VV93_v1c00010 SM00382 ATPases associated with a variety of cellular activities VV93_v1c00010 SM00760 Bacterial dnaA protein helix-turn-helix domain VV93_v1c00020 SM00480 DNA polymerase III beta subunit VV93_v1c00040 SM00387 Histidine kinase-like ATPases VV93_v1c00040 SM00433 TopoisomeraseII VV93_v1c00060 SM00052 Putative diguanylate phosphodiesterase VV93_v1c00060 SM00267 diguanylate cyclase VV93_v1c00060 SM01079 VV93_v1c00060 VV93_v1c00160 SM00829 Enoylreductase VV93_v1c00380 SM00382 ATPases associated with a variety of cellular activities VV93_v1c00480 SM00220 Serine/Threonine protein kinases, catalytic domain VV93_v1c00500 SM00448 cheY-homologous receiver domain VV93_v1c00510 SM00354 helix_turn _helix lactose operon repressor VV93_v1c00610 SM00344 helix_turn_helix ASNC type VV93_v1c00620 SM00052 Putative diguanylate phosphodiesterase VV93_v1c00620 SM00091 PAS domain VV93_v1c00620 SM00267 diguanylate cyclase VV93_v1c00700 SM00028 Tetratricopeptide repeats VV93_v1c00750 SM01219 VV93_v1c00750 VV93_v1c00810 SM00052 Putative diguanylate phosphodiesterase VV93_v1c00810 SM00267 diguanylate cyclase VV93_v1c00810 SM00897 FIST N domain VV93_v1c00810 SM01204 VV93_v1c00810 VV93_v1c00820 SM01144 VV93_v1c00820 VV93_v1c00880 SM00052 Putative diguanylate phosphodiesterase VV93_v1c00890 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV93_v1c00900 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV93_v1c00910 SM00404 Protein tyrosine phosphatase, catalytic domain motif VV93_v1c01010 SM00382 ATPases associated with a variety of cellular activities VV93_v1c01010 SM00962 SRP54-type protein, GTPase domain VV93_v1c01010 SM00963 SRP54-type protein, helical bundle domain VV93_v1c01020 SM00382 ATPases associated with a variety of cellular activities VV93_v1c01050 SM00450 Rhodanese Homology Domain VV93_v1c01100 SM00563 Phosphate acyltransferases VV93_v1c01220 SM00422 helix_turn_helix, mercury resistance VV93_v1c01310 SM00387 Histidine kinase-like ATPases VV93_v1c01310 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c01310 SM00448 cheY-homologous receiver domain VV93_v1c01320 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c01410 SM00849 Metallo-beta-lactamase superfamily VV93_v1c01470 SM00635 Bacterial Ig-like domain 2 VV93_v1c01510 SM00974 VV93_v1c01510 VV93_v1c01570 SM00360 RNA recognition motif VV93_v1c01720 SM01004 Delta-aminolevulinic acid dehydratase VV93_v1c01730 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VV93_v1c01730 SM00474 3'-5' exonuclease VV93_v1c01730 SM00475 5'-3' exonuclease VV93_v1c01730 SM00482 DNA polymerase A domain VV93_v1c01790 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c01800 SM00052 Putative diguanylate phosphodiesterase VV93_v1c01800 SM00267 diguanylate cyclase VV93_v1c01800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c01810 SM00382 ATPases associated with a variety of cellular activities VV93_v1c01810 SM00448 cheY-homologous receiver domain VV93_v1c01820 SM00091 PAS domain VV93_v1c01820 SM00387 Histidine kinase-like ATPases VV93_v1c01820 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c01840 SM01230 VV93_v1c01840 VV93_v1c01940 SM00363 S4 RNA-binding domain VV93_v1c01970 SM00382 ATPases associated with a variety of cellular activities VV93_v1c02130 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c02130 SM00732 Likely ribonuclease with RNase H fold. VV93_v1c02150 SM00448 cheY-homologous receiver domain VV93_v1c02150 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c02160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c02160 SM00387 Histidine kinase-like ATPases VV93_v1c02160 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c02180 SM00487 DEAD-like helicases superfamily VV93_v1c02180 SM00490 helicase superfamily c-terminal domain VV93_v1c02200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c02200 SM00954 Region found in RelA / SpoT proteins VV93_v1c02210 SM01409 VV93_v1c02210 VV93_v1c02220 SM00072 Guanylate kinase homologues. VV93_v1c02230 SM00028 Tetratricopeptide repeats VV93_v1c02330 SM00382 ATPases associated with a variety of cellular activities VV93_v1c02340 SM00382 ATPases associated with a variety of cellular activities VV93_v1c02760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c02760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c02760 SM01049 VV93_v1c02760 VV93_v1c02810 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VV93_v1c02810 SM01232 VV93_v1c02810 VV93_v1c03040 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c03220 SM00226 Low molecular weight phosphatase family VV93_v1c03240 SM00984 UDP binding domain VV93_v1c03390 SM00984 UDP binding domain VV93_v1c03420 SM00849 Metallo-beta-lactamase superfamily VV93_v1c03420 SM01027 Beta-Casp domain VV93_v1c03440 SM01276 VV93_v1c03440 VV93_v1c03450 SM01403 VV93_v1c03450 VV93_v1c03490 SM01382 VV93_v1c03490 VV93_v1c03490 SM01383 VV93_v1c03490 VV93_v1c03520 SM00322 K homology RNA-binding domain VV93_v1c03560 SM01374 VV93_v1c03560 VV93_v1c03570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VV93_v1c03700 SM00363 S4 RNA-binding domain VV93_v1c03700 SM01390 VV93_v1c03700 VV93_v1c03710 SM00662 RNA polymerases D VV93_v1c03890 SM00382 ATPases associated with a variety of cellular activities VV93_v1c04050 SM00382 ATPases associated with a variety of cellular activities VV93_v1c04110 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c04110 SM00924 MgtE intracellular N domain VV93_v1c04170 SM00382 ATPases associated with a variety of cellular activities VV93_v1c04210 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c04230 SM00382 ATPases associated with a variety of cellular activities VV93_v1c04300 SM00563 Phosphate acyltransferases VV93_v1c04450 SM00650 Ribosomal RNA adenine dimethylases VV93_v1c04490 SM00271 DnaJ molecular chaperone homology domain VV93_v1c04540 SM01329 VV93_v1c04540 VV93_v1c04550 SM00917 LeuA allosteric (dimerisation) domain VV93_v1c04570 SM00014 Acid phosphatase homologues VV93_v1c04630 SM00091 PAS domain VV93_v1c04630 SM00267 diguanylate cyclase VV93_v1c04650 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c04650 SM00895 VV93_v1c04650 VV93_v1c04670 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c04670 SM01134 VV93_v1c04670 VV93_v1c04750 SM00563 Phosphate acyltransferases VV93_v1c05040 SM00400 zinc finger VV93_v1c05040 SM00493 VV93_v1c05040 VV93_v1c05040 SM00766 DNA primase DnaG DnaB-binding VV93_v1c05090 SM01207 VV93_v1c05090 VV93_v1c05100 SM00905 Dihydroneopterin aldolase VV93_v1c05140 SM00382 ATPases associated with a variety of cellular activities VV93_v1c05150 SM00287 Bacterial SH3 domain homologues VV93_v1c05180 SM00880 VV93_v1c05180 VV93_v1c05180 SM01118 VV93_v1c05180 VV93_v1c05200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c05290 SM00387 Histidine kinase-like ATPases VV93_v1c05290 SM00433 TopoisomeraseII VV93_v1c05300 SM00434 DNA Topoisomerase IV VV93_v1c05310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_v1c05320 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_v1c05430 SM00749 bacterial OsmY and nodulation domain VV93_v1c05600 SM00842 Cell division protein FtsA VV93_v1c05610 SM00864 Tubulin/FtsZ family, GTPase domain VV93_v1c05610 SM00865 Tubulin/FtsZ family, C-terminal domain VV93_v1c05640 SM00957 SecA DEAD-like domain VV93_v1c05640 SM00958 SecA preprotein cross-linking domain VV93_v1c05670 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VV93_v1c05680 SM00851 MGS-like domain VV93_v1c05680 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VV93_v1c05810 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c05820 SM00091 PAS domain VV93_v1c05820 SM00267 diguanylate cyclase VV93_v1c05830 SM00073 Histidine Phosphotransfer domain VV93_v1c05830 SM00091 PAS domain VV93_v1c05830 SM00387 Histidine kinase-like ATPases VV93_v1c05830 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c05830 SM00448 cheY-homologous receiver domain VV93_v1c05850 SM00448 cheY-homologous receiver domain VV93_v1c05850 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c05930 SM00518 AP endonuclease family 2 VV93_v1c05950 SM00986 Uracil DNA glycosylase superfamily VV93_v1c05950 SM00987 UreE urease accessory protein, C-terminal domain VV93_v1c06000 SM00487 DEAD-like helicases superfamily VV93_v1c06000 SM00490 helicase superfamily c-terminal domain VV93_v1c06070 SM00937 VV93_v1c06070 VV93_v1c06090 SM00382 ATPases associated with a variety of cellular activities VV93_v1c06140 SM00927 DNA mismatch repair enzyme MutH VV93_v1c06160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_v1c06200 SM01154 VV93_v1c06200 VV93_v1c06230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV93_v1c06260 SM00904 Riboflavin kinase VV93_v1c06310 SM00448 cheY-homologous receiver domain VV93_v1c06310 SM00850 LytTr DNA-binding domain VV93_v1c06390 SM00830 Chorismate mutase type II VV93_v1c06420 SM00382 ATPases associated with a variety of cellular activities VV93_v1c06460 SM00830 Chorismate mutase type II VV93_v1c06490 SM00363 S4 RNA-binding domain VV93_v1c06510 SM00382 ATPases associated with a variety of cellular activities VV93_v1c06510 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_v1c06700 SM00448 cheY-homologous receiver domain VV93_v1c06700 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c06710 SM00091 PAS domain VV93_v1c06710 SM00387 Histidine kinase-like ATPases VV93_v1c06710 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c06770 SM00382 ATPases associated with a variety of cellular activities VV93_v1c06890 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c06900 SM00020 Trypsin-like serine protease VV93_v1c06930 SM01323 VV93_v1c06930 VV93_v1c07040 SM00271 DnaJ molecular chaperone homology domain VV93_v1c07090 SM00562 VV93_v1c07090 VV93_v1c07150 SM00564 beta-propeller repeat VV93_v1c07160 SM00173 Ras subfamily of RAS small GTPases VV93_v1c07160 SM00382 ATPases associated with a variety of cellular activities VV93_v1c07180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_v1c07180 SM00267 diguanylate cyclase VV93_v1c07210 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c07210 SM01240 VV93_v1c07210 VV93_v1c07230 SM00495 Chitin-binding domain type 3 VV93_v1c07370 SM00563 Phosphate acyltransferases VV93_v1c07380 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c07570 SM00487 DEAD-like helicases superfamily VV93_v1c07570 SM00490 helicase superfamily c-terminal domain VV93_v1c07740 SM00271 DnaJ molecular chaperone homology domain VV93_v1c07860 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c07870 SM01211 VV93_v1c07870 VV93_v1c07970 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VV93_v1c08070 SM00861 Transketolase, pyrimidine binding domain VV93_v1c08120 SM00981 VV93_v1c08120 VV93_v1c08190 SM00477 DNA/RNA non-specific endonuclease VV93_v1c08190 SM00892 DNA/RNA non-specific endonuclease VV93_v1c08200 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VV93_v1c08200 SM00475 5'-3' exonuclease VV93_v1c08220 SM00267 diguanylate cyclase VV93_v1c08230 SM00028 Tetratricopeptide repeats VV93_v1c08290 SM00382 ATPases associated with a variety of cellular activities VV93_v1c08290 SM00930 VV93_v1c08290 VV93_v1c08310 SM00354 helix_turn _helix lactose operon repressor VV93_v1c08330 SM00642 Alpha-amylase domain VV93_v1c08370 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c08400 SM00936 Penicillin-binding protein 5, C-terminal domain VV93_v1c08510 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c08510 SM01091 Transporter associated domain VV93_v1c08540 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c08580 SM01400 VV93_v1c08580 VV93_v1c08620 SM00937 VV93_v1c08620 VV93_v1c08690 SM00363 S4 RNA-binding domain VV93_v1c08700 SM00463 Small MutS-related domain VV93_v1c08730 SM01081 Putative carbohydrate binding domain VV93_v1c08850 SM00858 VV93_v1c08850 VV93_v1c08860 SM00260 Two component signalling adaptor domain VV93_v1c08860 SM00448 cheY-homologous receiver domain VV93_v1c08870 SM00138 Methyltransferase, chemotaxis proteins VV93_v1c08960 SM00047 Lysozyme subfamily 2 VV93_v1c09070 SM00771 ZipA, C-terminal domain (FtsZ-binding) VV93_v1c09080 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV93_v1c09080 SM00292 breast cancer carboxy-terminal domain VV93_v1c09080 SM00532 Ligase N family VV93_v1c09120 SM00244 prohibitin homologues VV93_v1c09180 SM00938 Nitrogen regulatory protein P-II VV93_v1c09190 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c09240 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c09250 SM00387 Histidine kinase-like ATPases VV93_v1c09280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c09280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c09280 SM01358 VV93_v1c09280 VV93_v1c09300 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VV93_v1c09550 SM00861 Transketolase, pyrimidine binding domain VV93_v1c09580 SM00881 CoA binding domain VV93_v1c09600 SM00382 ATPases associated with a variety of cellular activities VV93_v1c09620 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c09630 SM00899 VV93_v1c09630 VV93_v1c09670 SM00836 DALR anticodon binding domain VV93_v1c09670 SM01016 Arginyl tRNA synthetase N terminal dom VV93_v1c09710 SM00487 DEAD-like helicases superfamily VV93_v1c09710 SM00491 VV93_v1c09710 VV93_v1c09770 SM00474 3'-5' exonuclease VV93_v1c09860 SM00448 cheY-homologous receiver domain VV93_v1c09860 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c09870 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c09880 SM00825 Beta-ketoacyl synthase VV93_v1c09910 SM00825 Beta-ketoacyl synthase VV93_v1c10030 SM00563 Phosphate acyltransferases VV93_v1c10090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c10090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c10110 SM00448 cheY-homologous receiver domain VV93_v1c10110 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c10120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c10120 SM00387 Histidine kinase-like ATPases VV93_v1c10160 SM00382 ATPases associated with a variety of cellular activities VV93_v1c10210 SM00382 ATPases associated with a variety of cellular activities VV93_v1c10210 SM00448 cheY-homologous receiver domain VV93_v1c10220 SM00387 Histidine kinase-like ATPases VV93_v1c10220 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c10260 SM00382 ATPases associated with a variety of cellular activities VV93_v1c10260 SM00994 ClpX C4-type zinc finger VV93_v1c10260 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_v1c10270 SM00382 ATPases associated with a variety of cellular activities VV93_v1c10270 SM00464 Found in ATP-dependent protease La (LON) VV93_v1c10280 SM00411 bacterial (prokaryotic) histone like domain VV93_v1c10320 SM01144 VV93_v1c10320 VV93_v1c10330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c10340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c10400 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VV93_v1c10440 SM00563 Phosphate acyltransferases VV93_v1c10460 SM00978 VV93_v1c10460 VV93_v1c10530 SM00344 helix_turn_helix ASNC type VV93_v1c10590 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c10590 SM00267 diguanylate cyclase VV93_v1c10630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c10650 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV93_v1c10690 SM00870 VV93_v1c10690 VV93_v1c10730 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VV93_v1c10730 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VV93_v1c10730 SM00493 VV93_v1c10730 VV93_v1c10800 SM00267 diguanylate cyclase VV93_v1c10800 SM00448 cheY-homologous receiver domain VV93_v1c10810 SM00155 Phospholipase D. Active site motifs. VV93_v1c10910 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV93_v1c11020 SM00479 VV93_v1c11020 VV93_v1c11060 SM00478 endonuclease III VV93_v1c11060 SM00525 VV93_v1c11060 VV93_v1c11080 SM00900 VV93_v1c11080 VV93_v1c11130 SM00487 DEAD-like helicases superfamily VV93_v1c11130 SM00490 helicase superfamily c-terminal domain VV93_v1c11140 SM00382 ATPases associated with a variety of cellular activities VV93_v1c11140 SM00448 cheY-homologous receiver domain VV93_v1c11170 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c11180 SM00852 Probable molybdopterin binding domain VV93_v1c11250 SM00382 ATPases associated with a variety of cellular activities VV93_v1c11260 SM00382 ATPases associated with a variety of cellular activities VV93_v1c11410 SM00481 DNA polymerase alpha chain like domain VV93_v1c11440 SM00363 S4 RNA-binding domain VV93_v1c11460 SM00841 Elongation factor P, C-terminal VV93_v1c11460 SM01185 VV93_v1c11460 VV93_v1c11480 SM00052 Putative diguanylate phosphodiesterase VV93_v1c11490 SM00486 DNA polymerase type-B family VV93_v1c11500 SM00421 helix_turn_helix, Lux Regulon VV93_v1c11500 SM00448 cheY-homologous receiver domain VV93_v1c11510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV93_v1c11510 SM00465 GIY-YIG type nucleases (URI domain) VV93_v1c11610 SM00852 Probable molybdopterin binding domain VV93_v1c11660 SM00434 DNA Topoisomerase IV VV93_v1c11820 SM00226 Low molecular weight phosphatase family VV93_v1c11840 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c11850 SM00363 S4 RNA-binding domain VV93_v1c11910 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VV93_v1c11920 SM00822 VV93_v1c11920 VV93_v1c11940 SM00825 Beta-ketoacyl synthase VV93_v1c12090 SM00260 Two component signalling adaptor domain VV93_v1c12090 SM00448 cheY-homologous receiver domain VV93_v1c12100 SM00481 DNA polymerase alpha chain like domain VV93_v1c12130 SM00822 VV93_v1c12130 VV93_v1c12160 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c12170 SM00411 bacterial (prokaryotic) histone like domain VV93_v1c12190 SM00028 Tetratricopeptide repeats VV93_v1c12200 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VV93_v1c12240 SM00382 ATPases associated with a variety of cellular activities VV93_v1c12250 SM00382 ATPases associated with a variety of cellular activities VV93_v1c12340 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VV93_v1c12340 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VV93_v1c12350 SM00344 helix_turn_helix ASNC type VV93_v1c12360 SM00843 VV93_v1c12360 VV93_v1c12380 SM00382 ATPases associated with a variety of cellular activities VV93_v1c12410 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c12410 SM00876 Biotin and Thiamin Synthesis associated domain VV93_v1c12600 SM00528 Domain in histone-like proteins of HNS family VV93_v1c12720 SM00052 Putative diguanylate phosphodiesterase VV93_v1c12750 SM00840 VV93_v1c12750 VV93_v1c12940 SM01131 VV93_v1c12940 VV93_v1c12970 SM00382 ATPases associated with a variety of cellular activities VV93_v1c12980 SM00382 ATPases associated with a variety of cellular activities VV93_v1c13020 SM00382 ATPases associated with a variety of cellular activities VV93_v1c13110 SM00155 Phospholipase D. Active site motifs. VV93_v1c13130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c13130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c13200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_v1c13200 SM00382 ATPases associated with a variety of cellular activities VV93_v1c13220 SM00382 ATPases associated with a variety of cellular activities VV93_v1c13280 SM00267 diguanylate cyclase VV93_v1c13320 SM00387 Histidine kinase-like ATPases VV93_v1c13330 SM00448 cheY-homologous receiver domain VV93_v1c13330 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c13350 SM00487 DEAD-like helicases superfamily VV93_v1c13350 SM00490 helicase superfamily c-terminal domain VV93_v1c13380 SM00363 S4 RNA-binding domain VV93_v1c13430 SM00382 ATPases associated with a variety of cellular activities VV93_v1c13600 SM00448 cheY-homologous receiver domain VV93_v1c13610 SM00387 Histidine kinase-like ATPases VV93_v1c13640 SM00382 ATPases associated with a variety of cellular activities VV93_v1c13650 SM00382 ATPases associated with a variety of cellular activities VV93_v1c13700 SM00267 diguanylate cyclase VV93_v1c13730 SM00919 Malic enzyme, NAD binding domain VV93_v1c13730 SM01274 VV93_v1c13730 VV93_v1c13740 SM00487 DEAD-like helicases superfamily VV93_v1c13740 SM00490 helicase superfamily c-terminal domain VV93_v1c13740 SM00847 Helicase associated domain (HA2) Add an annotation VV93_v1c13870 SM00855 Phosphoglycerate mutase family VV93_v1c13910 SM00382 ATPases associated with a variety of cellular activities VV93_v1c14000 SM00028 Tetratricopeptide repeats VV93_v1c14120 SM00267 diguanylate cyclase VV93_v1c14130 SM00357 Cold shock protein domain VV93_v1c14160 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c14160 SM01134 VV93_v1c14160 VV93_v1c14170 SM00382 ATPases associated with a variety of cellular activities VV93_v1c14210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c14220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c14220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c14240 SM00020 Trypsin-like serine protease VV93_v1c14250 SM00421 helix_turn_helix, Lux Regulon VV93_v1c14330 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c14330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c14330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c14340 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c14340 SM00895 VV93_v1c14340 VV93_v1c14420 SM00020 Trypsin-like serine protease VV93_v1c14420 SM00495 Chitin-binding domain type 3 VV93_v1c14440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c14440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c14480 SM00028 Tetratricopeptide repeats VV93_v1c14480 SM00267 diguanylate cyclase VV93_v1c14530 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VV93_v1c14540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c14590 SM00382 ATPases associated with a variety of cellular activities VV93_v1c14620 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c14660 SM00563 Phosphate acyltransferases VV93_v1c14730 SM00421 helix_turn_helix, Lux Regulon VV93_v1c14790 SM00091 PAS domain VV93_v1c14790 SM00387 Histidine kinase-like ATPases VV93_v1c14800 SM00448 cheY-homologous receiver domain VV93_v1c14830 SM01350 VV93_v1c14830 VV93_v1c15020 SM00382 ATPases associated with a variety of cellular activities VV93_v1c15020 SM00448 cheY-homologous receiver domain VV93_v1c15030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c15030 SM00387 Histidine kinase-like ATPases VV93_v1c15030 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c15030 SM00448 cheY-homologous receiver domain VV93_v1c15100 SM00028 Tetratricopeptide repeats VV93_v1c15100 SM00267 diguanylate cyclase VV93_v1c15190 SM00382 ATPases associated with a variety of cellular activities VV93_v1c15210 SM00945 ProQ/FINO family VV93_v1c15220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_v1c15220 SM00245 tail specific protease VV93_v1c15290 SM00981 VV93_v1c15290 VV93_v1c15310 SM00382 ATPases associated with a variety of cellular activities VV93_v1c15400 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c15470 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c15580 SM00387 Histidine kinase-like ATPases VV93_v1c15580 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c15580 SM00448 cheY-homologous receiver domain VV93_v1c15590 SM00897 FIST N domain VV93_v1c15590 SM01204 VV93_v1c15590 VV93_v1c15690 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_v1c15690 SM00419 helix_turn_helix, cAMP Regulatory protein VV93_v1c15750 SM00382 ATPases associated with a variety of cellular activities VV93_v1c15920 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VV93_v1c15990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c15990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c16000 SM00382 ATPases associated with a variety of cellular activities VV93_v1c16030 SM00387 Histidine kinase-like ATPases VV93_v1c16030 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c16040 SM00382 ATPases associated with a variety of cellular activities VV93_v1c16040 SM00448 cheY-homologous receiver domain VV93_v1c16070 SM00382 ATPases associated with a variety of cellular activities VV93_v1c16090 SM00852 Probable molybdopterin binding domain VV93_v1c16120 SM01144 VV93_v1c16120 VV93_v1c16140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c16170 SM00267 diguanylate cyclase VV93_v1c16180 SM00448 cheY-homologous receiver domain VV93_v1c16500 SM01022 VV93_v1c16500 VV93_v1c17050 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VV93_v1c17080 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c17080 SM00866 VV93_v1c17080 VV93_v1c17140 SM00020 Trypsin-like serine protease VV93_v1c17200 SM00671 Sel1-like repeats. VV93_v1c17250 SM00954 Region found in RelA / SpoT proteins VV93_v1c17260 SM00411 bacterial (prokaryotic) histone like domain VV93_v1c17320 SM00873 B3/4 domain VV93_v1c17320 SM00874 tRNA synthetase B5 domain VV93_v1c17320 SM00896 Ferredoxin-fold anticodon binding domain VV93_v1c17340 SM00267 diguanylate cyclase VV93_v1c17410 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c17490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c17490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c17590 SM00382 ATPases associated with a variety of cellular activities VV93_v1c17590 SM00487 DEAD-like helicases superfamily VV93_v1c17590 SM00490 helicase superfamily c-terminal domain VV93_v1c17590 SM00847 Helicase associated domain (HA2) Add an annotation VV93_v1c17600 SM00636 VV93_v1c17600 VV93_v1c17650 SM00028 Tetratricopeptide repeats VV93_v1c17720 SM00858 VV93_v1c17720 VV93_v1c17830 SM00479 VV93_v1c17830 VV93_v1c17840 SM00267 diguanylate cyclase VV93_v1c17840 SM01079 VV93_v1c17840 VV93_v1c17910 SM00267 diguanylate cyclase VV93_v1c18100 SM00382 ATPases associated with a variety of cellular activities VV93_v1c18110 SM00382 ATPases associated with a variety of cellular activities VV93_v1c18180 SM00046 Diacylglycerol kinase catalytic domain (presumed) VV93_v1c18210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c18220 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. VV93_v1c18270 SM00052 Putative diguanylate phosphodiesterase VV93_v1c18270 SM00267 diguanylate cyclase VV93_v1c18280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c18310 SM00052 Putative diguanylate phosphodiesterase VV93_v1c18310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VV93_v1c18310 SM00267 diguanylate cyclase VV93_v1c18320 SM00267 diguanylate cyclase VV93_v1c18330 SM00448 cheY-homologous receiver domain VV93_v1c18340 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_v1c18340 SM00387 Histidine kinase-like ATPases VV93_v1c18390 SM00091 PAS domain VV93_v1c18390 SM00382 ATPases associated with a variety of cellular activities VV93_v1c18450 SM00387 Histidine kinase-like ATPases VV93_v1c18450 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c18450 SM00448 cheY-homologous receiver domain VV93_v1c18500 SM00052 Putative diguanylate phosphodiesterase VV93_v1c18530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c18530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c18560 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c18650 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_v1c18650 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c18660 SM00479 VV93_v1c18660 VV93_v1c18670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c18670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c18690 SM00347 helix_turn_helix multiple antibiotic resistance protein VV93_v1c18700 SM00421 helix_turn_helix, Lux Regulon VV93_v1c18700 SM00448 cheY-homologous receiver domain VV93_v1c18710 SM00387 Histidine kinase-like ATPases VV93_v1c18710 SM01049 VV93_v1c18710 VV93_v1c18770 SM00849 Metallo-beta-lactamase superfamily VV93_v1c18850 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c18920 SM00642 Alpha-amylase domain VV93_v1c18930 SM00382 ATPases associated with a variety of cellular activities VV93_v1c19030 SM00052 Putative diguanylate phosphodiesterase VV93_v1c19030 SM00091 PAS domain VV93_v1c19040 SM00052 Putative diguanylate phosphodiesterase VV93_v1c19040 SM00091 PAS domain VV93_v1c19050 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c19060 SM00052 Putative diguanylate phosphodiesterase VV93_v1c19060 SM00267 diguanylate cyclase VV93_v1c19060 SM01049 VV93_v1c19060 VV93_v1c19090 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c19170 SM01007 Class II Aldolase and Adducin N-terminal domain VV93_v1c19220 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c19220 SM01134 VV93_v1c19220 VV93_v1c19230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c19320 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c19340 SM00487 DEAD-like helicases superfamily VV93_v1c19340 SM00490 helicase superfamily c-terminal domain VV93_v1c19410 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c19430 SM00448 cheY-homologous receiver domain VV93_v1c19430 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c19490 SM00267 diguanylate cyclase VV93_v1c19530 SM01007 Class II Aldolase and Adducin N-terminal domain VV93_v1c19560 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c19560 SM01134 VV93_v1c19560 VV93_v1c19720 SM00857 Resolvase, N terminal domain VV93_v1c19760 SM00387 Histidine kinase-like ATPases VV93_v1c19760 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c19760 SM00448 cheY-homologous receiver domain VV93_v1c19830 SM00028 Tetratricopeptide repeats VV93_v1c19940 SM00382 ATPases associated with a variety of cellular activities VV93_v1c19950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VV93_v1c19960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c20090 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c20150 SM00448 cheY-homologous receiver domain VV93_v1c20150 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c20170 SM00354 helix_turn _helix lactose operon repressor VV93_v1c20240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VV93_v1c20240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VV93_v1c20240 SM00493 VV93_v1c20240 VV93_v1c20310 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c20320 SM00382 ATPases associated with a variety of cellular activities VV93_v1c20320 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_v1c20340 SM00357 Cold shock protein domain VV93_v1c20390 SM00491 VV93_v1c20390 VV93_v1c20430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c20430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c20450 SM01276 VV93_v1c20450 VV93_v1c20480 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c20480 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VV93_v1c20490 SM00382 ATPases associated with a variety of cellular activities VV93_v1c20540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c20540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c20590 SM00763 PrkA AAA domain VV93_v1c20620 SM00267 diguanylate cyclase VV93_v1c20660 SM00382 ATPases associated with a variety of cellular activities VV93_v1c20670 SM00849 Metallo-beta-lactamase superfamily VV93_v1c20700 SM00382 ATPases associated with a variety of cellular activities VV93_v1c20730 SM00487 DEAD-like helicases superfamily VV93_v1c20730 SM00490 helicase superfamily c-terminal domain VV93_v1c20730 SM00982 VV93_v1c20730 VV93_v1c20730 SM01058 CarD-like/TRCF domain VV93_v1c20830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c20830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c20870 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c20880 SM00267 diguanylate cyclase VV93_v1c20920 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c20940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c20940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c20960 SM00267 diguanylate cyclase VV93_v1c21020 SM00098 Alkaline phosphatase homologues VV93_v1c21090 SM00448 cheY-homologous receiver domain VV93_v1c21090 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c21100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c21100 SM00387 Histidine kinase-like ATPases VV93_v1c21100 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c21160 SM00493 VV93_v1c21160 VV93_v1c21180 SM00382 ATPases associated with a variety of cellular activities VV93_v1c21210 SM00448 cheY-homologous receiver domain VV93_v1c21300 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV93_v1c21320 SM00825 Beta-ketoacyl synthase VV93_v1c21390 SM00463 Small MutS-related domain VV93_v1c21400 SM00855 Phosphoglycerate mutase family VV93_v1c21580 SM00382 ATPases associated with a variety of cellular activities VV93_v1c21600 SM00260 Two component signalling adaptor domain VV93_v1c21610 SM00260 Two component signalling adaptor domain VV93_v1c21630 SM00448 cheY-homologous receiver domain VV93_v1c21640 SM00073 Histidine Phosphotransfer domain VV93_v1c21640 SM00260 Two component signalling adaptor domain VV93_v1c21640 SM00387 Histidine kinase-like ATPases VV93_v1c21640 SM01231 VV93_v1c21640 VV93_v1c21660 SM00448 cheY-homologous receiver domain VV93_v1c21690 SM00382 ATPases associated with a variety of cellular activities VV93_v1c21690 SM00962 SRP54-type protein, GTPase domain VV93_v1c21810 SM00382 ATPases associated with a variety of cellular activities VV93_v1c21860 SM00382 ATPases associated with a variety of cellular activities VV93_v1c21860 SM00448 cheY-homologous receiver domain VV93_v1c21870 SM00387 Histidine kinase-like ATPases VV93_v1c21870 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c21880 SM00382 ATPases associated with a variety of cellular activities VV93_v1c22060 SM01130 VV93_v1c22060 VV93_v1c22140 SM00857 Resolvase, N terminal domain VV93_v1c22200 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c22330 SM00028 Tetratricopeptide repeats VV93_v1c22500 SM00479 VV93_v1c22500 VV93_v1c22530 SM00849 Metallo-beta-lactamase superfamily VV93_v1c22540 SM00257 Lysin motif VV93_v1c22570 SM00938 Nitrogen regulatory protein P-II VV93_v1c22590 SM00977 TilS substrate C-terminal domain VV93_v1c22610 SM00481 DNA polymerase alpha chain like domain VV93_v1c22670 SM00935 Outer membrane protein (OmpH-like) VV93_v1c22690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_v1c22780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c22960 SM00495 Chitin-binding domain type 3 VV93_v1c22960 SM00636 VV93_v1c22960 VV93_v1c22980 SM00487 DEAD-like helicases superfamily VV93_v1c22980 SM00490 helicase superfamily c-terminal domain VV93_v1c23000 SM00267 diguanylate cyclase VV93_v1c23000 SM00448 cheY-homologous receiver domain VV93_v1c23060 SM00900 VV93_v1c23060 VV93_v1c23240 SM00925 MltA specific insert domain VV93_v1c23410 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c23410 SM01134 VV93_v1c23410 VV93_v1c23490 SM00354 helix_turn _helix lactose operon repressor VV93_v1c23500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c23500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c23500 SM01049 VV93_v1c23500 VV93_v1c23530 SM00354 helix_turn _helix lactose operon repressor VV93_v1c23580 SM00354 helix_turn _helix lactose operon repressor VV93_v1c23600 SM01038 Beta galactosidase small chain VV93_v1c23680 SM00028 Tetratricopeptide repeats VV93_v1c23780 SM00858 VV93_v1c23780 VV93_v1c23830 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c23890 SM00838 Elongation factor G C-terminus VV93_v1c23890 SM00889 Elongation factor G, domain IV VV93_v1c23920 SM00267 diguanylate cyclase VV93_v1c23930 SM00382 ATPases associated with a variety of cellular activities VV93_v1c23990 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VV93_v1c24000 SM01133 VV93_v1c24000 VV93_v1c24050 SM00267 diguanylate cyclase VV93_v1c24060 SM00052 Putative diguanylate phosphodiesterase VV93_v1c24060 SM00267 diguanylate cyclase VV93_v1c24110 SM00052 Putative diguanylate phosphodiesterase VV93_v1c24110 SM00091 PAS domain VV93_v1c24110 SM00267 diguanylate cyclase VV93_v1c24150 SM00347 helix_turn_helix multiple antibiotic resistance protein VV93_v1c24160 SM00028 Tetratricopeptide repeats VV93_v1c24170 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c24170 SM00322 K homology RNA-binding domain VV93_v1c24220 SM01387 VV93_v1c24220 VV93_v1c24260 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c24310 SM00382 ATPases associated with a variety of cellular activities VV93_v1c24330 SM01103 VV93_v1c24330 VV93_v1c24460 SM00091 PAS domain VV93_v1c24460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c24460 SM00387 Histidine kinase-like ATPases VV93_v1c24460 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c24460 SM00448 cheY-homologous receiver domain VV93_v1c24500 SM00382 ATPases associated with a variety of cellular activities VV93_v1c24510 SM00382 ATPases associated with a variety of cellular activities VV93_v1c24550 SM01068 Putative carbohydrate binding domain VV93_v1c24570 SM00382 ATPases associated with a variety of cellular activities VV93_v1c24610 SM00938 Nitrogen regulatory protein P-II VV93_v1c24690 SM00487 DEAD-like helicases superfamily VV93_v1c24690 SM00490 helicase superfamily c-terminal domain VV93_v1c24690 SM00847 Helicase associated domain (HA2) Add an annotation VV93_v1c24780 SM00382 ATPases associated with a variety of cellular activities VV93_v1c24800 SM00947 Carbonic anhydrase VV93_v1c24860 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c24860 SM00895 VV93_v1c24860 VV93_v1c24870 SM00644 VV93_v1c24870 VV93_v1c25000 SM00382 ATPases associated with a variety of cellular activities VV93_v1c25000 SM00962 SRP54-type protein, GTPase domain VV93_v1c25000 SM00963 SRP54-type protein, helical bundle domain VV93_v1c25020 SM01091 Transporter associated domain VV93_v1c25080 SM00829 Enoylreductase VV93_v1c25140 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VV93_v1c25160 SM00382 ATPases associated with a variety of cellular activities VV93_v1c25180 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VV93_v1c25180 SM00534 ATPase domain of DNA mismatch repair MUTS family VV93_v1c25200 SM00257 Lysin motif VV93_v1c25270 SM01192 VV93_v1c25270 VV93_v1c25270 SM01193 VV93_v1c25270 VV93_v1c25300 SM00954 Region found in RelA / SpoT proteins VV93_v1c25320 SM00073 Histidine Phosphotransfer domain VV93_v1c25320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c25320 SM00387 Histidine kinase-like ATPases VV93_v1c25320 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c25320 SM00448 cheY-homologous receiver domain VV93_v1c25330 SM00267 diguanylate cyclase VV93_v1c25400 SM00358 Double-stranded RNA binding motif VV93_v1c25400 SM00535 Ribonuclease III family VV93_v1c25420 SM00838 Elongation factor G C-terminus VV93_v1c25660 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV93_v1c25680 SM00861 Transketolase, pyrimidine binding domain VV93_v1c25710 SM00731 SprT homologues. VV93_v1c25770 SM00732 Likely ribonuclease with RNase H fold. VV93_v1c25830 SM01152 VV93_v1c25830 VV93_v1c25860 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c25870 SM00478 endonuclease III VV93_v1c25900 SM00478 endonuclease III VV93_v1c25900 SM00525 VV93_v1c25900 VV93_v1c25930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c25930 SM01049 VV93_v1c25930 VV93_v1c25950 SM00849 Metallo-beta-lactamase superfamily VV93_v1c26000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c26020 SM00354 helix_turn _helix lactose operon repressor VV93_v1c26080 SM00495 Chitin-binding domain type 3 VV93_v1c26480 SM00487 DEAD-like helicases superfamily VV93_v1c26480 SM00490 helicase superfamily c-terminal domain VV93_v1c26490 SM00670 Large family of predicted nucleotide-binding domains VV93_v1c26530 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c26670 SM00382 ATPases associated with a variety of cellular activities VV93_v1c26680 SM00028 Tetratricopeptide repeats VV93_v1c26700 SM00965 Secretin and TonB N terminus short domain VV93_v1c26740 SM00052 Putative diguanylate phosphodiesterase VV93_v1c26740 SM00267 diguanylate cyclase VV93_v1c26760 SM00421 helix_turn_helix, Lux Regulon VV93_v1c26820 SM01018 B12 binding domain VV93_v1c26840 SM00091 PAS domain VV93_v1c26840 SM00267 diguanylate cyclase VV93_v1c27070 SM01005 Alanine racemase, C-terminal domain VV93_v1c27190 SM00965 Secretin and TonB N terminus short domain VV93_v1c27300 SM00859 Semialdehyde dehydrogenase, NAD binding domain VV93_v1c27380 SM00919 Malic enzyme, NAD binding domain VV93_v1c27380 SM01274 VV93_v1c27380 VV93_v1c27400 SM00487 DEAD-like helicases superfamily VV93_v1c27400 SM00490 helicase superfamily c-terminal domain VV93_v1c27410 SM00354 helix_turn _helix lactose operon repressor VV93_v1c27440 SM00382 ATPases associated with a variety of cellular activities VV93_v1c27440 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_v1c27580 SM00838 Elongation factor G C-terminus VV93_v1c27580 SM00889 Elongation factor G, domain IV VV93_v1c27660 SM00320 WD40 repeats VV93_v1c27730 SM00382 ATPases associated with a variety of cellular activities VV93_v1c27780 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_v1c27780 SM00419 helix_turn_helix, cAMP Regulatory protein VV93_v1c27790 SM01150 VV93_v1c27790 VV93_v1c27880 SM00967 RNA 2'-O ribose methyltransferase substrate binding VV93_v1c27890 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c27890 SM00357 Cold shock protein domain VV93_v1c27890 SM00955 VV93_v1c27890 VV93_v1c27930 SM00671 Sel1-like repeats. VV93_v1c27940 SM00788 Adenylosuccinate synthetase VV93_v1c27960 SM00244 prohibitin homologues VV93_v1c27970 SM00244 prohibitin homologues VV93_v1c28010 SM00853 MutL C terminal dimerisation domain VV93_v1c28010 SM01340 VV93_v1c28010 VV93_v1c28020 SM00257 Lysin motif VV93_v1c28020 SM00646 VV93_v1c28020 VV93_v1c28050 SM00479 VV93_v1c28050 VV93_v1c28110 SM00450 Rhodanese Homology Domain VV93_v1c28140 SM00971 Serine acetyltransferase, N-terminal VV93_v1c28250 SM00841 Elongation factor P, C-terminal VV93_v1c28250 SM01185 VV93_v1c28250 VV93_v1c28300 SM00883 Chaperonin 10 Kd subunit VV93_v1c28350 SM00448 cheY-homologous receiver domain VV93_v1c28350 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c28360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c28360 SM00387 Histidine kinase-like ATPases VV93_v1c28360 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c28430 SM00421 helix_turn_helix, Lux Regulon VV93_v1c28430 SM00448 cheY-homologous receiver domain VV93_v1c28470 SM00387 Histidine kinase-like ATPases VV93_v1c28470 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c28470 SM00448 cheY-homologous receiver domain VV93_v1c28490 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_v1c28500 SM00479 VV93_v1c28500 VV93_v1c28540 SM00878 Biotin carboxylase C-terminal domain VV93_v1c28580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c28580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c28580 SM01049 VV93_v1c28580 VV93_v1c28590 SM00422 helix_turn_helix, mercury resistance VV93_v1c28600 SM00798 AICARFT/IMPCHase bienzyme VV93_v1c28600 SM00851 MGS-like domain VV93_v1c28610 SM01209 VV93_v1c28610 VV93_v1c28610 SM01210 VV93_v1c28610 VV93_v1c28650 SM00411 bacterial (prokaryotic) histone like domain VV93_v1c28690 SM00986 Uracil DNA glycosylase superfamily VV93_v1c28690 SM00987 UreE urease accessory protein, C-terminal domain VV93_v1c28750 SM00663 RNA polymerase I subunit A N-terminus VV93_v1c28800 SM00649 Ribosomal protein L11/L12 VV93_v1c28810 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VV93_v1c28810 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VV93_v1c28880 SM00155 Phospholipase D. Active site motifs. VV93_v1c29020 SM00357 Cold shock protein domain VV93_v1c29020 SM00382 ATPases associated with a variety of cellular activities VV93_v1c29020 SM00959 Rho termination factor, N-terminal domain VV93_v1c29040 SM00487 DEAD-like helicases superfamily VV93_v1c29040 SM00490 helicase superfamily c-terminal domain VV93_v1c29080 SM00341 Helicase and RNase D C-terminal VV93_v1c29080 SM00487 DEAD-like helicases superfamily VV93_v1c29080 SM00490 helicase superfamily c-terminal domain VV93_v1c29080 SM00956 VV93_v1c29080 VV93_v1c29110 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c29210 SM00876 Biotin and Thiamin Synthesis associated domain VV93_v1c29410 SM01001 AIR carboxylase VV93_v1c29460 SM00257 Lysin motif VV93_v1c29590 SM00563 Phosphate acyltransferases VV93_v1c29610 SM00382 ATPases associated with a variety of cellular activities VV93_v1c29690 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c29730 SM00382 ATPases associated with a variety of cellular activities VV93_v1c29810 SM00470 ParB-like nuclease domain VV93_v1c29840 SM01228 VV93_v1c29840 VV93_v1c29990 SM00487 DEAD-like helicases superfamily VV93_v1c30090 SM00382 ATPases associated with a variety of cellular activities VV93_v1c30110 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c30140 SM00382 ATPases associated with a variety of cellular activities VV93_v1c30150 SM00382 ATPases associated with a variety of cellular activities VV93_v1c30190 SM00387 Histidine kinase-like ATPases VV93_v1c30190 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c30190 SM00448 cheY-homologous receiver domain VV93_v1c30250 SM00382 ATPases associated with a variety of cellular activities VV93_v1c30290 SM00387 Histidine kinase-like ATPases VV93_v1c30300 SM00448 cheY-homologous receiver domain VV93_v1c30300 SM00850 LytTr DNA-binding domain VV93_v1c30310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c30310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c30310 SM01049 VV93_v1c30310 VV93_v1c30380 SM01154 VV93_v1c30380 VV93_v1c30430 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c30430 SM01009 AlkA N-terminal domain VV93_v1c30530 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins VV93_v1c30530 SM00495 Chitin-binding domain type 3 VV93_v1c30530 SM00636 VV93_v1c30530 VV93_v1c30580 SM00267 diguanylate cyclase VV93_v1c30590 SM00267 diguanylate cyclase VV93_v1c30600 SM00642 Alpha-amylase domain VV93_v1c30650 SM00642 Alpha-amylase domain VV93_v1c30660 SM00671 Sel1-like repeats. VV93_v1c30780 SM00100 Cyclic nucleotide-monophosphate binding domain VV93_v1c30780 SM00419 helix_turn_helix, cAMP Regulatory protein VV93_v1c30870 SM00421 helix_turn_helix, Lux Regulon VV93_v1c30910 SM00642 Alpha-amylase domain VV93_v1c30920 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c30940 SM00344 helix_turn_helix ASNC type VV93_v1c30990 SM00495 Chitin-binding domain type 3 VV93_v1c31030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c31030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c31050 SM00052 Putative diguanylate phosphodiesterase VV93_v1c31090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c31150 SM00387 Histidine kinase-like ATPases VV93_v1c31150 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c31160 SM00448 cheY-homologous receiver domain VV93_v1c31160 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c31180 SM00822 VV93_v1c31180 VV93_v1c31190 SM01236 VV93_v1c31190 VV93_v1c31210 SM00267 diguanylate cyclase VV93_v1c31250 SM00354 helix_turn _helix lactose operon repressor VV93_v1c31300 SM00382 ATPases associated with a variety of cellular activities VV93_v1c31310 SM00354 helix_turn _helix lactose operon repressor VV93_v1c31360 SM00382 ATPases associated with a variety of cellular activities VV93_v1c31370 SM00382 ATPases associated with a variety of cellular activities VV93_v1c31390 SM00354 helix_turn _helix lactose operon repressor VV93_v1c31430 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c31440 SM01217 VV93_v1c31440 VV93_v1c31530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_v1c31530 SM00267 diguanylate cyclase VV93_v1c31570 SM00354 helix_turn _helix lactose operon repressor VV93_v1c31590 SM00382 ATPases associated with a variety of cellular activities VV93_v1c31610 SM01038 Beta galactosidase small chain VV93_v1c31700 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c31700 SM00871 Bacterial transcription activator, effector binding domain VV93_v1c31750 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c31850 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VV93_v1c31980 SM00357 Cold shock protein domain VV93_v1c32160 SM00849 Metallo-beta-lactamase superfamily VV93_v1c32200 SM00421 helix_turn_helix, Lux Regulon VV93_v1c32250 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c32270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_v1c32270 SM00267 diguanylate cyclase VV93_v1c32290 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c32310 SM00642 Alpha-amylase domain VV93_v1c32360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c32360 SM00387 Histidine kinase-like ATPases VV93_v1c32360 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c32370 SM00448 cheY-homologous receiver domain VV93_v1c32370 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c32530 SM00014 Acid phosphatase homologues VV93_v1c32620 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c32710 SM00267 diguanylate cyclase VV93_v1c32710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c32760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c32780 SM00481 DNA polymerase alpha chain like domain VV93_v1c32810 SM00248 ankyrin repeats VV93_v1c32820 SM01060 VV93_v1c32820 VV93_v1c32920 SM00829 Enoylreductase VV93_v1c33040 SM00849 Metallo-beta-lactamase superfamily VV93_v1c33090 SM00421 helix_turn_helix, Lux Regulon VV93_v1c33090 SM00448 cheY-homologous receiver domain VV93_v1c33100 SM00267 diguanylate cyclase VV93_v1c33110 SM00421 helix_turn_helix, Lux Regulon VV93_v1c33110 SM00448 cheY-homologous receiver domain VV93_v1c33120 SM00052 Putative diguanylate phosphodiesterase VV93_v1c33120 SM00448 cheY-homologous receiver domain VV93_v1c33130 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c33130 SM00387 Histidine kinase-like ATPases VV93_v1c33130 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c33130 SM00448 cheY-homologous receiver domain VV93_v1c33160 SM00382 ATPases associated with a variety of cellular activities VV93_v1c33210 SM01057 Eukaryotic-type carbonic anhydrase VV93_v1c33300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VV93_v1c33300 SM00245 tail specific protease VV93_v1c33330 SM00382 ATPases associated with a variety of cellular activities VV93_v1c33370 SM00267 diguanylate cyclase VV93_v1c33380 SM00028 Tetratricopeptide repeats VV93_v1c33420 SM00422 helix_turn_helix, mercury resistance VV93_v1c33440 SM00257 Lysin motif VV93_v1c33460 SM00487 DEAD-like helicases superfamily VV93_v1c33460 SM00490 helicase superfamily c-terminal domain VV93_v1c33540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c33540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c33550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c33550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c33590 SM00382 ATPases associated with a variety of cellular activities VV93_v1c33600 SM00267 diguanylate cyclase VV93_v1c33620 SM00028 Tetratricopeptide repeats VV93_v1c33620 SM00327 von Willebrand factor (vWF) type A domain VV93_v1c33630 SM00327 von Willebrand factor (vWF) type A domain VV93_v1c33670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c33670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c33690 SM00421 helix_turn_helix, Lux Regulon VV93_v1c33700 SM00421 helix_turn_helix, Lux Regulon VV93_v1c33720 SM00382 ATPases associated with a variety of cellular activities VV93_v1c33830 SM00382 ATPases associated with a variety of cellular activities VV93_v1c33900 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c33930 SM00267 diguanylate cyclase VV93_v1c34050 SM00382 ATPases associated with a variety of cellular activities VV93_v1c34110 SM00729 Elongator protein 3, MiaB family, Radical SAM VV93_v1c34150 SM00260 Two component signalling adaptor domain VV93_v1c34150 SM00448 cheY-homologous receiver domain VV93_v1c34180 SM00642 Alpha-amylase domain VV93_v1c34190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c34190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c34200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c34200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c34380 SM00267 diguanylate cyclase VV93_v1c34380 SM01079 VV93_v1c34380 VV93_v1c34390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c34390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c34400 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c34420 SM00267 diguanylate cyclase VV93_v1c34450 SM01266 VV93_v1c34450 VV93_v1c34490 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c34510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c34540 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c34540 SM00871 Bacterial transcription activator, effector binding domain VV93_v1c34590 SM00382 ATPases associated with a variety of cellular activities VV93_v1c34610 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c34610 SM00866 VV93_v1c34610 VV93_v1c34710 SM00936 Penicillin-binding protein 5, C-terminal domain VV93_v1c34780 SM00422 helix_turn_helix, mercury resistance VV93_v1c34870 SM00387 Histidine kinase-like ATPases VV93_v1c34870 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c34870 SM00448 cheY-homologous receiver domain VV93_v1c34880 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c34970 SM00849 Metallo-beta-lactamase superfamily VV93_v1c35030 SM00635 Bacterial Ig-like domain 2 VV93_v1c35070 SM00974 VV93_v1c35070 VV93_v1c35120 SM00028 Tetratricopeptide repeats VV93_v1c35180 SM00382 ATPases associated with a variety of cellular activities VV93_v1c35370 SM00450 Rhodanese Homology Domain VV93_v1c35530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c35530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c35580 SM01022 VV93_v1c35580 VV93_v1c35590 SM00014 Acid phosphatase homologues VV93_v1c35660 SM00382 ATPases associated with a variety of cellular activities VV93_v1c35670 SM00327 von Willebrand factor (vWF) type A domain VV93_v1c35720 SM00382 ATPases associated with a variety of cellular activities VV93_v1c35760 SM00354 helix_turn _helix lactose operon repressor VV93_v1c35780 SM00260 Two component signalling adaptor domain VV93_v1c35780 SM00448 cheY-homologous receiver domain VV93_v1c35820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VV93_v1c35820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c35870 SM00091 PAS domain VV93_v1c35870 SM00387 Histidine kinase-like ATPases VV93_v1c35870 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c35870 SM00448 cheY-homologous receiver domain VV93_v1c35880 SM00448 cheY-homologous receiver domain VV93_v1c35880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c36060 SM00327 von Willebrand factor (vWF) type A domain VV93_v1c36130 SM00387 Histidine kinase-like ATPases VV93_v1c36140 SM00448 cheY-homologous receiver domain VV93_v1c36150 SM01266 VV93_v1c36150 VV93_v1c36220 SM00382 ATPases associated with a variety of cellular activities VV93_v1c36230 SM00422 helix_turn_helix, mercury resistance VV93_v1c36310 SM00851 MGS-like domain VV93_v1c36330 SM00073 Histidine Phosphotransfer domain VV93_v1c36330 SM00387 Histidine kinase-like ATPases VV93_v1c36330 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c36330 SM00448 cheY-homologous receiver domain VV93_v1c36430 SM00487 DEAD-like helicases superfamily VV93_v1c36430 SM00490 helicase superfamily c-terminal domain VV93_v1c36440 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c36440 SM00387 Histidine kinase-like ATPases VV93_v1c36440 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c36440 SM00448 cheY-homologous receiver domain VV93_v1c36450 SM00052 Putative diguanylate phosphodiesterase VV93_v1c36450 SM00421 helix_turn_helix, Lux Regulon VV93_v1c36450 SM00448 cheY-homologous receiver domain VV93_v1c36530 SM00635 Bacterial Ig-like domain 2 VV93_v1c36560 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c36570 SM00316 Ribosomal protein S1-like RNA-binding domain VV93_v1c36570 SM00357 Cold shock protein domain VV93_v1c36570 SM00955 VV93_v1c36570 VV93_v1c36580 SM00487 DEAD-like helicases superfamily VV93_v1c36580 SM00490 helicase superfamily c-terminal domain VV93_v1c36670 SM00327 von Willebrand factor (vWF) type A domain VV93_v1c36740 SM00028 Tetratricopeptide repeats VV93_v1c36750 SM00990 VV93_v1c36750 VV93_v1c36870 SM00382 ATPases associated with a variety of cellular activities VV93_v1c36930 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c36950 SM00020 Trypsin-like serine protease VV93_v1c37040 SM00354 helix_turn _helix lactose operon repressor VV93_v1c37080 SM00052 Putative diguanylate phosphodiesterase VV93_v1c37120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c37120 SM00387 Histidine kinase-like ATPases VV93_v1c37120 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c37130 SM00448 cheY-homologous receiver domain VV93_v1c37150 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c37160 SM00495 Chitin-binding domain type 3 VV93_v1c37160 SM00636 VV93_v1c37160 VV93_v1c37220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c37240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c37270 SM00487 DEAD-like helicases superfamily VV93_v1c37270 SM00490 helicase superfamily c-terminal domain VV93_v1c37280 SM00052 Putative diguanylate phosphodiesterase VV93_v1c37310 SM00867 YceI-like domain VV93_v1c37320 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c37430 SM00782 PhnA Zinc-Ribbon VV93_v1c37520 SM00642 Alpha-amylase domain VV93_v1c37570 SM00271 DnaJ molecular chaperone homology domain VV93_v1c37600 SM00052 Putative diguanylate phosphodiesterase VV93_v1c37600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VV93_v1c37600 SM00267 diguanylate cyclase VV93_v1c37630 SM00382 ATPases associated with a variety of cellular activities VV93_v1c37660 SM00797 Allophanate hydrolase subunit 2 VV93_v1c37670 SM00796 Allophanate hydrolase subunit 1 VV93_v1c37700 SM00091 PAS domain VV93_v1c37700 SM00267 diguanylate cyclase VV93_v1c37730 SM00881 CoA binding domain VV93_v1c37880 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c37910 SM00479 VV93_v1c37910 VV93_v1c38110 SM00530 Helix-turn-helix XRE-family like proteins VV93_v1c38160 SM00448 cheY-homologous receiver domain VV93_v1c38160 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c38170 SM00387 Histidine kinase-like ATPases VV93_v1c38170 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c38190 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VV93_v1c38190 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VV93_v1c38220 SM00267 diguanylate cyclase VV93_v1c38240 SM00267 diguanylate cyclase VV93_v1c38240 SM00448 cheY-homologous receiver domain VV93_v1c38260 SM00347 helix_turn_helix multiple antibiotic resistance protein VV93_v1c38280 SM00382 ATPases associated with a variety of cellular activities VV93_v1c38360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c38360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c38440 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV93_v1c38460 SM00450 Rhodanese Homology Domain VV93_v1c38520 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c38560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c38560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c38560 SM01049 VV93_v1c38560 VV93_v1c38580 SM00028 Tetratricopeptide repeats VV93_v1c38700 SM00091 PAS domain VV93_v1c38700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c38740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c38740 SM00387 Histidine kinase-like ATPases VV93_v1c38740 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c38740 SM00448 cheY-homologous receiver domain VV93_v1c38750 SM00138 Methyltransferase, chemotaxis proteins VV93_v1c38770 SM00267 diguanylate cyclase VV93_v1c38770 SM00448 cheY-homologous receiver domain VV93_v1c38800 SM00487 DEAD-like helicases superfamily VV93_v1c38800 SM00490 helicase superfamily c-terminal domain VV93_v1c38820 SM00833 Cobalamin synthesis protein cobW C-terminal domain VV93_v1c38840 SM00028 Tetratricopeptide repeats VV93_v1c38840 SM00267 diguanylate cyclase VV93_v1c38880 SM00382 ATPases associated with a variety of cellular activities VV93_v1c38910 SM01012 VV93_v1c38910 VV93_v1c38950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VV93_v1c38970 SM00642 Alpha-amylase domain VV93_v1c38980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c38980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c38990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c38990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c39010 SM00458 Ricin-type beta-trefoil VV93_v1c39240 SM00382 ATPases associated with a variety of cellular activities VV93_v1c39240 SM01086 C-terminal, D2-small domain, of ClpB protein VV93_v1c39320 SM00331 Sigma factor PP2C-like phosphatases VV93_v1c39320 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VV93_v1c39410 SM00240 Forkhead associated domain VV93_v1c39420 SM00220 Serine/Threonine protein kinases, catalytic domain VV93_v1c39490 SM00052 Putative diguanylate phosphodiesterase VV93_v1c39490 SM00267 diguanylate cyclase VV93_v1c39600 SM00387 Histidine kinase-like ATPases VV93_v1c39610 SM00448 cheY-homologous receiver domain VV93_v1c39610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c39650 SM00861 Transketolase, pyrimidine binding domain VV93_v1c39670 SM00893 Electron transfer flavoprotein domain VV93_v1c39680 SM00893 Electron transfer flavoprotein domain VV93_v1c39710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c39710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c39720 SM01005 Alanine racemase, C-terminal domain VV93_v1c39760 SM00382 ATPases associated with a variety of cellular activities VV93_v1c39780 SM00382 ATPases associated with a variety of cellular activities VV93_v1c39790 SM00822 VV93_v1c39790 VV93_v1c39870 SM00422 helix_turn_helix, mercury resistance VV93_v1c39940 SM00357 Cold shock protein domain VV93_v1c40000 SM00829 Enoylreductase VV93_v1c40040 SM00421 helix_turn_helix, Lux Regulon VV93_v1c40040 SM00448 cheY-homologous receiver domain VV93_v1c40050 SM00387 Histidine kinase-like ATPases VV93_v1c40080 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c40080 SM00267 diguanylate cyclase VV93_v1c40110 SM00357 Cold shock protein domain VV93_v1c40120 SM01322 VV93_v1c40120 VV93_v1c40190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c40190 SM01358 VV93_v1c40190 VV93_v1c40330 SM00852 Probable molybdopterin binding domain VV93_v1c40360 SM00450 Rhodanese Homology Domain VV93_v1c40370 SM00052 Putative diguanylate phosphodiesterase VV93_v1c40370 SM00267 diguanylate cyclase VV93_v1c40380 SM00636 VV93_v1c40380 VV93_v1c40410 SM00861 Transketolase, pyrimidine binding domain VV93_v1c40430 SM00052 Putative diguanylate phosphodiesterase VV93_v1c40430 SM00267 diguanylate cyclase VV93_v1c40430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c40440 SM00091 PAS domain VV93_v1c40440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c40590 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c40630 SM00347 helix_turn_helix multiple antibiotic resistance protein VV93_v1c40680 SM00052 Putative diguanylate phosphodiesterase VV93_v1c40680 SM00267 diguanylate cyclase VV93_v1c40750 SM00052 Putative diguanylate phosphodiesterase VV93_v1c40750 SM00267 diguanylate cyclase VV93_v1c40820 SM01119 VV93_v1c40820 VV93_v1c40850 SM00382 ATPases associated with a variety of cellular activities VV93_v1c40930 SM00347 helix_turn_helix multiple antibiotic resistance protein VV93_v1c40960 SM00487 DEAD-like helicases superfamily VV93_v1c40960 SM00490 helicase superfamily c-terminal domain VV93_v1c41080 SM01022 VV93_v1c41080 VV93_v1c41090 SM01240 VV93_v1c41090 VV93_v1c41130 SM00448 cheY-homologous receiver domain VV93_v1c41150 SM00421 helix_turn_helix, Lux Regulon VV93_v1c41150 SM00448 cheY-homologous receiver domain VV93_v1c41160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c41160 SM00387 Histidine kinase-like ATPases VV93_v1c41190 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VV93_v1c41260 SM01130 VV93_v1c41260 VV93_v1c41370 SM00822 VV93_v1c41370 VV93_v1c41430 SM00344 helix_turn_helix ASNC type VV93_v1c41460 SM00387 Histidine kinase-like ATPases VV93_v1c41460 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c41460 SM00448 cheY-homologous receiver domain VV93_v1c41540 SM00387 Histidine kinase-like ATPases VV93_v1c41540 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c41540 SM00448 cheY-homologous receiver domain VV93_v1c41570 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VV93_v1c41600 SM00788 Adenylosuccinate synthetase VV93_v1c41640 SM00344 helix_turn_helix ASNC type VV93_v1c41670 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c41690 SM00387 Histidine kinase-like ATPases VV93_v1c41690 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c41700 SM00448 cheY-homologous receiver domain VV93_v1c41700 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c41720 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c41750 SM00924 MgtE intracellular N domain VV93_v1c41760 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c41760 SM00871 Bacterial transcription activator, effector binding domain VV93_v1c41810 SM00382 ATPases associated with a variety of cellular activities VV93_v1c41900 SM00327 von Willebrand factor (vWF) type A domain VV93_v1c41900 SM00609 Vault protein Inter-alpha-Trypsin domain VV93_v1c41910 SM00563 Phosphate acyltransferases VV93_v1c41950 SM00849 Metallo-beta-lactamase superfamily VV93_v1c41970 SM00052 Putative diguanylate phosphodiesterase VV93_v1c42010 SM00382 ATPases associated with a variety of cellular activities VV93_v1c42020 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c42060 SM00495 Chitin-binding domain type 3 VV93_v1c42070 SM00052 Putative diguanylate phosphodiesterase VV93_v1c42090 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c42100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c42100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c42110 SM00062 Bacterial periplasmic substrate-binding proteins VV93_v1c42160 SM00823 Phosphopantetheine attachment site VV93_v1c42240 SM00830 Chorismate mutase type II VV93_v1c42320 SM00849 Metallo-beta-lactamase superfamily VV93_v1c42400 SM00382 ATPases associated with a variety of cellular activities VV93_v1c42430 SM00354 helix_turn _helix lactose operon repressor VV93_v1c42500 SM01091 Transporter associated domain VV93_v1c42530 SM00382 ATPases associated with a variety of cellular activities VV93_v1c42540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VV93_v1c42540 SM00091 PAS domain VV93_v1c42540 SM00267 diguanylate cyclase VV93_v1c42690 SM00849 Metallo-beta-lactamase superfamily VV93_v1c42700 SM00028 Tetratricopeptide repeats VV93_v1c42770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VV93_v1c42880 SM00642 Alpha-amylase domain VV93_v1c43090 SM00346 helix_turn_helix isocitrate lyase regulation VV93_v1c43100 SM00116 Domain in cystathionine beta-synthase and other proteins. VV93_v1c43110 SM00479 VV93_v1c43110 VV93_v1c43250 SM00387 Histidine kinase-like ATPases VV93_v1c43250 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c43250 SM00448 cheY-homologous receiver domain VV93_v1c43280 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c43300 SM00422 helix_turn_helix, mercury resistance VV93_v1c43330 SM00448 cheY-homologous receiver domain VV93_v1c43330 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c43340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c43340 SM00387 Histidine kinase-like ATPases VV93_v1c43370 SM00267 diguanylate cyclase VV93_v1c43370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c43390 SM00838 Elongation factor G C-terminus VV93_v1c43390 SM00889 Elongation factor G, domain IV VV93_v1c43470 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c43600 SM00487 DEAD-like helicases superfamily VV93_v1c43600 SM00490 helicase superfamily c-terminal domain VV93_v1c43710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c43710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c43720 SM00073 Histidine Phosphotransfer domain VV93_v1c43720 SM00091 PAS domain VV93_v1c43720 SM00387 Histidine kinase-like ATPases VV93_v1c43720 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c43720 SM00448 cheY-homologous receiver domain VV93_v1c43730 SM00448 cheY-homologous receiver domain VV93_v1c43730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VV93_v1c43780 SM00382 ATPases associated with a variety of cellular activities VV93_v1c43780 SM00448 cheY-homologous receiver domain VV93_v1c43790 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VV93_v1c43790 SM00387 Histidine kinase-like ATPases VV93_v1c43810 SM00849 Metallo-beta-lactamase superfamily VV93_v1c43830 SM00448 cheY-homologous receiver domain VV93_v1c43830 SM00862 Transcriptional regulatory protein, C terminal VV93_v1c43840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c43840 SM00387 Histidine kinase-like ATPases VV93_v1c43840 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c43900 SM00267 diguanylate cyclase VV93_v1c43930 SM00567 E-Z type HEAT repeats VV93_v1c43980 SM00479 VV93_v1c43980 VV93_v1c43990 SM00382 ATPases associated with a variety of cellular activities VV93_v1c44060 SM00382 ATPases associated with a variety of cellular activities VV93_v1c44090 SM00895 VV93_v1c44090 VV93_v1c44210 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c44210 SM01134 VV93_v1c44210 VV93_v1c44220 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c44220 SM01134 VV93_v1c44220 VV93_v1c44230 SM00052 Putative diguanylate phosphodiesterase VV93_v1c44250 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c44280 SM00849 Metallo-beta-lactamase superfamily VV93_v1c44320 SM00671 Sel1-like repeats. VV93_v1c44380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c44420 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c44470 SM00829 Enoylreductase VV93_v1c44480 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c44570 SM00487 DEAD-like helicases superfamily VV93_v1c44570 SM00490 helicase superfamily c-terminal domain VV93_v1c44590 SM00345 helix_turn_helix gluconate operon transcriptional repressor VV93_v1c44590 SM00895 VV93_v1c44590 VV93_v1c44730 SM00420 helix_turn_helix, Deoxyribose operon repressor VV93_v1c44730 SM01134 VV93_v1c44730 VV93_v1c44760 SM01007 Class II Aldolase and Adducin N-terminal domain VV93_v1c44780 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VV93_v1c44820 SM00382 ATPases associated with a variety of cellular activities VV93_v1c44910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c44910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c44920 SM00382 ATPases associated with a variety of cellular activities VV93_v1c45030 SM00344 helix_turn_helix ASNC type VV93_v1c45090 SM00342 helix_turn_helix, arabinose operon control protein VV93_v1c45110 SM00421 helix_turn_helix, Lux Regulon VV93_v1c45130 SM00387 Histidine kinase-like ATPases VV93_v1c45130 SM00388 His Kinase A (phosphoacceptor) domain VV93_v1c45140 SM00448 cheY-homologous receiver domain VV93_v1c45170 SM00052 Putative diguanylate phosphodiesterase VV93_v1c45170 SM00267 diguanylate cyclase VV93_v1c45180 SM00382 ATPases associated with a variety of cellular activities VV93_v1c45220 SM00883 Chaperonin 10 Kd subunit VV93_v1c45230 SM01266 VV93_v1c45230 VV93_v1c45240 SM00028 Tetratricopeptide repeats VV93_v1c45300 SM00052 Putative diguanylate phosphodiesterase VV93_v1c45310 SM00855 Phosphoglycerate mutase family VV93_v1c45400 SM00331 Sigma factor PP2C-like phosphatases VV93_v1c45400 SM00448 cheY-homologous receiver domain VV93_v1c45420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c45430 SM00448 cheY-homologous receiver domain VV93_v1c45450 SM00138 Methyltransferase, chemotaxis proteins VV93_v1c45460 SM00091 PAS domain VV93_v1c45460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VV93_v1c45460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VV93_v1c45470 SM00260 Two component signalling adaptor domain VV93_v1c45480 SM00260 Two component signalling adaptor domain VV93_v1c45490 SM00073 Histidine Phosphotransfer domain VV93_v1c45490 SM00260 Two component signalling adaptor domain VV93_v1c45490 SM00387 Histidine kinase-like ATPases VV93_v1c45490 SM01231 VV93_v1c45490 VV93_v1c45500 SM00448 cheY-homologous receiver domain VV93_v1c45530 SM00470 ParB-like nuclease domain VV93_v1c45610 SM00530 Helix-turn-helix XRE-family like proteins