locus-tag class description IX91_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IX91_00010 PF02767 DNA polymerase III beta subunit, central domain IX91_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IX91_00015 PF02463 RecF/RecN/SMC N terminal domain IX91_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IX91_00020 PF18053 DNA gyrase B subunit insert domain IX91_00020 PF01751 Toprim domain IX91_00020 PF00204 DNA gyrase B IX91_00025 PF00011 Hsp20/alpha crystallin family IX91_00035 PF00155 Aminotransferase class I and II IX91_00040 PF02092 Glycyl-tRNA synthetase beta subunit IX91_00040 PF05746 DALR anticodon binding domain IX91_00050 PF01169 Uncharacterized protein family UPF0016 IX91_00060 PF01206 Sulfurtransferase TusA IX91_00075 PF03466 LysR substrate binding domain IX91_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_00080 PF08240 Alcohol dehydrogenase GroES-like domain IX91_00080 PF00107 Zinc-binding dehydrogenase IX91_00085 PF00291 Pyridoxal-phosphate dependent enzyme IX91_00085 PF00585 C-terminal regulatory domain of Threonine dehydratase IX91_00090 PF00920 Dehydratase family IX91_00095 PF01063 Amino-transferase class IV IX91_00105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX91_00105 PF00205 Thiamine pyrophosphate enzyme, central domain IX91_00105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX91_00110 PF13335 Magnesium chelatase, subunit ChlI C-terminal IX91_00110 PF01078 Magnesium chelatase, subunit ChlI IX91_00120 PF01553 Acyltransferase IX91_00125 PF01323 DSBA-like thioredoxin domain IX91_00130 PF01636 Phosphotransferase enzyme family IX91_00135 PF13746 4Fe-4S dicluster domain IX91_00135 PF12801 4Fe-4S binding domain IX91_00135 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IX91_00140 PF06288 Protein of unknown function (DUF1040) IX91_00150 PF07070 SpoOM protein IX91_00155 PF03006 Haemolysin-III related IX91_00160 PF02386 Cation transport protein IX91_00165 PF02254 TrkA-N domain IX91_00165 PF02080 TrkA-C domain IX91_00170 PF01189 16S rRNA methyltransferase RsmB/F IX91_00170 PF01029 NusB family IX91_00175 PF02911 Formyl transferase, C-terminal domain IX91_00175 PF00551 Formyl transferase IX91_00180 PF01327 Polypeptide deformylase IX91_00185 PF01476 LysM domain IX91_00190 PF02481 DNA recombination-mediator protein A IX91_00190 PF17782 DprA winged helix domain IX91_00195 PF04361 Protein of unknown function (DUF494) IX91_00200 PF01396 Topoisomerase DNA binding C4 zinc finger IX91_00205 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IX91_00205 PF02222 ATP-grasp domain IX91_00210 PF00731 AIR carboxylase IX91_00215 PF01300 Telomere recombination IX91_00220 PF01218 Coproporphyrinogen III oxidase IX91_00225 PF08501 Shikimate dehydrogenase substrate binding domain IX91_00225 PF01488 Shikimate / quinate 5-dehydrogenase IX91_00225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IX91_00230 PF07369 Protein of unknown function (DUF1488) IX91_00235 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_00285 PF00990 Diguanylate cyclase, GGDEF domain IX91_00285 PF00563 EAL domain IX91_00285 PF03707 Bacterial signalling protein N terminal repeat IX91_00285 PF13188 PAS domain IX91_00290 PF02954 Bacterial regulatory protein, Fis family IX91_00290 PF00072 Response regulator receiver domain IX91_00290 PF00158 Sigma-54 interaction domain IX91_00295 PF00989 PAS fold IX91_00295 PF00512 His Kinase A (phospho-acceptor) domain IX91_00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_00305 PF03951 Glutamine synthetase, beta-Grasp domain IX91_00305 PF00120 Glutamine synthetase, catalytic domain IX91_00335 PF00583 Acetyltransferase (GNAT) family IX91_00335 PF09500 Putative thioesterase (yiiD_Cterm) IX91_00345 PF01293 Phosphoenolpyruvate carboxykinase IX91_00350 PF01430 Hsp33 protein IX91_00355 PF01479 S4 domain IX91_00360 PF11356 Type II secretion system protein C IX91_00365 PF03958 Bacterial type II/III secretion system short domain IX91_00365 PF00263 Bacterial type II and III secretion system protein IX91_00370 PF00437 Type II/IV secretion system protein IX91_00375 PF00482 Type II secretion system (T2SS), protein F IX91_00380 PF07963 Prokaryotic N-terminal methylation motif IX91_00380 PF08334 Type II secretion system (T2SS), protein G IX91_00385 PF12019 Type II transport protein GspH IX91_00390 PF02501 Type II secretion system (T2SS), protein I IX91_00390 PF07963 Prokaryotic N-terminal methylation motif IX91_00395 PF11612 Type II secretion system (T2SS), protein J IX91_00395 PF07963 Prokaryotic N-terminal methylation motif IX91_00400 PF03934 Type II secretion system (T2SS), protein K IX91_00405 PF12693 GspL periplasmic domain IX91_00405 PF05134 Type II secretion system (T2SS), protein L IX91_00410 PF04612 Type II secretion system (T2SS), protein M IX91_00420 PF00672 HAMP domain IX91_00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_00420 PF00512 His Kinase A (phospho-acceptor) domain IX91_00425 PF00072 Response regulator receiver domain IX91_00425 PF00486 Transcriptional regulatory protein, C terminal IX91_00430 PF03449 Transcription elongation factor, N-terminal IX91_00430 PF01272 Transcription elongation factor, GreA/GreB, C-term IX91_00440 PF00575 S1 RNA binding domain IX91_00440 PF09371 Tex-like protein N-terminal domain IX91_00440 PF16921 Tex protein YqgF-like domain IX91_00440 PF17674 HHH domain IX91_00450 PF00561 alpha/beta hydrolase fold IX91_00455 PF00156 Phosphoribosyl transferase domain IX91_00460 PF01521 Iron-sulphur cluster biosynthesis IX91_00460 PF01106 NifU-like domain IX91_00465 PF00293 NUDIX domain IX91_00470 PF00459 Inositol monophosphatase family IX91_00475 PF00270 DEAD/DEAH box helicase IX91_00475 PF00271 Helicase conserved C-terminal domain IX91_00475 PF17191 RecG wedge domain IX91_00480 PF12105 SpoU, rRNA methylase, C-terminal IX91_00480 PF00588 SpoU rRNA Methylase family IX91_00485 PF13291 ACT domain IX91_00485 PF04607 Region found in RelA / SpoT proteins IX91_00485 PF02824 TGS domain IX91_00490 PF01192 RNA polymerase Rpb6 IX91_00495 PF00625 Guanylate kinase IX91_00500 PF00860 Permease family IX91_00520 PF03755 YicC-like family, N-terminal region IX91_00520 PF08340 Domain of unknown function (DUF1732) IX91_00525 PF01138 3' exoribonuclease family, domain 1 IX91_00525 PF03725 3' exoribonuclease family, domain 2 IX91_00535 PF03279 Bacterial lipid A biosynthesis acyltransferase IX91_00540 PF03279 Bacterial lipid A biosynthesis acyltransferase IX91_00545 PF00440 Bacterial regulatory proteins, tetR family IX91_00550 PF04127 DNA / pantothenate metabolism flavoprotein IX91_00550 PF02441 Flavoprotein IX91_00560 PF04002 RadC-like JAB domain IX91_00570 PF00471 Ribosomal protein L33 IX91_00580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IX91_00580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IX91_00580 PF06827 Zinc finger found in FPG and IleRS IX91_00585 PF01467 Cytidylyltransferase-like IX91_00590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IX91_00595 PF00535 Glycosyl transferase family 2 IX91_00600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IX91_00620 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IX91_00625 PF04488 Glycosyltransferase sugar-binding region containing DXD motif IX91_00630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IX91_00645 PF01370 NAD dependent epimerase/dehydratase family IX91_00650 PF16363 GDP-mannose 4,6 dehydratase IX91_00655 PF00483 Nucleotidyl transferase IX91_00660 PF04321 RmlD substrate binding domain IX91_00665 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IX91_00680 PF08889 WbqC-like protein family IX91_00685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IX91_00685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IX91_00685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IX91_00690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX91_00690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX91_00710 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IX91_00710 PF14602 Hexapeptide repeat of succinyl-transferase IX91_00710 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_00715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IX91_00730 PF00535 Glycosyl transferase family 2 IX91_00740 PF01370 NAD dependent epimerase/dehydratase family IX91_00750 PF01370 NAD dependent epimerase/dehydratase family IX91_00755 PF02397 Bacterial sugar transferase IX91_00770 PF02719 Polysaccharide biosynthesis protein IX91_00780 PF00535 Glycosyl transferase family 2 IX91_00805 PF13091 PLD-like domain IX91_00810 PF03099 Biotin/lipoate A/B protein ligase family IX91_00810 PF02237 Biotin protein ligase C terminal domain IX91_00810 PF08279 HTH domain IX91_00815 PF01565 FAD binding domain IX91_00815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IX91_00840 PF00166 Chaperonin 10 Kd subunit IX91_00845 PF00118 TCP-1/cpn60 chaperonin family IX91_00850 PF03167 Uracil DNA glycosylase superfamily IX91_00855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX91_00860 PF04222 Protein of unknown function (DUF416) IX91_00865 PF01595 Cyclin M transmembrane N-terminal domain IX91_00865 PF00571 CBS domain IX91_00870 PF00216 Bacterial DNA-binding protein IX91_00880 PF02844 Phosphoribosylglycinamide synthetase, N domain IX91_00880 PF02843 Phosphoribosylglycinamide synthetase, C domain IX91_00880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IX91_00890 PF13411 MerR HTH family regulatory protein IX91_00895 PF05230 MASE2 domain IX91_00895 PF00990 Diguanylate cyclase, GGDEF domain IX91_00900 PF02954 Bacterial regulatory protein, Fis family IX91_00905 PF01207 Dihydrouridine synthase (Dus) IX91_00915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX91_00915 PF02785 Biotin carboxylase C-terminal domain IX91_00915 PF00289 Biotin carboxylase, N-terminal domain IX91_00920 PF00364 Biotin-requiring enzyme IX91_00925 PF01220 Dehydroquinase class II IX91_00930 PF00501 AMP-binding enzyme IX91_00930 PF13193 AMP-binding enzyme C-terminal domain IX91_00930 PF16177 Acetyl-coenzyme A synthetase N-terminus IX91_00945 PF12832 MFS_1 like family IX91_00950 PF00989 PAS fold IX91_00950 PF00512 His Kinase A (phospho-acceptor) domain IX91_00950 PF01627 Hpt domain IX91_00950 PF00072 Response regulator receiver domain IX91_00950 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_00960 PF00474 Sodium:solute symporter family IX91_00970 PF01914 MarC family integral membrane protein IX91_00975 PF00072 Response regulator receiver domain IX91_00975 PF00196 Bacterial regulatory proteins, luxR family IX91_00980 PF02683 Cytochrome C biogenesis protein transmembrane region IX91_00980 PF11412 Disulphide bond corrector protein DsbC IX91_00985 PF01316 Arginine repressor, DNA binding domain IX91_00985 PF02863 Arginine repressor, C-terminal domain IX91_00990 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IX91_00990 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IX91_00995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX91_00995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX91_01000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX91_01000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX91_01005 PF00696 Amino acid kinase family IX91_01015 PF03606 C4-dicarboxylate anaerobic carrier IX91_01020 PF03605 Anaerobic c4-dicarboxylate membrane transporter IX91_01025 PF00206 Lyase IX91_01025 PF10415 Fumarase C C-terminus IX91_01065 PF00117 Glutamine amidotransferase class-I IX91_01070 PF00202 Aminotransferase class-III IX91_01075 PF04958 Arginine N-succinyltransferase beta subunit IX91_01080 PF00171 Aldehyde dehydrogenase family IX91_01090 PF00027 Cyclic nucleotide-binding domain IX91_01090 PF13545 Crp-like helix-turn-helix domain IX91_01095 PF00485 Phosphoribulokinase / Uridine kinase family IX91_01100 PF06794 Uncharacterised protein family (UPF0270) IX91_01105 PF00561 alpha/beta hydrolase fold IX91_01115 PF00005 ABC transporter IX91_01115 PF12848 ABC transporter IX91_01120 PF02525 Flavodoxin-like fold IX91_01125 PF00999 Sodium/hydrogen exchanger family IX91_01125 PF02254 TrkA-N domain IX91_01130 PF09526 Probable metal-binding protein (DUF2387) IX91_01135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX91_01140 PF01112 Asparaginase IX91_01145 PF00709 Adenylosuccinate synthetase IX91_01150 PF08238 Sel1 repeat IX91_01155 PF01979 Amidohydrolase family IX91_01160 PF17876 Cold shock domain IX91_01160 PF08206 Ribonuclease B OB domain IX91_01160 PF00773 RNB domain IX91_01160 PF08461 Ribonuclease R winged-helix domain IX91_01160 PF00575 S1 RNA binding domain IX91_01165 PF08032 RNA 2'-O ribose methyltransferase substrate binding IX91_01165 PF00588 SpoU rRNA Methylase family IX91_01170 PF00338 Ribosomal protein S10p/S20e IX91_01175 PF00297 Ribosomal protein L3 IX91_01180 PF00573 Ribosomal protein L4/L1 family IX91_01185 PF00276 Ribosomal protein L23 IX91_01190 PF03947 Ribosomal Proteins L2, C-terminal domain IX91_01190 PF00181 Ribosomal Proteins L2, RNA binding domain IX91_01195 PF00203 Ribosomal protein S19 IX91_01200 PF00237 Ribosomal protein L22p/L17e IX91_01205 PF07650 KH domain IX91_01205 PF00189 Ribosomal protein S3, C-terminal domain IX91_01210 PF00252 Ribosomal protein L16p/L10e IX91_01215 PF00831 Ribosomal L29 protein IX91_01220 PF00366 Ribosomal protein S17 IX91_01225 PF00238 Ribosomal protein L14p/L23e IX91_01230 PF00467 KOW motif IX91_01230 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IX91_01235 PF00673 ribosomal L5P family C-terminus IX91_01235 PF00281 Ribosomal protein L5 IX91_01240 PF00253 Ribosomal protein S14p/S29e IX91_01245 PF00410 Ribosomal protein S8 IX91_01250 PF00347 Ribosomal protein L6 IX91_01255 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IX91_01260 PF00333 Ribosomal protein S5, N-terminal domain IX91_01260 PF03719 Ribosomal protein S5, C-terminal domain IX91_01265 PF00327 Ribosomal protein L30p/L7e IX91_01275 PF00344 SecY translocase IX91_01280 PF00444 Ribosomal protein L36 IX91_01285 PF00416 Ribosomal protein S13/S18 IX91_01290 PF00411 Ribosomal protein S11 IX91_01295 PF01479 S4 domain IX91_01295 PF00163 Ribosomal protein S4/S9 N-terminal domain IX91_01305 PF01196 Ribosomal protein L17 IX91_01315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX91_01315 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX91_01330 PF13673 Acetyltransferase (GNAT) domain IX91_01335 PF13545 Crp-like helix-turn-helix domain IX91_01335 PF00027 Cyclic nucleotide-binding domain IX91_01340 PF00149 Calcineurin-like phosphoesterase IX91_01340 PF02872 5'-nucleotidase, C-terminal domain IX91_01345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX91_01345 PF14824 Sirohaem biosynthesis protein central IX91_01345 PF10414 Sirohaem synthase dimerisation region IX91_01350 PF01507 Phosphoadenosine phosphosulfate reductase family IX91_01355 PF00009 Elongation factor Tu GTP binding domain IX91_01360 PF03600 Citrate transporter IX91_01360 PF02080 TrkA-C domain IX91_01375 PF01475 Ferric uptake regulator family IX91_01380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX91_01380 PF00672 HAMP domain IX91_01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_01380 PF00512 His Kinase A (phospho-acceptor) domain IX91_01380 PF01627 Hpt domain IX91_01380 PF00072 Response regulator receiver domain IX91_01385 PF00072 Response regulator receiver domain IX91_01450 PF01207 Dihydrouridine synthase (Dus) IX91_01470 PF00258 Flavodoxin IX91_01470 PF00175 Oxidoreductase NAD-binding domain IX91_01470 PF00667 FAD binding domain IX91_01475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX91_01475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX91_01535 PF00999 Sodium/hydrogen exchanger family IX91_01540 PF00809 Pterin binding enzyme IX91_01540 PF02574 Homocysteine S-methyltransferase IX91_01540 PF02965 Vitamin B12 dependent methionine synthase, activation domain IX91_01540 PF02310 B12 binding domain IX91_01540 PF02607 B12 binding domain IX91_01545 PF01769 Divalent cation transporter IX91_01545 PF03448 MgtE intracellular N domain IX91_01545 PF00571 CBS domain IX91_01550 PF00381 PTS HPr component phosphorylation site IX91_01555 PF03668 P-loop ATPase protein family IX91_01560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_01565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IX91_01570 PF04552 Sigma-54, DNA binding domain IX91_01570 PF04963 Sigma-54 factor, core binding domain IX91_01570 PF00309 Sigma-54 factor, Activator interacting domain (AID) IX91_01575 PF12399 Branched-chain amino acid ATP-binding cassette transporter IX91_01575 PF00005 ABC transporter IX91_01580 PF03968 OstA-like protein IX91_01595 PF01380 SIS domain IX91_01595 PF00571 CBS domain IX91_01600 PF01699 Sodium/calcium exchanger protein IX91_01605 PF00005 ABC transporter IX91_01610 PF02405 Permease MlaE IX91_01615 PF02470 MlaD protein IX91_01620 PF05494 MlaC protein IX91_01625 PF13466 STAS domain IX91_01630 PF01722 BolA-like protein IX91_01635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IX91_01640 PF01553 Acyltransferase IX91_01680 PF00672 HAMP domain IX91_01680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_01680 PF17200 Single Cache domain 2 IX91_01710 PF01464 Transglycosylase SLT domain IX91_01710 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IX91_01715 PF04362 Bacterial Fe(2+) trafficking IX91_01720 PF00730 HhH-GPD superfamily base excision DNA repair protein IX91_01720 PF00633 Helix-hairpin-helix motif IX91_01720 PF14815 NUDIX domain IX91_01720 PF10576 Iron-sulfur binding domain of endonuclease III IX91_01725 PF02390 Putative methyltransferase IX91_01730 PF04960 Glutaminase IX91_01735 PF06969 HemN C-terminal domain IX91_01735 PF04055 Radical SAM superfamily IX91_01740 PF01725 Ham1 family IX91_01750 PF02594 Uncharacterised ACR, YggU family COG1872 IX91_01755 PF02325 YGGT family IX91_01760 PF03807 NADP oxidoreductase coenzyme F420-dependent IX91_01760 PF14748 Pyrroline-5-carboxylate reductase dimerisation IX91_01765 PF01168 Alanine racemase, N-terminal domain IX91_01770 PF00437 Type II/IV secretion system protein IX91_01775 PF00437 Type II/IV secretion system protein IX91_01785 PF17910 FeoB cytosolic helical domain IX91_01785 PF04023 FeoA domain IX91_01785 PF07670 Nucleoside recognition IX91_01785 PF02421 Ferrous iron transport protein B IX91_01785 PF07664 Ferrous iron transport protein B C terminus IX91_01805 PF03652 Holliday junction resolvase IX91_01810 PF02622 Uncharacterized ACR, COG1678 IX91_01815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IX91_01815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IX91_01820 PF04452 RNA methyltransferase IX91_01825 PF04231 Endonuclease I IX91_01830 PF10263 SprT-like family IX91_01830 PF17283 SprT-like zinc ribbon domain IX91_01840 PF02772 S-adenosylmethionine synthetase, central domain IX91_01840 PF00438 S-adenosylmethionine synthetase, N-terminal domain IX91_01840 PF02773 S-adenosylmethionine synthetase, C-terminal domain IX91_01845 PF02780 Transketolase, C-terminal domain IX91_01845 PF02779 Transketolase, pyrimidine binding domain IX91_01845 PF00456 Transketolase, thiamine diphosphate binding domain IX91_01855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX91_01855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX91_01860 PF00162 Phosphoglycerate kinase IX91_01865 PF01116 Fructose-bisphosphate aldolase class-II IX91_01870 PF05552 Conserved TM helix IX91_01870 PF00924 Mechanosensitive ion channel IX91_01880 PF01810 LysE type translocator IX91_01885 PF03466 LysR substrate binding domain IX91_01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_01890 PF04402 Protein of unknown function (DUF541) IX91_01895 PF00990 Diguanylate cyclase, GGDEF domain IX91_01895 PF17158 Membrane-associated sensor, integral membrane domain IX91_01905 PF00224 Pyruvate kinase, barrel domain IX91_01905 PF02887 Pyruvate kinase, alpha/beta domain IX91_01910 PF08220 DeoR-like helix-turn-helix domain IX91_01910 PF00455 DeoR C terminal sensor domain IX91_01915 PF01380 SIS domain IX91_01925 PF13419 Haloacid dehalogenase-like hydrolase IX91_01930 PF05068 Mannitol repressor IX91_01935 PF08125 Mannitol dehydrogenase C-terminal domain IX91_01935 PF01232 Mannitol dehydrogenase Rossmann domain IX91_01940 PF02378 Phosphotransferase system, EIIC IX91_01940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX91_01940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_01945 PF03480 Bacterial extracellular solute-binding protein, family 7 IX91_01955 PF00348 Polyprenyl synthetase IX91_01965 PF00829 Ribosomal prokaryotic L21 protein IX91_01970 PF01016 Ribosomal L27 protein IX91_01975 PF01926 50S ribosome-binding GTPase IX91_01975 PF01018 GTP1/OBG IX91_01980 PF12821 Threonine/Serine exporter, ThrE IX91_01980 PF06738 Putative threonine/serine exporter IX91_01985 PF12821 Threonine/Serine exporter, ThrE IX91_01990 PF00186 Dihydrofolate reductase IX91_01995 PF00149 Calcineurin-like phosphoesterase IX91_02000 PF04379 ApaG domain IX91_02005 PF00398 Ribosomal RNA adenine dimethylase IX91_02010 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IX91_02015 PF09312 SurA N-terminal domain IX91_02015 PF00639 PPIC-type PPIASE domain IX91_02020 PF03968 OstA-like protein IX91_02020 PF04453 LPS transport system D IX91_02025 PF05099 Tellurite resistance protein TerB IX91_02025 PF00226 DnaJ domain IX91_02030 PF00072 Response regulator receiver domain IX91_02035 PF00589 Phage integrase family IX91_02080 PF05840 Bacteriophage replication gene A protein (GPA) IX91_02105 PF04546 Sigma-70, non-essential region IX91_02105 PF04542 Sigma-70 region 2 IX91_02105 PF00140 Sigma-70 factor, region 1.2 IX91_02105 PF04545 Sigma-70, region 4 IX91_02105 PF04539 Sigma-70 region 3 IX91_02105 PF03979 Sigma-70 factor, region 1.1 IX91_02110 PF08275 DNA primase catalytic core, N-terminal domain IX91_02110 PF01807 CHC2 zinc finger IX91_02110 PF08278 DNA primase DnaG DnaB-binding IX91_02110 PF10410 DnaB-helicase binding domain of primase IX91_02115 PF09424 Yqey-like protein IX91_02120 PF01165 Ribosomal protein S21 IX91_02125 PF00814 Glycoprotease family IX91_02130 PF00561 alpha/beta hydrolase fold IX91_02135 PF02660 Glycerol-3-phosphate acyltransferase IX91_02140 PF02152 Dihydroneopterin aldolase IX91_02145 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IX91_02155 PF04977 Septum formation initiator IX91_02160 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IX91_02165 PF02542 YgbB family IX91_02170 PF01142 tRNA pseudouridine synthase D (TruD) IX91_02175 PF01975 Survival protein SurE IX91_02185 PF01551 Peptidase family M23 IX91_02185 PF01476 LysM domain IX91_02190 PF04539 Sigma-70 region 3 IX91_02190 PF04542 Sigma-70 region 2 IX91_02190 PF00140 Sigma-70 factor, region 1.2 IX91_02190 PF04545 Sigma-70, region 4 IX91_02195 PF00571 CBS domain IX91_02195 PF01595 Cyclin M transmembrane N-terminal domain IX91_02195 PF03471 Transporter associated domain IX91_02200 PF01578 Cytochrome C assembly protein IX91_02205 PF00448 SRP54-type protein, GTPase domain IX91_02205 PF02978 Signal peptide binding domain IX91_02205 PF02881 SRP54-type protein, helical bundle domain IX91_02210 PF00886 Ribosomal protein S16 IX91_02215 PF05239 PRC-barrel domain IX91_02215 PF01782 RimM N-terminal domain IX91_02225 PF01245 Ribosomal protein L19 IX91_02235 PF03884 DNA gyrase inhibitor YacG IX91_02240 PF07072 Cell division protein IX91_02245 PF01121 Dephospho-CoA kinase IX91_02250 PF01478 Type IV leader peptidase family IX91_02250 PF06750 Bacterial Peptidase A24 N-terminal domain IX91_02255 PF00482 Type II secretion system (T2SS), protein F IX91_02260 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IX91_02260 PF00437 Type II/IV secretion system protein IX91_02270 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IX91_02270 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IX91_02275 PF01510 N-acetylmuramoyl-L-alanine amidase IX91_02280 PF00258 Flavodoxin IX91_02285 PF02899 Phage integrase, N-terminal SAM-like domain IX91_02285 PF00589 Phage integrase family IX91_02290 PF13098 Thioredoxin-like domain IX91_02290 PF10411 Disulfide bond isomerase protein N-terminus IX91_02295 PF02272 DHHA1 domain IX91_02295 PF01368 DHH family IX91_02295 PF17768 RecJ OB domain IX91_02300 PF00392 Bacterial regulatory proteins, gntR family IX91_02300 PF07729 FCD domain IX91_02305 PF00456 Transketolase, thiamine diphosphate binding domain IX91_02305 PF17831 Pyruvate dehydrogenase E1 component middle domain IX91_02310 PF00364 Biotin-requiring enzyme IX91_02310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX91_02310 PF02817 e3 binding domain IX91_02315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX91_02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_02320 PF00440 Bacterial regulatory proteins, tetR family IX91_02325 PF00156 Phosphoribosyl transferase domain IX91_02330 PF00484 Carbonic anhydrase IX91_02335 PF01740 STAS domain IX91_02335 PF00916 Sulfate permease family IX91_02340 PF00005 ABC transporter IX91_02345 PF01061 ABC-2 type transporter IX91_02350 PF02569 Pantoate-beta-alanine ligase IX91_02355 PF02548 Ketopantoate hydroxymethyltransferase IX91_02360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IX91_02365 PF01743 Poly A polymerase head domain IX91_02365 PF12626 Polymerase A arginine-rich C-terminus IX91_02365 PF12627 Probable RNA and SrmB- binding site of polymerase A IX91_02370 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX91_02375 PF01258 Prokaryotic dksA/traR C4-type zinc finger IX91_02380 PF17746 SfsA N-terminal OB domain IX91_02380 PF03749 Sugar fermentation stimulation protein RE domain IX91_02385 PF00270 DEAD/DEAH box helicase IX91_02385 PF08482 ATP-dependent helicase C-terminal IX91_02385 PF04408 Helicase associated domain (HA2) IX91_02385 PF00271 Helicase conserved C-terminal domain IX91_02390 PF00912 Transglycosylase IX91_02390 PF00905 Penicillin binding protein transpeptidase domain IX91_02390 PF14814 Bifunctional transglycosylase second domain IX91_02395 PF01734 Patatin-like phospholipase IX91_02400 PF11791 Aconitate B N-terminal domain IX91_02400 PF06434 Aconitate hydratase 2 N-terminus IX91_02400 PF00330 Aconitase family (aconitate hydratase) IX91_02410 PF06062 Uncharacterised protein family (UPF0231) IX91_02415 PF00543 Nitrogen regulatory protein P-II IX91_02420 PF00909 Ammonium Transporter Family IX91_02425 PF13416 Bacterial extracellular solute-binding protein IX91_02435 PF00005 ABC transporter IX91_02435 PF08402 TOBE domain IX91_02440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX91_02440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX91_02440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX91_02440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX91_02445 PF06165 Glycosyltransferase family 36 IX91_02445 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IX91_02450 PF00728 Glycosyl hydrolase family 20, catalytic domain IX91_02450 PF02838 Glycosyl hydrolase family 20, domain 2 IX91_02455 PF01869 BadF/BadG/BcrA/BcrD ATPase family IX91_02465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_02465 PF00005 ABC transporter IX91_02470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_02470 PF00005 ABC transporter IX91_02475 PF00528 Binding-protein-dependent transport system inner membrane component IX91_02475 PF12911 N-terminal TM domain of oligopeptide transport permease C IX91_02480 PF00528 Binding-protein-dependent transport system inner membrane component IX91_02485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_02490 PF00512 His Kinase A (phospho-acceptor) domain IX91_02490 PF00072 Response regulator receiver domain IX91_02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_02490 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_02495 PF05175 Methyltransferase small domain IX91_02495 PF08468 Methyltransferase small domain N-terminal IX91_02500 PF01594 AI-2E family transporter IX91_02505 PF00202 Aminotransferase class-III IX91_02510 PF01521 Iron-sulphur cluster biosynthesis IX91_02520 PF00873 AcrB/AcrD/AcrF family IX91_02525 PF01476 LysM domain IX91_02525 PF08525 Opacity-associated protein A N-terminal motif IX91_02525 PF01551 Peptidase family M23 IX91_02530 PF00579 tRNA synthetases class I (W and Y) IX91_02540 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IX91_02545 PF13609 Gram-negative porin IX91_02555 PF03449 Transcription elongation factor, N-terminal IX91_02555 PF01272 Transcription elongation factor, GreA/GreB, C-term IX91_02560 PF01985 CRS1 / YhbY (CRM) domain IX91_02565 PF01728 FtsJ-like methyltransferase IX91_02570 PF00004 ATPase family associated with various cellular activities (AAA) IX91_02570 PF01434 Peptidase family M41 IX91_02570 PF06480 FtsH Extracellular IX91_02570 PF17862 AAA+ lid domain IX91_02575 PF00809 Pterin binding enzyme IX91_02580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX91_02580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX91_02580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX91_02580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX91_02590 PF00583 Acetyltransferase (GNAT) family IX91_02595 PF00990 Diguanylate cyclase, GGDEF domain IX91_02595 PF03707 Bacterial signalling protein N terminal repeat IX91_02595 PF00563 EAL domain IX91_02600 PF00009 Elongation factor Tu GTP binding domain IX91_02600 PF16658 Class II release factor RF3, C-terminal domain IX91_02600 PF03144 Elongation factor Tu domain 2 IX91_02605 PF00270 DEAD/DEAH box helicase IX91_02605 PF00271 Helicase conserved C-terminal domain IX91_02610 PF05175 Methyltransferase small domain IX91_02615 PF05525 Branched-chain amino acid transport protein IX91_02620 PF00472 RF-1 domain IX91_02620 PF03462 PCRF domain IX91_02625 PF00152 tRNA synthetases class II (D, K and N) IX91_02625 PF01336 OB-fold nucleic acid binding domain IX91_02630 PF02954 Bacterial regulatory protein, Fis family IX91_02630 PF00158 Sigma-54 interaction domain IX91_02630 PF00072 Response regulator receiver domain IX91_02645 PF00248 Aldo/keto reductase family IX91_02655 PF02976 DNA mismatch repair enzyme MutH IX91_02665 PF00391 PEP-utilising enzyme, mobile domain IX91_02665 PF02896 PEP-utilising enzyme, TIM barrel domain IX91_02665 PF01590 GAF domain IX91_02665 PF05524 PEP-utilising enzyme, N-terminal IX91_02670 PF01925 Sulfite exporter TauE/SafE IX91_02680 PF00303 Thymidylate synthase IX91_02685 PF02690 Na+/Pi-cotransporter IX91_02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_02690 PF03466 LysR substrate binding domain IX91_02695 PF01022 Bacterial regulatory protein, arsR family IX91_02700 PF01649 Ribosomal protein S20 IX91_02705 PF03023 Lipid II flippase MurJ IX91_02710 PF06574 FAD synthetase IX91_02710 PF01687 Riboflavin kinase IX91_02715 PF08264 Anticodon-binding domain of tRNA IX91_02715 PF06827 Zinc finger found in FPG and IleRS IX91_02715 PF00133 tRNA synthetases class I (I, L, M and V) IX91_02720 PF01252 Signal peptidase (SPase) II IX91_02725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX91_02730 PF02401 LytB protein IX91_02735 PF00675 Insulinase (Peptidase family M16) IX91_02735 PF05193 Peptidase M16 inactive domain IX91_02740 PF02554 Carbon starvation protein CstA IX91_02750 PF13580 SIS domain IX91_02755 PF03702 Anhydro-N-acetylmuramic acid kinase IX91_02770 PF01418 Helix-turn-helix domain, rpiR family IX91_02770 PF01380 SIS domain IX91_02775 PF00933 Glycosyl hydrolase family 3 N terminal domain IX91_02780 PF00072 Response regulator receiver domain IX91_02780 PF04397 LytTr DNA-binding domain IX91_02785 PF07694 5TMR of 5TMR-LYT IX91_02785 PF06580 Histidine kinase IX91_02790 PF00793 DAHP synthetase I family IX91_02795 PF02153 Prephenate dehydrogenase IX91_02795 PF01817 Chorismate mutase type II IX91_02800 PF04225 Opacity-associated protein A LysM-like domain IX91_02800 PF01551 Peptidase family M23 IX91_02805 PF07238 PilZ domain IX91_02810 PF12848 ABC transporter IX91_02810 PF00005 ABC transporter IX91_02815 PF14718 Soluble lytic murein transglycosylase L domain IX91_02815 PF01464 Transglycosylase SLT domain IX91_02820 PF01371 Trp repressor protein IX91_02825 PF01931 Protein of unknown function DUF84 IX91_02830 PF00563 EAL domain IX91_02830 PF00990 Diguanylate cyclase, GGDEF domain IX91_02835 PF13416 Bacterial extracellular solute-binding protein IX91_02840 PF01817 Chorismate mutase type II IX91_02840 PF00800 Prephenate dehydratase IX91_02845 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IX91_02850 PF01464 Transglycosylase SLT domain IX91_02850 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_02855 PF13525 Outer membrane lipoprotein IX91_02860 PF00849 RNA pseudouridylate synthase IX91_02860 PF01479 S4 domain IX91_02870 PF02861 Clp amino terminal domain, pathogenicity island component IX91_02870 PF10431 C-terminal, D2-small domain, of ClpB protein IX91_02870 PF17871 AAA lid domain IX91_02870 PF07724 AAA domain (Cdc48 subfamily) IX91_02870 PF00004 ATPase family associated with various cellular activities (AAA) IX91_02910 PF13091 PLD-like domain IX91_02915 PF00459 Inositol monophosphatase family IX91_02920 PF00588 SpoU rRNA Methylase family IX91_02925 PF02082 Transcriptional regulator IX91_02930 PF00266 Aminotransferase class-V IX91_02935 PF01592 NifU-like N terminal domain IX91_02940 PF01521 Iron-sulphur cluster biosynthesis IX91_02945 PF00226 DnaJ domain IX91_02945 PF07743 HSCB C-terminal oligomerisation domain IX91_02950 PF00012 Hsp70 protein IX91_02955 PF00111 2Fe-2S iron-sulfur cluster binding domain IX91_02960 PF04384 Iron-sulphur cluster assembly IX91_02965 PF00883 Cytosol aminopeptidase family, catalytic domain IX91_02965 PF12404 Peptidase IX91_02970 PF00334 Nucleoside diphosphate kinase IX91_02975 PF00009 Elongation factor Tu GTP binding domain IX91_02975 PF14492 Elongation Factor G, domain II IX91_02975 PF03144 Elongation factor Tu domain 2 IX91_02975 PF00679 Elongation factor G C-terminus IX91_02975 PF03764 Elongation factor G, domain IV IX91_02980 PF03466 LysR substrate binding domain IX91_02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_02990 PF03466 LysR substrate binding domain IX91_02990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_02995 PF00501 AMP-binding enzyme IX91_03000 PF12833 Helix-turn-helix domain IX91_03000 PF02805 Metal binding domain of Ada IX91_03030 PF13629 Pilus formation protein N terminal region IX91_03030 PF04972 BON domain IX91_03030 PF00263 Bacterial type II and III secretion system protein IX91_03060 PF00437 Type II/IV secretion system protein IX91_03085 PF03466 LysR substrate binding domain IX91_03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03090 PF17912 MalK OB fold domain IX91_03090 PF00005 ABC transporter IX91_03105 PF00528 Binding-protein-dependent transport system inner membrane component IX91_03115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IX91_03115 PF02929 Beta galactosidase small chain IX91_03115 PF16353 Domain of unknown function(DUF4981) IX91_03115 PF00703 Glycosyl hydrolases family 2 IX91_03115 PF02837 Glycosyl hydrolases family 2, sugar binding domain IX91_03120 PF01204 Trehalase IX91_03125 PF07883 Cupin domain IX91_03125 PF12833 Helix-turn-helix domain IX91_03140 PF12706 Beta-lactamase superfamily domain IX91_03150 PF13520 Amino acid permease IX91_03155 PF04074 YhcH/YjgK/YiaL IX91_03160 PF02837 Glycosyl hydrolases family 2, sugar binding domain IX91_03160 PF00703 Glycosyl hydrolases family 2 IX91_03160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IX91_03160 PF02929 Beta galactosidase small chain IX91_03160 PF16353 Domain of unknown function(DUF4981) IX91_03165 PF00356 Bacterial regulatory proteins, lacI family IX91_03170 PF16363 GDP-mannose 4,6 dehydratase IX91_03175 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IX91_03175 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IX91_03180 PF00288 GHMP kinases N terminal domain IX91_03180 PF08544 GHMP kinases C terminal IX91_03180 PF10509 Galactokinase galactose-binding signature IX91_03185 PF01263 Aldose 1-epimerase IX91_03195 PF10417 C-terminal domain of 1-Cys peroxiredoxin IX91_03195 PF00578 AhpC/TSA family IX91_03200 PF13192 Thioredoxin domain IX91_03200 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03205 PF03466 LysR substrate binding domain IX91_03210 PF00248 Aldo/keto reductase family IX91_03215 PF00356 Bacterial regulatory proteins, lacI family IX91_03220 PF01588 Putative tRNA binding domain IX91_03235 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IX91_03235 PF01266 FAD dependent oxidoreductase IX91_03240 PF08220 DeoR-like helix-turn-helix domain IX91_03240 PF00455 DeoR C terminal sensor domain IX91_03245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IX91_03245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IX91_03250 PF07690 Major Facilitator Superfamily IX91_03255 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle IX91_03255 PF14602 Hexapeptide repeat of succinyl-transferase IX91_03260 PF10417 C-terminal domain of 1-Cys peroxiredoxin IX91_03260 PF00578 AhpC/TSA family IX91_03265 PF03466 LysR substrate binding domain IX91_03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03270 PF01274 Malate synthase IX91_03275 PF00463 Isocitrate lyase family IX91_03280 PF00571 CBS domain IX91_03285 PF02547 Queuosine biosynthesis protein IX91_03290 PF01702 Queuine tRNA-ribosyltransferase IX91_03295 PF02699 Preprotein translocase subunit IX91_03300 PF13721 SecD export protein N-terminal TM region IX91_03300 PF02355 Protein export membrane protein IX91_03300 PF07549 SecD/SecF GG Motif IX91_03305 PF02355 Protein export membrane protein IX91_03305 PF07549 SecD/SecF GG Motif IX91_03315 PF13407 Periplasmic binding protein domain IX91_03325 PF03411 Penicillin-insensitive murein endopeptidase IX91_03330 PF12838 4Fe-4S dicluster domain IX91_03340 PF04381 Putative exonuclease, RdgC IX91_03345 PF00486 Transcriptional regulatory protein, C terminal IX91_03345 PF00072 Response regulator receiver domain IX91_03350 PF00989 PAS fold IX91_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_03350 PF00512 His Kinase A (phospho-acceptor) domain IX91_03350 PF11808 Phosphate regulon sensor protein PhoR IX91_03355 PF12849 PBP superfamily domain IX91_03360 PF02541 Ppx/GppA phosphatase family IX91_03365 PF13089 Polyphosphate kinase N-terminal domain IX91_03365 PF17941 Polyphosphate kinase C-terminal domain 1 IX91_03365 PF13090 Polyphosphate kinase C-terminal domain 2 IX91_03365 PF02503 Polyphosphate kinase middle domain IX91_03370 PF00528 Binding-protein-dependent transport system inner membrane component IX91_03375 PF00528 Binding-protein-dependent transport system inner membrane component IX91_03380 PF00005 ABC transporter IX91_03385 PF01895 PhoU domain IX91_03395 PF03466 LysR substrate binding domain IX91_03395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03400 PF03976 Polyphosphate kinase 2 (PPK2) IX91_03405 PF03932 CutC family IX91_03410 PF07130 YebG protein IX91_03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03415 PF03466 LysR substrate binding domain IX91_03425 PF00158 Sigma-54 interaction domain IX91_03425 PF01590 GAF domain IX91_03425 PF02954 Bacterial regulatory protein, Fis family IX91_03430 PF00005 ABC transporter IX91_03430 PF17912 MalK OB fold domain IX91_03435 PF17912 MalK OB fold domain IX91_03435 PF00005 ABC transporter IX91_03440 PF00528 Binding-protein-dependent transport system inner membrane component IX91_03445 PF00528 Binding-protein-dependent transport system inner membrane component IX91_03460 PF17946 RecC C-terminal domain IX91_03465 PF13361 UvrD-like helicase C-terminal domain IX91_03465 PF12705 PD-(D/E)XK nuclease superfamily IX91_03465 PF00580 UvrD/REP helicase N-terminal domain IX91_03470 PF13538 UvrD-like helicase C-terminal domain IX91_03490 PF03562 MltA specific insert domain IX91_03490 PF06725 3D domain IX91_03495 PF00899 ThiF family IX91_03500 PF02657 Fe-S metabolism associated domain IX91_03505 PF04055 Radical SAM superfamily IX91_03510 PF13464 Domain of unknown function (DUF4115) IX91_03515 PF04551 GcpE protein IX91_03520 PF03129 Anticodon binding domain IX91_03520 PF13393 Histidyl-tRNA synthetase IX91_03525 PF09976 Tetratricopeptide repeat-like domain IX91_03530 PF13360 PQQ-like domain IX91_03535 PF01926 50S ribosome-binding GTPase IX91_03535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IX91_03545 PF17151 Periplasmic sensor domain IX91_03545 PF00990 Diguanylate cyclase, GGDEF domain IX91_03555 PF02601 Exonuclease VII, large subunit IX91_03555 PF13742 OB-fold nucleic acid binding domain IX91_03560 PF00571 CBS domain IX91_03560 PF00478 IMP dehydrogenase / GMP reductase domain IX91_03565 PF00958 GMP synthase C terminal domain IX91_03565 PF00117 Glutamine amidotransferase class-I IX91_03565 PF02540 NAD synthase IX91_03570 PF06483 Chitinase C IX91_03570 PF00704 Glycosyl hydrolases family 18 IX91_03575 PF01184 GPR1/FUN34/yaaH family IX91_03580 PF01235 Sodium:alanine symporter family IX91_03585 PF01266 FAD dependent oxidoreductase IX91_03590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03590 PF03466 LysR substrate binding domain IX91_03595 PF07885 Ion channel IX91_03610 PF01053 Cys/Met metabolism PLP-dependent enzyme IX91_03615 PF00571 CBS domain IX91_03615 PF03471 Transporter associated domain IX91_03615 PF01595 Cyclin M transmembrane N-terminal domain IX91_03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03620 PF03466 LysR substrate binding domain IX91_03630 PF10996 Beta-Casp domain IX91_03630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IX91_03630 PF00753 Metallo-beta-lactamase superfamily IX91_03635 PF01553 Acyltransferase IX91_03650 PF00924 Mechanosensitive ion channel IX91_03665 PF01300 Telomere recombination IX91_03665 PF03481 Putative GTP-binding controlling metal-binding IX91_03670 PF01266 FAD dependent oxidoreductase IX91_03680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_03685 PF02028 BCCT, betaine/carnitine/choline family transporter IX91_03690 PF01238 Phosphomannose isomerase type I IX91_03695 PF07690 Major Facilitator Superfamily IX91_03700 PF05231 MASE1 IX91_03700 PF07730 Histidine kinase IX91_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_03705 PF00196 Bacterial regulatory proteins, luxR family IX91_03705 PF00072 Response regulator receiver domain IX91_03710 PF07690 Major Facilitator Superfamily IX91_03740 PF02127 Aminopeptidase I zinc metalloprotease (M18) IX91_03755 PF00224 Pyruvate kinase, barrel domain IX91_03755 PF00391 PEP-utilising enzyme, mobile domain IX91_03755 PF02887 Pyruvate kinase, alpha/beta domain IX91_03785 PF00005 ABC transporter IX91_03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_03815 PF03466 LysR substrate binding domain IX91_03820 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IX91_03820 PF05221 S-adenosyl-L-homocysteine hydrolase IX91_03825 PF01773 Na+ dependent nucleoside transporter N-terminus IX91_03825 PF07670 Nucleoside recognition IX91_03825 PF07662 Na+ dependent nucleoside transporter C-terminus IX91_03830 PF00589 Phage integrase family IX91_03830 PF13356 Arm DNA-binding domain IX91_03835 PF01668 SmpB protein IX91_03840 PF03364 Polyketide cyclase / dehydrase and lipid transport IX91_03845 PF03658 RnfH family Ubiquitin IX91_03850 PF04355 SmpA / OmlA family IX91_03855 PF02463 RecF/RecN/SMC N terminal domain IX91_03865 PF01025 GrpE IX91_03870 PF00375 Sodium:dicarboxylate symporter family IX91_03885 PF00012 Hsp70 protein IX91_03890 PF00684 DnaJ central domain IX91_03890 PF00226 DnaJ domain IX91_03890 PF01556 DnaJ C terminal domain IX91_03895 PF07963 Prokaryotic N-terminal methylation motif IX91_03895 PF00114 Pilin (bacterial filament) IX91_03900 PF07963 Prokaryotic N-terminal methylation motif IX91_03900 PF12019 Type II transport protein GspH IX91_03920 PF03806 AbgT putative transporter family IX91_03930 PF14437 MafB19-like deaminase IX91_03940 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_03940 PF01464 Transglycosylase SLT domain IX91_03945 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IX91_03945 PF02769 AIR synthase related protein, C-terminal domain IX91_03945 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IX91_03960 PF06786 Uncharacterised protein family (UPF0253) IX91_03970 PF00551 Formyl transferase IX91_03975 PF02769 AIR synthase related protein, C-terminal domain IX91_03975 PF00586 AIR synthase related protein, N-terminal domain IX91_03990 PF01479 S4 domain IX91_03990 PF00849 RNA pseudouridylate synthase IX91_03995 PF01713 Smr domain IX91_04020 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain IX91_04020 PF03173 Putative carbohydrate binding domain IX91_04020 PF00728 Glycosyl hydrolase family 20, catalytic domain IX91_04020 PF02838 Glycosyl hydrolase family 20, domain 2 IX91_04025 PF00854 POT family IX91_04030 PF00733 Asparagine synthase IX91_04030 PF13537 Glutamine amidotransferase domain IX91_04035 PF02254 TrkA-N domain IX91_04035 PF00999 Sodium/hydrogen exchanger family IX91_04040 PF01047 MarR family IX91_04040 PF00480 ROK family IX91_04045 PF01979 Amidohydrolase family IX91_04050 PF02378 Phosphotransferase system, EIIC IX91_04050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IX91_04050 PF00367 phosphotransferase system, EIIB IX91_04060 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX91_04060 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IX91_04065 PF01475 Ferric uptake regulator family IX91_04075 PF00258 Flavodoxin IX91_04085 PF12697 Alpha/beta hydrolase family IX91_04090 PF03925 SeqA protein C-terminal domain IX91_04090 PF17206 SeqA protein N-terminal domain IX91_04095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX91_04095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX91_04095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX91_04095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX91_04105 PF01784 NIF3 (NGG1p interacting factor 3) IX91_04110 PF00285 Citrate synthase, C-terminal domain IX91_04115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IX91_04120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IX91_04125 PF00890 FAD binding domain IX91_04125 PF02910 Fumarate reductase flavoprotein C-term IX91_04130 PF13085 2Fe-2S iron-sulfur cluster binding domain IX91_04135 PF16078 2-oxoglutarate dehydrogenase N-terminus IX91_04135 PF00676 Dehydrogenase E1 component IX91_04135 PF16870 2-oxoglutarate dehydrogenase C-terminal IX91_04135 PF02779 Transketolase, pyrimidine binding domain IX91_04140 PF02817 e3 binding domain IX91_04140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX91_04140 PF00364 Biotin-requiring enzyme IX91_04145 PF00549 CoA-ligase IX91_04145 PF08442 ATP-grasp domain IX91_04150 PF02629 CoA binding domain IX91_04150 PF00549 CoA-ligase IX91_04180 PF04287 tRNA pseudouridine synthase C IX91_04185 PF00849 RNA pseudouridylate synthase IX91_04190 PF06291 Bor protein IX91_04195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IX91_04195 PF02779 Transketolase, pyrimidine binding domain IX91_04195 PF02780 Transketolase, C-terminal domain IX91_04200 PF00348 Polyprenyl synthetase IX91_04205 PF02609 Exonuclease VII small subunit IX91_04210 PF01618 MotA/TolQ/ExbB proton channel family IX91_04215 PF00691 OmpA family IX91_04215 PF13677 Membrane MotB of proton-channel complex MotA/MotB IX91_04220 PF02926 THUMP domain IX91_04220 PF02568 Thiamine biosynthesis protein (ThiI) IX91_04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_04225 PF03466 LysR substrate binding domain IX91_04235 PF04241 Protein of unknown function (DUF423) IX91_04240 PF18125 RlmM ferredoxin-like domain IX91_04240 PF01728 FtsJ-like methyltransferase IX91_04245 PF01223 DNA/RNA non-specific endonuclease IX91_04250 PF01367 5'-3' exonuclease, C-terminal SAM fold IX91_04250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IX91_04255 PF11892 Domain of unknown function (DUF3412) IX91_04255 PF03641 Possible lysine decarboxylase IX91_04255 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IX91_04260 PF00990 Diguanylate cyclase, GGDEF domain IX91_04260 PF00072 Response regulator receiver domain IX91_04270 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IX91_04270 PF14489 QueF-like protein IX91_04275 PF07348 Syd protein (SUKH-2) IX91_04280 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) IX91_04290 PF02557 D-alanyl-D-alanine carboxypeptidase IX91_04295 PF01546 Peptidase family M20/M25/M40 IX91_04295 PF07687 Peptidase dimerisation domain IX91_04300 PF03960 ArsC family IX91_04310 PF13698 Domain of unknown function (DUF4156) IX91_04325 PF00106 short chain dehydrogenase IX91_04330 PF02335 Cytochrome c552 IX91_04340 PF13247 4Fe-4S dicluster domain IX91_04345 PF03916 Polysulphide reductase, NrfD IX91_04350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IX91_04350 PF01578 Cytochrome C assembly protein IX91_04355 PF08534 Redoxin IX91_04360 PF03918 Cytochrome C biogenesis protein IX91_04370 PF11143 Protein of unknown function (DUF2919) IX91_04375 PF04261 Dyp-type peroxidase family IX91_04380 PF00669 Bacterial flagellin N-terminal helical region IX91_04380 PF07196 Flagellin hook IN motif IX91_04380 PF00700 Bacterial flagellin C-terminal helical region IX91_04385 PF07196 Flagellin hook IN motif IX91_04385 PF00700 Bacterial flagellin C-terminal helical region IX91_04385 PF00669 Bacterial flagellin N-terminal helical region IX91_04390 PF07196 Flagellin hook IN motif IX91_04390 PF00669 Bacterial flagellin N-terminal helical region IX91_04390 PF00700 Bacterial flagellin C-terminal helical region IX91_04395 PF03646 FlaG protein IX91_04400 PF07196 Flagellin hook IN motif IX91_04400 PF02465 Flagellar hook-associated protein 2 N-terminus IX91_04400 PF07195 Flagellar hook-associated protein 2 C-terminus IX91_04410 PF02561 Flagellar protein FliS IX91_04415 PF00158 Sigma-54 interaction domain IX91_04415 PF02954 Bacterial regulatory protein, Fis family IX91_04415 PF00072 Response regulator receiver domain IX91_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_04420 PF00512 His Kinase A (phospho-acceptor) domain IX91_04425 PF02954 Bacterial regulatory protein, Fis family IX91_04425 PF00072 Response regulator receiver domain IX91_04425 PF00158 Sigma-54 interaction domain IX91_04430 PF02049 Flagellar hook-basal body complex protein FliE IX91_04435 PF01514 Secretory protein of YscJ/FliF family IX91_04435 PF08345 Flagellar M-ring protein C-terminal IX91_04440 PF14841 FliG middle domain IX91_04440 PF14842 FliG N-terminal domain IX91_04440 PF01706 FliG C-terminal domain IX91_04450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX91_04450 PF18269 T3SS EscN ATPase C-terminal domain IX91_04465 PF03748 Flagellar basal body-associated protein FliL IX91_04470 PF02154 Flagellar motor switch protein FliM IX91_04470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IX91_04475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IX91_04480 PF04347 Flagellar biosynthesis protein, FliO IX91_04485 PF00813 FliP family IX91_04490 PF01313 Bacterial export proteins, family 3 IX91_04495 PF01311 Bacterial export proteins, family 1 IX91_04500 PF01312 FlhB HrpN YscU SpaS Family IX91_04505 PF01713 Smr domain IX91_04510 PF05175 Methyltransferase small domain IX91_04515 PF01264 Chorismate synthase IX91_04520 PF02872 5'-nucleotidase, C-terminal domain IX91_04520 PF00149 Calcineurin-like phosphoesterase IX91_04530 PF03458 UPF0126 domain IX91_04535 PF04315 Elongation factor P hydroxylase IX91_04550 PF08891 YfcL protein IX91_04555 PF03358 NADPH-dependent FMN reductase IX91_04560 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IX91_04560 PF01266 FAD dependent oxidoreductase IX91_04565 PF02801 Beta-ketoacyl synthase, C-terminal domain IX91_04565 PF00109 Beta-ketoacyl synthase, N-terminal domain IX91_04570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX91_04570 PF11890 Domain of unknown function (DUF3410) IX91_04570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX91_04575 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX91_04575 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX91_04585 PF01416 tRNA pseudouridine synthase IX91_04590 PF17848 Acetyl-coA carboxylase zinc finger domain IX91_04590 PF01039 Carboxyl transferase domain IX91_04595 PF02875 Mur ligase family, glutamate ligase domain IX91_04595 PF08245 Mur ligase middle domain IX91_04600 PF05036 Sporulation related domain IX91_04605 PF02674 Colicin V production protein IX91_04610 PF00156 Phosphoribosyl transferase domain IX91_04615 PF00950 ABC 3 transport family IX91_04620 PF00005 ABC transporter IX91_04625 PF01297 Zinc-uptake complex component A periplasmic IX91_04630 PF02311 AraC-like ligand binding domain IX91_04630 PF12833 Helix-turn-helix domain IX91_04640 PF04023 FeoA domain IX91_04645 PF07664 Ferrous iron transport protein B C terminus IX91_04645 PF02421 Ferrous iron transport protein B IX91_04645 PF07670 Nucleoside recognition IX91_04660 PF00750 tRNA synthetases class I (R) IX91_04660 PF03485 Arginyl tRNA synthetase N terminal domain IX91_04660 PF05746 DALR anticodon binding domain IX91_04670 PF06185 YecM protein IX91_04675 PF00675 Insulinase (Peptidase family M16) IX91_04675 PF16187 Middle or third domain of peptidase_M16 IX91_04675 PF05193 Peptidase M16 inactive domain IX91_04685 PF00300 Histidine phosphatase superfamily (branch 1) IX91_04690 PF00771 FHIPEP family IX91_04695 PF00448 SRP54-type protein, GTPase domain IX91_04700 PF10609 NUBPL iron-transfer P-loop NTPase IX91_04705 PF04545 Sigma-70, region 4 IX91_04705 PF04542 Sigma-70 region 2 IX91_04705 PF04539 Sigma-70 region 3 IX91_04710 PF00072 Response regulator receiver domain IX91_04715 PF04344 Chemotaxis phosphatase, CheZ IX91_04720 PF02895 Signal transducing histidine kinase, homodimeric domain IX91_04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_04720 PF01627 Hpt domain IX91_04720 PF01584 CheW-like domain IX91_04720 PF07194 P2 response regulator binding domain IX91_04725 PF01339 CheB methylesterase IX91_04725 PF00072 Response regulator receiver domain IX91_04730 PF13614 AAA domain IX91_04740 PF01584 CheW-like domain IX91_04750 PF00005 ABC transporter IX91_04755 PF03379 CcmB protein IX91_04760 PF01578 Cytochrome C assembly protein IX91_04765 PF04995 Heme exporter protein D (CcmD) IX91_04770 PF03100 CcmE IX91_04775 PF01578 Cytochrome C assembly protein IX91_04775 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IX91_04780 PF08534 Redoxin IX91_04785 PF03918 Cytochrome C biogenesis protein IX91_04790 PF03918 Cytochrome C biogenesis protein IX91_04795 PF04333 MlaA lipoprotein IX91_04800 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX91_04805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX91_04815 PF04542 Sigma-70 region 2 IX91_04815 PF08281 Sigma-70, region 4 IX91_04820 PF02803 Thiolase, C-terminal domain IX91_04820 PF00108 Thiolase, N-terminal domain IX91_04825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX91_04825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX91_04825 PF00378 Enoyl-CoA hydratase/isomerase IX91_04830 PF00881 Nitroreductase family IX91_04835 PF03466 LysR substrate binding domain IX91_04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_04840 PF00072 Response regulator receiver domain IX91_04850 PF04304 Protein of unknown function (DUF454) IX91_04855 PF00156 Phosphoribosyl transferase domain IX91_04860 PF12169 DNA polymerase III subunits gamma and tau domain III IX91_04860 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IX91_04860 PF12170 DNA polymerase III tau subunit V interacting with alpha IX91_04865 PF02575 YbaB/EbfC DNA-binding family IX91_04870 PF13662 Toprim domain IX91_04870 PF02132 RecR protein IX91_04880 PF08525 Opacity-associated protein A N-terminal motif IX91_04880 PF01476 LysM domain IX91_04880 PF01551 Peptidase family M23 IX91_04910 PF01590 GAF domain IX91_04910 PF02954 Bacterial regulatory protein, Fis family IX91_04910 PF00158 Sigma-54 interaction domain IX91_04915 PF07724 AAA domain (Cdc48 subfamily) IX91_04915 PF10431 C-terminal, D2-small domain, of ClpB protein IX91_04915 PF00004 ATPase family associated with various cellular activities (AAA) IX91_04915 PF17871 AAA lid domain IX91_04920 PF05638 Type VI secretion system effector, Hcp IX91_04925 PF04717 Type VI secretion system, phage-baseplate injector IX91_04950 PF00069 Protein kinase domain IX91_04985 PF01037 Lrp/AsnC ligand binding domain IX91_05120 PF03692 Putative zinc- or iron-chelating domain IX91_05125 PF00924 Mechanosensitive ion channel IX91_05125 PF05552 Conserved TM helix IX91_05135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_05145 PF02028 BCCT, betaine/carnitine/choline family transporter IX91_05160 PF13847 Methyltransferase domain IX91_05165 PF08447 PAS fold IX91_05165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_05165 PF13426 PAS domain IX91_05175 PF01263 Aldose 1-epimerase IX91_05180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX91_05180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX91_05185 PF01641 SelR domain IX91_05195 PF07023 Protein of unknown function (DUF1315) IX91_05200 PF02810 SEC-C motif IX91_05205 PF00563 EAL domain IX91_05205 PF08668 HDOD domain IX91_05215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IX91_05220 PF09190 DALR domain IX91_05220 PF01406 tRNA synthetases class I (C) catalytic domain IX91_05225 PF00265 Thymidine kinase IX91_05230 PF01176 Translation initiation factor 1A / IF-1 IX91_05235 PF04377 Arginine-tRNA-protein transferase, C terminus IX91_05235 PF04376 Arginine-tRNA-protein transferase, N terminus IX91_05240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IX91_05255 PF10692 Protein of unknown function (DUF2498) IX91_05260 PF01396 Topoisomerase DNA binding C4 zinc finger IX91_05260 PF01131 DNA topoisomerase IX91_05260 PF08272 Topoisomerase I zinc-ribbon-like IX91_05260 PF01751 Toprim domain IX91_05270 PF00483 Nucleotidyl transferase IX91_05295 PF04994 TfoX C-terminal domain IX91_05295 PF04993 TfoX N-terminal domain IX91_05300 PF00356 Bacterial regulatory proteins, lacI family IX91_05305 PF02613 Nitrate reductase delta subunit IX91_05310 PF00486 Transcriptional regulatory protein, C terminal IX91_05310 PF00072 Response regulator receiver domain IX91_05315 PF02698 DUF218 domain IX91_05325 PF17192 MukF middle domain IX91_05325 PF03882 MukF winged-helix domain IX91_05325 PF17193 MukF C-terminal domain IX91_05330 PF04288 MukE-like family IX91_05335 PF16330 MukB hinge domain IX91_05335 PF04310 MukB N-terminal IX91_05340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IX91_05340 PF12833 Helix-turn-helix domain IX91_05345 PF00171 Aldehyde dehydrogenase family IX91_05350 PF00732 GMC oxidoreductase IX91_05350 PF05199 GMC oxidoreductase IX91_05365 PF08443 RimK-like ATP-grasp domain IX91_05365 PF18030 RimK PreATP-grasp domain IX91_05370 PF08003 Protein of unknown function (DUF1698) IX91_05375 PF13649 Methyltransferase domain IX91_05380 PF01904 Protein of unknown function DUF72 IX91_05385 PF00152 tRNA synthetases class II (D, K and N) IX91_05385 PF01336 OB-fold nucleic acid binding domain IX91_05385 PF02938 GAD domain IX91_05390 PF00849 RNA pseudouridylate synthase IX91_05395 PF03971 Monomeric isocitrate dehydrogenase IX91_05400 PF00313 'Cold-shock' DNA-binding domain IX91_05405 PF02617 ATP-dependent Clp protease adaptor protein ClpS IX91_05410 PF17871 AAA lid domain IX91_05410 PF10431 C-terminal, D2-small domain, of ClpB protein IX91_05410 PF07724 AAA domain (Cdc48 subfamily) IX91_05410 PF00004 ATPase family associated with various cellular activities (AAA) IX91_05410 PF02861 Clp amino terminal domain, pathogenicity island component IX91_05420 PF02698 DUF218 domain IX91_05430 PF03466 LysR substrate binding domain IX91_05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_05455 PF01226 Formate/nitrite transporter IX91_05470 PF03649 Uncharacterised protein family (UPF0014) IX91_05475 PF06796 Periplasmic nitrate reductase protein NapE IX91_05480 PF03264 NapC/NirT cytochrome c family, N-terminal region IX91_05485 PF00384 Molybdopterin oxidoreductase IX91_05485 PF18364 Molybdopterin oxidoreductase N-terminal domain IX91_05485 PF01568 Molydopterin dinucleotide binding domain IX91_05505 PF16874 Glycosyl hydrolase family 36 C-terminal domain IX91_05505 PF16875 Glycosyl hydrolase family 36 N-terminal domain IX91_05510 PF02075 Crossover junction endodeoxyribonuclease RuvC IX91_05515 PF00672 HAMP domain IX91_05515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_05515 PF02203 Tar ligand binding domain homologue IX91_05520 PF01330 RuvA N terminal domain IX91_05520 PF07499 RuvA, C-terminal domain IX91_05525 PF05496 Holliday junction DNA helicase RuvB P-loop domain IX91_05525 PF05491 RuvB C-terminal winged helix domain IX91_05525 PF17864 RuvB AAA lid domain IX91_05530 PF01654 Cytochrome bd terminal oxidase subunit I IX91_05535 PF02322 Cytochrome bd terminal oxidase subunit II IX91_05540 PF08173 Membrane bound YbgT-like protein IX91_05550 PF03061 Thioesterase superfamily IX91_05555 PF01618 MotA/TolQ/ExbB proton channel family IX91_05560 PF02472 Biopolymer transport protein ExbD/TolR IX91_05575 PF00691 OmpA family IX91_05580 PF13174 Tetratricopeptide repeat IX91_05580 PF16331 TolA binding protein trimerisation IX91_05585 PF02445 Quinolinate synthetase A protein IX91_05600 PF00072 Response regulator receiver domain IX91_05600 PF09308 LuxQ, periplasmic IX91_05600 PF00512 His Kinase A (phospho-acceptor) domain IX91_05600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_05605 PF06610 L-alanine exporter IX91_05630 PF00293 NUDIX domain IX91_05650 PF04471 Restriction endonuclease IX91_05650 PF14338 Mrr N-terminal domain IX91_05655 PF04851 Type III restriction enzyme, res subunit IX91_05655 PF08463 EcoEI R protein C-terminal IX91_05655 PF00271 Helicase conserved C-terminal domain IX91_05655 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IX91_05660 PF12161 HsdM N-terminal domain IX91_05660 PF02384 N-6 DNA Methylase IX91_05690 PF01238 Phosphomannose isomerase type I IX91_05695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_05695 PF02378 Phosphotransferase system, EIIC IX91_05695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX91_05700 PF12833 Helix-turn-helix domain IX91_05710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX91_05720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_05720 PF00672 HAMP domain IX91_05725 PF03479 Plants and Prokaryotes Conserved (PCC) domain IX91_05725 PF12804 MobA-like NTP transferase domain IX91_05725 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_05740 PF00512 His Kinase A (phospho-acceptor) domain IX91_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_05740 PF00672 HAMP domain IX91_05745 PF00072 Response regulator receiver domain IX91_05745 PF00486 Transcriptional regulatory protein, C terminal IX91_05750 PF00535 Glycosyl transferase family 2 IX91_05755 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IX91_05770 PF09317 Domain of unknown function (DUF1974) IX91_05770 PF02770 Acyl-CoA dehydrogenase, middle domain IX91_05770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX91_05770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX91_05775 PF12241 Trans-2-enoyl-CoA reductase catalytic region IX91_05775 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IX91_05775 PF07055 Enoyl reductase FAD binding domain IX91_05780 PF03372 Endonuclease/Exonuclease/phosphatase family IX91_05785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_05785 PF00672 HAMP domain IX91_05790 PF08007 Cupin superfamily protein IX91_05795 PF10689 Protein of unknown function (DUF2496) IX91_05800 PF07445 Primosomal replication protein priC IX91_05805 PF01925 Sulfite exporter TauE/SafE IX91_05810 PF06733 DEAD_2 IX91_05810 PF13307 Helicase C-terminal domain IX91_05815 PF13609 Gram-negative porin IX91_05820 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IX91_05825 PF00202 Aminotransferase class-III IX91_05830 PF06968 Biotin and Thiamin Synthesis associated domain IX91_05830 PF04055 Radical SAM superfamily IX91_05840 PF08241 Methyltransferase domain IX91_05865 PF00106 short chain dehydrogenase IX91_05890 PF16036 Chalcone isomerase-like IX91_05905 PF08328 Adenylosuccinate lyase C-terminal IX91_05905 PF00206 Lyase IX91_05910 PF04356 Protein of unknown function (DUF489) IX91_05925 PF00294 pfkB family carbohydrate kinase IX91_05930 PF00816 H-NS histone family IX91_05935 PF03553 Na+/H+ antiporter family IX91_05940 PF01634 ATP phosphoribosyltransferase IX91_05940 PF08029 HisG, C-terminal domain IX91_05945 PF00815 Histidinol dehydrogenase IX91_05950 PF00155 Aminotransferase class I and II IX91_05955 PF00475 Imidazoleglycerol-phosphate dehydratase IX91_05955 PF08645 Polynucleotide kinase 3 phosphatase IX91_05960 PF00117 Glutamine amidotransferase class-I IX91_05965 PF00977 Histidine biosynthesis protein IX91_05970 PF00977 Histidine biosynthesis protein IX91_05975 PF01502 Phosphoribosyl-AMP cyclohydrolase IX91_05975 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IX91_05985 PF01368 DHH family IX91_05985 PF02833 DHHA2 domain IX91_06000 PF00005 ABC transporter IX91_06005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_06005 PF00005 ABC transporter IX91_06010 PF12911 N-terminal TM domain of oligopeptide transport permease C IX91_06010 PF00528 Binding-protein-dependent transport system inner membrane component IX91_06015 PF00528 Binding-protein-dependent transport system inner membrane component IX91_06020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_06025 PF00158 Sigma-54 interaction domain IX91_06025 PF02954 Bacterial regulatory protein, Fis family IX91_06030 PF04012 PspA/IM30 family IX91_06035 PF06667 Phage shock protein B IX91_06050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_06055 PF00873 AcrB/AcrD/AcrF family IX91_06060 PF03352 Methyladenine glycosylase IX91_06065 PF03280 Proteobacterial lipase chaperone protein IX91_06070 PF00561 alpha/beta hydrolase fold IX91_06075 PF01053 Cys/Met metabolism PLP-dependent enzyme IX91_06080 PF13396 Phospholipase_D-nuclease N-terminal IX91_06080 PF13091 PLD-like domain IX91_06085 PF00209 Sodium:neurotransmitter symporter family IX91_06090 PF12729 Four helix bundle sensory module for signal transduction IX91_06090 PF00672 HAMP domain IX91_06090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_06095 PF00849 RNA pseudouridylate synthase IX91_06100 PF10672 S-adenosylmethionine-dependent methyltransferase IX91_06100 PF17785 PUA-like domain IX91_06120 PF00263 Bacterial type II and III secretion system protein IX91_06120 PF04972 BON domain IX91_06120 PF13629 Pilus formation protein N terminal region IX91_06135 PF00437 Type II/IV secretion system protein IX91_06170 PF13488 Glycine zipper IX91_06170 PF00691 OmpA family IX91_06175 PF01066 CDP-alcohol phosphatidyltransferase IX91_06180 PF00005 ABC transporter IX91_06185 PF00528 Binding-protein-dependent transport system inner membrane component IX91_06190 PF13416 Bacterial extracellular solute-binding protein IX91_06200 PF06945 Protein of unknown function (DUF1289) IX91_06215 PF00563 EAL domain IX91_06215 PF12792 CSS motif domain associated with EAL IX91_06225 PF03795 YCII-related domain IX91_06230 PF03061 Thioesterase superfamily IX91_06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_06245 PF00072 Response regulator receiver domain IX91_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_06250 PF00072 Response regulator receiver domain IX91_06255 PF17327 Acyl homoserine lactone synthase IX91_06265 PF04269 Protein of unknown function, DUF440 IX91_06270 PF01132 Elongation factor P (EF-P) OB domain IX91_06270 PF08207 Elongation factor P (EF-P) KOW-like domain IX91_06270 PF09285 Elongation factor P, C-terminal IX91_06280 PF03104 DNA polymerase family B, exonuclease domain IX91_06280 PF00136 DNA polymerase family B IX91_06285 PF00196 Bacterial regulatory proteins, luxR family IX91_06285 PF00072 Response regulator receiver domain IX91_06290 PF01541 GIY-YIG catalytic domain IX91_06290 PF02151 UvrB/uvrC motif IX91_06290 PF08459 UvrC Helix-hairpin-helix N-terminal IX91_06295 PF01066 CDP-alcohol phosphatidyltransferase IX91_06320 PF17158 Membrane-associated sensor, integral membrane domain IX91_06320 PF00990 Diguanylate cyclase, GGDEF domain IX91_06325 PF07995 Glucose / Sorbosone dehydrogenase IX91_06355 PF00072 Response regulator receiver domain IX91_06355 PF00990 Diguanylate cyclase, GGDEF domain IX91_06360 PF03466 LysR substrate binding domain IX91_06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_06370 PF01409 tRNA synthetases class II core domain (F) IX91_06370 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IX91_06375 PF03484 tRNA synthetase B5 domain IX91_06375 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IX91_06375 PF03483 B3/4 domain IX91_06375 PF03147 Ferredoxin-fold anticodon binding domain IX91_06375 PF01588 Putative tRNA binding domain IX91_06380 PF00580 UvrD/REP helicase N-terminal domain IX91_06380 PF13361 UvrD-like helicase C-terminal domain IX91_06395 PF02653 Branched-chain amino acid transport system / permease component IX91_06400 PF02653 Branched-chain amino acid transport system / permease component IX91_06405 PF00005 ABC transporter IX91_06415 PF04198 Putative sugar-binding domain IX91_06420 PF00248 Aldo/keto reductase family IX91_06425 PF01266 FAD dependent oxidoreductase IX91_06425 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IX91_06430 PF01791 DeoC/LacD family aldolase IX91_06435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IX91_06435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IX91_06440 PF00465 Iron-containing alcohol dehydrogenase IX91_06445 PF00171 Aldehyde dehydrogenase family IX91_06450 PF03422 Carbohydrate binding module (family 6) IX91_06450 PF02412 Thrombospondin type 3 repeat IX91_06455 PF09339 IclR helix-turn-helix domain IX91_06455 PF01614 Bacterial transcriptional regulator IX91_06460 PF09339 IclR helix-turn-helix domain IX91_06460 PF01614 Bacterial transcriptional regulator IX91_06465 PF08450 SMP-30/Gluconolactonase/LRE-like region IX91_06475 PF02378 Phosphotransferase system, EIIC IX91_06475 PF00367 phosphotransferase system, EIIB IX91_06480 PF00356 Bacterial regulatory proteins, lacI family IX91_06485 PF00251 Glycosyl hydrolases family 32 N-terminal domain IX91_06485 PF08244 Glycosyl hydrolases family 32 C terminal IX91_06490 PF00294 pfkB family carbohydrate kinase IX91_06495 PF00356 Bacterial regulatory proteins, lacI family IX91_06495 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IX91_06505 PF01554 MatE IX91_06510 PF03466 LysR substrate binding domain IX91_06510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_06515 PF03577 Peptidase family C69 IX91_06520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IX91_06520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IX91_06530 PF00857 Isochorismatase family IX91_06545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_06585 PF08274 PhnA Zinc-Ribbon IX91_06585 PF03831 PhnA domain IX91_06590 PF13411 MerR HTH family regulatory protein IX91_06595 PF02627 Carboxymuconolactone decarboxylase family IX91_06610 PF00464 Serine hydroxymethyltransferase IX91_06615 PF01810 LysE type translocator IX91_06650 PF00795 Carbon-nitrogen hydrolase IX91_06675 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IX91_06680 PF01810 LysE type translocator IX91_06695 PF01235 Sodium:alanine symporter family IX91_06720 PF00990 Diguanylate cyclase, GGDEF domain IX91_06720 PF00563 EAL domain IX91_06720 PF03707 Bacterial signalling protein N terminal repeat IX91_06725 PF01546 Peptidase family M20/M25/M40 IX91_06725 PF07687 Peptidase dimerisation domain IX91_06730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_06735 PF04209 homogentisate 1,2-dioxygenase IX91_06745 PF14497 Glutathione S-transferase, C-terminal domain IX91_06745 PF02798 Glutathione S-transferase, N-terminal domain IX91_06750 PF00360 Phytochrome region IX91_06750 PF00563 EAL domain IX91_06750 PF01590 GAF domain IX91_06750 PF00990 Diguanylate cyclase, GGDEF domain IX91_06765 PF13488 Glycine zipper IX91_06765 PF00691 OmpA family IX91_06780 PF02913 FAD linked oxidases, C-terminal domain IX91_06780 PF01565 FAD binding domain IX91_06780 PF13183 4Fe-4S dicluster domain IX91_06785 PF04191 Phospholipid methyltransferase IX91_06795 PF01175 Urocanase Rossmann-like domain IX91_06795 PF17391 Urocanase N-terminal domain IX91_06795 PF17392 Urocanase C-terminal domain IX91_06800 PF00221 Aromatic amino acid lyase IX91_06805 PF00491 Arginase family IX91_06810 PF01979 Amidohydrolase family IX91_06815 PF00392 Bacterial regulatory proteins, gntR family IX91_06815 PF07702 UTRA domain IX91_06820 PF07070 SpoOM protein IX91_06840 PF02222 ATP-grasp domain IX91_06845 PF11871 Domain of unknown function (DUF3391) IX91_06845 PF01966 HD domain IX91_06850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX91_06850 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IX91_06855 PF04172 LrgB-like family IX91_06860 PF03788 LrgA family IX91_06865 PF08411 Exonuclease C-terminal IX91_06865 PF00929 Exonuclease IX91_06885 PF13460 NAD(P)H-binding IX91_06895 PF01613 Flavin reductase like domain IX91_06905 PF02654 Cobalamin-5-phosphate synthase IX91_06910 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IX91_06925 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IX91_06930 PF01032 FecCD transport family IX91_06945 PF00990 Diguanylate cyclase, GGDEF domain IX91_06960 PF03466 LysR substrate binding domain IX91_06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_06965 PF00005 ABC transporter IX91_06985 PF01863 Protein of unknown function DUF45 IX91_06990 PF05971 RNA methyltransferase IX91_07005 PF00561 alpha/beta hydrolase fold IX91_07030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_07030 PF08447 PAS fold IX91_07030 PF13426 PAS domain IX91_07040 PF01914 MarC family integral membrane protein IX91_07055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_07075 PF01970 Tripartite tricarboxylate transporter TctA family IX91_07140 PF07724 AAA domain (Cdc48 subfamily) IX91_07140 PF17871 AAA lid domain IX91_07140 PF10431 C-terminal, D2-small domain, of ClpB protein IX91_07140 PF00004 ATPase family associated with various cellular activities (AAA) IX91_07195 PF16671 Actin cross-linking domain IX91_07195 PF04717 Type VI secretion system, phage-baseplate injector IX91_07200 PF02225 PA domain IX91_07200 PF04389 Peptidase family M28 IX91_07220 PF00285 Citrate synthase, C-terminal domain IX91_07225 PF00330 Aconitase family (aconitate hydratase) IX91_07225 PF00694 Aconitase C-terminal domain IX91_07230 PF04303 PrpF protein IX91_07235 PF00501 AMP-binding enzyme IX91_07235 PF13193 AMP-binding enzyme C-terminal domain IX91_07235 PF16177 Acetyl-coenzyme A synthetase N-terminus IX91_07250 PF00672 HAMP domain IX91_07250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_07250 PF02743 Cache domain IX91_07260 PF04055 Radical SAM superfamily IX91_07265 PF06508 Queuosine biosynthesis protein QueC IX91_07270 PF00990 Diguanylate cyclase, GGDEF domain IX91_07270 PF17158 Membrane-associated sensor, integral membrane domain IX91_07280 PF05736 OprF membrane domain IX91_07280 PF00691 OmpA family IX91_07295 PF10672 S-adenosylmethionine-dependent methyltransferase IX91_07295 PF17785 PUA-like domain IX91_07300 PF02743 Cache domain IX91_07300 PF00672 HAMP domain IX91_07300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_07305 PF00708 Acylphosphatase IX91_07310 PF04358 DsrC like protein IX91_07315 PF01027 Inhibitor of apoptosis-promoting Bax1 IX91_07320 PF00005 ABC transporter IX91_07325 PF00528 Binding-protein-dependent transport system inner membrane component IX91_07330 PF00528 Binding-protein-dependent transport system inner membrane component IX91_07335 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_07340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX91_07340 PF10414 Sirohaem synthase dimerisation region IX91_07340 PF14824 Sirohaem biosynthesis protein central IX91_07345 PF04461 Protein of unknown function (DUF520) IX91_07350 PF00793 DAHP synthetase I family IX91_07375 PF02470 MlaD protein IX91_07380 PF04403 Paraquat-inducible protein A IX91_07385 PF00005 ABC transporter IX91_07385 PF00664 ABC transporter transmembrane region IX91_07390 PF13185 GAF domain IX91_07395 PF04352 ProQ/FINO family IX91_07395 PF17516 ProQ C-terminal domain IX91_07400 PF11818 C-terminal domain of tail specific protease (DUF3340) IX91_07400 PF00595 PDZ domain IX91_07400 PF03572 Peptidase family S41 IX91_07400 PF17804 Tail specific protease N-terminal domain IX91_07410 PF01433 Peptidase family M1 domain IX91_07410 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IX91_07410 PF11940 Domain of unknown function (DUF3458) Ig-like fold IX91_07420 PF05088 Bacterial NAD-glutamate dehydrogenase IX91_07425 PF01180 Dihydroorotate dehydrogenase IX91_07430 PF07126 Cell-division protein ZapC IX91_07435 PF10672 S-adenosylmethionine-dependent methyltransferase IX91_07435 PF01170 Putative RNA methylase family UPF0020 IX91_07435 PF02926 THUMP domain IX91_07445 PF16326 ABC transporter C-terminal domain IX91_07445 PF12848 ABC transporter IX91_07445 PF00005 ABC transporter IX91_07455 PF04957 Ribosome modulation factor IX91_07460 PF07977 FabA-like domain IX91_07465 PF05362 Lon protease (S16) C-terminal proteolytic domain IX91_07465 PF13654 AAA domain IX91_07470 PF17414 MatP C-terminal ribbon-helix-helix domain IX91_07470 PF06303 MatP N-terminal domain IX91_07500 PF08241 Methyltransferase domain IX91_07530 PF00115 Cytochrome C and Quinol oxidase polypeptide I IX91_07545 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IX91_07545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IX91_07555 PF00403 Heavy-metal-associated domain IX91_07570 PF00027 Cyclic nucleotide-binding domain IX91_07570 PF13545 Crp-like helix-turn-helix domain IX91_07575 PF00582 Universal stress protein family IX91_07580 PF01171 PP-loop family IX91_07590 PF01554 MatE IX91_07610 PF00005 ABC transporter IX91_07610 PF08402 TOBE domain IX91_07615 PF00528 Binding-protein-dependent transport system inner membrane component IX91_07620 PF00528 Binding-protein-dependent transport system inner membrane component IX91_07625 PF13416 Bacterial extracellular solute-binding protein IX91_07630 PF13416 Bacterial extracellular solute-binding protein IX91_07635 PF00563 EAL domain IX91_07635 PF00990 Diguanylate cyclase, GGDEF domain IX91_07635 PF03707 Bacterial signalling protein N terminal repeat IX91_07640 PF02146 Sir2 family IX91_07645 PF00909 Ammonium Transporter Family IX91_07660 PF13247 4Fe-4S dicluster domain IX91_07665 PF00384 Molybdopterin oxidoreductase IX91_07665 PF01568 Molydopterin dinucleotide binding domain IX91_07665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX91_07695 PF02634 FdhD/NarQ family IX91_07700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_07700 PF00672 HAMP domain IX91_07700 PF02743 Cache domain IX91_07705 PF08212 Lipocalin-like domain IX91_07745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX91_07745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX91_07755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_07840 PF13333 Integrase core domain IX91_07840 PF13276 HTH-like domain IX91_07840 PF00665 Integrase core domain IX91_07865 PF00106 short chain dehydrogenase IX91_07885 PF12848 ABC transporter IX91_07885 PF00005 ABC transporter IX91_07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_07895 PF00512 His Kinase A (phospho-acceptor) domain IX91_07900 PF00158 Sigma-54 interaction domain IX91_07900 PF00072 Response regulator receiver domain IX91_07900 PF02954 Bacterial regulatory protein, Fis family IX91_07905 PF12849 PBP superfamily domain IX91_07910 PF00528 Binding-protein-dependent transport system inner membrane component IX91_07915 PF08402 TOBE domain IX91_07915 PF00005 ABC transporter IX91_07920 PF12804 MobA-like NTP transferase domain IX91_07925 PF03453 MoeA N-terminal region (domain I and II) IX91_07925 PF00994 Probable molybdopterin binding domain IX91_07925 PF03454 MoeA C-terminal region (domain IV) IX91_07935 PF00480 ROK family IX91_07950 PF12729 Four helix bundle sensory module for signal transduction IX91_07950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_07950 PF00672 HAMP domain IX91_07955 PF00877 NlpC/P60 family IX91_07975 PF00677 Lumazine binding domain IX91_07980 PF01554 MatE IX91_07990 PF01740 STAS domain IX91_07995 PF01389 OmpA-like transmembrane domain IX91_07995 PF00691 OmpA family IX91_08015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX91_08015 PF00072 Response regulator receiver domain IX91_08015 PF01627 Hpt domain IX91_08015 PF00512 His Kinase A (phospho-acceptor) domain IX91_08015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_08015 PF00672 HAMP domain IX91_08020 PF02954 Bacterial regulatory protein, Fis family IX91_08020 PF00158 Sigma-54 interaction domain IX91_08020 PF00072 Response regulator receiver domain IX91_08030 PF13439 Glycosyltransferase Family 4 IX91_08030 PF00534 Glycosyl transferases group 1 IX91_08050 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_08050 PF12464 Maltose acetyltransferase IX91_08065 PF13579 Glycosyl transferase 4-like domain IX91_08065 PF00534 Glycosyl transferases group 1 IX91_08075 PF02397 Bacterial sugar transferase IX91_08100 PF00072 Response regulator receiver domain IX91_08100 PF00486 Transcriptional regulatory protein, C terminal IX91_08130 PF01212 Beta-eliminating lyase IX91_08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_08140 PF00512 His Kinase A (phospho-acceptor) domain IX91_08140 PF00072 Response regulator receiver domain IX91_08140 PF09456 RcsC Alpha-Beta-Loop (ABL) IX91_08145 PF00072 Response regulator receiver domain IX91_08145 PF00486 Transcriptional regulatory protein, C terminal IX91_08150 PF03222 Tryptophan/tyrosine permease family IX91_08155 PF02195 ParB-like nuclease domain IX91_08160 PF11922 Domain of unknown function (DUF3440) IX91_08160 PF01507 Phosphoadenosine phosphosulfate reductase family IX91_08190 PF14824 Sirohaem biosynthesis protein central IX91_08190 PF10414 Sirohaem synthase dimerisation region IX91_08190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX91_08195 PF01226 Formate/nitrite transporter IX91_08200 PF13806 Rieske-like [2Fe-2S] domain IX91_08205 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_08205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX91_08205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX91_08205 PF18267 Rubredoxin NAD+ reductase C-terminal domain IX91_08205 PF04324 BFD-like [2Fe-2S] binding domain IX91_08210 PF00672 HAMP domain IX91_08210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_08220 PF17151 Periplasmic sensor domain IX91_08220 PF00990 Diguanylate cyclase, GGDEF domain IX91_08240 PF12431 Transcriptional regulator IX91_08240 PF00072 Response regulator receiver domain IX91_08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_08245 PF00989 PAS fold IX91_08245 PF17203 Single cache domain 3 IX91_08245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IX91_08260 PF03544 Gram-negative bacterial TonB protein C-terminal IX91_08265 PF02472 Biopolymer transport protein ExbD/TolR IX91_08270 PF01618 MotA/TolQ/ExbB proton channel family IX91_08275 PF01618 MotA/TolQ/ExbB proton channel family IX91_08285 PF07715 TonB-dependent Receptor Plug Domain IX91_08285 PF00593 TonB dependent receptor IX91_08290 PF00672 HAMP domain IX91_08290 PF00512 His Kinase A (phospho-acceptor) domain IX91_08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_08290 PF16527 Two-component sensor protein CpxA, periplasmic domain IX91_08295 PF00486 Transcriptional regulatory protein, C terminal IX91_08295 PF00072 Response regulator receiver domain IX91_08315 PF03009 Glycerophosphoryl diester phosphodiesterase family IX91_08330 PF01259 SAICAR synthetase IX91_08335 PF00753 Metallo-beta-lactamase superfamily IX91_08350 PF04055 Radical SAM superfamily IX91_08355 PF11230 Protein of unknown function (DUF3029) IX91_08360 PF00672 HAMP domain IX91_08360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_08360 PF17200 Single Cache domain 2 IX91_08370 PF03989 DNA gyrase C-terminal domain, beta-propeller IX91_08370 PF00521 DNA gyrase/topoisomerase IV, subunit A IX91_08380 PF02867 Ribonucleotide reductase, barrel domain IX91_08380 PF00317 Ribonucleotide reductase, all-alpha domain IX91_08380 PF03477 ATP cone domain IX91_08385 PF00268 Ribonucleotide reductase, small chain IX91_08400 PF00994 Probable molybdopterin binding domain IX91_08415 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IX91_08420 PF16653 Saccharopine dehydrogenase C-terminal domain IX91_08420 PF03435 Saccharopine dehydrogenase NADP binding domain IX91_08425 PF00202 Aminotransferase class-III IX91_08440 PF02412 Thrombospondin type 3 repeat IX91_08440 PF03422 Carbohydrate binding module (family 6) IX91_08445 PF06965 Na+/H+ antiporter 1 IX91_08460 PF00005 ABC transporter IX91_08465 PF01554 MatE IX91_08470 PF11066 Protein of unknown function (DUF2867) IX91_08470 PF13460 NAD(P)H-binding IX91_08480 PF07690 Major Facilitator Superfamily IX91_08485 PF00849 RNA pseudouridylate synthase IX91_08485 PF01479 S4 domain IX91_08490 PF00271 Helicase conserved C-terminal domain IX91_08490 PF04851 Type III restriction enzyme, res subunit IX91_08500 PF00486 Transcriptional regulatory protein, C terminal IX91_08500 PF00072 Response regulator receiver domain IX91_08505 PF13755 Sensor N-terminal transmembrane domain IX91_08505 PF13756 Stimulus-sensing domain IX91_08505 PF00512 His Kinase A (phospho-acceptor) domain IX91_08505 PF00672 HAMP domain IX91_08505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_08520 PF18500 CadC C-terminal domain 1 IX91_08520 PF00486 Transcriptional regulatory protein, C terminal IX91_08525 PF00873 AcrB/AcrD/AcrF family IX91_08530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_08550 PF00535 Glycosyl transferase family 2 IX91_08555 PF01386 Ribosomal L25p family IX91_08560 PF03466 LysR substrate binding domain IX91_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_08565 PF17848 Acetyl-coA carboxylase zinc finger domain IX91_08565 PF01039 Carboxyl transferase domain IX91_08570 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IX91_08580 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX91_08580 PF07683 Cobalamin synthesis protein cobW C-terminal domain IX91_08585 PF00498 FHA domain IX91_08585 PF00990 Diguanylate cyclase, GGDEF domain IX91_08585 PF00563 EAL domain IX91_08590 PF00268 Ribonucleotide reductase, small chain IX91_08595 PF02867 Ribonucleotide reductase, barrel domain IX91_08595 PF08343 Ribonucleotide reductase N-terminal IX91_08595 PF00317 Ribonucleotide reductase, all-alpha domain IX91_08600 PF07972 NrdI Flavodoxin like IX91_08605 PF00462 Glutaredoxin IX91_08610 PF01521 Iron-sulphur cluster biosynthesis IX91_08615 PF01458 Uncharacterized protein family (UPF0051) IX91_08620 PF00005 ABC transporter IX91_08625 PF01458 Uncharacterized protein family (UPF0051) IX91_08630 PF00266 Aminotransferase class-V IX91_08635 PF02657 Fe-S metabolism associated domain IX91_08640 PF00127 Copper binding proteins, plastocyanin/azurin family IX91_08645 PF02743 Cache domain IX91_08645 PF00672 HAMP domain IX91_08645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_08650 PF00282 Pyridoxal-dependent decarboxylase conserved domain IX91_08655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_08660 PF14602 Hexapeptide repeat of succinyl-transferase IX91_08660 PF12464 Maltose acetyltransferase IX91_08665 PF14376 Haem-binding domain IX91_08665 PF00034 Cytochrome c IX91_08665 PF03150 Di-haem cytochrome c peroxidase IX91_08670 PF09308 LuxQ, periplasmic IX91_08670 PF00512 His Kinase A (phospho-acceptor) domain IX91_08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_08670 PF00072 Response regulator receiver domain IX91_08685 PF00892 EamA-like transporter family IX91_08690 PF13520 Amino acid permease IX91_08700 PF01734 Patatin-like phospholipase IX91_08720 PF00196 Bacterial regulatory proteins, luxR family IX91_08720 PF00072 Response regulator receiver domain IX91_08725 PF17200 Single Cache domain 2 IX91_08725 PF07730 Histidine kinase IX91_08730 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX91_08740 PF03480 Bacterial extracellular solute-binding protein, family 7 IX91_08755 PF00753 Metallo-beta-lactamase superfamily IX91_08760 PF05951 Bacterial protein of unknown function (DUF882) IX91_08765 PF01471 Putative peptidoglycan binding domain IX91_08765 PF03734 L,D-transpeptidase catalytic domain IX91_08790 PF00925 GTP cyclohydrolase II IX91_08800 PF00990 Diguanylate cyclase, GGDEF domain IX91_08815 PF13302 Acetyltransferase (GNAT) domain IX91_08820 PF00158 Sigma-54 interaction domain IX91_08820 PF18024 Helix-turn-helix domain IX91_08825 PF05128 Domain of unknown function (DUF697) IX91_08830 PF04317 YcjX-like family, DUF463 IX91_08845 PF04715 Anthranilate synthase component I, N terminal region IX91_08845 PF00425 chorismate binding enzyme IX91_08855 PF00512 His Kinase A (phospho-acceptor) domain IX91_08855 PF09308 LuxQ, periplasmic IX91_08855 PF00072 Response regulator receiver domain IX91_08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_08865 PF00293 NUDIX domain IX91_08870 PF03222 Tryptophan/tyrosine permease family IX91_08875 PF03313 Serine dehydratase alpha chain IX91_08875 PF03315 Serine dehydratase beta chain IX91_08885 PF04231 Endonuclease I IX91_08890 PF03222 Tryptophan/tyrosine permease family IX91_08900 PF01740 STAS domain IX91_08900 PF00916 Sulfate permease family IX91_08910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_08910 PF00672 HAMP domain IX91_08910 PF12729 Four helix bundle sensory module for signal transduction IX91_08915 PF00152 tRNA synthetases class II (D, K and N) IX91_08915 PF01336 OB-fold nucleic acid binding domain IX91_08925 PF00155 Aminotransferase class I and II IX91_08925 PF00392 Bacterial regulatory proteins, gntR family IX91_08935 PF01966 HD domain IX91_08935 PF00672 HAMP domain IX91_08940 PF00155 Aminotransferase class I and II IX91_08955 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IX91_08955 PF04408 Helicase associated domain (HA2) IX91_08955 PF00271 Helicase conserved C-terminal domain IX91_08955 PF11898 Domain of unknown function (DUF3418) IX91_08955 PF00270 DEAD/DEAH box helicase IX91_08960 PF00390 Malic enzyme, N-terminal domain IX91_08960 PF03949 Malic enzyme, NAD binding domain IX91_08970 PF02698 DUF218 domain IX91_08975 PF00990 Diguanylate cyclase, GGDEF domain IX91_08975 PF07694 5TMR of 5TMR-LYT IX91_08985 PF00266 Aminotransferase class-V IX91_08995 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_09000 PF00005 ABC transporter IX91_09000 PF00664 ABC transporter transmembrane region IX91_09005 PF00005 ABC transporter IX91_09005 PF00664 ABC transporter transmembrane region IX91_09010 PF00849 RNA pseudouridylate synthase IX91_09010 PF01479 S4 domain IX91_09015 PF01300 Telomere recombination IX91_09020 PF02811 PHP domain IX91_09025 PF08056 Tryptophan operon leader peptide IX91_09030 PF00425 chorismate binding enzyme IX91_09030 PF04715 Anthranilate synthase component I, N terminal region IX91_09035 PF00117 Glutamine amidotransferase class-I IX91_09040 PF02885 Glycosyl transferase family, helical bundle domain IX91_09040 PF00591 Glycosyl transferase family, a/b domain IX91_09045 PF00218 Indole-3-glycerol phosphate synthase IX91_09045 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IX91_09050 PF00291 Pyridoxal-phosphate dependent enzyme IX91_09055 PF00290 Tryptophan synthase alpha chain IX91_09060 PF00375 Sodium:dicarboxylate symporter family IX91_09070 PF00005 ABC transporter IX91_09070 PF00664 ABC transporter transmembrane region IX91_09080 PF11898 Domain of unknown function (DUF3418) IX91_09080 PF00270 DEAD/DEAH box helicase IX91_09080 PF04408 Helicase associated domain (HA2) IX91_09080 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IX91_09080 PF00271 Helicase conserved C-terminal domain IX91_09115 PF00990 Diguanylate cyclase, GGDEF domain IX91_09115 PF08448 PAS fold IX91_09125 PF00012 Hsp70 protein IX91_09130 PF00012 Hsp70 protein IX91_09155 PF07720 Tetratricopeptide repeat IX91_09160 PF04792 V antigen (LcrV) protein IX91_09175 PF00771 FHIPEP family IX91_09195 PF09059 TyeA IX91_09200 PF07201 HrpJ-like domain IX91_09205 PF18269 T3SS EscN ATPase C-terminal domain IX91_09205 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX91_09205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX91_09220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IX91_09225 PF00813 FliP family IX91_09230 PF01313 Bacterial export proteins, family 3 IX91_09235 PF01311 Bacterial export proteins, family 1 IX91_09240 PF01312 FlhB HrpN YscU SpaS Family IX91_09265 PF02108 Flagellar assembly protein FliH IX91_09275 PF01514 Secretory protein of YscJ/FliF family IX91_09280 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI IX91_09290 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) IX91_09295 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF IX91_09325 PF12833 Helix-turn-helix domain IX91_09350 PF00892 EamA-like transporter family IX91_09360 PF01810 LysE type translocator IX91_09375 PF01323 DSBA-like thioredoxin domain IX91_09385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX91_09385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX91_09395 PF03466 LysR substrate binding domain IX91_09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_09405 PF13302 Acetyltransferase (GNAT) domain IX91_09410 PF01047 MarR family IX91_09415 PF02566 OsmC-like protein IX91_09420 PF01717 Cobalamin-independent synthase, Catalytic domain IX91_09420 PF08267 Cobalamin-independent synthase, N-terminal domain IX91_09430 PF13006 Insertion element 4 transposase N-terminal IX91_09430 PF01609 Transposase DDE domain IX91_09445 PF00990 Diguanylate cyclase, GGDEF domain IX91_09445 PF03707 Bacterial signalling protein N terminal repeat IX91_09445 PF00563 EAL domain IX91_09450 PF03707 Bacterial signalling protein N terminal repeat IX91_09450 PF00990 Diguanylate cyclase, GGDEF domain IX91_09450 PF00563 EAL domain IX91_09455 PF11842 Domain of unknown function (DUF3362) IX91_09455 PF04055 Radical SAM superfamily IX91_09455 PF08497 Radical SAM N-terminal IX91_09460 PF00266 Aminotransferase class-V IX91_09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_09470 PF00512 His Kinase A (phospho-acceptor) domain IX91_09470 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_09485 PF04994 TfoX C-terminal domain IX91_09485 PF04993 TfoX N-terminal domain IX91_09495 PF03956 Lysine exporter LysO IX91_09505 PF00282 Pyridoxal-dependent decarboxylase conserved domain IX91_09510 PF01380 SIS domain IX91_09510 PF01418 Helix-turn-helix domain, rpiR family IX91_09515 PF00171 Aldehyde dehydrogenase family IX91_09515 PF00465 Iron-containing alcohol dehydrogenase IX91_09520 PF00462 Glutaredoxin IX91_09525 PF06826 Predicted Permease Membrane Region IX91_09525 PF02080 TrkA-C domain IX91_09530 PF00528 Binding-protein-dependent transport system inner membrane component IX91_09535 PF00528 Binding-protein-dependent transport system inner membrane component IX91_09540 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_09545 PF00005 ABC transporter IX91_09555 PF01228 Glycine radical IX91_09555 PF02901 Pyruvate formate lyase-like IX91_09565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_09565 PF00672 HAMP domain IX91_09570 PF04055 Radical SAM superfamily IX91_09585 PF02743 Cache domain IX91_09585 PF00672 HAMP domain IX91_09585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_09595 PF08298 PrkA AAA domain IX91_09595 PF06798 PrkA serine protein kinase C-terminal domain IX91_09600 PF04285 Protein of unknown function (DUF444) IX91_09605 PF04293 SpoVR like protein IX91_09610 PF02348 Cytidylyltransferase IX91_09620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IX91_09625 PF00005 ABC transporter IX91_09625 PF00664 ABC transporter transmembrane region IX91_09630 PF00753 Metallo-beta-lactamase superfamily IX91_09630 PF03772 Competence protein IX91_09630 PF13567 Domain of unknown function (DUF4131) IX91_09655 PF12704 MacB-like periplasmic core domain IX91_09655 PF02687 FtsX-like permease family IX91_09660 PF00005 ABC transporter IX91_09665 PF12704 MacB-like periplasmic core domain IX91_09665 PF02687 FtsX-like permease family IX91_09675 PF03461 TRCF domain IX91_09675 PF17757 UvrB interaction domain IX91_09675 PF02559 CarD-like/TRCF domain IX91_09675 PF00270 DEAD/DEAH box helicase IX91_09675 PF00271 Helicase conserved C-terminal domain IX91_09685 PF13302 Acetyltransferase (GNAT) domain IX91_09690 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_09695 PF05728 Uncharacterised protein family (UPF0227) IX91_09705 PF13036 Peptidoglycan-synthase activator LpoB IX91_09705 PF08139 Prokaryotic membrane lipoprotein lipid attachment site IX91_09720 PF01230 HIT domain IX91_09725 PF00672 HAMP domain IX91_09725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_09735 PF07840 FadR C-terminal domain IX91_09735 PF00392 Bacterial regulatory proteins, gntR family IX91_09740 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IX91_09745 PF02600 Disulfide bond formation protein DsbB IX91_09755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IX91_09755 PF17854 FtsK alpha domain IX91_09755 PF09397 Ftsk gamma domain IX91_09755 PF01580 FtsK/SpoIIIE family IX91_09760 PF01037 Lrp/AsnC ligand binding domain IX91_09765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IX91_09765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IX91_09770 PF04217 Protein of unknown function, DUF412 IX91_09775 PF00871 Acetokinase family IX91_09780 PF01515 Phosphate acetyl/butaryl transferase IX91_09780 PF07085 DRTGG domain IX91_09785 PF00990 Diguanylate cyclase, GGDEF domain IX91_09790 PF13409 Glutathione S-transferase, N-terminal domain IX91_09795 PF00005 ABC transporter IX91_09795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_09800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_09800 PF00005 ABC transporter IX91_09805 PF00528 Binding-protein-dependent transport system inner membrane component IX91_09805 PF12911 N-terminal TM domain of oligopeptide transport permease C IX91_09810 PF00528 Binding-protein-dependent transport system inner membrane component IX91_09815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_09825 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IX91_09840 PF00005 ABC transporter IX91_09840 PF02687 FtsX-like permease family IX91_09840 PF12704 MacB-like periplasmic core domain IX91_09845 PF12704 MacB-like periplasmic core domain IX91_09845 PF00005 ABC transporter IX91_09845 PF02687 FtsX-like permease family IX91_09850 PF02687 FtsX-like permease family IX91_09850 PF12704 MacB-like periplasmic core domain IX91_09860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_09870 PF00873 AcrB/AcrD/AcrF family IX91_09905 PF03466 LysR substrate binding domain IX91_09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_09910 PF00990 Diguanylate cyclase, GGDEF domain IX91_09920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IX91_09925 PF09619 Type III secretion system lipoprotein chaperone (YscW) IX91_09940 PF01037 Lrp/AsnC ligand binding domain IX91_09940 PF13404 AsnC-type helix-turn-helix domain IX91_09945 PF00291 Pyridoxal-phosphate dependent enzyme IX91_09965 PF07690 Major Facilitator Superfamily IX91_09970 PF03601 Conserved hypothetical protein 698 IX91_09980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_09980 PF03466 LysR substrate binding domain IX91_09985 PF02378 Phosphotransferase system, EIIC IX91_09985 PF00367 phosphotransferase system, EIIB IX91_09985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IX91_09990 PF13193 AMP-binding enzyme C-terminal domain IX91_09990 PF00501 AMP-binding enzyme IX91_09995 PF13378 Enolase C-terminal domain-like IX91_10000 PF00378 Enoyl-CoA hydratase/isomerase IX91_10005 PF12697 Alpha/beta hydrolase family IX91_10010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX91_10010 PF16582 Middle domain of thiamine pyrophosphate IX91_10010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX91_10015 PF00425 chorismate binding enzyme IX91_10020 PF00155 Aminotransferase class I and II IX91_10030 PF03466 LysR substrate binding domain IX91_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_10035 PF13533 Biotin-lipoyl like IX91_10040 PF07690 Major Facilitator Superfamily IX91_10045 PF01966 HD domain IX91_10045 PF13286 Phosphohydrolase-associated domain IX91_10050 PF00962 Adenosine/AMP deaminase IX91_10065 PF00271 Helicase conserved C-terminal domain IX91_10065 PF00270 DEAD/DEAH box helicase IX91_10070 PF00392 Bacterial regulatory proteins, gntR family IX91_10070 PF07702 UTRA domain IX91_10075 PF13378 Enolase C-terminal domain-like IX91_10075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IX91_10080 PF02378 Phosphotransferase system, EIIC IX91_10080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IX91_10080 PF00367 phosphotransferase system, EIIB IX91_10085 PF00294 pfkB family carbohydrate kinase IX91_10090 PF01081 KDPG and KHG aldolase IX91_10095 PF08496 Peptidase family S49 N-terminal IX91_10095 PF01343 Peptidase family S49 IX91_10100 PF00106 short chain dehydrogenase IX91_10115 PF07733 Bacterial DNA polymerase III alpha NTPase domain IX91_10115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IX91_10115 PF01336 OB-fold nucleic acid binding domain IX91_10115 PF14579 Helix-hairpin-helix motif IX91_10115 PF02811 PHP domain IX91_10120 PF00072 Response regulator receiver domain IX91_10120 PF01584 CheW-like domain IX91_10125 PF00480 ROK family IX91_10135 PF00224 Pyruvate kinase, barrel domain IX91_10135 PF02887 Pyruvate kinase, alpha/beta domain IX91_10140 PF01734 Patatin-like phospholipase IX91_10165 PF02378 Phosphotransferase system, EIIC IX91_10165 PF00367 phosphotransferase system, EIIB IX91_10170 PF01026 TatD related DNase IX91_10175 PF09115 DNA polymerase III, delta subunit, C terminal IX91_10180 PF02223 Thymidylate kinase IX91_10185 PF02618 YceG-like family IX91_10190 PF01063 Amino-transferase class IV IX91_10195 PF00109 Beta-ketoacyl synthase, N-terminal domain IX91_10195 PF02801 Beta-ketoacyl synthase, C-terminal domain IX91_10200 PF00550 Phosphopantetheine attachment site IX91_10210 PF00698 Acyl transferase domain IX91_10215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IX91_10215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IX91_10220 PF02504 Fatty acid synthesis protein IX91_10230 PF02620 Large ribosomal RNA subunit accumulation protein YceD IX91_10235 PF02545 Maf-like protein IX91_10240 PF01479 S4 domain IX91_10240 PF00849 RNA pseudouridylate synthase IX91_10245 PF00575 S1 RNA binding domain IX91_10245 PF10150 Ribonuclease E/G family IX91_10245 PF12111 Polyribonucleotide phosphorylase C terminal IX91_10250 PF00916 Sulfate permease family IX91_10250 PF01740 STAS domain IX91_10255 PF01612 3'-5' exonuclease IX91_10255 PF00570 HRDC domain IX91_10260 PF00501 AMP-binding enzyme IX91_10260 PF13193 AMP-binding enzyme C-terminal domain IX91_10265 PF00561 alpha/beta hydrolase fold IX91_10270 PF03843 Outer membrane lipoprotein Slp family IX91_10280 PF00814 Glycoprotease family IX91_10285 PF13307 Helicase C-terminal domain IX91_10285 PF04851 Type III restriction enzyme, res subunit IX91_10295 PF00551 Formyl transferase IX91_10295 PF01842 ACT domain IX91_10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_10300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX91_10305 PF01343 Peptidase family S49 IX91_10320 PF00083 Sugar (and other) transporter IX91_10325 PF00710 Asparaginase, N-terminal IX91_10325 PF17763 Glutaminase/Asparaginase C-terminal domain IX91_10335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IX91_10340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX91_10340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX91_10345 PF01925 Sulfite exporter TauE/SafE IX91_10350 PF04389 Peptidase family M28 IX91_10350 PF04151 Bacterial pre-peptidase C-terminal domain IX91_10355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX91_10355 PF02403 Seryl-tRNA synthetase N-terminal domain IX91_10365 PF12002 MgsA AAA+ ATPase C terminal IX91_10365 PF16193 AAA C-terminal domain IX91_10365 PF00004 ATPase family associated with various cellular activities (AAA) IX91_10370 PF03548 Outer membrane lipoprotein carrier protein LolA IX91_10375 PF02810 SEC-C motif IX91_10375 PF03695 Uncharacterised protein family (UPF0149) IX91_10380 PF07963 Prokaryotic N-terminal methylation motif IX91_10380 PF08334 Type II secretion system (T2SS), protein G IX91_10385 PF01207 Dihydrouridine synthase (Dus) IX91_10390 PF00990 Diguanylate cyclase, GGDEF domain IX91_10395 PF00005 ABC transporter IX91_10400 PF02653 Branched-chain amino acid transport system / permease component IX91_10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_10415 PF03466 LysR substrate binding domain IX91_10425 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IX91_10430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IX91_10435 PF18073 Rubredoxin metal binding domain IX91_10440 PF06305 Lipopolysaccharide assembly protein A domain IX91_10445 PF00216 Bacterial DNA-binding protein IX91_10455 PF00575 S1 RNA binding domain IX91_10460 PF02224 Cytidylate kinase IX91_10470 PF13145 PPIC-type PPIASE domain IX91_10475 PF00216 Bacterial DNA-binding protein IX91_10480 PF05362 Lon protease (S16) C-terminal proteolytic domain IX91_10480 PF02190 ATP-dependent protease La (LON) substrate-binding domain IX91_10480 PF00004 ATPase family associated with various cellular activities (AAA) IX91_10485 PF06689 ClpX C4-type zinc finger IX91_10485 PF07724 AAA domain (Cdc48 subfamily) IX91_10485 PF10431 C-terminal, D2-small domain, of ClpB protein IX91_10490 PF00574 Clp protease IX91_10495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX91_10495 PF05697 Bacterial trigger factor protein (TF) IX91_10495 PF05698 Bacterial trigger factor protein (TF) C-terminus IX91_10500 PF02743 Cache domain IX91_10500 PF00512 His Kinase A (phospho-acceptor) domain IX91_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_10505 PF00158 Sigma-54 interaction domain IX91_10505 PF00072 Response regulator receiver domain IX91_10505 PF02954 Bacterial regulatory protein, Fis family IX91_10510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX91_10515 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IX91_10520 PF03480 Bacterial extracellular solute-binding protein, family 7 IX91_10525 PF00005 ABC transporter IX91_10525 PF17912 MalK OB fold domain IX91_10525 PF03459 TOBE domain IX91_10530 PF00528 Binding-protein-dependent transport system inner membrane component IX91_10540 PF01547 Bacterial extracellular solute-binding protein IX91_10545 PF00512 His Kinase A (phospho-acceptor) domain IX91_10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_10545 PF00672 HAMP domain IX91_10550 PF00072 Response regulator receiver domain IX91_10550 PF00486 Transcriptional regulatory protein, C terminal IX91_10560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_10560 PF12729 Four helix bundle sensory module for signal transduction IX91_10560 PF00672 HAMP domain IX91_10565 PF17945 Beta/Gamma crystallin IX91_10565 PF12561 ToxR activated gene A lipoprotein domain IX91_10585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IX91_10585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IX91_10590 PF07662 Na+ dependent nucleoside transporter C-terminus IX91_10590 PF01773 Na+ dependent nucleoside transporter N-terminus IX91_10590 PF07670 Nucleoside recognition IX91_10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_10595 PF03466 LysR substrate binding domain IX91_10600 PF13406 Transglycosylase SLT domain IX91_10605 PF05166 YcgL domain IX91_10615 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX91_10620 PF03776 Septum formation topological specificity factor MinE IX91_10625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_10625 PF00672 HAMP domain IX91_10630 PF00171 Aldehyde dehydrogenase family IX91_10630 PF00465 Iron-containing alcohol dehydrogenase IX91_10635 PF01914 MarC family integral membrane protein IX91_10640 PF00520 Ion transport protein IX91_10640 PF00027 Cyclic nucleotide-binding domain IX91_10650 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX91_10650 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX91_10655 PF03553 Na+/H+ antiporter family IX91_10670 PF04245 37-kD nucleoid-associated bacterial protein IX91_10675 PF07208 Protein of unknown function (DUF1414) IX91_10680 PF11893 Domain of unknown function (DUF3413) IX91_10680 PF00884 Sulfatase IX91_10695 PF00293 NUDIX domain IX91_10700 PF00850 Histone deacetylase domain IX91_10710 PF02264 LamB porin IX91_10715 PF00356 Bacterial regulatory proteins, lacI family IX91_10725 PF00528 Binding-protein-dependent transport system inner membrane component IX91_10730 PF00528 Binding-protein-dependent transport system inner membrane component IX91_10735 PF00232 Glycosyl hydrolase family 1 IX91_10740 PF00005 ABC transporter IX91_10740 PF08402 TOBE domain IX91_10745 PF00356 Bacterial regulatory proteins, lacI family IX91_10750 PF00106 short chain dehydrogenase IX91_10755 PF01161 Phosphatidylethanolamine-binding protein IX91_10770 PF01751 Toprim domain IX91_10770 PF01131 DNA topoisomerase IX91_10775 PF00462 Glutaredoxin IX91_10780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IX91_10780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IX91_10795 PF01451 Low molecular weight phosphotyrosine protein phosphatase IX91_10800 PF12557 Cob(I)alamin adenosyltransferase N terminal IX91_10800 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IX91_10815 PF00485 Phosphoribulokinase / Uridine kinase family IX91_10820 PF10609 NUBPL iron-transfer P-loop NTPase IX91_10825 PF09334 tRNA synthetases class I (M) IX91_10825 PF01588 Putative tRNA binding domain IX91_10840 PF01048 Phosphorylase superfamily IX91_10845 PF00403 Heavy-metal-associated domain IX91_10850 PF01554 MatE IX91_10855 PF03061 Thioesterase superfamily IX91_10855 PF07085 DRTGG domain IX91_10855 PF00392 Bacterial regulatory proteins, gntR family IX91_10855 PF00571 CBS domain IX91_10865 PF00990 Diguanylate cyclase, GGDEF domain IX91_10870 PF02391 MoaE protein IX91_10875 PF02597 ThiS family IX91_10880 PF01967 MoaC family IX91_10885 PF00994 Probable molybdopterin binding domain IX91_10890 PF04055 Radical SAM superfamily IX91_10890 PF06463 Molybdenum Cofactor Synthesis C IX91_10895 PF01933 Uncharacterised protein family UPF0052 IX91_10900 PF01627 Hpt domain IX91_10905 PF00072 Response regulator receiver domain IX91_10905 PF02954 Bacterial regulatory protein, Fis family IX91_10905 PF00158 Sigma-54 interaction domain IX91_10910 PF00271 Helicase conserved C-terminal domain IX91_10910 PF04851 Type III restriction enzyme, res subunit IX91_10910 PF02151 UvrB/uvrC motif IX91_10910 PF12344 Ultra-violet resistance protein B IX91_10910 PF17757 UvrB interaction domain IX91_10945 PF02508 Rnf-Nqr subunit, membrane protein IX91_10950 PF04060 Putative Fe-S cluster IX91_10955 PF10531 SLBB domain IX91_10955 PF12838 4Fe-4S dicluster domain IX91_10955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IX91_10955 PF13375 RnfC Barrel sandwich hybrid domain IX91_10960 PF03116 NQR2, RnfD, RnfE family IX91_10965 PF04205 FMN-binding domain IX91_10970 PF02508 Rnf-Nqr subunit, membrane protein IX91_10975 PF00730 HhH-GPD superfamily base excision DNA repair protein IX91_10975 PF00633 Helix-hairpin-helix motif IX91_10975 PF10576 Iron-sulfur binding domain of endonuclease III IX91_10980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_10985 PF10952 Protein of unknown function (DUF2753) IX91_10990 PF00691 OmpA family IX91_10990 PF18393 MotY N-terminal domain IX91_10995 PF00929 Exonuclease IX91_11000 PF13726 Na+-H+ antiporter family IX91_11000 PF03553 Na+/H+ antiporter family IX91_11010 PF00701 Dihydrodipicolinate synthetase family IX91_11015 PF01842 ACT domain IX91_11020 PF00578 AhpC/TSA family IX91_11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_11025 PF02743 Cache domain IX91_11025 PF00672 HAMP domain IX91_11030 PF01594 AI-2E family transporter IX91_11040 PF01435 Peptidase family M48 IX91_11040 PF13181 Tetratricopeptide repeat IX91_11045 PF03960 ArsC family IX91_11050 PF03358 NADPH-dependent FMN reductase IX91_11060 PF04205 FMN-binding domain IX91_11060 PF12801 4Fe-4S binding domain IX91_11065 PF18764 Nitrous oxide reductase propeller repeat IX91_11065 PF18793 Nitrous oxide reductase propeller repeat 2 IX91_11070 PF05048 Periplasmic copper-binding protein (NosD) IX91_11075 PF00005 ABC transporter IX91_11080 PF12679 ABC-2 family transporter protein IX91_11085 PF05573 NosL IX91_11095 PF00860 Permease family IX91_11100 PF04073 Aminoacyl-tRNA editing domain IX91_11105 PF02872 5'-nucleotidase, C-terminal domain IX91_11105 PF00149 Calcineurin-like phosphoesterase IX91_11110 PF00793 DAHP synthetase I family IX91_11115 PF13369 Transglutaminase-like superfamily IX91_11120 PF04247 Invasion gene expression up-regulator, SirB IX91_11125 PF17827 PrmC N-terminal domain IX91_11125 PF13847 Methyltransferase domain IX91_11130 PF03462 PCRF domain IX91_11130 PF00472 RF-1 domain IX91_11140 PF03550 Outer membrane lipoprotein LolB IX91_11150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IX91_11150 PF14572 Phosphoribosyl synthetase-associated domain IX91_11155 PF01195 Peptidyl-tRNA hydrolase IX91_11160 PF06071 Protein of unknown function (DUF933) IX91_11160 PF01926 50S ribosome-binding GTPase IX91_11265 PF07196 Flagellin hook IN motif IX91_11265 PF00669 Bacterial flagellin N-terminal helical region IX91_11265 PF00700 Bacterial flagellin C-terminal helical region IX91_11270 PF00669 Bacterial flagellin N-terminal helical region IX91_11270 PF07196 Flagellin hook IN motif IX91_11270 PF00700 Bacterial flagellin C-terminal helical region IX91_11275 PF00669 Bacterial flagellin N-terminal helical region IX91_11275 PF00700 Bacterial flagellin C-terminal helical region IX91_11280 PF07196 Flagellin hook IN motif IX91_11280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX91_11290 PF10135 Rod binding protein IX91_11290 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IX91_11300 PF02107 Flagellar L-ring protein IX91_11305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX91_11305 PF00460 Flagella basal body rod protein IX91_11310 PF00460 Flagella basal body rod protein IX91_11310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX91_11315 PF07559 Flagellar basal body protein FlaE IX91_11315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX91_11315 PF00460 Flagella basal body rod protein IX91_11320 PF13861 FlgD Tudor-like domain IX91_11320 PF13860 FlgD Ig-like domain IX91_11320 PF03963 Flagellar hook capping protein - N-terminal region IX91_11325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IX91_11325 PF00460 Flagella basal body rod protein IX91_11330 PF00460 Flagella basal body rod protein IX91_11335 PF03705 CheR methyltransferase, all-alpha domain IX91_11335 PF01739 CheR methyltransferase, SAM binding domain IX91_11340 PF01584 CheW-like domain IX91_11340 PF00072 Response regulator receiver domain IX91_11350 PF04316 Anti-sigma-28 factor, FlgM IX91_11385 PF13488 Glycine zipper IX91_11385 PF00691 OmpA family IX91_11390 PF01389 OmpA-like transmembrane domain IX91_11390 PF00691 OmpA family IX91_11395 PF00749 tRNA synthetases class I (E and Q), catalytic domain IX91_11405 PF13609 Gram-negative porin IX91_11410 PF00403 Heavy-metal-associated domain IX91_11435 PF00762 Ferrochelatase IX91_11440 PF05191 Adenylate kinase, active site lid IX91_11445 PF00183 Hsp90 protein IX91_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_11450 PF00486 Transcriptional regulatory protein, C terminal IX91_11455 PF17323 Trans-membrane regulatory protein ToxS IX91_11470 PF12850 Calcineurin-like phosphoesterase superfamily domain IX91_11485 PF07556 Protein of unknown function (DUF1538) IX91_11490 PF07556 Protein of unknown function (DUF1538) IX91_11495 PF08338 Domain of unknown function (DUF1731) IX91_11495 PF01370 NAD dependent epimerase/dehydratase family IX91_11500 PF00106 short chain dehydrogenase IX91_11505 PF00085 Thioredoxin IX91_11510 PF16200 C-terminal region of band_7 IX91_11510 PF01145 SPFH domain / Band 7 family IX91_11525 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IX91_11530 PF13609 Gram-negative porin IX91_11540 PF04354 ZipA, C-terminal FtsZ-binding domain IX91_11550 PF00291 Pyridoxal-phosphate dependent enzyme IX91_11555 PF00381 PTS HPr component phosphorylation site IX91_11560 PF02896 PEP-utilising enzyme, TIM barrel domain IX91_11560 PF00391 PEP-utilising enzyme, mobile domain IX91_11560 PF05524 PEP-utilising enzyme, N-terminal IX91_11565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IX91_11570 PF01494 FAD binding domain IX91_11575 PF01938 TRAM domain IX91_11575 PF00919 Uncharacterized protein family UPF0004 IX91_11575 PF04055 Radical SAM superfamily IX91_11580 PF02562 PhoH-like protein IX91_11585 PF02130 Uncharacterized protein family UPF0054 IX91_11590 PF03471 Transporter associated domain IX91_11590 PF00571 CBS domain IX91_11595 PF00795 Carbon-nitrogen hydrolase IX91_11600 PF07295 Zinc-ribbon containing domain IX91_11605 PF00133 tRNA synthetases class I (I, L, M and V) IX91_11605 PF08264 Anticodon-binding domain of tRNA IX91_11605 PF13603 Leucyl-tRNA synthetase, Domain 2 IX91_11610 PF04390 Lipopolysaccharide-assembly IX91_11615 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IX91_11615 PF06144 DNA polymerase III, delta subunit IX91_11625 PF02590 Predicted SPOUT methyltransferase IX91_11630 PF00905 Penicillin binding protein transpeptidase domain IX91_11630 PF03717 Penicillin-binding Protein dimerisation domain IX91_11635 PF01098 Cell cycle protein IX91_11640 PF05036 Sporulation related domain IX91_11640 PF03330 Lytic transglycolase IX91_11645 PF00768 D-alanyl-D-alanine carboxypeptidase IX91_11645 PF07943 Penicillin-binding protein 5, C-terminal domain IX91_11650 PF04359 Protein of unknown function (DUF493) IX91_11655 PF03099 Biotin/lipoate A/B protein ligase family IX91_11660 PF04055 Radical SAM superfamily IX91_11660 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IX91_11670 PF00464 Serine hydroxymethyltransferase IX91_11680 PF00873 AcrB/AcrD/AcrF family IX91_11710 PF00128 Alpha amylase, catalytic domain IX91_11710 PF16657 Maltogenic Amylase, C-terminal domain IX91_11715 PF02378 Phosphotransferase system, EIIC IX91_11715 PF00367 phosphotransferase system, EIIB IX91_11720 PF00356 Bacterial regulatory proteins, lacI family IX91_11735 PF00005 ABC transporter IX91_11735 PF09383 NIL domain IX91_11740 PF00528 Binding-protein-dependent transport system inner membrane component IX91_11745 PF03180 NLPA lipoprotein IX91_11755 PF03806 AbgT putative transporter family IX91_11765 PF18389 TrmO C-terminal domain IX91_11765 PF01980 tRNA-methyltransferase O IX91_11770 PF03129 Anticodon binding domain IX91_11770 PF04073 Aminoacyl-tRNA editing domain IX91_11770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX91_11780 PF13230 Glutamine amidotransferases class-II IX91_11785 PF13580 SIS domain IX91_11790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX91_11790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX91_11790 PF09317 Domain of unknown function (DUF1974) IX91_11800 PF00929 Exonuclease IX91_11805 PF00075 RNase H IX91_11810 PF08241 Methyltransferase domain IX91_11820 PF01476 LysM domain IX91_11820 PF01464 Transglycosylase SLT domain IX91_11830 PF03372 Endonuclease/Exonuclease/phosphatase family IX91_11835 PF00543 Nitrogen regulatory protein P-II IX91_11840 PF00034 Cytochrome c IX91_11845 PF09179 TilS substrate binding domain IX91_11845 PF01171 PP-loop family IX91_11845 PF11734 TilS substrate C-terminal domain IX91_11850 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IX91_11855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IX91_11855 PF14579 Helix-hairpin-helix motif IX91_11855 PF02811 PHP domain IX91_11855 PF07733 Bacterial DNA polymerase III alpha NTPase domain IX91_11855 PF01336 OB-fold nucleic acid binding domain IX91_11860 PF01351 Ribonuclease HII IX91_11865 PF02684 Lipid-A-disaccharide synthetase IX91_11875 PF07977 FabA-like domain IX91_11880 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_11880 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IX91_11885 PF03938 Outer membrane protein (OmpH-like) IX91_11890 PF01103 Surface antigen IX91_11890 PF07244 Surface antigen variable number repeat IX91_11895 PF02163 Peptidase family M50 IX91_11895 PF17820 PDZ domain IX91_11900 PF13288 DXP reductoisomerase C-terminal domain IX91_11900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IX91_11900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IX91_11910 PF01255 Putative undecaprenyl diphosphate synthase IX91_11915 PF01765 Ribosome recycling factor IX91_11920 PF00696 Amino acid kinase family IX91_11925 PF00889 Elongation factor TS IX91_11930 PF00318 Ribosomal protein S2 IX91_11935 PF00557 Metallopeptidase family M24 IX91_11940 PF01842 ACT domain IX91_11940 PF08335 GlnD PII-uridylyltransferase IX91_11940 PF01966 HD domain IX91_11940 PF01909 Nucleotidyltransferase domain IX91_11945 PF11944 Protein of unknown function (DUF3461) IX91_11950 PF04608 Phosphatidylglycerophosphatase A IX91_11955 PF02769 AIR synthase related protein, C-terminal domain IX91_11955 PF00586 AIR synthase related protein, N-terminal domain IX91_11965 PF00885 6,7-dimethyl-8-ribityllumazine synthase IX91_11970 PF00925 GTP cyclohydrolase II IX91_11970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IX91_11975 PF00677 Lumazine binding domain IX91_11980 PF01872 RibD C-terminal domain IX91_11980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX91_11985 PF03477 ATP cone domain IX91_11990 PF00171 Aldehyde dehydrogenase family IX91_11995 PF01472 PUA domain IX91_11995 PF00696 Amino acid kinase family IX91_12000 PF07417 Sigma factor-binding transcriptional regulator Crl IX91_12010 PF00156 Phosphoribosyl transferase domain IX91_12015 PF00860 Permease family IX91_12025 PF01546 Peptidase family M20/M25/M40 IX91_12025 PF07687 Peptidase dimerisation domain IX91_12030 PF18030 RimK PreATP-grasp domain IX91_12030 PF08443 RimK-like ATP-grasp domain IX91_12035 PF18030 RimK PreATP-grasp domain IX91_12035 PF08443 RimK-like ATP-grasp domain IX91_12045 PF00209 Sodium:neurotransmitter symporter family IX91_12050 PF00990 Diguanylate cyclase, GGDEF domain IX91_12050 PF00563 EAL domain IX91_12050 PF01590 GAF domain IX91_12050 PF00360 Phytochrome region IX91_12065 PF09382 RQC domain IX91_12065 PF00271 Helicase conserved C-terminal domain IX91_12065 PF16124 RecQ zinc-binding IX91_12065 PF00270 DEAD/DEAH box helicase IX91_12065 PF00570 HRDC domain IX91_12070 PF00817 impB/mucB/samB family IX91_12070 PF11798 IMS family HHH motif IX91_12070 PF11799 impB/mucB/samB family C-terminal domain IX91_12075 PF00990 Diguanylate cyclase, GGDEF domain IX91_12075 PF00072 Response regulator receiver domain IX91_12080 PF04400 (Na+)-NQR maturation NqrM IX91_12085 PF02424 ApbE family IX91_12090 PF00970 Oxidoreductase FAD-binding domain IX91_12090 PF00111 2Fe-2S iron-sulfur cluster binding domain IX91_12090 PF00175 Oxidoreductase NAD-binding domain IX91_12095 PF02508 Rnf-Nqr subunit, membrane protein IX91_12100 PF02508 Rnf-Nqr subunit, membrane protein IX91_12105 PF04205 FMN-binding domain IX91_12110 PF03116 NQR2, RnfD, RnfE family IX91_12115 PF11973 NQRA C-terminal domain IX91_12115 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IX91_12120 PF01722 BolA-like protein IX91_12125 PF05175 Methyltransferase small domain IX91_12135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IX91_12140 PF07690 Major Facilitator Superfamily IX91_12150 PF04542 Sigma-70 region 2 IX91_12150 PF04545 Sigma-70, region 4 IX91_12165 PF08546 Ketopantoate reductase PanE/ApbA C terminal IX91_12165 PF02558 Ketopantoate reductase PanE/ApbA IX91_12170 PF01965 DJ-1/PfpI family IX91_12175 PF00266 Aminotransferase class-V IX91_12180 PF18073 Rubredoxin metal binding domain IX91_12190 PF18429 Domain of unknown function (DUF5609) IX91_12195 PF10144 Bacterial virulence factor haemolysin IX91_12200 PF01048 Phosphorylase superfamily IX91_12205 PF01676 Metalloenzyme superfamily IX91_12210 PF02885 Glycosyl transferase family, helical bundle domain IX91_12210 PF00591 Glycosyl transferase family, a/b domain IX91_12210 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IX91_12215 PF01791 DeoC/LacD family aldolase IX91_12225 PF07670 Nucleoside recognition IX91_12225 PF01773 Na+ dependent nucleoside transporter N-terminus IX91_12225 PF07662 Na+ dependent nucleoside transporter C-terminus IX91_12230 PF01026 TatD related DNase IX91_12240 PF03883 Peroxide stress protein YaaA IX91_12245 PF01235 Sodium:alanine symporter family IX91_12265 PF03167 Uracil DNA glycosylase superfamily IX91_12275 PF01228 Glycine radical IX91_12280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_12280 PF03466 LysR substrate binding domain IX91_12285 PF01925 Sulfite exporter TauE/SafE IX91_12290 PF02142 MGS-like domain IX91_12290 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IX91_12290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IX91_12295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IX91_12295 PF00117 Glutamine amidotransferase class-I IX91_12305 PF01113 Dihydrodipicolinate reductase, N-terminus IX91_12305 PF05173 Dihydrodipicolinate reductase, C-terminus IX91_12310 PF00293 NUDIX domain IX91_12315 PF07516 SecA Wing and Scaffold domain IX91_12315 PF01043 SecA preprotein cross-linking domain IX91_12315 PF07517 SecA DEAD-like domain IX91_12315 PF02810 SEC-C motif IX91_12330 PF00091 Tubulin/FtsZ family, GTPase domain IX91_12330 PF12327 FtsZ family, C-terminal domain IX91_12335 PF02491 SHS2 domain inserted in FTSA IX91_12340 PF08478 POTRA domain, FtsQ-type IX91_12340 PF03799 Cell division protein FtsQ IX91_12345 PF01225 Mur ligase family, catalytic domain IX91_12345 PF08245 Mur ligase middle domain IX91_12345 PF02875 Mur ligase family, glutamate ligase domain IX91_12350 PF03033 Glycosyltransferase family 28 N-terminal domain IX91_12350 PF04101 Glycosyltransferase family 28 C-terminal domain IX91_12355 PF01098 Cell cycle protein IX91_12365 PF00953 Glycosyl transferase family 4 IX91_12365 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IX91_12370 PF08245 Mur ligase middle domain IX91_12370 PF02875 Mur ligase family, glutamate ligase domain IX91_12370 PF01225 Mur ligase family, catalytic domain IX91_12375 PF01225 Mur ligase family, catalytic domain IX91_12375 PF02875 Mur ligase family, glutamate ligase domain IX91_12375 PF08245 Mur ligase middle domain IX91_12380 PF00905 Penicillin binding protein transpeptidase domain IX91_12380 PF03717 Penicillin-binding Protein dimerisation domain IX91_12385 PF04999 Cell division protein FtsL IX91_12390 PF01795 MraW methylase family IX91_12395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX91_12400 PF04348 LppC putative lipoprotein IX91_12405 PF02021 Uncharacterised protein family UPF0102 IX91_12410 PF13580 SIS domain IX91_12415 PF04972 BON domain IX91_12420 PF04386 Stringent starvation protein B IX91_12425 PF02798 Glutathione S-transferase, N-terminal domain IX91_12425 PF00043 Glutathione S-transferase, C-terminal domain IX91_12430 PF02167 Cytochrome C1 family IX91_12435 PF00032 Cytochrome b(C-terminal)/b6/petD IX91_12435 PF00033 Cytochrome b/b6/petB IX91_12440 PF00355 Rieske [2Fe-2S] domain IX91_12440 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IX91_12450 PF00380 Ribosomal protein S9/S16 IX91_12455 PF00572 Ribosomal protein L13 IX91_12460 PF03969 AFG1-like ATPase IX91_12465 PF06295 Protein of unknown function (DUF1043) IX91_12470 PF00595 PDZ domain IX91_12470 PF13180 PDZ domain IX91_12475 PF13180 PDZ domain IX91_12480 PF03989 DNA gyrase C-terminal domain, beta-propeller IX91_12480 PF00521 DNA gyrase/topoisomerase IV, subunit A IX91_12485 PF00986 DNA gyrase B subunit, carboxyl terminus IX91_12485 PF00204 DNA gyrase B IX91_12485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_12485 PF01751 Toprim domain IX91_12490 PF05728 Uncharacterised protein family (UPF0227) IX91_12495 PF00149 Calcineurin-like phosphoesterase IX91_12500 PF06853 Protein of unknown function (DUF1249) IX91_12505 PF00293 NUDIX domain IX91_12510 PF02321 Outer membrane efflux protein IX91_12520 PF00989 PAS fold IX91_12520 PF01627 Hpt domain IX91_12520 PF18415 Histidine kinase receptor ArcB trans-membrane domain IX91_12520 PF00512 His Kinase A (phospho-acceptor) domain IX91_12520 PF00072 Response regulator receiver domain IX91_12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_12525 PF00360 Phytochrome region IX91_12525 PF00563 EAL domain IX91_12525 PF01590 GAF domain IX91_12525 PF00990 Diguanylate cyclase, GGDEF domain IX91_12530 PF04055 Radical SAM superfamily IX91_12530 PF16199 Radical_SAM C-terminal domain IX91_12535 PF01645 Conserved region in glutamate synthase IX91_12535 PF01493 GXGXG motif IX91_12535 PF04898 Glutamate synthase central domain IX91_12535 PF00310 Glutamine amidotransferases class-II IX91_12540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IX91_12540 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_12550 PF00310 Glutamine amidotransferases class-II IX91_12550 PF04898 Glutamate synthase central domain IX91_12550 PF01645 Conserved region in glutamate synthase IX91_12550 PF01493 GXGXG motif IX91_12555 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_12555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IX91_12565 PF16198 tRNA pseudouridylate synthase B C-terminal domain IX91_12565 PF01509 TruB family pseudouridylate synthase (N terminal domain) IX91_12565 PF09157 Pseudouridine synthase II TruB, C-terminal IX91_12570 PF02033 Ribosome-binding factor A IX91_12575 PF04760 Translation initiation factor IF-2, N-terminal region IX91_12575 PF08364 Bacterial translation initiation factor IF-2 associated region IX91_12575 PF00009 Elongation factor Tu GTP binding domain IX91_12575 PF11987 Translation-initiation factor 2 IX91_12580 PF00575 S1 RNA binding domain IX91_12580 PF13184 NusA-like KH domain IX91_12580 PF08529 NusA N-terminal domain IX91_12585 PF17384 RimP C-terminal SH3 domain IX91_12585 PF02576 RimP N-terminal domain IX91_12600 PF03840 Preprotein translocase SecG subunit IX91_12610 PF13508 Acetyltransferase (GNAT) domain IX91_12620 PF03707 Bacterial signalling protein N terminal repeat IX91_12620 PF00990 Diguanylate cyclase, GGDEF domain IX91_12620 PF00563 EAL domain IX91_12635 PF01554 MatE IX91_12645 PF07719 Tetratricopeptide repeat IX91_12645 PF13181 Tetratricopeptide repeat IX91_12650 PF01138 3' exoribonuclease family, domain 1 IX91_12650 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IX91_12650 PF00013 KH domain IX91_12650 PF00575 S1 RNA binding domain IX91_12650 PF03725 3' exoribonuclease family, domain 2 IX91_12665 PF01048 Phosphorylase superfamily IX91_12675 PF01497 Periplasmic binding protein IX91_12680 PF03458 UPF0126 domain IX91_12685 PF14821 Threonine synthase N terminus IX91_12685 PF00291 Pyridoxal-phosphate dependent enzyme IX91_12695 PF03447 Homoserine dehydrogenase, NAD binding domain IX91_12695 PF00742 Homoserine dehydrogenase IX91_12695 PF13840 ACT domain IX91_12695 PF01842 ACT domain IX91_12695 PF00696 Amino acid kinase family IX91_12705 PF03737 Aldolase/RraA IX91_12715 PF00486 Transcriptional regulatory protein, C terminal IX91_12715 PF00072 Response regulator receiver domain IX91_12725 PF08335 GlnD PII-uridylyltransferase IX91_12725 PF03710 Glutamate-ammonia ligase adenylyltransferase IX91_12730 PF00672 HAMP domain IX91_12730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_12735 PF00520 Ion transport protein IX91_12735 PF00027 Cyclic nucleotide-binding domain IX91_12740 PF01928 CYTH domain IX91_12745 PF01865 Protein of unknown function DUF47 IX91_12750 PF01384 Phosphate transporter family IX91_12755 PF08239 Bacterial SH3 domain IX91_12765 PF01471 Putative peptidoglycan binding domain IX91_12765 PF13401 AAA domain IX91_12770 PF12627 Probable RNA and SrmB- binding site of polymerase A IX91_12770 PF01743 Poly A polymerase head domain IX91_12770 PF01966 HD domain IX91_12775 PF03952 Enolase, N-terminal domain IX91_12775 PF00113 Enolase, C-terminal TIM barrel domain IX91_12780 PF00117 Glutamine amidotransferase class-I IX91_12780 PF06418 CTP synthase N-terminus IX91_12785 PF03819 MazG nucleotide pyrophosphohydrolase domain IX91_12790 PF02824 TGS domain IX91_12790 PF04607 Region found in RelA / SpoT proteins IX91_12790 PF13291 ACT domain IX91_12795 PF01938 TRAM domain IX91_12795 PF05958 tRNA (Uracil-5-)-methyltransferase IX91_12800 PF00512 His Kinase A (phospho-acceptor) domain IX91_12800 PF01627 Hpt domain IX91_12800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX91_12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_12800 PF00672 HAMP domain IX91_12800 PF00072 Response regulator receiver domain IX91_12805 PF01648 4'-phosphopantetheinyl transferase superfamily IX91_12810 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IX91_12815 PF02565 Recombination protein O C terminal IX91_12815 PF11967 Recombination protein O N terminal IX91_12820 PF07650 KH domain IX91_12820 PF01926 50S ribosome-binding GTPase IX91_12825 PF14622 Ribonuclease-III-like IX91_12825 PF00035 Double-stranded RNA binding motif IX91_12830 PF10502 Signal peptidase, peptidase S26 IX91_12835 PF06421 GTP-binding protein LepA C-terminus IX91_12835 PF03144 Elongation factor Tu domain 2 IX91_12835 PF00009 Elongation factor Tu GTP binding domain IX91_12835 PF00679 Elongation factor G C-terminus IX91_12845 PF03888 MucB/RseB N-terminal domain IX91_12845 PF17188 MucB/RseB C-terminal domain IX91_12850 PF03872 Anti sigma-E protein RseA, N-terminal domain IX91_12850 PF03873 Anti sigma-E protein RseA, C-terminal domain IX91_12855 PF08281 Sigma-70, region 4 IX91_12855 PF04542 Sigma-70 region 2 IX91_12860 PF00890 FAD binding domain IX91_12860 PF02910 Fumarate reductase flavoprotein C-term IX91_12870 PF03937 Flavinator of succinate dehydrogenase IX91_12890 PF01494 FAD binding domain IX91_12895 PF01494 FAD binding domain IX91_12905 PF05164 Cell division protein ZapA IX91_12915 PF01812 5-formyltetrahydrofolate cyclo-ligase family IX91_12920 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IX91_12925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX91_12925 PF01842 ACT domain IX91_12925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX91_12930 PF10369 Small subunit of acetolactate synthase IX91_12935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX91_12935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX91_12935 PF00205 Thiamine pyrophosphate enzyme, central domain IX91_12940 PF00501 AMP-binding enzyme IX91_12945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_12945 PF03466 LysR substrate binding domain IX91_12955 PF01569 PAP2 superfamily IX91_12960 PF08502 LeuA allosteric (dimerisation) domain IX91_12960 PF00682 HMGL-like IX91_12965 PF00180 Isocitrate/isopropylmalate dehydrogenase IX91_12970 PF00330 Aconitase family (aconitate hydratase) IX91_12975 PF00694 Aconitase C-terminal domain IX91_13035 PF00072 Response regulator receiver domain IX91_13120 PF04262 Glutamate-cysteine ligase IX91_13125 PF05193 Peptidase M16 inactive domain IX91_13125 PF00675 Insulinase (Peptidase family M16) IX91_13130 PF09335 SNARE associated Golgi protein IX91_13140 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IX91_13145 PF00682 HMGL-like IX91_13145 PF02436 Conserved carboxylase domain IX91_13145 PF00364 Biotin-requiring enzyme IX91_13150 PF04277 Oxaloacetate decarboxylase, gamma chain IX91_13195 PF02599 Global regulator protein family IX91_13200 PF00696 Amino acid kinase family IX91_13200 PF01842 ACT domain IX91_13200 PF13840 ACT domain IX91_13205 PF01411 tRNA synthetases class II (A) IX91_13205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IX91_13205 PF02272 DHHA1 domain IX91_13210 PF02631 RecX family IX91_13215 PF00154 recA bacterial DNA recombination protein IX91_13220 PF02464 Competence-damaged protein IX91_13225 PF05190 MutS family domain IV IX91_13225 PF00488 MutS domain V IX91_13225 PF01624 MutS domain I IX91_13225 PF05188 MutS domain II IX91_13225 PF05192 MutS domain III IX91_13230 PF03739 Lipopolysaccharide export system permease LptF/LptG IX91_13235 PF03739 Lipopolysaccharide export system permease LptF/LptG IX91_13240 PF02789 Cytosol aminopeptidase family, N-terminal domain IX91_13240 PF00883 Cytosol aminopeptidase family, catalytic domain IX91_13245 PF04364 DNA polymerase III chi subunit, HolC IX91_13250 PF00133 tRNA synthetases class I (I, L, M and V) IX91_13250 PF10458 Valyl tRNA synthetase tRNA binding arm IX91_13250 PF08264 Anticodon-binding domain of tRNA IX91_13260 PF05987 Bacterial protein of unknown function (DUF898) IX91_13270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX91_13270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX91_13275 PF00849 RNA pseudouridylate synthase IX91_13280 PF00271 Helicase conserved C-terminal domain IX91_13280 PF12137 RNA polymerase recycling family C-terminal IX91_13280 PF18337 RapA N-terminal Tudor like domain IX91_13280 PF18339 RapA N-terminal Tudor like domain 1 IX91_13280 PF00176 SNF2 family N-terminal domain IX91_13285 PF02562 PhoH-like protein IX91_13285 PF13638 PIN domain IX91_13290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX91_13290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX91_13295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IX91_13295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IX91_13300 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IX91_13300 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IX91_13305 PF01042 Endoribonuclease L-PSP IX91_13315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IX91_13315 PF00056 lactate/malate dehydrogenase, NAD binding domain IX91_13325 PF16868 NMT1-like family IX91_13335 PF00582 Universal stress protein family IX91_13350 PF06877 Regulator of ribonuclease activity B IX91_13365 PF01523 Putative modulator of DNA gyrase IX91_13370 PF00795 Carbon-nitrogen hydrolase IX91_13375 PF13116 Protein of unknown function IX91_13375 PF13502 AsmA-like C-terminal region IX91_13380 PF10150 Ribonuclease E/G family IX91_13380 PF00575 S1 RNA binding domain IX91_13385 PF02545 Maf-like protein IX91_13390 PF04093 rod shape-determining protein MreD IX91_13395 PF04085 rod shape-determining protein MreC IX91_13430 PF00114 Pilin (bacterial filament) IX91_13430 PF07963 Prokaryotic N-terminal methylation motif IX91_13435 PF07963 Prokaryotic N-terminal methylation motif IX91_13435 PF00114 Pilin (bacterial filament) IX91_13445 PF00482 Type II secretion system (T2SS), protein F IX91_13450 PF00437 Type II/IV secretion system protein IX91_13450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IX91_13460 PF01471 Putative peptidoglycan binding domain IX91_13460 PF13401 AAA domain IX91_13465 PF00263 Bacterial type II and III secretion system protein IX91_13465 PF03958 Bacterial type II/III secretion system short domain IX91_13485 PF00563 EAL domain IX91_13485 PF17157 Gammaproteobacterial periplasmic sensor domain IX91_13485 PF00990 Diguanylate cyclase, GGDEF domain IX91_13490 PF00436 Single-strand binding protein family IX91_13495 PF00196 Bacterial regulatory proteins, luxR family IX91_13495 PF00072 Response regulator receiver domain IX91_13500 PF00483 Nucleotidyl transferase IX91_13505 PF00005 ABC transporter IX91_13505 PF17755 UvrA DNA-binding domain IX91_13505 PF17760 UvrA interaction domain IX91_13515 PF00266 Aminotransferase class-V IX91_13520 PF00696 Amino acid kinase family IX91_13520 PF01842 ACT domain IX91_13525 PF01523 Putative modulator of DNA gyrase IX91_13530 PF04751 Protein of unknown function (DUF615) IX91_13535 PF00005 ABC transporter IX91_13540 PF00528 Binding-protein-dependent transport system inner membrane component IX91_13550 PF02441 Flavoprotein IX91_13555 PF01225 Mur ligase family, catalytic domain IX91_13555 PF08245 Mur ligase middle domain IX91_13555 PF02875 Mur ligase family, glutamate ligase domain IX91_13560 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IX91_13570 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like IX91_13575 PF04357 TamB, inner membrane protein subunit of TAM complex IX91_13580 PF01103 Surface antigen IX91_13580 PF07244 Surface antigen variable number repeat IX91_13580 PF17243 POTRA domain TamA domain 1 IX91_13585 PF01625 Peptide methionine sulfoxide reductase IX91_13590 PF00072 Response regulator receiver domain IX91_13595 PF00909 Ammonium Transporter Family IX91_13605 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IX91_13620 PF00005 ABC transporter IX91_13645 PF00342 Phosphoglucose isomerase IX91_13650 PF01894 Uncharacterised protein family UPF0047 IX91_13665 PF01042 Endoribonuclease L-PSP IX91_13670 PF03313 Serine dehydratase alpha chain IX91_13675 PF13309 HTH domain IX91_13675 PF08348 YheO-like PAS domain IX91_13685 PF01168 Alanine racemase, N-terminal domain IX91_13685 PF00842 Alanine racemase, C-terminal domain IX91_13690 PF03796 DnaB-like helicase C terminal domain IX91_13690 PF00772 DnaB-like helicase N terminal domain IX91_13700 PF03948 Ribosomal protein L9, C-terminal domain IX91_13700 PF01281 Ribosomal protein L9, N-terminal domain IX91_13705 PF01084 Ribosomal protein S18 IX91_13710 PF00436 Single-strand binding protein family IX91_13715 PF01250 Ribosomal protein S6 IX91_13720 PF08019 Phosphoethanolamine transferase EptA/EptB IX91_13720 PF00884 Sulfatase IX91_13725 PF01219 Prokaryotic diacylglycerol kinase IX91_13730 PF00210 Ferritin-like domain IX91_13735 PF04324 BFD-like [2Fe-2S] binding domain IX91_13740 PF03144 Elongation factor Tu domain 2 IX91_13740 PF03143 Elongation factor Tu C-terminal domain IX91_13740 PF00009 Elongation factor Tu GTP binding domain IX91_13745 PF03764 Elongation factor G, domain IV IX91_13745 PF03144 Elongation factor Tu domain 2 IX91_13745 PF14492 Elongation Factor G, domain II IX91_13745 PF00009 Elongation factor Tu GTP binding domain IX91_13745 PF00679 Elongation factor G C-terminus IX91_13750 PF00177 Ribosomal protein S7p/S5e IX91_13755 PF00164 Ribosomal protein S12/S23 IX91_13760 PF04077 DsrH like protein IX91_13765 PF02635 DsrE/DsrF-like family IX91_13770 PF02635 DsrE/DsrF-like family IX91_13775 PF13309 HTH domain IX91_13775 PF08348 YheO-like PAS domain IX91_13780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX91_13780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX91_13790 PF04102 SlyX IX91_13795 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) IX91_13800 PF01145 SPFH domain / Band 7 family IX91_13805 PF12221 Bacterial membrane protein N terminal IX91_13805 PF01145 SPFH domain / Band 7 family IX91_13810 PF13167 GTP-binding GTPase N-terminal IX91_13810 PF01926 50S ribosome-binding GTPase IX91_13810 PF16360 GTP-binding GTPase Middle Region IX91_13815 PF17209 Hfq protein IX91_13825 PF01119 DNA mismatch repair protein, C-terminal domain IX91_13825 PF08676 MutL C terminal dimerisation domain IX91_13830 PF01520 N-acetylmuramoyl-L-alanine amidase IX91_13835 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IX91_13840 PF08331 Domain of unknown function (DUF1730) IX91_13905 PF00929 Exonuclease IX91_13910 PF03193 RsgA GTPase IX91_13915 PF02666 Phosphatidylserine decarboxylase IX91_13920 PF03600 Citrate transporter IX91_13920 PF02080 TrkA-C domain IX91_13925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_13925 PF00672 HAMP domain IX91_13925 PF02743 Cache domain IX91_13935 PF01676 Metalloenzyme superfamily IX91_13935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IX91_13940 PF01551 Peptidase family M23 IX91_13950 PF08361 MAATS-type transcriptional repressor, C-terminal region IX91_13950 PF00440 Bacterial regulatory proteins, tetR family IX91_13955 PF01208 Uroporphyrinogen decarboxylase (URO-D) IX91_13960 PF00293 NUDIX domain IX91_13960 PF09297 NADH pyrophosphatase zinc ribbon domain IX91_13965 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IX91_13970 PF00623 RNA polymerase Rpb1, domain 2 IX91_13970 PF05000 RNA polymerase Rpb1, domain 4 IX91_13970 PF04997 RNA polymerase Rpb1, domain 1 IX91_13970 PF04983 RNA polymerase Rpb1, domain 3 IX91_13970 PF04998 RNA polymerase Rpb1, domain 5 IX91_13975 PF04561 RNA polymerase Rpb2, domain 2 IX91_13975 PF04565 RNA polymerase Rpb2, domain 3 IX91_13975 PF00562 RNA polymerase Rpb2, domain 6 IX91_13975 PF04563 RNA polymerase beta subunit IX91_13975 PF10385 RNA polymerase beta subunit external 1 domain IX91_13975 PF04560 RNA polymerase Rpb2, domain 7 IX91_13980 PF16320 Ribosomal protein L7/L12 dimerisation domain IX91_13980 PF00542 Ribosomal protein L7/L12 C-terminal domain IX91_13985 PF00466 Ribosomal protein L10 IX91_13990 PF00687 Ribosomal protein L1p/L10e family IX91_13995 PF03946 Ribosomal protein L11, N-terminal domain IX91_13995 PF00298 Ribosomal protein L11, RNA binding domain IX91_14000 PF02357 Transcription termination factor nusG IX91_14000 PF00467 KOW motif IX91_14005 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IX91_14010 PF00009 Elongation factor Tu GTP binding domain IX91_14010 PF03144 Elongation factor Tu domain 2 IX91_14010 PF03143 Elongation factor Tu C-terminal domain IX91_14035 PF00485 Phosphoribulokinase / Uridine kinase family IX91_14050 PF00121 Triosephosphate isomerase IX91_14055 PF01554 MatE IX91_14060 PF03737 Aldolase/RraA IX91_14065 PF01040 UbiA prenyltransferase family IX91_14070 PF01132 Elongation factor P (EF-P) OB domain IX91_14070 PF09285 Elongation factor P, C-terminal IX91_14070 PF08207 Elongation factor P (EF-P) KOW-like domain IX91_14075 PF04055 Radical SAM superfamily IX91_14085 PF02308 MgtC family IX91_14090 PF03605 Anaerobic c4-dicarboxylate membrane transporter IX91_14095 PF00365 Phosphofructokinase IX91_14100 PF01545 Cation efflux family IX91_14100 PF16916 Dimerisation domain of Zinc Transporter IX91_14110 PF00072 Response regulator receiver domain IX91_14110 PF00486 Transcriptional regulatory protein, C terminal IX91_14115 PF00672 HAMP domain IX91_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_14115 PF00512 His Kinase A (phospho-acceptor) domain IX91_14115 PF16527 Two-component sensor protein CpxA, periplasmic domain IX91_14120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IX91_14120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IX91_14125 PF00588 SpoU rRNA Methylase family IX91_14130 PF00579 tRNA synthetases class I (W and Y) IX91_14135 PF13419 Haloacid dehalogenase-like hydrolase IX91_14140 PF00834 Ribulose-phosphate 3 epimerase family IX91_14145 PF02086 D12 class N6 adenine-specific DNA methyltransferase IX91_14160 PF01202 Shikimate kinase IX91_14165 PF03958 Bacterial type II/III secretion system short domain IX91_14165 PF07660 Secretin and TonB N terminus short domain IX91_14165 PF11741 AMIN domain IX91_14165 PF00263 Bacterial type II and III secretion system protein IX91_14190 PF00912 Transglycosylase IX91_14190 PF00905 Penicillin binding protein transpeptidase domain IX91_14190 PF17092 Penicillin-binding protein OB-like domain IX91_14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_14195 PF03466 LysR substrate binding domain IX91_14200 PF08534 Redoxin IX91_14200 PF00462 Glutaredoxin IX91_14205 PF01042 Endoribonuclease L-PSP IX91_14220 PF14698 Argininosuccinate lyase C-terminal IX91_14220 PF00206 Lyase IX91_14220 PF00583 Acetyltransferase (GNAT) family IX91_14225 PF00764 Arginosuccinate synthase IX91_14230 PF00696 Amino acid kinase family IX91_14235 PF01118 Semialdehyde dehydrogenase, NAD binding domain IX91_14235 PF02774 Semialdehyde dehydrogenase, dimerisation domain IX91_14245 PF00311 Phosphoenolpyruvate carboxylase IX91_14250 PF03551 Transcriptional regulator PadR-like family IX91_14250 PF10400 Virulence activator alpha C-term IX91_14255 PF06426 Serine acetyltransferase, N-terminal IX91_14255 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_14260 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IX91_14260 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IX91_14265 PF02556 Preprotein translocase subunit SecB IX91_14270 PF00581 Rhodanese-like domain IX91_14295 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF IX91_14305 PF06082 Exopolysaccharide biosynthesis protein YbjH IX91_14310 PF00152 tRNA synthetases class II (D, K and N) IX91_14315 PF00890 FAD binding domain IX91_14315 PF02910 Fumarate reductase flavoprotein C-term IX91_14320 PF13085 2Fe-2S iron-sulfur cluster binding domain IX91_14320 PF13183 4Fe-4S dicluster domain IX91_14325 PF02300 Fumarate reductase subunit C IX91_14330 PF02313 Fumarate reductase subunit D IX91_14335 PF02028 BCCT, betaine/carnitine/choline family transporter IX91_14345 PF07724 AAA domain (Cdc48 subfamily) IX91_14345 PF00004 ATPase family associated with various cellular activities (AAA) IX91_14355 PF05036 Sporulation related domain IX91_14360 PF00356 Bacterial regulatory proteins, lacI family IX91_14365 PF17764 3′ DNA-binding domain (3′BD) IX91_14365 PF00270 DEAD/DEAH box helicase IX91_14365 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IX91_14365 PF18074 Primosomal protein N C-terminal domain IX91_14365 PF00271 Helicase conserved C-terminal domain IX91_14375 PF00390 Malic enzyme, N-terminal domain IX91_14375 PF03949 Malic enzyme, NAD binding domain IX91_14385 PF01053 Cys/Met metabolism PLP-dependent enzyme IX91_14390 PF03447 Homoserine dehydrogenase, NAD binding domain IX91_14390 PF00696 Amino acid kinase family IX91_14390 PF00742 Homoserine dehydrogenase IX91_14395 PF02219 Methylenetetrahydrofolate reductase IX91_14405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IX91_14465 PF01177 Asp/Glu/Hydantoin racemase IX91_14475 PF07715 TonB-dependent Receptor Plug Domain IX91_14475 PF00593 TonB dependent receptor IX91_14480 PF05958 tRNA (Uracil-5-)-methyltransferase IX91_14485 PF07226 Protein of unknown function (DUF1422) IX91_14490 PF00440 Bacterial regulatory proteins, tetR family IX91_14495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX91_14495 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_14500 PF00756 Putative esterase IX91_14505 PF08240 Alcohol dehydrogenase GroES-like domain IX91_14505 PF00107 Zinc-binding dehydrogenase IX91_14510 PF01554 MatE IX91_14520 PF01726 LexA DNA binding domain IX91_14520 PF00717 Peptidase S24-like IX91_14525 PF01219 Prokaryotic diacylglycerol kinase IX91_14530 PF01553 Acyltransferase IX91_14535 PF01040 UbiA prenyltransferase family IX91_14540 PF04345 Chorismate lyase IX91_14545 PF03748 Flagellar basal body-associated protein FliL IX91_14550 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IX91_14550 PF01694 Rhomboid family IX91_14555 PF00581 Rhodanese-like domain IX91_14560 PF04542 Sigma-70 region 2 IX91_14560 PF00140 Sigma-70 factor, region 1.2 IX91_14560 PF04545 Sigma-70, region 4 IX91_14565 PF18075 FtsX extracellular domain IX91_14570 PF00005 ABC transporter IX91_14575 PF00448 SRP54-type protein, GTPase domain IX91_14575 PF02881 SRP54-type protein, helical bundle domain IX91_14590 PF01914 MarC family integral membrane protein IX91_14635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX91_14635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX91_14640 PF01022 Bacterial regulatory protein, arsR family IX91_14645 PF08668 HDOD domain IX91_14645 PF00563 EAL domain IX91_14650 PF01810 LysE type translocator IX91_14655 PF12146 Serine aminopeptidase, S33 IX91_14680 PF10442 FIST C domain IX91_14680 PF00990 Diguanylate cyclase, GGDEF domain IX91_14680 PF00563 EAL domain IX91_14680 PF08495 FIST N domain IX91_14685 PF13419 Haloacid dehalogenase-like hydrolase IX91_14690 PF00589 Phage integrase family IX91_14690 PF02899 Phage integrase, N-terminal SAM-like domain IX91_14700 PF01678 Diaminopimelate epimerase IX91_14705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IX91_14705 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IX91_14715 PF01491 Frataxin-like domain IX91_14720 PF12633 Adenylate cyclase NT domain IX91_14720 PF01295 Adenylate cyclase, class-I IX91_14725 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IX91_14725 PF03900 Porphobilinogen deaminase, C-terminal domain IX91_14730 PF02602 Uroporphyrinogen-III synthase HemD IX91_14735 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IX91_14740 PF07219 HemY protein N-terminus IX91_14815 PF00175 Oxidoreductase NAD-binding domain IX91_14820 PF00175 Oxidoreductase NAD-binding domain IX91_14820 PF00970 Oxidoreductase FAD-binding domain IX91_14820 PF00111 2Fe-2S iron-sulfur cluster binding domain IX91_14825 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IX91_14835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX91_14835 PF07498 Rho termination factor, N-terminal domain IX91_14835 PF07497 Rho termination factor, RNA-binding domain IX91_14840 PF00085 Thioredoxin IX91_14845 PF00271 Helicase conserved C-terminal domain IX91_14845 PF00270 DEAD/DEAH box helicase IX91_14850 PF02541 Ppx/GppA phosphatase family IX91_14855 PF02592 Putative vitamin uptake transporter IX91_14865 PF09382 RQC domain IX91_14865 PF16124 RecQ zinc-binding IX91_14865 PF00570 HRDC domain IX91_14865 PF00271 Helicase conserved C-terminal domain IX91_14865 PF00270 DEAD/DEAH box helicase IX91_14870 PF00892 EamA-like transporter family IX91_14880 PF01810 LysE type translocator IX91_14895 PF13361 UvrD-like helicase C-terminal domain IX91_14895 PF00580 UvrD/REP helicase N-terminal domain IX91_14905 PF05114 Protein of unknown function (DUF692) IX91_14925 PF01432 Peptidase family M3 IX91_14930 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IX91_14940 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_14940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX91_14945 PF00072 Response regulator receiver domain IX91_14960 PF12911 N-terminal TM domain of oligopeptide transport permease C IX91_14960 PF00528 Binding-protein-dependent transport system inner membrane component IX91_14970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_14975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_14975 PF00005 ABC transporter IX91_15005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IX91_15010 PF13361 UvrD-like helicase C-terminal domain IX91_15010 PF00580 UvrD/REP helicase N-terminal domain IX91_15015 PF00440 Bacterial regulatory proteins, tetR family IX91_15020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_15025 PF00873 AcrB/AcrD/AcrF family IX91_15030 PF04380 Membrane fusogenic activity IX91_15040 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IX91_15040 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IX91_15045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_15045 PF03466 LysR substrate binding domain IX91_15050 PF04055 Radical SAM superfamily IX91_15050 PF06969 HemN C-terminal domain IX91_15060 PF04220 Der GTPase activator (YihI) IX91_15070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IX91_15075 PF01926 50S ribosome-binding GTPase IX91_15080 PF01612 3'-5' exonuclease IX91_15080 PF00476 DNA polymerase family A IX91_15080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IX91_15080 PF01367 5'-3' exonuclease, C-terminal SAM fold IX91_15090 PF00490 Delta-aminolevulinic acid dehydratase IX91_15095 PF01026 TatD related DNase IX91_15100 PF00902 Sec-independent protein translocase protein (TatC) IX91_15105 PF02416 mttA/Hcf106 family IX91_15115 PF03109 ABC1 family IX91_15120 PF02036 SCP-2 sterol transfer family IX91_15125 PF01209 ubiE/COQ5 methyltransferase family IX91_15130 PF02646 RmuC family IX91_15140 PF08668 HDOD domain IX91_15145 PF12833 Helix-turn-helix domain IX91_15145 PF12852 Cupin IX91_15160 PF10625 Universal stress protein B (UspB) IX91_15165 PF00210 Ferritin-like domain IX91_15170 PF00582 Universal stress protein family IX91_15175 PF00892 EamA-like transporter family IX91_15185 PF04445 Putative SAM-dependent methyltransferase IX91_15190 PF08448 PAS fold IX91_15190 PF00990 Diguanylate cyclase, GGDEF domain IX91_15190 PF00563 EAL domain IX91_15195 PF13404 AsnC-type helix-turn-helix domain IX91_15195 PF01037 Lrp/AsnC ligand binding domain IX91_15205 PF07690 Major Facilitator Superfamily IX91_15210 PF03466 LysR substrate binding domain IX91_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_15215 PF00557 Metallopeptidase family M24 IX91_15215 PF01321 Creatinase/Prolidase N-terminal domain IX91_15215 PF01321 Creatinase/Prolidase N-terminal domain IX91_15215 PF00557 Metallopeptidase family M24 IX91_15220 PF04055 Radical SAM superfamily IX91_15220 PF06968 Biotin and Thiamin Synthesis associated domain IX91_15225 PF05690 Thiazole biosynthesis protein ThiG IX91_15230 PF02597 ThiS family IX91_15235 PF00899 ThiF family IX91_15240 PF02581 Thiamine monophosphate synthase IX91_15245 PF13667 ThiC-associated domain IX91_15245 PF01964 Radical SAM ThiC family IX91_15250 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IX91_15255 PF00394 Multicopper oxidase IX91_15255 PF07731 Multicopper oxidase IX91_15255 PF07732 Multicopper oxidase IX91_15310 PF12724 Flavodoxin domain IX91_15315 PF02386 Cation transport protein IX91_15320 PF01205 Uncharacterized protein family UPF0029 IX91_15320 PF09186 Domain of unknown function (DUF1949) IX91_15325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IX91_15325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IX91_15325 PF00378 Enoyl-CoA hydratase/isomerase IX91_15330 PF02803 Thiolase, C-terminal domain IX91_15330 PF00108 Thiolase, N-terminal domain IX91_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_15335 PF03466 LysR substrate binding domain IX91_15340 PF07690 Major Facilitator Superfamily IX91_15345 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_15350 PF00528 Binding-protein-dependent transport system inner membrane component IX91_15355 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_15355 PF12804 MobA-like NTP transferase domain IX91_15360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IX91_15360 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IX91_15365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX91_15365 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX91_15370 PF00231 ATP synthase IX91_15375 PF02874 ATP synthase alpha/beta family, beta-barrel domain IX91_15375 PF00306 ATP synthase alpha/beta chain, C terminal domain IX91_15375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IX91_15380 PF00213 ATP synthase delta (OSCP) subunit IX91_15385 PF00430 ATP synthase B/B' CF(0) IX91_15390 PF00137 ATP synthase subunit C IX91_15395 PF00119 ATP synthase A chain IX91_15400 PF03899 ATP synthase I chain IX91_15405 PF17762 HTH domain found in ParB protein IX91_15405 PF02195 ParB-like nuclease domain IX91_15410 PF13614 AAA domain IX91_15415 PF02527 rRNA small subunit methyltransferase G IX91_15420 PF13932 GidA associated domain IX91_15420 PF01134 Glucose inhibited division protein A IX91_15425 PF00258 Flavodoxin IX91_15430 PF10396 GTP-binding protein TrmE N-terminus IX91_15430 PF01926 50S ribosome-binding GTPase IX91_15430 PF12631 MnmE helical domain IX91_15435 PF14849 YidC periplasmic domain IX91_15435 PF02096 60Kd inner membrane protein IX91_15440 PF00825 Ribonuclease P IX91_15450 PF00005 ABC transporter IX91_15455 PF00528 Binding-protein-dependent transport system inner membrane component IX91_15460 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_15470 PF18607 ParA helix turn helix domain IX91_15470 PF13614 AAA domain IX91_15475 PF08775 ParB family IX91_15475 PF02195 ParB-like nuclease domain IX91_15480 PF13718 GNAT acetyltransferase 2 IX91_15480 PF05127 Helicase IX91_15490 PF00072 Response regulator receiver domain IX91_15495 PF02895 Signal transducing histidine kinase, homodimeric domain IX91_15495 PF01584 CheW-like domain IX91_15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_15495 PF01627 Hpt domain IX91_15495 PF09078 CheY binding IX91_15500 PF01584 CheW-like domain IX91_15505 PF01584 CheW-like domain IX91_15510 PF02203 Tar ligand binding domain homologue IX91_15510 PF00672 HAMP domain IX91_15510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_15515 PF03705 CheR methyltransferase, all-alpha domain IX91_15515 PF01739 CheR methyltransferase, SAM binding domain IX91_15520 PF03975 CheD chemotactic sensory transduction IX91_15525 PF01339 CheB methylesterase IX91_15525 PF00072 Response regulator receiver domain IX91_15530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_15530 PF02743 Cache domain IX91_15530 PF00672 HAMP domain IX91_15540 PF00072 Response regulator receiver domain IX91_15540 PF00990 Diguanylate cyclase, GGDEF domain IX91_15555 PF11490 DNA polymerase III polC-type N-terminus II IX91_15555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IX91_15555 PF00929 Exonuclease IX91_15555 PF02811 PHP domain IX91_15555 PF14579 Helix-hairpin-helix motif IX91_15555 PF07733 Bacterial DNA polymerase III alpha NTPase domain IX91_15560 PF02219 Methylenetetrahydrofolate reductase IX91_15560 PF02574 Homocysteine S-methyltransferase IX91_15565 PF06224 Winged helix DNA-binding domain IX91_15570 PF07690 Major Facilitator Superfamily IX91_15610 PF01553 Acyltransferase IX91_15615 PF17158 Membrane-associated sensor, integral membrane domain IX91_15615 PF00990 Diguanylate cyclase, GGDEF domain IX91_15620 PF13458 Periplasmic binding protein IX91_15645 PF00082 Subtilase family IX91_15650 PF00155 Aminotransferase class I and II IX91_15655 PF03553 Na+/H+ antiporter family IX91_15660 PF00356 Bacterial regulatory proteins, lacI family IX91_15665 PF03475 3-alpha domain IX91_15665 PF03473 MOSC domain IX91_15675 PF01037 Lrp/AsnC ligand binding domain IX91_15675 PF13404 AsnC-type helix-turn-helix domain IX91_15680 PF01810 LysE type translocator IX91_15690 PF00561 alpha/beta hydrolase fold IX91_15700 PF02311 AraC-like ligand binding domain IX91_15700 PF12833 Helix-turn-helix domain IX91_15710 PF00583 Acetyltransferase (GNAT) family IX91_15715 PF00202 Aminotransferase class-III IX91_15720 PF06339 Ectoine synthase IX91_15725 PF00696 Amino acid kinase family IX91_15725 PF13840 ACT domain IX91_15735 PF00291 Pyridoxal-phosphate dependent enzyme IX91_15740 PF01042 Endoribonuclease L-PSP IX91_15745 PF01321 Creatinase/Prolidase N-terminal domain IX91_15745 PF00557 Metallopeptidase family M24 IX91_15765 PF08348 YheO-like PAS domain IX91_15765 PF13309 HTH domain IX91_15770 PF00557 Metallopeptidase family M24 IX91_15770 PF01321 Creatinase/Prolidase N-terminal domain IX91_15780 PF07687 Peptidase dimerisation domain IX91_15780 PF01546 Peptidase family M20/M25/M40 IX91_15785 PF03466 LysR substrate binding domain IX91_15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_15800 PF07690 Major Facilitator Superfamily IX91_15810 PF12833 Helix-turn-helix domain IX91_15810 PF02311 AraC-like ligand binding domain IX91_15840 PF00005 ABC transporter IX91_15860 PF07702 UTRA domain IX91_15860 PF00392 Bacterial regulatory proteins, gntR family IX91_15865 PF00005 ABC transporter IX91_15875 PF01380 SIS domain IX91_15875 PF02685 Glucokinase IX91_15875 PF01418 Helix-turn-helix domain, rpiR family IX91_15885 PF07969 Amidohydrolase family IX91_15895 PF00474 Sodium:solute symporter family IX91_15900 PF00294 pfkB family carbohydrate kinase IX91_15905 PF01081 KDPG and KHG aldolase IX91_15910 PF00728 Glycosyl hydrolase family 20, catalytic domain IX91_15910 PF02838 Glycosyl hydrolase family 20, domain 2 IX91_15930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_15930 PF00672 HAMP domain IX91_15935 PF01327 Polypeptide deformylase IX91_15940 PF02743 Cache domain IX91_15940 PF00512 His Kinase A (phospho-acceptor) domain IX91_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_15945 PF00158 Sigma-54 interaction domain IX91_15945 PF02954 Bacterial regulatory protein, Fis family IX91_15945 PF00072 Response regulator receiver domain IX91_15960 PF00005 ABC transporter IX91_15965 PF00528 Binding-protein-dependent transport system inner membrane component IX91_15970 PF00528 Binding-protein-dependent transport system inner membrane component IX91_16000 PF07690 Major Facilitator Superfamily IX91_16005 PF03466 LysR substrate binding domain IX91_16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_16010 PF03466 LysR substrate binding domain IX91_16010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_16025 PF01966 HD domain IX91_16040 PF00588 SpoU rRNA Methylase family IX91_16040 PF08032 RNA 2'-O ribose methyltransferase substrate binding IX91_16045 PF13673 Acetyltransferase (GNAT) domain IX91_16050 PF13649 Methyltransferase domain IX91_16055 PF01327 Polypeptide deformylase IX91_16060 PF00501 AMP-binding enzyme IX91_16060 PF13193 AMP-binding enzyme C-terminal domain IX91_16060 PF00550 Phosphopantetheine attachment site IX91_16060 PF00668 Condensation domain IX91_16065 PF02801 Beta-ketoacyl synthase, C-terminal domain IX91_16065 PF00109 Beta-ketoacyl synthase, N-terminal domain IX91_16065 PF16197 Ketoacyl-synthetase C-terminal extension IX91_16065 PF00668 Condensation domain IX91_16065 PF00550 Phosphopantetheine attachment site IX91_16065 PF00698 Acyl transferase domain IX91_16070 PF00668 Condensation domain IX91_16070 PF00550 Phosphopantetheine attachment site IX91_16070 PF00501 AMP-binding enzyme IX91_16070 PF13193 AMP-binding enzyme C-terminal domain IX91_16075 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IX91_16075 PF01648 4'-phosphopantetheinyl transferase superfamily IX91_16085 PF03466 LysR substrate binding domain IX91_16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_16090 PF00873 AcrB/AcrD/AcrF family IX91_16095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_16130 PF00037 4Fe-4S binding domain IX91_16130 PF11953 Domain of unknown function (DUF3470) IX91_16150 PF13443 Cro/C1-type HTH DNA-binding domain IX91_16160 PF00753 Metallo-beta-lactamase superfamily IX91_16180 PF00581 Rhodanese-like domain IX91_16190 PF00892 EamA-like transporter family IX91_16195 PF01380 SIS domain IX91_16195 PF01418 Helix-turn-helix domain, rpiR family IX91_16200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_16200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX91_16200 PF02378 Phosphotransferase system, EIIC IX91_16205 PF09261 Alpha mannosidase middle domain IX91_16205 PF07748 Glycosyl hydrolases family 38 C-terminal domain IX91_16205 PF01074 Glycosyl hydrolases family 38 N-terminal domain IX91_16210 PF00128 Alpha amylase, catalytic domain IX91_16215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_16215 PF02378 Phosphotransferase system, EIIC IX91_16215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX91_16220 PF01238 Phosphomannose isomerase type I IX91_16225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IX91_16240 PF00171 Aldehyde dehydrogenase family IX91_16250 PF02028 BCCT, betaine/carnitine/choline family transporter IX91_16265 PF01810 LysE type translocator IX91_16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_16270 PF03466 LysR substrate binding domain IX91_16275 PF00356 Bacterial regulatory proteins, lacI family IX91_16280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_16290 PF03611 PTS system sugar-specific permease component IX91_16305 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_16305 PF12464 Maltose acetyltransferase IX91_16310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_16310 PF03466 LysR substrate binding domain IX91_16315 PF00144 Beta-lactamase IX91_16350 PF01979 Amidohydrolase family IX91_16355 PF00860 Permease family IX91_16365 PF00576 HIUase/Transthyretin family IX91_16375 PF09349 OHCU decarboxylase IX91_16375 PF01014 Uricase IX91_16380 PF03561 Allantoicase repeat IX91_16385 PF04115 Ureidoglycolate lyase IX91_16395 PF00672 HAMP domain IX91_16395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_16395 PF02743 Cache domain IX91_16405 PF05922 Peptidase inhibitor I9 IX91_16405 PF04151 Bacterial pre-peptidase C-terminal domain IX91_16405 PF00082 Subtilase family IX91_16415 PF02653 Branched-chain amino acid transport system / permease component IX91_16425 PF12399 Branched-chain amino acid ATP-binding cassette transporter IX91_16425 PF00005 ABC transporter IX91_16430 PF00005 ABC transporter IX91_16435 PF01774 UreD urease accessory protein IX91_16440 PF00547 Urease, gamma subunit IX91_16445 PF00699 Urease beta subunit IX91_16450 PF01979 Amidohydrolase family IX91_16450 PF00449 Urease alpha-subunit, N-terminal domain IX91_16455 PF02814 UreE urease accessory protein, N-terminal domain IX91_16455 PF05194 UreE urease accessory protein, C-terminal domain IX91_16465 PF01730 UreF IX91_16470 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX91_16485 PF00512 His Kinase A (phospho-acceptor) domain IX91_16485 PF01627 Hpt domain IX91_16485 PF00072 Response regulator receiver domain IX91_16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_16485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX91_16485 PF00672 HAMP domain IX91_16490 PF02743 Cache domain IX91_16490 PF00672 HAMP domain IX91_16490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_16495 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_16500 PF01979 Amidohydrolase family IX91_16510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IX91_16510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IX91_16515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IX91_16515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IX91_16515 PF01799 [2Fe-2S] binding domain IX91_16515 PF00111 2Fe-2S iron-sulfur cluster binding domain IX91_16520 PF07729 FCD domain IX91_16520 PF00392 Bacterial regulatory proteins, gntR family IX91_16525 PF04151 Bacterial pre-peptidase C-terminal domain IX91_16525 PF02868 Thermolysin metallopeptidase, alpha-helical domain IX91_16525 PF07504 Fungalysin/Thermolysin Propeptide Motif IX91_16525 PF03413 Peptidase propeptide and YPEB domain IX91_16525 PF01447 Thermolysin metallopeptidase, catalytic domain IX91_16535 PF04116 Fatty acid hydroxylase superfamily IX91_16545 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IX91_16545 PF12833 Helix-turn-helix domain IX91_16550 PF00491 Arginase family IX91_16555 PF17944 Arginine decarboxylase C-terminal helical extension IX91_16555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IX91_16555 PF17810 Arginine decarboxylase helical bundle domain IX91_16565 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IX91_16570 PF00313 'Cold-shock' DNA-binding domain IX91_16580 PF00150 Cellulase (glycosyl hydrolase family 5) IX91_16580 PF14600 Cellulose-binding domain IX91_16585 PF00109 Beta-ketoacyl synthase, N-terminal domain IX91_16585 PF02801 Beta-ketoacyl synthase, C-terminal domain IX91_16595 PF07977 FabA-like domain IX91_16600 PF02801 Beta-ketoacyl synthase, C-terminal domain IX91_16600 PF00109 Beta-ketoacyl synthase, N-terminal domain IX91_16625 PF00221 Aromatic amino acid lyase IX91_16640 PF00501 AMP-binding enzyme IX91_16640 PF13193 AMP-binding enzyme C-terminal domain IX91_16650 PF00550 Phosphopantetheine attachment site IX91_16655 PF00550 Phosphopantetheine attachment site IX91_16680 PF04820 Tryptophan halogenase IX91_16695 PF05231 MASE1 IX91_16695 PF00563 EAL domain IX91_16710 PF00375 Sodium:dicarboxylate symporter family IX91_16715 PF13091 PLD-like domain IX91_16720 PF01810 LysE type translocator IX91_16725 PF01906 Putative heavy-metal-binding IX91_16730 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IX91_16735 PF03466 LysR substrate binding domain IX91_16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_16740 PF00892 EamA-like transporter family IX91_16745 PF00291 Pyridoxal-phosphate dependent enzyme IX91_16750 PF00106 short chain dehydrogenase IX91_16760 PF08453 Peptidase family M9 N-terminal IX91_16760 PF01752 Collagenase IX91_16765 PF03372 Endonuclease/Exonuclease/phosphatase family IX91_16775 PF01752 Collagenase IX91_16775 PF04151 Bacterial pre-peptidase C-terminal domain IX91_16775 PF08453 Peptidase family M9 N-terminal IX91_16790 PF00582 Universal stress protein family IX91_16810 PF00933 Glycosyl hydrolase family 3 N terminal domain IX91_16815 PF10688 Bacterial inner membrane protein IX91_16820 PF01081 KDPG and KHG aldolase IX91_16825 PF00294 pfkB family carbohydrate kinase IX91_16830 PF02614 Glucuronate isomerase IX91_16835 PF01232 Mannitol dehydrogenase Rossmann domain IX91_16835 PF08125 Mannitol dehydrogenase C-terminal domain IX91_16840 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX91_16845 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IX91_16855 PF03480 Bacterial extracellular solute-binding protein, family 7 IX91_16860 PF07729 FCD domain IX91_16860 PF00392 Bacterial regulatory proteins, gntR family IX91_16865 PF03786 D-mannonate dehydratase (UxuA) IX91_16870 PF00579 tRNA synthetases class I (W and Y) IX91_16875 PF07702 UTRA domain IX91_16875 PF00392 Bacterial regulatory proteins, gntR family IX91_16885 PF00294 pfkB family carbohydrate kinase IX91_16890 PF03747 ADP-ribosylglycohydrolase IX91_16895 PF03825 Nucleoside H+ symporter IX91_16905 PF00557 Metallopeptidase family M24 IX91_16910 PF09905 DNA-binding protein VF530 IX91_16920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_16920 PF00005 ABC transporter IX91_16925 PF00005 ABC transporter IX91_16925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_16930 PF00528 Binding-protein-dependent transport system inner membrane component IX91_16930 PF12911 N-terminal TM domain of oligopeptide transport permease C IX91_16935 PF00528 Binding-protein-dependent transport system inner membrane component IX91_16940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_16950 PF00392 Bacterial regulatory proteins, gntR family IX91_16960 PF08448 PAS fold IX91_16960 PF00990 Diguanylate cyclase, GGDEF domain IX91_16960 PF00563 EAL domain IX91_16965 PF01156 Inosine-uridine preferring nucleoside hydrolase IX91_16970 PF01547 Bacterial extracellular solute-binding protein IX91_16975 PF07694 5TMR of 5TMR-LYT IX91_16975 PF06580 Histidine kinase IX91_16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_16980 PF00072 Response regulator receiver domain IX91_16980 PF00486 Transcriptional regulatory protein, C terminal IX91_16985 PF00367 phosphotransferase system, EIIB IX91_16985 PF02378 Phosphotransferase system, EIIC IX91_16990 PF00171 Aldehyde dehydrogenase family IX91_16995 PF05544 Proline racemase IX91_17000 PF05690 Thiazole biosynthesis protein ThiG IX91_17000 PF01266 FAD dependent oxidoreductase IX91_17005 PF02423 Ornithine cyclodeaminase/mu-crystallin family IX91_17010 PF00701 Dihydrodipicolinate synthetase family IX91_17020 PF07690 Major Facilitator Superfamily IX91_17025 PF00990 Diguanylate cyclase, GGDEF domain IX91_17025 PF03707 Bacterial signalling protein N terminal repeat IX91_17025 PF00563 EAL domain IX91_17035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IX91_17040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_17055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX91_17065 PF03480 Bacterial extracellular solute-binding protein, family 7 IX91_17070 PF17200 Single Cache domain 2 IX91_17070 PF07730 Histidine kinase IX91_17075 PF00072 Response regulator receiver domain IX91_17075 PF00196 Bacterial regulatory proteins, luxR family IX91_17080 PF03466 LysR substrate binding domain IX91_17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_17085 PF01144 Coenzyme A transferase IX91_17095 PF02803 Thiolase, C-terminal domain IX91_17095 PF00108 Thiolase, N-terminal domain IX91_17110 PF04463 Protein of unknown function (DUF523) IX91_17125 PF01568 Molydopterin dinucleotide binding domain IX91_17125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IX91_17125 PF00384 Molybdopterin oxidoreductase IX91_17125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX91_17125 PF12838 4Fe-4S dicluster domain IX91_17130 PF12838 4Fe-4S dicluster domain IX91_17130 PF12800 4Fe-4S binding domain IX91_17135 PF12837 4Fe-4S binding domain IX91_17135 PF12801 4Fe-4S binding domain IX91_17140 PF16326 ABC transporter C-terminal domain IX91_17140 PF00005 ABC transporter IX91_17140 PF12848 ABC transporter IX91_17145 PF00990 Diguanylate cyclase, GGDEF domain IX91_17145 PF17158 Membrane-associated sensor, integral membrane domain IX91_17180 PF00892 EamA-like transporter family IX91_17200 PF00072 Response regulator receiver domain IX91_17200 PF00990 Diguanylate cyclase, GGDEF domain IX91_17205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_17220 PF13411 MerR HTH family regulatory protein IX91_17225 PF00583 Acetyltransferase (GNAT) family IX91_17225 PF13673 Acetyltransferase (GNAT) domain IX91_17235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_17245 PF08448 PAS fold IX91_17245 PF00072 Response regulator receiver domain IX91_17245 PF13188 PAS domain IX91_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_17245 PF00512 His Kinase A (phospho-acceptor) domain IX91_17250 PF00989 PAS fold IX91_17250 PF00512 His Kinase A (phospho-acceptor) domain IX91_17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_17255 PF00072 Response regulator receiver domain IX91_17255 PF00158 Sigma-54 interaction domain IX91_17255 PF02954 Bacterial regulatory protein, Fis family IX91_17310 PF00128 Alpha amylase, catalytic domain IX91_17325 PF07690 Major Facilitator Superfamily IX91_17330 PF00924 Mechanosensitive ion channel IX91_17350 PF04055 Radical SAM superfamily IX91_17350 PF02310 B12 binding domain IX91_17360 PF00563 EAL domain IX91_17360 PF00990 Diguanylate cyclase, GGDEF domain IX91_17360 PF03707 Bacterial signalling protein N terminal repeat IX91_17365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_17365 PF03466 LysR substrate binding domain IX91_17380 PF00990 Diguanylate cyclase, GGDEF domain IX91_17380 PF03707 Bacterial signalling protein N terminal repeat IX91_17380 PF00563 EAL domain IX91_17390 PF03480 Bacterial extracellular solute-binding protein, family 7 IX91_17395 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IX91_17400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IX91_17405 PF01202 Shikimate kinase IX91_17410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX91_17410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IX91_17415 PF00356 Bacterial regulatory proteins, lacI family IX91_17415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IX91_17430 PF01575 MaoC like domain IX91_17505 PF00892 EamA-like transporter family IX91_17510 PF01810 LysE type translocator IX91_17530 PF01381 Helix-turn-helix IX91_17530 PF07883 Cupin domain IX91_17535 PF01810 LysE type translocator IX91_17550 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_17550 PF00512 His Kinase A (phospho-acceptor) domain IX91_17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_17585 PF13737 Transposase DDE domain IX91_17590 PF01966 HD domain IX91_17595 PF13737 Transposase DDE domain IX91_17620 PF01638 HxlR-like helix-turn-helix IX91_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_17625 PF03466 LysR substrate binding domain IX91_17640 PF01844 HNH endonuclease IX91_17660 PF02347 Glycine cleavage system P-protein IX91_17670 PF01597 Glycine cleavage H-protein IX91_17675 PF00464 Serine hydroxymethyltransferase IX91_17685 PF08669 Glycine cleavage T-protein C-terminal barrel domain IX91_17685 PF01571 Aminomethyltransferase folate-binding domain IX91_17700 PF00196 Bacterial regulatory proteins, luxR family IX91_17705 PF00909 Ammonium Transporter Family IX91_17715 PF05025 RbsD / FucU transport protein family IX91_17720 PF00005 ABC transporter IX91_17725 PF02653 Branched-chain amino acid transport system / permease component IX91_17730 PF13407 Periplasmic binding protein domain IX91_17735 PF00294 pfkB family carbohydrate kinase IX91_17740 PF00356 Bacterial regulatory proteins, lacI family IX91_17745 PF11849 Domain of unknown function (DUF3369) IX91_17750 PF00512 His Kinase A (phospho-acceptor) domain IX91_17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_17750 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_17760 PF01584 CheW-like domain IX91_17760 PF00072 Response regulator receiver domain IX91_17770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IX91_17770 PF18029 Glyoxalase-like domain IX91_17775 PF17200 Single Cache domain 2 IX91_17775 PF00672 HAMP domain IX91_17775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_17780 PF12849 PBP superfamily domain IX91_17785 PF00528 Binding-protein-dependent transport system inner membrane component IX91_17790 PF00528 Binding-protein-dependent transport system inner membrane component IX91_17795 PF00005 ABC transporter IX91_17805 PF00990 Diguanylate cyclase, GGDEF domain IX91_17805 PF17151 Periplasmic sensor domain IX91_17840 PF08525 Opacity-associated protein A N-terminal motif IX91_17840 PF01476 LysM domain IX91_17840 PF01551 Peptidase family M23 IX91_17845 PF03922 OmpW family IX91_17850 PF00391 PEP-utilising enzyme, mobile domain IX91_17850 PF02896 PEP-utilising enzyme, TIM barrel domain IX91_17850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IX91_17865 PF00005 ABC transporter IX91_17870 PF01032 FecCD transport family IX91_17880 PF02472 Biopolymer transport protein ExbD/TolR IX91_17885 PF01618 MotA/TolQ/ExbB proton channel family IX91_17890 PF03544 Gram-negative bacterial TonB protein C-terminal IX91_17895 PF04055 Radical SAM superfamily IX91_17900 PF06228 Haem utilisation ChuX/HutX IX91_17905 PF01243 Pyridoxamine 5'-phosphate oxidase IX91_17910 PF01923 Cobalamin adenosyltransferase IX91_17920 PF00392 Bacterial regulatory proteins, gntR family IX91_17920 PF00155 Aminotransferase class I and II IX91_17960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_17960 PF08447 PAS fold IX91_17965 PF08678 Rsbr N terminal IX91_17965 PF01740 STAS domain IX91_17975 PF13581 Histidine kinase-like ATPase domain IX91_17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_17985 PF00512 His Kinase A (phospho-acceptor) domain IX91_17985 PF00072 Response regulator receiver domain IX91_17985 PF01627 Hpt domain IX91_17985 PF00672 HAMP domain IX91_17985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX91_17990 PF00072 Response regulator receiver domain IX91_18005 PF03853 YjeF-related protein N-terminus IX91_18005 PF01256 Carbohydrate kinase IX91_18010 PF03129 Anticodon binding domain IX91_18010 PF02824 TGS domain IX91_18010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IX91_18010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IX91_18015 PF00707 Translation initiation factor IF-3, C-terminal domain IX91_18015 PF05198 Translation initiation factor IF-3, N-terminal domain IX91_18020 PF01632 Ribosomal protein L35 IX91_18045 PF01209 ubiE/COQ5 methyltransferase family IX91_18055 PF00293 NUDIX domain IX91_18055 PF09297 NADH pyrophosphatase zinc ribbon domain IX91_18075 PF02567 Phenazine biosynthesis-like protein IX91_18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_18085 PF03466 LysR substrate binding domain IX91_18095 PF00501 AMP-binding enzyme IX91_18095 PF13193 AMP-binding enzyme C-terminal domain IX91_18100 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IX91_18105 PF01329 Pterin 4 alpha carbinolamine dehydratase IX91_18115 PF00990 Diguanylate cyclase, GGDEF domain IX91_18115 PF00563 EAL domain IX91_18115 PF03707 Bacterial signalling protein N terminal repeat IX91_18150 PF02355 Protein export membrane protein IX91_18150 PF13721 SecD export protein N-terminal TM region IX91_18150 PF07549 SecD/SecF GG Motif IX91_18155 PF02355 Protein export membrane protein IX91_18155 PF07549 SecD/SecF GG Motif IX91_18160 PF01042 Endoribonuclease L-PSP IX91_18175 PF00005 ABC transporter IX91_18180 PF12704 MacB-like periplasmic core domain IX91_18180 PF02687 FtsX-like permease family IX91_18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_18195 PF06580 Histidine kinase IX91_18195 PF13492 GAF domain IX91_18195 PF07694 5TMR of 5TMR-LYT IX91_18200 PF04397 LytTr DNA-binding domain IX91_18200 PF00072 Response regulator receiver domain IX91_18215 PF00512 His Kinase A (phospho-acceptor) domain IX91_18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_18215 PF00672 HAMP domain IX91_18220 PF00072 Response regulator receiver domain IX91_18220 PF00486 Transcriptional regulatory protein, C terminal IX91_18245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_18245 PF03466 LysR substrate binding domain IX91_18250 PF00128 Alpha amylase, catalytic domain IX91_18250 PF16657 Maltogenic Amylase, C-terminal domain IX91_18260 PF01547 Bacterial extracellular solute-binding protein IX91_18265 PF02903 Alpha amylase, N-terminal ig-like domain IX91_18265 PF00128 Alpha amylase, catalytic domain IX91_18270 PF16657 Maltogenic Amylase, C-terminal domain IX91_18270 PF00128 Alpha amylase, catalytic domain IX91_18270 PF02903 Alpha amylase, N-terminal ig-like domain IX91_18285 PF13378 Enolase C-terminal domain-like IX91_18285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IX91_18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_18295 PF03466 LysR substrate binding domain IX91_18300 PF00012 Hsp70 protein IX91_18305 PF02743 Cache domain IX91_18305 PF00672 HAMP domain IX91_18305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_18330 PF09278 MerR, DNA binding IX91_18330 PF00376 MerR family regulatory protein IX91_18340 PF01625 Peptide methionine sulfoxide reductase IX91_18340 PF01641 SelR domain IX91_18345 PF13599 Pentapeptide repeats (9 copies) IX91_18350 PF03824 High-affinity nickel-transport protein IX91_18360 PF01297 Zinc-uptake complex component A periplasmic IX91_18365 PF00114 Pilin (bacterial filament) IX91_18365 PF07963 Prokaryotic N-terminal methylation motif IX91_18420 PF00563 EAL domain IX91_18420 PF00990 Diguanylate cyclase, GGDEF domain IX91_18420 PF03707 Bacterial signalling protein N terminal repeat IX91_18420 PF13188 PAS domain IX91_18425 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IX91_18445 PF00873 AcrB/AcrD/AcrF family IX91_18450 PF00873 AcrB/AcrD/AcrF family IX91_18460 PF00440 Bacterial regulatory proteins, tetR family IX91_18460 PF13977 BetI-type transcriptional repressor, C-terminal IX91_18480 PF00072 Response regulator receiver domain IX91_18480 PF00486 Transcriptional regulatory protein, C terminal IX91_18490 PF00990 Diguanylate cyclase, GGDEF domain IX91_18490 PF03707 Bacterial signalling protein N terminal repeat IX91_18490 PF00563 EAL domain IX91_18510 PF00206 Lyase IX91_18510 PF10415 Fumarase C C-terminus IX91_18520 PF02798 Glutathione S-transferase, N-terminal domain IX91_18525 PF13419 Haloacid dehalogenase-like hydrolase IX91_18530 PF00128 Alpha amylase, catalytic domain IX91_18535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_18545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX91_18545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX91_18550 PF00141 Peroxidase IX91_18560 PF16884 N-terminal domain of oxidoreductase IX91_18560 PF00107 Zinc-binding dehydrogenase IX91_18565 PF16925 Tetracyclin repressor-like, C-terminal domain IX91_18565 PF00440 Bacterial regulatory proteins, tetR family IX91_18570 PF17158 Membrane-associated sensor, integral membrane domain IX91_18570 PF00990 Diguanylate cyclase, GGDEF domain IX91_18580 PF00271 Helicase conserved C-terminal domain IX91_18580 PF00270 DEAD/DEAH box helicase IX91_18600 PF00849 RNA pseudouridylate synthase IX91_18610 PF03466 LysR substrate binding domain IX91_18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_18615 PF04954 Siderophore-interacting protein IX91_18615 PF08021 Siderophore-interacting FAD-binding domain IX91_18620 PF01810 LysE type translocator IX91_18625 PF01037 Lrp/AsnC ligand binding domain IX91_18630 PF13609 Gram-negative porin IX91_18635 PF00672 HAMP domain IX91_18635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_18640 PF00478 IMP dehydrogenase / GMP reductase domain IX91_18665 PF00478 IMP dehydrogenase / GMP reductase domain IX91_18690 PF00009 Elongation factor Tu GTP binding domain IX91_18690 PF03764 Elongation factor G, domain IV IX91_18690 PF14492 Elongation Factor G, domain II IX91_18690 PF03144 Elongation factor Tu domain 2 IX91_18690 PF00679 Elongation factor G C-terminus IX91_18700 PF00005 ABC transporter IX91_18705 PF01497 Periplasmic binding protein IX91_18710 PF01032 FecCD transport family IX91_18715 PF00005 ABC transporter IX91_18720 PF03621 MbtH-like protein IX91_18725 PF00501 AMP-binding enzyme IX91_18725 PF00668 Condensation domain IX91_18725 PF13193 AMP-binding enzyme C-terminal domain IX91_18725 PF00550 Phosphopantetheine attachment site IX91_18730 PF00550 Phosphopantetheine attachment site IX91_18730 PF00668 Condensation domain IX91_18730 PF00501 AMP-binding enzyme IX91_18730 PF13193 AMP-binding enzyme C-terminal domain IX91_18735 PF07715 TonB-dependent Receptor Plug Domain IX91_18735 PF00593 TonB dependent receptor IX91_18745 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IX91_18755 PF00072 Response regulator receiver domain IX91_18760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_18760 PF00512 His Kinase A (phospho-acceptor) domain IX91_18760 PF01627 Hpt domain IX91_18760 PF00672 HAMP domain IX91_18760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX91_18760 PF00072 Response regulator receiver domain IX91_18765 PF00440 Bacterial regulatory proteins, tetR family IX91_18765 PF13977 BetI-type transcriptional repressor, C-terminal IX91_18770 PF00171 Aldehyde dehydrogenase family IX91_18775 PF00732 GMC oxidoreductase IX91_18775 PF05199 GMC oxidoreductase IX91_18780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IX91_18785 PF00528 Binding-protein-dependent transport system inner membrane component IX91_18790 PF00005 ABC transporter IX91_18790 PF00571 CBS domain IX91_18795 PF00367 phosphotransferase system, EIIB IX91_18795 PF02378 Phosphotransferase system, EIIC IX91_18800 PF07689 KaiB domain IX91_18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_18800 PF00512 His Kinase A (phospho-acceptor) domain IX91_18805 PF00486 Transcriptional regulatory protein, C terminal IX91_18805 PF00072 Response regulator receiver domain IX91_18840 PF00171 Aldehyde dehydrogenase family IX91_18845 PF02954 Bacterial regulatory protein, Fis family IX91_18845 PF00158 Sigma-54 interaction domain IX91_18845 PF01590 GAF domain IX91_18865 PF02397 Bacterial sugar transferase IX91_18880 PF13614 AAA domain IX91_18880 PF13807 G-rich domain on putative tyrosine kinase IX91_18880 PF02706 Chain length determinant protein IX91_18885 PF02350 UDP-N-acetylglucosamine 2-epimerase IX91_18890 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IX91_18890 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IX91_18890 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IX91_18910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX91_18910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX91_18920 PF03808 Glycosyl transferase WecB/TagA/CpsF family IX91_18945 PF01451 Low molecular weight phosphotyrosine protein phosphatase IX91_18955 PF02567 Phenazine biosynthesis-like protein IX91_18960 PF01070 FMN-dependent dehydrogenase IX91_18965 PF02652 L-lactate permease IX91_18970 PF03466 LysR substrate binding domain IX91_18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_18975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_18975 PF00005 ABC transporter IX91_18985 PF13654 AAA domain IX91_18985 PF05362 Lon protease (S16) C-terminal proteolytic domain IX91_18990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX91_18990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX91_19000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_19000 PF17200 Single Cache domain 2 IX91_19000 PF00672 HAMP domain IX91_19010 PF07670 Nucleoside recognition IX91_19015 PF01037 Lrp/AsnC ligand binding domain IX91_19020 PF02780 Transketolase, C-terminal domain IX91_19020 PF02779 Transketolase, pyrimidine binding domain IX91_19020 PF00456 Transketolase, thiamine diphosphate binding domain IX91_19025 PF00923 Transaldolase/Fructose-6-phosphate aldolase IX91_19035 PF03466 LysR substrate binding domain IX91_19035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_19050 PF03466 LysR substrate binding domain IX91_19070 PF04972 BON domain IX91_19070 PF13629 Pilus formation protein N terminal region IX91_19070 PF00263 Bacterial type II and III secretion system protein IX91_19085 PF00437 Type II/IV secretion system protein IX91_19125 PF00581 Rhodanese-like domain IX91_19130 PF00672 HAMP domain IX91_19130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_19135 PF00899 ThiF family IX91_19140 PF03453 MoeA N-terminal region (domain I and II) IX91_19140 PF00994 Probable molybdopterin binding domain IX91_19140 PF03454 MoeA C-terminal region (domain IV) IX91_19145 PF01227 GTP cyclohydrolase I IX91_19150 PF03880 DbpA RNA binding domain IX91_19150 PF00271 Helicase conserved C-terminal domain IX91_19150 PF00270 DEAD/DEAH box helicase IX91_19165 PF01641 SelR domain IX91_19165 PF01625 Peptide methionine sulfoxide reductase IX91_19170 PF03222 Tryptophan/tyrosine permease family IX91_19180 PF04336 Acyl carrier protein phosphodiesterase IX91_19185 PF00271 Helicase conserved C-terminal domain IX91_19185 PF00270 DEAD/DEAH box helicase IX91_19205 PF00814 Glycoprotease family IX91_19205 PF00583 Acetyltransferase (GNAT) family IX91_19210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_19215 PF00873 AcrB/AcrD/AcrF family IX91_19225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_19225 PF12729 Four helix bundle sensory module for signal transduction IX91_19225 PF00672 HAMP domain IX91_19230 PF13419 Haloacid dehalogenase-like hydrolase IX91_19235 PF00294 pfkB family carbohydrate kinase IX91_19250 PF13419 Haloacid dehalogenase-like hydrolase IX91_19255 PF02142 MGS-like domain IX91_19260 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IX91_19265 PF00072 Response regulator receiver domain IX91_19265 PF01627 Hpt domain IX91_19265 PF00512 His Kinase A (phospho-acceptor) domain IX91_19265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_19265 PF00672 HAMP domain IX91_19280 PF00465 Iron-containing alcohol dehydrogenase IX91_19285 PF06719 AraC-type transcriptional regulator N-terminus IX91_19285 PF12833 Helix-turn-helix domain IX91_19290 PF00704 Glycosyl hydrolases family 18 IX91_19290 PF06483 Chitinase C IX91_19295 PF00483 Nucleotidyl transferase IX91_19300 PF00990 Diguanylate cyclase, GGDEF domain IX91_19300 PF05230 MASE2 domain IX91_19305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IX91_19305 PF02378 Phosphotransferase system, EIIC IX91_19310 PF00294 pfkB family carbohydrate kinase IX91_19315 PF00381 PTS HPr component phosphorylation site IX91_19315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_19320 PF00356 Bacterial regulatory proteins, lacI family IX91_19320 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IX91_19330 PF04076 Bacterial OB fold (BOF) protein IX91_19335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX91_19335 PF07685 CobB/CobQ-like glutamine amidotransferase domain IX91_19345 PF00528 Binding-protein-dependent transport system inner membrane component IX91_19350 PF00005 ABC transporter IX91_19350 PF03459 TOBE domain IX91_19360 PF00360 Phytochrome region IX91_19360 PF00990 Diguanylate cyclase, GGDEF domain IX91_19360 PF01590 GAF domain IX91_19360 PF00563 EAL domain IX91_19365 PF00990 Diguanylate cyclase, GGDEF domain IX91_19365 PF07694 5TMR of 5TMR-LYT IX91_19380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IX91_19380 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IX91_19380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IX91_19385 PF02233 NAD(P) transhydrogenase beta subunit IX91_19395 PF00072 Response regulator receiver domain IX91_19395 PF00486 Transcriptional regulatory protein, C terminal IX91_19430 PF01436 NHL repeat IX91_19430 PF00069 Protein kinase domain IX91_19430 PF08450 SMP-30/Gluconolactonase/LRE-like region IX91_19485 PF13539 D-alanyl-D-alanine carboxypeptidase IX91_19590 PF01253 Translation initiation factor SUI1 IX91_19605 PF07478 D-ala D-ala ligase C-terminus IX91_19605 PF01820 D-ala D-ala ligase N-terminus IX91_19610 PF05036 Sporulation related domain IX91_19615 PF13607 Succinyl-CoA ligase like flavodoxin domain IX91_19615 PF13380 CoA binding domain IX91_19615 PF00583 Acetyltransferase (GNAT) family IX91_19625 PF01758 Sodium Bile acid symporter family IX91_19630 PF00990 Diguanylate cyclase, GGDEF domain IX91_19630 PF00563 EAL domain IX91_19630 PF00498 FHA domain IX91_19655 PF07670 Nucleoside recognition IX91_19655 PF07662 Na+ dependent nucleoside transporter C-terminus IX91_19655 PF01773 Na+ dependent nucleoside transporter N-terminus IX91_19670 PF00194 Eukaryotic-type carbonic anhydrase IX91_19680 PF00107 Zinc-binding dehydrogenase IX91_19680 PF08240 Alcohol dehydrogenase GroES-like domain IX91_19685 PF00155 Aminotransferase class I and II IX91_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_19690 PF03466 LysR substrate binding domain IX91_19710 PF01966 HD domain IX91_19715 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IX91_19715 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IX91_19720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IX91_19725 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IX91_19725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX91_19735 PF03466 LysR substrate binding domain IX91_19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_19740 PF00593 TonB dependent receptor IX91_19740 PF07715 TonB-dependent Receptor Plug Domain IX91_19750 PF12793 Sugar transport-related sRNA regulator N-term IX91_19750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_19760 PF03061 Thioesterase superfamily IX91_19765 PF01435 Peptidase family M48 IX91_19770 PF17820 PDZ domain IX91_19770 PF02163 Peptidase family M50 IX91_19780 PF18494 Pullulanase Ins domain IX91_19780 PF11852 Domain of unknown function (DUF3372) IX91_19780 PF03714 Bacterial pullanase-associated domain IX91_19780 PF17967 Pullulanase N2 domain IX91_19780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IX91_19795 PF03741 Integral membrane protein TerC family IX91_19805 PF00149 Calcineurin-like phosphoesterase IX91_19805 PF02872 5'-nucleotidase, C-terminal domain IX91_19810 PF11398 Protein of unknown function (DUF2813) IX91_19815 PF06496 Protein of unknown function (DUF1097) IX91_19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_19820 PF03466 LysR substrate binding domain IX91_19830 PF01226 Formate/nitrite transporter IX91_19835 PF04264 YceI-like domain IX91_19840 PF01292 Prokaryotic cytochrome b561 IX91_19865 PF03606 C4-dicarboxylate anaerobic carrier IX91_19870 PF00196 Bacterial regulatory proteins, luxR family IX91_19870 PF00072 Response regulator receiver domain IX91_19875 PF07730 Histidine kinase IX91_19875 PF00672 HAMP domain IX91_19875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_19875 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IX91_19880 PF00037 4Fe-4S binding domain IX91_19880 PF12800 4Fe-4S binding domain IX91_19880 PF13187 4Fe-4S dicluster domain IX91_19890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX91_19890 PF01568 Molydopterin dinucleotide binding domain IX91_19890 PF00384 Molybdopterin oxidoreductase IX91_19895 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IX91_19900 PF03264 NapC/NirT cytochrome c family, N-terminal region IX91_19910 PF16363 GDP-mannose 4,6 dehydratase IX91_19915 PF00990 Diguanylate cyclase, GGDEF domain IX91_19915 PF03707 Bacterial signalling protein N terminal repeat IX91_19915 PF00563 EAL domain IX91_19920 PF03746 LamB/YcsF family IX91_19930 PF02626 Carboxyltransferase domain, subdomain A and B IX91_19945 PF00005 ABC transporter IX91_19950 PF13472 GDSL-like Lipase/Acylhydrolase family IX91_19955 PF12241 Trans-2-enoyl-CoA reductase catalytic region IX91_19955 PF07055 Enoyl reductase FAD binding domain IX91_19955 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IX91_19960 PF00563 EAL domain IX91_19960 PF00990 Diguanylate cyclase, GGDEF domain IX91_19960 PF00498 FHA domain IX91_19975 PF00528 Binding-protein-dependent transport system inner membrane component IX91_19980 PF00005 ABC transporter IX91_19990 PF01556 DnaJ C terminal domain IX91_19990 PF00226 DnaJ domain IX91_19990 PF00684 DnaJ central domain IX91_20015 PF12462 DNA helicase IV / RNA helicase N terminal IX91_20015 PF00580 UvrD/REP helicase N-terminal domain IX91_20015 PF13361 UvrD-like helicase C-terminal domain IX91_20020 PF12805 FUSC-like inner membrane protein yccS IX91_20040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_20040 PF00512 His Kinase A (phospho-acceptor) domain IX91_20040 PF09308 LuxQ, periplasmic IX91_20040 PF00072 Response regulator receiver domain IX91_20045 PF13407 Periplasmic binding protein domain IX91_20055 PF01541 GIY-YIG catalytic domain IX91_20080 PF00072 Response regulator receiver domain IX91_20085 PF00691 OmpA family IX91_20085 PF05736 OprF membrane domain IX91_20095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IX91_20095 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IX91_20100 PF00293 NUDIX domain IX91_20105 PF08443 RimK-like ATP-grasp domain IX91_20105 PF18030 RimK PreATP-grasp domain IX91_20110 PF00155 Aminotransferase class I and II IX91_20120 PF03477 ATP cone domain IX91_20120 PF13597 Anaerobic ribonucleoside-triphosphate reductase IX91_20135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_20140 PF00873 AcrB/AcrD/AcrF family IX91_20150 PF04143 Sulphur transport IX91_20165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IX91_20165 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_20185 PF05547 Immune inhibitor A peptidase M6 IX91_20185 PF00801 PKD domain IX91_20190 PF01117 Aerolysin toxin IX91_20190 PF03440 Aerolysin/Pertussis toxin (APT) domain IX91_20195 PF00657 GDSL-like Lipase/Acylhydrolase IX91_20200 PF07690 Major Facilitator Superfamily IX91_20205 PF01177 Asp/Glu/Hydantoin racemase IX91_20210 PF00561 alpha/beta hydrolase fold IX91_20210 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus IX91_20220 PF00108 Thiolase, N-terminal domain IX91_20220 PF02803 Thiolase, C-terminal domain IX91_20225 PF00106 short chain dehydrogenase IX91_20230 PF00873 AcrB/AcrD/AcrF family IX91_20240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_20245 PF00440 Bacterial regulatory proteins, tetR family IX91_20245 PF08361 MAATS-type transcriptional repressor, C-terminal region IX91_20270 PF09905 DNA-binding protein VF530 IX91_20295 PF02798 Glutathione S-transferase, N-terminal domain IX91_20295 PF00043 Glutathione S-transferase, C-terminal domain IX91_20300 PF01810 LysE type translocator IX91_20320 PF00293 NUDIX domain IX91_20320 PF13344 Haloacid dehalogenase-like hydrolase IX91_20335 PF13302 Acetyltransferase (GNAT) domain IX91_20355 PF08241 Methyltransferase domain IX91_20380 PF13333 Integrase core domain IX91_20380 PF00665 Integrase core domain IX91_20380 PF13276 HTH-like domain IX91_20455 PF13495 Phage integrase, N-terminal SAM-like domain IX91_20455 PF00589 Phage integrase family IX91_20460 PF00871 Acetokinase family IX91_20465 PF03707 Bacterial signalling protein N terminal repeat IX91_20465 PF00563 EAL domain IX91_20465 PF00990 Diguanylate cyclase, GGDEF domain IX91_20470 PF00593 TonB dependent receptor IX91_20470 PF07715 TonB-dependent Receptor Plug Domain IX91_20475 PF12833 Helix-turn-helix domain IX91_20480 PF13609 Gram-negative porin IX91_20485 PF13411 MerR HTH family regulatory protein IX91_20490 PF00005 ABC transporter IX91_20495 PF01032 FecCD transport family IX91_20500 PF01032 FecCD transport family IX91_20520 PF00196 Bacterial regulatory proteins, luxR family IX91_20520 PF00072 Response regulator receiver domain IX91_20530 PF00990 Diguanylate cyclase, GGDEF domain IX91_20530 PF00563 EAL domain IX91_20540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_20540 PF00005 ABC transporter IX91_20545 PF00528 Binding-protein-dependent transport system inner membrane component IX91_20545 PF12911 N-terminal TM domain of oligopeptide transport permease C IX91_20550 PF00528 Binding-protein-dependent transport system inner membrane component IX91_20555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_20560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_20560 PF08447 PAS fold IX91_20565 PF00990 Diguanylate cyclase, GGDEF domain IX91_20575 PF00589 Phage integrase family IX91_20575 PF13356 Arm DNA-binding domain IX91_20595 PF02384 N-6 DNA Methylase IX91_20600 PF00239 Resolvase, N terminal domain IX91_20600 PF02796 Helix-turn-helix domain of resolvase IX91_20615 PF05930 Prophage CP4-57 regulatory protein (AlpA) IX91_20625 PF01926 50S ribosome-binding GTPase IX91_20630 PF07683 Cobalamin synthesis protein cobW C-terminal domain IX91_20630 PF02492 CobW/HypB/UreG, nucleotide-binding domain IX91_20635 PF00654 Voltage gated chloride channel IX91_20645 PF00155 Aminotransferase class I and II IX91_20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_20650 PF00072 Response regulator receiver domain IX91_20655 PF13476 AAA domain IX91_20660 PF00149 Calcineurin-like phosphoesterase IX91_20660 PF12320 Type 5 capsule protein repressor C-terminal domain IX91_20665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IX91_20665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IX91_20670 PF00085 Thioredoxin IX91_20675 PF07690 Major Facilitator Superfamily IX91_20680 PF11756 Nitrous oxide-stimulated promoter IX91_20710 PF13806 Rieske-like [2Fe-2S] domain IX91_20715 PF18267 Rubredoxin NAD+ reductase C-terminal domain IX91_20715 PF13806 Rieske-like [2Fe-2S] domain IX91_20715 PF07992 Pyridine nucleotide-disulphide oxidoreductase IX91_20715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IX91_20715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IX91_20715 PF04324 BFD-like [2Fe-2S] binding domain IX91_20720 PF00005 ABC transporter IX91_20725 PF00528 Binding-protein-dependent transport system inner membrane component IX91_20730 PF00005 ABC transporter IX91_20735 PF03861 ANTAR domain IX91_20735 PF00072 Response regulator receiver domain IX91_20740 PF02885 Glycosyl transferase family, helical bundle domain IX91_20740 PF00591 Glycosyl transferase family, a/b domain IX91_20745 PF10414 Sirohaem synthase dimerisation region IX91_20745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IX91_20750 PF01568 Molydopterin dinucleotide binding domain IX91_20750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IX91_20750 PF00384 Molybdopterin oxidoreductase IX91_20775 PF09330 D-lactate dehydrogenase, membrane binding IX91_20775 PF01565 FAD binding domain IX91_20780 PF03466 LysR substrate binding domain IX91_20780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_20790 PF04237 YjbR IX91_20800 PF00672 HAMP domain IX91_20800 PF02743 Cache domain IX91_20800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_20810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX91_20810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX91_20815 PF00378 Enoyl-CoA hydratase/isomerase IX91_20820 PF00378 Enoyl-CoA hydratase/isomerase IX91_20825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX91_20825 PF02770 Acyl-CoA dehydrogenase, middle domain IX91_20825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX91_20830 PF00171 Aldehyde dehydrogenase family IX91_20835 PF00108 Thiolase, N-terminal domain IX91_20835 PF02803 Thiolase, C-terminal domain IX91_20840 PF09278 MerR, DNA binding IX91_20840 PF00376 MerR family regulatory protein IX91_20845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IX91_20845 PF02770 Acyl-CoA dehydrogenase, middle domain IX91_20845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IX91_20850 PF01039 Carboxyl transferase domain IX91_20855 PF00378 Enoyl-CoA hydratase/isomerase IX91_20860 PF00682 HMGL-like IX91_20865 PF01339 CheB methylesterase IX91_20865 PF00072 Response regulator receiver domain IX91_20870 PF05230 MASE2 domain IX91_20870 PF00990 Diguanylate cyclase, GGDEF domain IX91_20895 PF00990 Diguanylate cyclase, GGDEF domain IX91_20895 PF17158 Membrane-associated sensor, integral membrane domain IX91_20900 PF17200 Single Cache domain 2 IX91_20900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_20900 PF00672 HAMP domain IX91_20915 PF01235 Sodium:alanine symporter family IX91_20920 PF00676 Dehydrogenase E1 component IX91_20925 PF02780 Transketolase, C-terminal domain IX91_20925 PF02779 Transketolase, pyrimidine binding domain IX91_20930 PF00364 Biotin-requiring enzyme IX91_20930 PF02817 e3 binding domain IX91_20930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IX91_20935 PF01012 Electron transfer flavoprotein domain IX91_20935 PF00766 Electron transfer flavoprotein FAD-binding domain IX91_20940 PF01012 Electron transfer flavoprotein domain IX91_20950 PF00672 HAMP domain IX91_20950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_20950 PF17200 Single Cache domain 2 IX91_20960 PF02028 BCCT, betaine/carnitine/choline family transporter IX91_20970 PF08774 VRR-NUC domain IX91_20970 PF18081 Fanconi anemia-associated nuclease SAP domain IX91_20975 PF00672 HAMP domain IX91_20975 PF00909 Ammonium Transporter Family IX91_20995 PF01268 Formate--tetrahydrofolate ligase IX91_21005 PF00929 Exonuclease IX91_21005 PF07733 Bacterial DNA polymerase III alpha NTPase domain IX91_21005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IX91_21005 PF02811 PHP domain IX91_21005 PF14579 Helix-hairpin-helix motif IX91_21010 PF02028 BCCT, betaine/carnitine/choline family transporter IX91_21015 PF01047 MarR family IX91_21020 PF00990 Diguanylate cyclase, GGDEF domain IX91_21020 PF08448 PAS fold IX91_21025 PF01037 Lrp/AsnC ligand binding domain IX91_21040 PF07690 Major Facilitator Superfamily IX91_21045 PF05762 VWA domain containing CoxE-like protein IX91_21050 PF12592 Protein of unknown function (DUF3763) IX91_21050 PF17868 AAA lid domain IX91_21050 PF07728 AAA domain (dynein-related subfamily) IX91_21055 PF00293 NUDIX domain IX91_21060 PF01212 Beta-eliminating lyase IX91_21065 PF00034 Cytochrome c IX91_21070 PF02872 5'-nucleotidase, C-terminal domain IX91_21070 PF00149 Calcineurin-like phosphoesterase IX91_21080 PF01584 CheW-like domain IX91_21080 PF00072 Response regulator receiver domain IX91_21085 PF00990 Diguanylate cyclase, GGDEF domain IX91_21105 PF03315 Serine dehydratase beta chain IX91_21105 PF03313 Serine dehydratase alpha chain IX91_21110 PF03466 LysR substrate binding domain IX91_21110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_21115 PF01266 FAD dependent oxidoreductase IX91_21120 PF00246 Zinc carboxypeptidase IX91_21120 PF18027 Cytosolic carboxypeptidase N-terminal domain IX91_21140 PF00392 Bacterial regulatory proteins, gntR family IX91_21140 PF07702 UTRA domain IX91_21145 PF00528 Binding-protein-dependent transport system inner membrane component IX91_21150 PF00005 ABC transporter IX91_21165 PF00266 Aminotransferase class-V IX91_21175 PF13419 Haloacid dehalogenase-like hydrolase IX91_21200 PF13419 Haloacid dehalogenase-like hydrolase IX91_21205 PF03466 LysR substrate binding domain IX91_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_21220 PF00465 Iron-containing alcohol dehydrogenase IX91_21230 PF03795 YCII-related domain IX91_21235 PF04542 Sigma-70 region 2 IX91_21235 PF08281 Sigma-70, region 4 IX91_21240 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH IX91_21245 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IX91_21260 PF12843 Putative quorum-sensing-regulated virulence factor IX91_21275 PF18416 N-acetylglucosamine binding protein domain 2 IX91_21275 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading IX91_21280 PF00768 D-alanyl-D-alanine carboxypeptidase IX91_21280 PF07943 Penicillin-binding protein 5, C-terminal domain IX91_21295 PF03889 Alternative ribosome-rescue factor A IX91_21300 PF00313 'Cold-shock' DNA-binding domain IX91_21315 PF00175 Oxidoreductase NAD-binding domain IX91_21315 PF00042 Globin IX91_21315 PF00970 Oxidoreductase FAD-binding domain IX91_21320 PF00158 Sigma-54 interaction domain IX91_21320 PF01590 GAF domain IX91_21335 PF01554 MatE IX91_21345 PF00892 EamA-like transporter family IX91_21350 PF00462 Glutaredoxin IX91_21365 PF07690 Major Facilitator Superfamily IX91_21370 PF03466 LysR substrate binding domain IX91_21370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_21375 PF00990 Diguanylate cyclase, GGDEF domain IX91_21375 PF13188 PAS domain IX91_21375 PF03707 Bacterial signalling protein N terminal repeat IX91_21375 PF00563 EAL domain IX91_21385 PF01467 Cytidylyltransferase-like IX91_21390 PF02540 NAD synthase IX91_21410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_21410 PF02743 Cache domain IX91_21410 PF00672 HAMP domain IX91_21415 PF00128 Alpha amylase, catalytic domain IX91_21440 PF00990 Diguanylate cyclase, GGDEF domain IX91_21440 PF17151 Periplasmic sensor domain IX91_21445 PF03473 MOSC domain IX91_21445 PF03476 MOSC N-terminal beta barrel domain IX91_21445 PF03476 MOSC N-terminal beta barrel domain IX91_21445 PF00111 2Fe-2S iron-sulfur cluster binding domain IX91_21445 PF00111 2Fe-2S iron-sulfur cluster binding domain IX91_21445 PF03473 MOSC domain IX91_21450 PF01679 Proteolipid membrane potential modulator IX91_21460 PF00990 Diguanylate cyclase, GGDEF domain IX91_21465 PF01717 Cobalamin-independent synthase, Catalytic domain IX91_21465 PF08267 Cobalamin-independent synthase, N-terminal domain IX91_21485 PF01638 HxlR-like helix-turn-helix IX91_21495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_21495 PF03466 LysR substrate binding domain IX91_21515 PF02743 Cache domain IX91_21515 PF00672 HAMP domain IX91_21515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_21520 PF17863 AAA lid domain IX91_21520 PF07726 ATPase family associated with various cellular activities (AAA) IX91_21525 PF01882 Protein of unknown function DUF58 IX91_21535 PF07584 Aerotolerance regulator N-terminal IX91_21535 PF00092 von Willebrand factor type A domain IX91_21540 PF07584 Aerotolerance regulator N-terminal IX91_21540 PF13519 von Willebrand factor type A domain IX91_21565 PF00892 EamA-like transporter family IX91_21570 PF02566 OsmC-like protein IX91_21575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX91_21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_21585 PF03466 LysR substrate binding domain IX91_21590 PF13404 AsnC-type helix-turn-helix domain IX91_21590 PF01037 Lrp/AsnC ligand binding domain IX91_21595 PF13520 Amino acid permease IX91_21605 PF13230 Glutamine amidotransferases class-II IX91_21610 PF00155 Aminotransferase class I and II IX91_21610 PF00392 Bacterial regulatory proteins, gntR family IX91_21630 PF13533 Biotin-lipoyl like IX91_21635 PF01769 Divalent cation transporter IX91_21635 PF00571 CBS domain IX91_21635 PF03448 MgtE intracellular N domain IX91_21640 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IX91_21645 PF07969 Amidohydrolase family IX91_21650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IX91_21655 PF00512 His Kinase A (phospho-acceptor) domain IX91_21655 PF01627 Hpt domain IX91_21655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_21655 PF00072 Response regulator receiver domain IX91_21655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IX91_21655 PF00672 HAMP domain IX91_21670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IX91_21670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IX91_21700 PF01569 PAP2 superfamily IX91_21720 PF03466 LysR substrate binding domain IX91_21720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_21725 PF03466 LysR substrate binding domain IX91_21725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_21775 PF00873 AcrB/AcrD/AcrF family IX91_21805 PF00528 Binding-protein-dependent transport system inner membrane component IX91_21810 PF14785 Maltose transport system permease protein MalF P2 domain IX91_21810 PF00528 Binding-protein-dependent transport system inner membrane component IX91_21815 PF01547 Bacterial extracellular solute-binding protein IX91_21820 PF08402 TOBE domain IX91_21820 PF00005 ABC transporter IX91_21825 PF12833 Helix-turn-helix domain IX91_21830 PF02056 Family 4 glycosyl hydrolase IX91_21830 PF11975 Family 4 glycosyl hydrolase C-terminal domain IX91_21845 PF01145 SPFH domain / Band 7 family IX91_21845 PF16200 C-terminal region of band_7 IX91_21855 PF12849 PBP superfamily domain IX91_21870 PF08206 Ribonuclease B OB domain IX91_21870 PF00773 RNB domain IX91_21870 PF00575 S1 RNA binding domain IX91_21880 PF03880 DbpA RNA binding domain IX91_21880 PF00271 Helicase conserved C-terminal domain IX91_21880 PF00270 DEAD/DEAH box helicase IX91_21885 PF00270 DEAD/DEAH box helicase IX91_21885 PF00271 Helicase conserved C-terminal domain IX91_21895 PF17969 L,D-transpeptidase C-terminal domain IX91_21895 PF03734 L,D-transpeptidase catalytic domain IX91_21895 PF01476 LysM domain IX91_21900 PF03441 FAD binding domain of DNA photolyase IX91_21900 PF00875 DNA photolyase IX91_21905 PF13411 MerR HTH family regulatory protein IX91_21910 PF08349 Protein of unknown function (DUF1722) IX91_21915 PF01048 Phosphorylase superfamily IX91_21930 PF00990 Diguanylate cyclase, GGDEF domain IX91_21935 PF11742 Protein of unknown function (DUF3302) IX91_21940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IX91_21940 PF00529 HlyD membrane-fusion protein of T1SS IX91_21950 PF00005 ABC transporter IX91_21950 PF12558 ATP-binding cassette cobalt transporter IX91_21960 PF06942 GlpM protein IX91_21975 PF00583 Acetyltransferase (GNAT) family IX91_21980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_21980 PF12729 Four helix bundle sensory module for signal transduction IX91_21980 PF00672 HAMP domain IX91_22000 PF01037 Lrp/AsnC ligand binding domain IX91_22010 PF00474 Sodium:solute symporter family IX91_22020 PF00171 Aldehyde dehydrogenase family IX91_22020 PF14850 DNA-binding domain of Proline dehydrogenase IX91_22020 PF01619 Proline dehydrogenase IX91_22020 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IX91_22025 PF12833 Helix-turn-helix domain IX91_22035 PF03781 Sulfatase-modifying factor enzyme 1 IX91_22050 PF00529 HlyD membrane-fusion protein of T1SS IX91_22065 PF00664 ABC transporter transmembrane region IX91_22065 PF00005 ABC transporter IX91_22065 PF03412 Peptidase C39 family IX91_22070 PF08329 Chitinase A, N-terminal domain IX91_22070 PF00704 Glycosyl hydrolases family 18 IX91_22075 PF01212 Beta-eliminating lyase IX91_22080 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IX91_22085 PF01966 HD domain IX91_22090 PF13302 Acetyltransferase (GNAT) domain IX91_22100 PF02630 SCO1/SenC IX91_22110 PF03193 RsgA GTPase IX91_22115 PF00375 Sodium:dicarboxylate symporter family IX91_22140 PF00106 short chain dehydrogenase IX91_22145 PF03466 LysR substrate binding domain IX91_22145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_22150 PF00171 Aldehyde dehydrogenase family IX91_22155 PF02683 Cytochrome C biogenesis protein transmembrane region IX91_22155 PF11412 Disulphide bond corrector protein DsbC IX91_22160 PF02424 ApbE family IX91_22210 PF00437 Type II/IV secretion system protein IX91_22215 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IX91_22225 PF13629 Pilus formation protein N terminal region IX91_22225 PF00263 Bacterial type II and III secretion system protein IX91_22225 PF04972 BON domain IX91_22255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_22255 PF12793 Sugar transport-related sRNA regulator N-term IX91_22265 PF00528 Binding-protein-dependent transport system inner membrane component IX91_22270 PF00005 ABC transporter IX91_22270 PF00571 CBS domain IX91_22280 PF00793 DAHP synthetase I family IX91_22285 PF00005 ABC transporter IX91_22290 PF00528 Binding-protein-dependent transport system inner membrane component IX91_22295 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_22300 PF00528 Binding-protein-dependent transport system inner membrane component IX91_22310 PF01040 UbiA prenyltransferase family IX91_22315 PF02628 Cytochrome oxidase assembly protein IX91_22335 PF00510 Cytochrome c oxidase subunit III IX91_22340 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IX91_22345 PF00115 Cytochrome C and Quinol oxidase polypeptide I IX91_22350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IX91_22350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IX91_22355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IX91_22355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IX91_22355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IX91_22355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IX91_22365 PF00578 AhpC/TSA family IX91_22370 PF11412 Disulphide bond corrector protein DsbC IX91_22370 PF02683 Cytochrome C biogenesis protein transmembrane region IX91_22380 PF00583 Acetyltransferase (GNAT) family IX91_22385 PF01810 LysE type translocator IX91_22410 PF01557 Fumarylacetoacetate (FAA) hydrolase family IX91_22420 PF00593 TonB dependent receptor IX91_22420 PF07715 TonB-dependent Receptor Plug Domain IX91_22435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_22435 PF03466 LysR substrate binding domain IX91_22440 PF01546 Peptidase family M20/M25/M40 IX91_22440 PF07687 Peptidase dimerisation domain IX91_22445 PF07670 Nucleoside recognition IX91_22450 PF07670 Nucleoside recognition IX91_22455 PF03600 Citrate transporter IX91_22465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IX91_22465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IX91_22470 PF00730 HhH-GPD superfamily base excision DNA repair protein IX91_22470 PF06029 AlkA N-terminal domain IX91_22480 PF02525 Flavodoxin-like fold IX91_22485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_22485 PF03466 LysR substrate binding domain IX91_22495 PF07148 Maltose operon periplasmic protein precursor (MalM) IX91_22500 PF02264 LamB porin IX91_22505 PF00128 Alpha amylase, catalytic domain IX91_22505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IX91_22510 PF00990 Diguanylate cyclase, GGDEF domain IX91_22510 PF17158 Membrane-associated sensor, integral membrane domain IX91_22515 PF01979 Amidohydrolase family IX91_22520 PF07690 Major Facilitator Superfamily IX91_22535 PF03466 LysR substrate binding domain IX91_22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_22540 PF00155 Aminotransferase class I and II IX91_22545 PF00497 Bacterial extracellular solute-binding proteins, family 3 IX91_22560 PF03992 Antibiotic biosynthesis monooxygenase IX91_22570 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IX91_22575 PF03441 FAD binding domain of DNA photolyase IX91_22575 PF00875 DNA photolyase IX91_22600 PF12833 Helix-turn-helix domain IX91_22600 PF02311 AraC-like ligand binding domain IX91_22605 PF00158 Sigma-54 interaction domain IX91_22605 PF01590 GAF domain IX91_22615 PF01569 PAP2 superfamily IX91_22620 PF03063 Prismane/CO dehydrogenase family IX91_22625 PF00111 2Fe-2S iron-sulfur cluster binding domain IX91_22625 PF00970 Oxidoreductase FAD-binding domain IX91_22625 PF00175 Oxidoreductase NAD-binding domain IX91_22635 PF00155 Aminotransferase class I and II IX91_22635 PF00392 Bacterial regulatory proteins, gntR family IX91_22640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_22640 PF12793 Sugar transport-related sRNA regulator N-term IX91_22675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_22675 PF03466 LysR substrate binding domain IX91_22690 PF00873 AcrB/AcrD/AcrF family IX91_22710 PF04116 Fatty acid hydroxylase superfamily IX91_22715 PF00072 Response regulator receiver domain IX91_22715 PF00486 Transcriptional regulatory protein, C terminal IX91_22720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_22720 PF08521 Two-component sensor kinase N-terminal IX91_22720 PF00512 His Kinase A (phospho-acceptor) domain IX91_22730 PF00083 Sugar (and other) transporter IX91_22735 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IX91_22740 PF01047 MarR family IX91_22775 PF00764 Arginosuccinate synthase IX91_22780 PF03466 LysR substrate binding domain IX91_22780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_22785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_22785 PF12793 Sugar transport-related sRNA regulator N-term IX91_22790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IX91_22790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IX91_22805 PF00583 Acetyltransferase (GNAT) family IX91_22820 PF12945 Flagellar protein YcgR IX91_22820 PF07238 PilZ domain IX91_22825 PF03616 Sodium/glutamate symporter IX91_22845 PF00005 ABC transporter IX91_22850 PF01497 Periplasmic binding protein IX91_22855 PF01032 FecCD transport family IX91_22865 PF00593 TonB dependent receptor IX91_22865 PF07715 TonB-dependent Receptor Plug Domain IX91_22870 PF00962 Adenosine/AMP deaminase IX91_22885 PF00005 ABC transporter IX91_22885 PF00664 ABC transporter transmembrane region IX91_22900 PF02678 Pirin IX91_22900 PF05726 Pirin C-terminal cupin domain IX91_22910 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_22915 PF00561 alpha/beta hydrolase fold IX91_22950 PF00486 Transcriptional regulatory protein, C terminal IX91_22965 PF00472 RF-1 domain IX91_22980 PF02806 Alpha amylase, C-terminal all-beta domain IX91_22980 PF00128 Alpha amylase, catalytic domain IX91_22980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IX91_22985 PF02446 4-alpha-glucanotransferase IX91_22990 PF00343 Carbohydrate phosphorylase IX91_22995 PF17874 MalT-like TPR region IX91_22995 PF00196 Bacterial regulatory proteins, luxR family IX91_23020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IX91_23020 PF00367 phosphotransferase system, EIIB IX91_23020 PF02378 Phosphotransferase system, EIIC IX91_23025 PF01546 Peptidase family M20/M25/M40 IX91_23030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IX91_23035 PF02779 Transketolase, pyrimidine binding domain IX91_23035 PF02780 Transketolase, C-terminal domain IX91_23035 PF00456 Transketolase, thiamine diphosphate binding domain IX91_23040 PF00923 Transaldolase/Fructose-6-phosphate aldolase IX91_23045 PF13419 Haloacid dehalogenase-like hydrolase IX91_23050 PF00465 Iron-containing alcohol dehydrogenase IX91_23065 PF08220 DeoR-like helix-turn-helix domain IX91_23065 PF00455 DeoR C terminal sensor domain IX91_23070 PF10928 Protein of unknown function (DUF2810) IX91_23075 PF00132 Bacterial transferase hexapeptide (six repeats) IX91_23090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_23090 PF17200 Single Cache domain 2 IX91_23090 PF00672 HAMP domain IX91_23095 PF00171 Aldehyde dehydrogenase family IX91_23100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX91_23105 PF07690 Major Facilitator Superfamily IX91_23115 PF03466 LysR substrate binding domain IX91_23115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_23125 PF02627 Carboxymuconolactone decarboxylase family IX91_23130 PF01979 Amidohydrolase family IX91_23135 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IX91_23140 PF00939 Sodium:sulfate symporter transmembrane region IX91_23145 PF12697 Alpha/beta hydrolase family IX91_23165 PF01124 MAPEG family IX91_23170 PF08281 Sigma-70, region 4 IX91_23170 PF04542 Sigma-70 region 2 IX91_23185 PF00117 Glutamine amidotransferase class-I IX91_23185 PF00958 GMP synthase C terminal domain IX91_23190 PF01551 Peptidase family M23 IX91_23190 PF01476 LysM domain IX91_23190 PF08525 Opacity-associated protein A N-terminal motif IX91_23220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_23220 PF03466 LysR substrate binding domain IX91_23245 PF01569 PAP2 superfamily IX91_23250 PF00072 Response regulator receiver domain IX91_23250 PF00990 Diguanylate cyclase, GGDEF domain IX91_23255 PF03070 TENA/THI-4/PQQC family IX91_23260 PF09084 NMT1/THI5 like IX91_23265 PF00528 Binding-protein-dependent transport system inner membrane component IX91_23270 PF00005 ABC transporter IX91_23275 PF08543 Phosphomethylpyrimidine kinase IX91_23285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_23285 PF03466 LysR substrate binding domain IX91_23305 PF03717 Penicillin-binding Protein dimerisation domain IX91_23305 PF00905 Penicillin binding protein transpeptidase domain IX91_23345 PF01979 Amidohydrolase family IX91_23360 PF00589 Phage integrase family IX91_23360 PF02899 Phage integrase, N-terminal SAM-like domain IX91_23370 PF00232 Glycosyl hydrolase family 1 IX91_23375 PF00582 Universal stress protein family IX91_23380 PF00881 Nitroreductase family IX91_23390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_23390 PF03466 LysR substrate binding domain IX91_23395 PF07969 Amidohydrolase family IX91_23425 PF04013 Putative SAM-dependent RNA methyltransferase IX91_23430 PF02595 Glycerate kinase family IX91_23435 PF02447 GntP family permease IX91_23440 PF13556 PucR C-terminal helix-turn-helix domain IX91_23440 PF05651 Putative sugar diacid recognition IX91_23440 PF17853 GGDEF-like domain IX91_23445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IX91_23445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IX91_23450 PF01261 Xylose isomerase-like TIM barrel IX91_23455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX91_23455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX91_23455 PF00205 Thiamine pyrophosphate enzyme, central domain IX91_23460 PF01274 Malate synthase IX91_23470 PF01047 MarR family IX91_23480 PF02586 SOS response associated peptidase (SRAP) IX91_23495 PF00892 EamA-like transporter family IX91_23515 PF02001 Protein of unknown function DUF134 IX91_23520 PF01406 tRNA synthetases class I (C) catalytic domain IX91_23530 PF12464 Maltose acetyltransferase IX91_23530 PF14602 Hexapeptide repeat of succinyl-transferase IX91_23535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_23535 PF03466 LysR substrate binding domain IX91_23540 PF08803 Putative mono-oxygenase ydhR IX91_23555 PF01261 Xylose isomerase-like TIM barrel IX91_23560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IX91_23570 PF00596 Class II Aldolase and Adducin N-terminal domain IX91_23575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IX91_23580 PF03611 PTS system sugar-specific permease component IX91_23585 PF08220 DeoR-like helix-turn-helix domain IX91_23585 PF00455 DeoR C terminal sensor domain IX91_23605 PF03466 LysR substrate binding domain IX91_23605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_23620 PF01709 Transcriptional regulator IX91_23635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_23635 PF00005 ABC transporter IX91_23640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IX91_23640 PF00005 ABC transporter IX91_23660 PF13614 AAA domain IX91_23665 PF02195 ParB-like nuclease domain IX91_23665 PF08775 ParB family IX91_23670 PF07690 Major Facilitator Superfamily IX91_23675 PF01212 Beta-eliminating lyase IX91_23690 PF03466 LysR substrate binding domain IX91_23690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_23705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IX91_23710 PF01161 Phosphatidylethanolamine-binding protein IX91_23715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IX91_23730 PF03222 Tryptophan/tyrosine permease family IX91_23790 PF10431 C-terminal, D2-small domain, of ClpB protein IX91_23790 PF17871 AAA lid domain IX91_23790 PF00004 ATPase family associated with various cellular activities (AAA) IX91_23790 PF07724 AAA domain (Cdc48 subfamily) IX91_23795 PF01820 D-ala D-ala ligase N-terminus IX91_23795 PF07478 D-ala D-ala ligase C-terminus IX91_23815 PF16697 Inner membrane component of T3SS, cytoplasmic domain IX91_23850 PF04717 Type VI secretion system, phage-baseplate injector IX91_23850 PF16671 Actin cross-linking domain IX91_23885 PF00486 Transcriptional regulatory protein, C terminal IX91_23905 PF08534 Redoxin IX91_23910 PF00171 Aldehyde dehydrogenase family IX91_23925 PF01966 HD domain IX91_23925 PF11871 Domain of unknown function (DUF3391) IX91_23975 PF13417 Glutathione S-transferase, N-terminal domain IX91_23995 PF03466 LysR substrate binding domain IX91_23995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_24020 PF08534 Redoxin IX91_24025 PF08534 Redoxin IX91_24035 PF01546 Peptidase family M20/M25/M40 IX91_24035 PF07687 Peptidase dimerisation domain IX91_24040 PF08240 Alcohol dehydrogenase GroES-like domain IX91_24040 PF00107 Zinc-binding dehydrogenase IX91_24050 PF01842 ACT domain IX91_24050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IX91_24050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IX91_24055 PF00668 Condensation domain IX91_24055 PF00550 Phosphopantetheine attachment site IX91_24055 PF13193 AMP-binding enzyme C-terminal domain IX91_24055 PF00501 AMP-binding enzyme IX91_24070 PF00285 Citrate synthase, C-terminal domain IX91_24075 PF00694 Aconitase C-terminal domain IX91_24075 PF00330 Aconitase family (aconitate hydratase) IX91_24095 PF13378 Enolase C-terminal domain-like IX91_24095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IX91_24135 PF00583 Acetyltransferase (GNAT) family IX91_24150 PF02463 RecF/RecN/SMC N terminal domain IX91_24180 PF07676 WD40-like Beta Propeller Repeat IX91_24180 PF03572 Peptidase family S41 IX91_24180 PF14684 Tricorn protease C1 domain IX91_24180 PF14685 Tricorn protease PDZ domain IX91_24215 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer IX91_24225 PF06834 TraU protein IX91_24245 PF01048 Phosphorylase superfamily IX91_24250 PF04973 Nicotinamide mononucleotide transporter IX91_24255 PF05193 Peptidase M16 inactive domain IX91_24255 PF00675 Insulinase (Peptidase family M16) IX91_24265 PF13657 HipA N-terminal domain IX91_24265 PF07804 HipA-like C-terminal domain IX91_24270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_24270 PF07689 KaiB domain IX91_24270 PF00512 His Kinase A (phospho-acceptor) domain IX91_24275 PF00486 Transcriptional regulatory protein, C terminal IX91_24275 PF00072 Response regulator receiver domain IX91_24305 PF00672 HAMP domain IX91_24305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IX91_24305 PF02743 Cache domain IX91_24315 PF00529 HlyD membrane-fusion protein of T1SS IX91_24320 PF00005 ABC transporter IX91_24320 PF00664 ABC transporter transmembrane region IX91_24325 PF00005 ABC transporter IX91_24325 PF00664 ABC transporter transmembrane region IX91_24360 PF00072 Response regulator receiver domain IX91_24360 PF00486 Transcriptional regulatory protein, C terminal IX91_24365 PF00512 His Kinase A (phospho-acceptor) domain IX91_24365 PF00672 HAMP domain IX91_24365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_24370 PF06123 Inner membrane protein CreD IX91_24385 PF03466 LysR substrate binding domain IX91_24385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IX91_24440 PF00664 ABC transporter transmembrane region IX91_24440 PF03412 Peptidase C39 family IX91_24440 PF00005 ABC transporter IX91_24445 PF02311 AraC-like ligand binding domain IX91_24445 PF12833 Helix-turn-helix domain IX91_24460 PF04002 RadC-like JAB domain IX91_24505 PF01575 MaoC like domain IX91_24520 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IX91_24580 PF13195 Protein of unknown function (DUF4011) IX91_24580 PF13087 AAA domain IX91_24580 PF13086 AAA domain IX91_24580 PF13195 Protein of unknown function (DUF4011) IX91_24580 PF13087 AAA domain IX91_24580 PF13086 AAA domain IX91_24585 PF06271 RDD family IX91_24595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IX91_24595 PF00205 Thiamine pyrophosphate enzyme, central domain IX91_24595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IX91_24625 PF16295 Tetracyclin repressor-like, C-terminal domain IX91_24625 PF00440 Bacterial regulatory proteins, tetR family IX91_24645 PF00199 Catalase IX91_24645 PF06628 Catalase-related immune-responsive IX91_24660 PF00464 Serine hydroxymethyltransferase IX91_24670 PF00155 Aminotransferase class I and II IX91_24985 PF00072 Response regulator receiver domain IX91_24985 PF01339 CheB methylesterase IX91_25025 PF00436 Single-strand binding protein family IX91_25060 PF12556 Cobaltochelatase CobS subunit N terminal IX91_25060 PF08406 CbbQ/NirQ/NorQ C-terminal IX91_25060 PF07728 AAA domain (dynein-related subfamily) IX91_25075 PF06213 Cobalamin biosynthesis protein CobT IX91_25075 PF11775 Cobalamin biosynthesis protein CobT VWA domain IX91_25290 PF02796 Helix-turn-helix domain of resolvase IX91_25290 PF00239 Resolvase, N terminal domain IX91_25305 PF00809 Pterin binding enzyme IX91_25345 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IX91_25355 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IX91_25360 PF01636 Phosphotransferase enzyme family IX91_25385 PF00565 Staphylococcal nuclease homologue IX91_25390 PF08378 Nuclease-related domain IX91_25430 PF00072 Response regulator receiver domain IX91_25430 PF01627 Hpt domain IX91_25430 PF00512 His Kinase A (phospho-acceptor) domain IX91_25430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IX91_25460 PF13614 AAA domain IX91_25465 PF13614 AAA domain IX91_25510 PF04002 RadC-like JAB domain IX91_25535 PF08751 TrwC relaxase IX91_25535 PF18272 single-stranded DNA binding TraI N-terminal subdomain IX91_25535 PF18340 DNA relaxase TraI 2B/2B-like domain IX91_25535 PF07057 DNA helicase TraI IX91_25545 PF12615 F sex factor protein N terminal IX91_25545 PF10412 Type IV secretion-system coupling protein DNA-binding domain IX91_25590 PF06986 Type-1V conjugative transfer system mating pair stabilisation IX91_25605 PF06834 TraU protein IX91_25620 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer IX91_25670 PF01381 Helix-turn-helix IX91_25720 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IX91_25915 PF00437 Type II/IV secretion system protein IX91_25930 PF07655 Secretin N-terminal domain IX91_25930 PF00263 Bacterial type II and III secretion system protein IX91_25965 PF00437 Type II/IV secretion system protein IX91_25970 PF03743 Bacterial conjugation TrbI-like protein IX91_25980 PF04335 VirB8 protein IX91_25995 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IX91_26020 PF00436 Single-strand binding protein family IX91_26135 PF00226 DnaJ domain IX91_26135 PF01556 DnaJ C terminal domain IX91_26135 PF00684 DnaJ central domain