Helix-turn-helix 25 79 6.0E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_1450 dc3859963b5d17cf2e510e502d3665f1 142 SMART SM00530 24 79 2.3E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VS_1450 dc3859963b5d17cf2e510e502d3665f1 142 SUPERFAMILY SSF47413 18 80 1.31E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VS_1450 dc3859963b5d17cf2e510e502d3665f1 142 Gene3D G3DSA:1.10.260.40 18 99 3.9E-17 T 14-10-2018 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 4.3E-75 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 628 3.6E-187 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 188 203 2.3E-8 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 312 327 2.3E-8 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.3E-8 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 112 135 2.3E-8 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 350 367 2.3E-8 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 618 631 2.3E-8 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VS_1928 609a237a46e209e0984bbab8dad45e95 640 Pfam PF01578 Cytochrome C assembly protein 89 294 3.4E-42 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VS_1928 609a237a46e209e0984bbab8dad45e95 640 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 625 5.5E-65 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VS_II0599 ac0316eace5a59c274b836a44427c3f1 101 Pfam PF03927 NapD protein 6 80 7.9E-28 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VS_II0599 ac0316eace5a59c274b836a44427c3f1 101 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.066 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VS_II0599 ac0316eace5a59c274b836a44427c3f1 101 Gene3D G3DSA:3.30.70.920 6 75 3.2E-22 T 14-10-2018 VS_1511 11c77a323f95e970bc068839e8d26284 161 Pfam PF00877 NlpC/P60 family 56 160 1.0E-28 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VS_1511 11c77a323f95e970bc068839e8d26284 161 Gene3D G3DSA:3.90.1720.10 40 161 5.6E-38 T 14-10-2018 VS_1511 11c77a323f95e970bc068839e8d26284 161 SUPERFAMILY SSF54001 40 161 1.01E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VS_II1368 6fd71d32010b704b1a5a805f27f33edc 280 Gene3D G3DSA:2.60.120.10 2 93 4.2E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1368 6fd71d32010b704b1a5a805f27f33edc 280 Gene3D G3DSA:1.10.10.60 169 279 1.5E-21 T 14-10-2018 VS_II1368 6fd71d32010b704b1a5a805f27f33edc 280 SUPERFAMILY SSF46689 229 275 1.16E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1368 6fd71d32010b704b1a5a805f27f33edc 280 SUPERFAMILY SSF51215 23 158 7.85E-8 T 14-10-2018 IPR037923 Transcription regulator HTH-like VS_II1368 6fd71d32010b704b1a5a805f27f33edc 280 SMART SM00342 189 272 7.1E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_II1368 6fd71d32010b704b1a5a805f27f33edc 280 Pfam PF12833 Helix-turn-helix domain 195 274 4.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VS_1637 2ff4842b6e833129707718444fa7f075 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 143 2.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_1637 2ff4842b6e833129707718444fa7f075 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 123 2.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_1637 2ff4842b6e833129707718444fa7f075 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_1637 2ff4842b6e833129707718444fa7f075 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 157 177 2.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_1637 2ff4842b6e833129707718444fa7f075 181 Pfam PF01047 MarR family 75 131 2.2E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_1637 2ff4842b6e833129707718444fa7f075 181 Gene3D G3DSA:1.10.10.10 38 179 4.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1637 2ff4842b6e833129707718444fa7f075 181 SUPERFAMILY SSF46785 45 180 3.7E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1637 2ff4842b6e833129707718444fa7f075 181 SMART SM00347 67 167 1.4E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_1632 75a6d938291f0da6eb9ad1023297b52b 247 SUPERFAMILY SSF53335 6 246 1.15E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1632 75a6d938291f0da6eb9ad1023297b52b 247 Pfam PF13649 Methyltransferase domain 45 135 2.8E-12 T 14-10-2018 VS_1632 75a6d938291f0da6eb9ad1023297b52b 247 Gene3D G3DSA:3.40.50.150 13 214 1.4E-37 T 14-10-2018 VS_1632 75a6d938291f0da6eb9ad1023297b52b 247 Gene3D G3DSA:2.20.130.10 147 206 1.4E-37 T 14-10-2018 VS_3138 01a72a84f4f1cad7eccc9df4e3069b70 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VS_3138 01a72a84f4f1cad7eccc9df4e3069b70 472 Gene3D G3DSA:2.60.40.10 357 472 2.7E-43 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_3138 01a72a84f4f1cad7eccc9df4e3069b70 472 Pfam PF12801 4Fe-4S binding domain 97 136 1.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_3138 01a72a84f4f1cad7eccc9df4e3069b70 472 Pfam PF13746 4Fe-4S dicluster domain 222 326 2.1E-41 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VS_3138 01a72a84f4f1cad7eccc9df4e3069b70 472 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 470 1.1E-168 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 VS_3138 01a72a84f4f1cad7eccc9df4e3069b70 472 SUPERFAMILY SSF54862 107 335 2.75E-31 T 14-10-2018 VS_3138 01a72a84f4f1cad7eccc9df4e3069b70 472 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 469 2.3E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VS_II1178 5edd3e629311be53e82ab1c7348fa7ac 239 SUPERFAMILY SSF52833 70 236 1.46E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II1178 5edd3e629311be53e82ab1c7348fa7ac 239 Gene3D G3DSA:3.40.30.10 68 239 3.0E-33 T 14-10-2018 VS_II1178 5edd3e629311be53e82ab1c7348fa7ac 239 Pfam PF13462 Thioredoxin 76 237 1.4E-20 T 14-10-2018 IPR012336 Thioredoxin-like fold VS_3001 df9021c4c9bc630be8ced299e1965038 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 116 2.0E-50 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VS_3001 df9021c4c9bc630be8ced299e1965038 123 Pfam PF07226 Protein of unknown function (DUF1422) 10 119 1.8E-46 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VS_II0309 06268116c028ce3b7a0d0c1c6e8941e9 296 SUPERFAMILY SSF103481 46 144 6.8E-9 T 14-10-2018 VS_II0309 06268116c028ce3b7a0d0c1c6e8941e9 296 SUPERFAMILY SSF103481 188 286 6.67E-10 T 14-10-2018 VS_II0309 06268116c028ce3b7a0d0c1c6e8941e9 296 Pfam PF00892 EamA-like transporter family 152 283 2.3E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0309 06268116c028ce3b7a0d0c1c6e8941e9 296 Pfam PF00892 EamA-like transporter family 9 143 8.6E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.2E-67 T 14-10-2018 VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 SUPERFAMILY SSF51735 5 244 4.97E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 4.6E-100 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 Gene3D G3DSA:3.40.50.720 1 245 1.7E-89 T 14-10-2018 VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.1E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.1E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.1E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 2.7E-6 T 14-10-2018 VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.2E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.2E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.2E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.2E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.2E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1024 bb24c40b0f27866bd26069ee7e06781e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.2E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_2371 438247ea7df50c8b59b1534f7030f54a 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 3.1E-21 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.1E-36 T 14-10-2018 IPR003004 GspF/PilC family VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.1E-36 T 14-10-2018 IPR003004 GspF/PilC family VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.1E-36 T 14-10-2018 IPR003004 GspF/PilC family VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.1E-36 T 14-10-2018 IPR003004 GspF/PilC family VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 1.3E-156 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 Gene3D G3DSA:1.20.81.30 257 369 1.1E-26 T 14-10-2018 VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 3.5E-33 T 14-10-2018 IPR018076 Type II secretion system F domain VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 2.9E-25 T 14-10-2018 IPR018076 Type II secretion system F domain VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VS_0137 ad33095ccfba03dcaad3ad3ece041b23 406 Gene3D G3DSA:1.20.81.30 56 173 4.5E-37 T 14-10-2018 VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 478 7.6E-35 T 14-10-2018 IPR000160 GGDEF domain VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 SUPERFAMILY SSF55073 327 481 6.98E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 Pfam PF08269 Cache domain 32 282 6.1E-20 T 14-10-2018 IPR004010 Double Cache domain 2 VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 SMART SM00267 312 479 2.7E-39 T 14-10-2018 IPR000160 GGDEF domain VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 Gene3D G3DSA:3.30.450.20 182 294 1.8E-9 T 14-10-2018 VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 Gene3D G3DSA:3.30.450.20 58 181 2.3E-5 T 14-10-2018 VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 475 6.5E-35 T 14-10-2018 IPR000160 GGDEF domain VS_II0547 5418c4cbcfcdc1b82f9e64175a7a4ea8 489 Gene3D G3DSA:3.30.70.270 321 487 5.1E-42 T 14-10-2018 VS_1904 60683fe14031dc78c65055b98c2e760a 423 SUPERFAMILY SSF101960 23 417 2.88E-93 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily VS_1904 60683fe14031dc78c65055b98c2e760a 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 169 391 1.8E-61 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 VS_1904 60683fe14031dc78c65055b98c2e760a 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 134 406 5.7E-73 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 VS_0549 eb3976bf6e89bd093b49e5736208f42e 336 Gene3D G3DSA:2.70.70.10 127 277 6.8E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_0549 eb3976bf6e89bd093b49e5736208f42e 336 SUPERFAMILY SSF51261 103 273 6.8E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif VS_0549 eb3976bf6e89bd093b49e5736208f42e 336 Pfam PF01551 Peptidase family M23 176 271 4.8E-29 T 14-10-2018 IPR016047 Peptidase M23 VS_0008 1d02e17d3200b7f59b8f1582fd842852 223 SUPERFAMILY SSF161098 13 203 3.27E-43 T 14-10-2018 IPR035906 MetI-like superfamily VS_0008 1d02e17d3200b7f59b8f1582fd842852 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 8.5E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_0008 1d02e17d3200b7f59b8f1582fd842852 223 Gene3D G3DSA:1.10.3720.10 1 222 3.1E-52 T 14-10-2018 IPR035906 MetI-like superfamily VS_0008 1d02e17d3200b7f59b8f1582fd842852 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 211 6.8E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_3125 60a1a8a2abd51a725bf2565af673e06a 363 SUPERFAMILY SSF54106 37 84 2.49E-6 T 14-10-2018 VS_3125 60a1a8a2abd51a725bf2565af673e06a 363 Gene3D G3DSA:3.10.350.10 36 83 1.6E-13 T 14-10-2018 IPR036779 LysM domain superfamily VS_3125 60a1a8a2abd51a725bf2565af673e06a 363 SMART SM00257 37 85 8.9E-4 T 14-10-2018 IPR018392 LysM domain VS_3125 60a1a8a2abd51a725bf2565af673e06a 363 Pfam PF01476 LysM domain 38 83 5.2E-12 T 14-10-2018 IPR018392 LysM domain VS_0995 1519aea252a34746e0bcd368fdae8500 315 SUPERFAMILY SSF52833 31 150 1.08E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0995 1519aea252a34746e0bcd368fdae8500 315 SUPERFAMILY SSF47616 166 312 3.06E-34 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_0995 1519aea252a34746e0bcd368fdae8500 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 191 249 5.1E-12 T 14-10-2018 VS_0995 1519aea252a34746e0bcd368fdae8500 315 PIRSF PIRSF015753 4 312 3.8E-133 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VS_0995 1519aea252a34746e0bcd368fdae8500 315 Gene3D G3DSA:3.40.30.130 1 168 1.8E-64 T 14-10-2018 VS_0995 1519aea252a34746e0bcd368fdae8500 315 Gene3D G3DSA:1.20.1050.10 169 315 1.9E-68 T 14-10-2018 VS_0995 1519aea252a34746e0bcd368fdae8500 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 3.3E-23 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_1149 f457128e72e128724ae83dd21c7540a9 206 Pfam PF04279 Intracellular septation protein A 1 174 9.8E-68 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VS_1149 f457128e72e128724ae83dd21c7540a9 206 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 6.1E-66 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VS_1149 f457128e72e128724ae83dd21c7540a9 206 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.719 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 267 614 2.9E-119 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 137 263 2.2E-17 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 Gene3D G3DSA:3.20.20.80 266 643 2.9E-133 T 14-10-2018 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 Gene3D G3DSA:3.30.379.10 131 265 2.1E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 SUPERFAMILY SSF55545 130 266 1.32E-20 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 360 377 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 431 444 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 578 594 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 409 427 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 261 278 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 290 311 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 225 245 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 PRINTS PR00738 Glycosyl hydrolase family 20 signature 596 613 1.2E-47 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VS_2513 0a78e2595d6de32eaab8a3934db801ea 648 SUPERFAMILY SSF51445 267 627 3.37E-125 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_2487 355642e832c20537ee514d9dc7e4bb92 124 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 17 87 5.2E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VS_2487 355642e832c20537ee514d9dc7e4bb92 124 PRINTS PR01651 Protein-export SecG membrane protein signature 17 37 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VS_2487 355642e832c20537ee514d9dc7e4bb92 124 PRINTS PR01651 Protein-export SecG membrane protein signature 52 68 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VS_2487 355642e832c20537ee514d9dc7e4bb92 124 PRINTS PR01651 Protein-export SecG membrane protein signature 37 51 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VS_2487 355642e832c20537ee514d9dc7e4bb92 124 PRINTS PR01651 Protein-export SecG membrane protein signature 68 90 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VS_2487 355642e832c20537ee514d9dc7e4bb92 124 Pfam PF03840 Preprotein translocase SecG subunit 18 86 5.1E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VS_II0001 add5935ab2efee957f336abc92fb14ac 405 Gene3D G3DSA:3.40.50.300 109 397 1.5E-55 T 14-10-2018 VS_II0001 add5935ab2efee957f336abc92fb14ac 405 SUPERFAMILY SSF52540 108 368 3.12E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0001 add5935ab2efee957f336abc92fb14ac 405 Gene3D G3DSA:1.10.1660.30 36 103 4.7E-5 T 14-10-2018 VS_II0001 add5935ab2efee957f336abc92fb14ac 405 Pfam PF13614 AAA domain 110 295 8.0E-22 T 14-10-2018 IPR025669 AAA domain VS_2193 4288990f76021add2117a28ade29f6b0 410 Gene3D G3DSA:3.90.1150.10 21 398 5.6E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_2193 4288990f76021add2117a28ade29f6b0 410 Gene3D G3DSA:3.40.640.10 53 294 5.6E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_2193 4288990f76021add2117a28ade29f6b0 410 SUPERFAMILY SSF53383 6 400 1.32E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_2193 4288990f76021add2117a28ade29f6b0 410 Pfam PF00155 Aminotransferase class I and II 61 392 5.1E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_II1086 b7a366d134434b456d0cd0600fb2b5bf 222 Pfam PF03070 TENA/THI-4/PQQC family 9 217 1.5E-43 T 14-10-2018 IPR004305 Thiaminase-2/PQQC VS_II1086 b7a366d134434b456d0cd0600fb2b5bf 222 SUPERFAMILY SSF48613 3 216 8.34E-66 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VS_II1086 b7a366d134434b456d0cd0600fb2b5bf 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 216 4.7E-41 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 VS_II1086 b7a366d134434b456d0cd0600fb2b5bf 222 Gene3D G3DSA:1.20.910.10 2 221 5.8E-62 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VS_2369 4faecc4a8d19667f334af1f9a5287330 229 SUPERFAMILY SSF158682 85 227 3.79E-24 T 14-10-2018 IPR029024 TerB-like VS_2369 4faecc4a8d19667f334af1f9a5287330 229 Gene3D G3DSA:1.10.3680.10 105 229 1.0E-9 T 14-10-2018 IPR029024 TerB-like VS_2369 4faecc4a8d19667f334af1f9a5287330 229 Pfam PF04391 Protein of unknown function (DUF533) 51 227 6.9E-61 T 14-10-2018 IPR007486 Inner membrane protein YebE VS_II0021 2735271581a34dcfb686da9d83081e4c 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 491 1.1E-214 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 VS_II0021 2735271581a34dcfb686da9d83081e4c 497 Gene3D G3DSA:1.20.1730.10 8 496 2.1E-99 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VS_II0021 2735271581a34dcfb686da9d83081e4c 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 7.0E-96 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VS_II0021 2735271581a34dcfb686da9d83081e4c 497 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site VS_II0021 2735271581a34dcfb686da9d83081e4c 497 Pfam PF00474 Sodium:solute symporter family 36 437 1.9E-106 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 Gene3D G3DSA:3.40.1690.10 218 358 7.3E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.1E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.1E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.1E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.1E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.1E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 SUPERFAMILY SSF160544 250 355 1.27E-39 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.6E-135 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VS_0836 97171d843bdf1fa83e5bd17429be5d0f 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 9.6E-122 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VS_0719 7a8bdc8184d860347ab62d4d49967a02 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 2.0E-49 T 14-10-2018 IPR009912 Zinc-ribbon containing domain VS_1051 b7605f3e4ed1a6b4ca504d878bc01ced 338 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 33 335 1.1E-81 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 VS_1051 b7605f3e4ed1a6b4ca504d878bc01ced 338 Gene3D G3DSA:2.40.128.140 27 336 6.2E-50 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily VS_1019 069e5ba32c527ca0fc7e0feaa23e0192 175 Pfam PF02620 Uncharacterized ACR, COG1399 62 174 2.5E-18 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VS_1110 ce5d1082ca98e7b329705a68e3ab2e36 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.1E-163 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VS_1110 ce5d1082ca98e7b329705a68e3ab2e36 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 4.8E-105 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VS_1110 ce5d1082ca98e7b329705a68e3ab2e36 378 PIRSF PIRSF000267 2 376 1.8E-121 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VS_2345 ece4f98b95352b388bf574420b6955ae 452 Pfam PF02163 Peptidase family M50 11 440 1.7E-86 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VS_2345 ece4f98b95352b388bf574420b6955ae 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 2.9E-136 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VS_2345 ece4f98b95352b388bf574420b6955ae 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 224 276 2.4E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_2345 ece4f98b95352b388bf574420b6955ae 452 SUPERFAMILY SSF50156 196 291 5.13E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VS_2345 ece4f98b95352b388bf574420b6955ae 452 Gene3D G3DSA:2.30.42.10 126 221 3.0E-32 T 14-10-2018 VS_2345 ece4f98b95352b388bf574420b6955ae 452 Gene3D G3DSA:2.30.42.10 222 311 9.7E-19 T 14-10-2018 VS_2345 ece4f98b95352b388bf574420b6955ae 452 SUPERFAMILY SSF50156 90 185 2.1E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VS_2345 ece4f98b95352b388bf574420b6955ae 452 SMART SM00228 115 186 0.45 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_2345 ece4f98b95352b388bf574420b6955ae 452 SMART SM00228 212 281 3.4E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VS_II0558 fd5dba65573dd24fbff894e4ad90f51d 157 SUPERFAMILY SSF54534 13 157 1.85E-51 T 14-10-2018 VS_II0558 fd5dba65573dd24fbff894e4ad90f51d 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 7.9E-28 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VS_II0558 fd5dba65573dd24fbff894e4ad90f51d 157 Gene3D G3DSA:3.10.50.40 21 157 1.2E-53 T 14-10-2018 VS_II0558 fd5dba65573dd24fbff894e4ad90f51d 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 26 59 4.4E-9 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VS_0343 58f504f466006fdc603bc17ad4abf51f 162 Pfam PF04093 rod shape-determining protein MreD 9 154 3.8E-37 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VS_0343 58f504f466006fdc603bc17ad4abf51f 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 3.6E-37 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VS_0343 58f504f466006fdc603bc17ad4abf51f 162 PIRSF PIRSF018472 1 162 7.0E-41 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VS_1284 a68928791845d5e9f49dcbde4b146249 272 Pfam PF01925 Sulfite exporter TauE/SafE 15 269 2.4E-51 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 Gene3D G3DSA:3.40.50.2300 183 311 1.2E-21 T 14-10-2018 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 SMART SM00260 17 158 3.6E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 PIRSF PIRSF002867 1 312 8.0E-104 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 Pfam PF01584 CheW-like domain 21 160 1.7E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 Pfam PF00072 Response regulator receiver domain 186 303 5.7E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 SUPERFAMILY SSF52172 183 310 3.27E-21 T 14-10-2018 IPR011006 CheY-like superfamily VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 SUPERFAMILY SSF50341 16 161 4.71E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 Gene3D G3DSA:2.40.50.180 39 158 5.5E-29 T 14-10-2018 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 Gene3D G3DSA:2.30.30.40 24 152 5.5E-29 T 14-10-2018 VS_1039 6689f8f4c9868a89b3e3e4870f18fb3b 313 SMART SM00448 184 305 1.9E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1859 423f044cf2eeb43d6ef45dd01aa5e1ba 435 Pfam PF09335 SNARE associated Golgi protein 23 136 1.1E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein VS_1859 423f044cf2eeb43d6ef45dd01aa5e1ba 435 Pfam PF14067 LssY C-terminus 246 413 5.6E-42 T 14-10-2018 IPR025902 LssY-like C-terminal domain VS_1517 de6ddb5ffdb5e04e50d41264c4364437 456 PIRSF PIRSF006603 5 453 1.1E-58 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1517 de6ddb5ffdb5e04e50d41264c4364437 456 Pfam PF01554 MatE 243 404 2.1E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1517 de6ddb5ffdb5e04e50d41264c4364437 456 Pfam PF01554 MatE 17 176 3.0E-32 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1517 de6ddb5ffdb5e04e50d41264c4364437 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 1.1E-114 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1396 baf20b864a3d7d212d23350a036c04bc 467 SUPERFAMILY SSF58104 157 466 7.59E-67 T 14-10-2018 VS_1396 baf20b864a3d7d212d23350a036c04bc 467 Gene3D G3DSA:1.10.287.950 139 466 6.2E-64 T 14-10-2018 VS_1396 baf20b864a3d7d212d23350a036c04bc 467 SMART SM00283 205 466 1.3E-61 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1396 baf20b864a3d7d212d23350a036c04bc 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 254 432 6.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VS_1523 126ad3358e8127428208f2aba3d82a8d 330 Gene3D G3DSA:3.40.190.100 111 247 5.2E-36 T 14-10-2018 VS_1523 126ad3358e8127428208f2aba3d82a8d 330 Gene3D G3DSA:3.40.190.10 27 318 5.2E-36 T 14-10-2018 VS_1523 126ad3358e8127428208f2aba3d82a8d 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 309 4.9E-60 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VS_1523 126ad3358e8127428208f2aba3d82a8d 330 SUPERFAMILY SSF53850 20 325 1.47E-66 T 14-10-2018 VS_2826 afe57ffd2e4fa650905f4ed8c6dcdf11 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 2.9E-49 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2826 afe57ffd2e4fa650905f4ed8c6dcdf11 111 Gene3D G3DSA:3.90.470.10 1 111 4.6E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VS_2826 afe57ffd2e4fa650905f4ed8c6dcdf11 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 111 29.523 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_2826 afe57ffd2e4fa650905f4ed8c6dcdf11 111 SUPERFAMILY SSF54843 2 110 1.01E-44 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VS_2826 afe57ffd2e4fa650905f4ed8c6dcdf11 111 Pfam PF00237 Ribosomal protein L22p/L17e 6 108 2.3E-39 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VS_2826 afe57ffd2e4fa650905f4ed8c6dcdf11 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_1997 e97134eeeed569fc5a1e92c555a28c68 260 SMART SM00382 38 227 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_1997 e97134eeeed569fc5a1e92c555a28c68 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_1997 e97134eeeed569fc5a1e92c555a28c68 260 Gene3D G3DSA:3.40.50.300 1 259 1.5E-69 T 14-10-2018 VS_1997 e97134eeeed569fc5a1e92c555a28c68 260 Pfam PF00005 ABC transporter 30 178 2.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_1997 e97134eeeed569fc5a1e92c555a28c68 260 SUPERFAMILY SSF52540 3 252 2.3E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2384 b6ce79171bc84615dbf4781f12ea5e83 269 Pfam PF03180 NLPA lipoprotein 33 269 5.2E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family VS_2384 b6ce79171bc84615dbf4781f12ea5e83 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 6.1E-126 T 14-10-2018 IPR004872 Lipoprotein NlpA family VS_2384 b6ce79171bc84615dbf4781f12ea5e83 269 PIRSF PIRSF002854 1 269 1.1E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family VS_2384 b6ce79171bc84615dbf4781f12ea5e83 269 Gene3D G3DSA:3.40.190.10 34 263 1.5E-93 T 14-10-2018 VS_2384 b6ce79171bc84615dbf4781f12ea5e83 269 Gene3D G3DSA:3.40.190.10 115 219 1.5E-93 T 14-10-2018 VS_2384 b6ce79171bc84615dbf4781f12ea5e83 269 SUPERFAMILY SSF53850 32 269 1.58E-80 T 14-10-2018 VS_1140 5ee912d393bc8c91a8afccafe09036ce 154 Pfam PF04138 GtrA-like protein 30 152 8.3E-22 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 VS_II1041 c26fdc40fc64a1c86f78167c07b61e9f 303 Pfam PF04116 Fatty acid hydroxylase superfamily 106 239 6.2E-27 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VS_0276 ff036588869965b55fede54e3710d474 211 SMART SM00671 108 143 8.1E-6 T 14-10-2018 IPR006597 Sel1-like repeat VS_0276 ff036588869965b55fede54e3710d474 211 SMART SM00671 72 107 0.0027 T 14-10-2018 IPR006597 Sel1-like repeat VS_0276 ff036588869965b55fede54e3710d474 211 SMART SM00671 144 179 31.0 T 14-10-2018 IPR006597 Sel1-like repeat VS_0276 ff036588869965b55fede54e3710d474 211 Gene3D G3DSA:1.25.40.10 43 208 3.4E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0276 ff036588869965b55fede54e3710d474 211 SUPERFAMILY SSF81901 65 177 3.79E-21 T 14-10-2018 VS_0276 ff036588869965b55fede54e3710d474 211 Pfam PF08238 Sel1 repeat 76 106 0.0085 T 14-10-2018 IPR006597 Sel1-like repeat VS_0276 ff036588869965b55fede54e3710d474 211 Pfam PF08238 Sel1 repeat 108 143 2.6E-5 T 14-10-2018 IPR006597 Sel1-like repeat VS_II1317 ddd431deaf8e50e4751432d203b1cedb 100 SUPERFAMILY SSF52794 2 94 1.05E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VS_II1317 ddd431deaf8e50e4751432d203b1cedb 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 79 1.2E-28 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VS_II1317 ddd431deaf8e50e4751432d203b1cedb 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 93 5.5E-13 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VS_II1317 ddd431deaf8e50e4751432d203b1cedb 100 Gene3D G3DSA:3.40.50.2300 1 100 3.5E-33 T 14-10-2018 VS_3148 5b031641590c5065edf1010e7393af55 304 SUPERFAMILY SSF53850 89 290 1.93E-24 T 14-10-2018 VS_3148 5b031641590c5065edf1010e7393af55 304 SUPERFAMILY SSF46785 5 86 4.14E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_3148 5b031641590c5065edf1010e7393af55 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_3148 5b031641590c5065edf1010e7393af55 304 Gene3D G3DSA:1.10.10.10 1 90 2.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_3148 5b031641590c5065edf1010e7393af55 304 Gene3D G3DSA:3.40.190.290 93 299 1.6E-15 T 14-10-2018 VS_3148 5b031641590c5065edf1010e7393af55 304 Pfam PF03466 LysR substrate binding domain 89 288 8.7E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2045 4926ec750817e7a95fe04743f816bd8a 199 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 4 197 31.012 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VS_2045 4926ec750817e7a95fe04743f816bd8a 199 Gene3D G3DSA:2.50.20.10 17 198 9.5E-45 T 14-10-2018 VS_2045 4926ec750817e7a95fe04743f816bd8a 199 SUPERFAMILY SSF89392 21 198 4.32E-49 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VS_2045 4926ec750817e7a95fe04743f816bd8a 199 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 6 198 1.7E-61 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VS_2045 4926ec750817e7a95fe04743f816bd8a 199 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 31 186 1.2E-54 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VS_2304 844676008bee8b1aa60e7fddce98a4fa 348 Gene3D G3DSA:3.30.310.170 220 346 1.3E-39 T 14-10-2018 VS_2304 844676008bee8b1aa60e7fddce98a4fa 348 Pfam PF06804 NlpB/DapX lipoprotein 35 335 3.7E-102 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein VS_2304 844676008bee8b1aa60e7fddce98a4fa 348 Gene3D G3DSA:3.30.530.50 96 205 2.4E-13 T 14-10-2018 VS_2304 844676008bee8b1aa60e7fddce98a4fa 348 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 33.26 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VS_2304 844676008bee8b1aa60e7fddce98a4fa 348 PIRSF PIRSF026343 4 339 4.5E-123 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VS_0253 6d4c2b2c95fd9bbc2c8b99f694a28bd0 303 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 2.0E-63 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VS_0253 6d4c2b2c95fd9bbc2c8b99f694a28bd0 303 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 3.9E-85 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VS_0253 6d4c2b2c95fd9bbc2c8b99f694a28bd0 303 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 48.783 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VS_II1525 6cd6a25d592bae34752dcbc9b0359834 252 Gene3D G3DSA:3.40.190.10 111 213 4.0E-17 T 14-10-2018 VS_II1525 6cd6a25d592bae34752dcbc9b0359834 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 252 4.5E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VS_II1525 6cd6a25d592bae34752dcbc9b0359834 252 Gene3D G3DSA:3.40.190.10 34 251 4.0E-17 T 14-10-2018 VS_II1525 6cd6a25d592bae34752dcbc9b0359834 252 SUPERFAMILY SSF53850 32 252 6.95E-24 T 14-10-2018 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 PRINTS PR00166 Aromatic amino acid permease signature 35 54 4.3E-26 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 PRINTS PR00166 Aromatic amino acid permease signature 325 344 4.3E-26 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 PRINTS PR00166 Aromatic amino acid permease signature 145 165 4.3E-26 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 PRINTS PR00166 Aromatic amino acid permease signature 304 322 4.3E-26 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 PRINTS PR00166 Aromatic amino acid permease signature 180 202 4.3E-26 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 PRINTS PR00166 Aromatic amino acid permease signature 8 31 4.3E-26 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 PRINTS PR00166 Aromatic amino acid permease signature 80 100 4.3E-26 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 Gene3D G3DSA:1.20.1740.10 1 386 1.8E-6 T 14-10-2018 VS_II1309 f52209a34512369ded93dcfdec9ff3f0 387 Pfam PF03222 Tryptophan/tyrosine permease family 2 381 5.9E-68 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VS_1846 578a2279827e30c84d03173787fc57ff 382 SUPERFAMILY SSF159245 64 382 2.22E-96 T 14-10-2018 VS_1846 578a2279827e30c84d03173787fc57ff 382 Gene3D G3DSA:2.40.370.10 261 382 1.0E-23 T 14-10-2018 IPR023374 AttH-like domain superfamily VS_1846 578a2279827e30c84d03173787fc57ff 382 Gene3D G3DSA:2.40.370.10 75 259 6.7E-54 T 14-10-2018 IPR023374 AttH-like domain superfamily VS_1846 578a2279827e30c84d03173787fc57ff 382 Pfam PF17186 Lipocalin-like domain 261 382 6.8E-33 T 14-10-2018 VS_1846 578a2279827e30c84d03173787fc57ff 382 Pfam PF07143 CrtC N-terminal lipocalin domain 87 256 5.3E-45 T 14-10-2018 IPR010791 AttH domain VS_II1352 10ed88b095caa9edfacea7606909aa91 175 Gene3D G3DSA:3.40.630.30 1 173 2.8E-25 T 14-10-2018 VS_II1352 10ed88b095caa9edfacea7606909aa91 175 Pfam PF00583 Acetyltransferase (GNAT) family 75 148 9.8E-12 T 14-10-2018 IPR000182 GNAT domain VS_II1352 10ed88b095caa9edfacea7606909aa91 175 SUPERFAMILY SSF55729 1 174 4.36E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2124 795f3cf7bac631f5f4282403e8118931 150 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 50 142 1.4E-43 T 14-10-2018 IPR012997 Rare lipoprotein A VS_2124 795f3cf7bac631f5f4282403e8118931 150 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 32 140 22.497 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VS_2124 795f3cf7bac631f5f4282403e8118931 150 Gene3D G3DSA:2.40.40.10 49 141 9.3E-42 T 14-10-2018 IPR036908 RlpA-like domain superfamily VS_2124 795f3cf7bac631f5f4282403e8118931 150 SUPERFAMILY SSF50685 52 141 2.34E-18 T 14-10-2018 IPR036908 RlpA-like domain superfamily VS_2124 795f3cf7bac631f5f4282403e8118931 150 Pfam PF03330 Lytic transglycolase 49 137 7.9E-30 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VS_1990 1abd1084af7eab9fa6d94be38e64b391 79 Pfam PF06667 Phage shock protein B 6 76 9.7E-34 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VS_1990 1abd1084af7eab9fa6d94be38e64b391 79 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 3 76 9.9E-33 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VS_2360 09036132828ae9c95f417027dfb41a28 102 Pfam PF11743 Protein of unknown function (DUF3301) 6 99 1.7E-30 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 VS_II0891 1d0b102d41fa3b6e22da360fece02927 341 Gene3D G3DSA:3.30.70.270 199 326 4.7E-11 T 14-10-2018 VS_II0891 1d0b102d41fa3b6e22da360fece02927 341 SUPERFAMILY SSF55073 209 315 2.43E-11 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0891 1d0b102d41fa3b6e22da360fece02927 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 290 1.2E-10 T 14-10-2018 IPR000160 GGDEF domain VS_II1223 a5fd316bd75c9d3f1039f76a79226a20 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 2.1E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_II1223 a5fd316bd75c9d3f1039f76a79226a20 210 Gene3D G3DSA:3.40.30.10 8 84 1.3E-25 T 14-10-2018 VS_II1223 a5fd316bd75c9d3f1039f76a79226a20 210 SUPERFAMILY SSF47616 78 209 3.26E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VS_II1223 a5fd316bd75c9d3f1039f76a79226a20 210 Gene3D G3DSA:1.20.1050.10 91 210 1.8E-16 T 14-10-2018 VS_II1223 a5fd316bd75c9d3f1039f76a79226a20 210 SUPERFAMILY SSF52833 1 70 2.53E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II1223 a5fd316bd75c9d3f1039f76a79226a20 210 Pfam PF04399 Glutaredoxin 2, C terminal domain 89 209 2.6E-28 T 14-10-2018 IPR007494 Glutaredoxin 2, C-terminal VS_II1223 a5fd316bd75c9d3f1039f76a79226a20 210 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 209 5.3E-56 T 14-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 VS_2781 b22bfd19c060159a2ab237ca6cef790c 274 Pfam PF10986 Protein of unknown function (DUF2796) 182 268 8.3E-15 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VS_2781 b22bfd19c060159a2ab237ca6cef790c 274 Pfam PF10986 Protein of unknown function (DUF2796) 28 149 7.7E-27 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 Gene3D G3DSA:1.25.40.10 65 234 6.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 SMART SM00028 288 321 0.005 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 SMART SM00028 328 361 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 SMART SM00028 82 115 0.29 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 SMART SM00028 248 281 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 Gene3D G3DSA:1.25.40.10 242 483 2.9E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 SUPERFAMILY SSF48452 174 359 2.0E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_2391 c1cdd84c8ac8643d0892828d69e501b1 752 SUPERFAMILY SSF48452 328 433 8.73E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II0971 4914b5699f0cc621cd51f6d6f6b4fd18 268 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 48 107 3.5E-14 T 14-10-2018 IPR032871 AHH domain-containing protein VS_II0679 34cce10b23cac9fa970fbf0b876cce16 458 PIRSF PIRSF037714 1 454 1.6E-150 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VS_II0679 34cce10b23cac9fa970fbf0b876cce16 458 Pfam PF01618 MotA/TolQ/ExbB proton channel family 311 430 5.8E-31 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VS_2200 f8e0850b32250a6b373eaab9d662b89e 621 Gene3D G3DSA:1.10.4030.30 39 196 3.6E-14 T 14-10-2018 VS_2200 f8e0850b32250a6b373eaab9d662b89e 621 Pfam PF13616 PPIC-type PPIASE domain 262 362 3.2E-25 T 14-10-2018 VS_2200 f8e0850b32250a6b373eaab9d662b89e 621 Pfam PF13624 SurA N-terminal domain 1 165 9.0E-50 T 14-10-2018 VS_2200 f8e0850b32250a6b373eaab9d662b89e 621 SUPERFAMILY SSF109998 39 244 3.4E-35 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VS_2200 f8e0850b32250a6b373eaab9d662b89e 621 SUPERFAMILY SSF54534 225 361 3.6E-29 T 14-10-2018 VS_2200 f8e0850b32250a6b373eaab9d662b89e 621 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VS_2200 f8e0850b32250a6b373eaab9d662b89e 621 Gene3D G3DSA:3.10.50.40 262 386 4.6E-32 T 14-10-2018 VS_0586 7db7084dd45da19b42e0373ce1897d22 569 Gene3D G3DSA:1.10.3720.10 299 562 5.0E-30 T 14-10-2018 IPR035906 MetI-like superfamily VS_0586 7db7084dd45da19b42e0373ce1897d22 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 336 487 5.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0586 7db7084dd45da19b42e0373ce1897d22 569 SUPERFAMILY SSF161098 295 550 4.71E-36 T 14-10-2018 IPR035906 MetI-like superfamily VS_0586 7db7084dd45da19b42e0373ce1897d22 569 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 285 560 3.3E-76 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VS_0230 5e74f5f67500d22cbe9cf419b3df416b 286 Gene3D G3DSA:3.40.50.720 3 273 2.6E-94 T 14-10-2018 VS_0230 5e74f5f67500d22cbe9cf419b3df416b 286 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 285 9.8E-94 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VS_0230 5e74f5f67500d22cbe9cf419b3df416b 286 Gene3D G3DSA:3.90.25.10 159 280 2.6E-94 T 14-10-2018 VS_0230 5e74f5f67500d22cbe9cf419b3df416b 286 Pfam PF04321 RmlD substrate binding domain 1 285 4.8E-90 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 VS_0230 5e74f5f67500d22cbe9cf419b3df416b 286 SUPERFAMILY SSF51735 1 285 2.19E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0463 37abdf7142adb72c8e7eb6b04fd0e5af 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 245 1.5E-42 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VS_2597 4471016fb5007249dae7f38fe7dc399e 197 Gene3D G3DSA:3.90.950.20 24 193 2.1E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal VS_2597 4471016fb5007249dae7f38fe7dc399e 197 Pfam PF02464 Competence-damaged protein 38 191 1.8E-56 T 14-10-2018 IPR008136 CinA, C-terminal VS_2597 4471016fb5007249dae7f38fe7dc399e 197 SUPERFAMILY SSF142433 37 192 2.35E-54 T 14-10-2018 IPR036653 CinA-like, C-terminal VS_2597 4471016fb5007249dae7f38fe7dc399e 197 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 45 188 8.4E-46 T 14-10-2018 IPR008136 CinA, C-terminal VS_II0473 332634d54b7a71c389178e7b79b80154 397 Gene3D G3DSA:3.40.50.300 146 381 2.2E-15 T 14-10-2018 VS_II0473 332634d54b7a71c389178e7b79b80154 397 SUPERFAMILY SSF52540 148 338 4.13E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0473 332634d54b7a71c389178e7b79b80154 397 Pfam PF13614 AAA domain 149 314 5.1E-7 T 14-10-2018 IPR025669 AAA domain VS_1477 8497923efc912159b8fc7b51a22223c9 344 Gene3D G3DSA:3.40.190.10 132 317 7.6E-107 T 14-10-2018 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 2.4E-66 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_1477 8497923efc912159b8fc7b51a22223c9 344 SUPERFAMILY SSF53850 28 332 1.84E-83 T 14-10-2018 VS_1477 8497923efc912159b8fc7b51a22223c9 344 Gene3D G3DSA:3.40.190.10 32 311 7.6E-107 T 14-10-2018 VS_1477 8497923efc912159b8fc7b51a22223c9 344 Pfam PF13416 Bacterial extracellular solute-binding protein 43 310 3.1E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VS_1477 8497923efc912159b8fc7b51a22223c9 344 PIRSF PIRSF019574 1 344 1.9E-107 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VS_2407 4cf12295c5ad3540077d6563b73892db 169 SUPERFAMILY SSF101307 10 161 1.44E-49 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VS_2407 4cf12295c5ad3540077d6563b73892db 169 PIRSF PIRSF006162 7 168 1.4E-54 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VS_2407 4cf12295c5ad3540077d6563b73892db 169 Pfam PF04608 Phosphatidylglycerophosphatase A 16 161 2.8E-52 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VS_II1299 9430231901b69a5ce9d85729caa20243 170 Gene3D G3DSA:3.40.1280.10 7 151 2.5E-20 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_II1299 9430231901b69a5ce9d85729caa20243 170 SUPERFAMILY SSF75217 3 143 1.26E-27 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_II1299 9430231901b69a5ce9d85729caa20243 170 Pfam PF00588 SpoU rRNA Methylase family 6 139 2.8E-20 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VS_II0855 2015ae56fe4dfa490f0aa2671eb7da37 1376 Gene3D G3DSA:2.60.40.2750 292 354 1.2E-6 T 14-10-2018 VS_1086 10249f0207cb116692972e6965b200a9 264 Pfam PF09335 SNARE associated Golgi protein 103 219 1.1E-21 T 14-10-2018 IPR032816 SNARE associated Golgi protein VS_2437 9a6c3e020efc1c582efc2b7ef4bc59b7 484 SUPERFAMILY SSF52540 116 448 8.38E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2437 9a6c3e020efc1c582efc2b7ef4bc59b7 484 Pfam PF00437 Type II/IV secretion system protein 133 410 1.3E-82 T 14-10-2018 IPR001482 Type II/IV secretion system protein VS_2437 9a6c3e020efc1c582efc2b7ef4bc59b7 484 Gene3D G3DSA:3.30.450.380 10 228 5.3E-44 T 14-10-2018 VS_2437 9a6c3e020efc1c582efc2b7ef4bc59b7 484 Gene3D G3DSA:3.40.50.300 229 461 2.4E-70 T 14-10-2018 VS_0952 8defe5d297facb22f20c4488981c6cc1 514 SUPERFAMILY SSF47226 403 509 8.77E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0952 8defe5d297facb22f20c4488981c6cc1 514 Gene3D G3DSA:1.20.120.160 402 512 7.3E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_0952 8defe5d297facb22f20c4488981c6cc1 514 Pfam PF01627 Hpt domain 425 501 1.6E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VS_II0238 846335d94a31769f1acf2b767740ff9b 218 Pfam PF09335 SNARE associated Golgi protein 45 168 2.9E-17 T 14-10-2018 IPR032816 SNARE associated Golgi protein VS_1384 3908d8744f3aea220f94e427a022c874 1124 ProDom PD144061 ECS5259 GENOME STY4851 YJIT 27 505 3.0E-65 T 14-10-2018 VS_II0827 03fe4bf38d8415244e57c95691fa6c13 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 301 7.8E-21 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VS_II0827 03fe4bf38d8415244e57c95691fa6c13 384 Pfam PF01548 Transposase 9 157 3.6E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VS_1880 03fe4bf38d8415244e57c95691fa6c13 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 301 7.8E-21 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VS_1880 03fe4bf38d8415244e57c95691fa6c13 384 Pfam PF01548 Transposase 9 157 3.6E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VS_2664 90395febb82892ae7915c40aaf706257 271 Gene3D G3DSA:3.40.1010.10 2 135 7.2E-32 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VS_2664 90395febb82892ae7915c40aaf706257 271 Gene3D G3DSA:3.30.950.10 137 262 5.4E-13 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VS_2664 90395febb82892ae7915c40aaf706257 271 PIRSF PIRSF036427 2 243 4.6E-63 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 VS_2664 90395febb82892ae7915c40aaf706257 271 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 4 233 8.4E-65 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 VS_2664 90395febb82892ae7915c40aaf706257 271 SUPERFAMILY SSF53790 2 234 3.66E-40 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VS_2664 90395febb82892ae7915c40aaf706257 271 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 222 1.2E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VS_II0124 fd0c06a1c8fc6b026c6239576b256f25 312 Pfam PF03466 LysR substrate binding domain 88 310 1.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II0124 fd0c06a1c8fc6b026c6239576b256f25 312 SUPERFAMILY SSF53850 88 311 1.36E-37 T 14-10-2018 VS_II0124 fd0c06a1c8fc6b026c6239576b256f25 312 Gene3D G3DSA:3.40.190.290 92 309 1.2E-53 T 14-10-2018 VS_II0124 fd0c06a1c8fc6b026c6239576b256f25 312 SUPERFAMILY SSF46785 4 88 1.88E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0124 fd0c06a1c8fc6b026c6239576b256f25 312 Gene3D G3DSA:1.10.10.10 3 91 9.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0124 fd0c06a1c8fc6b026c6239576b256f25 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II0557 3c7a7a94a3c1da78c080f87e494324d8 217 Gene3D G3DSA:1.10.357.10 21 216 7.0E-56 T 14-10-2018 VS_II0557 3c7a7a94a3c1da78c080f87e494324d8 217 SUPERFAMILY SSF46689 20 94 8.72E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0557 3c7a7a94a3c1da78c080f87e494324d8 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 4.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0557 3c7a7a94a3c1da78c080f87e494324d8 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 4.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0557 3c7a7a94a3c1da78c080f87e494324d8 217 Pfam PF16925 Bacterial transcriptional repressor C-terminal 124 207 6.9E-8 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VS_II0557 3c7a7a94a3c1da78c080f87e494324d8 217 SUPERFAMILY SSF48498 101 213 3.34E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VS_II0557 3c7a7a94a3c1da78c080f87e494324d8 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 77 2.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0213 5885c15eedda3e7ae8cac77141ab799b 177 Pfam PF14316 Domain of unknown function (DUF4381) 20 167 1.5E-37 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 VS_II0658 9ca9f607703c8a1f08eac3c88ed07b50 194 Gene3D G3DSA:2.102.10.10 53 189 4.6E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_II0658 9ca9f607703c8a1f08eac3c88ed07b50 194 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 17 38 2.9E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VS_II0658 9ca9f607703c8a1f08eac3c88ed07b50 194 Pfam PF00355 Rieske [2Fe-2S] domain 92 161 3.5E-7 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VS_II0658 9ca9f607703c8a1f08eac3c88ed07b50 194 TIGRFAM TIGR02694 arsenite_ox_S: arsenite oxidase, small subunit 55 187 1.8E-33 T 14-10-2018 IPR014067 Arsenite oxidase, small subunit MetaCyc: PWY-7429 VS_II0658 9ca9f607703c8a1f08eac3c88ed07b50 194 SUPERFAMILY SSF50022 18 174 2.12E-17 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VS_2874 4969d85ec92de537f5f86998bea3367b 173 Pfam PF04351 Pilus assembly protein, PilP 27 172 3.9E-41 T 14-10-2018 IPR007446 Pilus assembly protein PilP VS_2874 4969d85ec92de537f5f86998bea3367b 173 PIRSF PIRSF016481 2 173 1.7E-54 T 14-10-2018 IPR007446 Pilus assembly protein PilP VS_2874 4969d85ec92de537f5f86998bea3367b 173 Gene3D G3DSA:2.30.30.830 93 173 3.3E-24 T 14-10-2018 VS_II1426 2084eb35ad40f51082885745d926afd1 155 Pfam PF07670 Nucleoside recognition 31 124 7.0E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_II1096 63e42e5384e1dbaa40fb708ebb4b8ae6 365 Gene3D G3DSA:1.25.40.10 73 231 3.6E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II1096 63e42e5384e1dbaa40fb708ebb4b8ae6 365 SUPERFAMILY SSF48452 64 160 2.61E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_II1096 63e42e5384e1dbaa40fb708ebb4b8ae6 365 Pfam PF02698 DUF218 domain 194 312 2.5E-18 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VS_1165 0768579b8c8a82d7c3c47dc863eb7b42 168 Gene3D G3DSA:2.40.128.270 60 163 1.1E-29 T 14-10-2018 IPR038670 HslJ-like superfamily VS_1165 0768579b8c8a82d7c3c47dc863eb7b42 168 Pfam PF03724 META domain 54 158 4.6E-26 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VS_2306 e1534a9e5047b5be130bf2104841b9c8 180 SUPERFAMILY SSF55021 1 83 1.66E-16 T 14-10-2018 VS_2306 e1534a9e5047b5be130bf2104841b9c8 180 PIRSF PIRSF028103 1 178 5.5E-64 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VS_2306 e1534a9e5047b5be130bf2104841b9c8 180 SUPERFAMILY SSF55021 89 176 3.27E-21 T 14-10-2018 VS_2306 e1534a9e5047b5be130bf2104841b9c8 180 Gene3D G3DSA:3.30.70.260 87 180 4.4E-42 T 14-10-2018 VS_2306 e1534a9e5047b5be130bf2104841b9c8 180 Pfam PF13740 ACT domain 3 78 1.9E-23 T 14-10-2018 VS_2306 e1534a9e5047b5be130bf2104841b9c8 180 Gene3D G3DSA:3.30.70.260 1 85 6.7E-24 T 14-10-2018 VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 5.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 198 212 5.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 5.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 SUPERFAMILY SSF53474 3 252 2.41E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 Gene3D G3DSA:3.40.50.1820 4 253 5.2E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 Pfam PF12697 Alpha/beta hydrolase family 16 246 2.3E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 PRINTS PR00412 Epoxide hydrolase signature 229 251 3.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2254 153c7f57a8122bb91dd0f1dc9b38f4ea 253 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VS_2033 20dec03f5a94bf15a72b40e5d3687151 205 Gene3D G3DSA:1.10.3890.10 1 205 1.5E-76 T 14-10-2018 IPR035932 HflD-like superfamily VS_2033 20dec03f5a94bf15a72b40e5d3687151 205 SUPERFAMILY SSF101322 2 204 6.41E-79 T 14-10-2018 IPR035932 HflD-like superfamily VS_2033 20dec03f5a94bf15a72b40e5d3687151 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 8.0E-96 T 14-10-2018 VS_2033 20dec03f5a94bf15a72b40e5d3687151 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.629 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VS_2033 20dec03f5a94bf15a72b40e5d3687151 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 8.2E-76 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.4E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 Pfam PF01039 Carboxyl transferase domain 99 240 2.6E-13 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 SUPERFAMILY SSF52096 25 283 4.1E-83 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 Gene3D G3DSA:3.90.226.10 25 285 3.0E-81 T 14-10-2018 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.873 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_0904 8ec7c663649323b4e1bf0d4219cc429b 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 7.4E-138 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VS_0346 a807160de8c29aa4810647089a87a656 1290 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 9 1278 0.0 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 VS_0346 a807160de8c29aa4810647089a87a656 1290 Pfam PF13116 Protein of unknown function 505 791 2.0E-90 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 VS_0346 a807160de8c29aa4810647089a87a656 1290 Pfam PF13502 AsmA-like C-terminal region 1028 1268 6.0E-60 T 14-10-2018 IPR032712 AsmA-like, C-terminal VS_1652 ccdbd674474b8fd87eff11705b0fb31c 205 Pfam PF13489 Methyltransferase domain 39 142 2.1E-8 T 14-10-2018 VS_1652 ccdbd674474b8fd87eff11705b0fb31c 205 Gene3D G3DSA:3.40.50.150 5 197 2.2E-20 T 14-10-2018 VS_1652 ccdbd674474b8fd87eff11705b0fb31c 205 SUPERFAMILY SSF53335 25 198 4.33E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2296 eda84886e08fb8b87dc6674fc24c645f 158 Pfam PF11143 Protein of unknown function (DUF2919) 8 152 2.4E-52 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 VS_II0996 a22d6e9980d4bc630e448f2e29b45fe8 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 2.7E-217 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VS_II0996 a22d6e9980d4bc630e448f2e29b45fe8 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 3.5E-179 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VS_II0318 34dcdc8035b8c4501dd2de33a437c87a 203 Pfam PF13649 Methyltransferase domain 54 130 1.8E-11 T 14-10-2018 VS_II0318 34dcdc8035b8c4501dd2de33a437c87a 203 SUPERFAMILY SSF53335 29 133 2.24E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II0318 34dcdc8035b8c4501dd2de33a437c87a 203 Gene3D G3DSA:3.40.50.150 23 167 8.5E-17 T 14-10-2018 VS_II1111 b857983d9594cb419b9a5a9f64ebfe82 145 Gene3D G3DSA:3.30.450.20 6 141 5.7E-30 T 14-10-2018 VS_II1111 b857983d9594cb419b9a5a9f64ebfe82 145 Pfam PF00989 PAS fold 16 134 2.6E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VS_II1111 b857983d9594cb419b9a5a9f64ebfe82 145 SUPERFAMILY SSF55785 10 129 4.54E-10 T 14-10-2018 IPR035965 PAS domain superfamily VS_II0214 7a7e0f3c1e69c51e7321a1f01b12ad3b 316 SUPERFAMILY SSF53300 96 239 3.56E-5 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0214 7a7e0f3c1e69c51e7321a1f01b12ad3b 316 Pfam PF01882 Protein of unknown function DUF58 60 144 1.5E-21 T 14-10-2018 IPR002881 Domain of unknown function DUF58 VS_0325 d466054acb536342b5106f0952b140d0 480 SUPERFAMILY SSF53067 47 154 1.81E-8 T 14-10-2018 VS_0325 d466054acb536342b5106f0952b140d0 480 PIRSF PIRSF028153 1 480 1.7E-190 T 14-10-2018 IPR016871 MSHA biogenesis protein, MshI VS_0335 0551e609c817c9895dad85ae36959265 183 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0335 0551e609c817c9895dad85ae36959265 183 Gene3D G3DSA:3.30.700.10 7 177 1.3E-13 T 14-10-2018 VS_0335 0551e609c817c9895dad85ae36959265 183 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 7.3E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0335 0551e609c817c9895dad85ae36959265 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0335 0551e609c817c9895dad85ae36959265 183 SUPERFAMILY SSF54523 7 170 2.43E-12 T 14-10-2018 VS_1178 890029d4a8c9ad100ad4e646efa64c2f 289 Gene3D G3DSA:3.40.50.1000 48 279 1.9E-57 T 14-10-2018 IPR023214 HAD superfamily VS_1178 890029d4a8c9ad100ad4e646efa64c2f 289 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 47 282 5.6E-56 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal VS_1178 890029d4a8c9ad100ad4e646efa64c2f 289 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 48 242 1.9E-21 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VS_1178 890029d4a8c9ad100ad4e646efa64c2f 289 Gene3D G3DSA:3.90.1070.10 134 202 1.9E-57 T 14-10-2018 VS_1178 890029d4a8c9ad100ad4e646efa64c2f 289 SUPERFAMILY SSF56784 43 279 1.84E-33 T 14-10-2018 IPR036412 HAD-like superfamily VS_1726 4525c8def89485b9fa4ace33d4979939 271 SUPERFAMILY SSF51197 2 270 1.14E-83 T 14-10-2018 VS_1726 4525c8def89485b9fa4ace33d4979939 271 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 4 269 3.1E-59 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VS_1726 4525c8def89485b9fa4ace33d4979939 271 Gene3D G3DSA:3.60.130.10 1 271 3.3E-81 T 14-10-2018 VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 Gene3D G3DSA:3.40.640.10 107 478 3.3E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 2.9E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 2.9E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 SUPERFAMILY SSF46785 18 83 2.84E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 Pfam PF00155 Aminotransferase class I and II 135 421 4.0E-25 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 1.5E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 SMART SM00345 22 81 1.6E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 SUPERFAMILY SSF53383 122 483 1.34E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0337 d1edc9b2ef2fd407110ff16419e06b7d 485 Gene3D G3DSA:1.10.10.10 13 85 5.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 SUPERFAMILY SSF54631 145 283 4.98E-14 T 14-10-2018 VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 SUPERFAMILY SSF161093 290 462 9.68E-35 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 Gene3D G3DSA:1.10.357.20 286 463 5.0E-39 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 SUPERFAMILY SSF158791 20 141 1.96E-11 T 14-10-2018 VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 Gene3D G3DSA:1.25.60.10 10 139 4.1E-8 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 Pfam PF01769 Divalent cation transporter 333 453 1.4E-20 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 Gene3D G3DSA:3.10.580.10 142 264 8.2E-15 T 14-10-2018 VS_II0236 c121cbe5e5c2416ebcb991b407744cd1 463 Pfam PF03448 MgtE intracellular N domain 40 143 2.6E-9 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VS_II0892 7a992de2741b7105aa07f595e65719bb 155 SUPERFAMILY SSF56524 25 154 2.09E-16 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VS_2334 530f52b49b72177bd86b5f9bd21f6769 107 SUPERFAMILY SSF46626 22 106 4.28E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_2334 530f52b49b72177bd86b5f9bd21f6769 107 Gene3D G3DSA:1.10.760.10 25 107 7.8E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VS_2334 530f52b49b72177bd86b5f9bd21f6769 107 PRINTS PR00605 Class IC cytochrome C signature 81 103 3.3E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VS_2334 530f52b49b72177bd86b5f9bd21f6769 107 PRINTS PR00605 Class IC cytochrome C signature 36 47 3.3E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VS_2334 530f52b49b72177bd86b5f9bd21f6769 107 Pfam PF00034 Cytochrome c 36 107 6.5E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0325 9efb003ea519bb2ed953d5df30fb3ae2 345 SUPERFAMILY SSF55073 192 343 1.33E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VS_II0325 9efb003ea519bb2ed953d5df30fb3ae2 345 Gene3D G3DSA:3.30.70.270 172 344 2.5E-49 T 14-10-2018 VS_II0325 9efb003ea519bb2ed953d5df30fb3ae2 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 183 342 1.3E-40 T 14-10-2018 IPR000160 GGDEF domain VS_II0325 9efb003ea519bb2ed953d5df30fb3ae2 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 186 341 1.2E-40 T 14-10-2018 IPR000160 GGDEF domain VS_II0325 9efb003ea519bb2ed953d5df30fb3ae2 345 SMART SM00267 175 345 2.1E-51 T 14-10-2018 IPR000160 GGDEF domain VS_II0731 96a72786e99ee4167848d91a1177ad03 93 Pfam PF10115 Transcriptional activator HlyU 2 92 1.2E-40 T 14-10-2018 IPR018772 Transcription activator HlyU VS_2430 b434d62c6f1b64caa3021564ee8149fc 382 Pfam PF02417 Chromate transporter 212 375 1.9E-31 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VS_2430 b434d62c6f1b64caa3021564ee8149fc 382 Pfam PF02417 Chromate transporter 3 168 1.3E-32 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VS_2430 b434d62c6f1b64caa3021564ee8149fc 382 PIRSF PIRSF004810 1 381 1.0E-111 T 14-10-2018 IPR014047 Chromate transporter, long chain VS_2430 b434d62c6f1b64caa3021564ee8149fc 382 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 368 6.8E-87 T 14-10-2018 IPR014047 Chromate transporter, long chain VS_2315 d4f7014963cb93e0c1758faa3c171b96 432 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 32 264 2.5E-68 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 PRINTS PR01035 Tetracycline resistance protein signature 12 28 2.8E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 PRINTS PR01035 Tetracycline resistance protein signature 42 61 2.8E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 PRINTS PR01035 Tetracycline resistance protein signature 100 121 2.8E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 PRINTS PR01035 Tetracycline resistance protein signature 160 180 2.8E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 Pfam PF07690 Major Facilitator Superfamily 11 322 4.7E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 Gene3D G3DSA:1.20.1250.20 4 196 7.7E-28 T 14-10-2018 VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 SUPERFAMILY SSF103473 4 382 3.53E-65 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II0100 ce8b51f2fcd5318edce0740886428ad8 397 Gene3D G3DSA:1.20.1250.20 197 392 1.3E-24 T 14-10-2018 VS_II0660 8344068a780f2028178bf58465cf6e1b 147 Pfam PF05425 Copper resistance protein D 44 138 3.7E-9 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 VS_0700 a8621742e679474bd00414cddd1e42cc 84 Pfam PF04400 (Na+)-NQR maturation NqrM 22 62 9.7E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VS_0705 bae2fb54b48e265905505c84fabcd452 264 Pfam PF11101 Protein of unknown function (DUF2884) 38 262 1.1E-74 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 Pfam PF03222 Tryptophan/tyrosine permease family 3 380 3.5E-76 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 PRINTS PR00166 Aromatic amino acid permease signature 182 204 3.0E-28 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 PRINTS PR00166 Aromatic amino acid permease signature 37 56 3.0E-28 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 PRINTS PR00166 Aromatic amino acid permease signature 306 324 3.0E-28 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 PRINTS PR00166 Aromatic amino acid permease signature 147 167 3.0E-28 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 PRINTS PR00166 Aromatic amino acid permease signature 327 346 3.0E-28 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 PRINTS PR00166 Aromatic amino acid permease signature 10 33 3.0E-28 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_1805 0686ad0a523dfe14f41f67c51a130c8b 384 PRINTS PR00166 Aromatic amino acid permease signature 82 102 3.0E-28 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VS_II0185 7234d886f1a4a3a2932fd0b11f557621 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 716 1.8E-184 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VS_II0185 7234d886f1a4a3a2932fd0b11f557621 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 6.1E-125 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VS_II0185 7234d886f1a4a3a2932fd0b11f557621 726 SUPERFAMILY SSF51445 162 718 2.63E-147 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VS_2114 26b98c5e24af0dc66ea77dac9f28e7bf 665 SUPERFAMILY SSF81345 353 665 3.14E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2114 26b98c5e24af0dc66ea77dac9f28e7bf 665 SUPERFAMILY SSF81345 21 336 3.4E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2114 26b98c5e24af0dc66ea77dac9f28e7bf 665 Gene3D G3DSA:1.10.3470.10 356 665 2.1E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2114 26b98c5e24af0dc66ea77dac9f28e7bf 665 Gene3D G3DSA:1.10.3470.10 13 341 8.0E-77 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2114 26b98c5e24af0dc66ea77dac9f28e7bf 665 Pfam PF01032 FecCD transport family 370 665 9.7E-70 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_2114 26b98c5e24af0dc66ea77dac9f28e7bf 665 Pfam PF01032 FecCD transport family 26 336 7.8E-73 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II0578 251023c552c0b9d74f9d687d51dfe39b 312 SUPERFAMILY SSF103481 42 142 3.27E-10 T 14-10-2018 VS_II0578 251023c552c0b9d74f9d687d51dfe39b 312 SUPERFAMILY SSF103481 214 291 9.55E-6 T 14-10-2018 VS_II0578 251023c552c0b9d74f9d687d51dfe39b 312 Pfam PF00892 EamA-like transporter family 152 291 3.8E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0578 251023c552c0b9d74f9d687d51dfe39b 312 Pfam PF00892 EamA-like transporter family 6 139 2.6E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_1995 aa95520afd10f96f473d0f41e19bbab3 295 SUPERFAMILY SSF161098 89 276 1.44E-21 T 14-10-2018 IPR035906 MetI-like superfamily VS_1995 aa95520afd10f96f473d0f41e19bbab3 295 Gene3D G3DSA:1.10.3720.10 88 291 6.1E-18 T 14-10-2018 IPR035906 MetI-like superfamily VS_1995 aa95520afd10f96f473d0f41e19bbab3 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 9.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1995 aa95520afd10f96f473d0f41e19bbab3 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 9.6E-14 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VS_II0838 7f097f62be30074fc437c6f3eff1af2f 128 Gene3D G3DSA:3.10.180.10 10 128 2.5E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II0838 7f097f62be30074fc437c6f3eff1af2f 128 SUPERFAMILY SSF54593 7 125 8.94E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II0838 7f097f62be30074fc437c6f3eff1af2f 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 125 2.3E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_II1494 3a245b913c8dbaaa0534214ab632cf3a 309 Gene3D G3DSA:1.10.10.10 2 92 9.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1494 3a245b913c8dbaaa0534214ab632cf3a 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 7.1E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_II1494 3a245b913c8dbaaa0534214ab632cf3a 309 Pfam PF03466 LysR substrate binding domain 98 243 3.7E-8 T 14-10-2018 IPR005119 LysR, substrate-binding VS_II1494 3a245b913c8dbaaa0534214ab632cf3a 309 Gene3D G3DSA:3.40.190.10 174 272 7.9E-15 T 14-10-2018 VS_II1494 3a245b913c8dbaaa0534214ab632cf3a 309 SUPERFAMILY SSF53850 93 302 3.8E-16 T 14-10-2018 VS_II1494 3a245b913c8dbaaa0534214ab632cf3a 309 Gene3D G3DSA:3.40.190.10 93 299 7.9E-15 T 14-10-2018 VS_II1494 3a245b913c8dbaaa0534214ab632cf3a 309 SUPERFAMILY SSF46785 7 88 2.65E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1344 ac620d7eef4aa67782aeec25dbada0fa 233 Pfam PF01613 Flavin reductase like domain 35 167 1.1E-13 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VS_II1344 ac620d7eef4aa67782aeec25dbada0fa 233 Gene3D G3DSA:2.30.110.10 7 208 2.9E-43 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VS_II1344 ac620d7eef4aa67782aeec25dbada0fa 233 SUPERFAMILY SSF50475 8 199 3.19E-31 T 14-10-2018 VS_II1344 ac620d7eef4aa67782aeec25dbada0fa 233 SMART SM00903 26 181 0.0019 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VS_1749 c8d36060b5e70b24a6aae22d00e9b3b9 125 SMART SM00905 7 117 5.5E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VS_1749 c8d36060b5e70b24a6aae22d00e9b3b9 125 TIGRFAM TIGR00526 folB_dom: FolB domain 6 119 2.5E-29 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VS_1749 c8d36060b5e70b24a6aae22d00e9b3b9 125 Gene3D G3DSA:3.30.1130.10 1 118 1.7E-41 T 14-10-2018 VS_1749 c8d36060b5e70b24a6aae22d00e9b3b9 125 SUPERFAMILY SSF55620 4 116 3.84E-29 T 14-10-2018 VS_1749 c8d36060b5e70b24a6aae22d00e9b3b9 125 Pfam PF02152 Dihydroneopterin aldolase 7 115 2.2E-26 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VS_1961 ce7c58c763107d90591707f908ed5f25 163 SUPERFAMILY SSF75217 11 150 1.36E-27 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VS_1961 ce7c58c763107d90591707f908ed5f25 163 Pfam PF00588 SpoU rRNA Methylase family 16 147 1.2E-18 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VS_1961 ce7c58c763107d90591707f908ed5f25 163 Gene3D G3DSA:3.40.1280.10 15 156 1.1E-16 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VS_II0574 d8c5696ff2db1cc855e0dcd54a2cf3e4 226 Gene3D G3DSA:2.60.40.2130 29 172 1.6E-13 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VS_II0574 d8c5696ff2db1cc855e0dcd54a2cf3e4 226 Pfam PF06468 Spondin_N 41 160 2.4E-10 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VS_II0798 d530495cad5a1c97ea77dcaf91f6ea20 241 SUPERFAMILY SSF46689 8 87 1.8E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0798 d530495cad5a1c97ea77dcaf91f6ea20 241 Gene3D G3DSA:1.10.357.10 1 212 4.8E-21 T 14-10-2018 VS_II0798 d530495cad5a1c97ea77dcaf91f6ea20 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0798 d530495cad5a1c97ea77dcaf91f6ea20 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0798 d530495cad5a1c97ea77dcaf91f6ea20 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 7.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VS_II0032 163c1726df24989f9129e63445e84efd 196 SUPERFAMILY SSF56925 30 196 7.85E-25 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VS_II0032 163c1726df24989f9129e63445e84efd 196 Pfam PF13505 Outer membrane protein beta-barrel domain 14 196 1.4E-23 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VS_II0032 163c1726df24989f9129e63445e84efd 196 Gene3D G3DSA:2.40.160.20 29 196 5.1E-23 T 14-10-2018 VS_1810 ac38dfa80c5c30dd2d50d35667637f54 458 SUPERFAMILY SSF52096 103 218 3.18E-7 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_1810 ac38dfa80c5c30dd2d50d35667637f54 458 Gene3D G3DSA:3.90.226.10 95 221 2.0E-5 T 14-10-2018 VS_2308 ea7cdd368e92cb423668b17f6477c9bd 358 Pfam PF01594 AI-2E family transporter 20 345 1.3E-73 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VS_II1412 82b5c5104c32e79fe499f942a8747492 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.5E-32 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VS_II1412 82b5c5104c32e79fe499f942a8747492 93 SUPERFAMILY SSF51182 1 93 7.2E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_II1412 82b5c5104c32e79fe499f942a8747492 93 Gene3D G3DSA:2.60.120.10 1 93 9.3E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1412 82b5c5104c32e79fe499f942a8747492 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 24.62 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VS_II1408 070d4d2e8437cbc60717f4058b94fb7b 112 Pfam PF08895 Domain of unknown function (DUF1840) 1 104 7.7E-33 T 14-10-2018 IPR014991 Protein of unknown function DUF1840 VS_II1169 06a2536ebbefe860baa98453a6af518f 333 Pfam PF11383 Protein of unknown function (DUF3187) 21 333 3.0E-125 T 14-10-2018 IPR021523 Protein of unknown function DUF3187 VS_2552 77e80954b8231addf3f8f39bc341f9fa 84 SUPERFAMILY SSF52540 2 73 1.45E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2552 77e80954b8231addf3f8f39bc341f9fa 84 Gene3D G3DSA:3.40.50.300 1 83 1.4E-18 T 14-10-2018 VS_2552 77e80954b8231addf3f8f39bc341f9fa 84 Pfam PF01121 Dephospho-CoA kinase 2 61 3.5E-17 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VS_II0975 fc36fa5d46170b1161a85e3d4228403a 144 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 47 107 3.5E-15 T 14-10-2018 IPR032871 AHH domain-containing protein VS_0690 1618a69e2eaf21dd4607c10916f11bfa 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.1E-51 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG VS_0777 753abb5298ed91028ffdeb04f808484c 232 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 52 220 1.8E-7 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VS_0777 753abb5298ed91028ffdeb04f808484c 232 SUPERFAMILY SSF89392 40 218 1.53E-18 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VS_0777 753abb5298ed91028ffdeb04f808484c 232 Gene3D G3DSA:2.50.20.10 38 232 3.7E-23 T 14-10-2018 VS_II0697 5838d9cf4e3b57a7c302a9fae92b68db 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 425 1.9E-53 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0697 5838d9cf4e3b57a7c302a9fae92b68db 465 Pfam PF01554 MatE 28 188 1.8E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0697 5838d9cf4e3b57a7c302a9fae92b68db 465 Pfam PF01554 MatE 252 414 3.0E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0697 5838d9cf4e3b57a7c302a9fae92b68db 465 PIRSF PIRSF006603 3 463 1.4E-60 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0768 58ae099f7f3c5c05e13c27b14193076e 563 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 9.7E-39 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VS_II0768 58ae099f7f3c5c05e13c27b14193076e 563 SUPERFAMILY SSF53850 120 558 1.66E-54 T 14-10-2018 VS_II0768 58ae099f7f3c5c05e13c27b14193076e 563 Gene3D G3DSA:3.40.190.10 122 312 3.2E-32 T 14-10-2018 VS_II0768 58ae099f7f3c5c05e13c27b14193076e 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 9.2E-18 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II1147 e01e36d85acd6d974741547947f6d9ed 155 Pfam PF10517 Electron transfer DM13 59 154 4.2E-20 T 14-10-2018 IPR019545 DM13 domain VS_1932 0f4bb02e9005316e20640a26788d02c6 194 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 41 188 2.0E-62 T 14-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 VS_1932 0f4bb02e9005316e20640a26788d02c6 194 SUPERFAMILY SSF48695 5 189 3.6E-29 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VS_1932 0f4bb02e9005316e20640a26788d02c6 194 Gene3D G3DSA:3.90.10.10 26 162 1.6E-6 T 14-10-2018 VS_1932 0f4bb02e9005316e20640a26788d02c6 194 Pfam PF14522 Cytochrome c7 and related cytochrome c 79 159 7.6E-6 T 14-10-2018 IPR029467 C-type polyheme cytochrome OmcB VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 Gene3D G3DSA:3.40.190.10 167 267 5.7E-96 T 14-10-2018 VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 Gene3D G3DSA:1.10.10.10 1 86 6.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 Pfam PF03466 LysR substrate binding domain 91 292 1.6E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 SUPERFAMILY SSF46785 1 113 9.07E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 SUPERFAMILY SSF53850 91 322 5.16E-41 T 14-10-2018 VS_2050 1126c5244a578fdef2583e760b5e5ba1 324 Gene3D G3DSA:3.40.190.10 93 303 5.7E-96 T 14-10-2018 VS_1647 866d462307883457859fe01e66b09c36 1344 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 560 576 2.2E-11 T 14-10-2018 VS_1647 866d462307883457859fe01e66b09c36 1344 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 871 883 2.2E-11 T 14-10-2018 VS_1647 866d462307883457859fe01e66b09c36 1344 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 607 621 2.2E-11 T 14-10-2018 VS_1647 866d462307883457859fe01e66b09c36 1344 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 911 935 2.2E-11 T 14-10-2018 VS_1647 866d462307883457859fe01e66b09c36 1344 Gene3D G3DSA:3.40.50.150 782 987 4.0E-11 T 14-10-2018 VS_1647 866d462307883457859fe01e66b09c36 1344 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 874 880 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VS_1647 866d462307883457859fe01e66b09c36 1344 SUPERFAMILY SSF53335 287 957 1.05E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_2685 c8aee56be63decd93a4f28699eb24c90 185 Pfam PF02325 YGGT family 109 173 4.9E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VS_2685 c8aee56be63decd93a4f28699eb24c90 185 Pfam PF02325 YGGT family 10 77 2.6E-20 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VS_II0065 39c110c5e8e6a65e4ca4c4a98182c317 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 7.8E-27 T 14-10-2018 IPR032036 Protein of unknown function DUF5062 VS_II0065 39c110c5e8e6a65e4ca4c4a98182c317 86 Gene3D G3DSA:1.20.120.1930 1 86 1.7E-36 T 14-10-2018 VS_0035 a01b645e016f6f8f17afbe2fb1be85b5 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 3.1E-20 T 14-10-2018 IPR001727 Gdt1 family VS_0035 a01b645e016f6f8f17afbe2fb1be85b5 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 177 1.0E-20 T 14-10-2018 IPR001727 Gdt1 family VS_II0724 0c6932acf81f307b1543cece62b2abea 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 222 7.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0724 0c6932acf81f307b1543cece62b2abea 232 Gene3D G3DSA:1.10.3720.10 2 227 6.8E-60 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0724 0c6932acf81f307b1543cece62b2abea 232 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 222 1.7E-74 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 VS_II0724 0c6932acf81f307b1543cece62b2abea 232 SUPERFAMILY SSF161098 8 220 9.55E-51 T 14-10-2018 IPR035906 MetI-like superfamily VS_0597 d69760e1ddd7182c57f0ab8c3898470d 147 SMART SM00116 11 59 7.8E-8 T 14-10-2018 IPR000644 CBS domain VS_0597 d69760e1ddd7182c57f0ab8c3898470d 147 SMART SM00116 84 131 2.5E-6 T 14-10-2018 IPR000644 CBS domain VS_0597 d69760e1ddd7182c57f0ab8c3898470d 147 Gene3D G3DSA:3.10.580.10 1 147 1.5E-51 T 14-10-2018 VS_0597 d69760e1ddd7182c57f0ab8c3898470d 147 Pfam PF00571 CBS domain 79 127 5.2E-10 T 14-10-2018 IPR000644 CBS domain VS_0597 d69760e1ddd7182c57f0ab8c3898470d 147 Pfam PF00571 CBS domain 4 58 8.4E-13 T 14-10-2018 IPR000644 CBS domain VS_0597 d69760e1ddd7182c57f0ab8c3898470d 147 SUPERFAMILY SSF54631 1 132 4.04E-33 T 14-10-2018 VS_0960 d8d065f3c326512f044ffcba8a358e77 178 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 12 175 7.6E-66 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VS_0621 77fb310674f83e132f4365da0c24ea0d 204 PIRSF PIRSF006170 1 204 2.1E-51 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 VS_0621 77fb310674f83e132f4365da0c24ea0d 204 Gene3D G3DSA:1.25.40.10 52 165 3.6E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0621 77fb310674f83e132f4365da0c24ea0d 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 6.0E-54 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VS_0621 77fb310674f83e132f4365da0c24ea0d 204 SUPERFAMILY SSF48452 89 188 1.56E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_1152 de1c732b0b7dd0904e4fe3175a1a76ca 377 SUPERFAMILY SSF53383 18 348 3.64E-57 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1152 de1c732b0b7dd0904e4fe3175a1a76ca 377 Gene3D G3DSA:3.90.1150.10 8 340 1.4E-111 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1152 de1c732b0b7dd0904e4fe3175a1a76ca 377 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 348 1.0E-91 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VS_1152 de1c732b0b7dd0904e4fe3175a1a76ca 377 Pfam PF00155 Aminotransferase class I and II 49 346 1.1E-43 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_1152 de1c732b0b7dd0904e4fe3175a1a76ca 377 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VS_1152 de1c732b0b7dd0904e4fe3175a1a76ca 377 Gene3D G3DSA:3.40.640.10 51 254 1.4E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II1187 0e7368d8217a5082b1e3adf2590ff633 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 5.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II1187 0e7368d8217a5082b1e3adf2590ff633 123 Gene3D G3DSA:1.10.10.10 7 123 2.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1187 0e7368d8217a5082b1e3adf2590ff633 123 SMART SM00345 14 73 2.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II1187 0e7368d8217a5082b1e3adf2590ff633 123 SUPERFAMILY SSF46785 1 77 7.08E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1317 f3f5fbeded7deefc2d2ae9ff9028cd43 228 Gene3D G3DSA:1.10.510.10 27 226 2.9E-19 T 14-10-2018 VS_1317 f3f5fbeded7deefc2d2ae9ff9028cd43 228 SUPERFAMILY SSF56112 40 224 1.08E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_1317 f3f5fbeded7deefc2d2ae9ff9028cd43 228 Pfam PF00069 Protein kinase domain 50 197 1.6E-14 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_1317 f3f5fbeded7deefc2d2ae9ff9028cd43 228 SMART SM00220 20 228 4.7E-4 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VS_1317 f3f5fbeded7deefc2d2ae9ff9028cd43 228 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 128 140 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VS_2570 be78aeba2f1b7915dce56926146a7694 107 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 107 44.943 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VS_2570 be78aeba2f1b7915dce56926146a7694 107 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 32 102 2.1E-20 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VS_2570 be78aeba2f1b7915dce56926146a7694 107 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 28 105 1.6E-20 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VS_1166 f7179801c38ee1f37bdf0afb1cf28178 86 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 3.4E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VS_1085 fcb1f6515f071a4528ee7a283a5ca4aa 105 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 14-10-2018 IPR001876 Zinc finger, RanBP2-type VS_1085 fcb1f6515f071a4528ee7a283a5ca4aa 105 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 1.8E-9 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 VS_II1310 622856f837ab23f50bbdb63f2911f157 147 Pfam PF01047 MarR family 40 97 3.9E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1310 622856f837ab23f50bbdb63f2911f157 147 Gene3D G3DSA:1.10.10.10 3 147 3.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II1310 622856f837ab23f50bbdb63f2911f157 147 SUPERFAMILY SSF46785 11 143 5.79E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II1310 622856f837ab23f50bbdb63f2911f157 147 SMART SM00347 33 131 1.0E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_II1363 6a14db4012523d58bb2c3a93650cecb2 131 SUPERFAMILY SSF55298 1 129 8.64E-22 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II1363 6a14db4012523d58bb2c3a93650cecb2 131 Pfam PF01042 Endoribonuclease L-PSP 11 128 3.9E-14 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_II1363 6a14db4012523d58bb2c3a93650cecb2 131 Gene3D G3DSA:3.30.1330.40 8 130 1.3E-20 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0747 ffcde1c7e503053d40a6b88a3c9f80b9 187 Pfam PF05036 Sporulation related domain 97 169 5.7E-11 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VS_II0747 ffcde1c7e503053d40a6b88a3c9f80b9 187 SUPERFAMILY SSF110997 96 159 5.36E-6 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_II0747 ffcde1c7e503053d40a6b88a3c9f80b9 187 Gene3D G3DSA:3.30.70.1070 80 178 4.5E-20 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VS_2232 feedb3719668379136a2df034ab16eac 76 Pfam PF09012 FeoC like transcriptional regulator 2 53 1.7E-12 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VS_2232 feedb3719668379136a2df034ab16eac 76 SUPERFAMILY SSF46785 1 55 2.6E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_II0784 ef4a45cf3432e62b8407fee0f407b4f7 590 SUPERFAMILY SSF52540 1 373 2.63E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0784 ef4a45cf3432e62b8407fee0f407b4f7 590 Gene3D G3DSA:3.40.50.300 1 152 3.1E-10 T 14-10-2018 VS_II0784 ef4a45cf3432e62b8407fee0f407b4f7 590 Pfam PF11398 Protein of unknown function (DUF2813) 1 169 2.0E-63 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 VS_II0784 ef4a45cf3432e62b8407fee0f407b4f7 590 Pfam PF11398 Protein of unknown function (DUF2813) 217 416 1.3E-73 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 VS_1508 7d13a8be74dcffb6f69e91d578210269 248 Pfam PF03942 DTW domain 32 218 7.5E-42 T 14-10-2018 IPR005636 DTW VS_1508 7d13a8be74dcffb6f69e91d578210269 248 SMART SM01144 29 224 4.4E-61 T 14-10-2018 IPR005636 DTW VS_II1520 edfc35ef4ea3a159576d2e9f95c4ba21 376 Pfam PF04209 homogentisate 1,2-dioxygenase 86 374 1.3E-21 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VS_II1520 edfc35ef4ea3a159576d2e9f95c4ba21 376 Gene3D G3DSA:2.60.120.10 66 167 8.9E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_II1520 edfc35ef4ea3a159576d2e9f95c4ba21 376 SUPERFAMILY SSF51182 56 374 6.99E-91 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VS_2389 d872774ef3a0a8c34c23fdc3851254d2 181 Gene3D G3DSA:3.40.1580.20 1 181 7.5E-68 T 14-10-2018 IPR038228 Syd superfamily VS_2389 d872774ef3a0a8c34c23fdc3851254d2 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 2.2E-69 T 14-10-2018 IPR009948 Syd GO:0009898 VS_2389 d872774ef3a0a8c34c23fdc3851254d2 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.287 T 14-10-2018 IPR009948 Syd GO:0009898 VS_2073 3adf2e9efbe20345221f98c47c350b87 179 SUPERFAMILY SSF53474 2 176 2.12E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2073 3adf2e9efbe20345221f98c47c350b87 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 47.974 T 14-10-2018 IPR022987 Uncharacterised protein family UPF0227 VS_2073 3adf2e9efbe20345221f98c47c350b87 179 Gene3D G3DSA:3.40.50.1820 1 179 6.9E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2073 3adf2e9efbe20345221f98c47c350b87 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.0E-67 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VS_2387 438dcbca2906c6788af5e4995068ee7c 282 SUPERFAMILY SSF53474 67 260 3.45E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1392 6cb094e2501881ca839d15787ba6a0ef 204 PRINTS PR01021 OMPA domain signature 116 131 1.8E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1392 6cb094e2501881ca839d15787ba6a0ef 204 PRINTS PR01021 OMPA domain signature 86 108 1.8E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1392 6cb094e2501881ca839d15787ba6a0ef 204 PRINTS PR01021 OMPA domain signature 131 147 1.8E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_1392 6cb094e2501881ca839d15787ba6a0ef 204 SUPERFAMILY SSF103088 68 183 2.09E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1392 6cb094e2501881ca839d15787ba6a0ef 204 Gene3D G3DSA:3.30.1330.60 54 189 2.3E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_1392 6cb094e2501881ca839d15787ba6a0ef 204 Pfam PF00691 OmpA family 85 173 2.3E-18 T 14-10-2018 IPR006665 OmpA-like domain VS_1392 6cb094e2501881ca839d15787ba6a0ef 204 SUPERFAMILY SSF103647 39 73 2.75E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VS_2027 e7f491157d29a064a9768adeec3ce9ce 533 Pfam PF03553 Na+/H+ antiporter family 168 498 8.7E-103 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VS_2428 db7af75d502c38d1e7ee9dba0c378f9e 387 Pfam PF03497 Anthrax toxin LF subunit 17 187 2.8E-71 T 14-10-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 VS_2428 db7af75d502c38d1e7ee9dba0c378f9e 387 Gene3D G3DSA:3.90.1760.10 50 219 7.5E-39 T 14-10-2018 IPR037017 Anthrax toxin, edema factor, central domain superfamily GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 VS_2428 db7af75d502c38d1e7ee9dba0c378f9e 387 Gene3D G3DSA:3.30.70.1720 220 351 1.1E-13 T 14-10-2018 VS_2428 db7af75d502c38d1e7ee9dba0c378f9e 387 SUPERFAMILY SSF81298 15 351 1.31E-57 T 14-10-2018 IPR035099 Anthrax toxin, edema factor, C-terminal KEGG: 00230+4.6.1.1 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 123 234 4.0E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 Gene3D G3DSA:1.10.540.10 123 236 3.3E-99 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 Gene3D G3DSA:2.40.110.10 237 360 3.3E-99 T 14-10-2018 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 SUPERFAMILY SSF56645 122 356 1.96E-42 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 SUPERFAMILY SSF47203 361 508 1.53E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 Pfam PF09317 Domain of unknown function (DUF1974) 515 801 9.6E-112 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.0E-14 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VS_2322 7bdac5cae992630ed38333ebd72dcf53 821 Gene3D G3DSA:1.20.140.10 361 508 3.3E-99 T 14-10-2018 VS_2496 fc9a514d9c87d0c2294ec3b78b40daa6 288 SUPERFAMILY SSF161093 107 285 1.31E-43 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VS_2496 fc9a514d9c87d0c2294ec3b78b40daa6 288 Gene3D G3DSA:1.10.357.20 101 285 4.8E-52 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VS_2496 fc9a514d9c87d0c2294ec3b78b40daa6 288 Pfam PF01769 Divalent cation transporter 149 278 7.8E-27 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VS_II0527 dd007ae07aa3a05f93c980af372148b4 156 SUPERFAMILY SSF55729 4 144 2.92E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0527 dd007ae07aa3a05f93c980af372148b4 156 Pfam PF13508 Acetyltransferase (GNAT) domain 55 135 7.0E-9 T 14-10-2018 IPR000182 GNAT domain VS_II0527 dd007ae07aa3a05f93c980af372148b4 156 Gene3D G3DSA:3.40.630.30 1 146 7.1E-14 T 14-10-2018 VS_II0429 1baec37bbc43c2e194d0e58ef5d901c3 248 SUPERFAMILY SSF89550 4 245 1.44E-58 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VS_II0429 1baec37bbc43c2e194d0e58ef5d901c3 248 Gene3D G3DSA:3.20.20.140 3 247 1.5E-59 T 14-10-2018 VS_II0429 1baec37bbc43c2e194d0e58ef5d901c3 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 51.891 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VS_II0429 1baec37bbc43c2e194d0e58ef5d901c3 248 SMART SM00481 5 79 3.5E-5 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VS_II1452 64b16127bf9d5d2b0f4c9904cf1c1538 143 Pfam PF12680 SnoaL-like domain 12 113 3.4E-12 T 14-10-2018 IPR037401 SnoaL-like domain VS_II1452 64b16127bf9d5d2b0f4c9904cf1c1538 143 Gene3D G3DSA:3.10.450.50 8 128 4.9E-19 T 14-10-2018 VS_II1452 64b16127bf9d5d2b0f4c9904cf1c1538 143 SUPERFAMILY SSF54427 8 128 2.25E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily VS_2239 5806ef816e4ee1b612c0b046e9eb1f6e 261 Gene3D G3DSA:1.10.3470.10 28 258 1.6E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2239 5806ef816e4ee1b612c0b046e9eb1f6e 261 SUPERFAMILY SSF81345 2 253 2.09E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_2239 5806ef816e4ee1b612c0b046e9eb1f6e 261 Pfam PF00950 ABC 3 transport family 1 257 1.6E-75 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VS_1827 56f16d89ff60249a2182ae108f9d1e63 165 SMART SM00448 4 125 5.0E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1827 56f16d89ff60249a2182ae108f9d1e63 165 Pfam PF00072 Response regulator receiver domain 6 125 3.4E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VS_1827 56f16d89ff60249a2182ae108f9d1e63 165 SUPERFAMILY SSF52172 1 155 5.69E-21 T 14-10-2018 IPR011006 CheY-like superfamily VS_1827 56f16d89ff60249a2182ae108f9d1e63 165 Gene3D G3DSA:3.40.50.2300 1 141 2.3E-19 T 14-10-2018 VS_II0935 423b1dd4c261d096044e5e6d0140ec53 631 Gene3D G3DSA:3.10.105.10 339 597 5.5E-224 T 14-10-2018 VS_II0935 423b1dd4c261d096044e5e6d0140ec53 631 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 126 534 9.1E-77 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II0935 423b1dd4c261d096044e5e6d0140ec53 631 SUPERFAMILY SSF53850 78 618 6.21E-114 T 14-10-2018 VS_II0935 423b1dd4c261d096044e5e6d0140ec53 631 PIRSF PIRSF002741 44 622 8.4E-124 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VS_II0935 423b1dd4c261d096044e5e6d0140ec53 631 Gene3D G3DSA:3.40.190.10 59 617 5.5E-224 T 14-10-2018 VS_3076 01ba540cc741225d216c4bbff35be9c9 103 Pfam PF12305 Protein of unknown function (DUF3630) 7 99 4.6E-38 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 VS_II0610 97bc11926013cfb25ed4fa2fb4370edc 427 PRINTS PR00075 Fatty acid desaturase family 1 signature 151 180 1.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VS_II0610 97bc11926013cfb25ed4fa2fb4370edc 427 PRINTS PR00075 Fatty acid desaturase family 1 signature 210 228 1.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VS_II0610 97bc11926013cfb25ed4fa2fb4370edc 427 PRINTS PR00075 Fatty acid desaturase family 1 signature 284 298 1.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VS_II0610 97bc11926013cfb25ed4fa2fb4370edc 427 PRINTS PR00075 Fatty acid desaturase family 1 signature 63 83 1.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VS_II0610 97bc11926013cfb25ed4fa2fb4370edc 427 PRINTS PR00075 Fatty acid desaturase family 1 signature 113 133 1.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VS_II0610 97bc11926013cfb25ed4fa2fb4370edc 427 PRINTS PR00075 Fatty acid desaturase family 1 signature 241 262 1.9E-28 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VS_II0610 97bc11926013cfb25ed4fa2fb4370edc 427 Pfam PF00487 Fatty acid desaturase 96 316 3.6E-22 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 VS_3010 f52717afde4b9cac955f3749f2f07e51 268 Pfam PF00665 Integrase core domain 111 223 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_3010 f52717afde4b9cac955f3749f2f07e51 268 Gene3D G3DSA:3.30.420.10 109 267 8.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_3010 f52717afde4b9cac955f3749f2f07e51 268 SUPERFAMILY SSF53098 108 263 4.7E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1333 5d59a750b933f434a20d0d7cf15d5b9e 173 Pfam PF05638 Type VI secretion system effector, Hcp 5 144 2.8E-19 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VS_1333 5d59a750b933f434a20d0d7cf15d5b9e 173 Gene3D G3DSA:2.30.110.20 2 168 3.0E-18 T 14-10-2018 IPR036624 Hcp1-like superfamily VS_1333 5d59a750b933f434a20d0d7cf15d5b9e 173 SUPERFAMILY SSF141452 1 167 8.5E-24 T 14-10-2018 IPR036624 Hcp1-like superfamily VS_2079 3e0ed6a26f06da0cb4e1af9b12dd553b 116 Pfam PF01230 HIT domain 13 109 9.4E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VS_2079 3e0ed6a26f06da0cb4e1af9b12dd553b 116 SUPERFAMILY SSF54197 2 113 1.84E-34 T 14-10-2018 IPR036265 HIT-like superfamily VS_2079 3e0ed6a26f06da0cb4e1af9b12dd553b 116 Gene3D G3DSA:3.30.428.10 1 111 2.4E-35 T 14-10-2018 IPR036265 HIT-like superfamily VS_2079 3e0ed6a26f06da0cb4e1af9b12dd553b 116 PRINTS PR00332 Histidine triad family signature 6 22 9.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VS_2079 3e0ed6a26f06da0cb4e1af9b12dd553b 116 PRINTS PR00332 Histidine triad family signature 27 45 9.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VS_2079 3e0ed6a26f06da0cb4e1af9b12dd553b 116 PRINTS PR00332 Histidine triad family signature 95 105 9.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VS_2079 3e0ed6a26f06da0cb4e1af9b12dd553b 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site VS_0913 91230fe500227b2cb51d1abd6ee2cf50 91 Pfam PF04304 Protein of unknown function (DUF454) 1 78 3.8E-18 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VS_1331 57dd95ff7882be08b4dbd4e973bdd1dc 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 491 2.1E-174 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VS_1331 57dd95ff7882be08b4dbd4e973bdd1dc 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 491 1.5E-165 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VS_1135 f9a6b5fd4e536936797d2dd126b64946 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 220 1.2E-9 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_1135 f9a6b5fd4e536936797d2dd126b64946 321 Gene3D G3DSA:3.40.50.1100 24 296 3.2E-22 T 14-10-2018 VS_1135 f9a6b5fd4e536936797d2dd126b64946 321 PIRSF PIRSF006278 11 311 2.5E-23 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VS_1135 f9a6b5fd4e536936797d2dd126b64946 321 SUPERFAMILY SSF53686 24 307 5.38E-51 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_1135 f9a6b5fd4e536936797d2dd126b64946 321 Gene3D G3DSA:3.40.50.1100 45 149 3.2E-22 T 14-10-2018 VS_II0341 105b12077ba42b9a1ac7b720a3df5185 205 PIRSF PIRSF006324 1 204 1.6E-41 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_II0341 105b12077ba42b9a1ac7b720a3df5185 205 Pfam PF01810 LysE type translocator 16 202 3.8E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_II0876 67771966b032cc4e56dde21776c491f8 320 SUPERFAMILY SSF53300 94 251 3.5E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VS_II0876 67771966b032cc4e56dde21776c491f8 320 Pfam PF01882 Protein of unknown function DUF58 58 143 4.6E-20 T 14-10-2018 IPR002881 Domain of unknown function DUF58 VS_1814 8c97995a21ef8456cacde5ce41946800 467 SUPERFAMILY SSF53383 95 463 4.98E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_1814 8c97995a21ef8456cacde5ce41946800 467 Gene3D G3DSA:1.10.10.10 1 68 5.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1814 8c97995a21ef8456cacde5ce41946800 467 Pfam PF00155 Aminotransferase class I and II 142 442 6.0E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_1814 8c97995a21ef8456cacde5ce41946800 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 5.3E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_1814 8c97995a21ef8456cacde5ce41946800 467 Gene3D G3DSA:3.40.640.10 137 356 5.6E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_1814 8c97995a21ef8456cacde5ce41946800 467 Gene3D G3DSA:3.90.1150.10 94 460 5.6E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_1814 8c97995a21ef8456cacde5ce41946800 467 SUPERFAMILY SSF46785 2 69 3.54E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_1814 8c97995a21ef8456cacde5ce41946800 467 SMART SM00345 7 66 1.5E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VS_II0829 22a47a2bcaa2306c873c8def9234511c 138 Gene3D G3DSA:2.170.150.70 5 122 2.7E-12 T 14-10-2018 VS_II0829 22a47a2bcaa2306c873c8def9234511c 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 119 9.5E-18 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VS_II0829 22a47a2bcaa2306c873c8def9234511c 138 SUPERFAMILY SSF51316 1 137 2.82E-38 T 14-10-2018 IPR011057 Mss4-like superfamily VS_II1117 a8fa43b63ee65f98277178ce6d225b23 151 SUPERFAMILY SSF54593 15 140 5.91E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II1117 a8fa43b63ee65f98277178ce6d225b23 151 Gene3D G3DSA:3.10.180.10 14 146 9.1E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II1117 a8fa43b63ee65f98277178ce6d225b23 151 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 118 1.6E-8 T 14-10-2018 VS_1604 3aef424075b4c434a35ad9adf4ca835f 161 Pfam PF00293 NUDIX domain 39 136 4.3E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_1604 3aef424075b4c434a35ad9adf4ca835f 161 SUPERFAMILY SSF55811 34 139 2.3E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_1604 3aef424075b4c434a35ad9adf4ca835f 161 Gene3D G3DSA:3.90.79.10 20 155 3.1E-21 T 14-10-2018 VS_2348 1e03381c030ef9b521d621ebfd99d3a6 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VS_2348 1e03381c030ef9b521d621ebfd99d3a6 280 Pfam PF01148 Cytidylyltransferase family 2 278 4.0E-71 T 14-10-2018 VS_II0504 89861842fb7cfb6a5d330579d8ed2548 270 Gene3D G3DSA:3.90.226.10 7 241 7.0E-59 T 14-10-2018 VS_II0504 89861842fb7cfb6a5d330579d8ed2548 270 SUPERFAMILY SSF52096 12 252 6.97E-59 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VS_II0504 89861842fb7cfb6a5d330579d8ed2548 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 223 2.9E-31 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VS_II0158 ce12240f0898836c8a655698932059a7 467 Pfam PF02264 LamB porin 89 467 1.2E-37 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VS_II0158 ce12240f0898836c8a655698932059a7 467 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 114 461 1.0E-126 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VS_II0158 ce12240f0898836c8a655698932059a7 467 Gene3D G3DSA:2.40.170.10 51 467 1.3E-35 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VS_II0158 ce12240f0898836c8a655698932059a7 467 SUPERFAMILY SSF56935 52 467 2.93E-80 T 14-10-2018 VS_II0481 e5a1742c16893bd317f68f858862d657 188 Pfam PF00691 OmpA family 89 179 2.7E-15 T 14-10-2018 IPR006665 OmpA-like domain VS_II0481 e5a1742c16893bd317f68f858862d657 188 Gene3D G3DSA:3.30.1330.60 63 186 1.2E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_II0481 e5a1742c16893bd317f68f858862d657 188 SUPERFAMILY SSF103088 79 186 1.24E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_II0481 e5a1742c16893bd317f68f858862d657 188 PRINTS PR01021 OMPA domain signature 131 147 7.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II0481 e5a1742c16893bd317f68f858862d657 188 PRINTS PR01021 OMPA domain signature 116 131 7.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VS_II1089 79e2c878c3660473a455ff35d9e8a9b6 252 Gene3D G3DSA:3.40.50.300 6 231 2.2E-56 T 14-10-2018 VS_II1089 79e2c878c3660473a455ff35d9e8a9b6 252 Pfam PF00005 ABC transporter 25 167 7.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_II1089 79e2c878c3660473a455ff35d9e8a9b6 252 SMART SM00382 34 214 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_II1089 79e2c878c3660473a455ff35d9e8a9b6 252 SUPERFAMILY SSF52540 7 213 1.82E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II1089 79e2c878c3660473a455ff35d9e8a9b6 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2521 4e8b5c13fdf8d351fd3b8944a7e0f67b 127 Hamap MF_01053 UPF0231 protein YacL [yacL]. 6 127 27.444 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VS_2521 4e8b5c13fdf8d351fd3b8944a7e0f67b 127 PIRSF PIRSF006287 6 127 1.2E-42 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VS_2521 4e8b5c13fdf8d351fd3b8944a7e0f67b 127 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 6 125 6.0E-39 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VS_2521 4e8b5c13fdf8d351fd3b8944a7e0f67b 127 Pfam PF06062 Uncharacterised protein family (UPF0231) 6 125 3.0E-40 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VS_0794 bb88617145e6512937e10ed4ad3baf7e 143 Pfam PF02169 LPP20 lipoprotein 28 118 1.3E-7 T 14-10-2018 IPR024952 Lipoprotein LPP20-like VS_0794 bb88617145e6512937e10ed4ad3baf7e 143 PIRSF PIRSF028687 1 143 2.6E-59 T 14-10-2018 IPR007293 Flagellar protein FlgP VS_1350 2750d7b03f4566e729fd8dd29b847de8 159 Gene3D G3DSA:3.40.630.30 5 158 3.5E-31 T 14-10-2018 VS_1350 2750d7b03f4566e729fd8dd29b847de8 159 SUPERFAMILY SSF55729 1 148 1.18E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1350 2750d7b03f4566e729fd8dd29b847de8 159 Pfam PF00583 Acetyltransferase (GNAT) family 25 145 1.4E-13 T 14-10-2018 IPR000182 GNAT domain VS_0411 1c167252ab2dd4ebc053a9639b542056 420 Pfam PF01384 Phosphate transporter family 26 407 6.9E-113 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VS_II0699 3140220886d9f102a78782d004b65bd2 118 SUPERFAMILY SSF46894 44 117 6.8E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0699 3140220886d9f102a78782d004b65bd2 118 SMART SM00862 45 116 7.0E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0699 3140220886d9f102a78782d004b65bd2 118 Pfam PF00486 Transcriptional regulatory protein, C terminal 51 116 3.3E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0699 3140220886d9f102a78782d004b65bd2 118 Gene3D G3DSA:1.10.10.10 23 118 1.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0554 2e46cd78e21bf8401fca4c0c86c4608a 563 Pfam PF00849 RNA pseudouridylate synthase 369 516 3.6E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_II0554 2e46cd78e21bf8401fca4c0c86c4608a 563 SUPERFAMILY SSF55120 358 560 8.0E-57 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_II0554 2e46cd78e21bf8401fca4c0c86c4608a 563 Gene3D G3DSA:3.30.2350.10 352 563 3.9E-60 T 14-10-2018 VS_II0554 2e46cd78e21bf8401fca4c0c86c4608a 563 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 407 421 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1512 861c0baa2975f15798d2ec075da039ab 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 7.6E-45 T 14-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VS_1697 8b2c9962d3bb61104728ba9cce7d827f 342 PIRSF PIRSF017020 4 336 3.0E-120 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VS_1697 8b2c9962d3bb61104728ba9cce7d827f 342 Gene3D G3DSA:3.40.630.10 1 342 3.8E-116 T 14-10-2018 VS_1697 8b2c9962d3bb61104728ba9cce7d827f 342 SUPERFAMILY SSF53187 9 329 7.33E-76 T 14-10-2018 VS_1697 8b2c9962d3bb61104728ba9cce7d827f 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 6.6E-67 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VS_1697 8b2c9962d3bb61104728ba9cce7d827f 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 130.965 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VS_II1322 1e5120d912d67f2853e8d9580f4f5e5e 146 Gene3D G3DSA:3.40.930.10 1 145 2.3E-29 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_II1322 1e5120d912d67f2853e8d9580f4f5e5e 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 3.3E-29 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VS_II1322 1e5120d912d67f2853e8d9580f4f5e5e 146 SUPERFAMILY SSF55804 1 145 6.02E-28 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VS_1408 98218a1bcbade60b04f901c44df469a6 161 Gene3D G3DSA:3.10.129.10 3 155 1.6E-26 T 14-10-2018 VS_1408 98218a1bcbade60b04f901c44df469a6 161 SUPERFAMILY SSF54637 12 158 1.32E-17 T 14-10-2018 IPR029069 HotDog domain superfamily VS_1408 98218a1bcbade60b04f901c44df469a6 161 Pfam PF14539 Domain of unknown function (DUF4442) 12 107 8.9E-8 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VS_II0886 e3bb7f3c44755e2730aca9462b2c2007 167 Pfam PF10688 Bacterial inner membrane protein 6 162 7.7E-48 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VS_II0886 e3bb7f3c44755e2730aca9462b2c2007 167 PIRSF PIRSF011443 1 167 2.0E-54 T 14-10-2018 IPR026267 Inner membrane protein YgjV VS_1241 b43679688b2d80fbe9dd5722f4d1190d 589 Gene3D G3DSA:1.20.1730.10 20 481 6.0E-83 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VS_1241 b43679688b2d80fbe9dd5722f4d1190d 589 Pfam PF00474 Sodium:solute symporter family 32 420 6.6E-41 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VS_0954 8304d638bf269b6f56c1ac23dd417e7f 478 Pfam PF03553 Na+/H+ antiporter family 161 453 1.5E-64 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VS_0954 8304d638bf269b6f56c1ac23dd417e7f 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 3.2E-162 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VS_II0900 d96142ca9f7a960eb07164531fc7f43e 245 Pfam PF12525 Protein of unknown function (DUF3726) 3 80 1.3E-32 T 14-10-2018 IPR022201 Protein of unknown function DUF3726 VS_II1280 23a0247e6c1598ba6db8552ed3814b64 118 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.4E-13 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VS_II1280 23a0247e6c1598ba6db8552ed3814b64 118 Gene3D G3DSA:3.30.160.100 1 104 2.6E-18 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VS_II1280 23a0247e6c1598ba6db8552ed3814b64 118 SUPERFAMILY SSF69754 2 101 6.67E-24 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VS_II1280 23a0247e6c1598ba6db8552ed3814b64 118 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.9E-16 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VS_0412 7bcfc1231426beb964482203563fac69 228 Gene3D G3DSA:1.20.58.220 2 227 9.6E-64 T 14-10-2018 IPR038078 PhoU-like domain superfamily VS_0412 7bcfc1231426beb964482203563fac69 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 5.9E-67 T 14-10-2018 IPR002727 Protein of unknown function DUF47 VS_0412 7bcfc1231426beb964482203563fac69 228 SUPERFAMILY SSF109755 31 219 1.19E-15 T 14-10-2018 VS_0412 7bcfc1231426beb964482203563fac69 228 Pfam PF01865 Protein of unknown function DUF47 9 225 9.1E-65 T 14-10-2018 IPR018445 Putative phosphate transport regulator VS_2085 46affd762ec64d6adb6f4634cb7331d5 138 SMART SM00116 13 61 0.0069 T 14-10-2018 IPR000644 CBS domain VS_2085 46affd762ec64d6adb6f4634cb7331d5 138 SMART SM00116 80 127 2.3E-6 T 14-10-2018 IPR000644 CBS domain VS_2085 46affd762ec64d6adb6f4634cb7331d5 138 Gene3D G3DSA:3.10.580.10 1 128 1.0E-29 T 14-10-2018 VS_2085 46affd762ec64d6adb6f4634cb7331d5 138 SUPERFAMILY SSF54631 1 126 1.89E-33 T 14-10-2018 VS_2085 46affd762ec64d6adb6f4634cb7331d5 138 Pfam PF00571 CBS domain 6 61 8.6E-11 T 14-10-2018 IPR000644 CBS domain VS_2085 46affd762ec64d6adb6f4634cb7331d5 138 Pfam PF00571 CBS domain 73 126 3.0E-10 T 14-10-2018 IPR000644 CBS domain VS_2997 b8e02da355692897931beabafbe14be6 225 Gene3D G3DSA:3.90.1490.10 149 222 2.0E-7 T 14-10-2018 VS_2997 b8e02da355692897931beabafbe14be6 225 Gene3D G3DSA:3.40.50.620 3 147 3.4E-18 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VS_2997 b8e02da355692897931beabafbe14be6 225 SUPERFAMILY SSF52402 5 222 5.67E-56 T 14-10-2018 VS_2997 b8e02da355692897931beabafbe14be6 225 Pfam PF01902 Diphthamide synthase 8 217 4.1E-25 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 VS_0876 c6f0a36244e13c8255b6eec12321df55 312 Gene3D G3DSA:1.10.3720.10 69 310 4.1E-54 T 14-10-2018 IPR035906 MetI-like superfamily VS_0876 c6f0a36244e13c8255b6eec12321df55 312 SUPERFAMILY SSF161098 73 299 7.19E-46 T 14-10-2018 IPR035906 MetI-like superfamily VS_0876 c6f0a36244e13c8255b6eec12321df55 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 300 1.7E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0408 42be30e6589e2d8292e452c9001c005a 165 SUPERFAMILY SSF52540 3 163 7.11E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0408 42be30e6589e2d8292e452c9001c005a 165 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 162 4.0E-53 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VS_II0408 42be30e6589e2d8292e452c9001c005a 165 Pfam PF01202 Shikimate kinase 12 161 3.1E-17 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VS_II0408 42be30e6589e2d8292e452c9001c005a 165 Gene3D G3DSA:3.40.50.300 1 164 2.3E-56 T 14-10-2018 VS_II1445 3165d6bcec6899e9ac9e0f9957841c24 392 Pfam PF04932 O-Antigen ligase 179 332 1.5E-17 T 14-10-2018 IPR007016 O-antigen ligase-related VS_II0562 8490f2584e39d8e548dcf7345add1525 145 Pfam PF13417 Glutathione S-transferase, N-terminal domain 69 144 4.4E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VS_II0562 8490f2584e39d8e548dcf7345add1525 145 Gene3D G3DSA:3.40.30.10 47 144 1.5E-14 T 14-10-2018 VS_II0562 8490f2584e39d8e548dcf7345add1525 145 SUPERFAMILY SSF52833 66 144 1.73E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0946 d3ce13d25691910e2ecc2c566580f51f 395 Pfam PF05940 NnrS protein 17 394 3.7E-106 T 14-10-2018 IPR010266 NnrS VS_2380 e85ca32e1623b69943d3c3d02b74ef87 113 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 37 109 6.6E-16 T 14-10-2018 IPR018660 C-type lysozyme inhibitor VS_2380 e85ca32e1623b69943d3c3d02b74ef87 113 SUPERFAMILY SSF141488 32 111 1.57E-11 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VS_2380 e85ca32e1623b69943d3c3d02b74ef87 113 Gene3D G3DSA:2.40.128.200 31 113 1.8E-13 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VS_II0961 82181c605d1c19ee8e0f7f79482af4f9 257 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 48 182 3.1E-15 T 14-10-2018 IPR032871 AHH domain-containing protein VS_2595 b07d67892d4750e79a99f02c7bba3a6e 266 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 8 74 6.6E-15 T 14-10-2018 IPR002831 Transcription regulator TrmB, N-terminal VS_2595 b07d67892d4750e79a99f02c7bba3a6e 266 SUPERFAMILY SSF46785 4 83 6.72E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2595 b07d67892d4750e79a99f02c7bba3a6e 266 Pfam PF11495 Archaeal transcriptional regulator TrmB 108 214 5.2E-8 T 14-10-2018 IPR021586 Transcription regulator TrmB, C-terminal VS_2595 b07d67892d4750e79a99f02c7bba3a6e 266 Gene3D G3DSA:1.10.10.10 1 101 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_2122 eff520d9f2317617d3d63878d7293854 423 SUPERFAMILY SSF53474 197 407 2.09E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2122 eff520d9f2317617d3d63878d7293854 423 Gene3D G3DSA:3.40.50.1820 200 418 2.8E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2122 eff520d9f2317617d3d63878d7293854 423 Pfam PF12695 Alpha/beta hydrolase family 204 283 3.4E-9 T 14-10-2018 IPR029059 Alpha/beta hydrolase fold-5 VS_2325 0c0244908e53385caf44ae5879c9ce9b 154 SUPERFAMILY SSF53098 3 143 5.18E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2325 0c0244908e53385caf44ae5879c9ce9b 154 Gene3D G3DSA:3.30.420.10 1 154 1.1E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_2325 0c0244908e53385caf44ae5879c9ce9b 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 36.32 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 VS_2325 0c0244908e53385caf44ae5879c9ce9b 154 Pfam PF00075 RNase H 3 141 4.4E-52 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VS_II1389 6214560dbce31dfde2caa2cfe150c78a 297 SUPERFAMILY SSF161098 28 297 4.49E-62 T 14-10-2018 IPR035906 MetI-like superfamily VS_II1389 6214560dbce31dfde2caa2cfe150c78a 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 280 5.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II1389 6214560dbce31dfde2caa2cfe150c78a 297 Gene3D G3DSA:1.10.3720.10 23 288 1.4E-56 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0014 caea9f22997d2604100742b235b4831c 609 Pfam PF03781 Sulfatase-modifying factor enzyme 1 386 607 2.2E-48 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VS_II0014 caea9f22997d2604100742b235b4831c 609 Gene3D G3DSA:3.90.1580.10 386 608 1.4E-50 T 14-10-2018 VS_II0014 caea9f22997d2604100742b235b4831c 609 Pfam PF08308 PEGA domain 300 363 1.8E-19 T 14-10-2018 IPR013229 PEGA VS_II0014 caea9f22997d2604100742b235b4831c 609 SUPERFAMILY SSF56436 386 608 4.47E-53 T 14-10-2018 IPR016187 C-type lectin fold VS_II0201 e0de0d2dde8f08df235c9484e8c594e8 427 SUPERFAMILY SSF52266 157 419 1.83E-21 T 14-10-2018 VS_II0201 e0de0d2dde8f08df235c9484e8c594e8 427 Gene3D G3DSA:3.40.50.1110 144 421 2.1E-37 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VS_II0201 e0de0d2dde8f08df235c9484e8c594e8 427 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 158 417 3.9E-16 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.4E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.4E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.4E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.4E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.5E-75 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.4E-66 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VS_0103 91452a4381d7380a47507ba7c7c78ee9 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 240 15.994 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VS_2981 f20aadc3834c97658a581222bc790441 143 SUPERFAMILY SSF55729 6 121 1.95E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2981 f20aadc3834c97658a581222bc790441 143 Gene3D G3DSA:3.40.630.30 13 135 3.2E-10 T 14-10-2018 VS_2981 f20aadc3834c97658a581222bc790441 143 Pfam PF13508 Acetyltransferase (GNAT) domain 36 109 8.6E-9 T 14-10-2018 IPR000182 GNAT domain VS_3088 c88b72f36ea01375e9916658533b2190 152 Pfam PF07681 DoxX 28 109 5.7E-19 T 14-10-2018 IPR032808 DoxX family VS_II1075 ee53d69246a97d07ff5df4db81d9b0cc 339 Pfam PF11168 Protein of unknown function (DUF2955) 14 153 2.0E-36 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VS_1589 33499e2d8e4baeb055509dbd8c410d41 141 Gene3D G3DSA:3.10.180.10 5 141 1.4E-54 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_1589 33499e2d8e4baeb055509dbd8c410d41 141 SUPERFAMILY SSF54593 13 140 2.26E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_0212 fca73b624ed7ec8c4c59018473d8ef90 755 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 54 742 1.3E-256 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VS_0862 e94e1366ae31df42c3ff3affbee482fc 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 238 1.2E-84 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 VS_II0123 2730e88d9fa03cdeee92a000a56711ec 402 Pfam PF06224 Winged helix DNA-binding domain 42 371 1.2E-78 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 VS_0443 daa9cf7c540f9673feea54d5d5e35cef 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 15.428 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VS_0443 daa9cf7c540f9673feea54d5d5e35cef 105 Pfam PF04999 Cell division protein FtsL 8 103 1.8E-35 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VS_0443 daa9cf7c540f9673feea54d5d5e35cef 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 102 3.6E-24 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VS_1912 dc19ef8e271ad2765b5843de28a7dd45 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 2.0E-104 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_1912 dc19ef8e271ad2765b5843de28a7dd45 427 PIRSF PIRSF006066 1 426 3.4E-72 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VS_1912 dc19ef8e271ad2765b5843de28a7dd45 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 422 3.2E-99 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VS_II0324 f06fd67b17fd7b9c329e784e342a689e 200 Gene3D G3DSA:2.170.170.11 18 134 2.8E-28 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_II0324 f06fd67b17fd7b9c329e784e342a689e 200 SUPERFAMILY SSF51645 20 196 4.32E-19 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VS_3039 6f2483bfe805c43bd63c7403120b78a8 155 Pfam PF01878 EVE domain 2 148 5.6E-55 T 14-10-2018 IPR002740 EVE domain VS_3039 6f2483bfe805c43bd63c7403120b78a8 155 Gene3D G3DSA:3.10.590.10 1 151 2.0E-64 T 14-10-2018 VS_3039 6f2483bfe805c43bd63c7403120b78a8 155 SUPERFAMILY SSF88697 1 148 2.2E-61 T 14-10-2018 IPR015947 PUA-like superfamily VS_II0288 de945a4964b4f233a72cf94225c08c78 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 96 194 2.1E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VS_II0048 611ab281842c0e9944b4a9a77f00fd23 399 SUPERFAMILY SSF53686 47 397 7.86E-65 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VS_II0048 611ab281842c0e9944b4a9a77f00fd23 399 Gene3D G3DSA:3.40.50.1100 82 205 2.5E-131 T 14-10-2018 VS_II0048 611ab281842c0e9944b4a9a77f00fd23 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 45 381 5.5E-65 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VS_II0048 611ab281842c0e9944b4a9a77f00fd23 399 Gene3D G3DSA:3.40.50.1100 43 395 2.5E-131 T 14-10-2018 VS_II0048 611ab281842c0e9944b4a9a77f00fd23 399 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 34 395 1.4E-96 T 14-10-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 Pfam PF00463 Isocitrate lyase family 99 270 5.0E-19 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 Pfam PF00463 Isocitrate lyase family 318 394 1.7E-13 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 Pfam PF00463 Isocitrate lyase family 433 531 5.0E-13 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 PIRSF PIRSF001362 1 279 7.3E-27 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 PIRSF PIRSF001362 421 532 3.6E-6 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 PIRSF PIRSF001362 292 408 3.9E-15 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 SUPERFAMILY SSF51621 9 515 2.62E-123 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VS_II0264 5d29530e08a22cb877af8dead8ae938a 532 Gene3D G3DSA:3.20.20.60 414 532 1.5E-20 T 14-10-2018 VS_2535 475e0064193edfa8967e0629a5c6e961 305 SMART SM00382 29 213 8.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_2535 475e0064193edfa8967e0629a5c6e961 305 Gene3D G3DSA:3.40.50.300 1 236 2.3E-65 T 14-10-2018 VS_2535 475e0064193edfa8967e0629a5c6e961 305 SUPERFAMILY SSF52540 3 227 5.85E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2535 475e0064193edfa8967e0629a5c6e961 305 Pfam PF00005 ABC transporter 20 164 7.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VS_2535 475e0064193edfa8967e0629a5c6e961 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VS_2303 c9a76c039fa0d84dcc75977bbf650db3 69 Pfam PF11446 Protein of unknown function (DUF2897) 4 55 3.6E-20 T 14-10-2018 IPR021550 Protein of unknown function DUF2897 VS_2356 56de714a1c026bd58fbf2aa5363e1fcc 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.339 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VS_2356 56de714a1c026bd58fbf2aa5363e1fcc 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 5.0E-58 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VS_2356 56de714a1c026bd58fbf2aa5363e1fcc 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 9.7E-55 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VS_II0964 85a2db8466ed2be9f0b433c7d4ea72bf 201 Pfam PF13665 Domain of unknown function (DUF4150) 4 68 1.5E-18 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_2783 ae6c9c6f0a5f397ec5126712e62d4c1f 419 Pfam PF12704 MacB-like periplasmic core domain 20 260 2.6E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VS_2783 ae6c9c6f0a5f397ec5126712e62d4c1f 419 Pfam PF02687 FtsX-like permease family 317 410 6.0E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_II1415 1d59405a680c7b9880daa03d64a60386 290 SUPERFAMILY SSF53474 27 280 2.17E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II1415 1d59405a680c7b9880daa03d64a60386 290 Gene3D G3DSA:3.40.50.1820 73 285 9.8E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II1415 1d59405a680c7b9880daa03d64a60386 290 Pfam PF12146 Serine aminopeptidase, S33 91 200 2.7E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VS_2035 66f1eed00648f6422c814ed578577d21 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.324 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VS_2035 66f1eed00648f6422c814ed578577d21 287 Pfam PF01435 Peptidase family M48 78 287 1.8E-39 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VS_2035 66f1eed00648f6422c814ed578577d21 287 Gene3D G3DSA:3.30.2010.10 68 161 2.4E-37 T 14-10-2018 VS_II1039 4e653c48943a35bd0aba01ca3cd9dfd6 308 SUPERFAMILY SSF90123 22 294 6.8E-19 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II1039 4e653c48943a35bd0aba01ca3cd9dfd6 308 Gene3D G3DSA:1.20.1560.10 21 297 2.4E-8 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VS_II1039 4e653c48943a35bd0aba01ca3cd9dfd6 308 Pfam PF13748 ABC transporter transmembrane region 22 256 1.1E-89 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VS_II1405 25dbfe8631169618f0c60ec07bd46017 85 Pfam PF04325 Protein of unknown function (DUF465) 29 75 5.6E-11 T 14-10-2018 IPR007420 Protein of unknown function DUF465 VS_II1405 25dbfe8631169618f0c60ec07bd46017 85 Gene3D G3DSA:1.20.58.660 11 83 1.9E-11 T 14-10-2018 VS_0187 99422920c246aa43520a37a8e5d15f0a 316 Pfam PF05686 Glycosyl transferase family 90 134 279 6.1E-14 T 14-10-2018 IPR006598 Lipopolysaccharide-modifying protein VS_0187 99422920c246aa43520a37a8e5d15f0a 316 SMART SM00672 72 305 2.7E-4 T 14-10-2018 IPR006598 Lipopolysaccharide-modifying protein VS_II0476 644e416d19b86ff875ed470044da8ad9 288 Pfam PF00482 Type II secretion system (T2SS), protein F 152 278 1.3E-15 T 14-10-2018 IPR018076 Type II secretion system F domain VS_2180 288e5d08030ce1e1c00c68ecd45d5ed6 307 Pfam PF04280 Tim44-like domain 185 306 7.8E-16 T 14-10-2018 IPR007379 Tim44-like domain VS_2180 288e5d08030ce1e1c00c68ecd45d5ed6 307 SUPERFAMILY SSF54427 186 306 1.27E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily VS_2180 288e5d08030ce1e1c00c68ecd45d5ed6 307 Gene3D G3DSA:3.10.450.240 182 306 5.9E-6 T 14-10-2018 VS_2180 288e5d08030ce1e1c00c68ecd45d5ed6 307 SMART SM00978 176 307 4.1E-37 T 14-10-2018 IPR007379 Tim44-like domain VS_2094 0b3985867a9919bb5a0852b96174dfc3 300 SUPERFAMILY SSF103481 196 298 4.32E-11 T 14-10-2018 VS_2094 0b3985867a9919bb5a0852b96174dfc3 300 SUPERFAMILY SSF103481 55 155 1.44E-9 T 14-10-2018 VS_2094 0b3985867a9919bb5a0852b96174dfc3 300 Pfam PF00892 EamA-like transporter family 163 292 2.4E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_2094 0b3985867a9919bb5a0852b96174dfc3 300 Pfam PF00892 EamA-like transporter family 19 151 2.9E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_0596 9a4ad437184e3c3738799d2aab88f01c 166 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 154 2.9E-10 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VS_0600 70861c19e1fffa512f585fce9cb5da71 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 6.1E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC VS_0600 70861c19e1fffa512f585fce9cb5da71 109 SMART SM01323 17 101 6.6E-37 T 14-10-2018 IPR003849 Preprotein translocase YajC VS_0600 70861c19e1fffa512f585fce9cb5da71 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 1.0E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC VS_0600 70861c19e1fffa512f585fce9cb5da71 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 1.0E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC VS_0600 70861c19e1fffa512f585fce9cb5da71 109 Pfam PF02699 Preprotein translocase subunit 21 98 1.2E-25 T 14-10-2018 IPR003849 Preprotein translocase YajC VS_2770 67ed47a674918811295ce52d7049341d 452 Pfam PF08245 Mur ligase middle domain 108 291 1.4E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VS_2770 67ed47a674918811295ce52d7049341d 452 Gene3D G3DSA:3.90.190.20 314 449 2.9E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_2770 67ed47a674918811295ce52d7049341d 452 Gene3D G3DSA:3.40.1190.10 91 313 2.2E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_2770 67ed47a674918811295ce52d7049341d 452 Gene3D G3DSA:3.40.50.720 1 90 7.6E-36 T 14-10-2018 VS_2770 67ed47a674918811295ce52d7049341d 452 SUPERFAMILY SSF53244 311 446 2.88E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VS_2770 67ed47a674918811295ce52d7049341d 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 58.787 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VS_2770 67ed47a674918811295ce52d7049341d 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 380 5.0E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VS_2770 67ed47a674918811295ce52d7049341d 452 SUPERFAMILY SSF53623 97 308 1.28E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VS_2770 67ed47a674918811295ce52d7049341d 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 6.6E-255 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VS_2770 67ed47a674918811295ce52d7049341d 452 SUPERFAMILY SSF51984 1 89 4.58E-23 T 14-10-2018 VS_2770 67ed47a674918811295ce52d7049341d 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.5E-20 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VS_1588 65a526301408cb7af4db0fc65ae3111a 144 Gene3D G3DSA:3.40.630.30 2 137 7.8E-37 T 14-10-2018 VS_1588 65a526301408cb7af4db0fc65ae3111a 144 Pfam PF00583 Acetyltransferase (GNAT) family 35 125 1.7E-14 T 14-10-2018 IPR000182 GNAT domain VS_1588 65a526301408cb7af4db0fc65ae3111a 144 SUPERFAMILY SSF55729 3 135 2.57E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_II0169 3f0c45ae72180d99667c591022bcd54d 129 Pfam PF06961 Protein of unknown function (DUF1294) 38 91 1.4E-24 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 VS_0999 f0697561768fbf3c1309ac65018e7d04 150 Pfam PF04217 Protein of unknown function, DUF412 9 146 1.4E-58 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VS_0999 f0697561768fbf3c1309ac65018e7d04 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.545 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VS_0101 69b24e1c15a54c4528215b387f0825aa 84 Pfam PF02416 mttA/Hcf106 family 4 55 4.3E-14 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VS_0101 69b24e1c15a54c4528215b387f0825aa 84 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.3E-21 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VS_0101 69b24e1c15a54c4528215b387f0825aa 84 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 83 25.547 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VS_II0367 fb9ca02d2f7d467344d30c4a3ae52ec2 224 Gene3D G3DSA:2.60.370.10 73 205 1.8E-41 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0367 fb9ca02d2f7d467344d30c4a3ae52ec2 224 PIRSF PIRSF005413 6 207 9.9E-65 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0367 fb9ca02d2f7d467344d30c4a3ae52ec2 224 SUPERFAMILY SSF110111 72 192 5.23E-44 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_II0367 fb9ca02d2f7d467344d30c4a3ae52ec2 224 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 45 189 1.0E-46 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VS_0077 7f4a95cae2294cd857bf9f85614575db 312 SUPERFAMILY SSF161098 93 295 2.09E-24 T 14-10-2018 IPR035906 MetI-like superfamily VS_0077 7f4a95cae2294cd857bf9f85614575db 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 2.9E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VS_0077 7f4a95cae2294cd857bf9f85614575db 312 Gene3D G3DSA:1.10.3720.10 86 306 2.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily VS_0077 7f4a95cae2294cd857bf9f85614575db 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 2.7E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1581 86e5af5ba61f674505511739cdd8d48d 154 SUPERFAMILY SSF103247 25 147 1.07E-35 T 14-10-2018 IPR035923 TT1751-like domain superfamily VS_1581 86e5af5ba61f674505511739cdd8d48d 154 Gene3D G3DSA:3.30.310.70 26 148 3.8E-15 T 14-10-2018 IPR035923 TT1751-like domain superfamily VS_1581 86e5af5ba61f674505511739cdd8d48d 154 Pfam PF03625 Domain of unknown function DUF302 57 119 6.2E-21 T 14-10-2018 IPR005180 Domain of unknown function DUF302 VS_2687 1328645cac83e931c430845c7ea09679 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 8.7E-48 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 VS_2687 1328645cac83e931c430845c7ea09679 143 Gene3D G3DSA:2.60.40.3340 14 143 8.7E-40 T 14-10-2018 VS_2784 6ad2456b6502e5e97f1311b8d09c50e7 159 Pfam PF11736 Protein of unknown function (DUF3299) 24 154 1.1E-43 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 VS_2784 6ad2456b6502e5e97f1311b8d09c50e7 159 Gene3D G3DSA:2.40.50.870 18 159 1.3E-45 T 14-10-2018 VS_II0569 ab27e356419bef906375462c9f00bd4f 165 Pfam PF01810 LysE type translocator 3 163 4.6E-22 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_1586 4d00cc0fde687b1fd8a26168a65a1bef 156 SUPERFAMILY SSF55729 1 141 1.8E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1586 4d00cc0fde687b1fd8a26168a65a1bef 156 Gene3D G3DSA:3.40.630.30 1 155 1.7E-20 T 14-10-2018 VS_1586 4d00cc0fde687b1fd8a26168a65a1bef 156 Pfam PF00583 Acetyltransferase (GNAT) family 34 133 1.1E-8 T 14-10-2018 IPR000182 GNAT domain VS_3075 fa22b1f119eb986527ad77f7cd740214 240 Hamap MF_02088 Probable queuosine precursor transporter. 24 231 15.469 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VS_3075 fa22b1f119eb986527ad77f7cd740214 240 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 30 221 8.8E-63 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VS_3075 fa22b1f119eb986527ad77f7cd740214 240 Pfam PF02592 Putative vitamin uptake transporter 60 216 5.9E-38 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VS_1653 a01b4a269e354b7e9b1744b37753013a 146 Gene3D G3DSA:3.30.420.10 4 144 8.5E-21 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_1653 a01b4a269e354b7e9b1744b37753013a 146 SUPERFAMILY SSF53098 16 126 3.92E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_1653 a01b4a269e354b7e9b1744b37753013a 146 Pfam PF00075 RNase H 18 127 9.5E-14 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VS_II0694 e2be4eaa405fbaae460d85dd4acb15b3 76 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 3.0E-22 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 VS_1535 f2728efecc6dbd9865f9699d6a3488c7 219 Pfam PF02397 Bacterial sugar transferase 21 214 4.3E-63 T 14-10-2018 IPR003362 Bacterial sugar transferase VS_0337 711f293cc5aad4d8fbe7d2867da945ba 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 35 4.3E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0337 711f293cc5aad4d8fbe7d2867da945ba 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 35 1.9E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0337 711f293cc5aad4d8fbe7d2867da945ba 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0822 3c115c313f64a28e68c6ad8ce3a1bd33 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.668 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VS_0822 3c115c313f64a28e68c6ad8ce3a1bd33 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 27 102 1.2E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VS_0822 3c115c313f64a28e68c6ad8ce3a1bd33 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 8.2E-29 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VS_0822 3c115c313f64a28e68c6ad8ce3a1bd33 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 8.8E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VS_0822 3c115c313f64a28e68c6ad8ce3a1bd33 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 8.8E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VS_0822 3c115c313f64a28e68c6ad8ce3a1bd33 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 8.8E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 Pfam PF01047 MarR family 35 92 1.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 SMART SM00347 28 128 5.8E-29 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 3.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 SUPERFAMILY SSF46785 5 141 4.26E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VS_2093 d0e568888d7c5e9d77d678c2ebc91a57 142 Gene3D G3DSA:1.10.10.10 1 142 2.0E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_1100 80c294fc9e3ae3da745ffeb861f9529c 265 Pfam PF05618 Putative ATP-dependant zinc protease 127 262 4.5E-48 T 14-10-2018 VS_1100 80c294fc9e3ae3da745ffeb861f9529c 265 Gene3D G3DSA:2.40.70.10 125 254 7.2E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_1100 80c294fc9e3ae3da745ffeb861f9529c 265 SUPERFAMILY SSF50630 127 261 1.8E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VS_II0811 a58a7394863d384034430ad8cee53dc8 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 192 1.8E-26 T 14-10-2018 VS_II0811 a58a7394863d384034430ad8cee53dc8 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 192 1.2E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VS_II0811 a58a7394863d384034430ad8cee53dc8 205 SUPERFAMILY SSF56784 12 198 1.32E-42 T 14-10-2018 IPR036412 HAD-like superfamily VS_II0811 a58a7394863d384034430ad8cee53dc8 205 Gene3D G3DSA:1.10.150.240 25 95 1.7E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_II0811 a58a7394863d384034430ad8cee53dc8 205 Gene3D G3DSA:3.40.50.1000 14 195 1.7E-43 T 14-10-2018 IPR023214 HAD superfamily VS_II0811 a58a7394863d384034430ad8cee53dc8 205 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 12 192 2.4E-56 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VS_1321 a253e268f2df29a0780288489713f682 159 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 11 143 1.6E-29 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VS_1321 a253e268f2df29a0780288489713f682 159 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 144 4.7E-29 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VS_1321 a253e268f2df29a0780288489713f682 159 Gene3D G3DSA:2.60.40.4150 25 154 6.0E-26 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VS_0196 83b5814aa2c22dd0a393633217c4cc07 318 Gene3D G3DSA:3.40.50.2000 116 288 2.6E-52 T 14-10-2018 VS_0196 83b5814aa2c22dd0a393633217c4cc07 318 Gene3D G3DSA:3.40.50.2000 6 294 2.6E-52 T 14-10-2018 VS_0196 83b5814aa2c22dd0a393633217c4cc07 318 SUPERFAMILY SSF53756 8 297 8.17E-38 T 14-10-2018 VS_0196 83b5814aa2c22dd0a393633217c4cc07 318 Pfam PF00534 Glycosyl transferases group 1 125 275 3.3E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VS_1924 0f4a29b3ee989a797c66afa5596d0b4c 211 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 13 211 36.821 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VS_1924 0f4a29b3ee989a797c66afa5596d0b4c 211 Gene3D G3DSA:3.40.50.10990 18 187 1.1E-62 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VS_1924 0f4a29b3ee989a797c66afa5596d0b4c 211 Pfam PF00925 GTP cyclohydrolase II 32 184 4.4E-58 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VS_1924 0f4a29b3ee989a797c66afa5596d0b4c 211 SUPERFAMILY SSF142695 32 185 1.19E-52 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VS_II0117 24608f3889daaa508ecaa62653d89399 143 Pfam PF05232 Chlorhexidine efflux transporter 1 62 9.6E-21 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter VS_II0117 24608f3889daaa508ecaa62653d89399 143 Pfam PF05232 Chlorhexidine efflux transporter 69 131 1.7E-21 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter VS_2503 dec8400768632b0c969fb9bf94df884a 361 Pfam PF01594 AI-2E family transporter 13 347 4.2E-52 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VS_II1194 4896d1c0eb573254e961e2397323b4fc 145 SUPERFAMILY SSF53927 2 141 1.27E-39 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VS_II1194 4896d1c0eb573254e961e2397323b4fc 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 91 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VS_II1194 4896d1c0eb573254e961e2397323b4fc 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 103 4.7E-18 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VS_II1194 4896d1c0eb573254e961e2397323b4fc 145 Gene3D G3DSA:3.40.140.10 1 144 1.5E-39 T 14-10-2018 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00691 Adhesin B signature 63 81 3.2E-9 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00691 Adhesin B signature 245 262 3.2E-9 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00691 Adhesin B signature 38 59 3.2E-9 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00691 Adhesin B signature 138 157 3.2E-9 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00691 Adhesin B signature 82 101 3.2E-9 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00690 Adhesin family signature 196 217 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00690 Adhesin family signature 82 99 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00690 Adhesin family signature 69 82 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 PRINTS PR00690 Adhesin family signature 249 267 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VS_II0690 fa703500bc896d617a2773283e93c00b 319 SUPERFAMILY SSF53807 37 307 4.41E-62 T 14-10-2018 VS_II0690 fa703500bc896d617a2773283e93c00b 319 Gene3D G3DSA:3.40.50.1980 201 307 1.9E-20 T 14-10-2018 VS_II0690 fa703500bc896d617a2773283e93c00b 319 Pfam PF01297 Zinc-uptake complex component A periplasmic 44 304 2.8E-44 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VS_II0690 fa703500bc896d617a2773283e93c00b 319 Gene3D G3DSA:3.40.50.1980 41 190 1.1E-31 T 14-10-2018 VS_0696 050656c8205506b81157c1f876932574 210 PIRSF PIRSF006102 3 210 1.2E-72 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_0696 050656c8205506b81157c1f876932574 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.793 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VS_0696 050656c8205506b81157c1f876932574 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 4.6E-109 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VS_0696 050656c8205506b81157c1f876932574 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 9.1E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VS_II0785 72dad400e44e5a764d3bee5203158c4a 164 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 1.7E-35 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 VS_3116 c0b9f6d76212ccbd25392c7a61e8c5f7 89 Gene3D G3DSA:3.30.160.140 1 89 1.1E-32 T 14-10-2018 IPR036692 Shew3726-like superfamily VS_3116 c0b9f6d76212ccbd25392c7a61e8c5f7 89 SUPERFAMILY SSF160272 1 86 8.11E-30 T 14-10-2018 IPR036692 Shew3726-like superfamily VS_3116 c0b9f6d76212ccbd25392c7a61e8c5f7 89 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 2.8E-24 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 VS_II1252 be9b04a99904d4295d35dfcc41361138 383 Pfam PF03773 Predicted permease 26 379 1.1E-59 T 14-10-2018 IPR005524 Predicted permease DUF318 VS_II0319 b5b984a286fef1403dfe289b688cc09e 402 Pfam PF12060 Domain of unknown function (DUF3541) 66 289 9.5E-115 T 14-10-2018 IPR021928 Protein of unknown function DUF3541 VS_0893 19457eed3948282427c84d171181220e 257 Pfam PF03458 UPF0126 domain 142 213 3.8E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VS_0893 19457eed3948282427c84d171181220e 257 Pfam PF03458 UPF0126 domain 55 128 2.3E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VS_II0551 283e45a3489c751b5c9d3f76de721baa 97 Pfam PF03692 Putative zinc- or iron-chelating domain 15 84 1.4E-9 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VS_0326 7698da092e9339d1f2fbdd329a0a46ed 215 Pfam PF04350 Pilus assembly protein, PilO 70 179 5.9E-7 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VS_1930 bcf206ce1b0e523b82ec13be541a9f91 326 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 9 326 6.0E-142 T 14-10-2018 IPR017566 NrfD VS_1930 bcf206ce1b0e523b82ec13be541a9f91 326 Pfam PF03916 Polysulphide reductase, NrfD 9 326 1.2E-78 T 14-10-2018 IPR005614 NrfD family VS_0942 ddc2de806ba9fe12c753735767bac16d 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0942 ddc2de806ba9fe12c753735767bac16d 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0942 ddc2de806ba9fe12c753735767bac16d 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0942 ddc2de806ba9fe12c753735767bac16d 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0942 ddc2de806ba9fe12c753735767bac16d 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0942 ddc2de806ba9fe12c753735767bac16d 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_0942 ddc2de806ba9fe12c753735767bac16d 228 Gene3D G3DSA:3.40.50.720 1 228 5.5E-63 T 14-10-2018 VS_0942 ddc2de806ba9fe12c753735767bac16d 228 SUPERFAMILY SSF51735 1 228 2.41E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_0942 ddc2de806ba9fe12c753735767bac16d 228 Pfam PF00106 short chain dehydrogenase 3 189 2.3E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_II0016 1cea49edd1056fcbc3fcadbdd16f04d2 373 Pfam PF08308 PEGA domain 302 365 2.9E-22 T 14-10-2018 IPR013229 PEGA VS_II1526 8c7e28197b3723c280ed5888655ec866 186 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 36 176 2.6E-35 T 14-10-2018 IPR012816 NADAR VS_II1526 8c7e28197b3723c280ed5888655ec866 186 Gene3D G3DSA:1.10.357.40 21 185 6.2E-57 T 14-10-2018 IPR037238 YbiA-like superfamily VS_II1526 8c7e28197b3723c280ed5888655ec866 186 Pfam PF08719 Domain of unknown function (DUF1768) 38 176 2.3E-34 T 14-10-2018 IPR012816 NADAR VS_II1526 8c7e28197b3723c280ed5888655ec866 186 SUPERFAMILY SSF143990 28 177 2.22E-51 T 14-10-2018 IPR037238 YbiA-like superfamily VS_II0544 a278b6609fb26e4d50d2f384f1838e7e 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 8.3E-18 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VS_II0544 a278b6609fb26e4d50d2f384f1838e7e 120 Gene3D G3DSA:3.30.1330.40 1 118 6.4E-28 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0544 a278b6609fb26e4d50d2f384f1838e7e 120 SUPERFAMILY SSF55298 3 115 5.18E-24 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VS_II0151 5589e0da8d45e010cfdaa29e0e9130c1 110 SUPERFAMILY SSF51197 4 102 7.0E-33 T 14-10-2018 VS_II0151 5589e0da8d45e010cfdaa29e0e9130c1 110 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 6.8E-27 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 VS_II0151 5589e0da8d45e010cfdaa29e0e9130c1 110 PIRSF PIRSF020632 3 110 1.5E-57 T 14-10-2018 IPR014510 Tellurite resistance predicted, YeaR VS_II0151 5589e0da8d45e010cfdaa29e0e9130c1 110 Gene3D G3DSA:2.60.120.10 1 110 4.0E-47 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VS_2350 e021226f1106ab4ab6e82d3bf97c06ce 195 Pfam PF01765 Ribosome recycling factor 30 193 7.2E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VS_2350 e021226f1106ab4ab6e82d3bf97c06ce 195 TIGRFAM TIGR00496 frr: ribosome recycling factor 20 195 2.1E-74 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VS_2350 e021226f1106ab4ab6e82d3bf97c06ce 195 Gene3D G3DSA:1.10.132.20 111 195 3.8E-28 T 14-10-2018 VS_2350 e021226f1106ab4ab6e82d3bf97c06ce 195 Gene3D G3DSA:3.30.1360.40 45 110 6.0E-29 T 14-10-2018 VS_2350 e021226f1106ab4ab6e82d3bf97c06ce 195 Hamap MF_00040 Ribosome-recycling factor [frr]. 13 195 27.282 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VS_2350 e021226f1106ab4ab6e82d3bf97c06ce 195 SUPERFAMILY SSF55194 12 195 1.7E-70 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VS_2350 e021226f1106ab4ab6e82d3bf97c06ce 195 Gene3D G3DSA:1.10.132.20 10 44 4.3E-8 T 14-10-2018 VS_1733 dcb6fb1b93f863dbcc44ffd3c2718e8c 245 Pfam PF08856 Protein of unknown function (DUF1826) 45 243 8.2E-68 T 14-10-2018 IPR014955 Protein of unknown function DUF1826 VS_0963 654041eb065347326afa06f462ff62d9 209 Pfam PF13743 Thioredoxin 10 175 6.2E-20 T 14-10-2018 VS_0963 654041eb065347326afa06f462ff62d9 209 SUPERFAMILY SSF52833 1 193 2.39E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_0963 654041eb065347326afa06f462ff62d9 209 Gene3D G3DSA:3.40.30.10 1 208 1.9E-54 T 14-10-2018 VS_II0517 8b868307146b68313739646c9b2f0abb 189 SUPERFAMILY SSF49503 80 189 1.95E-23 T 14-10-2018 IPR008972 Cupredoxin VS_II0517 8b868307146b68313739646c9b2f0abb 189 Gene3D G3DSA:2.60.40.420 72 189 4.3E-18 T 14-10-2018 IPR008972 Cupredoxin VS_1286 b3c77e113ae8e17d11ad093dc42b639c 334 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 165 2.6E-26 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase VS_2385 fec3d4cd4fd732dd1158ff30476281a1 116 SUPERFAMILY SSF46689 2 92 4.3E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0509 fec3d4cd4fd732dd1158ff30476281a1 116 SUPERFAMILY SSF46689 2 92 4.3E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_0457 fec3d4cd4fd732dd1158ff30476281a1 116 SUPERFAMILY SSF46689 2 92 4.3E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_2064 42b98bffb50e058e74d1bd5ac8e7b1a6 170 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 1.2E-45 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 VS_II0430 548bc2eaecb805afb4b6adb90238a00d 131 Pfam PF07361 Cytochrome b562 26 121 1.2E-24 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VS_II0430 548bc2eaecb805afb4b6adb90238a00d 131 Gene3D G3DSA:1.20.120.10 20 128 1.8E-7 T 14-10-2018 VS_II0430 548bc2eaecb805afb4b6adb90238a00d 131 SUPERFAMILY SSF47175 26 121 3.3E-22 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VS_2731 63fac506ffeb8dff38168aaf61cbd3fa 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 4.1E-32 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VS_2731 63fac506ffeb8dff38168aaf61cbd3fa 149 Gene3D G3DSA:3.40.50.10110 1 146 7.4E-43 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VS_2731 63fac506ffeb8dff38168aaf61cbd3fa 149 SUPERFAMILY SSF102400 1 145 1.96E-41 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VS_2459 14363699ab37cbf5413d0e6086ae4845 203 Pfam PF10144 Bacterial virulence factor haemolysin 10 153 6.2E-37 T 14-10-2018 IPR019305 Uncharacterised protein family Smp VS_2905 c18d66fc0719e775760cd2e5645ead32 80 Gene3D G3DSA:1.20.5.340 1 79 5.0E-28 T 14-10-2018 VS_2905 c18d66fc0719e775760cd2e5645ead32 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.976 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VS_2905 c18d66fc0719e775760cd2e5645ead32 80 Pfam PF06005 Cell division protein ZapB 1 77 1.1E-26 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VS_1751 dc0b27caa4db386b9e13a863e308fb7a 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VS_1751 dc0b27caa4db386b9e13a863e308fb7a 238 SUPERFAMILY SSF51735 4 237 6.3E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_1751 dc0b27caa4db386b9e13a863e308fb7a 238 Gene3D G3DSA:3.40.50.720 3 238 1.0E-41 T 14-10-2018 VS_1751 dc0b27caa4db386b9e13a863e308fb7a 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1751 dc0b27caa4db386b9e13a863e308fb7a 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1751 dc0b27caa4db386b9e13a863e308fb7a 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VS_1751 dc0b27caa4db386b9e13a863e308fb7a 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 236 2.4E-25 T 14-10-2018 VS_1676 e63a4a913f55033b9843b34207efcbae 122 Pfam PF13671 AAA domain 3 97 1.6E-11 T 14-10-2018 VS_1676 e63a4a913f55033b9843b34207efcbae 122 SUPERFAMILY SSF52540 3 95 4.72E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1676 e63a4a913f55033b9843b34207efcbae 122 Gene3D G3DSA:3.40.50.300 1 122 3.8E-24 T 14-10-2018 VS_1413 4c84ababbc2344d190222744562625e1 433 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 27 420 1.2E-104 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VS_1413 4c84ababbc2344d190222744562625e1 433 Pfam PF04403 Paraquat-inducible protein A 71 222 4.5E-36 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VS_1413 4c84ababbc2344d190222744562625e1 433 Pfam PF04403 Paraquat-inducible protein A 266 422 2.8E-46 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VS_II0245 d5f0dbbf21e5475afe187c335cda1246 862 Pfam PF02687 FtsX-like permease family 761 851 9.1E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_II0245 d5f0dbbf21e5475afe187c335cda1246 862 Pfam PF12704 MacB-like periplasmic core domain 510 703 5.4E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VS_II0286 23edea8ecee03c9abe80b275e8f76529 296 Pfam PF01497 Periplasmic binding protein 41 271 8.3E-38 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VS_II0286 23edea8ecee03c9abe80b275e8f76529 296 Gene3D G3DSA:3.40.50.1980 35 153 6.8E-34 T 14-10-2018 VS_II0286 23edea8ecee03c9abe80b275e8f76529 296 SUPERFAMILY SSF53807 40 295 2.28E-45 T 14-10-2018 VS_II0286 23edea8ecee03c9abe80b275e8f76529 296 Gene3D G3DSA:3.40.50.1980 154 296 3.8E-40 T 14-10-2018 VS_II0692 45b53d15ff63754a194864503884736b 291 SUPERFAMILY SSF81345 15 281 1.57E-34 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0692 45b53d15ff63754a194864503884736b 291 Gene3D G3DSA:1.10.3470.10 77 288 2.2E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0692 45b53d15ff63754a194864503884736b 291 Pfam PF00950 ABC 3 transport family 22 285 5.8E-55 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VS_2958 d9a19fa380f48b9e7f18c64260cf9253 197 Gene3D G3DSA:3.40.470.10 2 192 1.4E-75 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_2958 d9a19fa380f48b9e7f18c64260cf9253 197 SMART SM00986 26 183 3.3E-29 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_2958 d9a19fa380f48b9e7f18c64260cf9253 197 Pfam PF03167 Uracil DNA glycosylase superfamily 30 179 4.6E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_2958 d9a19fa380f48b9e7f18c64260cf9253 197 SMART SM00987 26 183 3.3E-29 T 14-10-2018 VS_2958 d9a19fa380f48b9e7f18c64260cf9253 197 SUPERFAMILY SSF52141 4 190 5.56E-60 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VS_II0031 67bec86fdff60b94192d9dd00688f9a6 540 Pfam PF00884 Sulfatase 235 524 5.0E-44 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VS_II0031 67bec86fdff60b94192d9dd00688f9a6 540 Pfam PF08019 Domain of unknown function (DUF1705) 56 206 2.3E-48 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VS_II0031 67bec86fdff60b94192d9dd00688f9a6 540 Gene3D G3DSA:3.40.720.10 210 540 2.3E-78 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_II0031 67bec86fdff60b94192d9dd00688f9a6 540 SUPERFAMILY SSF53649 294 529 9.35E-17 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_1629 59ceee4c55b79bb6fe196f6b2e97235f 199 Pfam PF01810 LysE type translocator 13 198 4.0E-40 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_2418 5ee3b1baec8cb5e7bf85a5cfafe87f06 78 Gene3D G3DSA:3.40.50.1820 1 78 5.8E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2418 5ee3b1baec8cb5e7bf85a5cfafe87f06 78 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 76 2.8E-31 T 14-10-2018 IPR010520 UPF0255 family VS_II0847 38a1b19ee6c8e4c000dcbafd5b60a578 777 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 407 731 1.9E-155 T 14-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 VS_II0753 b623ae049aa45edc1a5b82424d473392 237 Pfam PF03746 LamB/YcsF family 1 233 4.7E-90 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VS_II0753 b623ae049aa45edc1a5b82424d473392 237 Gene3D G3DSA:3.20.20.370 1 237 1.7E-91 T 14-10-2018 VS_II0753 b623ae049aa45edc1a5b82424d473392 237 SUPERFAMILY SSF88713 1 235 2.96E-87 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VS_1583 e92c39bafc67a7caa1bdf679230fa1ea 193 Pfam PF13023 HD domain 14 176 3.6E-47 T 14-10-2018 IPR006674 HD domain VS_1583 e92c39bafc67a7caa1bdf679230fa1ea 193 SUPERFAMILY SSF109604 5 184 2.32E-42 T 14-10-2018 VS_1583 e92c39bafc67a7caa1bdf679230fa1ea 193 Gene3D G3DSA:1.10.3210.10 1 193 3.5E-50 T 14-10-2018 VS_2386 004387b94b2a0fcb34b4e3aef87ddc70 235 Pfam PF00665 Integrase core domain 78 190 3.9E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_2386 004387b94b2a0fcb34b4e3aef87ddc70 235 SUPERFAMILY SSF53098 75 230 3.19E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_2386 004387b94b2a0fcb34b4e3aef87ddc70 235 Gene3D G3DSA:3.30.420.10 76 234 6.0E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VS_II1140 1f1ca130934a24e7546547dd4c37a56e 120 Pfam PF11225 Protein of unknown function (DUF3024) 58 119 4.1E-20 T 14-10-2018 IPR021388 Bacteriophage 933W, L0084 VS_II1272 df4ff2cb5834872f306366132c609591 212 Gene3D G3DSA:3.40.50.720 1 211 3.0E-46 T 14-10-2018 VS_II1272 df4ff2cb5834872f306366132c609591 212 Pfam PF13460 NAD(P)H-binding 7 197 3.8E-29 T 14-10-2018 IPR016040 NAD(P)-binding domain VS_II1272 df4ff2cb5834872f306366132c609591 212 SUPERFAMILY SSF51735 1 210 3.55E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VS_II0875 bb47359daca75a451744e17048e2fda8 180 Pfam PF14316 Domain of unknown function (DUF4381) 15 164 1.6E-25 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 VS_II0301 6eef58088d88ad8288cf065846b5e406 99 SUPERFAMILY SSF81296 15 94 4.67E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set VS_II0301 6eef58088d88ad8288cf065846b5e406 99 Gene3D G3DSA:2.60.40.10 5 98 3.9E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold VS_2760 298f258878385d9070acc16e68fcca12 289 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 285 40.099 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VS_2760 298f258878385d9070acc16e68fcca12 289 PIRSF PIRSF005052 1 288 1.1E-104 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VS_2760 298f258878385d9070acc16e68fcca12 289 SUPERFAMILY SSF52540 2 159 4.03E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_2760 298f258878385d9070acc16e68fcca12 289 Pfam PF03668 P-loop ATPase protein family 1 285 2.4E-109 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VS_2760 298f258878385d9070acc16e68fcca12 289 Gene3D G3DSA:3.40.50.300 1 170 3.1E-5 T 14-10-2018 VS_II0060 bb066b990087c72646aebaaeb2fdeeb0 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 7.1E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0060 bb066b990087c72646aebaaeb2fdeeb0 280 Gene3D G3DSA:1.10.3720.10 86 274 3.1E-34 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0060 bb066b990087c72646aebaaeb2fdeeb0 280 SUPERFAMILY SSF161098 88 272 3.92E-39 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0060 bb066b990087c72646aebaaeb2fdeeb0 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 9.6E-128 T 14-10-2018 IPR017784 ABC transporter, choline, permease protein VS_II0800 db572fcfdfc8c550ad1cbe6910f49318 203 PIRSF PIRSF011489 1 196 3.3E-74 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VS_II0800 db572fcfdfc8c550ad1cbe6910f49318 203 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.6E-28 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VS_0657 d411390e7f7fd92938563c63813964a8 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 8.1E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0657 d411390e7f7fd92938563c63813964a8 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0657 d411390e7f7fd92938563c63813964a8 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 1.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VS_0670 7e7fa1efa6477fd58cf4ce35d74dc894 97 Pfam PF07130 YebG protein 1 72 4.4E-32 T 14-10-2018 IPR009813 Uncharacterised protein family YebG VS_0670 7e7fa1efa6477fd58cf4ce35d74dc894 97 Gene3D G3DSA:1.10.10.710 21 96 1.5E-8 T 14-10-2018 IPR038627 YebG-like superfamily VS_2875 4e68b5b8337eb5f6f56b1940d0b59a84 209 PIRSF PIRSF016482 6 209 2.1E-71 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VS_2875 4e68b5b8337eb5f6f56b1940d0b59a84 209 Pfam PF04350 Pilus assembly protein, PilO 59 201 2.3E-47 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VS_2875 4e68b5b8337eb5f6f56b1940d0b59a84 209 Gene3D G3DSA:3.30.70.60 104 208 2.7E-26 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VS_0767 04cf79f58354a3438bfeffd960856f76 150 Pfam PF04214 Protein of unknown function, DUF 52 121 2.3E-32 T 14-10-2018 IPR007332 Protein of unknown function DUF411 VS_2729 13b7180008cfd3700458d95fed131e77 219 SUPERFAMILY SSF52949 1 184 2.71E-53 T 14-10-2018 VS_2729 13b7180008cfd3700458d95fed131e77 219 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.2E-35 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VS_2729 13b7180008cfd3700458d95fed131e77 219 Gene3D G3DSA:3.40.220.10 1 159 5.0E-61 T 14-10-2018 VS_2436 0b7836a4fb98aa85da4b82b1360f60a2 321 Gene3D G3DSA:1.20.81.30 145 257 1.2E-7 T 14-10-2018 VS_2436 0b7836a4fb98aa85da4b82b1360f60a2 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 276 9.5E-17 T 14-10-2018 IPR018076 Type II secretion system F domain VS_1738 4691dd26c3bbbd34a3d4619009fad0c9 163 Gene3D G3DSA:3.10.129.10 2 159 8.3E-20 T 14-10-2018 VS_1738 4691dd26c3bbbd34a3d4619009fad0c9 163 Pfam PF03061 Thioesterase superfamily 74 140 5.3E-6 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VS_1738 4691dd26c3bbbd34a3d4619009fad0c9 163 SUPERFAMILY SSF54637 5 154 2.35E-23 T 14-10-2018 IPR029069 HotDog domain superfamily VS_II0726 cb28bba26987f07d4c807e779670eb19 145 SUPERFAMILY SSF158675 1 143 1.83E-50 T 14-10-2018 IPR023132 Sama2622-like superfamily VS_II0726 cb28bba26987f07d4c807e779670eb19 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 7.1E-52 T 14-10-2018 IPR021422 Protein of unknown function DUF3069 VS_1801 c9d10be07b048db7a5ab538b2fca46a6 180 SUPERFAMILY SSF111126 1 178 2.51E-46 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VS_1801 c9d10be07b048db7a5ab538b2fca46a6 180 Gene3D G3DSA:3.90.1520.10 1 180 4.1E-54 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VS_1801 c9d10be07b048db7a5ab538b2fca46a6 180 Pfam PF07700 Haem-NO-binding 2 162 7.7E-37 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VS_2675 a0dc655f50f8d39642a880ba3478062f 1128 SUPERFAMILY SSF49899 629 860 6.14E-7 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VS_0016 04fa14ee5e3417da5bb0169ac13893d1 72 Pfam PF04964 Flp/Fap pilin component 16 61 2.7E-9 T 14-10-2018 IPR007047 Flp/Fap pilin component VS_0682 bbf23b2265631853e3534251ee8efe3a 142 SUPERFAMILY SSF82649 3 140 4.55E-48 T 14-10-2018 VS_0682 bbf23b2265631853e3534251ee8efe3a 142 Gene3D G3DSA:3.90.1010.10 1 142 3.1E-49 T 14-10-2018 VS_0682 bbf23b2265631853e3534251ee8efe3a 142 Pfam PF02657 Fe-S metabolism associated domain 20 139 1.1E-44 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VS_0682 bbf23b2265631853e3534251ee8efe3a 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 6 139 6.3E-45 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VS_II0375 0f7de1a5f841c41e6c7c4511c547ae21 216 Pfam PF11769 Protein of unknown function (DUF3313) 8 206 3.9E-46 T 14-10-2018 IPR021747 Protein of unknown function DUF3313 VS_0895 8e9f7c493416304ef95ae97903827dad 87 Pfam PF08891 YfcL protein 4 84 3.3E-31 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL VS_1125 ba0d2ae341dc0654c36f81cba47c11ff 353 Gene3D G3DSA:1.10.3470.10 27 353 6.9E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_1125 ba0d2ae341dc0654c36f81cba47c11ff 353 SUPERFAMILY SSF81345 23 349 1.57E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_1125 ba0d2ae341dc0654c36f81cba47c11ff 353 Pfam PF01032 FecCD transport family 44 349 5.7E-72 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_1559 c8a967642bbda4fbd10c82f4da462dde 243 Pfam PF04986 Putative transposase 20 186 6.7E-43 T 14-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 VS_II1200 e4bc92e48dcf5a3e20671a71336fb4ae 338 Pfam PF12146 Serine aminopeptidase, S33 79 184 4.3E-8 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VS_II1200 e4bc92e48dcf5a3e20671a71336fb4ae 338 PIRSF PIRSF031982 1 338 3.5E-77 T 14-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL VS_II1200 e4bc92e48dcf5a3e20671a71336fb4ae 338 SUPERFAMILY SSF53474 1 293 1.65E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2666 35a8a9e68c5bba36a8c54affe15e100e 280 SUPERFAMILY SSF53800 11 268 2.94E-40 T 14-10-2018 VS_2666 35a8a9e68c5bba36a8c54affe15e100e 280 Gene3D G3DSA:3.40.50.1400 12 118 8.8E-27 T 14-10-2018 VS_2666 35a8a9e68c5bba36a8c54affe15e100e 280 Gene3D G3DSA:3.40.50.1400 119 228 8.8E-27 T 14-10-2018 VS_2666 35a8a9e68c5bba36a8c54affe15e100e 280 Pfam PF06180 Cobalt chelatase (CbiK) 12 227 7.0E-19 T 14-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 VS_II0769 6c6b3a5904ba1defd0eba3bb4a7e7800 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 75 2.0E-36 T 14-10-2018 IPR021811 Protein of unknown function DUF3389 VS_II1456 26087bf7e8f0ee698afade5494909c2d 426 Pfam PF02353 Mycolic acid cyclopropane synthetase 140 407 4.4E-81 T 14-10-2018 VS_II1456 26087bf7e8f0ee698afade5494909c2d 426 SUPERFAMILY SSF53335 26 363 2.01E-89 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_II1456 26087bf7e8f0ee698afade5494909c2d 426 Gene3D G3DSA:3.40.50.150 144 416 1.2E-99 T 14-10-2018 VS_II1456 26087bf7e8f0ee698afade5494909c2d 426 PIRSF PIRSF003085 6 424 7.5E-121 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VS_0755 56cf30caa0ccf0e7a0e58e6c0feda88b 269 SUPERFAMILY SSF48452 190 253 1.82E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0755 56cf30caa0ccf0e7a0e58e6c0feda88b 269 Pfam PF13371 Tetratricopeptide repeat 187 259 6.3E-24 T 14-10-2018 VS_0755 56cf30caa0ccf0e7a0e58e6c0feda88b 269 Gene3D G3DSA:1.25.40.10 180 266 1.1E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0755 56cf30caa0ccf0e7a0e58e6c0feda88b 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.6E-41 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VS_2801 221370ffbbe00ac266224e474b1478b5 226 Pfam PF08525 Opacity-associated protein A N-terminal motif 78 103 2.9E-7 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VS_2801 221370ffbbe00ac266224e474b1478b5 226 Gene3D G3DSA:3.10.450.350 131 225 1.9E-12 T 14-10-2018 VS_2801 221370ffbbe00ac266224e474b1478b5 226 Pfam PF04225 Opacity-associated protein A LysM-like domain 142 226 3.6E-38 T 14-10-2018 IPR007340 Opacity-associated protein A VS_1069 c5deca7d75f6eea2780a2084d6e3a154 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 241 2.5E-56 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_1069 c5deca7d75f6eea2780a2084d6e3a154 242 Gene3D G3DSA:3.30.70.580 57 132 4.7E-27 T 14-10-2018 VS_1069 c5deca7d75f6eea2780a2084d6e3a154 242 Gene3D G3DSA:3.30.70.1560 133 231 6.5E-40 T 14-10-2018 VS_1069 c5deca7d75f6eea2780a2084d6e3a154 242 SUPERFAMILY SSF55120 58 241 3.2E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1069 c5deca7d75f6eea2780a2084d6e3a154 242 Pfam PF00849 RNA pseudouridylate synthase 69 212 3.5E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_1069 c5deca7d75f6eea2780a2084d6e3a154 242 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_0669 4923d216a13b541c50c1d7aee5a4f001 230 Pfam PF01592 NifU-like N terminal domain 56 102 2.0E-4 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VS_0669 4923d216a13b541c50c1d7aee5a4f001 230 SUPERFAMILY SSF82649 56 101 1.7E-7 T 14-10-2018 VS_0669 4923d216a13b541c50c1d7aee5a4f001 230 Gene3D G3DSA:3.90.1010.10 43 116 3.4E-6 T 14-10-2018 VS_1012 31af370257ffcd818da3feca15bc0a99 727 Pfam PF05170 AsmA family 2 614 3.6E-115 T 14-10-2018 IPR007844 AsmA VS_1688 6e3e4066b540b4983dc86c3315d81b00 54 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 22 50 1.5E-13 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 VS_1688 6e3e4066b540b4983dc86c3315d81b00 54 Pfam PF08173 Membrane bound YbgT-like protein 22 48 5.2E-13 T 14-10-2018 IPR012994 Membrane bound YbgT-like VS_II0700 950a8c43e726c5e53f3ddb01bab2b24a 111 Gene3D G3DSA:1.10.10.10 25 111 7.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VS_II0700 950a8c43e726c5e53f3ddb01bab2b24a 111 Pfam PF00486 Transcriptional regulatory protein, C terminal 50 109 5.8E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_II0700 950a8c43e726c5e53f3ddb01bab2b24a 111 SUPERFAMILY SSF46894 42 109 3.12E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VS_II0700 950a8c43e726c5e53f3ddb01bab2b24a 111 SMART SM00862 38 109 1.1E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VS_0184 78b786c9b1478db87e89881998520eee 55 Gene3D G3DSA:2.20.28.120 1 55 1.0E-29 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0184 78b786c9b1478db87e89881998520eee 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VS_0184 78b786c9b1478db87e89881998520eee 55 Pfam PF00471 Ribosomal protein L33 7 53 1.1E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0184 78b786c9b1478db87e89881998520eee 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.62 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0184 78b786c9b1478db87e89881998520eee 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.6E-25 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VS_0184 78b786c9b1478db87e89881998520eee 55 SUPERFAMILY SSF57829 1 53 4.7E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VS_2610 96ac5ba164ab5c5325b06d85c7d4e9f4 277 Gene3D G3DSA:1.10.287.1080 7 132 2.2E-45 T 14-10-2018 VS_2610 96ac5ba164ab5c5325b06d85c7d4e9f4 277 Gene3D G3DSA:1.10.287.1080 138 271 8.5E-44 T 14-10-2018 VS_2610 96ac5ba164ab5c5325b06d85c7d4e9f4 277 SUPERFAMILY SSF101386 9 110 3.27E-24 T 14-10-2018 VS_2610 96ac5ba164ab5c5325b06d85c7d4e9f4 277 SUPERFAMILY SSF101386 144 245 3.74E-23 T 14-10-2018 VS_2610 96ac5ba164ab5c5325b06d85c7d4e9f4 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 177 237 3.1E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VS_2610 96ac5ba164ab5c5325b06d85c7d4e9f4 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 34 107 3.7E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VS_2610 96ac5ba164ab5c5325b06d85c7d4e9f4 277 TIGRFAM TIGR00444 mazG: MazG family protein 17 266 3.0E-101 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG VS_0668 f033faa5087619ce0af742a72cfa0ff2 329 Pfam PF14057 GGGtGRT protein 8 325 1.7E-176 T 14-10-2018 IPR025964 GGGtGRT protein VS_2669 69d88d119b1144bed8a298e565ef035b 321 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 19 315 2.0E-60 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VS_2669 69d88d119b1144bed8a298e565ef035b 321 Pfam PF03186 CobD/Cbib protein 20 299 2.3E-87 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VS_2669 69d88d119b1144bed8a298e565ef035b 321 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 321 87.672 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VS_II0499 1bf140d802dc0dc094e14024e3fb5ebf 252 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 21 244 1.1E-88 T 14-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family VS_II0783 75a121663640003bad4e12fceb1b5d50 100 SUPERFAMILY SSF56300 5 93 4.83E-19 T 14-10-2018 VS_II0783 75a121663640003bad4e12fceb1b5d50 100 Gene3D G3DSA:3.60.21.10 1 94 2.5E-22 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VS_II0361 eb705dbfa6c1dc4808ab31cc1bc06608 352 SUPERFAMILY SSF56935 22 350 3.43E-51 T 14-10-2018 VS_II0361 eb705dbfa6c1dc4808ab31cc1bc06608 352 Pfam PF00267 Gram-negative porin 42 347 5.3E-16 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VS_II0361 eb705dbfa6c1dc4808ab31cc1bc06608 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 5.7E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VS_II0361 eb705dbfa6c1dc4808ab31cc1bc06608 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 5.7E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VS_II0361 eb705dbfa6c1dc4808ab31cc1bc06608 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 302 321 5.7E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VS_II0361 eb705dbfa6c1dc4808ab31cc1bc06608 352 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 5.7E-7 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VS_II0361 eb705dbfa6c1dc4808ab31cc1bc06608 352 Gene3D G3DSA:2.40.160.10 22 351 4.1E-52 T 14-10-2018 IPR023614 Porin domain superfamily VS_2423 16e313ec3367f33b51131634445dd7eb 202 Pfam PF11810 Domain of unknown function (DUF3332) 28 198 8.0E-41 T 14-10-2018 IPR021768 Protein of unknown function DUF3332 VS_0163 7eeaf82e72029cc20c4b636fde9a8476 141 PIRSF PIRSF029598 3 135 5.1E-38 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VS_0163 7eeaf82e72029cc20c4b636fde9a8476 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 3.8E-14 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VS_II0263 a22c5ca7aa517ad4e9679c527571c428 196 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 30 38 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VS_2272 460831bfeeb60c3ae5bb2ebf8d7dc9cd 103 Pfam PF10262 Rdx family 16 89 3.0E-30 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type VS_2272 460831bfeeb60c3ae5bb2ebf8d7dc9cd 103 SUPERFAMILY SSF52833 15 98 4.7E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_2272 460831bfeeb60c3ae5bb2ebf8d7dc9cd 103 Gene3D G3DSA:3.40.30.10 5 103 2.3E-38 T 14-10-2018 VS_2272 460831bfeeb60c3ae5bb2ebf8d7dc9cd 103 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 17 89 6.4E-24 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type VS_1881 7df24bfe1bc7b9e48ebfdddfc2dc39bf 222 Pfam PF10899 Putative abortive phage resistance protein AbiGi, antitoxin 19 196 1.2E-55 T 14-10-2018 IPR021223 Abortive phage resistance protein AbiGi VS_II0857 3c57a3dfa2f5d28b7bb2a7b299ccf1cf 120 SUPERFAMILY SSF47226 2 108 4.88E-5 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II0857 3c57a3dfa2f5d28b7bb2a7b299ccf1cf 120 Gene3D G3DSA:1.20.120.160 1 113 9.6E-6 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VS_II0713 e71710b4d74429a2ed4cafd2bcf03f37 475 PIRSF PIRSF006603 12 473 6.9E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0713 e71710b4d74429a2ed4cafd2bcf03f37 475 Pfam PF01554 MatE 276 425 2.2E-17 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0713 e71710b4d74429a2ed4cafd2bcf03f37 475 Pfam PF01554 MatE 36 195 2.8E-30 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0713 e71710b4d74429a2ed4cafd2bcf03f37 475 TIGRFAM TIGR00797 matE: MATE efflux family protein 36 436 1.3E-53 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0328 7c24fb980985285451982a9fd36d6d7d 111 Gene3D G3DSA:1.10.4160.10 1 110 4.9E-12 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily VS_II0328 7c24fb980985285451982a9fd36d6d7d 111 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 2 96 9.7E-12 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VS_1098 074c09cc642e4e24139e3dcc1ef52252 319 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 295 7.1E-114 T 14-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VS_1098 074c09cc642e4e24139e3dcc1ef52252 319 SUPERFAMILY SSF56059 43 280 2.73E-19 T 14-10-2018 VS_1098 074c09cc642e4e24139e3dcc1ef52252 319 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 319 1.6E-169 T 14-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein VS_2794 176cef4d4e967bf32dde8d9209abca33 249 Pfam PF05742 Transport and Golgi organisation 2 16 124 3.2E-7 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 VS_1177 f22b72e6b522d1c0553fb9542510c09a 70 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 70 9.8E-22 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich VS_1177 f22b72e6b522d1c0553fb9542510c09a 70 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 70 9.1E-23 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich VS_II0230 5316acbd8b2911b4c121836fe653e195 346 SUPERFAMILY SSF53474 76 345 6.12E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II0230 5316acbd8b2911b4c121836fe653e195 346 Pfam PF07859 alpha/beta hydrolase fold 118 317 1.8E-43 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 VS_II0230 5316acbd8b2911b4c121836fe653e195 346 Gene3D G3DSA:3.40.50.1820 24 346 6.9E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1148 5120fc3c942228de0e8e1fc373c72dad 169 Gene3D G3DSA:3.10.129.10 36 169 2.1E-39 T 14-10-2018 VS_1148 5120fc3c942228de0e8e1fc373c72dad 169 Pfam PF03061 Thioesterase superfamily 65 135 3.0E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VS_1148 5120fc3c942228de0e8e1fc373c72dad 169 SUPERFAMILY SSF54637 49 168 1.79E-35 T 14-10-2018 IPR029069 HotDog domain superfamily VS_II0730 106d226f9e88016df192584bb2ec0195 122 Pfam PF10719 Late competence development protein ComFB 8 82 1.6E-11 T 14-10-2018 IPR019657 Late competence development protein ComFB VS_1531 7248d05f05b4022617dfddfd46293fa2 372 SUPERFAMILY SSF53756 11 342 7.85E-20 T 14-10-2018 VS_1531 7248d05f05b4022617dfddfd46293fa2 372 Gene3D G3DSA:3.40.50.2000 202 349 6.6E-36 T 14-10-2018 VS_1531 7248d05f05b4022617dfddfd46293fa2 372 Pfam PF13692 Glycosyl transferases group 1 216 319 3.7E-8 T 14-10-2018 VS_II0436 91faaa4f5a96610a91feba90288e224b 397 SUPERFAMILY SSF53383 4 394 2.02E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VS_II0436 91faaa4f5a96610a91feba90288e224b 397 Pfam PF00155 Aminotransferase class I and II 43 387 4.6E-73 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VS_II0436 91faaa4f5a96610a91feba90288e224b 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.372 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VS_II0436 91faaa4f5a96610a91feba90288e224b 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 7.9E-208 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VS_II0436 91faaa4f5a96610a91feba90288e224b 397 Gene3D G3DSA:3.40.640.10 58 296 5.6E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VS_II0436 91faaa4f5a96610a91feba90288e224b 397 Gene3D G3DSA:3.90.1150.10 40 387 5.6E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VS_II0436 91faaa4f5a96610a91feba90288e224b 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VS_II0596 83dcd89fc1bb58e97f18c5f86dba88ff 193 PIRSF PIRSF000013 1 193 1.7E-91 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VS_II0596 83dcd89fc1bb58e97f18c5f86dba88ff 193 Gene3D G3DSA:1.10.3820.10 12 189 1.0E-32 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VS_II0596 83dcd89fc1bb58e97f18c5f86dba88ff 193 SUPERFAMILY SSF48695 19 192 3.01E-54 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VS_II0596 83dcd89fc1bb58e97f18c5f86dba88ff 193 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 2.3E-69 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VS_1206 9b321a3795d172bd86f929734cc1234f 174 Gene3D G3DSA:3.40.50.300 60 166 3.6E-12 T 14-10-2018 VS_1206 9b321a3795d172bd86f929734cc1234f 174 SUPERFAMILY SSF52540 67 154 5.84E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_1206 9b321a3795d172bd86f929734cc1234f 174 Pfam PF03846 Cell division inhibitor SulA 73 140 9.0E-7 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 VS_1607 60e2b8507eabab78462d0aed1d173389 168 SUPERFAMILY SSF56784 9 164 8.93E-22 T 14-10-2018 IPR036412 HAD-like superfamily VS_1607 60e2b8507eabab78462d0aed1d173389 168 Gene3D G3DSA:3.40.50.1000 7 167 1.9E-27 T 14-10-2018 IPR023214 HAD superfamily VS_1607 60e2b8507eabab78462d0aed1d173389 168 Pfam PF13419 Haloacid dehalogenase-like hydrolase 34 138 1.4E-8 T 14-10-2018 VS_3030 b9136d3449fdce48f954dc3efb103eaa 337 Pfam PF01757 Acyltransferase family 7 326 1.3E-28 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VS_1849 b52fac619fd7ac7ac20e1adc57622b3e 457 PIRSF PIRSF006603 5 457 6.8E-63 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1849 b52fac619fd7ac7ac20e1adc57622b3e 457 Pfam PF01554 MatE 251 414 2.1E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1849 b52fac619fd7ac7ac20e1adc57622b3e 457 Pfam PF01554 MatE 24 184 1.8E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1849 b52fac619fd7ac7ac20e1adc57622b3e 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 420 1.0E-60 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1489 df78daa9565d57b40e25d7fc77770144 228 Pfam PF11748 Protein of unknown function (DUF3306) 4 134 1.2E-27 T 14-10-2018 IPR021735 Protein of unknown function DUF3306 VS_0672 463e970912ccb7308e74cc9f95317719 331 Pfam PF03595 Voltage-dependent anion channel 19 312 1.0E-29 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VS_0672 463e970912ccb7308e74cc9f95317719 331 Gene3D G3DSA:1.50.10.150 7 322 1.1E-41 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VS_II0489 290bd06b26a5b46ca814ce3fc00d2b6e 251 SUPERFAMILY SSF69572 6 251 1.27E-82 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VS_II0489 290bd06b26a5b46ca814ce3fc00d2b6e 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 10 250 1.1E-125 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 VS_II0489 290bd06b26a5b46ca814ce3fc00d2b6e 251 Gene3D G3DSA:3.40.50.720 6 251 4.1E-85 T 14-10-2018 VS_II0489 290bd06b26a5b46ca814ce3fc00d2b6e 251 Pfam PF00899 ThiF family 14 247 3.6E-63 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VS_II1467 106631501ccef725888ef90bbe4c4c86 155 Pfam PF02566 OsmC-like protein 56 153 7.3E-17 T 14-10-2018 IPR003718 OsmC/Ohr family VS_II1467 106631501ccef725888ef90bbe4c4c86 155 Gene3D G3DSA:3.30.300.20 1 153 1.0E-51 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VS_II1467 106631501ccef725888ef90bbe4c4c86 155 SUPERFAMILY SSF82784 1 153 3.01E-49 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VS_II0670 0ec3d18d396fd85471fab9959a221edd 271 Pfam PF01226 Formate/nitrite transporter 9 258 6.8E-58 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VS_II0670 0ec3d18d396fd85471fab9959a221edd 271 Gene3D G3DSA:1.20.1080.10 2 251 3.4E-63 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VS_II1434 f56f84bae1de27faadfa54f63e43ce88 117 Pfam PF04219 Protein of unknown function, DUF 12 100 4.0E-35 T 14-10-2018 IPR007335 Protein of unknown function DUF413 VS_2157 41889fd23d76ccc7f3dd98c08783bd1b 249 Pfam PF03591 AzlC protein 28 166 1.0E-35 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease VS_II1372 aeb411c6cfd311c3e948bca67b61b8a2 391 Gene3D G3DSA:3.90.1200.10 179 358 9.6E-7 T 14-10-2018 VS_II1372 aeb411c6cfd311c3e948bca67b61b8a2 391 Pfam PF02958 Ecdysteroid kinase 229 328 5.5E-9 T 14-10-2018 IPR004119 Protein of unknown function DUF227 VS_II1372 aeb411c6cfd311c3e948bca67b61b8a2 391 SMART SM00587 164 328 0.002 T 14-10-2018 IPR015897 CHK kinase-like VS_II1372 aeb411c6cfd311c3e948bca67b61b8a2 391 SUPERFAMILY SSF56112 46 381 2.62E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_1139 49b82e8ebe7953beae23032c8dcf8495 495 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 25 249 2.6E-18 T 14-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 VS_0635 bcbf807b7211875f122f021d63c157ec 255 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 179 6.9E-38 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VS_0635 bcbf807b7211875f122f021d63c157ec 255 Pfam PF01553 Acyltransferase 56 179 8.6E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_0635 bcbf807b7211875f122f021d63c157ec 255 SUPERFAMILY SSF69593 5 238 1.57E-58 T 14-10-2018 VS_0635 bcbf807b7211875f122f021d63c157ec 255 SMART SM00563 67 182 5.3E-36 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_1701 c334e613659341127d666e1cbe69363c 268 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 268 45.582 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VS_1701 c334e613659341127d666e1cbe69363c 268 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 20 258 2.1E-32 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VS_1701 c334e613659341127d666e1cbe69363c 268 Pfam PF02654 Cobalamin-5-phosphate synthase 23 257 9.1E-50 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VS_1399 5bed7bad7999795790443f48b8fdf019 221 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 14-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 VS_1399 5bed7bad7999795790443f48b8fdf019 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.3E-41 T 14-10-2018 IPR006214 Bax inhibitor 1-related VS_II1203 f32882f2890e24e7cc24f446ec3fdcfe 254 Gene3D G3DSA:3.90.850.10 1 253 1.3E-51 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VS_II1203 f32882f2890e24e7cc24f446ec3fdcfe 254 SUPERFAMILY SSF56529 5 250 8.63E-36 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VS_1975 628d6d0a651bf2428b3487a304393fef 133 SUPERFAMILY SSF48295 5 53 1.1E-11 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VS_1420 d309f24002da3135bceb62c16e52f638 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 2.2E-28 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 VS_II0533 b5002602b549a7765c42d075a4ab9eae 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 259 7.2E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0533 b5002602b549a7765c42d075a4ab9eae 266 Gene3D G3DSA:1.10.3720.10 48 261 1.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0533 b5002602b549a7765c42d075a4ab9eae 266 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 60 154 2.8E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_II0533 b5002602b549a7765c42d075a4ab9eae 266 SUPERFAMILY SSF161098 61 246 2.94E-43 T 14-10-2018 IPR035906 MetI-like superfamily VS_1522 c30e950b957f35af5f4c3e29f40d82bd 229 Gene3D G3DSA:3.40.50.300 2 196 7.8E-25 T 14-10-2018 VS_1522 c30e950b957f35af5f4c3e29f40d82bd 229 SUPERFAMILY SSF52540 23 200 2.6E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_II0478 46efaab487b619663b1df1785ee2280e 178 Pfam PF07811 TadE-like protein 10 51 3.0E-6 T 14-10-2018 IPR012495 TadE-like VS_3004 f548ad0937d6c5315a81ac97995ae4f3 453 PIRSF PIRSF006603 10 452 2.6E-49 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_3004 f548ad0937d6c5315a81ac97995ae4f3 453 Pfam PF01554 MatE 256 408 1.4E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_3004 f548ad0937d6c5315a81ac97995ae4f3 453 Pfam PF01554 MatE 30 190 3.4E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_3004 f548ad0937d6c5315a81ac97995ae4f3 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 424 4.4E-77 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_II0105 a88d2a41f74a2b257de78786c7dd4613 188 SUPERFAMILY SSF53597 15 186 6.41E-34 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_II0105 a88d2a41f74a2b257de78786c7dd4613 188 Pfam PF01872 RibD C-terminal domain 15 179 5.0E-17 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VS_II0105 a88d2a41f74a2b257de78786c7dd4613 188 Gene3D G3DSA:3.40.430.10 13 186 1.3E-49 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VS_II1457 2e185ccc00cf79e6675832b77949ed41 173 Pfam PF11086 Protein of unknown function (DUF2878) 5 156 1.3E-36 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 SUPERFAMILY SSF81338 9 256 4.84E-74 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 1.6E-68 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 Pfam PF00230 Major intrinsic protein 6 252 5.2E-64 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 5.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VS_II0116 b3fae361dfbb44fca4f9f491652339fd 284 Gene3D G3DSA:1.20.1080.10 4 260 7.1E-97 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VS_0297 5ba6f79a93f269b29b94e90840d31e5d 247 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 15 247 1.0E-45 T 14-10-2018 IPR026387 Outer membrane protein VS_1662 cc6428c12be92ea014d3219869949986 211 Pfam PF11726 Inovirus Gp2 32 209 2.1E-70 T 14-10-2018 VS_1273 e982436d33b47e4b1b5723e888fa03c6 126 Gene3D G3DSA:3.90.1150.30 1 123 3.2E-9 T 14-10-2018 IPR038056 YjbR-like superfamily VS_1273 e982436d33b47e4b1b5723e888fa03c6 126 Pfam PF04237 YjbR 13 102 3.7E-12 T 14-10-2018 IPR007351 Uncharacterised protein YjbR VS_1273 e982436d33b47e4b1b5723e888fa03c6 126 SUPERFAMILY SSF142906 1 118 7.06E-28 T 14-10-2018 IPR038056 YjbR-like superfamily VS_2605 68a786bf146792e0d4c0c75f9cb74e6e 233 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 2.7E-80 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VS_2605 68a786bf146792e0d4c0c75f9cb74e6e 233 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VS_2605 68a786bf146792e0d4c0c75f9cb74e6e 233 SUPERFAMILY SSF53448 8 229 4.8E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2605 68a786bf146792e0d4c0c75f9cb74e6e 233 Gene3D G3DSA:3.90.550.10 2 233 1.2E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_2605 68a786bf146792e0d4c0c75f9cb74e6e 233 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 228 43.149 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VS_2605 68a786bf146792e0d4c0c75f9cb74e6e 233 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 228 4.4E-76 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VS_2643 15e86ca4fa2dae3c4c5d5e60ed67e7a3 209 Pfam PF01810 LysE type translocator 15 201 5.7E-40 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_3132 aa252bcb3216b9669645fd319b108ffe 184 Pfam PF11355 Protein of unknown function (DUF3157) 9 183 1.4E-43 T 14-10-2018 IPR021501 Protein of unknown function DUF3157 VS_II0076 be66e2ed8f04e9fb25fa089b80025635 502 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 321 1.2E-18 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_II0076 be66e2ed8f04e9fb25fa089b80025635 502 SUPERFAMILY SSF53850 126 312 6.15E-31 T 14-10-2018 VS_II0076 be66e2ed8f04e9fb25fa089b80025635 502 Pfam PF12793 Sugar transport-related sRNA regulator N-term 8 113 2.2E-23 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VS_II0076 be66e2ed8f04e9fb25fa089b80025635 502 Gene3D G3DSA:3.40.190.10 114 350 1.3E-25 T 14-10-2018 VS_II1177 a929307accf2e6b7adae5dcf16ea376f 152 SUPERFAMILY SSF52833 31 141 7.12E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_II1177 a929307accf2e6b7adae5dcf16ea376f 152 Pfam PF00578 AhpC/TSA family 31 132 1.3E-14 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VS_II1177 a929307accf2e6b7adae5dcf16ea376f 152 Gene3D G3DSA:3.40.30.10 17 144 1.7E-22 T 14-10-2018 VS_1715 0e20af0ef9c781be4235961c9afb4d17 225 Pfam PF04172 LrgB-like family 6 218 4.0E-73 T 14-10-2018 IPR007300 CidB/LrgB family VS_0891 fa5b7f866fa3f6e51992b3191692e80a 173 Pfam PF13673 Acetyltransferase (GNAT) domain 53 166 1.2E-10 T 14-10-2018 IPR000182 GNAT domain VS_0891 fa5b7f866fa3f6e51992b3191692e80a 173 Gene3D G3DSA:3.40.630.30 6 165 9.6E-33 T 14-10-2018 VS_0891 fa5b7f866fa3f6e51992b3191692e80a 173 SUPERFAMILY SSF55729 7 163 1.17E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_2466 30e9fd5e45bf104c778ce3e9251a5195 51 Pfam PF17320 Family of unknown function (DUF5363) 3 45 3.7E-7 T 14-10-2018 IPR035292 Protein of unknown function DUF5363 VS_3011 a237794bffc26186ee2183e34d2ca95c 139 SUPERFAMILY SSF48295 8 59 7.32E-12 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VS_2327 a237794bffc26186ee2183e34d2ca95c 139 SUPERFAMILY SSF48295 8 59 7.32E-12 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VS_II0091 a237794bffc26186ee2183e34d2ca95c 139 SUPERFAMILY SSF48295 8 59 7.32E-12 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VS_II1454 ca58bd4c0ce49b1d32cd99787960a090 423 Pfam PF01593 Flavin containing amine oxidoreductase 11 306 1.2E-20 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VS_II1454 ca58bd4c0ce49b1d32cd99787960a090 423 Gene3D G3DSA:3.50.50.60 1 140 1.3E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1454 ca58bd4c0ce49b1d32cd99787960a090 423 Gene3D G3DSA:3.50.50.60 147 298 4.8E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_II1454 ca58bd4c0ce49b1d32cd99787960a090 423 SUPERFAMILY SSF51905 2 409 4.86E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VS_1734 acf1b46d2ed8c73243a3e316fc0036c2 231 PIRSF PIRSF028137 1 231 5.6E-99 T 14-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane VS_1569 426308515d6e10cdd970c3f46af022f2 457 SUPERFAMILY SSF52151 67 383 4.19E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_1569 426308515d6e10cdd970c3f46af022f2 457 Pfam PF01734 Patatin-like phospholipase 71 302 4.2E-22 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VS_0422 35447ab9830e2e912c0b3de4304df85a 201 Pfam PF05728 Uncharacterised protein family (UPF0227) 14 199 2.5E-71 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VS_0422 35447ab9830e2e912c0b3de4304df85a 201 SUPERFAMILY SSF53474 6 200 1.4E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_0422 35447ab9830e2e912c0b3de4304df85a 201 Gene3D G3DSA:3.40.50.1820 13 201 2.5E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_1823 96a3766e21c352424a9f2100f65edbb8 236 Gene3D G3DSA:2.40.33.20 2 236 6.9E-69 T 14-10-2018 VS_1823 96a3766e21c352424a9f2100f65edbb8 236 SUPERFAMILY SSF50800 7 233 1.99E-69 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VS_1823 96a3766e21c352424a9f2100f65edbb8 236 Pfam PF03475 3-alpha domain 179 221 2.2E-10 T 14-10-2018 IPR005163 3-alpha domain VS_1823 96a3766e21c352424a9f2100f65edbb8 236 Pfam PF03473 MOSC domain 55 169 7.3E-21 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VS_0872 7f7a44bf76984c10d72976525694b376 485 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 453 4.7E-152 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VS_0872 7f7a44bf76984c10d72976525694b376 485 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 471 43.908 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VS_3051 af031d0e318cb63af91b9a55854c490d 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 6.9E-78 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VS_3051 af031d0e318cb63af91b9a55854c490d 842 PIRSF PIRSF001444 1 842 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VS_3051 af031d0e318cb63af91b9a55854c490d 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.0E-252 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VS_0974 448e648007bf26813f35aca0febf18fa 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.104 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VS_0974 448e648007bf26813f35aca0febf18fa 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.1E-138 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VS_0974 448e648007bf26813f35aca0febf18fa 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 9.2E-105 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VS_1825 acfe4875c01239da58e7d7183befa59a 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 8 410 1.3E-42 T 14-10-2018 IPR010352 Protein of unknown function DUF945 VS_II0435 0b779f644b66c97d38a1400fbdcc929f 379 ProSitePatterns PS00216 Sugar transport proteins signature 1. 39 56 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VS_II0435 0b779f644b66c97d38a1400fbdcc929f 379 Gene3D G3DSA:1.20.1250.20 1 367 4.6E-43 T 14-10-2018 VS_II0435 0b779f644b66c97d38a1400fbdcc929f 379 Pfam PF07690 Major Facilitator Superfamily 2 321 4.1E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II0435 0b779f644b66c97d38a1400fbdcc929f 379 SUPERFAMILY SSF103473 3 364 8.63E-49 T 14-10-2018 IPR036259 MFS transporter superfamily VS_1099 f4ce16ba3b07c040c601c246b98c0e4b 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 2.1E-56 T 14-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VS_1099 f4ce16ba3b07c040c601c246b98c0e4b 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 5.0E-109 T 14-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VS_II0203 46a281f0aa78bcd6b3b2d3d5187be572 297 SUPERFAMILY SSF158855 42 291 3.27E-62 T 14-10-2018 VS_II0203 46a281f0aa78bcd6b3b2d3d5187be572 297 Pfam PF03280 Proteobacterial lipase chaperone protein 96 280 1.3E-46 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VS_1665 0b5738f0a2da90fcb4f34f78487c3775 92 Pfam PF11726 Inovirus Gp2 33 90 1.6E-14 T 14-10-2018 VS_II0737 8d8bd8f0735d64c55cc6d2d32031d48c 292 Pfam PF11060 Protein of unknown function (DUF2861) 23 287 4.9E-96 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 VS_2002 c4fffac844d299f4f8d93746837f37e3 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 1.8E-158 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter VS_II1010 8e86e918192aca303792ceb85a4618cc 751 Gene3D G3DSA:3.30.1330.60 573 703 1.8E-19 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_II1010 8e86e918192aca303792ceb85a4618cc 751 Pfam PF00691 OmpA family 599 698 2.4E-11 T 14-10-2018 IPR006665 OmpA-like domain VS_II1010 8e86e918192aca303792ceb85a4618cc 751 SUPERFAMILY SSF103088 588 703 1.44E-18 T 14-10-2018 IPR036737 OmpA-like domain superfamily VS_0043 dcda15277e0fa89da1d473960142d9cb 485 PIRSF PIRSF006247 1 485 1.2E-176 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VS_0043 dcda15277e0fa89da1d473960142d9cb 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 4.6E-118 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VS_0043 dcda15277e0fa89da1d473960142d9cb 485 Pfam PF02386 Cation transport protein 39 477 2.2E-91 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VS_1093 d7b449cb76f02c3f8a2cd12bd5ef305e 261 SUPERFAMILY SSF53335 6 250 4.34E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_1093 d7b449cb76f02c3f8a2cd12bd5ef305e 261 Gene3D G3DSA:3.40.50.150 9 260 3.3E-57 T 14-10-2018 VS_1093 d7b449cb76f02c3f8a2cd12bd5ef305e 261 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.382 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VS_1093 d7b449cb76f02c3f8a2cd12bd5ef305e 261 Pfam PF08241 Methyltransferase domain 52 148 1.1E-12 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VS_2804 f079a3b376385a8a9fe4f17ad2b79ccf 168 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 14 163 3.9E-21 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VS_0826 4dd538fc3a5dd8c10a2a54f05c2684c9 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_0826 4dd538fc3a5dd8c10a2a54f05c2684c9 439 Gene3D G3DSA:3.40.50.12240 18 439 1.6E-157 T 14-10-2018 VS_0826 4dd538fc3a5dd8c10a2a54f05c2684c9 439 SUPERFAMILY SSF52540 93 362 1.67E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VS_0826 4dd538fc3a5dd8c10a2a54f05c2684c9 439 SMART SM00382 158 342 2.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VS_0826 4dd538fc3a5dd8c10a2a54f05c2684c9 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 7.0E-176 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_0826 4dd538fc3a5dd8c10a2a54f05c2684c9 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 6.8E-74 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_0826 4dd538fc3a5dd8c10a2a54f05c2684c9 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 1.1E-195 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VS_2392 6292ea9a8a2f7426cff739aab04c1acc 521 Gene3D G3DSA:3.30.70.270 354 520 5.5E-43 T 14-10-2018 VS_2392 6292ea9a8a2f7426cff739aab04c1acc 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 519 1.6E-37 T 14-10-2018 IPR000160 GGDEF domain VS_2392 6292ea9a8a2f7426cff739aab04c1acc 521 SUPERFAMILY SSF55073 366 520 5.57E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VS_2392 6292ea9a8a2f7426cff739aab04c1acc 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.1E-37 T 14-10-2018 IPR000160 GGDEF domain VS_2392 6292ea9a8a2f7426cff739aab04c1acc 521 SMART SM00267 351 521 1.1E-38 T 14-10-2018 IPR000160 GGDEF domain VS_II0313 a31d32d16793952e211114bb25633cf8 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 3.1E-134 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VS_1308 ffa5785398125e2e9d479c1f1fc7438b 137 Gene3D G3DSA:1.10.720.30 19 78 8.7E-27 T 14-10-2018 IPR036361 SAP domain superfamily VS_1308 ffa5785398125e2e9d479c1f1fc7438b 137 Pfam PF09905 DNA-binding protein VF530 11 73 1.1E-31 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VS_0774 7308a12b751d30b38c25061a2449e1bf 207 Pfam PF11659 Protein of unknown function (DUF3261) 54 196 2.2E-36 T 14-10-2018 IPR021675 Protein of unknown function DUF3261 VS_2922 0013d0328fe3d395b7174b626d4fcfcb 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 4.4E-180 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VS_2922 0013d0328fe3d395b7174b626d4fcfcb 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 6.3E-145 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VS_2922 0013d0328fe3d395b7174b626d4fcfcb 435 PIRSF PIRSF004539 1 435 7.7E-178 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VS_II1118 6a34d0b5efefe0dda1d2fcb48116565e 88 Pfam PF11280 Protein of unknown function (DUF3081) 5 80 1.1E-28 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 VS_1802 787bd7be5c9ac0ef1fefab6db1e32fd9 199 Gene3D G3DSA:3.90.79.10 8 193 1.4E-45 T 14-10-2018 VS_1802 787bd7be5c9ac0ef1fefab6db1e32fd9 199 SUPERFAMILY SSF55811 34 190 7.99E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VS_1802 787bd7be5c9ac0ef1fefab6db1e32fd9 199 Pfam PF00293 NUDIX domain 35 145 2.2E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VS_II0507 671472a221a54f2c98c55b800bb4db63 370 Gene3D G3DSA:3.20.20.70 1 367 4.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_II0507 671472a221a54f2c98c55b800bb4db63 370 SUPERFAMILY SSF51395 2 352 4.23E-99 T 14-10-2018 VS_II0507 671472a221a54f2c98c55b800bb4db63 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 336 2.4E-66 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VS_0786 dae6cd21fd23b83d7ce95ab78d87e760 256 SUPERFAMILY SSF69593 51 239 6.93E-22 T 14-10-2018 VS_0786 dae6cd21fd23b83d7ce95ab78d87e760 256 SMART SM00563 86 196 1.5E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_0786 dae6cd21fd23b83d7ce95ab78d87e760 256 Pfam PF01553 Acyltransferase 73 189 2.3E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VS_II1342 ef2d877e03b5130f2a69fef84e1b9132 480 SUPERFAMILY SSF48208 24 445 5.7E-51 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VS_II1342 ef2d877e03b5130f2a69fef84e1b9132 480 Gene3D G3DSA:1.50.10.10 69 431 2.8E-19 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VS_0574 25cd59dfc4d10b556087a8a5a92ea087 279 Pfam PF03411 Penicillin-insensitive murein endopeptidase 34 276 4.8E-95 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VS_0574 25cd59dfc4d10b556087a8a5a92ea087 279 SUPERFAMILY SSF55166 19 278 6.67E-92 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_0574 25cd59dfc4d10b556087a8a5a92ea087 279 PIRSF PIRSF018455 4 279 4.8E-109 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VS_0574 25cd59dfc4d10b556087a8a5a92ea087 279 Gene3D G3DSA:3.30.1380.10 18 279 3.4E-97 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_2147 e2aac5a488dfe1aa9ac638a60db6e2ab 155 Pfam PF11911 Protein of unknown function (DUF3429) 14 153 6.4E-30 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 VS_0222 698ce81abb1a89b22fab167510f85504 263 Pfam PF01973 Protein of unknown function DUF115 34 193 1.1E-14 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like VS_1080 3fc8f912b62c14f2c5edcc893558a4a1 81 Pfam PF10692 Protein of unknown function (DUF2498) 3 79 7.1E-41 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 VS_1080 3fc8f912b62c14f2c5edcc893558a4a1 81 Gene3D G3DSA:1.10.1900.30 8 75 9.3E-35 T 14-10-2018 IPR038191 YciN superfamily VS_1057 fdc1e5637921dabe2836d920c0a045cf 225 SUPERFAMILY SSF161098 11 203 3.92E-40 T 14-10-2018 IPR035906 MetI-like superfamily VS_1057 fdc1e5637921dabe2836d920c0a045cf 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 217 5.8E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_1057 fdc1e5637921dabe2836d920c0a045cf 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 4.5E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_1057 fdc1e5637921dabe2836d920c0a045cf 225 Gene3D G3DSA:1.10.3720.10 1 218 6.9E-49 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0880 85c3fccd304c7e39b8833715d3e2eaa8 520 Pfam PF00884 Sulfatase 27 352 8.7E-65 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VS_II0880 85c3fccd304c7e39b8833715d3e2eaa8 520 Gene3D G3DSA:3.40.720.10 24 427 1.3E-94 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VS_II0880 85c3fccd304c7e39b8833715d3e2eaa8 520 SUPERFAMILY SSF53649 23 478 4.07E-116 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VS_1312 796aed8347d4f4cf3639eca8b8ff4ba1 191 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 46 182 8.1E-15 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 VS_1461 f9a5e29f4ad7f6377da82b8c9419fb8a 58 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 1.2E-9 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VS_0218 59a4fa7ba9a1898dc3858f82c8691daf 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 239 8.5E-61 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VS_0218 59a4fa7ba9a1898dc3858f82c8691daf 250 Pfam PF02348 Cytidylyltransferase 5 219 1.6E-49 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VS_0218 59a4fa7ba9a1898dc3858f82c8691daf 250 SUPERFAMILY SSF53448 1 247 6.31E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0218 59a4fa7ba9a1898dc3858f82c8691daf 250 Gene3D G3DSA:3.90.550.10 3 249 5.2E-75 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0218 59a4fa7ba9a1898dc3858f82c8691daf 250 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 246 35.557 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VS_II1341 7e19bb7e05c0cedf3eccefc4c9c77328 201 Pfam PF11188 Protein of unknown function (DUF2975) 78 201 1.4E-14 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 VS_II1406 e6c7803e93fc0c1b0daba67be870841a 161 Pfam PF13673 Acetyltransferase (GNAT) domain 53 140 3.8E-10 T 14-10-2018 IPR000182 GNAT domain VS_II1406 e6c7803e93fc0c1b0daba67be870841a 161 Gene3D G3DSA:3.40.630.30 3 148 8.1E-18 T 14-10-2018 VS_II1406 e6c7803e93fc0c1b0daba67be870841a 161 SUPERFAMILY SSF55729 32 144 7.6E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_0795 5527f2ee67d4af399bc9c3bd4b6378ba 141 Pfam PF05130 FlgN protein 2 131 1.3E-24 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VS_0795 5527f2ee67d4af399bc9c3bd4b6378ba 141 SUPERFAMILY SSF140566 1 113 6.8E-21 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VS_0795 5527f2ee67d4af399bc9c3bd4b6378ba 141 Gene3D G3DSA:1.20.58.300 1 113 6.9E-9 T 14-10-2018 VS_II1001 41177646e1b020984b0ff45e2e09d32b 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 2.7E-63 T 14-10-2018 IPR018683 Domain of unknown function DUF2169 VS_1668 1ffb25bc26aa22a3ac53ebfe33dec76c 63 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 56 2.0E-19 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VS_0639 cbd33a0e53ddca5c0b3c34ef4ede9dd5 269 Gene3D G3DSA:3.30.1380.10 55 214 9.5E-20 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_0639 cbd33a0e53ddca5c0b3c34ef4ede9dd5 269 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 125 214 4.2E-20 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 VS_0639 cbd33a0e53ddca5c0b3c34ef4ede9dd5 269 SUPERFAMILY SSF55166 53 215 2.47E-27 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VS_2216 6308f7706cb6af2f0d5c4cf3823e8cdd 677 Gene3D G3DSA:3.30.70.250 428 508 3.3E-23 T 14-10-2018 VS_2216 6308f7706cb6af2f0d5c4cf3823e8cdd 677 Gene3D G3DSA:3.40.366.10 305 620 3.3E-23 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VS_2216 6308f7706cb6af2f0d5c4cf3823e8cdd 677 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 309 622 1.5E-4 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VS_2216 6308f7706cb6af2f0d5c4cf3823e8cdd 677 SUPERFAMILY SSF52151 306 608 3.4E-28 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VS_2216 6308f7706cb6af2f0d5c4cf3823e8cdd 677 Gene3D G3DSA:3.30.70.3290 200 647 3.3E-23 T 14-10-2018 VS_2216 6308f7706cb6af2f0d5c4cf3823e8cdd 677 TIGRFAM TIGR02816 pfaB_fam: PfaB family protein 150 650 2.2E-247 T 14-10-2018 IPR014181 Omega-3 polyunsaturated fatty acid synthase-like VS_0638 bc7b2916ee26a9a0f2f5c1306d91f31e 242 Pfam PF04250 Protein of unknown function (DUF429) 5 208 6.7E-43 T 14-10-2018 IPR007362 Protein of unknown function DUF429 VS_0712 249dad3ebb792afb0d2a2829ceabb08f 373 Pfam PF01098 Cell cycle protein 23 367 6.8E-111 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0712 249dad3ebb792afb0d2a2829ceabb08f 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 27.645 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0712 249dad3ebb792afb0d2a2829ceabb08f 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0712 249dad3ebb792afb0d2a2829ceabb08f 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 4.0E-132 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0231 6bfe8c960bad66cae869af0cbf5cb4cb 311 SUPERFAMILY SSF53448 6 225 4.5E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0231 6bfe8c960bad66cae869af0cbf5cb4cb 311 Gene3D G3DSA:3.90.550.10 1 252 1.8E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0231 6bfe8c960bad66cae869af0cbf5cb4cb 311 Pfam PF00535 Glycosyl transferase family 2 10 141 2.3E-12 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VS_II1459 d38173c39599dc7c40040977d85613c6 180 Pfam PF12915 Protein of unknown function (DUF3833) 18 179 5.3E-65 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 VS_1679 d907574acc303ef8393bb25e58f043c7 450 Pfam PF05971 Protein of unknown function (DUF890) 123 439 1.3E-127 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VS_1679 d907574acc303ef8393bb25e58f043c7 450 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 122 441 54.709 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VS_1679 d907574acc303ef8393bb25e58f043c7 450 Gene3D G3DSA:3.40.50.150 156 439 1.0E-77 T 14-10-2018 VS_1679 d907574acc303ef8393bb25e58f043c7 450 SUPERFAMILY SSF53335 161 438 6.67E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VS_3087 bb35e7478f7d12c46a9d0b45971dd96b 255 Pfam PF09836 Putative DNA-binding domain 8 96 1.2E-22 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria VS_1463 13bfed9d8f1adb26a39eae830c98da5a 159 Pfam PF05751 FixH 7 147 4.7E-43 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH VS_2435 8f6dbd8a8d3bc7ed7620b32db7dd8034 323 Pfam PF00482 Type II secretion system (T2SS), protein F 177 305 1.0E-21 T 14-10-2018 IPR018076 Type II secretion system F domain VS_2435 8f6dbd8a8d3bc7ed7620b32db7dd8034 323 Gene3D G3DSA:1.20.81.30 167 283 4.4E-5 T 14-10-2018 VS_II0757 8af4e0fbaeb9fc514d861049b3c3a38f 812 Pfam PF02687 FtsX-like permease family 720 800 4.1E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VS_1860 a2a8a4cdcc6d8e5a4f83bf2a670a2cc6 242 Pfam PF00535 Glycosyl transferase family 2 5 115 4.3E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VS_1860 a2a8a4cdcc6d8e5a4f83bf2a670a2cc6 242 SUPERFAMILY SSF53448 3 224 2.53E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_1860 a2a8a4cdcc6d8e5a4f83bf2a670a2cc6 242 Gene3D G3DSA:3.90.550.10 1 202 1.4E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 SUPERFAMILY SSF55174 8 99 4.21E-15 T 14-10-2018 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 Gene3D G3DSA:3.30.70.1560 133 206 8.2E-54 T 14-10-2018 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 Pfam PF01479 S4 domain 9 53 9.4E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 SUPERFAMILY SSF55120 67 228 1.55E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 Gene3D G3DSA:3.10.290.10 4 63 8.9E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 224 9.5E-48 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 Gene3D G3DSA:3.30.70.580 69 228 8.2E-54 T 14-10-2018 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 SMART SM00363 8 67 2.0E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VS_0759 14657e9ae7a8dbfdc0a2f49818db013b 379 Pfam PF00849 RNA pseudouridylate synthase 68 194 1.4E-13 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VS_0449 f76808c2e0aedad5d200a7fc402d6d7a 398 Pfam PF01098 Cell cycle protein 27 381 8.0E-113 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0449 f76808c2e0aedad5d200a7fc402d6d7a 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 25 381 1.8E-128 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0449 f76808c2e0aedad5d200a7fc402d6d7a 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 340 364 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_0449 f76808c2e0aedad5d200a7fc402d6d7a 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 23 390 41.226 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VS_II1381 3c978beacbd59be3cd6e2ebaf148643a 239 SUPERFAMILY SSF55486 100 186 8.67E-5 T 14-10-2018 VS_0877 35f3c5dc4cb73c91f3e5da4f6d8c94a0 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 1.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0877 35f3c5dc4cb73c91f3e5da4f6d8c94a0 285 SUPERFAMILY SSF161098 8 285 4.21E-65 T 14-10-2018 IPR035906 MetI-like superfamily VS_0877 35f3c5dc4cb73c91f3e5da4f6d8c94a0 285 Gene3D G3DSA:1.10.3720.10 2 276 9.1E-54 T 14-10-2018 IPR035906 MetI-like superfamily VS_1389 67c98f62cd01be080009ff6b1c0dacb4 501 SUPERFAMILY SSF56349 229 471 3.77E-11 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VS_1389 67c98f62cd01be080009ff6b1c0dacb4 501 Gene3D G3DSA:1.10.443.10 222 473 3.4E-20 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VS_1310 5409e4d3f16590b8a3e832423f06a373 257 Pfam PF01925 Sulfite exporter TauE/SafE 11 252 2.1E-36 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VS_2912 dba570812fd2a4756294f27db9276aa1 256 Gene3D G3DSA:3.20.20.70 1 256 7.8E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2912 dba570812fd2a4756294f27db9276aa1 256 Pfam PF00121 Triosephosphate isomerase 5 247 5.1E-85 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2912 dba570812fd2a4756294f27db9276aa1 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2912 dba570812fd2a4756294f27db9276aa1 256 SUPERFAMILY SSF51351 2 251 1.3E-87 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2912 dba570812fd2a4756294f27db9276aa1 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 58.2 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_2912 dba570812fd2a4756294f27db9276aa1 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 7.6E-79 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VS_II1326 ed856a773f9607b3f034fa8887a02a14 489 Pfam PF06054 Competence protein CoiA-like family 31 75 1.0E-6 T 14-10-2018 IPR010330 Competence-induced protein CoiA-like VS_3131 c795237efbda96eabf3fef8cbe2d5db6 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 3.2E-112 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VS_3131 c795237efbda96eabf3fef8cbe2d5db6 481 PIRSF PIRSF006247 1 481 2.1E-163 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VS_3131 c795237efbda96eabf3fef8cbe2d5db6 481 Pfam PF02386 Cation transport protein 51 475 7.5E-49 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VS_2566 e5e96e4729f5a18c9730d7414fc52873 153 Pfam PF09335 SNARE associated Golgi protein 49 146 4.2E-11 T 14-10-2018 IPR032816 SNARE associated Golgi protein VS_II0976 cedd9df89d3f0afd5fc4ec096417ffc0 436 Pfam PF13665 Domain of unknown function (DUF4150) 4 68 2.5E-18 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_II0881 2e71e7d3bc3dd1d97d4cca57ffbac1c3 217 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 217 25.555 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VS_II0881 2e71e7d3bc3dd1d97d4cca57ffbac1c3 217 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 25 212 7.2E-54 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VS_2531 f0f8dc02591155ed2b7b6959a55bac18 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 5.3E-38 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_2531 f0f8dc02591155ed2b7b6959a55bac18 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_2531 f0f8dc02591155ed2b7b6959a55bac18 161 Gene3D G3DSA:3.30.70.560 1 159 2.3E-59 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_2531 f0f8dc02591155ed2b7b6959a55bac18 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.9E-46 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_2531 f0f8dc02591155ed2b7b6959a55bac18 161 SUPERFAMILY SSF55083 1 158 3.01E-54 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VS_1943 294a11810736f446915f5161dbf037c7 288 Pfam PF13084 Domain of unknown function (DUF3943) 125 234 4.8E-37 T 14-10-2018 IPR025079 Domain of unknown function DUF3943 VS_II1427 5bb2bfefc021d736c6f095fc8e0c954d 245 Pfam PF07670 Nucleoside recognition 85 179 1.1E-10 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_2425 af7a87e43b827f6f397a14a49c64b1e8 105 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 7.4E-35 T 14-10-2018 IPR022069 Protein of unknown function DUF3622 VS_0829 29d8718cece726afa575335242298aca 162 Pfam PF03748 Flagellar basal body-associated protein FliL 61 162 1.1E-18 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VS_II1455 b006eb18be861a8e39651277b98d2fbe 268 Pfam PF07103 Protein of unknown function (DUF1365) 23 265 1.4E-68 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 VS_II0779 1836b6da0f5ed712ecc86474f7669f07 348 Pfam PF03741 Integral membrane protein TerC family 108 309 3.4E-53 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VS_II0779 1836b6da0f5ed712ecc86474f7669f07 348 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 37 340 1.8E-104 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 VS_II0984 faf2e262d41c1e66d0a585619b369c9f 505 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 1.8E-34 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_2277 5d57dc19cfa35b92a11f79b2bf65e079 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 2.5E-72 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 VS_II1293 1001a3c9527657a535f46b3a15fb2ad3 256 SUPERFAMILY SSF56235 2 250 7.29E-35 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_II1293 1001a3c9527657a535f46b3a15fb2ad3 256 Gene3D G3DSA:3.60.20.10 1 255 6.9E-86 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VS_II1293 1001a3c9527657a535f46b3a15fb2ad3 256 Pfam PF13230 Glutamine amidotransferases class-II 28 198 3.1E-18 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VS_1722 52a56bae0d033ce05aa3ee4f4328c82a 334 SUPERFAMILY SSF103481 80 169 5.49E-6 T 14-10-2018 VS_1722 52a56bae0d033ce05aa3ee4f4328c82a 334 SUPERFAMILY SSF103481 222 319 6.67E-9 T 14-10-2018 VS_1722 52a56bae0d033ce05aa3ee4f4328c82a 334 Pfam PF00892 EamA-like transporter family 44 168 4.1E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_1722 52a56bae0d033ce05aa3ee4f4328c82a 334 Pfam PF00892 EamA-like transporter family 179 317 1.4E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_II0004 bb0022f7f4e88230e280efc866477c9a 556 Pfam PF03961 Flagellar Assembly Protein A 81 543 1.6E-120 T 14-10-2018 IPR005646 Flagellar assembly protein A VS_1277 71862f1b43f134d08e1437b483c60f5d 166 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 27 164 2.0E-15 T 14-10-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0016020|GO:0038023 VS_0542 a609e625cf14ca781ce7a37fa3eb7407 497 Pfam PF02554 Carbon starvation protein CstA 4 144 2.6E-33 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VS_0542 a609e625cf14ca781ce7a37fa3eb7407 497 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 2.0E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain VS_2920 655556f2f8e5b55e949757bb085fa542 174 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 2.1E-35 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VS_II0427 4d4b5ece274f2e850694af52f2311c95 336 SUPERFAMILY SSF103481 41 138 1.44E-12 T 14-10-2018 VS_II0427 4d4b5ece274f2e850694af52f2311c95 336 SUPERFAMILY SSF103481 187 306 8.89E-7 T 14-10-2018 VS_II0427 4d4b5ece274f2e850694af52f2311c95 336 Pfam PF00892 EamA-like transporter family 8 136 8.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VS_1447 e39900b20f13f3106501dc75408db57b 170 SUPERFAMILY SSF46689 17 123 1.16E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II0545 c82efac5374eb988f22244923d24feb0 544 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 53 535 5.1E-145 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_0220 b5cd6e25bfcb78d73fceb22f44e0500c 488 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 28 475 8.8E-15 T 14-10-2018 IPR029468 O-antigen polysaccharide polymerase Wzy VS_II0134 9bce4367deeb3650a7fc1ba295eb2208 399 Gene3D G3DSA:1.20.1250.20 209 396 5.7E-35 T 14-10-2018 VS_II0134 9bce4367deeb3650a7fc1ba295eb2208 399 Gene3D G3DSA:1.20.1250.20 8 206 8.7E-32 T 14-10-2018 VS_II0134 9bce4367deeb3650a7fc1ba295eb2208 399 Pfam PF07690 Major Facilitator Superfamily 16 361 4.2E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II0134 9bce4367deeb3650a7fc1ba295eb2208 399 SUPERFAMILY SSF103473 10 396 7.72E-36 T 14-10-2018 IPR036259 MFS transporter superfamily VS_1300 8ab64589c5175f4ba301ff372a1c5902 484 Pfam PF02321 Outer membrane efflux protein 274 454 2.3E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1300 8ab64589c5175f4ba301ff372a1c5902 484 Pfam PF02321 Outer membrane efflux protein 32 251 2.9E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VS_1300 8ab64589c5175f4ba301ff372a1c5902 484 Gene3D G3DSA:1.20.1600.10 24 461 1.5E-62 T 14-10-2018 VS_1300 8ab64589c5175f4ba301ff372a1c5902 484 SUPERFAMILY SSF56954 2 454 1.7E-70 T 14-10-2018 VS_II0269 2a808a17c1e26cd3f106def8e74809f7 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.3E-164 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_II0269 2a808a17c1e26cd3f106def8e74809f7 535 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VS_II0269 2a808a17c1e26cd3f106def8e74809f7 535 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 6.2E-128 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_II0523 a6993535d9864a02331d143ba99df763 387 Pfam PF12821 Threonine/Serine exporter, ThrE 258 377 5.3E-8 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE VS_II0523 a6993535d9864a02331d143ba99df763 387 Pfam PF06738 Putative threonine/serine exporter 97 230 1.9E-13 T 14-10-2018 IPR010619 Putative threonine/serine exporter VS_1191 663bd2c54db36cf933f75c53ef2827ce 219 Gene3D G3DSA:2.60.120.620 1 216 7.8E-53 T 14-10-2018 VS_1191 663bd2c54db36cf933f75c53ef2827ce 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 1.7E-54 T 14-10-2018 IPR018724 2OG-Fe dioxygenase VS_II0629 4bcd48dfc281bbeed997fbe2eb99f298 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 18 105 4.3E-19 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VS_II0629 4bcd48dfc281bbeed997fbe2eb99f298 553 Gene3D G3DSA:3.40.190.10 120 315 1.0E-24 T 14-10-2018 VS_II0629 4bcd48dfc281bbeed997fbe2eb99f298 553 SUPERFAMILY SSF53850 128 552 2.48E-36 T 14-10-2018 VS_II0629 4bcd48dfc281bbeed997fbe2eb99f298 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 175 303 3.9E-12 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VS_0076 d9ce3f54bbaeed06df77aac742767954 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 1.6E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0076 d9ce3f54bbaeed06df77aac742767954 325 SUPERFAMILY SSF161098 89 302 1.83E-14 T 14-10-2018 IPR035906 MetI-like superfamily VS_0076 d9ce3f54bbaeed06df77aac742767954 325 Gene3D G3DSA:1.10.3720.10 84 314 2.0E-16 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0681 ee4b5590bed500083887517459538be3 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 1.5E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VS_II0681 ee4b5590bed500083887517459538be3 134 Gene3D G3DSA:3.30.420.270 61 129 4.3E-11 T 14-10-2018 VS_2995 19b97064ab42fca20273db8b008c2074 150 SUPERFAMILY SSF54928 48 140 6.85E-27 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VS_2995 19b97064ab42fca20273db8b008c2074 150 SMART SM00360 62 134 7.2E-20 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VS_2995 19b97064ab42fca20273db8b008c2074 150 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 132 4.8E-18 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VS_2995 19b97064ab42fca20273db8b008c2074 150 Gene3D G3DSA:3.30.70.330 43 148 8.8E-27 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VS_II0788 821b9914b5a3a8d6a61bf83bd2de34f0 223 Gene3D G3DSA:2.40.128.110 57 223 9.1E-47 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VS_II0788 821b9914b5a3a8d6a61bf83bd2de34f0 223 Pfam PF04264 YceI-like domain 59 216 1.1E-33 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VS_II0788 821b9914b5a3a8d6a61bf83bd2de34f0 223 SMART SM00867 58 221 1.2E-59 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VS_II0788 821b9914b5a3a8d6a61bf83bd2de34f0 223 SUPERFAMILY SSF101874 56 222 1.29E-47 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VS_II0788 821b9914b5a3a8d6a61bf83bd2de34f0 223 Hamap MF_00780 Protein YceI [yceI]. 35 223 45.016 T 14-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI VS_II0053 13f0510ddb01b9cf06ec1c5c3ecdf713 180 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 157 2.0E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VS_II0707 d311eb978a1795aad8b3481dbb80ad3f 158 Pfam PF04143 Sulphur transport 5 142 7.5E-10 T 14-10-2018 IPR007272 Sulphur transport domain VS_1432 3f36e178a269b09aa0810d4558be62dc 102 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 1.0E-40 T 14-10-2018 IPR022090 Protein of unknown function DUF3634 VS_II0206 5dff74afc81345c08ed161f8af37f439 309 SUPERFAMILY SSF161098 33 304 2.49E-35 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0206 5dff74afc81345c08ed161f8af37f439 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 305 6.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_II0206 5dff74afc81345c08ed161f8af37f439 309 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 32 306 3.5E-90 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VS_II0206 5dff74afc81345c08ed161f8af37f439 309 Gene3D G3DSA:1.10.3720.10 84 308 2.8E-32 T 14-10-2018 IPR035906 MetI-like superfamily VS_3096 bac01bc1c42ed7679d80dccf8b503b70 260 SUPERFAMILY SSF69572 2 248 3.14E-75 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VS_3096 bac01bc1c42ed7679d80dccf8b503b70 260 Pfam PF00899 ThiF family 10 245 2.5E-58 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VS_3096 bac01bc1c42ed7679d80dccf8b503b70 260 Gene3D G3DSA:3.40.50.720 2 254 6.6E-87 T 14-10-2018 VS_1056 75a0458c68be088723d46602bbd723ff 246 Gene3D G3DSA:1.10.3720.10 3 243 2.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily VS_1056 75a0458c68be088723d46602bbd723ff 246 SUPERFAMILY SSF161098 11 233 1.7E-38 T 14-10-2018 IPR035906 MetI-like superfamily VS_1056 75a0458c68be088723d46602bbd723ff 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.1E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VS_1056 75a0458c68be088723d46602bbd723ff 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 4.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0114 f1cffd06a547b9f15f07489aabbe3730 185 Pfam PF04220 Der GTPase activator (YihI) 21 175 1.8E-45 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VS_0114 f1cffd06a547b9f15f07489aabbe3730 185 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 178 16.341 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VS_1786 99366067324ef9737327e9ffb9c55ad5 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 2.8E-53 T 14-10-2018 IPR021212 Domain of unknown function DUF2760 VS_2421 1586210ac86a53fb0da12f6b95bc9920 429 Pfam PF00860 Permease family 17 391 1.2E-54 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VS_2421 1586210ac86a53fb0da12f6b95bc9920 429 PIRSF PIRSF005353 1 429 1.6E-187 T 14-10-2018 IPR026033 Purine permease PbuG-like VS_II0248 934df302eca3686438aacee4f17ea4bf 320 SUPERFAMILY SSF53850 39 318 1.7E-31 T 14-10-2018 VS_II0248 934df302eca3686438aacee4f17ea4bf 320 Gene3D G3DSA:3.40.190.10 47 281 6.9E-29 T 14-10-2018 VS_II0248 934df302eca3686438aacee4f17ea4bf 320 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 42 299 1.6E-53 T 14-10-2018 VS_II0248 934df302eca3686438aacee4f17ea4bf 320 Gene3D G3DSA:3.40.190.10 127 249 6.9E-29 T 14-10-2018 VS_II0170 203cd61cdaf1be1cfff7a5794e3e8f31 212 Pfam PF01810 LysE type translocator 35 205 9.9E-14 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_0704 73b6c14234cf075754ba2a1cae4a0e04 157 SUPERFAMILY SSF54534 78 156 5.36E-10 T 14-10-2018 VS_0704 73b6c14234cf075754ba2a1cae4a0e04 157 Gene3D G3DSA:3.10.50.30 75 157 1.2E-6 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VS_0704 73b6c14234cf075754ba2a1cae4a0e04 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 3.4E-8 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VS_1989 b1a84e9ad5757afa31dbcdb1426a6662 138 Pfam PF04024 PspC domain 13 71 2.4E-15 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VS_1989 b1a84e9ad5757afa31dbcdb1426a6662 138 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 12 137 4.8E-45 T 14-10-2018 IPR014320 Phage shock protein, PspC VS_2310 f2f0a5959b9f0d9ce1bbc29c614f64b6 79 Pfam PF01206 Sulfurtransferase TusA 5 72 6.5E-14 T 14-10-2018 IPR001455 TusA-like domain VS_2310 f2f0a5959b9f0d9ce1bbc29c614f64b6 79 SUPERFAMILY SSF64307 5 72 1.57E-11 T 14-10-2018 IPR036868 TusA-like domain superfamily VS_2310 f2f0a5959b9f0d9ce1bbc29c614f64b6 79 Gene3D G3DSA:3.30.110.40 2 73 1.7E-9 T 14-10-2018 IPR036868 TusA-like domain superfamily VS_0848 11f9c35eda8844dc787a6df8363d2f04 170 Pfam PF10975 Protein of unknown function (DUF2802) 68 134 5.8E-22 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 VS_0189 5b6b4bdd9db3de01da815eeb893f5ff9 439 SUPERFAMILY SSF53756 116 404 3.53E-6 T 14-10-2018 VS_0189 5b6b4bdd9db3de01da815eeb893f5ff9 439 Gene3D G3DSA:3.40.50.2000 221 411 6.4E-55 T 14-10-2018 VS_0189 5b6b4bdd9db3de01da815eeb893f5ff9 439 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 36 214 1.9E-60 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VS_0189 5b6b4bdd9db3de01da815eeb893f5ff9 439 Gene3D G3DSA:3.40.50.11720 37 213 9.4E-47 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VS_2792 b001bb4ced213846964214f986f28c74 377 SUPERFAMILY SSF56059 113 317 1.4E-10 T 14-10-2018 VS_3159 c1f93c854f0ea1182a2c17904ce2eac3 129 Pfam PF03899 ATP synthase I chain 15 111 4.1E-17 T 14-10-2018 IPR005598 ATP synthase protein I VS_II0565 33f96ba1ad1384de572ee37661eb81b3 341 Pfam PF03595 Voltage-dependent anion channel 26 319 2.0E-27 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VS_II0565 33f96ba1ad1384de572ee37661eb81b3 341 Gene3D G3DSA:1.50.10.150 20 326 5.4E-35 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VS_II1444 6a69191aa08e535e7e9af05e2fa54714 654 Pfam PF01757 Acyltransferase family 6 321 2.9E-26 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VS_II0392 5eb2dbe07def87ed30a6b639826f7db3 455 Pfam PF02386 Cation transport protein 18 438 3.6E-54 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VS_II0392 5eb2dbe07def87ed30a6b639826f7db3 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 1.4E-119 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VS_0793 7b0567b8b88a34450806d0034966aaee 211 PIRSF PIRSF028688 1 211 7.8E-116 T 14-10-2018 IPR014549 Flagellar protein FlgO VS_3134 d9969af167f7e6766f21ad250b2dfe8f 265 Pfam PF07070 SpoOM protein 6 221 9.9E-76 T 14-10-2018 IPR009776 Sporulation stage 0, protein M VS_2095 dd26850e5cb0c3e5abba9b4df543cb89 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 9.2E-97 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VS_2095 dd26850e5cb0c3e5abba9b4df543cb89 365 Gene3D G3DSA:3.20.20.70 1 365 5.6E-139 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VS_2095 dd26850e5cb0c3e5abba9b4df543cb89 365 SUPERFAMILY SSF51395 3 363 6.33E-123 T 14-10-2018 VS_0376 443c9d63d4d60ee6ab99ed3180391628 275 Pfam PF04784 Protein of unknown function, DUF547 104 213 6.4E-22 T 14-10-2018 IPR006869 Domain of unknown function DUF547 VS_0274 583dfe7a1bafb21577fed07244465043 79 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 22 76 4.4E-23 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 VS_2560 42045f1de057dc7d94c5e48347b26ddc 264 Pfam PF01578 Cytochrome C assembly protein 38 262 5.2E-44 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VS_1654 2db668835936371dbf5bc8b696581f8b 71 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 61 1.9E-22 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VS_1470 321db10b40e84db0e6019a5aa85f17c9 216 Pfam PF11205 Protein of unknown function (DUF2987) 22 164 1.5E-52 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 VS_2589 6c3bbfa6c2a0e10fb406ce92f4b34dc6 343 Pfam PF16941 Putative cyclodextrin porin 3 343 1.6E-208 T 14-10-2018 IPR031609 Cyclodextrin porin CymA GO:0098657 VS_II1161 c1b13863975670a5ae72d1ad9e2512be 278 PIRSF PIRSF028200 3 278 3.7E-75 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 VS_II1505 9071511de13ae37464f182acd375259f 88 Pfam PF11686 Protein of unknown function (DUF3283) 23 83 5.1E-35 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 VS_2799 18725a8329754c99b45d040cb61c506a 150 Gene3D G3DSA:3.40.630.30 1 148 3.7E-42 T 14-10-2018 VS_2799 18725a8329754c99b45d040cb61c506a 150 Pfam PF13673 Acetyltransferase (GNAT) domain 54 149 3.2E-15 T 14-10-2018 IPR000182 GNAT domain VS_2799 18725a8329754c99b45d040cb61c506a 150 SUPERFAMILY SSF55729 1 149 2.2E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VS_1579 61855cc95ca209e7d07189b885e5fdd9 238 SUPERFAMILY SSF56784 3 231 2.57E-24 T 14-10-2018 IPR036412 HAD-like superfamily VS_1579 61855cc95ca209e7d07189b885e5fdd9 238 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 189 6.1E-21 T 14-10-2018 VS_1579 61855cc95ca209e7d07189b885e5fdd9 238 Gene3D G3DSA:3.40.50.1000 6 226 2.9E-20 T 14-10-2018 IPR023214 HAD superfamily VS_1579 61855cc95ca209e7d07189b885e5fdd9 238 Gene3D G3DSA:1.10.150.240 18 93 2.9E-20 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VS_II0462 b77cd30a922bf5d202b143479d47339f 116 SUPERFAMILY SSF54593 5 116 1.31E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II0462 b77cd30a922bf5d202b143479d47339f 116 Gene3D G3DSA:3.10.180.10 1 116 2.7E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_II0462 b77cd30a922bf5d202b143479d47339f 116 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 110 3.2E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VS_2211 7182e891f90958e4b17f278bc51723d0 251 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 43 195 7.5E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VS_II0191 cec3a2f6d6742d33cd17c010a58f5343 131 PIRSF PIRSF028770 1 128 7.2E-69 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VS_II0191 cec3a2f6d6742d33cd17c010a58f5343 131 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 9.5E-41 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VS_II1129 7cec6f8846930e1740283752ee0034a6 403 SUPERFAMILY SSF56059 93 312 6.33E-31 T 14-10-2018 VS_II1129 7cec6f8846930e1740283752ee0034a6 403 Gene3D G3DSA:3.30.470.20 108 403 4.4E-35 T 14-10-2018 VS_II0777 874ec1dfc5541149ce2ea5614e546c00 259 Pfam PF06764 Protein of unknown function (DUF1223) 54 242 1.5E-46 T 14-10-2018 IPR010634 Protein of unknown function DUF1223 VS_II0777 874ec1dfc5541149ce2ea5614e546c00 259 SUPERFAMILY SSF52833 48 258 1.79E-54 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VS_1803 882a52566c6ce0fcd5702df68d539d9f 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 381 7.2E-18 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VS_2257 a9ebd416e1b3f75a8c8a8ecf03d9699e 168 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 7.9E-25 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VS_2257 a9ebd416e1b3f75a8c8a8ecf03d9699e 168 SUPERFAMILY SSF54637 10 156 1.53E-21 T 14-10-2018 IPR029069 HotDog domain superfamily VS_2257 a9ebd416e1b3f75a8c8a8ecf03d9699e 168 Gene3D G3DSA:3.10.129.10 14 156 8.4E-25 T 14-10-2018 VS_0907 3af993dfe1e29a3e1f7e37d6be0dfac9 163 Pfam PF02674 Colicin V production protein 4 142 5.4E-38 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VS_II0287 b7c6ecbdbc5fbcb1f43d715514e2bbab 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 135 5.2E-21 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VS_II0789 9e5b55d0b1399049bb731d5dbc096af4 90 Pfam PF01292 Prokaryotic cytochrome b561 32 87 3.0E-9 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VS_II0789 9e5b55d0b1399049bb731d5dbc096af4 90 SUPERFAMILY SSF81342 10 86 4.79E-12 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VS_1842 10588ea0917d8610170ef7c0c1739c80 1305 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1212 1302 1.1E-7 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VS_1842 10588ea0917d8610170ef7c0c1739c80 1305 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 306 411 4.8E-16 T 14-10-2018 IPR010221 VCBS repeat VS_1842 10588ea0917d8610170ef7c0c1739c80 1305 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 543 649 1.7E-16 T 14-10-2018 IPR010221 VCBS repeat VS_1842 10588ea0917d8610170ef7c0c1739c80 1305 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 781 873 4.6E-16 T 14-10-2018 IPR010221 VCBS repeat VS_1842 10588ea0917d8610170ef7c0c1739c80 1305 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 204 293 7.4E-16 T 14-10-2018 IPR010221 VCBS repeat VS_1842 10588ea0917d8610170ef7c0c1739c80 1305 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 662 768 1.9E-16 T 14-10-2018 IPR010221 VCBS repeat VS_1842 10588ea0917d8610170ef7c0c1739c80 1305 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 424 530 2.8E-15 T 14-10-2018 IPR010221 VCBS repeat VS_0679 9a3c389478024f668e856851dbce36c6 162 Pfam PF11012 Protein of unknown function (DUF2850) 75 153 1.4E-32 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 VS_1690 be89839a73804965481598192927ec66 528 PIRSF PIRSF006446 350 526 3.1E-33 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VS_1690 be89839a73804965481598192927ec66 528 PIRSF PIRSF006446 1 324 5.8E-115 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VS_1690 be89839a73804965481598192927ec66 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 7.3E-175 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VS_II1376 1e7a4363d80ad51a271dbc7688b07055 164 SUPERFAMILY SSF48452 6 91 9.87E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VS_0991 1c1c829a8a5bba506c251cf915373bf4 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.6E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VS_0991 1c1c829a8a5bba506c251cf915373bf4 306 SUPERFAMILY SSF161098 88 291 6.02E-21 T 14-10-2018 IPR035906 MetI-like superfamily VS_0991 1c1c829a8a5bba506c251cf915373bf4 306 Gene3D G3DSA:1.10.3720.10 84 300 8.1E-22 T 14-10-2018 IPR035906 MetI-like superfamily VS_II0865 0df4ef3af81cc2c7c9fd6ff8fa5559e5 158 Gene3D G3DSA:3.40.190.10 39 157 1.6E-5 T 14-10-2018 VS_II0865 0df4ef3af81cc2c7c9fd6ff8fa5559e5 158 SUPERFAMILY SSF53850 40 155 1.85E-8 T 14-10-2018 VS_1603 75cd876f32626a94480e504b10a6baa0 133 Pfam PF03692 Putative zinc- or iron-chelating domain 3 96 3.4E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VS_3027 5af88bb5db10330c749a47260dd12b72 220 Pfam PF07947 YhhN family 40 218 1.3E-33 T 14-10-2018 IPR012506 YhhN-like GO:0016021 VS_1045 fdf6b7cb63bb603caa5a0a45a75594d2 520 Pfam PF04293 SpoVR like protein 27 457 5.3E-176 T 14-10-2018 IPR007390 Sporulation stage V, protein R VS_II1124 4afef6f8f172007befa9fc11be6abb79 334 Gene3D G3DSA:1.10.3470.10 13 333 3.6E-96 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II1124 4afef6f8f172007befa9fc11be6abb79 334 Pfam PF01032 FecCD transport family 25 330 2.3E-94 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II1124 4afef6f8f172007befa9fc11be6abb79 334 SUPERFAMILY SSF81345 12 330 4.45E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_1760 fd0f71a9c14cb5f65c8519ce6f7e687c 321 SUPERFAMILY SSF53474 156 306 1.97E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_II1354 2ee5ca6aa95e3d7957f005d93b4c04f6 293 Pfam PF03547 Membrane transport protein 148 284 3.4E-10 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VS_1391 b7cfab09031ee9866277635cb9279df2 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.6E-33 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VS_0221 5fcf22ea1b8b4c8f11e7de8e196084d1 309 Pfam PF00535 Glycosyl transferase family 2 7 152 2.4E-29 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VS_0221 5fcf22ea1b8b4c8f11e7de8e196084d1 309 Gene3D G3DSA:3.90.550.10 5 191 2.6E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_0221 5fcf22ea1b8b4c8f11e7de8e196084d1 309 SUPERFAMILY SSF53448 6 217 2.53E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VS_II0540 832652b5f3f1f59f00c8d72261b06a40 469 SUPERFAMILY SSF141868 236 460 6.41E-43 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0540 832652b5f3f1f59f00c8d72261b06a40 469 SMART SM00052 215 464 1.9E-22 T 14-10-2018 IPR001633 EAL domain VS_II0540 832652b5f3f1f59f00c8d72261b06a40 469 Gene3D G3DSA:3.20.20.450 218 467 2.9E-45 T 14-10-2018 IPR035919 EAL domain superfamily VS_II0540 832652b5f3f1f59f00c8d72261b06a40 469 Pfam PF00563 EAL domain 225 459 1.9E-53 T 14-10-2018 IPR001633 EAL domain VS_1243 84ca5360eeee54c43bfc3435dcd37def 310 SUPERFAMILY SSF53613 1 302 2.49E-73 T 14-10-2018 IPR029056 Ribokinase-like VS_1243 84ca5360eeee54c43bfc3435dcd37def 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VS_1243 84ca5360eeee54c43bfc3435dcd37def 310 Pfam PF00294 pfkB family carbohydrate kinase 5 303 1.6E-60 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VS_1243 84ca5360eeee54c43bfc3435dcd37def 310 Gene3D G3DSA:3.40.1190.20 2 306 7.0E-81 T 14-10-2018 IPR029056 Ribokinase-like VS_II0503 83dd051539b782c11be2bfff0524ef45 664 Gene3D G3DSA:1.10.3470.10 349 664 7.0E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0503 83dd051539b782c11be2bfff0524ef45 664 Gene3D G3DSA:1.10.3470.10 5 337 7.7E-61 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0503 83dd051539b782c11be2bfff0524ef45 664 Pfam PF01032 FecCD transport family 41 332 6.4E-62 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II0503 83dd051539b782c11be2bfff0524ef45 664 Pfam PF01032 FecCD transport family 363 660 1.6E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VS_II0503 83dd051539b782c11be2bfff0524ef45 664 SUPERFAMILY SSF81345 356 660 3.01E-61 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_II0503 83dd051539b782c11be2bfff0524ef45 664 SUPERFAMILY SSF81345 8 332 1.18E-55 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VS_1645 b403f6d9a0e497410819ba68e59e1de4 625 Pfam PF09369 Domain of unknown function (DUF1998) 489 589 4.4E-10 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative VS_1657 0eb73be98c2178f3b83b25cc0501a1c6 146 Pfam PF10980 Protein of unknown function (DUF2787) 15 145 7.4E-50 T 14-10-2018 IPR021248 Protein of unknown function DUF2787 VS_1657 0eb73be98c2178f3b83b25cc0501a1c6 146 Gene3D G3DSA:3.10.450.430 1 146 1.8E-56 T 14-10-2018 VS_2673 f5ee464925a285aaff3c6c5afe14b0f5 166 SMART SM00731 12 161 4.3E-54 T 14-10-2018 IPR006640 SprT-like VS_2673 f5ee464925a285aaff3c6c5afe14b0f5 166 Pfam PF17283 SprT-like zinc ribbon domain 121 161 4.9E-12 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain VS_2673 f5ee464925a285aaff3c6c5afe14b0f5 166 Hamap MF_00746 Protein SprT [sprT]. 8 161 40.839 T 14-10-2018 IPR023483 Uncharacterised protein family SprT VS_2673 f5ee464925a285aaff3c6c5afe14b0f5 166 Pfam PF10263 SprT-like family 16 115 1.8E-18 T 14-10-2018 IPR006640 SprT-like VS_1556 bb11a2095b70d16ba55b331d05aaded3 161 Pfam PF02371 Transposase IS116/IS110/IS902 family 78 161 6.3E-22 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VS_II1080 bb2b66a86ed33a5ed070bed6d0c6834c 145 Pfam PF05232 Chlorhexidine efflux transporter 69 130 2.5E-23 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter VS_II1080 bb2b66a86ed33a5ed070bed6d0c6834c 145 Pfam PF05232 Chlorhexidine efflux transporter 1 63 2.9E-18 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter VS_II1095 f03544bb13da2b81251e488f3a9800e7 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 1.8E-46 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 VS_II0298 e98b9946e56e3ddd31dfee49a70a05e5 227 Pfam PF06912 Protein of unknown function (DUF1275) 16 211 4.8E-28 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 VS_II1478 6bcfa6d0275a9700e42b43b2d59043b8 402 Pfam PF07690 Major Facilitator Superfamily 19 228 4.0E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VS_II1478 6bcfa6d0275a9700e42b43b2d59043b8 402 SUPERFAMILY SSF103473 10 389 3.4E-59 T 14-10-2018 IPR036259 MFS transporter superfamily VS_II1478 6bcfa6d0275a9700e42b43b2d59043b8 402 Gene3D G3DSA:1.20.1250.20 12 386 1.4E-46 T 14-10-2018 VS_1058 16e4a4ec05a399ac4f42906321ff33f1 911 SMART SM01276 457 781 6.2E-40 T 14-10-2018 IPR031161 Peptidase family M60 domain VS_2145 f48641723c969cff137073b5faacb5c1 439 SUPERFAMILY SSF56112 98 322 3.88E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VS_2145 f48641723c969cff137073b5faacb5c1 439 Pfam PF03109 ABC1 family 115 230 4.0E-29 T 14-10-2018 IPR004147 UbiB domain VS_1173 78da5e461722acc644d16f41bcce333b 208 PIRSF PIRSF006324 1 207 3.3E-47 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_1173 78da5e461722acc644d16f41bcce333b 208 Pfam PF01810 LysE type translocator 15 205 3.7E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_2736 b02b70bdf17e2e9bb8fe0ac5201809fc 265 SUPERFAMILY SSF49785 2 154 5.1E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VS_2736 b02b70bdf17e2e9bb8fe0ac5201809fc 265 Gene3D G3DSA:2.60.120.260 25 155 8.4E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VS_2213 56aeda6f5def2f6cd38e67c2e2781784 138 PIRSF PIRSF003230 1 137 3.3E-35 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VS_2213 56aeda6f5def2f6cd38e67c2e2781784 138 Pfam PF03061 Thioesterase superfamily 23 104 6.7E-7 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VS_2213 56aeda6f5def2f6cd38e67c2e2781784 138 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 13 30 - T 14-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 VS_2213 56aeda6f5def2f6cd38e67c2e2781784 138 Gene3D G3DSA:3.10.129.10 2 134 4.2E-33 T 14-10-2018 VS_2213 56aeda6f5def2f6cd38e67c2e2781784 138 SUPERFAMILY SSF54637 4 132 1.1E-23 T 14-10-2018 IPR029069 HotDog domain superfamily VS_3015 f96bbd96db258ac5ba341270fb2755ab 135 Pfam PF03748 Flagellar basal body-associated protein FliL 33 135 2.5E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VS_II0335 a34d74eea37f6138ef5fa60b68183b24 329 Gene3D G3DSA:1.10.3430.10 23 328 5.3E-55 T 14-10-2018 IPR029020 Ammonium/urea transporter VS_II0335 a34d74eea37f6138ef5fa60b68183b24 329 Pfam PF03253 Urea transporter 40 320 2.4E-55 T 14-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 VS_2473 00b56a056d2a5c27e92000be34cc5850 337 Pfam PF01136 Peptidase family U32 75 336 1.9E-68 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VS_2473 00b56a056d2a5c27e92000be34cc5850 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VS_3046 602b9fa036cd40a9e91f55dcd11c71c8 232 Gene3D G3DSA:3.30.450.40 43 217 3.3E-32 T 14-10-2018 IPR029016 GAF-like domain superfamily VS_3046 602b9fa036cd40a9e91f55dcd11c71c8 232 Pfam PF04340 Protein of unknown function, DUF484 7 219 4.3E-63 T 14-10-2018 IPR007435 Protein of unknown function DUF484 VS_1367 422b304430652851b169871a7cb12680 590 Gene3D G3DSA:1.20.120.20 308 508 1.7E-7 T 14-10-2018 VS_0487 7ed7fcb763ee6b9cc409beedc92cc406 80 Pfam PF00665 Integrase core domain 7 68 1.9E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VS_0487 7ed7fcb763ee6b9cc409beedc92cc406 80 SUPERFAMILY SSF53098 13 68 8.34E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VS_II0685 e2d149193d07f4932bcdbc25b9aa3800 209 Pfam PF16357 Putative PepSY_TM-like 11 209 2.8E-58 T 14-10-2018 IPR032307 Putative PepSY TM-like protein VS_II0687 c930c5c458e6bd2d933ea04ea8cf724f 278 Pfam PF10670 Domain of unknown function (DUF4198) 26 253 8.3E-46 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 VS_II1216 d959fe1bfa4d2597d43ad6cdd2ae144b 239 Gene3D G3DSA:3.20.20.190 1 238 2.1E-67 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VS_II1216 d959fe1bfa4d2597d43ad6cdd2ae144b 239 SUPERFAMILY SSF51695 4 235 1.4E-62 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VS_II1216 d959fe1bfa4d2597d43ad6cdd2ae144b 239 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 233 8.4E-40 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VS_II0273 7d8446d32e55c520d3db6537ab54e249 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 8 23 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 VS_II0273 7d8446d32e55c520d3db6537ab54e249 52 Pfam PF01679 Proteolipid membrane potential modulator 4 49 1.6E-18 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 VS_II1021 37bb57a13a49518cd5ec71feb4c70b18 417 SUPERFAMILY SSF69304 141 321 6.15E-11 T 14-10-2018 VS_II0210 1a3c6b41fb9990c77250d3a94ceda1cf 563 Pfam PF13584 Oxygen tolerance 24 470 2.4E-71 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD VS_II0415 f4008fa0d9d1555e30bd68ef301b2ccd 292 Pfam PF02698 DUF218 domain 7 135 8.0E-14 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VS_3054 36d61f6bbd6f9b1b510ef394c6044b98 412 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 69 401 1.0E-99 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VS_1913 3a88950f1490a4f03781cdc9c9bd41e8 199 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 43 174 5.7E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VS_II0968 5ef936d49366f1836b05b5d4d2a6606d 440 Pfam PF13665 Domain of unknown function (DUF4150) 4 68 5.7E-18 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_1591 38f61f40a4ece27c936646e00354b951 281 Gene3D G3DSA:3.60.15.10 1 281 2.0E-78 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_1591 38f61f40a4ece27c936646e00354b951 281 Pfam PF00753 Metallo-beta-lactamase superfamily 28 81 2.5E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase VS_1591 38f61f40a4ece27c936646e00354b951 281 SUPERFAMILY SSF56281 14 280 8.91E-27 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VS_II0693 ef564754310f75b4c5dc36c7b2a03611 307 Gene3D G3DSA:3.40.50.1980 94 201 3.7E-5 T 14-10-2018 VS_II0693 ef564754310f75b4c5dc36c7b2a03611 307 SUPERFAMILY SSF53807 39 269 1.52E-15 T 14-10-2018 VS_II0159 b496b426ba357ff637b2bf5a6aaaff3b 293 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 71 201 2.7E-42 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VS_II0902 40bb5e73a9f8690814901c6631536010 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 46 523 1.1E-142 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VS_1109 512a23212050c4a757104ec620e7742c 538 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 17 511 2.5E-178 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VS_1109 512a23212050c4a757104ec620e7742c 538 PIRSF PIRSF006446 346 535 4.0E-33 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VS_1109 512a23212050c4a757104ec620e7742c 538 PIRSF PIRSF006446 10 341 6.7E-115 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VS_2397 6f700f5d0e8f4e16ae3a0083be4402af 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 9.5E-30 T 14-10-2018 IPR006696 Protein of unknown function DUF423 VS_0659 4ea2b47baf2f4aa34408bf73188b445b 520 Pfam PF03806 AbgT putative transporter family 20 518 1.8E-210 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VS_2672 96b11b287c8e5849b0848fc1d7a29df2 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 4.4E-26 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 VS_II0087 1d2579f872d15495cf48768da5343f9e 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 1.7E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VS_II0087 1d2579f872d15495cf48768da5343f9e 95 Gene3D G3DSA:3.30.2310.20 1 93 3.2E-15 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VS_II0125 e4c40c3344dab79c4a64b11987da1b5a 107 SUPERFAMILY SSF54909 7 89 9.08E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VS_II0125 e4c40c3344dab79c4a64b11987da1b5a 107 Gene3D G3DSA:3.30.70.100 1 96 2.7E-18 T 14-10-2018 VS_II0125 e4c40c3344dab79c4a64b11987da1b5a 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 84 3.8E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VS_1894 a90009dced251239bf08b5d2c75cc35e 82 Pfam PF10985 Protein of unknown function (DUF2805) 8 78 1.4E-35 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 VS_1894 a90009dced251239bf08b5d2c75cc35e 82 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 7 76 1.2E-35 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 VS_2297 a0f642bb187db4e2d20bfee732acd670 114 Pfam PF11169 Protein of unknown function (DUF2956) 9 113 2.3E-42 T 14-10-2018 IPR021339 Protein of unknown function DUF2956 VS_0314 192f4153893b6f1353459dc570e9baf0 509 Pfam PF00999 Sodium/hydrogen exchanger family 103 499 3.9E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VS_2426 2f510e67c69f1623c954dbd434dace5c 396 Pfam PF05940 NnrS protein 18 390 3.7E-105 T 14-10-2018 IPR010266 NnrS VS_II1413 adc723a7e53ad52c917af748dc328eac 154 Pfam PF11012 Protein of unknown function (DUF2850) 47 126 4.4E-30 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 VS_2884 1f2a25485cab9137a39740f8a0ccc1d1 82 Pfam PF12292 Protein of unknown function (DUF3624) 1 73 2.1E-34 T 14-10-2018 IPR022072 Protein of unknown function DUF3624 VS_0894 7056617c76e399f55be7a18c0082958e 176 Pfam PF04315 Elongation factor P hydroxylase 11 166 5.8E-72 T 14-10-2018 IPR007411 Elongation factor P hydroxylase VS_II0634 97a7f263608494bfc791214a4bb31e56 228 SUPERFAMILY SSF49354 18 125 3.92E-9 T 14-10-2018 IPR008962 PapD-like superfamily VS_II0634 97a7f263608494bfc791214a4bb31e56 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 134 1.6E-4 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 VS_2791 9ed8b9fbcdc0c64cd93d67bf422d26d5 195 Pfam PF09335 SNARE associated Golgi protein 38 153 8.8E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein VS_0783 10321d5872fe5db1550e73e0df915520 185 Pfam PF04279 Intracellular septation protein A 15 157 3.0E-8 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VS_1159 cd98698147b8ed4137128d4546a246dc 131 SUPERFAMILY SSF53850 11 128 3.8E-10 T 14-10-2018 VS_II1418 78562aadb7c6eb3ccfc9ab0e83927b67 318 Pfam PF03547 Membrane transport protein 165 307 2.4E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VS_2440 df9948806d74cd28c0082b1b755e9ccb 144 Pfam PF07811 TadE-like protein 12 54 9.0E-8 T 14-10-2018 IPR012495 TadE-like VS_1092 b143f24e4a0595a2a5a39f8321fa7e65 301 Pfam PF02698 DUF218 domain 113 275 1.7E-26 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VS_1864 410ea531c801f6cfda58cc3a974efbf6 73 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 4 64 3.3E-18 T 14-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system VS_1143 a64623130183b05069d134afa3da9b7f 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 6.7E-18 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VS_1916 cc9ce05702131e2c031915b09b1ce2ad 266 Pfam PF11201 Protein of unknown function (DUF2982) 67 259 8.3E-48 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 VS_2365 7b6a8d1032a4aba4e6c94fd455fed4a5 556 Pfam PF03806 AbgT putative transporter family 47 554 2.2E-226 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VS_II1074 2163325788fa4726b9e3a5f0668e569d 366 Pfam PF01594 AI-2E family transporter 19 345 7.5E-37 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VS_0120 cfaa092d8ff3d53c2e6170b3d38d3efc 189 Pfam PF13511 Domain of unknown function (DUF4124) 10 57 1.3E-9 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 VS_II0469 00895480b38bbfb2aa9a19ec26225965 72 Pfam PF04964 Flp/Fap pilin component 17 62 1.7E-10 T 14-10-2018 IPR007047 Flp/Fap pilin component VS_II0666 bab0d4af85f9120b1c45c50fdb526f79 164 Pfam PF01548 Transposase 41 121 4.7E-7 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 VS_2774 cbeab69250d5679fe664e7ee54accbfe 1252 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 919 1251 2.6E-62 T 14-10-2018 IPR007452 Translocation and assembly module TamB VS_0935 b4e94783b3a55854ef4aeb9e1382c8d4 93 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 5.3E-30 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 VS_1490 3c9c4b2d84c54ab12148014ef735103c 154 Pfam PF11749 Protein of unknown function (DUF3305) 58 144 1.8E-19 T 14-10-2018 IPR021736 Protein of unknown function DUF3305 VS_0115 e3e38579e7d5b5370c33d90387e0c754 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 3.1E-43 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 VS_2298 bf8c75cfc4174d58ad4e5c39e1a9ad6c 110 Pfam PF13698 Domain of unknown function (DUF4156) 26 109 2.7E-19 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 VS_II1159 229e744707344c047c08c5f3091894f1 134 Pfam PF03479 Domain of unknown function (DUF296) 3 108 6.7E-22 T 14-10-2018 IPR005175 PPC domain VS_II1159 229e744707344c047c08c5f3091894f1 134 Gene3D G3DSA:3.30.1330.80 2 134 1.3E-44 T 14-10-2018 VS_II1159 229e744707344c047c08c5f3091894f1 134 SUPERFAMILY SSF117856 3 131 2.62E-35 T 14-10-2018 VS_1651 70f83c8863427738d1b2ed34ea4247d4 375 Pfam PF13391 HNH endonuclease 277 329 1.4E-6 T 14-10-2018 IPR003615 HNH nuclease VS_0062 07945fa15293b575898414354c607e94 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.4E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity VS_1714 66ae9927fe64230f34523b2f3618e962 81 Pfam PF03788 LrgA family 1 72 2.8E-16 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 VS_0543 d7b22d7c1d6e1bba9e78bfffca3c3759 116 Pfam PF10973 Protein of unknown function (DUF2799) 29 109 1.4E-22 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VS_3049 1ce36770a7229885e57a17c34eb74538 78 Pfam PF13627 Prokaryotic lipoprotein-attachment site 46 68 9.1E-9 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site VS_2070 4b9ea3478d496399a88395c922b97c22 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 7 253 9.3E-64 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VS_0467 318fcc259b2b3fd7f0d9bbd1243365c6 317 Pfam PF03186 CobD/Cbib protein 19 283 1.2E-33 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VS_1249 72abc992ae02543088052baf14747b49 455 Pfam PF01554 MatE 246 405 1.0E-7 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_1249 72abc992ae02543088052baf14747b49 455 Pfam PF01554 MatE 19 178 9.8E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VS_2276 3c9ad444cbf2334952e1d73dff20d2be 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 4.5E-70 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 VS_2439 27797de79d1606adce9f181d76d24ee9 164 Pfam PF07811 TadE-like protein 11 53 3.3E-8 T 14-10-2018 IPR012495 TadE-like VS_II1428 1e91e3cb9df3eab529cebb3817509d01 479 Pfam PF03600 Citrate transporter 49 424 1.6E-53 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VS_1617 f0041e6eb23956e05c49e92f2b9b6227 377 Pfam PF14284 PcfJ-like protein 242 361 6.4E-11 T 14-10-2018 IPR025586 PcfJ-like protein VS_3025 37b05f17f1cc90fdfa00e28c05b58116 209 Pfam PF01914 MarC family integral membrane protein 17 207 5.2E-54 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VS_0420 72cffabb121938151d7faba66c9e7084 146 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.2E-38 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 VS_II0475 96796e09f2cd4d2136ee92e816719446 304 Pfam PF00482 Type II secretion system (T2SS), protein F 137 261 2.1E-16 T 14-10-2018 IPR018076 Type II secretion system F domain VS_2374 7b8113187ba3651b54272457cae72057 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 1.4E-34 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VS_II0297 7afb513c7ae419718d68db33d3d63ff4 456 Pfam PF07670 Nucleoside recognition 142 235 6.0E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VS_1214 96561c7f78951191656c2edac4aa27f1 248 Pfam PF12119 Protein of unknown function (DUF3581) 8 223 3.3E-98 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 VS_2229 80738085830003e2279773a5aa63c9f0 198 Gene3D G3DSA:3.10.180.10 3 198 7.7E-64 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2229 80738085830003e2279773a5aa63c9f0 198 SUPERFAMILY SSF54593 3 197 3.04E-66 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VS_2229 80738085830003e2279773a5aa63c9f0 198 Pfam PF06185 YecM protein 12 196 1.5E-69 T 14-10-2018 IPR010393 Protein of unknown function DUF991 VS_0492 ba970803cdfaa0748bfab71c4c4f2446 670 Pfam PF01757 Acyltransferase family 6 339 1.4E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VS_2251 8a555eceb2176ec5052b044f47fc02f1 252 Pfam PF08907 Domain of unknown function (DUF1853) 37 214 3.5E-33 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 VS_2856 ad797c650ecc88da1a2af1712294f337 133 SUPERFAMILY SSF46689 9 109 3.23E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VS_II1192 5fe31ccb40944aa5a0981c0105d1c1da 176 Pfam PF06042 Nucleotidyltransferase 6 162 3.7E-65 T 14-10-2018 IPR009267 Putative nucleotidyltransferase VS_1998 43d3cafb5d890142511ea12df38e83ab 259 Pfam PF11150 Protein of unknown function (DUF2927) 31 230 2.9E-63 T 14-10-2018 IPR021323 Protein of unknown function DUF2927 VS_2150 0c561edcd397c2c21adf45b0bc42df36 481 Pfam PF01943 Polysaccharide biosynthesis protein 7 271 2.0E-15 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VS_II0983 7018768f8272526428faf5b359973131 263 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 65 126 3.0E-9 T 14-10-2018 IPR032871 AHH domain-containing protein VS_II0958 f430c7c74d26f44061adaeec60e6f544 593 Pfam PF13665 Domain of unknown function (DUF4150) 4 68 3.9E-16 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 VS_1509 f368d6ed72f6fd35752baed2c4255a9a 267 Pfam PF04116 Fatty acid hydroxylase superfamily 87 224 1.0E-25 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VS_0655 f961b033545dbf5fc117804543af9238 210 PIRSF PIRSF004525 12 187 1.3E-7 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VS_1567 9bcfc605c5f1e92140c1ca968e026471 751 Pfam PF01136 Peptidase family U32 530 664 4.2E-6 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VS_1567 9bcfc605c5f1e92140c1ca968e026471 751 Pfam PF01136 Peptidase family U32 76 292 9.0E-68 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VS_II0993 ad278575482f3041454b8f25a5c25aee 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 326 2.5E-94 T 14-10-2018 IPR010732 Type VI secretion, TssG-like VS_II0993 ad278575482f3041454b8f25a5c25aee 341 Pfam PF06996 Type VI secretion, TssG 21 326 8.3E-84 T 14-10-2018 IPR010732 Type VI secretion, TssG-like VS_0027 25a69d4ab965029bafe1cc42f5f5c172 192 Pfam PF16964 Putative tight adherence pilin protein F 15 192 5.1E-67 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F VS_II0371 25783ad881b3a406d517a6b18559c9cc 340 Pfam PF02628 Cytochrome oxidase assembly protein 4 312 2.9E-84 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 VS_0503 0a49bb9800c41d86ea047dfccb155aa1 64 Pfam PF12065 Protein of unknown function (DUF3545) 3 63 1.3E-24 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 VS_II0088 f03774d821ede5a594aecccb8aaa737c 245 SUPERFAMILY SSF55681 15 244 9.94E-46 T 14-10-2018 VS_II0088 f03774d821ede5a594aecccb8aaa737c 245 Gene3D G3DSA:3.30.930.10 13 245 1.4E-45 T 14-10-2018 VS_2143 99e29fd32f418948c411d96b3c5d4781 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 4.6E-25 T 14-10-2018 IPR007263 Protein of unknown function DUF393 VS_0162 d4ce7990acfc099906fb1c92539d4bf2 456 Pfam PF00860 Permease family 32 410 1.9E-19 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VS_1221 310bd78e4517b64bfb4fcb44f1a99fde 247 Pfam PF07070 SpoOM protein 2 215 5.7E-59 T 14-10-2018 IPR009776 Sporulation stage 0, protein M VS_II0028 2d215ad56612e49fdcd1ddf8e8e0d952 210 SUPERFAMILY SSF53474 3 188 2.96E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VS_2726 b35996116cb91f748e907c1ea627dd7d 158 Pfam PF06271 RDD family 9 148 7.0E-22 T 14-10-2018 IPR010432 RDD VS_1201 f418d8438470ea25fb8036564cb22eaa 296 Pfam PF02698 DUF218 domain 82 219 5.6E-19 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VS_2563 26616256e0ce2935498659c1fa243abb 217 Gene3D G3DSA:1.10.530.10 55 214 3.1E-13 T 14-10-2018 VS_2563 26616256e0ce2935498659c1fa243abb 217 SUPERFAMILY SSF53955 31 175 2.63E-21 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VS_1585 be4c2e927b8dbd038ccfcbe253b4c9e0 204 Pfam PF01810 LysE type translocator 17 203 3.2E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VS_1532 792e6e818a8284fc7f30ea562ecbba9c 474 Pfam PF02706 Chain length determinant protein 8 95 9.4E-6 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VS_2876 f7bcc7071268939e7574b5ac684462f1 213 Pfam PF05137 Fimbrial assembly protein (PilN) 112 185 4.4E-12 T 14-10-2018 IPR007813 Fimbrial assembly PilN VS_1740 dd20d462b9a434f743aca4731acc747f 65 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 1.5E-20 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VS_II0840 bd750b7195766346187171d338259766 266 Gene3D G3DSA:3.30.460.10 18 137 3.5E-20 T 14-10-2018 VS_1451 8fa640f952eb3bf11e90e2eb73722986 216 Pfam PF05144 Phage replication protein CRI 69 203 2.6E-5 T 14-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 VS_1548 59c3441b4762bb8f4c4dfd525fe579a5 175 Pfam PF11066 Protein of unknown function (DUF2867) 24 167 1.0E-35 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 VS_1008 9d48c410faefdf3596116c937a51035c 159 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 8.1E-21 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 VS_1008 9d48c410faefdf3596116c937a51035c 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 3.6E-20 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 VS_II0633 c9b0628ccb308d2dc54a03cc96fc1613 830 Pfam PF00577 Outer membrane usher protein 185 725 9.9E-20 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 VS_II0680 079a950e432e1dce2672a282c62ea667 186 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 179 9.9E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VS_1266 16535414d299eb0dd17265ae599d9901 403 Pfam PF11301 Protein of unknown function (DUF3103) 41 402 1.6E-174 T 14-10-2018 IPR021452 Protein of unknown function DUF3103 VS_II1220 26d8e426ab0dd5fcb92de1c1e3ee7bf1 262 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 6 185 4.0E-29 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 VS_0530 164d936e284dc7f1ea7247fa1ff2a5d2 406 Pfam PF02690 Na+/Pi-cotransporter 54 172 2.7E-22 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VS_0530 164d936e284dc7f1ea7247fa1ff2a5d2 406 Pfam PF02690 Na+/Pi-cotransporter 242 353 8.8E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VS_1757 002f72a5738fe81a2b9aeaf9153882f4 261 Pfam PF13988 Protein of unknown function (DUF4225) 80 234 4.3E-23 T 14-10-2018 IPR025320 Protein of unknown function DUF4225 VS_1711 2a7aa8e6c681c7c3eefe2321b386fe18 337 Pfam PF10974 Protein of unknown function (DUF2804) 15 336 3.9E-91 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 VS_1434 cb413f38d56e0dd096bb831eb6fed016 213 Pfam PF11185 Protein of unknown function (DUF2971) 77 149 3.0E-8 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 VS_1755 79b6f3fc5065301abd4a1fd7bd52584d 502 Pfam PF11840 Protein of unknown function (DUF3360) 16 498 8.5E-272 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 VS_0190 c291574493e8f7fef4263822dd3513af 246 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 1 117 1.1E-13 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 VS_0125 f56aa55b5d7f65c209d0ff1e481cef9d 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 2.4E-89 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 VS_1311 9c5abc90ce3f2cbfcf91c2e7a78d5af0 506 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 8.3E-140 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VS_1742 ce3eb1b254684dc41151b7aeb86beefc 167 Pfam PF14317 YcxB-like protein 102 153 1.3E-6 T 14-10-2018 IPR025588 YcxB-like protein VS_II0145 0d56c3648c772a793811cb02e4b033ed 162 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 148 1.7E-25 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VS_1222 dcb3c05b5bf313e85ba6c102d3934728 124 SUPERFAMILY SSF56349 41 104 1.47E-8 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VS_1334 cf802f766153a2c035c84a04df064049 498 Pfam PF06812 ImpA, N-terminal, type VI secretion system 20 166 4.7E-23 T 14-10-2018 IPR010657 ImpA, N-terminal