IX91_00010	SM00480	DNA polymerase III beta subunit
IX91_00020	SM00387	Histidine kinase-like ATPases
IX91_00020	SM00433	TopoisomeraseII
IX91_00080	SM00829	Enoylreductase
IX91_00110	SM00382	ATPases associated with a variety of cellular activities
IX91_00120	SM00563	Phosphate acyltransferases
IX91_00185	SM00257	Lysin motif
IX91_00210	SM01001	AIR carboxylase
IX91_00285	SM00052	Putative diguanylate phosphodiesterase
IX91_00285	SM00267	diguanylate cyclase
IX91_00285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_00290	SM00382	ATPases associated with a variety of cellular activities
IX91_00290	SM00448	cheY-homologous receiver domain
IX91_00295	SM00091	PAS domain
IX91_00295	SM00387	Histidine kinase-like ATPases
IX91_00295	SM00388	His Kinase A (phosphoacceptor) domain
IX91_00305	SM01230	IX91_00305
IX91_00355	SM00363	S4 RNA-binding domain
IX91_00370	SM00382	ATPases associated with a variety of cellular activities
IX91_00420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_00420	SM00387	Histidine kinase-like ATPases
IX91_00420	SM00388	His Kinase A (phosphoacceptor) domain
IX91_00425	SM00448	cheY-homologous receiver domain
IX91_00425	SM00862	Transcriptional regulatory protein, C terminal
IX91_00440	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_00440	SM00732	Likely ribonuclease with RNase H fold.
IX91_00475	SM00487	DEAD-like helicases superfamily
IX91_00475	SM00490	helicase superfamily c-terminal domain
IX91_00485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_00485	SM00954	Region found in RelA / SpoT proteins
IX91_00490	SM01409	IX91_00490
IX91_00495	SM00072	Guanylate kinase homologues.
IX91_00580	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
IX91_00580	SM01232	IX91_00580
IX91_00685	SM00984	UDP binding domain
IX91_00805	SM00155	Phospholipase D. Active site motifs.
IX91_00840	SM00883	Chaperonin 10 Kd subunit
IX91_00850	SM00986	Uracil DNA glycosylase superfamily
IX91_00850	SM00987	UreE urease accessory protein, C-terminal domain 
IX91_00870	SM00411	bacterial (prokaryotic) histone like domain
IX91_00880	SM01209	IX91_00880
IX91_00880	SM01210	IX91_00880
IX91_00885	SM00798	AICARFT/IMPCHase bienzyme
IX91_00885	SM00851	MGS-like domain
IX91_00890	SM00422	helix_turn_helix, mercury resistance
IX91_00895	SM00267	diguanylate cyclase
IX91_00915	SM00878	Biotin carboxylase C-terminal domain
IX91_00935	SM00479	IX91_00935
IX91_00940	SM00100	Cyclic nucleotide-monophosphate binding domain
IX91_00940	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_00950	SM00387	Histidine kinase-like ATPases
IX91_00950	SM00388	His Kinase A (phosphoacceptor) domain
IX91_00950	SM00448	cheY-homologous receiver domain
IX91_00975	SM00421	helix_turn_helix, Lux Regulon
IX91_00975	SM00448	cheY-homologous receiver domain
IX91_01085	SM01150	IX91_01085
IX91_01090	SM00100	Cyclic nucleotide-monophosphate binding domain
IX91_01090	SM00419	helix_turn_helix, cAMP Regulatory protein
IX91_01115	SM00382	ATPases associated with a variety of cellular activities
IX91_01145	SM00788	Adenylosuccinate synthetase
IX91_01150	SM00671	Sel1-like repeats.
IX91_01160	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_01160	SM00357	Cold shock protein domain
IX91_01160	SM00955	IX91_01160
IX91_01165	SM00967	RNA 2'-O ribose methyltransferase substrate binding
IX91_01170	SM01403	IX91_01170
IX91_01190	SM01382	IX91_01190
IX91_01190	SM01383	IX91_01190
IX91_01205	SM00322	K homology RNA-binding domain
IX91_01225	SM01374	IX91_01225
IX91_01230	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
IX91_01295	SM00363	S4 RNA-binding domain
IX91_01295	SM01390	IX91_01295
IX91_01300	SM00662	RNA polymerases D
IX91_01380	SM00387	Histidine kinase-like ATPases
IX91_01380	SM00388	His Kinase A (phosphoacceptor) domain
IX91_01380	SM00448	cheY-homologous receiver domain
IX91_01385	SM00448	cheY-homologous receiver domain
IX91_01385	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_01540	SM01018	B12 binding domain
IX91_01545	SM00924	MgtE intracellular N domain
IX91_01575	SM00382	ATPases associated with a variety of cellular activities
IX91_01595	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_01605	SM00382	ATPases associated with a variety of cellular activities
IX91_01640	SM00563	Phosphate acyltransferases
IX91_01645	SM00849	Metallo-beta-lactamase superfamily
IX91_01680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_01680	SM01049	IX91_01680
IX91_01720	SM00478	endonuclease III
IX91_01720	SM00525	IX91_01720
IX91_01735	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_01750	SM01152	IX91_01750
IX91_01790	SM00899	IX91_01790
IX91_01805	SM00732	Likely ribonuclease with RNase H fold.
IX91_01830	SM00731	SprT homologues.
IX91_01845	SM00861	Transketolase, pyrimidine binding domain
IX91_01855	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
IX91_01895	SM00267	diguanylate cyclase
IX91_01900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_01900	SM00895	IX91_01900
IX91_01910	SM00420	helix_turn_helix, Deoxyribose operon repressor
IX91_01910	SM01134	IX91_01910
IX91_01950	SM00563	Phosphate acyltransferases
IX91_02005	SM00650	Ribosomal RNA adenine dimethylases
IX91_02025	SM00271	DnaJ molecular chaperone homology domain
IX91_02085	SM00953	IX91_02085
IX91_02110	SM00400	zinc finger
IX91_02110	SM00493	IX91_02110
IX91_02110	SM00766	DNA primase DnaG DnaB-binding
IX91_02135	SM01207	IX91_02135
IX91_02140	SM00905	Dihydroneopterin aldolase
IX91_02185	SM00257	Lysin motif
IX91_02195	SM01091	Transporter associated domain
IX91_02205	SM00382	ATPases associated with a variety of cellular activities
IX91_02205	SM00962	SRP54-type protein, GTPase domain
IX91_02205	SM00963	SRP54-type protein, helical bundle domain
IX91_02275	SM00644	IX91_02275
IX91_02300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_02300	SM00895	IX91_02300
IX91_02330	SM00947	Carbonic anhydrase
IX91_02340	SM00382	ATPases associated with a variety of cellular activities
IX91_02385	SM00487	DEAD-like helicases superfamily
IX91_02385	SM00490	helicase superfamily c-terminal domain
IX91_02385	SM00847	Helicase associated domain (HA2)  Add an annotation
IX91_02415	SM00938	Nitrogen regulatory protein P-II
IX91_02435	SM00382	ATPases associated with a variety of cellular activities
IX91_02445	SM01068	Putative carbohydrate binding domain
IX91_02465	SM00382	ATPases associated with a variety of cellular activities
IX91_02470	SM00382	ATPases associated with a variety of cellular activities
IX91_02490	SM00091	PAS domain
IX91_02490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_02490	SM00387	Histidine kinase-like ATPases
IX91_02490	SM00388	His Kinase A (phosphoacceptor) domain
IX91_02490	SM00448	cheY-homologous receiver domain
IX91_02530	SM00363	S4 RNA-binding domain
IX91_02560	SM01103	IX91_02560
IX91_02570	SM00382	ATPases associated with a variety of cellular activities
IX91_02595	SM00052	Putative diguanylate phosphodiesterase
IX91_02595	SM00267	diguanylate cyclase
IX91_02605	SM00487	DEAD-like helicases superfamily
IX91_02605	SM00490	helicase superfamily c-terminal domain
IX91_02620	SM00937	IX91_02620
IX91_02630	SM00382	ATPases associated with a variety of cellular activities
IX91_02655	SM00927	DNA mismatch repair enzyme MutH
IX91_02665	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_02695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
IX91_02710	SM00904	Riboflavin kinase
IX91_02780	SM00448	cheY-homologous receiver domain
IX91_02780	SM00850	LytTr DNA-binding domain
IX91_02795	SM00830	Chorismate mutase type II
IX91_02810	SM00382	ATPases associated with a variety of cellular activities
IX91_02830	SM00052	Putative diguanylate phosphodiesterase
IX91_02830	SM00267	diguanylate cyclase
IX91_02840	SM00830	Chorismate mutase type II
IX91_02850	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_02860	SM00363	S4 RNA-binding domain
IX91_02870	SM00382	ATPases associated with a variety of cellular activities
IX91_02870	SM01086	C-terminal, D2-small domain, of ClpB protein
IX91_02910	SM00155	Phospholipase D. Active site motifs.
IX91_02945	SM00271	DnaJ molecular chaperone homology domain
IX91_02970	SM00562	IX91_02970
IX91_02975	SM00838	Elongation factor G C-terminus
IX91_02975	SM00889	Elongation factor G, domain IV
IX91_03000	SM00342	helix_turn_helix, arabinose operon control protein
IX91_03020	SM00382	ATPases associated with a variety of cellular activities
IX91_03025	SM00858	IX91_03025
IX91_03075	SM00028	Tetratricopeptide repeats
IX91_03090	SM00382	ATPases associated with a variety of cellular activities
IX91_03115	SM01038	Beta galactosidase small chain
IX91_03125	SM00342	helix_turn_helix, arabinose operon control protein
IX91_03160	SM01038	Beta galactosidase small chain
IX91_03165	SM00354	helix_turn _helix lactose operon repressor
IX91_03215	SM00354	helix_turn _helix lactose operon repressor
IX91_03240	SM00420	helix_turn_helix, Deoxyribose operon repressor
IX91_03240	SM01134	IX91_03240
IX91_03280	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_03295	SM01323	IX91_03295
IX91_03345	SM00448	cheY-homologous receiver domain
IX91_03345	SM00862	Transcriptional regulatory protein, C terminal
IX91_03350	SM00091	PAS domain
IX91_03350	SM00387	Histidine kinase-like ATPases
IX91_03350	SM00388	His Kinase A (phosphoacceptor) domain
IX91_03380	SM00382	ATPases associated with a variety of cellular activities
IX91_03425	SM00382	ATPases associated with a variety of cellular activities
IX91_03430	SM00382	ATPases associated with a variety of cellular activities
IX91_03435	SM00382	ATPases associated with a variety of cellular activities
IX91_03490	SM00925	MltA specific insert domain
IX91_03510	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_03530	SM00564	beta-propeller repeat
IX91_03535	SM00382	ATPases associated with a variety of cellular activities
IX91_03545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_03545	SM00267	diguanylate cyclase
IX91_03560	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_03560	SM01240	IX91_03560
IX91_03570	SM00495	Chitin-binding domain type 3
IX91_03615	SM01091	Transporter associated domain
IX91_03625	SM00849	Metallo-beta-lactamase superfamily
IX91_03630	SM00849	Metallo-beta-lactamase superfamily
IX91_03630	SM01027	Beta-Casp domain
IX91_03635	SM00563	Phosphate acyltransferases
IX91_03700	SM00387	Histidine kinase-like ATPases
IX91_03705	SM00421	helix_turn_helix, Lux Regulon
IX91_03705	SM00448	cheY-homologous receiver domain
IX91_03715	SM00671	Sel1-like repeats.
IX91_03750	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_03785	SM00382	ATPases associated with a variety of cellular activities
IX91_03820	SM00996	S-adenosyl-L-homocysteine hydrolase
IX91_03820	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
IX91_03890	SM00271	DnaJ molecular chaperone homology domain
IX91_03940	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_03945	SM01211	IX91_03945
IX91_03990	SM00363	S4 RNA-binding domain
IX91_03995	SM00463	Small MutS-related domain
IX91_04020	SM01081	Putative carbohydrate binding domain
IX91_04135	SM00861	Transketolase, pyrimidine binding domain
IX91_04150	SM00881	CoA binding domain
IX91_04195	SM00861	Transketolase, pyrimidine binding domain
IX91_04220	SM00981	IX91_04220
IX91_04245	SM00477	DNA/RNA non-specific endonuclease
IX91_04245	SM00892	DNA/RNA non-specific endonuclease
IX91_04250	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
IX91_04250	SM00475	5'-3' exonuclease
IX91_04260	SM00267	diguanylate cyclase
IX91_04265	SM00028	Tetratricopeptide repeats
IX91_04415	SM00382	ATPases associated with a variety of cellular activities
IX91_04420	SM00091	PAS domain
IX91_04420	SM00387	Histidine kinase-like ATPases
IX91_04420	SM00388	His Kinase A (phosphoacceptor) domain
IX91_04425	SM00382	ATPases associated with a variety of cellular activities
IX91_04425	SM00448	cheY-homologous receiver domain
IX91_04450	SM00382	ATPases associated with a variety of cellular activities
IX91_04505	SM00463	Small MutS-related domain
IX91_04565	SM00825	Beta-ketoacyl synthase
IX91_04575	SM00859	Semialdehyde dehydrogenase, NAD binding domain
IX91_04620	SM00382	ATPases associated with a variety of cellular activities
IX91_04630	SM00342	helix_turn_helix, arabinose operon control protein
IX91_04640	SM00899	IX91_04640
IX91_04660	SM00836	DALR anticodon binding domain
IX91_04660	SM01016	Arginyl tRNA synthetase N terminal dom
IX91_04685	SM00855	Phosphoglycerate mutase family
IX91_04695	SM00382	ATPases associated with a variety of cellular activities
IX91_04695	SM00962	SRP54-type protein, GTPase domain
IX91_04710	SM00448	cheY-homologous receiver domain
IX91_04720	SM00073	Histidine Phosphotransfer domain
IX91_04720	SM00260	Two component signalling adaptor domain
IX91_04720	SM00387	Histidine kinase-like ATPases
IX91_04720	SM01231	IX91_04720
IX91_04725	SM00448	cheY-homologous receiver domain
IX91_04735	SM00260	Two component signalling adaptor domain
IX91_04740	SM00260	Two component signalling adaptor domain
IX91_04750	SM00382	ATPases associated with a variety of cellular activities
IX91_04840	SM00448	cheY-homologous receiver domain
IX91_04860	SM00382	ATPases associated with a variety of cellular activities
IX91_04870	SM00493	IX91_04870
IX91_04910	SM00382	ATPases associated with a variety of cellular activities
IX91_04915	SM00382	ATPases associated with a variety of cellular activities
IX91_04915	SM01086	C-terminal, D2-small domain, of ClpB protein
IX91_04950	SM00220	Serine/Threonine protein kinases, catalytic domain
IX91_04985	SM00344	helix_turn_helix ASNC type
IX91_05005	SM00240	Forkhead associated domain
IX91_05165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_05165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_05180	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
IX91_05220	SM00840	IX91_05220
IX91_05230	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_05260	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
IX91_05260	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
IX91_05260	SM00493	IX91_05260
IX91_05265	SM00267	diguanylate cyclase
IX91_05300	SM00354	helix_turn _helix lactose operon repressor
IX91_05310	SM00448	cheY-homologous receiver domain
IX91_05310	SM00862	Transcriptional regulatory protein, C terminal
IX91_05340	SM00342	helix_turn_helix, arabinose operon control protein
IX91_05400	SM00357	Cold shock protein domain
IX91_05410	SM00382	ATPases associated with a variety of cellular activities
IX91_05410	SM01086	C-terminal, D2-small domain, of ClpB protein
IX91_05490	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_05500	SM00849	Metallo-beta-lactamase superfamily
IX91_05515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_05520	SM00278	Helix-hairpin-helix DNA-binding motif class 1
IX91_05525	SM00382	ATPases associated with a variety of cellular activities
IX91_05580	SM00028	Tetratricopeptide repeats
IX91_05600	SM00387	Histidine kinase-like ATPases
IX91_05600	SM00388	His Kinase A (phosphoacceptor) domain
IX91_05600	SM00448	cheY-homologous receiver domain
IX91_05645	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_05655	SM00487	DEAD-like helicases superfamily
IX91_05700	SM00342	helix_turn_helix, arabinose operon control protein
IX91_05720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_05720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_05740	SM00387	Histidine kinase-like ATPases
IX91_05740	SM00388	His Kinase A (phosphoacceptor) domain
IX91_05745	SM00448	cheY-homologous receiver domain
IX91_05745	SM00862	Transcriptional regulatory protein, C terminal
IX91_05785	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_05785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_05790	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
IX91_05810	SM00491	IX91_05810
IX91_05830	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_05830	SM00876	Biotin and Thiamin Synthesis associated domain
IX91_05930	SM00528	Domain in histone-like proteins of HNS family
IX91_05985	SM01131	IX91_05985
IX91_06000	SM00382	ATPases associated with a variety of cellular activities
IX91_06005	SM00382	ATPases associated with a variety of cellular activities
IX91_06025	SM00382	ATPases associated with a variety of cellular activities
IX91_06080	SM00155	Phospholipase D. Active site motifs.
IX91_06090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_06090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_06150	SM00028	Tetratricopeptide repeats
IX91_06165	SM00327	von Willebrand factor (vWF) type A domain
IX91_06180	SM00382	ATPases associated with a variety of cellular activities
IX91_06215	SM00052	Putative diguanylate phosphodiesterase
IX91_06215	SM00448	cheY-homologous receiver domain
IX91_06245	SM00387	Histidine kinase-like ATPases
IX91_06250	SM00387	Histidine kinase-like ATPases
IX91_06250	SM00388	His Kinase A (phosphoacceptor) domain
IX91_06250	SM00448	cheY-homologous receiver domain
IX91_06260	SM00411	bacterial (prokaryotic) histone like domain
IX91_06270	SM00841	Elongation factor P, C-terminal
IX91_06270	SM01185	IX91_06270
IX91_06280	SM00486	DNA polymerase type-B family
IX91_06285	SM00421	helix_turn_helix, Lux Regulon
IX91_06285	SM00448	cheY-homologous receiver domain
IX91_06290	SM00278	Helix-hairpin-helix DNA-binding motif class 1
IX91_06290	SM00465	GIY-YIG type nucleases (URI domain)
IX91_06320	SM00267	diguanylate cyclase
IX91_06350	SM00112	Cadherin repeats.
IX91_06350	SM00327	von Willebrand factor (vWF) type A domain
IX91_06350	SM00948	Proteasome subunit A N-terminal signature  Add an annotation
IX91_06355	SM00267	diguanylate cyclase
IX91_06375	SM00873	B3/4 domain
IX91_06375	SM00874	tRNA synthetase B5 domain
IX91_06375	SM00896	Ferredoxin-fold anticodon binding domain
IX91_06405	SM00382	ATPases associated with a variety of cellular activities
IX91_06430	SM01133	IX91_06430
IX91_06450	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
IX91_06450	SM00776	IX91_06450
IX91_06460	SM00346	helix_turn_helix isocitrate lyase regulation
IX91_06480	SM00354	helix_turn _helix lactose operon repressor
IX91_06485	SM00640	Glycosyl hydrolases family 32
IX91_06495	SM00354	helix_turn _helix lactose operon repressor
IX91_06590	SM00422	helix_turn_helix, mercury resistance
IX91_06600	SM01022	IX91_06600
IX91_06625	SM00871	Bacterial transcription activator, effector binding domain
IX91_06630	SM00886	Stress responsive A/B Barrel Domain
IX91_06720	SM00052	Putative diguanylate phosphodiesterase
IX91_06720	SM00267	diguanylate cyclase
IX91_06750	SM00267	diguanylate cyclase
IX91_06760	SM00271	DnaJ molecular chaperone homology domain
IX91_06760	SM00671	Sel1-like repeats.
IX91_06790	SM00020	Trypsin-like serine protease
IX91_06815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_06815	SM00866	IX91_06815
IX91_06845	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_06865	SM00479	IX91_06865
IX91_06895	SM00903	Flavin reductase like domain
IX91_06915	SM00855	Phosphoglycerate mutase family
IX91_06935	SM00382	ATPases associated with a variety of cellular activities
IX91_06945	SM00267	diguanylate cyclase
IX91_06965	SM00382	ATPases associated with a variety of cellular activities
IX91_07000	SM00028	Tetratricopeptide repeats
IX91_07030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
IX91_07030	SM00091	PAS domain
IX91_07030	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_07035	SM00422	helix_turn_helix, mercury resistance
IX91_07090	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_07140	SM00382	ATPases associated with a variety of cellular activities
IX91_07140	SM01086	C-terminal, D2-small domain, of ClpB protein
IX91_07210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_07210	SM00895	IX91_07210
IX91_07250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_07250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_07270	SM00028	Tetratricopeptide repeats
IX91_07270	SM00267	diguanylate cyclase
IX91_07290	SM00327	von Willebrand factor (vWF) type A domain
IX91_07295	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
IX91_07300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_07320	SM00382	ATPases associated with a variety of cellular activities
IX91_07335	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_07365	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_07385	SM00382	ATPases associated with a variety of cellular activities
IX91_07395	SM00945	ProQ/FINO family
IX91_07400	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
IX91_07400	SM00245	tail specific protease
IX91_07435	SM00981	IX91_07435
IX91_07445	SM00382	ATPases associated with a variety of cellular activities
IX91_07570	SM00100	Cyclic nucleotide-monophosphate binding domain
IX91_07570	SM00419	helix_turn_helix, cAMP Regulatory protein
IX91_07610	SM00382	ATPases associated with a variety of cellular activities
IX91_07635	SM00267	diguanylate cyclase
IX91_07665	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
IX91_07700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_07700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_07885	SM00382	ATPases associated with a variety of cellular activities
IX91_07895	SM00387	Histidine kinase-like ATPases
IX91_07895	SM00388	His Kinase A (phosphoacceptor) domain
IX91_07900	SM00382	ATPases associated with a variety of cellular activities
IX91_07900	SM00448	cheY-homologous receiver domain
IX91_07915	SM00382	ATPases associated with a variety of cellular activities
IX91_07925	SM00852	Probable molybdopterin binding domain
IX91_07940	SM01144	IX91_07940
IX91_07950	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_08015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_08015	SM00387	Histidine kinase-like ATPases
IX91_08015	SM00388	His Kinase A (phosphoacceptor) domain
IX91_08015	SM00448	cheY-homologous receiver domain
IX91_08020	SM00382	ATPases associated with a variety of cellular activities
IX91_08020	SM00448	cheY-homologous receiver domain
IX91_08095	SM00387	Histidine kinase-like ATPases
IX91_08095	SM00388	His Kinase A (phosphoacceptor) domain
IX91_08100	SM00448	cheY-homologous receiver domain
IX91_08100	SM00862	Transcriptional regulatory protein, C terminal
IX91_08120	SM00862	Transcriptional regulatory protein, C terminal
IX91_08140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_08140	SM00387	Histidine kinase-like ATPases
IX91_08140	SM00388	His Kinase A (phosphoacceptor) domain
IX91_08145	SM00448	cheY-homologous receiver domain
IX91_08145	SM00862	Transcriptional regulatory protein, C terminal
IX91_08155	SM00470	ParB-like nuclease domain
IX91_08210	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_08220	SM00267	diguanylate cyclase
IX91_08240	SM00448	cheY-homologous receiver domain
IX91_08245	SM00091	PAS domain
IX91_08245	SM00387	Histidine kinase-like ATPases
IX91_08290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_08290	SM00387	Histidine kinase-like ATPases
IX91_08290	SM00388	His Kinase A (phosphoacceptor) domain
IX91_08295	SM00448	cheY-homologous receiver domain
IX91_08295	SM00862	Transcriptional regulatory protein, C terminal
IX91_08300	SM00849	Metallo-beta-lactamase superfamily
IX91_08335	SM00849	Metallo-beta-lactamase superfamily
IX91_08360	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_08360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_08370	SM00434	DNA Topoisomerase IV
IX91_08400	SM00852	Probable molybdopterin binding domain
IX91_08430	SM00112	Cadherin repeats.
IX91_08460	SM00382	ATPases associated with a variety of cellular activities
IX91_08485	SM00363	S4 RNA-binding domain
IX91_08490	SM00487	DEAD-like helicases superfamily
IX91_08490	SM00490	helicase superfamily c-terminal domain
IX91_08500	SM00448	cheY-homologous receiver domain
IX91_08500	SM00862	Transcriptional regulatory protein, C terminal
IX91_08505	SM00387	Histidine kinase-like ATPases
IX91_08520	SM00862	Transcriptional regulatory protein, C terminal
IX91_08540	SM00862	Transcriptional regulatory protein, C terminal
IX91_08580	SM00833	Cobalamin synthesis protein cobW C-terminal domain
IX91_08585	SM00052	Putative diguanylate phosphodiesterase
IX91_08620	SM00382	ATPases associated with a variety of cellular activities
IX91_08645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_08645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_08660	SM01266	IX91_08660
IX91_08670	SM00387	Histidine kinase-like ATPases
IX91_08670	SM00388	His Kinase A (phosphoacceptor) domain
IX91_08670	SM00448	cheY-homologous receiver domain
IX91_08710	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
IX91_08720	SM00421	helix_turn_helix, Lux Regulon
IX91_08720	SM00448	cheY-homologous receiver domain
IX91_08725	SM00387	Histidine kinase-like ATPases
IX91_08725	SM01049	IX91_08725
IX91_08755	SM00849	Metallo-beta-lactamase superfamily
IX91_08800	SM00267	diguanylate cyclase
IX91_08820	SM00091	PAS domain
IX91_08820	SM00382	ATPases associated with a variety of cellular activities
IX91_08855	SM00387	Histidine kinase-like ATPases
IX91_08855	SM00388	His Kinase A (phosphoacceptor) domain
IX91_08855	SM00448	cheY-homologous receiver domain
IX91_08880	SM00052	Putative diguanylate phosphodiesterase
IX91_08910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_08910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_08925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_08935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_08955	SM00487	DEAD-like helicases superfamily
IX91_08955	SM00490	helicase superfamily c-terminal domain
IX91_08960	SM00919	Malic enzyme, NAD binding domain
IX91_08960	SM01274	IX91_08960
IX91_08975	SM00267	diguanylate cyclase
IX91_09000	SM00382	ATPases associated with a variety of cellular activities
IX91_09005	SM00382	ATPases associated with a variety of cellular activities
IX91_09010	SM00363	S4 RNA-binding domain
IX91_09020	SM00481	DNA polymerase alpha chain like domain
IX91_09070	SM00382	ATPases associated with a variety of cellular activities
IX91_09080	SM00382	ATPases associated with a variety of cellular activities
IX91_09080	SM00487	DEAD-like helicases superfamily
IX91_09080	SM00490	helicase superfamily c-terminal domain
IX91_09080	SM00847	Helicase associated domain (HA2)  Add an annotation
IX91_09110	SM00479	IX91_09110
IX91_09115	SM00267	diguanylate cyclase
IX91_09115	SM01079	IX91_09115
IX91_09205	SM00382	ATPases associated with a variety of cellular activities
IX91_09325	SM00342	helix_turn_helix, arabinose operon control protein
IX91_09345	SM00450	Rhodanese Homology Domain
IX91_09410	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_09445	SM00052	Putative diguanylate phosphodiesterase
IX91_09445	SM00091	PAS domain
IX91_09450	SM00052	Putative diguanylate phosphodiesterase
IX91_09450	SM00091	PAS domain
IX91_09455	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_09470	SM00387	Histidine kinase-like ATPases
IX91_09475	SM00448	cheY-homologous receiver domain
IX91_09540	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_09540	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
IX91_09545	SM00382	ATPases associated with a variety of cellular activities
IX91_09565	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_09565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_09585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_09585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_09595	SM00763	PrkA AAA domain
IX91_09625	SM00382	ATPases associated with a variety of cellular activities
IX91_09630	SM00849	Metallo-beta-lactamase superfamily
IX91_09660	SM00382	ATPases associated with a variety of cellular activities
IX91_09675	SM00487	DEAD-like helicases superfamily
IX91_09675	SM00490	helicase superfamily c-terminal domain
IX91_09675	SM00982	IX91_09675
IX91_09675	SM01058	CarD-like/TRCF domain
IX91_09725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_09725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_09735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_09755	SM00843	IX91_09755
IX91_09760	SM00344	helix_turn_helix ASNC type
IX91_09765	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
IX91_09765	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
IX91_09785	SM00267	diguanylate cyclase
IX91_09795	SM00382	ATPases associated with a variety of cellular activities
IX91_09800	SM00382	ATPases associated with a variety of cellular activities
IX91_09840	SM00382	ATPases associated with a variety of cellular activities
IX91_09910	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_09910	SM00267	diguanylate cyclase
IX91_09940	SM00344	helix_turn_helix ASNC type
IX91_09955	SM00978	IX91_09955
IX91_09965	SM00563	Phosphate acyltransferases
IX91_09995	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
IX91_10025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_10045	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_10055	SM01144	IX91_10055
IX91_10065	SM00487	DEAD-like helicases superfamily
IX91_10065	SM00490	helicase superfamily c-terminal domain
IX91_10070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_10070	SM00866	IX91_10070
IX91_10075	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
IX91_10115	SM00481	DNA polymerase alpha chain like domain
IX91_10120	SM00260	Two component signalling adaptor domain
IX91_10120	SM00448	cheY-homologous receiver domain
IX91_10195	SM00825	Beta-ketoacyl synthase
IX91_10205	SM00822	IX91_10205
IX91_10210	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
IX91_10240	SM00363	S4 RNA-binding domain
IX91_10245	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_10255	SM00474	3'-5' exonuclease
IX91_10285	SM00487	DEAD-like helicases superfamily
IX91_10285	SM00491	IX91_10285
IX91_10325	SM00870	IX91_10325
IX91_10330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_10365	SM00382	ATPases associated with a variety of cellular activities
IX91_10390	SM00267	diguanylate cyclase
IX91_10395	SM00382	ATPases associated with a variety of cellular activities
IX91_10430	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
IX91_10435	SM00028	Tetratricopeptide repeats
IX91_10445	SM00411	bacterial (prokaryotic) histone like domain
IX91_10455	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_10475	SM00411	bacterial (prokaryotic) histone like domain
IX91_10480	SM00382	ATPases associated with a variety of cellular activities
IX91_10480	SM00464	Found in ATP-dependent protease La (LON)
IX91_10485	SM00382	ATPases associated with a variety of cellular activities
IX91_10485	SM00994	ClpX C4-type zinc finger
IX91_10485	SM01086	C-terminal, D2-small domain, of ClpB protein
IX91_10500	SM00387	Histidine kinase-like ATPases
IX91_10500	SM00388	His Kinase A (phosphoacceptor) domain
IX91_10505	SM00382	ATPases associated with a variety of cellular activities
IX91_10505	SM00448	cheY-homologous receiver domain
IX91_10525	SM00382	ATPases associated with a variety of cellular activities
IX91_10545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_10545	SM00387	Histidine kinase-like ATPases
IX91_10550	SM00448	cheY-homologous receiver domain
IX91_10550	SM00862	Transcriptional regulatory protein, C terminal
IX91_10560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_10625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_10625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_10650	SM00859	Semialdehyde dehydrogenase, NAD binding domain
IX91_10665	SM00073	Histidine Phosphotransfer domain
IX91_10715	SM00354	helix_turn _helix lactose operon repressor
IX91_10740	SM00382	ATPases associated with a variety of cellular activities
IX91_10745	SM00354	helix_turn _helix lactose operon repressor
IX91_10760	SM00342	helix_turn_helix, arabinose operon control protein
IX91_10770	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
IX91_10770	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
IX91_10770	SM00493	IX91_10770
IX91_10795	SM00226	Low molecular weight phosphatase family
IX91_10855	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_10865	SM00267	diguanylate cyclase
IX91_10885	SM00852	Probable molybdopterin binding domain
IX91_10890	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_10905	SM00382	ATPases associated with a variety of cellular activities
IX91_10905	SM00448	cheY-homologous receiver domain
IX91_10910	SM00487	DEAD-like helicases superfamily
IX91_10910	SM00490	helicase superfamily c-terminal domain
IX91_10965	SM00900	IX91_10965
IX91_10975	SM00478	endonuclease III
IX91_10975	SM00525	IX91_10975
IX91_10995	SM00479	IX91_10995
IX91_11010	SM01130	IX91_11010
IX91_11025	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_11025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_11060	SM00900	IX91_11060
IX91_11070	SM00710	Parallel beta-helix repeats
IX91_11070	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
IX91_11075	SM00382	ATPases associated with a variety of cellular activities
IX91_11130	SM00937	IX91_11130
IX91_11150	SM01400	IX91_11150
IX91_11290	SM00047	Lysozyme subfamily 2
IX91_11335	SM00138	Methyltransferase, chemotaxis proteins 
IX91_11340	SM00260	Two component signalling adaptor domain
IX91_11340	SM00448	cheY-homologous receiver domain
IX91_11345	SM00858	IX91_11345
IX91_11425	SM00862	Transcriptional regulatory protein, C terminal
IX91_11445	SM00387	Histidine kinase-like ATPases
IX91_11450	SM00862	Transcriptional regulatory protein, C terminal
IX91_11475	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_11480	SM00938	Nitrogen regulatory protein P-II
IX91_11510	SM00244	prohibitin homologues
IX91_11535	SM00278	Helix-hairpin-helix DNA-binding motif class 1
IX91_11535	SM00292	breast cancer carboxy-terminal domain
IX91_11535	SM00532	Ligase N family
IX91_11540	SM00771	ZipA, C-terminal domain (FtsZ-binding)
IX91_11575	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_11590	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_11590	SM01091	Transporter associated domain
IX91_11645	SM00936	Penicillin-binding protein 5, C-terminal domain 
IX91_11660	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_11710	SM00642	Alpha-amylase domain
IX91_11720	SM00354	helix_turn _helix lactose operon repressor
IX91_11735	SM00382	ATPases associated with a variety of cellular activities
IX91_11735	SM00930	IX91_11735
IX91_11750	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_11800	SM00479	IX91_11800
IX91_11815	SM00849	Metallo-beta-lactamase superfamily
IX91_11820	SM00257	Lysin motif
IX91_11835	SM00938	Nitrogen regulatory protein P-II
IX91_11845	SM00977	TilS substrate C-terminal domain
IX91_11855	SM00481	DNA polymerase alpha chain like domain
IX91_11885	SM00935	Outer membrane protein (OmpH-like)
IX91_11895	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
IX91_11940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_11995	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
IX91_12050	SM00267	diguanylate cyclase
IX91_12065	SM00487	DEAD-like helicases superfamily
IX91_12065	SM00490	helicase superfamily c-terminal domain
IX91_12075	SM00267	diguanylate cyclase
IX91_12075	SM00448	cheY-homologous receiver domain
IX91_12105	SM00900	IX91_12105
IX91_12155	SM00464	Found in ATP-dependent protease La (LON)
IX91_12180	SM00382	ATPases associated with a variety of cellular activities
IX91_12210	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
IX91_12215	SM01133	IX91_12215
IX91_12265	SM00986	Uracil DNA glycosylase superfamily
IX91_12265	SM00987	UreE urease accessory protein, C-terminal domain 
IX91_12290	SM00851	MGS-like domain
IX91_12290	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
IX91_12295	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
IX91_12315	SM00957	SecA DEAD-like domain
IX91_12315	SM00958	SecA preprotein cross-linking domain
IX91_12330	SM00864	Tubulin/FtsZ family, GTPase domain
IX91_12330	SM00865	Tubulin/FtsZ family, C-terminal domain
IX91_12335	SM00842	Cell division protein FtsA
IX91_12415	SM00749	bacterial OsmY and nodulation domain
IX91_12470	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
IX91_12475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
IX91_12480	SM00434	DNA Topoisomerase IV
IX91_12485	SM00387	Histidine kinase-like ATPases
IX91_12485	SM00433	TopoisomeraseII
IX91_12520	SM00073	Histidine Phosphotransfer domain
IX91_12520	SM00091	PAS domain
IX91_12520	SM00387	Histidine kinase-like ATPases
IX91_12520	SM00388	His Kinase A (phosphoacceptor) domain
IX91_12520	SM00448	cheY-homologous receiver domain
IX91_12525	SM00091	PAS domain
IX91_12525	SM00267	diguanylate cyclase
IX91_12530	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_12580	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_12620	SM00052	Putative diguanylate phosphodiesterase
IX91_12620	SM00091	PAS domain
IX91_12620	SM00267	diguanylate cyclase
IX91_12640	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_12645	SM00028	Tetratricopeptide repeats
IX91_12650	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_12650	SM00322	K homology RNA-binding domain
IX91_12655	SM01387	IX91_12655
IX91_12715	SM00448	cheY-homologous receiver domain
IX91_12715	SM00862	Transcriptional regulatory protein, C terminal
IX91_12730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_12730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_12740	SM00880	IX91_12740
IX91_12740	SM01118	IX91_12740
IX91_12755	SM00287	Bacterial SH3 domain homologues
IX91_12765	SM00382	ATPases associated with a variety of cellular activities
IX91_12775	SM01192	IX91_12775
IX91_12775	SM01193	IX91_12775
IX91_12790	SM00954	Region found in RelA / SpoT proteins
IX91_12800	SM00073	Histidine Phosphotransfer domain
IX91_12800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_12800	SM00387	Histidine kinase-like ATPases
IX91_12800	SM00388	His Kinase A (phosphoacceptor) domain
IX91_12800	SM00448	cheY-homologous receiver domain
IX91_12825	SM00358	Double-stranded RNA binding motif
IX91_12825	SM00535	Ribonuclease III family
IX91_12835	SM00838	Elongation factor G C-terminus
IX91_12955	SM00014	Acid phosphatase homologues
IX91_12960	SM00917	LeuA allosteric (dimerisation) domain
IX91_12965	SM01329	IX91_12965
IX91_13035	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_13135	SM00829	Enoylreductase
IX91_13205	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
IX91_13215	SM00382	ATPases associated with a variety of cellular activities
IX91_13225	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
IX91_13225	SM00534	ATPase domain of DNA mismatch repair MUTS family
IX91_13280	SM00487	DEAD-like helicases superfamily
IX91_13280	SM00490	helicase superfamily c-terminal domain
IX91_13285	SM00670	Large family of predicted nucleotide-binding domains
IX91_13380	SM00316	Ribosomal protein S1-like RNA-binding domain
IX91_13450	SM00382	ATPases associated with a variety of cellular activities
IX91_13455	SM00028	Tetratricopeptide repeats
IX91_13460	SM00382	ATPases associated with a variety of cellular activities
IX91_13465	SM00965	Secretin and TonB N terminus short domain
IX91_13485	SM00052	Putative diguanylate phosphodiesterase
IX91_13485	SM00267	diguanylate cyclase
IX91_13495	SM00421	helix_turn_helix, Lux Regulon
IX91_13535	SM00382	ATPases associated with a variety of cellular activities
IX91_13590	SM00448	cheY-homologous receiver domain
IX91_13595	SM00387	Histidine kinase-like ATPases
IX91_13620	SM00382	ATPases associated with a variety of cellular activities
IX91_13685	SM01005	Alanine racemase, C-terminal domain
IX91_13745	SM00838	Elongation factor G C-terminus
IX91_13745	SM00889	Elongation factor G, domain IV
IX91_13785	SM00320	WD40 repeats
IX91_13800	SM00244	prohibitin homologues
IX91_13805	SM00244	prohibitin homologues
IX91_13825	SM00853	MutL C terminal dimerisation domain
IX91_13825	SM01340	IX91_13825
IX91_13830	SM00257	Lysin motif
IX91_13830	SM00646	IX91_13830
IX91_13905	SM00479	IX91_13905
IX91_13925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_13925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_13970	SM00663	RNA polymerase I subunit A N-terminus
IX91_13995	SM00649	Ribosomal protein L11/L12
IX91_14000	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
IX91_14000	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
IX91_14070	SM00841	Elongation factor P, C-terminal
IX91_14070	SM01185	IX91_14070
IX91_14110	SM00448	cheY-homologous receiver domain
IX91_14110	SM00862	Transcriptional regulatory protein, C terminal
IX91_14115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_14115	SM00387	Histidine kinase-like ATPases
IX91_14115	SM00388	His Kinase A (phosphoacceptor) domain
IX91_14165	SM00965	Secretin and TonB N terminus short domain
IX91_14235	SM00859	Semialdehyde dehydrogenase, NAD binding domain
IX91_14255	SM00971	Serine acetyltransferase, N-terminal
IX91_14270	SM00450	Rhodanese Homology Domain
IX91_14345	SM00382	ATPases associated with a variety of cellular activities
IX91_14345	SM01086	C-terminal, D2-small domain, of ClpB protein
IX91_14360	SM00354	helix_turn _helix lactose operon repressor
IX91_14365	SM00487	DEAD-like helicases superfamily
IX91_14365	SM00490	helicase superfamily c-terminal domain
IX91_14375	SM00919	Malic enzyme, NAD binding domain
IX91_14375	SM01274	IX91_14375
IX91_14460	SM00360	RNA recognition motif
IX91_14505	SM00829	Enoylreductase
IX91_14530	SM00563	Phosphate acyltransferases
IX91_14555	SM00450	Rhodanese Homology Domain
IX91_14570	SM00382	ATPases associated with a variety of cellular activities
IX91_14575	SM00382	ATPases associated with a variety of cellular activities
IX91_14575	SM00962	SRP54-type protein, GTPase domain
IX91_14575	SM00963	SRP54-type protein, helical bundle domain
IX91_14630	SM00404	Protein tyrosine phosphatase, catalytic domain motif
IX91_14635	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
IX91_14640	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
IX91_14645	SM00052	Putative diguanylate phosphodiesterase
IX91_14675	SM01144	IX91_14675
IX91_14680	SM00052	Putative diguanylate phosphodiesterase
IX91_14680	SM00267	diguanylate cyclase
IX91_14680	SM00897	FIST N domain
IX91_14680	SM01204	IX91_14680
IX91_14715	SM01219	IX91_14715
IX91_14835	SM00357	Cold shock protein domain
IX91_14835	SM00382	ATPases associated with a variety of cellular activities
IX91_14835	SM00959	Rho termination factor, N-terminal domain
IX91_14845	SM00487	DEAD-like helicases superfamily
IX91_14845	SM00490	helicase superfamily c-terminal domain
IX91_14865	SM00341	Helicase and RNase D C-terminal
IX91_14865	SM00487	DEAD-like helicases superfamily
IX91_14865	SM00490	helicase superfamily c-terminal domain
IX91_14865	SM00956	IX91_14865
IX91_14875	SM00342	helix_turn_helix, arabinose operon control protein
IX91_14945	SM00448	cheY-homologous receiver domain
IX91_14975	SM00382	ATPases associated with a variety of cellular activities
IX91_15050	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_15080	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
IX91_15080	SM00474	3'-5' exonuclease
IX91_15080	SM00475	5'-3' exonuclease
IX91_15080	SM00482	DNA polymerase A domain
IX91_15090	SM01004	Delta-aminolevulinic acid dehydratase
IX91_15145	SM00342	helix_turn_helix, arabinose operon control protein
IX91_15190	SM00052	Putative diguanylate phosphodiesterase
IX91_15190	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
IX91_15190	SM00091	PAS domain
IX91_15190	SM00267	diguanylate cyclase
IX91_15195	SM00344	helix_turn_helix ASNC type
IX91_15220	SM00876	Biotin and Thiamin Synthesis associated domain
IX91_15345	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_15365	SM00382	ATPases associated with a variety of cellular activities
IX91_15405	SM00470	ParB-like nuclease domain
IX91_15420	SM01228	IX91_15420
IX91_15450	SM00382	ATPases associated with a variety of cellular activities
IX91_15460	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_15460	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
IX91_15475	SM00470	ParB-like nuclease domain
IX91_15490	SM00448	cheY-homologous receiver domain
IX91_15495	SM00073	Histidine Phosphotransfer domain
IX91_15495	SM00260	Two component signalling adaptor domain
IX91_15495	SM00387	Histidine kinase-like ATPases
IX91_15495	SM01231	IX91_15495
IX91_15500	SM00260	Two component signalling adaptor domain
IX91_15505	SM00260	Two component signalling adaptor domain
IX91_15510	SM00091	PAS domain
IX91_15510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_15510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_15515	SM00138	Methyltransferase, chemotaxis proteins 
IX91_15525	SM00448	cheY-homologous receiver domain
IX91_15530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_15540	SM00331	Sigma factor PP2C-like phosphatases
IX91_15540	SM00448	cheY-homologous receiver domain
IX91_15555	SM00479	IX91_15555
IX91_15575	SM00857	Resolvase, N terminal domain
IX91_15610	SM00563	Phosphate acyltransferases
IX91_15615	SM00267	diguanylate cyclase
IX91_15625	SM00495	Chitin-binding domain type 3
IX91_15660	SM00354	helix_turn _helix lactose operon repressor
IX91_15670	SM00342	helix_turn_helix, arabinose operon control protein
IX91_15675	SM00344	helix_turn_helix ASNC type
IX91_15695	SM00245	tail specific protease
IX91_15700	SM00342	helix_turn_helix, arabinose operon control protein
IX91_15790	SM00849	Metallo-beta-lactamase superfamily
IX91_15810	SM00342	helix_turn_helix, arabinose operon control protein
IX91_15810	SM00871	Bacterial transcription activator, effector binding domain
IX91_15815	SM00342	helix_turn_helix, arabinose operon control protein
IX91_15840	SM00382	ATPases associated with a variety of cellular activities
IX91_15860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_15865	SM00382	ATPases associated with a variety of cellular activities
IX91_15880	SM01119	IX91_15880
IX91_15930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_15940	SM00387	Histidine kinase-like ATPases
IX91_15940	SM00388	His Kinase A (phosphoacceptor) domain
IX91_15945	SM00382	ATPases associated with a variety of cellular activities
IX91_15945	SM00448	cheY-homologous receiver domain
IX91_15960	SM00382	ATPases associated with a variety of cellular activities
IX91_16025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_16060	SM00823	Phosphopantetheine attachment site
IX91_16065	SM00822	IX91_16065
IX91_16065	SM00823	Phosphopantetheine attachment site
IX91_16065	SM00825	Beta-ketoacyl synthase
IX91_16065	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
IX91_16070	SM00823	Phosphopantetheine attachment site
IX91_16150	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_16155	SM01034	Sensors of blue-light using FAD
IX91_16160	SM00849	Metallo-beta-lactamase superfamily
IX91_16165	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_16170	SM00382	ATPases associated with a variety of cellular activities
IX91_16180	SM00450	Rhodanese Homology Domain
IX91_16205	SM00872	Alpha mannosidase, middle domain
IX91_16210	SM00642	Alpha-amylase domain
IX91_16275	SM00354	helix_turn _helix lactose operon repressor
IX91_16305	SM01266	IX91_16305
IX91_16395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_16395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_16425	SM00382	ATPases associated with a variety of cellular activities
IX91_16430	SM00382	ATPases associated with a variety of cellular activities
IX91_16455	SM00988	UreE urease accessory protein, N-terminal domain
IX91_16485	SM00387	Histidine kinase-like ATPases
IX91_16485	SM00388	His Kinase A (phosphoacceptor) domain
IX91_16485	SM00448	cheY-homologous receiver domain
IX91_16490	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_16490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_16495	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_16510	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
IX91_16515	SM01092	CO dehydrogenase flavoprotein C-terminal domain
IX91_16520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_16520	SM00895	IX91_16520
IX91_16545	SM00342	helix_turn_helix, arabinose operon control protein
IX91_16570	SM00357	Cold shock protein domain
IX91_16580	SM00495	Chitin-binding domain type 3
IX91_16585	SM00825	Beta-ketoacyl synthase
IX91_16590	SM00822	IX91_16590
IX91_16600	SM00825	Beta-ketoacyl synthase
IX91_16660	SM00563	Phosphate acyltransferases
IX91_16695	SM00052	Putative diguanylate phosphodiesterase
IX91_16715	SM00155	Phospholipase D. Active site motifs.
IX91_16760	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
IX91_16860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_16860	SM00895	IX91_16860
IX91_16875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_16875	SM00866	IX91_16875
IX91_16920	SM00382	ATPases associated with a variety of cellular activities
IX91_16925	SM00382	ATPases associated with a variety of cellular activities
IX91_16950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_16950	SM00895	IX91_16950
IX91_16960	SM00267	diguanylate cyclase
IX91_16975	SM00387	Histidine kinase-like ATPases
IX91_16980	SM00448	cheY-homologous receiver domain
IX91_16980	SM00862	Transcriptional regulatory protein, C terminal
IX91_17010	SM01130	IX91_17010
IX91_17015	SM00342	helix_turn_helix, arabinose operon control protein
IX91_17025	SM00052	Putative diguanylate phosphodiesterase
IX91_17025	SM00267	diguanylate cyclase
IX91_17025	SM01049	IX91_17025
IX91_17070	SM00387	Histidine kinase-like ATPases
IX91_17070	SM01049	IX91_17070
IX91_17075	SM00421	helix_turn_helix, Lux Regulon
IX91_17075	SM00448	cheY-homologous receiver domain
IX91_17085	SM00882	Coenzyme A transferase
IX91_17090	SM00822	IX91_17090
IX91_17105	SM00422	helix_turn_helix, mercury resistance
IX91_17125	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
IX91_17140	SM00382	ATPases associated with a variety of cellular activities
IX91_17145	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_17145	SM00267	diguanylate cyclase
IX91_17150	SM00342	helix_turn_helix, arabinose operon control protein
IX91_17200	SM00028	Tetratricopeptide repeats
IX91_17200	SM00267	diguanylate cyclase
IX91_17220	SM00422	helix_turn_helix, mercury resistance
IX91_17245	SM00448	cheY-homologous receiver domain
IX91_17250	SM00091	PAS domain
IX91_17250	SM00387	Histidine kinase-like ATPases
IX91_17255	SM00448	cheY-homologous receiver domain
IX91_17290	SM00257	Lysin motif
IX91_17305	SM00635	Bacterial Ig-like domain 2
IX91_17310	SM00642	Alpha-amylase domain
IX91_17350	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_17360	SM00267	diguanylate cyclase
IX91_17380	SM00267	diguanylate cyclase
IX91_17380	SM01079	IX91_17380
IX91_17410	SM01350	IX91_17410
IX91_17415	SM00354	helix_turn _helix lactose operon repressor
IX91_17530	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_17550	SM00387	Histidine kinase-like ATPases
IX91_17560	SM00422	helix_turn_helix, mercury resistance
IX91_17590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_17610	SM00862	Transcriptional regulatory protein, C terminal
IX91_17640	SM00507	HNH nucleases
IX91_17680	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_17690	SM00020	Trypsin-like serine protease
IX91_17700	SM00421	helix_turn_helix, Lux Regulon
IX91_17705	SM00387	Histidine kinase-like ATPases
IX91_17720	SM00382	ATPases associated with a variety of cellular activities
IX91_17740	SM00354	helix_turn _helix lactose operon repressor
IX91_17745	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_17750	SM00387	Histidine kinase-like ATPases
IX91_17760	SM00260	Two component signalling adaptor domain
IX91_17760	SM00448	cheY-homologous receiver domain
IX91_17765	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_17775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_17775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_17795	SM00382	ATPases associated with a variety of cellular activities
IX91_17805	SM00267	diguanylate cyclase
IX91_17860	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_17865	SM00382	ATPases associated with a variety of cellular activities
IX91_17895	SM00729	Elongator protein 3, MiaB family, Radical SAM
IX91_17920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_17935	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_17960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_17980	SM00331	Sigma factor PP2C-like phosphatases
IX91_17985	SM00073	Histidine Phosphotransfer domain
IX91_17985	SM00091	PAS domain
IX91_17985	SM00387	Histidine kinase-like ATPases
IX91_17985	SM00388	His Kinase A (phosphoacceptor) domain
IX91_17985	SM00448	cheY-homologous receiver domain
IX91_17990	SM00448	cheY-homologous receiver domain
IX91_17990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_17995	SM00448	cheY-homologous receiver domain
IX91_18010	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
IX91_18115	SM00052	Putative diguanylate phosphodiesterase
IX91_18115	SM00267	diguanylate cyclase
IX91_18115	SM01079	IX91_18115
IX91_18175	SM00382	ATPases associated with a variety of cellular activities
IX91_18195	SM00387	Histidine kinase-like ATPases
IX91_18200	SM00448	cheY-homologous receiver domain
IX91_18200	SM00850	LytTr DNA-binding domain
IX91_18215	SM00387	Histidine kinase-like ATPases
IX91_18215	SM00388	His Kinase A (phosphoacceptor) domain
IX91_18220	SM00448	cheY-homologous receiver domain
IX91_18220	SM00862	Transcriptional regulatory protein, C terminal
IX91_18250	SM00642	Alpha-amylase domain
IX91_18265	SM00642	Alpha-amylase domain
IX91_18270	SM00642	Alpha-amylase domain
IX91_18285	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
IX91_18305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_18305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_18310	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_18330	SM00422	helix_turn_helix, mercury resistance
IX91_18420	SM00267	diguanylate cyclase
IX91_18480	SM00448	cheY-homologous receiver domain
IX91_18480	SM00862	Transcriptional regulatory protein, C terminal
IX91_18485	SM00387	Histidine kinase-like ATPases
IX91_18490	SM00052	Putative diguanylate phosphodiesterase
IX91_18490	SM00267	diguanylate cyclase
IX91_18490	SM01049	IX91_18490
IX91_18530	SM00642	Alpha-amylase domain
IX91_18560	SM00829	Enoylreductase
IX91_18570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_18570	SM00267	diguanylate cyclase
IX91_18575	SM01022	IX91_18575
IX91_18580	SM00487	DEAD-like helicases superfamily
IX91_18580	SM00490	helicase superfamily c-terminal domain
IX91_18625	SM00344	helix_turn_helix ASNC type
IX91_18635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_18635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_18640	SM01240	IX91_18640
IX91_18690	SM00838	Elongation factor G C-terminus
IX91_18690	SM00889	Elongation factor G, domain IV
IX91_18700	SM00382	ATPases associated with a variety of cellular activities
IX91_18715	SM00382	ATPases associated with a variety of cellular activities
IX91_18720	SM00923	MbtH-like protein
IX91_18725	SM00823	Phosphopantetheine attachment site
IX91_18725	SM01294	IX91_18725
IX91_18730	SM00823	Phosphopantetheine attachment site
IX91_18730	SM00824	Thioesterase
IX91_18740	SM01006	Siderophore biosynthesis protein domain
IX91_18755	SM00448	cheY-homologous receiver domain
IX91_18760	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
IX91_18760	SM00091	PAS domain
IX91_18760	SM00387	Histidine kinase-like ATPases
IX91_18760	SM00388	His Kinase A (phosphoacceptor) domain
IX91_18760	SM00448	cheY-homologous receiver domain
IX91_18790	SM00382	ATPases associated with a variety of cellular activities
IX91_18800	SM00387	Histidine kinase-like ATPases
IX91_18800	SM00388	His Kinase A (phosphoacceptor) domain
IX91_18805	SM00448	cheY-homologous receiver domain
IX91_18805	SM00862	Transcriptional regulatory protein, C terminal
IX91_18845	SM00382	ATPases associated with a variety of cellular activities
IX91_18890	SM00984	UDP binding domain
IX91_18910	SM00829	Enoylreductase
IX91_18945	SM00226	Low molecular weight phosphatase family
IX91_18975	SM00382	ATPases associated with a variety of cellular activities
IX91_19000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_19000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_19000	SM01049	IX91_19000
IX91_19015	SM00344	helix_turn_helix ASNC type
IX91_19020	SM00861	Transketolase, pyrimidine binding domain
IX91_19125	SM00450	Rhodanese Homology Domain
IX91_19130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_19130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_19130	SM01358	IX91_19130
IX91_19140	SM00852	Probable molybdopterin binding domain
IX91_19150	SM00487	DEAD-like helicases superfamily
IX91_19150	SM00490	helicase superfamily c-terminal domain
IX91_19185	SM00487	DEAD-like helicases superfamily
IX91_19185	SM00490	helicase superfamily c-terminal domain
IX91_19225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_19255	SM00851	MGS-like domain
IX91_19265	SM00073	Histidine Phosphotransfer domain
IX91_19265	SM00387	Histidine kinase-like ATPases
IX91_19265	SM00388	His Kinase A (phosphoacceptor) domain
IX91_19265	SM00448	cheY-homologous receiver domain
IX91_19285	SM00342	helix_turn_helix, arabinose operon control protein
IX91_19290	SM00495	Chitin-binding domain type 3
IX91_19290	SM00636	IX91_19290
IX91_19300	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
IX91_19300	SM00267	diguanylate cyclase
IX91_19320	SM00354	helix_turn _helix lactose operon repressor
IX91_19350	SM00382	ATPases associated with a variety of cellular activities
IX91_19360	SM00267	diguanylate cyclase
IX91_19360	SM00448	cheY-homologous receiver domain
IX91_19365	SM00267	diguanylate cyclase
IX91_19380	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
IX91_19380	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
IX91_19390	SM00387	Histidine kinase-like ATPases
IX91_19390	SM00388	His Kinase A (phosphoacceptor) domain
IX91_19395	SM00448	cheY-homologous receiver domain
IX91_19395	SM00862	Transcriptional regulatory protein, C terminal
IX91_19430	SM00220	Serine/Threonine protein kinases, catalytic domain
IX91_19615	SM00881	CoA binding domain
IX91_19620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
IX91_19630	SM00052	Putative diguanylate phosphodiesterase
IX91_19670	SM01057	Eukaryotic-type carbonic anhydrase
IX91_19680	SM00829	Enoylreductase
IX91_19705	SM00481	DNA polymerase alpha chain like domain
IX91_19710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_19725	SM01350	IX91_19725
IX91_19775	SM00782	PhnA Zinc-Ribbon
IX91_19780	SM00642	Alpha-amylase domain
IX91_19835	SM00867	YceI-like domain 
IX91_19860	SM00052	Putative diguanylate phosphodiesterase
IX91_19870	SM00421	helix_turn_helix, Lux Regulon
IX91_19870	SM00448	cheY-homologous receiver domain
IX91_19875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_19875	SM00387	Histidine kinase-like ATPases
IX91_19890	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
IX91_19915	SM00091	PAS domain
IX91_19915	SM00267	diguanylate cyclase
IX91_19925	SM00796	Allophanate hydrolase subunit 1
IX91_19930	SM00797	Allophanate hydrolase subunit 2
IX91_19945	SM00382	ATPases associated with a variety of cellular activities
IX91_19960	SM00052	Putative diguanylate phosphodiesterase
IX91_19960	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_19960	SM00267	diguanylate cyclase
IX91_19980	SM00382	ATPases associated with a variety of cellular activities
IX91_19990	SM00271	DnaJ molecular chaperone homology domain
IX91_20040	SM00387	Histidine kinase-like ATPases
IX91_20040	SM00388	His Kinase A (phosphoacceptor) domain
IX91_20040	SM00448	cheY-homologous receiver domain
IX91_20080	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_20155	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
IX91_20165	SM00450	Rhodanese Homology Domain
IX91_20185	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
IX91_20190	SM00999	Aerolysin toxin
IX91_20225	SM00822	IX91_20225
IX91_20465	SM00052	Putative diguanylate phosphodiesterase
IX91_20465	SM00267	diguanylate cyclase
IX91_20475	SM00342	helix_turn_helix, arabinose operon control protein
IX91_20485	SM00422	helix_turn_helix, mercury resistance
IX91_20490	SM00382	ATPases associated with a variety of cellular activities
IX91_20515	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_20520	SM00421	helix_turn_helix, Lux Regulon
IX91_20520	SM00448	cheY-homologous receiver domain
IX91_20530	SM00052	Putative diguanylate phosphodiesterase
IX91_20530	SM00091	PAS domain
IX91_20530	SM00267	diguanylate cyclase
IX91_20540	SM00382	ATPases associated with a variety of cellular activities
IX91_20560	SM00091	PAS domain
IX91_20560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_20565	SM00267	diguanylate cyclase
IX91_20580	SM00487	DEAD-like helicases superfamily
IX91_20585	SM00901	IX91_20585
IX91_20600	SM00857	Resolvase, N terminal domain
IX91_20630	SM00833	Cobalamin synthesis protein cobW C-terminal domain
IX91_20650	SM00387	Histidine kinase-like ATPases
IX91_20650	SM00448	cheY-homologous receiver domain
IX91_20720	SM00382	ATPases associated with a variety of cellular activities
IX91_20735	SM01012	IX91_20735
IX91_20750	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
IX91_20800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_20800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_20805	SM00822	IX91_20805
IX91_20840	SM00422	helix_turn_helix, mercury resistance
IX91_20865	SM00448	cheY-homologous receiver domain
IX91_20870	SM00267	diguanylate cyclase
IX91_20895	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_20895	SM00267	diguanylate cyclase
IX91_20900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_20900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_20925	SM00861	Transketolase, pyrimidine binding domain
IX91_20935	SM00893	Electron transfer flavoprotein domain
IX91_20940	SM00893	Electron transfer flavoprotein domain
IX91_20950	SM00091	PAS domain
IX91_20950	SM01049	IX91_20950
IX91_20970	SM00990	IX91_20970
IX91_20975	SM00267	diguanylate cyclase
IX91_21000	SM00100	Cyclic nucleotide-monophosphate binding domain
IX91_21000	SM00116	Domain in cystathionine beta-synthase and other proteins.
IX91_21005	SM00479	IX91_21005
IX91_21015	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_21020	SM00267	diguanylate cyclase
IX91_21025	SM00344	helix_turn_helix ASNC type
IX91_21050	SM00382	ATPases associated with a variety of cellular activities
IX91_21080	SM00260	Two component signalling adaptor domain
IX91_21080	SM00448	cheY-homologous receiver domain
IX91_21085	SM00267	diguanylate cyclase
IX91_21120	SM00631	IX91_21120
IX91_21140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_21140	SM00866	IX91_21140
IX91_21150	SM00382	ATPases associated with a variety of cellular activities
IX91_21280	SM00936	Penicillin-binding protein 5, C-terminal domain 
IX91_21300	SM00357	Cold shock protein domain
IX91_21305	SM01322	IX91_21305
IX91_21320	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_21320	SM00382	ATPases associated with a variety of cellular activities
IX91_21375	SM00052	Putative diguanylate phosphodiesterase
IX91_21375	SM00267	diguanylate cyclase
IX91_21410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_21410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_21415	SM00642	Alpha-amylase domain
IX91_21430	SM00342	helix_turn_helix, arabinose operon control protein
IX91_21440	SM00091	PAS domain
IX91_21440	SM00267	diguanylate cyclase
IX91_21460	SM00267	diguanylate cyclase
IX91_21515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_21515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_21535	SM00327	von Willebrand factor (vWF) type A domain
IX91_21540	SM00028	Tetratricopeptide repeats
IX91_21555	SM00267	diguanylate cyclase
IX91_21590	SM00344	helix_turn_helix ASNC type
IX91_21600	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_21610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_21620	SM00342	helix_turn_helix, arabinose operon control protein
IX91_21635	SM00924	MgtE intracellular N domain
IX91_21655	SM00387	Histidine kinase-like ATPases
IX91_21655	SM00388	His Kinase A (phosphoacceptor) domain
IX91_21655	SM00448	cheY-homologous receiver domain
IX91_21670	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
IX91_21695	SM00014	Acid phosphatase homologues
IX91_21700	SM00014	Acid phosphatase homologues
IX91_21750	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_21820	SM00382	ATPases associated with a variety of cellular activities
IX91_21825	SM00342	helix_turn_helix, arabinose operon control protein
IX91_21845	SM00244	prohibitin homologues
IX91_21870	SM00357	Cold shock protein domain
IX91_21870	SM00955	IX91_21870
IX91_21880	SM00487	DEAD-like helicases superfamily
IX91_21880	SM00490	helicase superfamily c-terminal domain
IX91_21885	SM00487	DEAD-like helicases superfamily
IX91_21885	SM00490	helicase superfamily c-terminal domain
IX91_21895	SM00257	Lysin motif
IX91_21905	SM00422	helix_turn_helix, mercury resistance
IX91_21930	SM00267	diguanylate cyclase
IX91_21950	SM00382	ATPases associated with a variety of cellular activities
IX91_21980	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_22000	SM00344	helix_turn_helix ASNC type
IX91_22025	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22040	SM00421	helix_turn_helix, Lux Regulon
IX91_22060	SM00052	Putative diguanylate phosphodiesterase
IX91_22060	SM00267	diguanylate cyclase
IX91_22065	SM00382	ATPases associated with a variety of cellular activities
IX91_22070	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
IX91_22070	SM00495	Chitin-binding domain type 3
IX91_22070	SM00636	IX91_22070
IX91_22085	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_22120	SM00671	Sel1-like repeats.
IX91_22195	SM00028	Tetratricopeptide repeats
IX91_22210	SM00382	ATPases associated with a variety of cellular activities
IX91_22270	SM00382	ATPases associated with a variety of cellular activities
IX91_22285	SM00382	ATPases associated with a variety of cellular activities
IX91_22295	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_22295	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
IX91_22390	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22425	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22425	SM00871	Bacterial transcription activator, effector binding domain
IX91_22430	SM00849	Metallo-beta-lactamase superfamily
IX91_22470	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22470	SM01009	AlkA N-terminal domain
IX91_22505	SM00642	Alpha-amylase domain
IX91_22510	SM00267	diguanylate cyclase
IX91_22525	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22545	SM00062	Bacterial periplasmic substrate-binding proteins
IX91_22595	SM00450	Rhodanese Homology Domain
IX91_22600	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22605	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_22605	SM00382	ATPases associated with a variety of cellular activities
IX91_22615	SM00014	Acid phosphatase homologues
IX91_22635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_22685	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22715	SM00448	cheY-homologous receiver domain
IX91_22715	SM00862	Transcriptional regulatory protein, C terminal
IX91_22720	SM00388	His Kinase A (phosphoacceptor) domain
IX91_22740	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_22795	SM00191	Integrin alpha (beta-propellor repeats).
IX91_22810	SM00587	ZnF_C4 abd HLH domain containing kinases domain
IX91_22845	SM00382	ATPases associated with a variety of cellular activities
IX91_22860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
IX91_22860	SM00895	IX91_22860
IX91_22875	SM00100	Cyclic nucleotide-monophosphate binding domain
IX91_22885	SM00382	ATPases associated with a variety of cellular activities
IX91_22890	SM00342	helix_turn_helix, arabinose operon control protein
IX91_22950	SM00862	Transcriptional regulatory protein, C terminal
IX91_22980	SM00642	Alpha-amylase domain
IX91_22995	SM00421	helix_turn_helix, Lux Regulon
IX91_23005	SM00342	helix_turn_helix, arabinose operon control protein
IX91_23035	SM00861	Transketolase, pyrimidine binding domain
IX91_23065	SM00420	helix_turn_helix, Deoxyribose operon repressor
IX91_23065	SM01134	IX91_23065
IX91_23090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_23090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_23090	SM01049	IX91_23090
IX91_23120	SM00342	helix_turn_helix, arabinose operon control protein
IX91_23175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
IX91_23235	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_23245	SM00014	Acid phosphatase homologues
IX91_23250	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_23250	SM00267	diguanylate cyclase
IX91_23270	SM00382	ATPases associated with a variety of cellular activities
IX91_23340	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_23470	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_23500	SM00347	helix_turn_helix multiple antibiotic resistance protein
IX91_23530	SM01266	IX91_23530
IX91_23560	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
IX91_23570	SM01007	Class II Aldolase and Adducin N-terminal domain
IX91_23585	SM00420	helix_turn_helix, Deoxyribose operon repressor
IX91_23585	SM01134	IX91_23585
IX91_23595	SM00364	Leucine-rich repeats, bacterial type
IX91_23595	SM00369	Leucine-rich repeats, typical (most populated) subfamily
IX91_23600	SM00822	IX91_23600
IX91_23635	SM00382	ATPases associated with a variety of cellular activities
IX91_23640	SM00382	ATPases associated with a variety of cellular activities
IX91_23680	SM00862	Transcriptional regulatory protein, C terminal
IX91_23685	SM00862	Transcriptional regulatory protein, C terminal
IX91_23790	SM00382	ATPases associated with a variety of cellular activities
IX91_23790	SM01086	C-terminal, D2-small domain, of ClpB protein
IX91_23815	SM00240	Forkhead associated domain
IX91_23840	SM00220	Serine/Threonine protein kinases, catalytic domain
IX91_23865	SM00342	helix_turn_helix, arabinose operon control protein
IX91_23875	SM00862	Transcriptional regulatory protein, C terminal
IX91_23885	SM00862	Transcriptional regulatory protein, C terminal
IX91_23890	SM00052	Putative diguanylate phosphodiesterase
IX91_23895	SM00862	Transcriptional regulatory protein, C terminal
IX91_23925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
IX91_23945	SM00028	Tetratricopeptide repeats
IX91_24010	SM00862	Transcriptional regulatory protein, C terminal
IX91_24040	SM00829	Enoylreductase
IX91_24095	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
IX91_24120	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
IX91_24125	SM00220	Serine/Threonine protein kinases, catalytic domain
IX91_24180	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
IX91_24180	SM00245	tail specific protease
IX91_24260	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_24270	SM00387	Histidine kinase-like ATPases
IX91_24275	SM00448	cheY-homologous receiver domain
IX91_24275	SM00862	Transcriptional regulatory protein, C terminal
IX91_24305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
IX91_24305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
IX91_24320	SM00382	ATPases associated with a variety of cellular activities
IX91_24360	SM00448	cheY-homologous receiver domain
IX91_24360	SM00862	Transcriptional regulatory protein, C terminal
IX91_24365	SM00387	Histidine kinase-like ATPases
IX91_24365	SM00388	His Kinase A (phosphoacceptor) domain
IX91_24400	SM00862	Transcriptional regulatory protein, C terminal
IX91_24410	SM00862	Transcriptional regulatory protein, C terminal
IX91_24440	SM00382	ATPases associated with a variety of cellular activities
IX91_24445	SM00342	helix_turn_helix, arabinose operon control protein
IX91_24485	SM00357	Cold shock protein domain
IX91_24530	SM00191	Integrin alpha (beta-propellor repeats).
IX91_24640	SM00248	ankyrin repeats
IX91_24645	SM01060	IX91_24645
IX91_24655	SM00867	YceI-like domain 
IX91_24730	SM00470	ParB-like nuclease domain
IX91_24985	SM00448	cheY-homologous receiver domain
IX91_25075	SM00327	von Willebrand factor (vWF) type A domain
IX91_25215	SM00950	IX91_25215
IX91_25290	SM00857	Resolvase, N terminal domain
IX91_25385	SM00318	Staphylococcal nuclease homologues
IX91_25430	SM00387	Histidine kinase-like ATPases
IX91_25430	SM00448	cheY-homologous receiver domain
IX91_25445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
IX91_25470	SM00470	ParB-like nuclease domain
IX91_25670	SM00530	Helix-turn-helix XRE-family like proteins 
IX91_25885	SM00020	Trypsin-like serine protease
IX91_26135	SM00271	DnaJ molecular chaperone homology domain
