locus-tag	class	description
IX91_00010	COG0592	DNA-directed DNA polymerase activity
IX91_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IX91_00020	COG0187	DNA topoisomerase II activity
IX91_00025	COG0071	Belongs to the small heat shock protein (HSP20) family
IX91_00035	COG3977	Valine--pyruvate aminotransferase
IX91_00040	COG0751	glycine-tRNA ligase activity
IX91_00050	COG2119	membrane
IX91_00060	COG0425	Belongs to the sulfur carrier protein TusA family
IX91_00080	COG0604	alcohol dehydrogenase
IX91_00090	COG0129	dihydroxy-acid dehydratase activity
IX91_00095	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IX91_00100	COG3978	acetolactate synthase activity
IX91_00110	COG0606	chelatase, subunit chli
IX91_00120	COG0204	Acyl-transferase
IX91_00125	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IX91_00130	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
IX91_00140	COG3084	Protein conserved in bacteria
IX91_00150	COG4326	sporulation control protein
IX91_00155	COG1272	protein, Hemolysin III
IX91_00160	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IX91_00165	COG0569	domain protein
IX91_00170	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IX91_00170	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IX91_00175	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IX91_00185	COG1652	LysM domain
IX91_00190	COG0758	DNA mediated transformation
IX91_00195	COG2922	Belongs to the Smg family
IX91_00200	COG0551	DNA topoisomerase type I activity
IX91_00205	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IX91_00215	COG0009	L-threonylcarbamoyladenylate synthase
IX91_00220	COG0408	coproporphyrinogen oxidase activity
IX91_00235	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
IX91_00285	COG5001	Diguanylate cyclase
IX91_00285	COG3300	MHYT domain
IX91_00295	COG3852	Histidine kinase
IX91_00305	COG0174	glutamine synthetase
IX91_00335	COG0456	acetyltransferase
IX91_00350	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IX91_00355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
IX91_00360	COG3031	protein transport across the cell outer membrane
IX91_00370	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IX91_00375	COG1459	type II secretion system
IX91_00380	COG2165	general secretion pathway protein
IX91_00385	COG2165	general secretion pathway protein
IX91_00390	COG2165	general secretion pathway protein
IX91_00395	COG4795	General secretion pathway protein
IX91_00400	COG3156	type II secretion system protein K
IX91_00405	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
IX91_00410	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
IX91_00420	COG2205	protein histidine kinase activity
IX91_00425	COG0745	RESPONSE REGULATOR receiver
IX91_00440	COG2183	response to ionizing radiation
IX91_00465	COG0494	nUDIX hydrolase
IX91_00470	COG1218	3'(2'),5'-bisphosphate nucleotidase
IX91_00475	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IX91_00480	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IX91_00485	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IX91_00500	COG2252	PERMEase
IX91_00520	COG1561	YicC-like family, N-terminal region
IX91_00535	COG1560	Kdo2-lipid A biosynthetic process
IX91_00540	COG1560	Kdo2-lipid A biosynthetic process
IX91_00545	COG1309	transcriptional regulator
IX91_00550	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IX91_00560	COG2003	Belongs to the UPF0758 family
IX91_00585	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IX91_00590	COG0859	PFAM glycosyl transferase family 9
IX91_00595	COG0463	Glycosyl transferase, family 2
IX91_00600	COG0859	PFAM glycosyl transferase family 9
IX91_00605	COG3642	lipopolysaccharide core region biosynthetic process
IX91_00620	COG1519	Transferase
IX91_00630	COG0859	PFAM glycosyl transferase family 9
IX91_00685	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
IX91_00710	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IX91_00730	COG1215	transferase activity, transferring glycosyl groups
IX91_00755	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
IX91_00780	COG0463	Glycosyl transferase, family 2
IX91_00805	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IX91_00810	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
IX91_00810	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
IX91_00815	COG0812	UDP-N-acetylmuramate dehydrogenase activity
IX91_00840	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
IX91_00850	COG1573	uracil-dna glycosylase
IX91_00855	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IX91_00860	COG3068	Protein conserved in bacteria
IX91_00865	COG1253	flavin adenine dinucleotide binding
IX91_00880	COG0151	Belongs to the GarS family
IX91_00890	COG0789	Transcriptional regulator
IX91_00895	COG3706	GGDEF domain
IX91_00900	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
IX91_00905	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IX91_00915	COG0439	Biotin carboxylase
IX91_00920	COG0511	ligase activity, forming carbon-carbon bonds
IX91_00925	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
IX91_00930	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IX91_00945	COG2814	Major facilitator Superfamily
IX91_00950	COG2205	protein histidine kinase activity
IX91_00950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_00960	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IX91_00970	COG2095	MarC family integral membrane protein
IX91_00980	COG4232	protein-disulfide reductase activity
IX91_00985	COG1438	arginine binding
IX91_00990	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
IX91_00995	COG0540	Belongs to the ATCase OTCase family
IX91_01000	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
IX91_01015	COG1288	antiporter activity
IX91_01020	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
IX91_01025	COG1027	Aspartate ammonia-lyase
IX91_01070	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IX91_01090	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IX91_01095	COG3954	Phosphoribulokinase
IX91_01100	COG3089	Belongs to the UPF0270 family
IX91_01105	COG0429	hydrolase of the alpha beta-hydrolase fold
IX91_01115	COG0488	(ABC) transporter
IX91_01120	COG2249	NAD(P)H dehydrogenase (quinone) activity
IX91_01130	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
IX91_01135	COG1047	Peptidyl-prolyl cis-trans
IX91_01140	COG1446	asparaginase
IX91_01145	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IX91_01150	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
IX91_01155	COG0402	S-adenosylhomocysteine deaminase activity
IX91_01160	COG0557	exoribonuclease II activity
IX91_01165	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IX91_01175	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IX91_01180	COG0088	Forms part of the polypeptide exit tunnel
IX91_01200	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IX91_01205	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
IX91_01235	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IX91_01250	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
IX91_01265	COG1841	ribosomal large subunit assembly
IX91_01275	COG0201	protein transport
IX91_01285	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
IX91_01290	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
IX91_01305	COG0203	ribosomal protein L17
IX91_01315	COG0545	Peptidyl-prolyl cis-trans isomerase
IX91_01330	COG2153	protein acetylation
IX91_01335	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IX91_01340	COG0737	Belongs to the 5'-nucleotidase family
IX91_01345	COG1648	precorrin-2 dehydrogenase activity
IX91_01345	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IX91_01350	COG0175	sulfate reduction
IX91_01360	COG0471	metal ion transport
IX91_01360	COG3273	potassium ion transport
IX91_01365	COG0529	Catalyzes the synthesis of activated sulfate
IX91_01375	COG0735	belongs to the Fur family
IX91_01385	COG3437	response regulator, receiver
IX91_01470	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
IX91_01475	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IX91_01540	COG1410	methionine synthase
IX91_01540	COG0646	methionine synthase
IX91_01545	COG2239	Acts as a magnesium transporter
IX91_01550	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_01560	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_01565	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IX91_01575	COG1137	ATPase activity
IX91_01580	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
IX91_01590	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
IX91_01605	COG1127	ABC transporter
IX91_01610	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IX91_01615	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IX91_01620	COG2854	intermembrane phospholipid transfer
IX91_01625	COG3113	response to antibiotic
IX91_01630	COG5007	Belongs to the BolA IbaG family
IX91_01640	COG0204	Acyl-transferase
IX91_01710	COG0741	lytic transglycosylase activity
IX91_01715	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
IX91_01720	COG1194	a g-specific adenine glycosylase
IX91_01730	COG2066	Belongs to the glutaminase family
IX91_01735	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IX91_01755	COG0762	integral membrane protein
IX91_01760	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IX91_01765	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IX91_01785	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
IX91_01785	COG1918	ferrous iron import across plasma membrane
IX91_01805	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IX91_01815	COG0189	ligase activity
IX91_01820	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IX91_01825	COG2356	endonuclease I
IX91_01840	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
IX91_01845	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IX91_01855	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IX91_01865	COG0191	fructose-bisphosphate aldolase activity
IX91_01870	COG0668	transmembrane transport
IX91_01885	COG0583	DNA-binding transcription factor activity
IX91_01895	COG3706	GGDEF domain
IX91_01905	COG0469	pyruvate kinase activity
IX91_01910	COG1349	DNA-binding transcription factor activity
IX91_01915	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
IX91_01925	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IX91_01930	COG3722	fumarate hydratase activity
IX91_01935	COG0246	Mannitol dehydrogenase
IX91_01940	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_01940	COG2213	PTS system mannitol-specific
IX91_01945	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
IX91_01955	COG0142	geranyltranstransferase activity
IX91_01965	COG0261	This protein binds to 23S rRNA in the presence of protein L20
IX91_01970	COG0211	Belongs to the bacterial ribosomal protein bL27 family
IX91_01975	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IX91_01980	COG3610	response to peptide
IX91_01985	COG3610	response to peptide
IX91_01995	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
IX91_02005	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
IX91_02010	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
IX91_02020	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
IX91_02025	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
IX91_02035	COG0582	viral genome integration into host DNA
IX91_02105	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IX91_02110	COG0358	DNA primase activity
IX91_02115	COG1610	YqeY-like protein
IX91_02120	COG0828	Belongs to the bacterial ribosomal protein bS21 family
IX91_02125	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IX91_02130	COG2267	carboxylic ester hydrolase activity
IX91_02135	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
IX91_02140	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IX91_02145	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IX91_02155	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
IX91_02160	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
IX91_02165	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
IX91_02170	COG0585	pseudouridine synthase activity
IX91_02185	COG4942	peptidase
IX91_02185	COG1388	LysM domain
IX91_02190	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
IX91_02195	COG4536	flavin adenine dinucleotide binding
IX91_02200	COG4137	Cytochrome C assembly protein
IX91_02205	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IX91_02215	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IX91_02235	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
IX91_02240	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
IX91_02245	COG0237	dephospho-CoA kinase activity
IX91_02255	COG1459	type II secretion system
IX91_02260	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IX91_02270	COG0157	Belongs to the NadC ModD family
IX91_02280	COG0716	FMN binding
IX91_02290	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IX91_02295	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IX91_02300	COG2186	Transcriptional regulator
IX91_02305	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
IX91_02310	COG0508	dehydrogenase complex catalyzes the overall conversion of
IX91_02315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IX91_02330	COG0288	reversible hydration of carbon dioxide
IX91_02335	COG0659	secondary active sulfate transmembrane transporter activity
IX91_02340	COG1131	(ABC) transporter
IX91_02345	COG0842	Transport permease protein
IX91_02360	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IX91_02370	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IX91_02375	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
IX91_02385	COG1643	Atp-dependent helicase
IX91_02390	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IX91_02395	COG1752	Esterase of the alpha-beta hydrolase superfamily
IX91_02400	COG1049	propionate catabolic process, 2-methylcitrate cycle
IX91_02410	COG3112	Uncharacterised protein family (UPF0231)
IX91_02420	COG0004	ammonium transporteR
IX91_02425	COG1840	ABC-type Fe3 transport system, periplasmic component
IX91_02435	COG3842	ATPase activity
IX91_02440	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IX91_02455	COG2971	BadF BadG BcrA BcrD
IX91_02465	COG4608	Belongs to the ABC transporter superfamily
IX91_02470	COG0444	Belongs to the ABC transporter superfamily
IX91_02475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IX91_02485	COG0747	negative chemotaxis
IX91_02490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_02490	COG0784	Response regulator, receiver
IX91_02490	COG2205	protein histidine kinase activity
IX91_02490	COG2198	Histidine kinase
IX91_02495	COG2813	Specifically methylates the guanine in position
IX91_02500	COG0628	permease
IX91_02505	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
IX91_02525	COG0739	heme binding
IX91_02530	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IX91_02540	COG2027	D-alanyl-D-alanine carboxypeptidase
IX91_02545	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
IX91_02555	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IX91_02560	COG1534	Rna-binding protein
IX91_02570	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IX91_02575	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
IX91_02590	COG0456	acetyltransferase
IX91_02600	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IX91_02605	COG0513	Belongs to the DEAD box helicase family
IX91_02620	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
IX91_02625	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
IX91_02630	COG2204	response regulator
IX91_02645	COG0667	Aldo Keto reductase
IX91_02655	COG3066	DNA modification
IX91_02670	COG0730	response to heat
IX91_02680	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
IX91_02685	COG1283	sodium-dependent phosphate transmembrane transporter activity
IX91_02690	COG0583	DNA-binding transcription factor activity
IX91_02695	COG0640	Transcriptional regulator
IX91_02700	COG0268	Binds directly to 16S ribosomal RNA
IX91_02705	COG0728	peptidoglycan biosynthetic process
IX91_02710	COG0196	riboflavin kinase activity
IX91_02725	COG1047	Peptidyl-prolyl cis-trans
IX91_02730	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
IX91_02735	COG0612	Peptidase, M16
IX91_02740	COG1966	Carbon starvation protein
IX91_02750	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
IX91_02755	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
IX91_02770	COG1737	Transcriptional regulator
IX91_02775	COG1472	Belongs to the glycosyl hydrolase 3 family
IX91_02780	COG3279	Response regulator of the LytR AlgR family
IX91_02785	COG3275	phosphorelay sensor kinase activity
IX91_02790	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IX91_02795	COG1605	Chorismate mutase
IX91_02795	COG0287	Prephenate dehydrogenase
IX91_02800	COG0739	heme binding
IX91_02810	COG0488	(ABC) transporter
IX91_02820	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
IX91_02825	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
IX91_02830	COG5001	Diguanylate cyclase
IX91_02835	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
IX91_02840	COG1605	Chorismate mutase
IX91_02840	COG0077	Prephenate dehydratase
IX91_02845	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IX91_02850	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
IX91_02855	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IX91_02860	COG0564	pseudouridine synthase activity
IX91_02870	COG0542	response to heat
IX91_02910	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IX91_02915	COG0483	inositol monophosphate 1-phosphatase activity
IX91_02935	COG0822	iron-sulfur transferase activity
IX91_02950	COG0443	Heat shock 70 kDa protein
IX91_02955	COG0633	Ferredoxin
IX91_02960	COG2975	iron-sulfur cluster assembly
IX91_02965	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IX91_02975	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IX91_02980	COG0583	DNA-binding transcription factor activity
IX91_02990	COG0583	DNA-binding transcription factor activity
IX91_02995	COG1022	Amp-dependent synthetase and ligase
IX91_03000	COG2169	Transcriptional regulator
IX91_03030	COG4964	Belongs to the GSP D family
IX91_03105	COG0395	ABC-type sugar transport system, permease component
IX91_03115	COG3250	beta-galactosidase activity
IX91_03120	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
IX91_03120	COG3408	Glycogen debranching enzyme
IX91_03125	COG2207	Transcriptional regulator
IX91_03125	COG0662	Cupin 2, conserved barrel domain protein
IX91_03150	COG0531	amino acid
IX91_03155	COG2731	YhcH YjgK YiaL family protein
IX91_03160	COG3250	beta-galactosidase activity
IX91_03165	COG1609	Transcriptional regulator
IX91_03170	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
IX91_03175	COG1085	galactose-1-phosphate uridylyltransferase
IX91_03185	COG2017	converts alpha-aldose to the beta-anomer
IX91_03195	COG0450	alkyl hydroperoxide reductase
IX91_03210	COG4989	oxidoreductase activity
IX91_03220	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IX91_03235	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
IX91_03240	COG1349	DNA-binding transcription factor activity
IX91_03245	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IX91_03250	COG2271	Major facilitator Superfamily
IX91_03255	COG2171	N-acyltransferase activity
IX91_03260	COG0450	alkyl hydroperoxide reductase
IX91_03265	COG0583	DNA-binding transcription factor activity
IX91_03270	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
IX91_03280	COG0517	IMP dehydrogenase activity
IX91_03285	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
IX91_03295	COG1862	Preprotein translocase
IX91_03300	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IX91_03305	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IX91_03315	COG1879	ABC-type sugar transport system periplasmic component
IX91_03330	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IX91_03345	COG0745	RESPONSE REGULATOR receiver
IX91_03350	COG5002	protein histidine kinase activity
IX91_03360	COG0248	Ppx GppA phosphatase
IX91_03365	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
IX91_03370	COG0573	inorganic phosphate transmembrane transporter activity
IX91_03375	COG0581	inorganic phosphate transmembrane transporter activity
IX91_03380	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
IX91_03385	COG0704	Plays a role in the regulation of phosphate uptake
IX91_03410	COG3141	response to X-ray
IX91_03425	COG3284	Transcriptional regulator
IX91_03430	COG3842	ATPase activity
IX91_03435	COG3842	ATPase activity
IX91_03445	COG0395	ABC-type sugar transport system, permease component
IX91_03460	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
IX91_03465	COG1074	ATP-dependent DNA helicase activity
IX91_03470	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IX91_03490	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
IX91_03495	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
IX91_03500	COG2166	iron-sulfur cluster assembly
IX91_03515	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
IX91_03520	COG0124	histidyl-tRNA synthetase
IX91_03525	COG2976	Protein conserved in bacteria
IX91_03530	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IX91_03535	COG1160	GTP binding
IX91_03545	COG3706	GGDEF domain
IX91_03560	COG0516	GMP reductase activity
IX91_03560	COG0517	IMP dehydrogenase activity
IX91_03565	COG0519	Catalyzes the synthesis of GMP from XMP
IX91_03565	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IX91_03575	COG1584	GPR1 FUN34 yaaH family protein
IX91_03580	COG1115	amino acid carrier protein
IX91_03585	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IX91_03610	COG2873	o-acetylhomoserine
IX91_03615	COG1253	flavin adenine dinucleotide binding
IX91_03620	COG0583	DNA-binding transcription factor activity
IX91_03630	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
IX91_03635	COG0204	Acyl-transferase
IX91_03640	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IX91_03650	COG0668	transmembrane transport
IX91_03665	COG0009	L-threonylcarbamoyladenylate synthase
IX91_03670	COG0579	oxidoreductase
IX91_03685	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX91_03695	COG2271	Major facilitator Superfamily
IX91_03700	COG3851	Histidine kinase
IX91_03705	COG2197	response regulator
IX91_03740	COG1362	aminopeptidase activity
IX91_03785	COG4555	ABC transporter
IX91_03815	COG0583	DNA-binding transcription factor activity
IX91_03820	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
IX91_03825	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IX91_03830	COG0582	viral genome integration into host DNA
IX91_03840	COG2867	negative regulation of translational initiation
IX91_03845	COG2914	Belongs to the UPF0125 (RnfH) family
IX91_03850	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IX91_03855	COG0497	DNA recombination
IX91_03865	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IX91_03885	COG0443	Heat shock 70 kDa protein
IX91_03890	COG0484	heat shock protein binding
IX91_03920	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
IX91_03930	COG0590	tRNA wobble adenosine to inosine editing
IX91_03940	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
IX91_03945	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IX91_03945	COG0047	phosphoribosylformylglycinamidine synthase activity
IX91_03970	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IX91_03975	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
IX91_03980	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
IX91_03990	COG1187	pseudouridine synthase activity
IX91_03995	COG2840	Smr protein MutS2
IX91_04025	COG3104	oligopeptide transport
IX91_04030	COG0367	asparagine synthase
IX91_04035	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IX91_04035	COG4651	solute:proton antiporter activity
IX91_04040	COG1846	Transcriptional regulator
IX91_04040	COG1940	carbohydrate kinase activity
IX91_04045	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
IX91_04050	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_04050	COG1263	PTS System
IX91_04050	COG2190	(PTS) system
IX91_04060	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IX91_04065	COG0735	belongs to the Fur family
IX91_04075	COG0716	FMN binding
IX91_04085	COG0596	Alpha beta hydrolase
IX91_04090	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
IX91_04095	COG0033	Phosphoglucomutase
IX91_04105	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IX91_04110	COG0372	Belongs to the citrate synthase family
IX91_04115	COG2009	succinate dehydrogenase
IX91_04120	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
IX91_04125	COG1053	succinate dehydrogenase
IX91_04135	COG0567	Dehydrogenase, E1 component
IX91_04140	COG0508	dehydrogenase complex catalyzes the overall conversion of
IX91_04180	COG3098	single-species biofilm formation
IX91_04185	COG0564	pseudouridine synthase activity
IX91_04195	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IX91_04200	COG0142	geranyltranstransferase activity
IX91_04210	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
IX91_04220	COG0301	tRNA thio-modification
IX91_04220	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IX91_04225	COG0583	DNA-binding transcription factor activity
IX91_04235	COG2363	Small membrane protein
IX91_04240	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
IX91_04250	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IX91_04255	COG1611	Belongs to the LOG family
IX91_04260	COG3706	GGDEF domain
IX91_04260	COG0745	RESPONSE REGULATOR receiver
IX91_04270	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IX91_04270	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IX91_04280	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
IX91_04290	COG1876	peptidase activity
IX91_04295	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IX91_04300	COG1393	Belongs to the ArsC family
IX91_04320	COG4235	cytochrome complex assembly
IX91_04325	COG4221	oxidoreductase activity
IX91_04340	COG0437	4 iron, 4 sulfur cluster binding
IX91_04345	COG3301	Polysulphide reductase, NrfD
IX91_04350	COG1138	Cytochrome C-type biogenesis protein
IX91_04355	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IX91_04360	COG3088	subunit of a heme lyase
IX91_04360	COG4235	cytochrome complex assembly
IX91_04375	COG2837	iron assimilation
IX91_04390	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
IX91_04400	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
IX91_04410	COG1516	flagellar protein fliS
IX91_04415	COG2204	response regulator
IX91_04420	COG4191	Histidine kinase
IX91_04425	COG2204	response regulator
IX91_04430	COG1677	Flagellar hook-basal body complex protein FliE
IX91_04440	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
IX91_04465	COG1580	Controls the rotational direction of flagella during chemotaxis
IX91_04490	COG1987	bacterial-type flagellum assembly
IX91_04495	COG1684	flagellar biosynthetic protein fliR
IX91_04510	COG2890	protein-(glutamine-N5) methyltransferase activity
IX91_04515	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
IX91_04520	COG0737	Belongs to the 5'-nucleotidase family
IX91_04530	COG2860	membrane
IX91_04535	COG3101	peptidyl-lysine hydroxylation
IX91_04555	COG0431	NADPH-dependent FMN reductase
IX91_04565	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IX91_04570	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IX91_04575	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IX91_04585	COG0101	tRNA pseudouridine synthase activity
IX91_04595	COG0285	dihydrofolate synthase activity
IX91_04600	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
IX91_04605	COG1286	toxin biosynthetic process
IX91_04610	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
IX91_04615	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IX91_04620	COG1121	(ABC) transporter
IX91_04625	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
IX91_04630	COG4977	sequence-specific DNA binding
IX91_04640	COG1918	ferrous iron import across plasma membrane
IX91_04645	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
IX91_04660	COG0018	arginyl-trna synthetase
IX91_04670	COG3102	Protein conserved in bacteria
IX91_04685	COG2062	phosphohistidine phosphatase, SixA
IX91_04700	COG0455	bacterial-type flagellum organization
IX91_04715	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
IX91_04720	COG0643	Histidine kinase
IX91_04720	COG2198	Histidine kinase
IX91_04725	COG2201	protein-glutamate methylesterase activity
IX91_04730	COG1192	Involved in chromosome partitioning
IX91_04740	COG0835	chemotaxis
IX91_04750	COG4133	protoheme IX ABC transporter activity
IX91_04755	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IX91_04760	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IX91_04765	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IX91_04770	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
IX91_04775	COG1138	Cytochrome C-type biogenesis protein
IX91_04780	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IX91_04800	COG2067	long-chain fatty acid transport protein
IX91_04805	COG2067	long-chain fatty acid transport protein
IX91_04820	COG0183	Belongs to the thiolase family
IX91_04825	COG1250	3-hydroxyacyl-CoA dehydrogenase
IX91_04825	COG1024	Enoyl-CoA hydratase
IX91_04830	COG0778	Nitroreductase
IX91_04840	COG0745	RESPONSE REGULATOR receiver
IX91_04850	COG2832	Protein of unknown function (DUF454)
IX91_04855	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IX91_04865	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
IX91_04870	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IX91_04880	COG0739	heme binding
IX91_04925	COG3501	Rhs element vgr protein
IX91_04950	COG0515	serine threonine protein kinase
IX91_04985	COG1522	sequence-specific DNA binding
IX91_05120	COG2983	Belongs to the UPF0260 family
IX91_05125	COG0668	transmembrane transport
IX91_05160	COG2226	methyltransferase
IX91_05175	COG0676	glucose-6-phosphate 1-epimerase activity
IX91_05180	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IX91_05185	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IX91_05195	COG3139	Protein of unknown function (DUF1315)
IX91_05200	COG3012	SEC-C Motif Domain Protein
IX91_05205	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
IX91_05215	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IX91_05230	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
IX91_05235	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
IX91_05240	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
IX91_05260	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IX91_05270	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
IX91_05295	COG3070	regulator of competence-specific genes
IX91_05300	COG1609	Transcriptional regulator
IX91_05310	COG0745	RESPONSE REGULATOR receiver
IX91_05315	COG1434	Gram-negative-bacterium-type cell wall biogenesis
IX91_05320	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IX91_05330	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
IX91_05335	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
IX91_05365	COG4067	protein conserved in archaea
IX91_05365	COG0189	ligase activity
IX91_05380	COG1801	Protein of unknown function DUF72
IX91_05390	COG1187	pseudouridine synthase activity
IX91_05400	COG1278	Cold shock
IX91_05410	COG0542	response to heat
IX91_05420	COG1434	Gram-negative-bacterium-type cell wall biogenesis
IX91_05455	COG2116	formate transmembrane transporter activity
IX91_05470	COG0390	transport system, permease component
IX91_05475	COG4459	periplasmic nitrate reductase
IX91_05480	COG3005	denitrification pathway
IX91_05485	COG0243	molybdopterin cofactor binding
IX91_05510	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
IX91_05515	COG0840	transmembrane signaling receptor activity
IX91_05525	COG2255	four-way junction helicase activity
IX91_05535	COG1294	oxidase, subunit
IX91_05540	COG4890	Cyd operon protein YbgT
IX91_05550	COG0824	Thioesterase
IX91_05555	COG0811	peptide transport
IX91_05575	COG2885	chlorophyll binding
IX91_05580	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
IX91_05585	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
IX91_05600	COG0784	Response regulator, receiver
IX91_05600	COG2205	protein histidine kinase activity
IX91_05630	COG0494	nUDIX hydrolase
IX91_05650	COG1715	Restriction endonuclease
IX91_05655	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
IX91_05660	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
IX91_05680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_05690	COG1482	cell wall glycoprotein biosynthetic process
IX91_05695	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_05695	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_05695	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_05700	COG2207	Transcriptional regulator
IX91_05710	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_05715	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_05720	COG0840	transmembrane signaling receptor activity
IX91_05725	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
IX91_05740	COG5002	protein histidine kinase activity
IX91_05740	COG3850	Histidine kinase
IX91_05745	COG0745	RESPONSE REGULATOR receiver
IX91_05750	COG0463	Glycosyl transferase, family 2
IX91_05755	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IX91_05770	COG1960	acyl-CoA dehydrogenase activity
IX91_05775	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
IX91_05780	COG0708	Exodeoxyribonuclease III
IX91_05785	COG0840	transmembrane signaling receptor activity
IX91_05790	COG2850	peptidyl-arginine hydroxylation
IX91_05800	COG3923	Primosomal replication protein n
IX91_05805	COG0730	response to heat
IX91_05810	COG1199	ATP-dependent helicase activity
IX91_05820	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
IX91_05825	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
IX91_05840	COG2226	methyltransferase
IX91_05845	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
IX91_05865	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_05880	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IX91_05890	COG2268	Band 7 protein
IX91_05905	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IX91_05915	COG0482	sulfurtransferase activity
IX91_05925	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_05935	COG1757	Na H antiporter
IX91_05945	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
IX91_05955	COG0131	Imidazoleglycerol-phosphate dehydratase
IX91_05955	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
IX91_05960	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
IX91_05970	COG0107	imidazoleglycerol-phosphate synthase activity
IX91_05975	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
IX91_05975	COG0140	phosphoribosyl-ATP diphosphatase activity
IX91_05985	COG1227	inorganic diphosphatase activity
IX91_06000	COG4172	Belongs to the ABC transporter superfamily
IX91_06010	COG4171	peptide transport system, permease
IX91_06015	COG4168	peptide transport system, permease
IX91_06025	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
IX91_06030	COG1842	Phage shock protein A
IX91_06050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX91_06060	COG2818	Glycosylase
IX91_06065	COG5380	lipid catabolic process
IX91_06070	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
IX91_06075	COG0626	cystathionine gamma-synthase activity
IX91_06085	COG0733	neurotransmitter:sodium symporter activity
IX91_06095	COG0564	pseudouridine synthase activity
IX91_06100	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IX91_06120	COG4964	Belongs to the GSP D family
IX91_06170	COG2885	chlorophyll binding
IX91_06175	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IX91_06180	COG4136	ATPase activity
IX91_06185	COG4135	transport system, permease component
IX91_06190	COG4134	Bacterial extracellular solute-binding protein
IX91_06200	COG3313	Fe-S protein
IX91_06215	COG2200	EAL domain
IX91_06225	COG2350	Protein conserved in bacteria
IX91_06230	COG1607	acyl-coa hydrolase
IX91_06280	COG0417	DNA replication proofreading
IX91_06285	COG2197	response regulator
IX91_06290	COG0322	excinuclease ABC activity
IX91_06320	COG3706	GGDEF domain
IX91_06325	COG2133	pyrroloquinoline quinone binding
IX91_06355	COG3706	GGDEF domain
IX91_06355	COG0745	RESPONSE REGULATOR receiver
IX91_06375	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IX91_06375	COG0072	phenylalanine-tRNA ligase activity
IX91_06395	COG1172	Belongs to the binding-protein-dependent transport system permease family
IX91_06400	COG1172	Belongs to the binding-protein-dependent transport system permease family
IX91_06405	COG1129	ABC transporter
IX91_06415	COG2390	Transcriptional regulator
IX91_06420	COG0667	Aldo Keto reductase
IX91_06425	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
IX91_06455	COG1414	Transcriptional regulator
IX91_06460	COG1414	Transcriptional regulator
IX91_06465	COG3386	PFAM SMP-30 Gluconolaconase
IX91_06475	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_06475	COG1263	PTS System
IX91_06480	COG1609	Transcriptional regulator
IX91_06485	COG1621	beta-fructofuranosidase activity
IX91_06490	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_06495	COG1609	Transcriptional regulator
IX91_06510	COG0583	DNA-binding transcription factor activity
IX91_06530	COG1335	isochorismatase
IX91_06545	COG0346	lactoylglutathione lyase activity
IX91_06585	COG2824	Alkylphosphonate utilization operon protein PhnA
IX91_06590	COG0789	Transcriptional regulator
IX91_06595	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IX91_06610	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IX91_06615	COG1280	lysine exporter protein (LysE YggA)
IX91_06650	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IX91_06675	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
IX91_06680	COG1280	lysine exporter protein (LysE YggA)
IX91_06695	COG1115	amino acid carrier protein
IX91_06725	COG2195	Cleaves the N-terminal amino acid of tripeptides
IX91_06735	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
IX91_06745	COG0625	glutathione transferase activity
IX91_06750	COG5001	Diguanylate cyclase
IX91_06750	COG2203	Gaf domain
IX91_06750	COG3706	GGDEF domain
IX91_06750	COG4251	negative regulation of phosphorylation
IX91_06765	COG2885	chlorophyll binding
IX91_06780	COG0247	lactate metabolic process
IX91_06780	COG0277	FAD linked oxidase domain protein
IX91_06795	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
IX91_06800	COG2986	histidine ammonia-lyase
IX91_06805	COG0010	Belongs to the arginase family
IX91_06815	COG2188	Transcriptional regulator
IX91_06820	COG4326	sporulation control protein
IX91_06855	COG1346	cytolysis
IX91_06865	COG2925	Exonuclease
IX91_06885	COG0702	epimerase
IX91_06895	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
IX91_06905	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
IX91_06930	COG4139	cobalamin transport
IX91_06945	COG3706	GGDEF domain
IX91_06960	COG0583	DNA-binding transcription factor activity
IX91_06965	COG1119	ATPase activity
IX91_06985	COG1451	nucleotide metabolic process
IX91_07005	COG2267	carboxylic ester hydrolase activity
IX91_07040	COG2095	MarC family integral membrane protein
IX91_07055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX91_07090	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
IX91_07195	COG3501	Rhs element vgr protein
IX91_07215	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
IX91_07220	COG0372	Belongs to the citrate synthase family
IX91_07230	COG2828	Protein conserved in bacteria
IX91_07255	COG0561	phosphatase activity
IX91_07260	COG0602	queuosine metabolic process
IX91_07270	COG3706	GGDEF domain
IX91_07295	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IX91_07300	COG0840	transmembrane signaling receptor activity
IX91_07305	COG1254	Belongs to the acylphosphatase family
IX91_07310	COG2920	part of a sulfur-relay system
IX91_07315	COG0670	Belongs to the BI1 family
IX91_07320	COG1126	abc transporter atp-binding protein
IX91_07325	COG0765	amino acid transport
IX91_07330	COG4597	amino acid ABC transporter
IX91_07335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_07345	COG1666	GTP binding
IX91_07350	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IX91_07375	COG3008	intermembrane lipid transfer
IX91_07380	COG2995	paraquat-inducible protein a
IX91_07385	COG1132	(ABC) transporter
IX91_07390	COG1956	GAF domain-containing protein
IX91_07395	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
IX91_07410	COG0308	aminopeptidase N
IX91_07435	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IX91_07435	COG0116	Belongs to the methyltransferase superfamily
IX91_07445	COG0488	(ABC) transporter
IX91_07460	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IX91_07465	COG1067	ATP-dependent peptidase activity
IX91_07500	COG2226	methyltransferase
IX91_07530	COG3278	Belongs to the heme-copper respiratory oxidase family
IX91_07545	COG2010	Cytochrome c
IX91_07555	COG2217	Heavy metal translocating P-type atpase
IX91_07570	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IX91_07575	COG0589	response to stress
IX91_07580	COG0037	tRNA processing
IX91_07590	COG0534	Mate efflux family protein
IX91_07610	COG3842	ATPase activity
IX91_07615	COG1176	ABC-type spermidine putrescine transport system, permease component I
IX91_07620	COG1177	transmembrane transport
IX91_07625	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
IX91_07630	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
IX91_07640	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
IX91_07645	COG0004	ammonium transporteR
IX91_07660	COG0437	4 iron, 4 sulfur cluster binding
IX91_07665	COG0243	molybdopterin cofactor binding
IX91_07665	COG3383	formate dehydrogenase (NAD+) activity
IX91_07695	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
IX91_07705	COG3040	lipid binding
IX91_07840	COG2801	Transposase and inactivated derivatives
IX91_07885	COG0488	(ABC) transporter
IX91_07895	COG4191	Histidine kinase
IX91_07900	COG2204	response regulator
IX91_07910	COG4662	Binding-protein-dependent transport system inner membrane component
IX91_07915	COG3842	ATPase activity
IX91_07920	COG0746	molybdenum cofactor guanylyltransferase activity
IX91_07925	COG0303	'Molybdopterin
IX91_07950	COG0840	transmembrane signaling receptor activity
IX91_07955	COG0791	NLP P60 protein
IX91_07975	COG0307	riboflavin synthase, alpha
IX91_07980	COG0534	Mate efflux family protein
IX91_07995	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
IX91_07995	COG2885	chlorophyll binding
IX91_08030	COG0438	transferase activity, transferring glycosyl groups
IX91_08050	COG0110	maltose O-acetyltransferase activity
IX91_08065	COG0438	transferase activity, transferring glycosyl groups
IX91_08075	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
IX91_08145	COG0745	RESPONSE REGULATOR receiver
IX91_08150	COG0814	amino acid
IX91_08155	COG1475	DNA binding
IX91_08160	COG3969	phosphoadenosine phosphosulfate
IX91_08195	COG2116	formate transmembrane transporter activity
IX91_08200	COG2146	nitrite reductase [NAD(P)H] activity
IX91_08205	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IX91_08210	COG0840	transmembrane signaling receptor activity
IX91_08240	COG4565	transcriptional regulatory protein
IX91_08245	COG3290	protein histidine kinase activity
IX91_08260	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
IX91_08265	COG0848	biopolymer transport protein
IX91_08270	COG0811	peptide transport
IX91_08275	COG0811	peptide transport
IX91_08285	COG4774	siderophore transport
IX91_08290	COG2205	protein histidine kinase activity
IX91_08295	COG0745	RESPONSE REGULATOR receiver
IX91_08315	COG0584	glycerophosphoryl diester phosphodiesterase
IX91_08330	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
IX91_08335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IX91_08350	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IX91_08355	COG1328	CTP reductase activity
IX91_08360	COG0840	transmembrane signaling receptor activity
IX91_08380	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IX91_08385	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IX91_08415	COG0019	diaminopimelate decarboxylase activity
IX91_08460	COG4181	ATPase activity
IX91_08465	COG0534	Mate efflux family protein
IX91_08470	COG0702	epimerase
IX91_08480	COG2814	Major facilitator Superfamily
IX91_08490	COG1061	Type III restriction enzyme res subunit
IX91_08505	COG0642	Histidine kinase
IX91_08520	COG3710	Transcriptional regulator
IX91_08525	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX91_08530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX91_08550	COG0463	Glycosyl transferase, family 2
IX91_08560	COG0583	DNA-binding transcription factor activity
IX91_08565	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IX91_08580	COG0523	cobalamin synthesis protein
IX91_08585	COG1716	ATPase activity
IX91_08585	COG5001	Diguanylate cyclase
IX91_08595	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IX91_08600	COG1780	Probably involved in ribonucleotide reductase function
IX91_08610	COG0316	Belongs to the HesB IscA family
IX91_08615	COG0719	Fe-S assembly protein
IX91_08620	COG0396	ATPase activity
IX91_08625	COG0719	Fe-S assembly protein
IX91_08630	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IX91_08635	COG2166	iron-sulfur cluster assembly
IX91_08640	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
IX91_08665	COG1858	cytochrome C peroxidase
IX91_08670	COG2205	protein histidine kinase activity
IX91_08670	COG0784	Response regulator, receiver
IX91_08685	COG2962	Rard protein
IX91_08690	COG0531	amino acid
IX91_08700	COG4667	esterase of the alpha-beta hydrolase superfamily
IX91_08740	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
IX91_08755	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IX91_08760	COG3108	Peptidase M15
IX91_08765	COG2989	Protein conserved in bacteria
IX91_08790	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IX91_08800	COG3706	GGDEF domain
IX91_08815	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IX91_08820	COG3283	Transcriptional regulator of aromatic amino acids metabolism
IX91_08830	COG3106	COG3106 Predicted ATPase
IX91_08845	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IX91_08865	COG0494	nUDIX hydrolase
IX91_08870	COG0814	amino acid
IX91_08875	COG1760	l-serine dehydratase
IX91_08885	COG2356	endonuclease I
IX91_08890	COG0814	amino acid
IX91_08900	COG0659	secondary active sulfate transmembrane transporter activity
IX91_08910	COG0840	transmembrane signaling receptor activity
IX91_08915	COG0017	Asparaginyl-tRNA synthetase
IX91_08925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX91_08935	COG3437	response regulator, receiver
IX91_08935	COG2770	Histidine kinase
IX91_08940	COG1448	Aminotransferase
IX91_08955	COG1643	Atp-dependent helicase
IX91_08960	COG0281	malic enzyme
IX91_08970	COG2949	membrane
IX91_08975	COG3706	GGDEF domain
IX91_08985	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IX91_08995	COG0492	ferredoxin-NADP+ reductase activity
IX91_09000	COG4988	ABC transporter
IX91_09005	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
IX91_09010	COG1187	pseudouridine synthase activity
IX91_09015	COG0009	L-threonylcarbamoyladenylate synthase
IX91_09020	COG0613	PHP domain protein
IX91_09030	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
IX91_09035	COG0512	Glutamine amidotransferase of anthranilate synthase
IX91_09040	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IX91_09045	COG0135	phosphoribosylanthranilate isomerase activity
IX91_09045	COG0134	indole-3-glycerol-phosphate synthase activity
IX91_09055	COG0159	tryptophan synthase activity
IX91_09060	COG1301	dicarboxylic acid transport
IX91_09070	COG1132	(ABC) transporter
IX91_09080	COG1643	Atp-dependent helicase
IX91_09115	COG3706	GGDEF domain
IX91_09125	COG0443	Heat shock 70 kDa protein
IX91_09130	COG0443	Heat shock 70 kDa protein
IX91_09155	COG0457	Tetratricopeptide repeat
IX91_09220	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
IX91_09225	COG4790	Type iii secretion
IX91_09230	COG4794	Type iii secretion
IX91_09235	COG4791	protein targeting
IX91_09240	COG4792	protein secretion
IX91_09275	COG4669	(LipO)protein
IX91_09350	COG0697	spore germination
IX91_09375	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IX91_09385	COG0673	inositol 2-dehydrogenase activity
IX91_09395	COG0583	DNA-binding transcription factor activity
IX91_09405	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IX91_09410	COG1846	Transcriptional regulator
IX91_09415	COG1764	response to oxidative stress
IX91_09420	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
IX91_09430	COG3385	transposase activity
IX91_09455	COG1032	radical SAM domain protein
IX91_09460	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
IX91_09470	COG4191	Histidine kinase
IX91_09470	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_09485	COG3070	regulator of competence-specific genes
IX91_09495	COG2431	L-lysine efflux transmembrane transporter activity
IX91_09505	COG0076	glutamate decarboxylase activity
IX91_09510	COG1737	Transcriptional regulator
IX91_09515	COG1454	alcohol dehydrogenase
IX91_09515	COG1012	belongs to the aldehyde dehydrogenase family
IX91_09520	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IX91_09530	COG4160	amino acid transport
IX91_09535	COG4215	(ABC) transporter
IX91_09555	COG1882	Formate acetyltransferase
IX91_09570	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IX91_09585	COG0840	transmembrane signaling receptor activity
IX91_09595	COG2766	serine protein kinase
IX91_09600	COG2718	Belongs to the UPF0229 family
IX91_09605	COG2719	SpoVR family
IX91_09610	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
IX91_09625	COG1132	(ABC) transporter
IX91_09630	COG0658	competence protein
IX91_09630	COG2333	competence protein COMEC
IX91_09655	COG4591	ABC-type transport system involved in lipoprotein release permease component
IX91_09660	COG1136	(ABC) transporter
IX91_09665	COG4591	ABC-type transport system involved in lipoprotein release permease component
IX91_09675	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IX91_09685	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IX91_09690	COG1252	NADH dehydrogenase
IX91_09720	COG0537	adenosine 5'-monophosphoramidase activity
IX91_09735	COG2186	Transcriptional regulator
IX91_09755	COG1674	ftsk spoiiie
IX91_09760	COG1522	sequence-specific DNA binding
IX91_09765	COG0686	Belongs to the AlaDH PNT family
IX91_09770	COG3092	negative regulation of chromosome organization
IX91_09775	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IX91_09780	COG0857	belongs to the CobB CobQ family
IX91_09780	COG0280	phosphate acetyltransferase
IX91_09785	COG3706	GGDEF domain
IX91_09790	COG0435	Glutathione S-transferase
IX91_09800	COG0444	Belongs to the ABC transporter superfamily
IX91_09805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IX91_09810	COG0601	transmembrane transport
IX91_09825	COG2067	long-chain fatty acid transport protein
IX91_09840	COG0577	efflux transmembrane transporter activity
IX91_09840	COG1136	(ABC) transporter
IX91_09845	COG0577	efflux transmembrane transporter activity
IX91_09845	COG1136	(ABC) transporter
IX91_09850	COG0577	efflux transmembrane transporter activity
IX91_09860	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX91_09870	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX91_09905	COG0583	DNA-binding transcription factor activity
IX91_09910	COG2199	diguanylate cyclase activity
IX91_09925	COG3126	Type III secretion system lipoprotein chaperone (YscW)
IX91_09930	COG1946	Acyl-CoA thioesterase
IX91_09940	COG1522	sequence-specific DNA binding
IX91_09945	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IX91_09965	COG0477	Major facilitator Superfamily
IX91_09970	COG2855	membrane
IX91_09985	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_09985	COG1263	PTS System
IX91_09985	COG2190	(PTS) system
IX91_09995	COG1441	menaquinone biosynthetic process
IX91_10005	COG0596	Alpha beta hydrolase
IX91_10010	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
IX91_10015	COG1169	isochorismate synthase
IX91_10020	COG0436	Aminotransferase
IX91_10025	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
IX91_10045	COG0232	Belongs to the dGTPase family. Type 2 subfamily
IX91_10050	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IX91_10065	COG0513	Belongs to the DEAD box helicase family
IX91_10070	COG2188	Transcriptional regulator
IX91_10080	COG2190	(PTS) system
IX91_10080	COG1263	PTS System
IX91_10080	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_10085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_10090	COG0800	Aldolase
IX91_10095	COG0616	signal peptide processing
IX91_10100	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_10120	COG0784	Response regulator, receiver
IX91_10120	COG0835	chemotaxis
IX91_10125	COG1940	carbohydrate kinase activity
IX91_10135	COG0469	pyruvate kinase activity
IX91_10140	COG4667	esterase of the alpha-beta hydrolase superfamily
IX91_10165	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_10165	COG1263	PTS System
IX91_10170	COG0084	hydrolase, TatD family'
IX91_10180	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IX91_10185	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IX91_10215	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IX91_10230	COG1399	metal-binding, possibly nucleic acid-binding protein
IX91_10235	COG0424	maF-like protein
IX91_10240	COG0564	pseudouridine synthase activity
IX91_10245	COG1530	ribonuclease E activity
IX91_10250	COG0659	secondary active sulfate transmembrane transporter activity
IX91_10255	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
IX91_10260	COG0318	PFAM AMP-dependent synthetase and ligase
IX91_10265	COG0596	Alpha beta hydrolase
IX91_10270	COG3065	identical protein binding
IX91_10280	COG1214	PFAM Peptidase M22, glycoprotease
IX91_10285	COG1199	ATP-dependent helicase activity
IX91_10295	COG0788	formyltetrahydrofolate deformylase activity
IX91_10300	COG0446	pyridine nucleotide-disulphide oxidoreductase
IX91_10300	COG1902	pentaerythritol trinitrate reductase activity
IX91_10305	COG0616	signal peptide processing
IX91_10320	COG0477	Major facilitator Superfamily
IX91_10325	COG0252	asparaginase activity
IX91_10335	COG2175	clavaminate synthase activity
IX91_10340	COG2084	Dehydrogenase
IX91_10345	COG0730	response to heat
IX91_10355	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
IX91_10365	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IX91_10375	COG3318	Belongs to the UPF0149 family
IX91_10375	COG3012	SEC-C Motif Domain Protein
IX91_10385	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IX91_10390	COG2199	diguanylate cyclase activity
IX91_10390	COG2203	Gaf domain
IX91_10400	COG4120	Belongs to the binding-protein-dependent transport system permease family
IX91_10415	COG0583	DNA-binding transcription factor activity
IX91_10435	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
IX91_10440	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
IX91_10455	COG0539	negative regulation of cytoplasmic translation
IX91_10460	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
IX91_10465	COG1555	photosystem II stabilization
IX91_10470	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IX91_10475	COG0776	regulation of translation
IX91_10480	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
IX91_10495	COG0544	peptidyl-prolyl cis-trans isomerase activity
IX91_10505	COG2204	response regulator
IX91_10510	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
IX91_10515	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
IX91_10520	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
IX91_10525	COG3842	ATPase activity
IX91_10550	COG0745	RESPONSE REGULATOR receiver
IX91_10560	COG0840	transmembrane signaling receptor activity
IX91_10590	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IX91_10600	COG2951	lytic endotransglycosylase activity
IX91_10615	COG2894	cell division
IX91_10630	COG1454	alcohol dehydrogenase
IX91_10630	COG1012	belongs to the aldehyde dehydrogenase family
IX91_10635	COG2095	MarC family integral membrane protein
IX91_10640	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IX91_10650	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IX91_10655	COG1757	Na H antiporter
IX91_10680	COG3083	sulfuric ester hydrolase activity
IX91_10695	COG0494	nUDIX hydrolase
IX91_10700	COG0123	including yeast histone deacetylase and acetoin utilization protein
IX91_10710	COG4580	involved in the transport of maltose and maltodextrins
IX91_10715	COG1609	Transcriptional regulator
IX91_10730	COG0395	ABC-type sugar transport system, permease component
IX91_10735	COG2723	6-phospho-beta-galactosidase activity
IX91_10740	COG3842	ATPase activity
IX91_10745	COG1609	Transcriptional regulator
IX91_10755	COG1881	PFAM PEBP family protein
IX91_10770	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IX91_10775	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IX91_10795	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IX91_10800	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
IX91_10815	COG0572	uridine kinase
IX91_10820	COG0489	protein tyrosine kinase activity
IX91_10855	COG4109	DRTGG domain
IX91_10865	COG3706	GGDEF domain
IX91_10870	COG0314	molybdopterin synthase activity
IX91_10875	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
IX91_10880	COG0315	cyclic pyranopterin monophosphate synthase activity
IX91_10885	COG0521	Mo-molybdopterin cofactor biosynthetic process
IX91_10890	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
IX91_10895	COG0391	Required for morphogenesis under gluconeogenic growth conditions
IX91_10900	COG2198	Histidine kinase
IX91_10910	COG0556	nucleotide-excision repair
IX91_10935	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_10945	COG4657	Part of a membrane complex involved in electron transport
IX91_10955	COG4656	Part of a membrane complex involved in electron transport
IX91_10960	COG4658	electron transport chain
IX91_10965	COG4659	FMN binding
IX91_10975	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IX91_10980	COG0346	lactoylglutathione lyase activity
IX91_10995	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IX91_11000	COG2056	Na+-H+ antiporter family
IX91_11010	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IX91_11015	COG2716	regulation of RNA biosynthetic process
IX91_11020	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
IX91_11040	COG4783	chaperone-mediated protein folding
IX91_11045	COG1393	Belongs to the ArsC family
IX91_11060	COG3901	Regulator of nitric oxide reductase transcription
IX91_11060	COG0348	domain, Protein
IX91_11095	COG2233	PERMEase
IX91_11100	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IX91_11110	COG2877	3-deoxy-8-phosphooctulonate synthase activity
IX91_11115	COG2912	Transglutaminase-like superfamily
IX91_11120	COG3094	Invasion gene expression up-regulator, SirB
IX91_11125	COG2890	protein-(glutamine-N5) methyltransferase activity
IX91_11140	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
IX91_11150	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IX91_11275	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
IX91_11290	COG1705	Flagellar rod assembly protein muramidase FlgJ
IX91_11290	COG3951	Flagellar rod assembly protein muramidase FlgJ
IX91_11300	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
IX91_11305	COG4786	Flagellar basal body rod
IX91_11310	COG4787	bacterial-type flagellum-dependent cell motility
IX91_11315	COG1749	Flagellar hook protein flgE
IX91_11320	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
IX91_11325	COG1558	bacterial-type flagellum-dependent cell motility
IX91_11330	COG1815	bacterial-type flagellum-dependent cell motility
IX91_11335	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
IX91_11340	COG0784	Response regulator, receiver
IX91_11340	COG0835	chemotaxis
IX91_11350	COG2747	anti-sigma28 factor FlgM
IX91_11385	COG2885	chlorophyll binding
IX91_11390	COG2885	chlorophyll binding
IX91_11390	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
IX91_11410	COG2608	mercury ion transmembrane transporter activity
IX91_11410	COG2217	Heavy metal translocating P-type atpase
IX91_11435	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
IX91_11445	COG0326	Molecular chaperone. Has ATPase activity
IX91_11450	COG3710	Transcriptional regulator
IX91_11470	COG0622	Phosphoesterase
IX91_11495	COG1090	epimerase
IX91_11500	COG0300	oxidoreductase activity
IX91_11505	COG3118	belongs to the thioredoxin family
IX91_11510	COG0330	HflC and HflK could
IX91_11540	COG3115	cell septum assembly
IX91_11545	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
IX91_11550	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IX91_11555	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_11560	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IX91_11565	COG2190	(PTS) system
IX91_11570	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IX91_11575	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
IX91_11580	COG1702	phosphate starvation-inducible protein PhoH
IX91_11590	COG4535	Mg2 and Co2 transporter CorC
IX91_11595	COG0815	Transfers the fatty acyl group on membrane lipoproteins
IX91_11600	COG2888	peptidyl-tyrosine sulfation
IX91_11605	COG0495	leucyl-tRNA aminoacylation
IX91_11610	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
IX91_11615	COG1466	dna polymerase III delta subunit
IX91_11620	COG0799	negative regulation of ribosome biogenesis
IX91_11625	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IX91_11630	COG0768	penicillin binding
IX91_11635	COG0772	Belongs to the SEDS family
IX91_11640	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IX91_11645	COG1686	Belongs to the peptidase S11 family
IX91_11670	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IX91_11680	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX91_11710	COG0366	Alpha amylase catalytic
IX91_11715	COG1263	PTS System
IX91_11715	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_11720	COG1609	Transcriptional regulator
IX91_11730	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
IX91_11740	COG2011	ABC-type metal ion transport system permease component
IX91_11745	COG1464	Belongs to the NlpA lipoprotein family
IX91_11755	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
IX91_11765	COG1720	tRNA m6t6A37 methyltransferase activity
IX91_11780	COG0121	glutamine amidotransferase
IX91_11785	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
IX91_11790	COG1960	acyl-CoA dehydrogenase activity
IX91_11800	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IX91_11810	COG2226	methyltransferase
IX91_11820	COG1388	LysM domain
IX91_11820	COG0741	lytic transglycosylase activity
IX91_11835	COG0347	Belongs to the P(II) protein family
IX91_11855	COG0587	DNA-directed DNA polymerase activity
IX91_11865	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IX91_11880	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IX91_11885	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
IX91_11890	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IX91_11895	COG0750	zinc metalloprotease
IX91_11900	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
IX91_11905	COG0575	Belongs to the CDS family
IX91_11910	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IX91_11915	COG0233	cytoplasmic translational termination
IX91_11935	COG0024	Methionine aminopeptidase
IX91_11950	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IX91_11980	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IX91_11980	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IX91_11985	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IX91_11990	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
IX91_11995	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
IX91_12015	COG2252	PERMEase
IX91_12025	COG2195	Cleaves the N-terminal amino acid of tripeptides
IX91_12030	COG4067	protein conserved in archaea
IX91_12030	COG0189	ligase activity
IX91_12035	COG0189	ligase activity
IX91_12045	COG0733	neurotransmitter:sodium symporter activity
IX91_12050	COG5001	Diguanylate cyclase
IX91_12050	COG4251	negative regulation of phosphorylation
IX91_12050	COG3706	GGDEF domain
IX91_12050	COG2203	Gaf domain
IX91_12065	COG0514	ATP-dependent DNA helicase (RecQ)
IX91_12070	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IX91_12075	COG0745	RESPONSE REGULATOR receiver
IX91_12075	COG3706	GGDEF domain
IX91_12080	COG2991	Protein conserved in bacteria
IX91_12085	COG1477	protein flavinylation
IX91_12090	COG2871	sodium ion transport
IX91_12095	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IX91_12100	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IX91_12110	COG1805	sodium ion transport
IX91_12115	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
IX91_12120	COG0271	Belongs to the BolA IbaG family
IX91_12135	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IX91_12140	COG2211	Major facilitator Superfamily
IX91_12150	COG1595	DNA-templated transcription, initiation
IX91_12165	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IX91_12170	COG0693	protein deglycase activity
IX91_12175	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IX91_12180	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
IX91_12190	COG0560	Phosphoserine phosphatase
IX91_12200	COG0813	purine-nucleoside phosphorylase activity
IX91_12205	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
IX91_12210	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
IX91_12225	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IX91_12230	COG0084	hydrolase, TatD family'
IX91_12240	COG3022	response to hydroperoxide
IX91_12245	COG1115	amino acid carrier protein
IX91_12265	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IX91_12280	COG0583	DNA-binding transcription factor activity
IX91_12285	COG0730	response to heat
IX91_12290	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
IX91_12295	COG0505	Belongs to the CarA family
IX91_12310	COG0494	nUDIX hydrolase
IX91_12315	COG0653	protein targeting
IX91_12330	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IX91_12335	COG0849	cell division
IX91_12340	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
IX91_12355	COG0772	Belongs to the SEDS family
IX91_12365	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IX91_12370	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IX91_12380	COG0768	penicillin binding
IX91_12385	COG3116	cell division
IX91_12395	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
IX91_12400	COG3107	peptidoglycan biosynthetic process
IX91_12410	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
IX91_12420	COG2969	positive regulation of protein catabolic process
IX91_12425	COG0625	glutathione transferase activity
IX91_12430	COG2857	Cytochrome c1
IX91_12435	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
IX91_12440	COG0723	plastoquinol--plastocyanin reductase activity
IX91_12460	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
IX91_12465	COG3105	Protein conserved in bacteria
IX91_12470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IX91_12475	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IX91_12485	COG0187	DNA topoisomerase II activity
IX91_12490	COG3150	esterase
IX91_12500	COG3151	Protein conserved in bacteria
IX91_12505	COG0494	nUDIX hydrolase
IX91_12510	COG1538	Outer membrane efflux protein
IX91_12520	COG0784	Response regulator, receiver
IX91_12520	COG5002	protein histidine kinase activity
IX91_12520	COG2198	Histidine kinase
IX91_12525	COG5001	Diguanylate cyclase
IX91_12525	COG4251	negative regulation of phosphorylation
IX91_12525	COG2203	Gaf domain
IX91_12525	COG3706	GGDEF domain
IX91_12530	COG1242	4 iron, 4 sulfur cluster binding
IX91_12535	COG0070	glutamate synthase
IX91_12535	COG0067	glutamate synthase
IX91_12535	COG0069	glutamate synthase activity
IX91_12550	COG0069	glutamate synthase activity
IX91_12550	COG0067	glutamate synthase
IX91_12550	COG0070	glutamate synthase
IX91_12555	COG0493	'glutamate synthase
IX91_12580	COG0195	Participates in both transcription termination and antitermination
IX91_12585	COG0779	Required for maturation of 30S ribosomal subunits
IX91_12600	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
IX91_12610	COG3153	acetyltransferase
IX91_12635	COG0534	Mate efflux family protein
IX91_12675	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IX91_12680	COG2860	membrane
IX91_12685	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
IX91_12715	COG0745	RESPONSE REGULATOR receiver
IX91_12725	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
IX91_12735	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IX91_12740	COG3025	triphosphatase activity
IX91_12745	COG1392	Phosphate transport regulator
IX91_12750	COG0306	phosphate transporter
IX91_12755	COG4991	sh3 domain protein
IX91_12765	COG3267	Type II secretory pathway component ExeA
IX91_12765	COG3409	Peptidoglycan-binding domain 1 protein
IX91_12775	COG0148	phosphopyruvate hydratase activity
IX91_12785	COG3956	TIGRFAM MazG family protein
IX91_12790	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IX91_12795	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IX91_12800	COG4999	Histidine kinase
IX91_12800	COG2205	protein histidine kinase activity
IX91_12800	COG3850	Histidine kinase
IX91_12800	COG3437	response regulator, receiver
IX91_12805	COG0736	holo-[acyl-carrier-protein] synthase activity
IX91_12815	COG1381	Involved in DNA repair and RecF pathway recombination
IX91_12820	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IX91_12830	COG0681	Belongs to the peptidase S26 family
IX91_12840	COG3086	response to oxidative stress
IX91_12845	COG3026	antisigma factor binding
IX91_12855	COG1595	DNA-templated transcription, initiation
IX91_12860	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
IX91_12870	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
IX91_12890	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IX91_12895	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IX91_12905	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
IX91_12915	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IX91_12920	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IX91_12925	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IX91_12935	COG0028	Belongs to the TPP enzyme family
IX91_12940	COG1022	Amp-dependent synthetase and ligase
IX91_12945	COG0583	DNA-binding transcription factor activity
IX91_12965	COG0473	3-isopropylmalate dehydrogenase activity
IX91_13035	COG3437	response regulator, receiver
IX91_13120	COG2918	glutathione biosynthetic process
IX91_13125	COG0612	Peptidase, M16
IX91_13130	COG1238	metal cluster binding
IX91_13140	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
IX91_13145	COG5016	pyruvate
IX91_13145	COG0511	ligase activity, forming carbon-carbon bonds
IX91_13150	COG3630	sodium ion export across plasma membrane
IX91_13200	COG0527	aspartate kinase activity
IX91_13215	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IX91_13220	COG1546	Belongs to the CinA family
IX91_13225	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
IX91_13230	COG0795	lipopolysaccharide-transporting ATPase activity
IX91_13235	COG0795	lipopolysaccharide-transporting ATPase activity
IX91_13245	COG2927	DNA polymerase III (CHI subunit)
IX91_13250	COG0525	valine-tRNA ligase activity
IX91_13260	COG4269	membrane
IX91_13270	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IX91_13275	COG0564	pseudouridine synthase activity
IX91_13280	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
IX91_13285	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
IX91_13300	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
IX91_13305	COG0251	oxidation-reduction process
IX91_13315	COG0039	L-malate dehydrogenase activity
IX91_13335	COG0589	response to stress
IX91_13360	COG2235	arginine
IX91_13365	COG0312	modulator of DNA gyrase
IX91_13370	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IX91_13375	COG3164	Protein of unknown function
IX91_13380	COG1530	ribonuclease E activity
IX91_13390	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
IX91_13395	COG1792	Involved in formation and maintenance of cell shape
IX91_13400	COG1077	Cell shape determining protein MreB Mrl
IX91_13445	COG1459	type II secretion system
IX91_13450	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IX91_13460	COG3409	Peptidoglycan-binding domain 1 protein
IX91_13460	COG3267	Type II secretory pathway component ExeA
IX91_13485	COG2200	EAL domain
IX91_13485	COG2199	diguanylate cyclase activity
IX91_13490	COG0629	single-stranded DNA binding
IX91_13495	COG2197	response regulator
IX91_13505	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
IX91_13515	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
IX91_13520	COG0527	aspartate kinase activity
IX91_13525	COG0312	modulator of DNA gyrase
IX91_13530	COG3028	Belongs to the UPF0307 family
IX91_13535	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
IX91_13540	COG1178	ABC-type Fe3 transport system permease component
IX91_13545	COG4143	(ABC) transporter
IX91_13550	COG0163	prenyltransferase activity
IX91_13555	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IX91_13570	COG2105	PFAM AIG2 family protein
IX91_13575	COG2911	Protein conserved in bacteria
IX91_13580	COG0729	surface antigen
IX91_13585	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IX91_13590	COG0745	RESPONSE REGULATOR receiver
IX91_13590	COG4566	intracellular signal transduction
IX91_13595	COG0004	ammonium transporteR
IX91_13605	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
IX91_13620	COG1136	(ABC) transporter
IX91_13650	COG0432	Pfam Uncharacterised protein family UPF0047
IX91_13665	COG0251	oxidation-reduction process
IX91_13675	COG2964	Protein conserved in bacteria
IX91_13685	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IX91_13690	COG0305	Participates in initiation and elongation during chromosome replication
IX91_13710	COG2965	DNA replication, synthesis of RNA primer
IX91_13720	COG2194	sulfuric ester hydrolase activity
IX91_13725	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IX91_13735	COG2906	2 iron, 2 sulfur cluster binding
IX91_13740	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IX91_13745	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IX91_13760	COG2168	tRNA wobble position uridine thiolation
IX91_13765	COG2923	Belongs to the DsrF TusC family
IX91_13770	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
IX91_13775	COG2964	Protein conserved in bacteria
IX91_13780	COG0545	Peptidyl-prolyl cis-trans isomerase
IX91_13790	COG2900	Belongs to the SlyX family
IX91_13795	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
IX91_13800	COG0330	HflC and HflK could
IX91_13805	COG0330	HflC and HflK could
IX91_13810	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IX91_13825	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IX91_13835	COG0802	atpase or kinase
IX91_13840	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IX91_13905	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
IX91_13910	COG1162	GTPase activity
IX91_13920	COG0490	domain, Protein
IX91_13920	COG0471	metal ion transport
IX91_13925	COG0840	transmembrane signaling receptor activity
IX91_13940	COG4942	peptidase
IX91_13965	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
IX91_13975	COG0085	RNA polymerase activity
IX91_13985	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IX91_14000	COG0250	Participates in transcription elongation, termination and antitermination
IX91_14005	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
IX91_14010	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IX91_14035	COG1072	(Pantothenic acid kinase))
IX91_14050	COG0149	triose-phosphate isomerase activity
IX91_14055	COG0534	Mate efflux family protein
IX91_14060	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IX91_14065	COG1575	Belongs to the MenA family. Type 1 subfamily
IX91_14070	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IX91_14075	COG1509	lysine 2,3-aminomutase activity
IX91_14085	COG1285	pathogenesis
IX91_14090	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
IX91_14100	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
IX91_14110	COG0745	RESPONSE REGULATOR receiver
IX91_14115	COG2205	protein histidine kinase activity
IX91_14120	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IX91_14125	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
IX91_14130	COG0180	Tryptophanyl-tRNA synthetase
IX91_14135	COG0546	phosphoglycolate phosphatase activity
IX91_14140	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
IX91_14145	COG0338	D12 class N6 adenine-specific DNA methyltransferase
IX91_14190	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
IX91_14200	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IX91_14200	COG0678	peroxiredoxin activity
IX91_14205	COG0251	oxidation-reduction process
IX91_14220	COG0165	Argininosuccinate lyase
IX91_14220	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
IX91_14230	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
IX91_14235	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
IX91_14245	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
IX91_14250	COG1695	Transcriptional regulator
IX91_14255	COG1045	serine acetyltransferase
IX91_14270	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IX91_14305	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IX91_14310	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
IX91_14315	COG1053	succinate dehydrogenase
IX91_14320	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IX91_14335	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX91_14355	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IX91_14360	COG1609	Transcriptional regulator
IX91_14365	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IX91_14375	COG0281	malic enzyme
IX91_14385	COG0626	cystathionine gamma-synthase activity
IX91_14390	COG0460	homoserine dehydrogenase
IX91_14390	COG0527	aspartate kinase activity
IX91_14395	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
IX91_14405	COG1494	fructose-1,6-bisphosphatase
IX91_14505	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
IX91_14510	COG0534	Mate efflux family protein
IX91_14525	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IX91_14530	COG2937	Belongs to the GPAT DAPAT family
IX91_14535	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
IX91_14540	COG3161	chorismate lyase activity
IX91_14545	COG1580	Controls the rotational direction of flagella during chemotaxis
IX91_14550	COG0705	Rhomboid family
IX91_14555	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IX91_14565	COG2177	Part of the ABC transporter FtsEX involved in
IX91_14570	COG2884	Cell division ATP-binding protein ftsE
IX91_14575	COG0552	protein localization to endoplasmic reticulum
IX91_14580	COG0742	ribosomal rna small subunit methyltransferase
IX91_14590	COG2095	MarC family integral membrane protein
IX91_14635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IX91_14640	COG0640	Transcriptional regulator
IX91_14645	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
IX91_14650	COG1280	lysine exporter protein (LysE YggA)
IX91_14655	COG2267	carboxylic ester hydrolase activity
IX91_14660	COG0561	phosphatase activity
IX91_14680	COG2199	diguanylate cyclase activity
IX91_14680	COG3287	FIST C domain
IX91_14680	COG2200	EAL domain
IX91_14685	COG1011	Hydrolase
IX91_14690	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
IX91_14700	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
IX91_14705	COG0019	diaminopimelate decarboxylase activity
IX91_14715	COG1965	Belongs to the frataxin family
IX91_14720	COG3072	Adenylate cyclase
IX91_14730	COG1587	Uroporphyrinogen-III synthase
IX91_14735	COG2959	enzyme of heme biosynthesis
IX91_14740	COG3071	HemY protein
IX91_14825	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
IX91_14835	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
IX91_14840	COG3118	belongs to the thioredoxin family
IX91_14850	COG0248	Ppx GppA phosphatase
IX91_14855	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
IX91_14865	COG0514	ATP-dependent DNA helicase (RecQ)
IX91_14870	COG2962	Rard protein
IX91_14880	COG1280	lysine exporter protein (LysE YggA)
IX91_14885	COG0405	Gamma-glutamyltransferase
IX91_14895	COG0210	DNA helicase
IX91_14905	COG3220	belongs to the UPF0276 family
IX91_14930	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
IX91_14940	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IX91_14960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IX91_14970	COG0747	negative chemotaxis
IX91_14975	COG4172	Belongs to the ABC transporter superfamily
IX91_15015	COG1309	transcriptional regulator
IX91_15020	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX91_15025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX91_15030	COG2960	long-chain fatty acid transporting porin activity
IX91_15045	COG0583	DNA-binding transcription factor activity
IX91_15050	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IX91_15075	COG0218	Necessary for normal cell division and for the maintenance of normal septation
IX91_15080	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IX91_15080	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IX91_15095	COG0084	hydrolase, TatD family'
IX91_15100	COG0805	protein transport
IX91_15105	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IX91_15130	COG1322	Protein conserved in bacteria
IX91_15140	COG1639	'signal transduction protein
IX91_15155	COG2081	HI0933 family
IX91_15165	COG1528	Iron-storage protein
IX91_15170	COG0589	response to stress
IX91_15175	COG0697	spore germination
IX91_15185	COG0742	ribosomal rna small subunit methyltransferase
IX91_15190	COG5002	protein histidine kinase activity
IX91_15190	COG5001	Diguanylate cyclase
IX91_15195	COG1522	sequence-specific DNA binding
IX91_15215	COG0006	proline dipeptidase activity
IX91_15215	COG0006	proline dipeptidase activity
IX91_15230	COG2104	thiamine diphosphate biosynthetic process
IX91_15235	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
IX91_15250	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IX91_15255	COG2132	Multicopper oxidase
IX91_15315	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
IX91_15320	COG1739	Uncharacterized protein family UPF0029
IX91_15330	COG0183	Belongs to the thiolase family
IX91_15335	COG0583	DNA-binding transcription factor activity
IX91_15340	COG2814	Major facilitator Superfamily
IX91_15350	COG0765	amino acid transport
IX91_15360	COG0355	proton-transporting ATP synthase activity, rotational mechanism
IX91_15365	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IX91_15370	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IX91_15385	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IX91_15400	COG3312	ion transport
IX91_15405	COG1475	DNA binding
IX91_15410	COG1192	Involved in chromosome partitioning
IX91_15415	COG0357	Ribosomal RNA small subunit methyltransferase G
IX91_15420	COG0445	tRNA wobble uridine modification
IX91_15425	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
IX91_15430	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
IX91_15435	COG0706	membrane insertase activity
IX91_15440	COG0594	ribonuclease P activity
IX91_15450	COG1126	abc transporter atp-binding protein
IX91_15480	COG1444	tRNA N-acetyltransferase activity
IX91_15490	COG0745	RESPONSE REGULATOR receiver
IX91_15500	COG0835	chemotaxis
IX91_15505	COG0835	chemotaxis
IX91_15510	COG0840	transmembrane signaling receptor activity
IX91_15515	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
IX91_15540	COG3706	GGDEF domain
IX91_15540	COG0745	RESPONSE REGULATOR receiver
IX91_15555	COG2176	DNA-directed DNA polymerase activity
IX91_15560	COG0646	methionine synthase
IX91_15560	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
IX91_15565	COG3214	Protein conserved in bacteria
IX91_15570	COG2814	Major facilitator Superfamily
IX91_15615	COG3706	GGDEF domain
IX91_15650	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
IX91_15655	COG1757	Na H antiporter
IX91_15660	COG1609	Transcriptional regulator
IX91_15665	COG2258	MOSC domain
IX91_15675	COG1522	sequence-specific DNA binding
IX91_15680	COG1280	lysine exporter protein (LysE YggA)
IX91_15690	COG2267	carboxylic ester hydrolase activity
IX91_15700	COG1917	Cupin 2, conserved barrel domain protein
IX91_15700	COG4977	sequence-specific DNA binding
IX91_15710	COG0456	acetyltransferase
IX91_15715	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IX91_15720	COG0662	Cupin 2, conserved barrel domain protein
IX91_15725	COG0527	aspartate kinase activity
IX91_15730	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
IX91_15735	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IX91_15740	COG0251	oxidation-reduction process
IX91_15765	COG2964	Protein conserved in bacteria
IX91_15770	COG0006	proline dipeptidase activity
IX91_15780	COG1473	amidohydrolase
IX91_15785	COG0583	DNA-binding transcription factor activity
IX91_15800	COG2814	Major facilitator Superfamily
IX91_15840	COG1136	(ABC) transporter
IX91_15860	COG2188	Transcriptional regulator
IX91_15865	COG1131	(ABC) transporter
IX91_15885	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
IX91_15895	COG4145	pantothenate transmembrane transporter activity
IX91_15900	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_15905	COG0800	Aldolase
IX91_15935	COG0242	peptide deformylase activity
IX91_15960	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
IX91_15965	COG3639	organic phosphonate transmembrane transporter activity
IX91_15970	COG3639	organic phosphonate transmembrane transporter activity
IX91_16000	COG2814	Major facilitator Superfamily
IX91_16010	COG0583	DNA-binding transcription factor activity
IX91_16025	COG1418	mRNA catabolic process
IX91_16040	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IX91_16050	COG2226	methyltransferase
IX91_16055	COG0242	peptide deformylase activity
IX91_16070	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IX91_16085	COG0583	DNA-binding transcription factor activity
IX91_16130	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
IX91_16135	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
IX91_16150	COG3655	Transcriptional regulator
IX91_16180	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IX91_16200	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_16200	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_16200	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_16205	COG0383	alpha-mannosidase activity
IX91_16215	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_16215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_16215	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_16220	COG1482	cell wall glycoprotein biosynthetic process
IX91_16225	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IX91_16240	COG1012	belongs to the aldehyde dehydrogenase family
IX91_16250	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX91_16265	COG1280	lysine exporter protein (LysE YggA)
IX91_16275	COG1609	Transcriptional regulator
IX91_16280	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_16305	COG0110	maltose O-acetyltransferase activity
IX91_16310	COG0583	DNA-binding transcription factor activity
IX91_16380	COG4266	Belongs to the allantoicase family
IX91_16385	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
IX91_16395	COG0840	transmembrane signaling receptor activity
IX91_16405	COG1404	Belongs to the peptidase S8 family
IX91_16415	COG0559	Belongs to the binding-protein-dependent transport system permease family
IX91_16440	COG0831	urea catabolic process
IX91_16445	COG0832	Belongs to the urease beta subunit family
IX91_16450	COG0804	urea catabolic process
IX91_16455	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
IX91_16470	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
IX91_16485	COG5002	protein histidine kinase activity
IX91_16485	COG0784	Response regulator, receiver
IX91_16485	COG2205	protein histidine kinase activity
IX91_16490	COG0840	transmembrane signaling receptor activity
IX91_16495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_16500	COG0402	S-adenosylhomocysteine deaminase activity
IX91_16510	COG1529	Aldehyde oxidase and xanthine dehydrogenase
IX91_16520	COG2186	Transcriptional regulator
IX91_16550	COG0010	Belongs to the arginase family
IX91_16555	COG1166	arginine decarboxylase activity
IX91_16565	COG3122	Protein conserved in bacteria
IX91_16570	COG1278	Cold shock
IX91_16580	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
IX91_16590	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_16595	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IX91_16600	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IX91_16625	COG2986	histidine ammonia-lyase
IX91_16650	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IX91_16655	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IX91_16695	COG2199	diguanylate cyclase activity
IX91_16695	COG2200	EAL domain
IX91_16710	COG1301	dicarboxylic acid transport
IX91_16715	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IX91_16720	COG1280	lysine exporter protein (LysE YggA)
IX91_16725	COG0393	Putative heavy-metal-binding
IX91_16730	COG1671	Belongs to the UPF0178 family
IX91_16745	COG2515	1-aminocyclopropane-1-carboxylate deaminase
IX91_16750	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_16760	COG3291	Pkd domain containing protein
IX91_16765	COG3568	Endonuclease Exonuclease Phosphatase
IX91_16790	COG0589	response to stress
IX91_16820	COG0800	Aldolase
IX91_16825	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_16835	COG0246	Mannitol dehydrogenase
IX91_16845	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
IX91_16860	COG2186	Transcriptional regulator
IX91_16875	COG2188	Transcriptional regulator
IX91_16885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_16890	COG1397	ADP-ribosylglycohydrolase
IX91_16895	COG2211	Major facilitator Superfamily
IX91_16905	COG0024	Methionine aminopeptidase
IX91_16910	COG4628	conserved protein (DUF2132)
IX91_16930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IX91_16935	COG0601	transmembrane transport
IX91_16960	COG5001	Diguanylate cyclase
IX91_16960	COG5002	protein histidine kinase activity
IX91_16970	COG1653	transport
IX91_16975	COG3275	phosphorelay sensor kinase activity
IX91_16980	COG0745	RESPONSE REGULATOR receiver
IX91_16995	COG3938	Belongs to the proline racemase family
IX91_17000	COG2022	thiamine diphosphate biosynthetic process
IX91_17000	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IX91_17005	COG2423	ornithine cyclodeaminase activity
IX91_17020	COG2814	Major facilitator Superfamily
IX91_17035	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IX91_17040	COG0346	lactoylglutathione lyase activity
IX91_17065	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
IX91_17080	COG0583	DNA-binding transcription factor activity
IX91_17090	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_17095	COG0183	Belongs to the thiolase family
IX91_17110	COG1683	Conserved Protein
IX91_17125	COG3383	formate dehydrogenase (NAD+) activity
IX91_17130	COG0437	4 iron, 4 sulfur cluster binding
IX91_17135	COG0348	domain, Protein
IX91_17140	COG0488	(ABC) transporter
IX91_17145	COG3706	GGDEF domain
IX91_17180	COG0697	spore germination
IX91_17200	COG3706	GGDEF domain
IX91_17200	COG0745	RESPONSE REGULATOR receiver
IX91_17225	COG0456	acetyltransferase
IX91_17235	COG0346	lactoylglutathione lyase activity
IX91_17240	COG0561	phosphatase activity
IX91_17250	COG3852	Histidine kinase
IX91_17310	COG0366	Alpha amylase catalytic
IX91_17325	COG2211	Major facilitator Superfamily
IX91_17330	COG0668	transmembrane transport
IX91_17350	COG1032	radical SAM domain protein
IX91_17390	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
IX91_17395	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
IX91_17400	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
IX91_17405	COG3265	gluconokinase activity
IX91_17410	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
IX91_17415	COG1609	Transcriptional regulator
IX91_17510	COG1280	lysine exporter protein (LysE YggA)
IX91_17530	COG1396	sequence-specific DNA binding
IX91_17550	COG4191	Histidine kinase
IX91_17550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_17590	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
IX91_17620	COG1733	regulation of RNA biosynthetic process
IX91_17640	COG1403	HNH endonuclease
IX91_17670	COG0509	glycine decarboxylation via glycine cleavage system
IX91_17675	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IX91_17685	COG0404	The glycine cleavage system catalyzes the degradation of glycine
IX91_17705	COG0004	ammonium transporteR
IX91_17715	COG1869	D-ribose catabolic process
IX91_17720	COG1129	ABC transporter
IX91_17725	COG1172	Belongs to the binding-protein-dependent transport system permease family
IX91_17730	COG1879	ABC-type sugar transport system periplasmic component
IX91_17735	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_17745	COG0784	Response regulator, receiver
IX91_17745	COG3437	response regulator, receiver
IX91_17750	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_17750	COG4191	Histidine kinase
IX91_17760	COG0835	chemotaxis
IX91_17760	COG0784	Response regulator, receiver
IX91_17775	COG0840	transmembrane signaling receptor activity
IX91_17780	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
IX91_17785	COG0573	inorganic phosphate transmembrane transporter activity
IX91_17790	COG0581	inorganic phosphate transmembrane transporter activity
IX91_17805	COG3706	GGDEF domain
IX91_17840	COG0739	heme binding
IX91_17845	COG3047	cAMP biosynthetic process
IX91_17865	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
IX91_17870	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IX91_17880	COG0848	biopolymer transport protein
IX91_17885	COG0811	peptide transport
IX91_17890	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
IX91_17900	COG3721	Heme iron utilization protein
IX91_17905	COG0748	coenzyme F420 binding
IX91_17910	COG2096	Adenosyltransferase
IX91_17920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX91_17960	COG0840	transmembrane signaling receptor activity
IX91_17965	COG1366	Belongs to the anti-sigma-factor antagonist family
IX91_17975	COG2172	sigma factor antagonist activity
IX91_17985	COG2205	protein histidine kinase activity
IX91_17985	COG3437	response regulator, receiver
IX91_17985	COG3850	Histidine kinase
IX91_17985	COG4999	Histidine kinase
IX91_17990	COG3437	response regulator, receiver
IX91_18005	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
IX91_18005	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IX91_18010	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
IX91_18020	COG0291	Belongs to the bacterial ribosomal protein bL35 family
IX91_18045	COG2226	methyltransferase
IX91_18075	COG0384	phenazine biosynthesis protein PhzF
IX91_18090	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IX91_18095	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IX91_18100	COG3186	Phenylalanine-4-hydroxylase
IX91_18150	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IX91_18155	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IX91_18175	COG1136	(ABC) transporter
IX91_18180	COG4591	ABC-type transport system involved in lipoprotein release permease component
IX91_18195	COG3275	phosphorelay sensor kinase activity
IX91_18200	COG3279	Response regulator of the LytR AlgR family
IX91_18215	COG5002	protein histidine kinase activity
IX91_18250	COG0366	Alpha amylase catalytic
IX91_18260	COG2182	Extracellular solute-binding protein
IX91_18265	COG0366	Alpha amylase catalytic
IX91_18285	COG4948	Mandelate Racemase Muconate Lactonizing
IX91_18295	COG0583	DNA-binding transcription factor activity
IX91_18300	COG0443	Heat shock 70 kDa protein
IX91_18305	COG0840	transmembrane signaling receptor activity
IX91_18345	COG1357	PFAM Pentapeptide repeats (8 copies)
IX91_18350	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
IX91_18360	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
IX91_18420	COG3300	MHYT domain
IX91_18420	COG5001	Diguanylate cyclase
IX91_18425	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
IX91_18460	COG1309	transcriptional regulator
IX91_18480	COG0745	RESPONSE REGULATOR receiver
IX91_18520	COG0625	glutathione transferase activity
IX91_18525	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IX91_18530	COG0366	Alpha amylase catalytic
IX91_18535	COG4166	transmembrane transport
IX91_18545	COG2084	Dehydrogenase
IX91_18550	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
IX91_18560	COG2130	NADP-dependent
IX91_18565	COG1309	transcriptional regulator
IX91_18570	COG3706	GGDEF domain
IX91_18580	COG0513	Belongs to the DEAD box helicase family
IX91_18600	COG0564	pseudouridine synthase activity
IX91_18610	COG0583	DNA-binding transcription factor activity
IX91_18615	COG2375	cellular response to nickel ion
IX91_18630	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
IX91_18640	COG0516	GMP reductase activity
IX91_18665	COG0516	GMP reductase activity
IX91_18690	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IX91_18700	COG1120	ATPase activity
IX91_18705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IX91_18715	COG4615	Cyclic peptide transporter
IX91_18735	COG4774	siderophore transport
IX91_18755	COG0745	RESPONSE REGULATOR receiver
IX91_18760	COG0784	Response regulator, receiver
IX91_18760	COG5002	protein histidine kinase activity
IX91_18760	COG2205	protein histidine kinase activity
IX91_18770	COG1012	belongs to the aldehyde dehydrogenase family
IX91_18790	COG4175	Glycine betaine
IX91_18795	COG1263	PTS System
IX91_18795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_18800	COG2205	protein histidine kinase activity
IX91_18840	COG1012	belongs to the aldehyde dehydrogenase family
IX91_18845	COG3284	Transcriptional regulator
IX91_18865	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
IX91_18885	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
IX91_18890	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
IX91_18910	COG0673	inositol 2-dehydrogenase activity
IX91_18920	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
IX91_18960	COG1304	FMN binding
IX91_18965	COG1620	l-lactate permease
IX91_18970	COG0583	DNA-binding transcription factor activity
IX91_18975	COG4172	Belongs to the ABC transporter superfamily
IX91_18985	COG1067	ATP-dependent peptidase activity
IX91_18990	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IX91_19000	COG0840	transmembrane signaling receptor activity
IX91_19010	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
IX91_19015	COG1522	sequence-specific DNA binding
IX91_19020	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IX91_19025	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IX91_19035	COG0583	DNA-binding transcription factor activity
IX91_19050	COG0583	DNA-binding transcription factor activity
IX91_19070	COG4964	Belongs to the GSP D family
IX91_19125	COG2897	thiosulfate sulfurtransferase activity
IX91_19140	COG0303	'Molybdopterin
IX91_19150	COG0513	Belongs to the DEAD box helicase family
IX91_19165	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IX91_19165	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IX91_19170	COG0814	amino acid
IX91_19180	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
IX91_19185	COG0513	Belongs to the DEAD box helicase family
IX91_19205	COG0456	acetyltransferase
IX91_19205	COG1214	PFAM Peptidase M22, glycoprotease
IX91_19230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IX91_19235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IX91_19250	COG0546	phosphoglycolate phosphatase activity
IX91_19255	COG1803	Methylglyoxal synthase
IX91_19260	COG1879	ABC-type sugar transport system periplasmic component
IX91_19265	COG0784	Response regulator, receiver
IX91_19265	COG2205	protein histidine kinase activity
IX91_19265	COG2198	Histidine kinase
IX91_19280	COG1979	alcohol dehydrogenase
IX91_19285	COG2207	Transcriptional regulator
IX91_19295	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
IX91_19300	COG3706	GGDEF domain
IX91_19305	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_19305	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
IX91_19305	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IX91_19310	COG1105	Belongs to the carbohydrate kinase PfkB family
IX91_19315	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_19315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IX91_19320	COG1609	Transcriptional regulator
IX91_19330	COG3111	PFAM Bacterial OB fold (BOF) protein
IX91_19335	COG1492	cobalamin metabolic process
IX91_19340	COG0725	ABC transporter, periplasmic molybdate-binding protein
IX91_19345	COG4149	molybdate abc transporter
IX91_19350	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
IX91_19360	COG5001	Diguanylate cyclase
IX91_19360	COG4251	negative regulation of phosphorylation
IX91_19360	COG3706	GGDEF domain
IX91_19360	COG2203	Gaf domain
IX91_19365	COG3706	GGDEF domain
IX91_19380	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
IX91_19385	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
IX91_19395	COG0745	RESPONSE REGULATOR receiver
IX91_19485	COG1876	peptidase activity
IX91_19590	COG0023	Translation Initiation Factor
IX91_19605	COG1181	Belongs to the D-alanine--D-alanine ligase family
IX91_19610	COG3266	domain, Protein
IX91_19615	COG1042	CoA-binding domain protein
IX91_19615	COG0045	succinate-CoA ligase (ADP-forming) activity
IX91_19615	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IX91_19625	COG0798	PFAM Bile acid sodium symporter
IX91_19630	COG1716	ATPase activity
IX91_19630	COG5001	Diguanylate cyclase
IX91_19655	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IX91_19685	COG0156	8-amino-7-oxononanoate synthase activity
IX91_19710	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
IX91_19715	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IX91_19720	COG0363	glucosamine-6-phosphate deaminase activity
IX91_19725	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
IX91_19735	COG0583	DNA-binding transcription factor activity
IX91_19740	COG4771	TonB-dependent receptor
IX91_19740	COG1629	transport
IX91_19760	COG2050	protein possibly involved in aromatic compounds catabolism
IX91_19765	COG4783	chaperone-mediated protein folding
IX91_19770	COG0750	zinc metalloprotease
IX91_19805	COG0737	Belongs to the 5'-nucleotidase family
IX91_19810	COG3593	DNA synthesis involved in DNA repair
IX91_19820	COG0583	DNA-binding transcription factor activity
IX91_19830	COG2116	formate transmembrane transporter activity
IX91_19835	COG2353	YceI-like domain
IX91_19840	COG3038	cytochrome b561
IX91_19865	COG3069	C4-dicarboxylate transmembrane transporter activity
IX91_19870	COG2197	response regulator
IX91_19875	COG3850	Histidine kinase
IX91_19880	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
IX91_19880	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IX91_19915	COG3300	MHYT domain
IX91_19915	COG5001	Diguanylate cyclase
IX91_19920	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
IX91_19930	COG1984	allophanate hydrolase subunit 2
IX91_19940	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
IX91_19945	COG4181	ATPase activity
IX91_19955	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
IX91_19960	COG1716	ATPase activity
IX91_19960	COG5001	Diguanylate cyclase
IX91_19975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IX91_19980	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IX91_19980	COG1116	anion transmembrane transporter activity
IX91_19990	COG0484	heat shock protein binding
IX91_20015	COG0210	DNA helicase
IX91_20020	COG1289	transmembrane transporter activity
IX91_20040	COG2205	protein histidine kinase activity
IX91_20040	COG0784	Response regulator, receiver
IX91_20045	COG1879	ABC-type sugar transport system periplasmic component
IX91_20055	COG2827	Endonuclease containing a URI domain
IX91_20095	COG0545	Peptidyl-prolyl cis-trans isomerase
IX91_20100	COG0494	nUDIX hydrolase
IX91_20105	COG0189	ligase activity
IX91_20105	COG4067	protein conserved in archaea
IX91_20115	COG0602	queuosine metabolic process
IX91_20120	COG1328	CTP reductase activity
IX91_20140	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX91_20185	COG4412	M6 family metalloprotease domain protein
IX91_20185	COG3291	Pkd domain containing protein
IX91_20195	COG3240	lipase activity
IX91_20200	COG2814	Major facilitator Superfamily
IX91_20205	COG1794	racemase activity, acting on amino acids and derivatives
IX91_20220	COG0183	Belongs to the thiolase family
IX91_20240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX91_20245	COG1309	transcriptional regulator
IX91_20270	COG4628	conserved protein (DUF2132)
IX91_20295	COG0625	glutathione transferase activity
IX91_20300	COG1280	lysine exporter protein (LysE YggA)
IX91_20335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IX91_20380	COG2801	Transposase and inactivated derivatives
IX91_20460	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IX91_20465	COG3300	MHYT domain
IX91_20465	COG5001	Diguanylate cyclase
IX91_20475	COG1609	Transcriptional regulator
IX91_20475	COG2207	Transcriptional regulator
IX91_20485	COG0789	Transcriptional regulator
IX91_20490	COG4604	ABC transporter, ATP-binding protein
IX91_20495	COG4605	iron ion homeostasis
IX91_20500	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IX91_20530	COG5001	Diguanylate cyclase
IX91_20540	COG4172	Belongs to the ABC transporter superfamily
IX91_20545	COG4239	(ABC) transporter, permease
IX91_20550	COG4174	ABC transporter (Permease)
IX91_20555	COG4166	transmembrane transport
IX91_20560	COG0840	transmembrane signaling receptor activity
IX91_20565	COG3706	GGDEF domain
IX91_20575	COG0582	viral genome integration into host DNA
IX91_20595	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
IX91_20615	COG3311	Transcriptional regulator
IX91_20625	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IX91_20630	COG0523	cobalamin synthesis protein
IX91_20635	COG0038	chloride channel
IX91_20645	COG0156	8-amino-7-oxononanoate synthase activity
IX91_20650	COG0784	Response regulator, receiver
IX91_20650	COG2205	protein histidine kinase activity
IX91_20655	COG0419	ATPase involved in DNA repair
IX91_20660	COG0420	3'-5' exonuclease activity
IX91_20665	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IX91_20670	COG3118	belongs to the thioredoxin family
IX91_20675	COG0477	Major facilitator Superfamily
IX91_20710	COG2146	nitrite reductase [NAD(P)H] activity
IX91_20715	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IX91_20715	COG2146	nitrite reductase [NAD(P)H] activity
IX91_20720	COG1116	anion transmembrane transporter activity
IX91_20725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IX91_20730	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IX91_20730	COG1116	anion transmembrane transporter activity
IX91_20740	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IX91_20745	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IX91_20745	COG1648	precorrin-2 dehydrogenase activity
IX91_20750	COG0243	molybdopterin cofactor binding
IX91_20775	COG0277	FAD linked oxidase domain protein
IX91_20780	COG0583	DNA-binding transcription factor activity
IX91_20790	COG2315	Protein conserved in bacteria
IX91_20805	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_20815	COG1024	Enoyl-CoA hydratase
IX91_20820	COG1024	Enoyl-CoA hydratase
IX91_20825	COG1960	acyl-CoA dehydrogenase activity
IX91_20835	COG0183	Belongs to the thiolase family
IX91_20845	COG1960	acyl-CoA dehydrogenase activity
IX91_20850	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
IX91_20855	COG1024	Enoyl-CoA hydratase
IX91_20870	COG3706	GGDEF domain
IX91_20895	COG3706	GGDEF domain
IX91_20900	COG0840	transmembrane signaling receptor activity
IX91_20915	COG1115	amino acid carrier protein
IX91_20950	COG0840	transmembrane signaling receptor activity
IX91_20960	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX91_20975	COG0004	ammonium transporteR
IX91_20995	COG2759	Belongs to the formate--tetrahydrofolate ligase family
IX91_21005	COG2176	DNA-directed DNA polymerase activity
IX91_21010	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IX91_21015	COG1846	Transcriptional regulator
IX91_21020	COG3706	GGDEF domain
IX91_21040	COG2814	Major facilitator Superfamily
IX91_21045	COG2425	protein containing a von Willebrand factor type A (vWA) domain
IX91_21055	COG0494	nUDIX hydrolase
IX91_21060	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
IX91_21070	COG0737	Belongs to the 5'-nucleotidase family
IX91_21075	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IX91_21080	COG0835	chemotaxis
IX91_21080	COG0784	Response regulator, receiver
IX91_21085	COG3706	GGDEF domain
IX91_21105	COG1760	l-serine dehydratase
IX91_21110	COG0583	DNA-binding transcription factor activity
IX91_21115	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IX91_21120	COG2866	Carboxypeptidase
IX91_21150	COG3842	ATPase activity
IX91_21160	COG1840	ABC-type Fe3 transport system, periplasmic component
IX91_21200	COG1011	Hydrolase
IX91_21215	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
IX91_21220	COG1454	alcohol dehydrogenase
IX91_21230	COG3795	YCII-related domain
IX91_21235	COG4941	Belongs to the sigma-70 factor family
IX91_21260	COG3530	Putative quorum-sensing-regulated virulence factor
IX91_21280	COG1686	Belongs to the peptidase S11 family
IX91_21295	COG3036	rescue of stalled ribosome
IX91_21300	COG1278	Cold shock
IX91_21315	COG1017	nitric oxide dioxygenase activity
IX91_21315	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IX91_21320	COG3604	Transcriptional regulator
IX91_21335	COG0534	Mate efflux family protein
IX91_21345	COG0697	spore germination
IX91_21365	COG2814	Major facilitator Superfamily
IX91_21370	COG0583	DNA-binding transcription factor activity
IX91_21375	COG3300	MHYT domain
IX91_21375	COG5001	Diguanylate cyclase
IX91_21385	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IX91_21415	COG0366	Alpha amylase catalytic
IX91_21440	COG3706	GGDEF domain
IX91_21445	COG3217	Mosc domain protein beta barrel domain protein
IX91_21445	COG0633	Ferredoxin
IX91_21445	COG3217	Mosc domain protein beta barrel domain protein
IX91_21445	COG0633	Ferredoxin
IX91_21450	COG0401	homolog of Blt101
IX91_21460	COG3706	GGDEF domain
IX91_21465	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
IX91_21485	COG1733	regulation of RNA biosynthetic process
IX91_21495	COG0583	DNA-binding transcription factor activity
IX91_21520	COG0714	Associated with various cellular activities
IX91_21535	COG2304	oxidoreductase activity
IX91_21540	COG2304	oxidoreductase activity
IX91_21570	COG1765	OsmC-like protein
IX91_21575	COG0673	inositol 2-dehydrogenase activity
IX91_21595	COG0531	amino acid
IX91_21605	COG0121	glutamine amidotransferase
IX91_21630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IX91_21635	COG2239	Acts as a magnesium transporter
IX91_21640	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
IX91_21645	COG0402	S-adenosylhomocysteine deaminase activity
IX91_21655	COG0784	Response regulator, receiver
IX91_21655	COG5002	protein histidine kinase activity
IX91_21655	COG2205	protein histidine kinase activity
IX91_21700	COG0671	phosphoesterase, PA-phosphatase related
IX91_21720	COG0583	DNA-binding transcription factor activity
IX91_21810	COG1175	transmembrane transport
IX91_21820	COG3842	ATPase activity
IX91_21825	COG2169	Transcriptional regulator
IX91_21830	COG1486	melibiose metabolic process
IX91_21835	COG2211	Major facilitator Superfamily
IX91_21845	COG0330	HflC and HflK could
IX91_21855	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
IX91_21870	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
IX91_21880	COG0513	Belongs to the DEAD box helicase family
IX91_21885	COG0513	Belongs to the DEAD box helicase family
IX91_21895	COG1388	LysM domain
IX91_21895	COG1376	ErfK ybiS ycfS ynhG family protein
IX91_21900	COG0415	Belongs to the DNA photolyase family
IX91_21905	COG0789	Transcriptional regulator
IX91_21910	COG3272	Protein of unknown function (DUF1722)
IX91_21915	COG0813	purine-nucleoside phosphorylase activity
IX91_21930	COG3706	GGDEF domain
IX91_21940	COG1566	PFAM secretion protein HlyD family protein
IX91_21950	COG1122	ATPase activity
IX91_21975	COG0454	-acetyltransferase
IX91_21980	COG0840	transmembrane signaling receptor activity
IX91_22035	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IX91_22075	COG3033	Beta-eliminating lyase
IX91_22080	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
IX91_22085	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
IX91_22090	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IX91_22100	COG1999	signal sequence binding
IX91_22110	COG1162	GTPase activity
IX91_22115	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
IX91_22140	COG4221	oxidoreductase activity
IX91_22160	COG1477	protein flavinylation
IX91_22215	COG2894	cell division
IX91_22225	COG4964	Belongs to the GSP D family
IX91_22265	COG4176	ABC-type proline glycine betaine transport system permease component
IX91_22270	COG3448	diguanylate cyclase activity
IX91_22270	COG4175	Glycine betaine
IX91_22280	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IX91_22285	COG1126	abc transporter atp-binding protein
IX91_22290	COG0765	amino acid transport
IX91_22295	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_22300	COG0765	amino acid transport
IX91_22310	COG0109	protoheme IX farnesyltransferase activity
IX91_22315	COG1612	heme a metabolic process
IX91_22335	COG1845	cytochrome c oxidase, subunit III
IX91_22340	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
IX91_22345	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
IX91_22350	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IX91_22355	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IX91_22365	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IX91_22370	COG4232	protein-disulfide reductase activity
IX91_22385	COG1280	lysine exporter protein (LysE YggA)
IX91_22410	COG0179	Fumarylacetoacetate (FAA) hydrolase
IX91_22435	COG0583	DNA-binding transcription factor activity
IX91_22440	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IX91_22445	COG0700	Nucleoside recognition
IX91_22450	COG3366	ferrous iron transmembrane transporter activity
IX91_22455	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
IX91_22465	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IX91_22470	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
IX91_22480	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IX91_22500	COG4580	involved in the transport of maltose and maltodextrins
IX91_22510	COG3706	GGDEF domain
IX91_22515	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
IX91_22520	COG2814	Major facilitator Superfamily
IX91_22535	COG0583	DNA-binding transcription factor activity
IX91_22540	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
IX91_22545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IX91_22560	COG2329	Antibiotic biosynthesis monooxygenase
IX91_22570	COG3046	protein related to deoxyribodipyrimidine photolyase
IX91_22575	COG0415	Belongs to the DNA photolyase family
IX91_22605	COG3604	Transcriptional regulator
IX91_22615	COG0671	phosphoesterase, PA-phosphatase related
IX91_22620	COG1151	hydroxylamine reductase activity
IX91_22625	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IX91_22635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IX91_22640	COG4533	DNA binding
IX91_22675	COG0583	DNA-binding transcription factor activity
IX91_22690	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IX91_22715	COG0745	RESPONSE REGULATOR receiver
IX91_22720	COG0642	Histidine kinase
IX91_22730	COG2814	Major facilitator Superfamily
IX91_22735	COG3608	succinylglutamate desuccinylase aspartoacylase
IX91_22785	COG4533	DNA binding
IX91_22805	COG1247	-acetyltransferase
IX91_22825	COG0786	glutamate:sodium symporter activity
IX91_22845	COG1120	ATPase activity
IX91_22850	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IX91_22870	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IX91_22885	COG1132	(ABC) transporter
IX91_22900	COG1741	Belongs to the pirin family
IX91_22950	COG3710	Transcriptional regulator
IX91_22980	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
IX91_22985	COG1640	4-alpha-glucanotransferase
IX91_22990	COG0058	SHG alpha-glucan phosphorylase activity
IX91_22995	COG2909	trisaccharide binding
IX91_23020	COG1263	PTS System
IX91_23020	COG2190	(PTS) system
IX91_23020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IX91_23025	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IX91_23040	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IX91_23045	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IX91_23050	COG1454	alcohol dehydrogenase
IX91_23060	COG0561	phosphatase activity
IX91_23095	COG1012	belongs to the aldehyde dehydrogenase family
IX91_23100	COG1902	pentaerythritol trinitrate reductase activity
IX91_23105	COG2814	Major facilitator Superfamily
IX91_23110	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_23125	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IX91_23130	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
IX91_23140	COG0471	metal ion transport
IX91_23145	COG0596	Alpha beta hydrolase
IX91_23165	COG3788	relative of glutathione S-transferase, MAPEG superfamily
IX91_23170	COG1595	DNA-templated transcription, initiation
IX91_23185	COG0519	Catalyzes the synthesis of GMP from XMP
IX91_23185	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IX91_23190	COG0739	heme binding
IX91_23220	COG0583	DNA-binding transcription factor activity
IX91_23245	COG0671	phosphoesterase, PA-phosphatase related
IX91_23250	COG3706	GGDEF domain
IX91_23250	COG0745	RESPONSE REGULATOR receiver
IX91_23255	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
IX91_23260	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IX91_23265	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IX91_23270	COG1116	anion transmembrane transporter activity
IX91_23275	COG0351	phosphomethylpyrimidine kinase
IX91_23285	COG0583	DNA-binding transcription factor activity
IX91_23305	COG0768	penicillin binding
IX91_23345	COG1228	amidohydrolase
IX91_23360	COG4974	Belongs to the 'phage' integrase family
IX91_23375	COG0589	response to stress
IX91_23395	COG1574	metal-dependent hydrolase with the TIM-barrel fold
IX91_23425	COG1901	pseudouridine methyltransferase
IX91_23430	COG1929	Belongs to the glycerate kinase type-1 family
IX91_23435	COG2610	gluconate transmembrane transporter activity
IX91_23440	COG3835	regulator
IX91_23445	COG2084	Dehydrogenase
IX91_23450	COG3622	Belongs to the hyi family
IX91_23455	COG3960	tartronate-semialdehyde synthase activity
IX91_23460	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
IX91_23470	COG1846	Transcriptional regulator
IX91_23480	COG2135	peptidase activity
IX91_23495	COG0697	spore germination
IX91_23515	COG1342	Belongs to the UPF0251 family
IX91_23520	COG0215	cysteine-tRNA ligase activity
IX91_23530	COG0110	maltose O-acetyltransferase activity
IX91_23535	COG0583	DNA-binding transcription factor activity
IX91_23555	COG3623	hexulose-6-phosphate isomerase
IX91_23560	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
IX91_23565	COG0561	phosphatase activity
IX91_23570	COG0235	Class ii aldolase
IX91_23600	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_23605	COG0583	DNA-binding transcription factor activity
IX91_23635	COG0444	Belongs to the ABC transporter superfamily
IX91_23640	COG4608	Belongs to the ABC transporter superfamily
IX91_23660	COG1192	Involved in chromosome partitioning
IX91_23670	COG2814	Major facilitator Superfamily
IX91_23675	COG3033	Beta-eliminating lyase
IX91_23695	COG1028	Short-chain dehydrogenase reductase Sdr
IX91_23705	COG1902	pentaerythritol trinitrate reductase activity
IX91_23710	COG1881	PFAM PEBP family protein
IX91_23715	COG4166	transmembrane transport
IX91_23730	COG0814	amino acid
IX91_23795	COG1181	Belongs to the D-alanine--D-alanine ligase family
IX91_23815	COG1716	ATPase activity
IX91_23850	COG3501	Rhs element vgr protein
IX91_23885	COG3710	Transcriptional regulator
IX91_23905	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
IX91_23910	COG1012	belongs to the aldehyde dehydrogenase family
IX91_24025	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
IX91_24035	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IX91_24050	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IX91_24055	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IX91_24070	COG0372	Belongs to the citrate synthase family
IX91_24075	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
IX91_24095	COG4948	Mandelate Racemase Muconate Lactonizing
IX91_24135	COG0456	acetyltransferase
IX91_24150	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IX91_24180	COG4946	Tricorn protease homolog
IX91_24180	COG0793	Belongs to the peptidase S41A family
IX91_24245	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
IX91_24255	COG0612	Peptidase, M16
IX91_24265	COG3550	peptidyl-serine autophosphorylation
IX91_24270	COG2205	protein histidine kinase activity
IX91_24275	COG0745	RESPONSE REGULATOR receiver
IX91_24305	COG0840	transmembrane signaling receptor activity
IX91_24320	COG1132	(ABC) transporter
IX91_24325	COG1132	(ABC) transporter
IX91_24360	COG0745	RESPONSE REGULATOR receiver
IX91_24365	COG2205	protein histidine kinase activity
IX91_24370	COG4452	Inner membrane protein CreD
IX91_24385	COG0583	DNA-binding transcription factor activity
IX91_24445	COG4977	sequence-specific DNA binding
IX91_24445	COG1917	Cupin 2, conserved barrel domain protein
IX91_24460	COG2003	Belongs to the UPF0758 family
IX91_24520	COG1742	UPF0060 membrane protein
IX91_24585	COG1714	RDD family
IX91_24625	COG1309	transcriptional regulator
IX91_24645	COG0753	catalase activity
IX91_24660	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IX91_24670	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
IX91_24985	COG2201	protein-glutamate methylesterase activity
IX91_25345	COG3704	protein secretion by the type IV secretion system
IX91_25385	COG1525	nuclease
IX91_25430	COG0784	Response regulator, receiver
IX91_25430	COG2205	protein histidine kinase activity
IX91_25430	COG2198	Histidine kinase
IX91_25460	COG1192	Involved in chromosome partitioning
IX91_25465	COG1192	Involved in chromosome partitioning
IX91_25510	COG2003	Belongs to the UPF0758 family
IX91_25670	COG1396	sequence-specific DNA binding
IX91_25720	COG3692	DNA binding
IX91_25915	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IX91_26135	COG0484	heat shock protein binding