AL549_00010	PF01553	Acyltransferase
AL549_00025	PF01467	Cytidylyltransferase
AL549_00030	PF02540	NAD synthase
AL549_00035	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_00035	PF00175	Oxidoreductase NAD-binding domain
AL549_00035	PF00970	Oxidoreductase FAD-binding domain
AL549_00035	PF03473	MOSC domain
AL549_00035	PF03476	MOSC N-terminal beta barrel domain
AL549_00040	PF01979	Amidohydrolase family
AL549_00045	PF00990	GGDEF domain
AL549_00050	PF05661	AL549_00050
AL549_00055	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_00060	PF12833	Helix-turn-helix domain
AL549_00065	PF00892	EamA-like transporter family
AL549_00070	PF03061	Thioesterase superfamily
AL549_00080	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_00085	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_00085	PF14785	Maltose transport system permease protein MalF P2 domain
AL549_00090	PF13416	Bacterial extracellular solute-binding protein
AL549_00095	PF00005	ABC transporter
AL549_00095	PF08402	TOBE domain
AL549_00100	PF02397	AL549_00100
AL549_00100	PF13727	CoA-binding domain
AL549_00105	PF10082	AL549_00105
AL549_00110	PF02563	Polysaccharide biosynthesis/export protein
AL549_00110	PF10531	SLBB domain
AL549_00115	PF02706	Chain length determinant protein
AL549_00115	PF13614	AAA domain
AL549_00115	PF13807	AL549_00115
AL549_00120	PF00534	Glycosyl transferases group 1
AL549_00120	PF13439	Glycosyltransferase Family 4
AL549_00125	PF10364	AL549_00125
AL549_00130	PF13439	Glycosyltransferase Family 4
AL549_00130	PF13692	Glycosyl transferases group 1
AL549_00135	PF01943	AL549_00135
AL549_00140	PF04892	AL549_00140
AL549_00145	PF13437	HlyD family secretion protein
AL549_00145	PF13533	Biotin-lipoyl like
AL549_00150	PF00005	ABC transporter
AL549_00155	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL549_00160	PF00196	Bacterial regulatory proteins, luxR family
AL549_00165	PF00196	Bacterial regulatory proteins, luxR family
AL549_00175	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_00175	PF00672	HAMP domain
AL549_00175	PF02743	Cache domain
AL549_00180	PF07726	ATPase family associated with various cellular activities (AAA)
AL549_00185	PF01882	AL549_00185
AL549_00190	PF14316	AL549_00190
AL549_00195	PF00092	von Willebrand factor type A domain
AL549_00200	PF00515	Tetratricopeptide repeat
AL549_00200	PF13519	von Willebrand factor type A domain
AL549_00205	PF13584	AL549_00205
AL549_00210	PF00990	GGDEF domain
AL549_00215	PF00005	ABC transporter
AL549_00220	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_00225	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_00230	PF12849	PBP superfamily domain
AL549_00235	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_00235	PF00672	HAMP domain
AL549_00240	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_00240	PF00672	HAMP domain
AL549_00240	PF02743	Cache domain
AL549_00245	PF07603	AL549_00245
AL549_00250	PF01483	Proprotein convertase P-domain
AL549_00255	PF00593	TonB dependent receptor
AL549_00255	PF07715	TonB-dependent Receptor Plug Domain
AL549_00260	PF00326	Prolyl oligopeptidase family
AL549_00260	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL549_00265	PF00270	DEAD/DEAH box helicase
AL549_00265	PF00271	Helicase conserved C-terminal domain
AL549_00270	PF04728	Lipoprotein leucine-zipper
AL549_00275	PF01476	LysM domain
AL549_00275	PF03734	L,D-transpeptidase catalytic domain
AL549_00280	PF00875	DNA photolyase
AL549_00280	PF03441	FAD binding domain of DNA photolyase
AL549_00285	PF13411	MerR HTH family regulatory protein
AL549_00290	PF04463	AL549_00290
AL549_00290	PF08349	AL549_00290
AL549_00295	PF01048	Phosphorylase superfamily
AL549_00310	PF00990	GGDEF domain
AL549_00315	PF11742	AL549_00315
AL549_00320	PF13533	Biotin-lipoyl like
AL549_00325	PF07155	ECF-type riboflavin transporter, S component
AL549_00330	PF00005	ABC transporter
AL549_00330	PF12558	AL549_00330
AL549_00335	PF02361	Cobalt transport protein
AL549_00340	PF07690	Major Facilitator Superfamily
AL549_00345	PF03572	Peptidase family S41
AL549_00345	PF07676	WD40-like Beta Propeller Repeat
AL549_00345	PF14684	Tricorn protease C1 domain
AL549_00345	PF14685	Tricorn protease PDZ domain
AL549_00350	PF00583	Acetyltransferase (GNAT) family
AL549_00355	PF14542	GCN5-related N-acetyl-transferase
AL549_00360	PF07238	PilZ domain
AL549_00360	PF12945	Flagellar protein YcgR
AL549_00365	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_00365	PF00672	HAMP domain
AL549_00375	PF00924	Mechanosensitive ion channel
AL549_00380	PF00194	Eukaryotic-type carbonic anhydrase
AL549_00385	PF12849	PBP superfamily domain
AL549_00390	PF00691	OmpA family
AL549_00395	PF02321	Outer membrane efflux protein
AL549_00400	PF13437	HlyD family secretion protein
AL549_00400	PF13533	Biotin-lipoyl like
AL549_00405	PF00005	ABC transporter
AL549_00405	PF00664	ABC transporter transmembrane region
AL549_00410	PF12245	Bacterial Ig-like domain (group 3)
AL549_00415	PF04076	Bacterial OB fold (BOF) protein
AL549_00420	PF00072	Response regulator receiver domain
AL549_00420	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_00420	PF00512	His Kinase A (phospho-acceptor) domain
AL549_00420	PF01627	Hpt domain
AL549_00420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_00425	PF00072	Response regulator receiver domain
AL549_00425	PF00563	EAL domain
AL549_00430	PF00072	Response regulator receiver domain
AL549_00430	PF00196	Bacterial regulatory proteins, luxR family
AL549_00435	PF00990	GGDEF domain
AL549_00440	PF00072	Response regulator receiver domain
AL549_00440	PF00196	Bacterial regulatory proteins, luxR family
AL549_00450	PF13450	NAD(P)-binding Rossmann-like domain
AL549_00460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00460	PF03466	LysR substrate binding domain
AL549_00465	PF00753	Metallo-beta-lactamase superfamily
AL549_00470	PF06629	AL549_00470
AL549_00475	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
AL549_00480	PF08212	Lipocalin-like domain
AL549_00500	PF05016	Plasmid stabilisation system protein
AL549_00505	PF04221	RelB antitoxin
AL549_00525	PF04664	AL549_00525
AL549_00530	PF00107	Zinc-binding dehydrogenase
AL549_00530	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_00535	PF00155	Aminotransferase class I and II
AL549_00540	PF00657	GDSL-like Lipase/Acylhydrolase
AL549_00545	PF00082	Subtilase family
AL549_00545	PF01483	Proprotein convertase P-domain
AL549_00545	PF05922	Peptidase inhibitor I9
AL549_00555	PF07690	Major Facilitator Superfamily
AL549_00560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00560	PF03466	LysR substrate binding domain
AL549_00565	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_00570	PF03929	AL549_00570
AL549_00580	PF00199	Catalase
AL549_00580	PF06628	Catalase-related immune-responsive
AL549_00585	PF12796	Ankyrin repeats (3 copies)
AL549_00590	PF00080	Copper/zinc superoxide dismutase (SODC)
AL549_00595	PF07361	Cytochrome b562
AL549_00605	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
AL549_00610	PF02743	Cache domain
AL549_00610	PF13487	HD domain
AL549_00615	PF00892	EamA-like transporter family
AL549_00620	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00620	PF03466	LysR substrate binding domain
AL549_00625	PF01906	Putative heavy-metal-binding
AL549_00630	PF11301	AL549_00630
AL549_00635	PF00990	GGDEF domain
AL549_00635	PF13426	PAS domain
AL549_00635	PF17152	AL549_00635
AL549_00640	PF13689	AL549_00640
AL549_00645	PF00593	TonB dependent receptor
AL549_00645	PF07715	TonB-dependent Receptor Plug Domain
AL549_00650	PF13416	Bacterial extracellular solute-binding protein
AL549_00655	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL549_00655	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL549_00660	PF00892	EamA-like transporter family
AL549_00665	PF03734	L,D-transpeptidase catalytic domain
AL549_00670	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_00675	PF07690	Major Facilitator Superfamily
AL549_00680	PF12833	Helix-turn-helix domain
AL549_00685	PF10928	Protein of unknown function (DUF2810)
AL549_00730	PF11286	AL549_00730
AL549_00735	PF04013	Putative SAM-dependent RNA methyltransferase
AL549_00740	PF08543	Phosphomethylpyrimidine kinase
AL549_00745	PF01569	PAP2 superfamily
AL549_00750	PF00440	Bacterial regulatory proteins, tetR family
AL549_00760	PF08282	haloacid dehalogenase-like hydrolase
AL549_00765	PF00857	Isochorismatase family
AL549_00770	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL549_00775	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_00780	PF01323	DSBA-like thioredoxin domain
AL549_00800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00800	PF03466	LysR substrate binding domain
AL549_00805	PF00106	short chain dehydrogenase
AL549_00810	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00810	PF03466	LysR substrate binding domain
AL549_00815	PF13460	NADH(P)-binding
AL549_00820	PF00072	Response regulator receiver domain
AL549_00820	PF00486	Transcriptional regulatory protein, C terminal
AL549_00825	PF00512	His Kinase A (phospho-acceptor) domain
AL549_00825	PF00672	HAMP domain
AL549_00825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_00830	PF01219	Prokaryotic diacylglycerol kinase
AL549_00835	PF00884	Sulfatase
AL549_00835	PF08019	AL549_00835
AL549_00840	PF00884	Sulfatase
AL549_00845	PF03733	AL549_00845
AL549_00850	PF00128	Alpha amylase, catalytic domain
AL549_00855	PF02018	Carbohydrate binding domain
AL549_00855	PF04231	Endonuclease I
AL549_00860	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_00870	PF00990	GGDEF domain
AL549_00870	PF01590	GAF domain
AL549_00875	PF00892	EamA-like transporter family
AL549_00880	PF00155	Aminotransferase class I and II
AL549_00880	PF00392	Bacterial regulatory proteins, gntR family
AL549_00885	PF01432	Peptidase family M3
AL549_00905	PF00196	Bacterial regulatory proteins, luxR family
AL549_00910	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AL549_00915	PF05958	tRNA (Uracil-5-)-methyltransferase
AL549_00920	PF00881	Nitroreductase family
AL549_00925	PF00753	Metallo-beta-lactamase superfamily
AL549_00930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00930	PF03466	LysR substrate binding domain
AL549_00940	PF00440	Bacterial regulatory proteins, tetR family
AL549_00940	PF14246	AefR-like transcriptional repressor, C-terminal region
AL549_00950	PF01103	Surface antigen
AL549_00955	PF13265	AL549_00955
AL549_00960	PF00375	Sodium:dicarboxylate symporter family
AL549_00965	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00965	PF03466	LysR substrate binding domain
AL549_00970	PF00764	Arginosuccinate synthase
AL549_00975	PF10014	2OG-Fe dioxygenase
AL549_00980	PF00892	EamA-like transporter family
AL549_00985	PF14534	Domain of unknown function (DUF4440)
AL549_00990	PF01638	HxlR-like helix-turn-helix
AL549_00995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_00995	PF03466	LysR substrate binding domain
AL549_01005	PF00027	Cyclic nucleotide-binding domain
AL549_01010	PF00313	'Cold-shock' DNA-binding domain
AL549_01010	PF06961	AL549_01010
AL549_01015	PF01048	Phosphorylase superfamily
AL549_01020	PF04973	AL549_01020
AL549_01030	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_01030	PF12793	AL549_01030
AL549_01035	PF07690	Major Facilitator Superfamily
AL549_01040	PF04247	AL549_01040
AL549_01045	PF01752	Collagenase
AL549_01045	PF04151	Bacterial pre-peptidase C-terminal domain
AL549_01045	PF08453	Peptidase family M9 N-terminal
AL549_01050	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_01050	PF03466	LysR substrate binding domain
AL549_01055	PF01048	Phosphorylase superfamily
AL549_01060	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_01065	PF00703	Glycosyl hydrolases family 2
AL549_01070	PF00384	Molybdopterin oxidoreductase
AL549_01070	PF01568	Molydopterin dinucleotide binding domain
AL549_01070	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_01070	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_01070	PF12838	4Fe-4S dicluster domain
AL549_01070	PF13510	2Fe-2S iron-sulfur cluster binding domain
AL549_01070	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL549_01080	PF12710	haloacid dehalogenase-like hydrolase
AL549_01085	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_01090	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_01095	PF00892	EamA-like transporter family
AL549_01100	PF00155	Aminotransferase class I and II
AL549_01100	PF00392	Bacterial regulatory proteins, gntR family
AL549_01110	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_01110	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_01110	PF02378	Phosphotransferase system, EIIC
AL549_01115	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_01120	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_01120	PF00381	PTS HPr component phosphorylation site
AL549_01125	PF12833	Helix-turn-helix domain
AL549_01130	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_01130	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_01130	PF02378	Phosphotransferase system, EIIC
AL549_01135	PF01238	Phosphomannose isomerase type I
AL549_01150	PF09313	Domain of unknown function (DUF1971)
AL549_01155	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_01160	PF00258	Flavodoxin
AL549_01160	PF00301	Rubredoxin
AL549_01160	PF00753	Metallo-beta-lactamase superfamily
AL549_01165	PF00158	Sigma-54 interaction domain
AL549_01165	PF01590	GAF domain
AL549_01185	PF06445	GyrI-like small molecule binding domain
AL549_01185	PF12833	Helix-turn-helix domain
AL549_01190	PF00593	TonB dependent receptor
AL549_01190	PF07715	TonB-dependent Receptor Plug Domain
AL549_01195	PF01593	Flavin containing amine oxidoreductase
AL549_01200	PF11953	Domain of unknown function (DUF3470)
AL549_01200	PF13187	4Fe-4S dicluster domain
AL549_01205	PF00588	SpoU rRNA Methylase family
AL549_01215	PF13347	MFS/sugar transport protein
AL549_01220	PF02065	Melibiase
AL549_01220	PF16874	AL549_01220
AL549_01220	PF16875	AL549_01220
AL549_01225	PF00703	Glycosyl hydrolases family 2
AL549_01225	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AL549_01225	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AL549_01225	PF02929	Beta galactosidase small chain
AL549_01225	PF16353	AL549_01225
AL549_01230	PF13407	Periplasmic binding protein domain
AL549_01235	PF00005	ABC transporter
AL549_01240	PF02653	AL549_01240
AL549_01245	PF00356	Bacterial regulatory proteins, lacI family
AL549_01245	PF13377	Periplasmic binding protein-like domain
AL549_01250	PF00440	Bacterial regulatory proteins, tetR family
AL549_01260	PF00873	AcrB/AcrD/AcrF family
AL549_01265	PF00990	GGDEF domain
AL549_01265	PF01590	GAF domain
AL549_01270	PF00849	RNA pseudouridylate synthase
AL549_01280	PF13289	AL549_01280
AL549_01290	PF13673	Acetyltransferase (GNAT) domain
AL549_01295	PF08681	Protein of unknown function (DUF1778)
AL549_01300	PF11168	AL549_01300
AL549_01305	PF00529	HlyD family secretion protein
AL549_01305	PF16576	AL549_01305
AL549_01315	PF01554	MatE
AL549_01320	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL549_01320	PF01915	Glycosyl hydrolase family 3 C-terminal domain
AL549_01320	PF14310	Fibronectin type III-like domain
AL549_01325	PF02311	AraC-like ligand binding domain
AL549_01325	PF12833	Helix-turn-helix domain
AL549_01330	PF02264	LamB porin
AL549_01335	PF00722	Glycosyl hydrolases family 16
AL549_01345	PF00356	Bacterial regulatory proteins, lacI family
AL549_01345	PF13377	Periplasmic binding protein-like domain
AL549_01355	PF00005	ABC transporter
AL549_01355	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_01360	PF00005	ABC transporter
AL549_01360	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_01365	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_01370	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_01375	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_01380	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_01385	PF00356	Bacterial regulatory proteins, lacI family
AL549_01385	PF13377	Periplasmic binding protein-like domain
AL549_01390	PF00005	ABC transporter
AL549_01395	PF00232	Glycosyl hydrolase family 1
AL549_01400	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_01405	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_01410	PF13416	Bacterial extracellular solute-binding protein
AL549_01415	PF00356	Bacterial regulatory proteins, lacI family
AL549_01415	PF13377	Periplasmic binding protein-like domain
AL549_01420	PF02264	LamB porin
AL549_01430	PF00174	Oxidoreductase molybdopterin binding domain
AL549_01435	PF00990	GGDEF domain
AL549_01440	PF00072	Response regulator receiver domain
AL549_01440	PF00486	Transcriptional regulatory protein, C terminal
AL549_01445	PF00512	His Kinase A (phospho-acceptor) domain
AL549_01445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_01445	PF08521	AL549_01445
AL549_01450	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_01455	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_01455	PF03466	LysR substrate binding domain
AL549_01460	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_01465	PF00675	Insulinase (Peptidase family M16)
AL549_01465	PF05193	Peptidase M16 inactive domain
AL549_01470	PF02690	AL549_01470
AL549_01475	PF01966	HD domain
AL549_01480	PF02798	Glutathione S-transferase, N-terminal domain
AL549_01480	PF13410	Glutathione S-transferase, C-terminal domain
AL549_01485	PF00171	Aldehyde dehydrogenase family
AL549_01490	PF00563	EAL domain
AL549_01500	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_01500	PF00672	HAMP domain
AL549_01505	PF12710	haloacid dehalogenase-like hydrolase
AL549_01510	PF13505	Outer membrane protein beta-barrel domain
AL549_01515	PF03067	Chitin binding domain
AL549_01520	PF01470	Pyroglutamyl peptidase
AL549_01530	PF01037	AsnC family
AL549_01530	PF13412	Winged helix-turn-helix DNA-binding
AL549_01535	PF01810	AL549_01535
AL549_01540	PF00919	Uncharacterized protein family UPF0004
AL549_01540	PF04055	Radical SAM superfamily
AL549_01545	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_01550	PF00128	Alpha amylase, catalytic domain
AL549_01550	PF02806	Alpha amylase, C-terminal all-beta domain
AL549_01550	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL549_01555	PF02446	4-alpha-glucanotransferase
AL549_01560	PF00343	Carbohydrate phosphorylase
AL549_01565	PF00196	Bacterial regulatory proteins, luxR family
AL549_01570	PF04018	AL549_01570
AL549_01580	PF02630	SCO1/SenC
AL549_01585	PF04314	Protein of unknown function (DUF461)
AL549_01590	PF03193	Protein of unknown function, DUF258
AL549_01595	PF00375	Sodium:dicarboxylate symporter family
AL549_01600	PF08543	Phosphomethylpyrimidine kinase
AL549_01605	PF13520	Amino acid permease
AL549_01610	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL549_01610	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL549_01610	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL549_01625	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL549_01625	PF03714	Bacterial pullanase-associated domain
AL549_01625	PF11852	Domain of unknown function (DUF3372)
AL549_01630	PF08238	Sel1 repeat
AL549_01635	PF00128	Alpha amylase, catalytic domain
AL549_01640	PF13416	Bacterial extracellular solute-binding protein
AL549_01645	PF06202	Amylo-alpha-1,6-glucosidase
AL549_01650	PF07148	AL549_01650
AL549_01655	PF02264	LamB porin
AL549_01660	PF00128	Alpha amylase, catalytic domain
AL549_01660	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL549_01665	PF00990	GGDEF domain
AL549_01665	PF17201	AL549_01665
AL549_01670	PF00990	GGDEF domain
AL549_01680	PF02678	Pirin
AL549_01680	PF05726	Pirin C-terminal cupin domain
AL549_01685	PF06865	Protein of unknown function (DUF1255)
AL549_01690	PF11012	AL549_01690
AL549_01695	PF00704	Glycosyl hydrolases family 18
AL549_01695	PF02010	AL549_01695
AL549_01695	PF08329	Chitinase A, N-terminal domain
AL549_01700	PF08386	TAP-like protein
AL549_01700	PF12146	Putative lysophospholipase
AL549_01705	PF00440	Bacterial regulatory proteins, tetR family
AL549_01710	PF01757	AL549_01710
AL549_01715	PF03600	Citrate transporter
AL549_01720	PF04994	TfoX C-terminal domain
AL549_01725	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL549_01730	PF02588	AL549_01730
AL549_01735	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL549_01735	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL549_01740	PF02805	Metal binding domain of Ada
AL549_01740	PF06029	AlkA N-terminal domain
AL549_01740	PF12833	Helix-turn-helix domain
AL549_01750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_01750	PF03466	LysR substrate binding domain
AL549_01755	PF04219	AL549_01755
AL549_01760	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL549_01760	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL549_01765	PF05013	N-formylglutamate amidohydrolase
AL549_01765	PF08014	AL549_01765
AL549_01770	PF11280	AL549_01770
AL549_01775	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL549_01785	PF03616	AL549_01785
AL549_01790	PF03616	AL549_01790
AL549_01795	PF14247	AL549_01795
AL549_01800	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_01800	PF17200	AL549_01800
AL549_01805	PF00072	Response regulator receiver domain
AL549_01805	PF04397	LytTr DNA-binding domain
AL549_01810	PF06580	AL549_01810
AL549_01820	PF17131	AL549_01820
AL549_01825	PF02687	AL549_01825
AL549_01825	PF12704	MacB-like periplasmic core domain
AL549_01830	PF00005	ABC transporter
AL549_01840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_01840	PF03466	LysR substrate binding domain
AL549_01845	PF11391	AL549_01845
AL549_01850	PF01709	Transcriptional regulator
AL549_01855	PF11686	AL549_01855
AL549_01860	PF00072	Response regulator receiver domain
AL549_01860	PF00512	His Kinase A (phospho-acceptor) domain
AL549_01860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_01860	PF17149	AL549_01860
AL549_01865	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_01870	PF01609	Transposase DDE domain
AL549_01870	PF13006	AL549_01870
AL549_01885	PF00005	ABC transporter
AL549_01890	PF00005	ABC transporter
AL549_01890	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_01900	PF11826	AL549_01900
AL549_01905	PF13614	AAA domain
AL549_01910	PF02195	ParB-like nuclease domain
AL549_01915	PF05127	Helicase
AL549_01915	PF08351	Domain of unknown function (DUF1726)
AL549_01915	PF13718	GNAT acetyltransferase 2
AL549_01920	PF13466	STAS domain
AL549_01925	PF00072	Response regulator receiver domain
AL549_01930	PF01584	CheW-like domain
AL549_01930	PF01627	Hpt domain
AL549_01930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_01930	PF02895	Signal transducing histidine kinase, homodimeric domain
AL549_01935	PF01584	CheW-like domain
AL549_01940	PF01584	CheW-like domain
AL549_01945	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_01945	PF13188	PAS domain
AL549_01945	PF13426	PAS domain
AL549_01950	PF01739	CheR methyltransferase, SAM binding domain
AL549_01950	PF03705	CheR methyltransferase, all-alpha domain
AL549_01955	PF03975	CheD chemotactic sensory transduction
AL549_01960	PF00072	Response regulator receiver domain
AL549_01960	PF01339	CheB methylesterase
AL549_01965	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_01970	PF01740	STAS domain
AL549_01975	PF00072	Response regulator receiver domain
AL549_01975	PF07228	Stage II sporulation protein E (SpoIIE)
AL549_01975	PF13581	Histidine kinase-like ATPase domain
AL549_01980	PF03961	AL549_01980
AL549_01985	PF12796	Ankyrin repeats (3 copies)
AL549_01990	PF13353	4Fe-4S single cluster domain
AL549_01995	PF02223	Thymidylate kinase
AL549_02000	PF07308	AL549_02000
AL549_02005	PF06674	AL549_02005
AL549_02010	PF01039	Carboxyl transferase domain
AL549_02015	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02015	PF03466	LysR substrate binding domain
AL549_02020	PF01752	Collagenase
AL549_02020	PF04151	Bacterial pre-peptidase C-terminal domain
AL549_02020	PF08453	Peptidase family M9 N-terminal
AL549_02025	PF00300	Histidine phosphatase superfamily (branch 1)
AL549_02030	PF00563	EAL domain
AL549_02040	PF00367	phosphotransferase system, EIIB
AL549_02040	PF02378	Phosphotransferase system, EIIC
AL549_02045	PF13580	SIS domain
AL549_02050	PF01380	SIS domain
AL549_02050	PF01418	Helix-turn-helix domain, rpiR family
AL549_02055	PF01189	NOL1/NOP2/sun family
AL549_02060	PF02698	DUF218 domain
AL549_02065	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_02065	PF12464	Maltose acetyltransferase
AL549_02070	PF00166	Chaperonin 10 Kd subunit
AL549_02075	PF00118	TCP-1/cpn60 chaperonin family
AL549_02085	PF03358	NADPH-dependent FMN reductase
AL549_02090	PF00005	ABC transporter
AL549_02090	PF00664	ABC transporter transmembrane region
AL549_02095	PF00563	EAL domain
AL549_02095	PF00990	GGDEF domain
AL549_02095	PF16448	AL549_02095
AL549_02100	PF06035	Bacterial transglutaminase-like cysteine proteinase BTLCP
AL549_02105	PF13437	HlyD family secretion protein
AL549_02105	PF13533	Biotin-lipoyl like
AL549_02110	PF00072	Response regulator receiver domain
AL549_02110	PF02954	Bacterial regulatory protein, Fis family
AL549_02110	PF14532	Sigma-54 interaction domain
AL549_02115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_02115	PF02743	Cache domain
AL549_02120	PF01243	Pyridoxamine 5'-phosphate oxidase
AL549_02120	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL549_02125	PF00196	Bacterial regulatory proteins, luxR family
AL549_02125	PF08448	PAS fold
AL549_02130	PF12833	Helix-turn-helix domain
AL549_02135	PF00171	Aldehyde dehydrogenase family
AL549_02135	PF01619	Proline dehydrogenase
AL549_02135	PF14850	DNA-binding domain of Proline dehydrogenase
AL549_02145	PF00474	Sodium:solute symporter family
AL549_02150	PF01037	AsnC family
AL549_02150	PF13412	Winged helix-turn-helix DNA-binding
AL549_02155	PF04286	AL549_02155
AL549_02160	PF02278	Polysaccharide lyase family 8, super-sandwich domain
AL549_02160	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
AL549_02160	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
AL549_02165	PF00884	Sulfatase
AL549_02165	PF16385	AL549_02165
AL549_02170	PF00884	Sulfatase
AL549_02175	PF04055	Radical SAM superfamily
AL549_02175	PF13186	Iron-sulfur cluster-binding domain
AL549_02180	PF00884	Sulfatase
AL549_02180	PF16347	AL549_02180
AL549_02185	PF10022	AL549_02185
AL549_02190	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_02195	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_02200	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_02200	PF12911	AL549_02200
AL549_02205	PF00005	ABC transporter
AL549_02205	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_02210	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_02215	PF04982	AL549_02215
AL549_02220	PF03573	outer membrane porin, OprD family
AL549_02225	PF00916	AL549_02225
AL549_02230	PF16363	AL549_02230
AL549_02235	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL549_02235	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL549_02240	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_02245	PF07470	Glycosyl Hydrolase Family 88
AL549_02250	PF09508	Lacto-N-biose phosphorylase
AL549_02250	PF17385	AL549_02250
AL549_02250	PF17386	AL549_02250
AL549_02255	PF02278	Polysaccharide lyase family 8, super-sandwich domain
AL549_02255	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
AL549_02260	PF00005	ABC transporter
AL549_02260	PF00664	ABC transporter transmembrane region
AL549_02265	PF02274	Amidinotransferase
AL549_02275	PF01261	Xylose isomerase-like TIM barrel
AL549_02280	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL549_02285	PF08282	haloacid dehalogenase-like hydrolase
AL549_02290	PF00596	Class II Aldolase and Adducin N-terminal domain
AL549_02295	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_02300	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_02300	PF03611	AL549_02300
AL549_02305	PF00455	AL549_02305
AL549_02305	PF08220	DeoR-like helix-turn-helix domain
AL549_02310	PF13483	Beta-lactamase superfamily domain
AL549_02315	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL549_02320	PF04399	Glutaredoxin 2, C terminal domain
AL549_02320	PF13417	Glutathione S-transferase, N-terminal domain
AL549_02325	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_02330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02330	PF03466	LysR substrate binding domain
AL549_02335	PF10688	AL549_02335
AL549_02340	PF01081	KDPG and KHG aldolase
AL549_02345	PF00294	pfkB family carbohydrate kinase
AL549_02350	PF02614	Glucuronate isomerase
AL549_02355	PF01232	Mannitol dehydrogenase Rossmann domain
AL549_02355	PF08125	Mannitol dehydrogenase C-terminal domain
AL549_02360	PF06808	AL549_02360
AL549_02365	PF04290	AL549_02365
AL549_02370	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_02375	PF00392	Bacterial regulatory proteins, gntR family
AL549_02375	PF07729	FCD domain
AL549_02380	PF03786	D-mannonate dehydratase (UxuA)
AL549_02385	PF00270	DEAD/DEAH box helicase
AL549_02385	PF00271	Helicase conserved C-terminal domain
AL549_02390	PF00155	Aminotransferase class I and II
AL549_02395	PF03553	AL549_02395
AL549_02400	PF00356	Bacterial regulatory proteins, lacI family
AL549_02400	PF13377	Periplasmic binding protein-like domain
AL549_02405	PF00857	Isochorismatase family
AL549_02410	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL549_02415	PF00501	AMP-binding enzyme
AL549_02415	PF00892	EamA-like transporter family
AL549_02420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02420	PF03466	LysR substrate binding domain
AL549_02425	PF03473	MOSC domain
AL549_02425	PF03475	3-alpha domain
AL549_02435	PF12833	Helix-turn-helix domain
AL549_02440	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_02445	PF02056	Family 4 glycosyl hydrolase
AL549_02445	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL549_02450	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02450	PF03466	LysR substrate binding domain
AL549_02465	PF12833	Helix-turn-helix domain
AL549_02465	PF12852	Cupin
AL549_02470	PF00462	Glutaredoxin
AL549_02475	PF04224	AL549_02475
AL549_02485	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_02485	PF12729	AL549_02485
AL549_02490	PF01547	Bacterial extracellular solute-binding protein
AL549_02495	PF11212	AL549_02495
AL549_02500	PF11730	AL549_02500
AL549_02505	PF01625	Peptide methionine sulfoxide reductase
AL549_02510	PF01641	SelR domain
AL549_02515	PF08238	Sel1 repeat
AL549_02520	PF06055	AL549_02520
AL549_02525	PF01872	RibD C-terminal domain
AL549_02530	PF13508	Acetyltransferase (GNAT) domain
AL549_02535	PF00753	Metallo-beta-lactamase superfamily
AL549_02535	PF14863	Alkyl sulfatase dimerisation
AL549_02535	PF14864	Alkyl sulfatase C-terminal
AL549_02540	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02540	PF03466	LysR substrate binding domain
AL549_02545	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL549_02545	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL549_02550	PF12833	Helix-turn-helix domain
AL549_02555	PF00892	EamA-like transporter family
AL549_02560	PF00455	AL549_02560
AL549_02560	PF08220	DeoR-like helix-turn-helix domain
AL549_02565	PF00455	AL549_02565
AL549_02565	PF08220	DeoR-like helix-turn-helix domain
AL549_02570	PF08013	Tagatose 6 phosphate kinase
AL549_02575	PF01380	SIS domain
AL549_02580	PF03830	PTS system sorbose subfamily IIB component
AL549_02585	PF03609	AL549_02585
AL549_02590	PF03613	AL549_02590
AL549_02595	PF03610	PTS system fructose IIA component
AL549_02600	PF01979	Amidohydrolase family
AL549_02605	PF01116	Fructose-bisphosphate aldolase class-II
AL549_02610	PF00005	ABC transporter
AL549_02610	PF12848	ABC transporter
AL549_02615	PF00593	TonB dependent receptor
AL549_02615	PF07715	TonB-dependent Receptor Plug Domain
AL549_02620	PF00392	Bacterial regulatory proteins, gntR family
AL549_02620	PF07729	FCD domain
AL549_02625	PF01032	FecCD transport family
AL549_02630	PF01497	Periplasmic binding protein
AL549_02635	PF00005	ABC transporter
AL549_02640	PF11575	AL549_02640
AL549_02650	PF16576	AL549_02650
AL549_02655	PF02321	Outer membrane efflux protein
AL549_02660	PF02687	AL549_02660
AL549_02660	PF12704	MacB-like periplasmic core domain
AL549_02665	PF02687	AL549_02665
AL549_02665	PF12704	MacB-like periplasmic core domain
AL549_02670	PF00005	ABC transporter
AL549_02675	PF00929	Exonuclease
AL549_02680	PF07690	Major Facilitator Superfamily
AL549_02690	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
AL549_02695	PF00990	GGDEF domain
AL549_02700	PF01389	OmpA-like transmembrane domain
AL549_02705	PF08908	AL549_02705
AL549_02710	PF01717	Cobalamin-independent synthase, Catalytic domain
AL549_02715	PF11168	AL549_02715
AL549_02715	PF13515	AL549_02715
AL549_02720	PF13437	HlyD family secretion protein
AL549_02720	PF13533	Biotin-lipoyl like
AL549_02725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02725	PF03466	LysR substrate binding domain
AL549_02730	PF00512	His Kinase A (phospho-acceptor) domain
AL549_02730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_02735	PF00072	Response regulator receiver domain
AL549_02735	PF00486	Transcriptional regulatory protein, C terminal
AL549_02740	PF11777	AL549_02740
AL549_02745	PF00753	Metallo-beta-lactamase superfamily
AL549_02745	PF14863	Alkyl sulfatase dimerisation
AL549_02745	PF14864	Alkyl sulfatase C-terminal
AL549_02755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_02755	PF13426	PAS domain
AL549_02760	PF00072	Response regulator receiver domain
AL549_02760	PF00158	Sigma-54 interaction domain
AL549_02760	PF02954	Bacterial regulatory protein, Fis family
AL549_02765	PF16868	AL549_02765
AL549_02770	PF06808	AL549_02770
AL549_02775	PF01266	FAD dependent oxidoreductase
AL549_02780	PF11777	AL549_02780
AL549_02785	PF00072	Response regulator receiver domain
AL549_02785	PF13487	HD domain
AL549_02790	PF00072	Response regulator receiver domain
AL549_02790	PF00512	His Kinase A (phospho-acceptor) domain
AL549_02790	PF00989	PAS fold
AL549_02790	PF01627	Hpt domain
AL549_02790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_02795	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_02800	PF07883	Cupin domain
AL549_02805	PF00805	Pentapeptide repeats (8 copies)
AL549_02805	PF13599	Pentapeptide repeats (9 copies)
AL549_02810	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AL549_02815	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_02815	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_02820	PF01447	Thermolysin metallopeptidase, catalytic domain
AL549_02820	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL549_02820	PF03413	Peptidase propeptide and YPEB domain
AL549_02820	PF04151	Bacterial pre-peptidase C-terminal domain
AL549_02820	PF07504	Fungalysin/Thermolysin Propeptide Motif
AL549_02825	PF06041	Bacterial protein of unknown function (DUF924)
AL549_02830	PF01841	Transglutaminase-like superfamily
AL549_02840	PF12697	Alpha/beta hydrolase family
AL549_02850	PF00270	DEAD/DEAH box helicase
AL549_02850	PF00271	Helicase conserved C-terminal domain
AL549_02855	PF00561	alpha/beta hydrolase fold
AL549_02860	PF00881	Nitroreductase family
AL549_02865	PF03992	Antibiotic biosynthesis monooxygenase
AL549_02870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02870	PF03466	LysR substrate binding domain
AL549_02875	PF13279	Thioesterase-like superfamily
AL549_02880	PF00175	Oxidoreductase NAD-binding domain
AL549_02880	PF00970	Oxidoreductase FAD-binding domain
AL549_02885	PF00892	EamA-like transporter family
AL549_02890	PF09829	AL549_02890
AL549_02895	PF10973	AL549_02895
AL549_02900	PF00892	EamA-like transporter family
AL549_02905	PF01757	AL549_02905
AL549_02910	PF07690	Major Facilitator Superfamily
AL549_02915	PF02311	AraC-like ligand binding domain
AL549_02915	PF12833	Helix-turn-helix domain
AL549_02930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_02930	PF03466	LysR substrate binding domain
AL549_02935	PF07519	Tannase and feruloyl esterase
AL549_02945	PF06942	AL549_02945
AL549_02950	PF00034	Cytochrome c
AL549_02950	PF03150	Di-haem cytochrome c peroxidase
AL549_02960	PF02001	AL549_02960
AL549_02965	PF02579	Dinitrogenase iron-molybdenum cofactor
AL549_02970	PF04400	AL549_02970
AL549_02975	PF00009	Elongation factor Tu GTP binding domain
AL549_02975	PF00679	Elongation factor G C-terminus
AL549_02975	PF03764	Elongation factor G, domain IV
AL549_02975	PF14492	Elongation Factor G, domain II
AL549_02980	PF00583	Acetyltransferase (GNAT) family
AL549_02985	PF00990	GGDEF domain
AL549_02990	PF13458	Periplasmic binding protein
AL549_02995	PF13416	Bacterial extracellular solute-binding protein
AL549_03000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_03005	PF00072	Response regulator receiver domain
AL549_03005	PF00486	Transcriptional regulatory protein, C terminal
AL549_03010	PF00367	phosphotransferase system, EIIB
AL549_03010	PF02378	Phosphotransferase system, EIIC
AL549_03015	PF07690	Major Facilitator Superfamily
AL549_03020	PF13411	MerR HTH family regulatory protein
AL549_03025	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
AL549_03030	PF12833	Helix-turn-helix domain
AL549_03035	PF01161	Phosphatidylethanolamine-binding protein
AL549_03040	PF00293	NUDIX domain
AL549_03045	PF00072	Response regulator receiver domain
AL549_03045	PF00512	His Kinase A (phospho-acceptor) domain
AL549_03045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_03050	PF00174	Oxidoreductase molybdopterin binding domain
AL549_03055	PF16576	AL549_03055
AL549_03060	PF00873	AcrB/AcrD/AcrF family
AL549_03070	PF00924	Mechanosensitive ion channel
AL549_03075	PF00583	Acetyltransferase (GNAT) family
AL549_03080	PF13449	Esterase-like activity of phytase
AL549_03085	PF00924	Mechanosensitive ion channel
AL549_03090	PF00583	Acetyltransferase (GNAT) family
AL549_03090	PF00795	Carbon-nitrogen hydrolase
AL549_03095	PF10000	ACT domain
AL549_03095	PF13840	ACT domain
AL549_03100	PF11840	AL549_03100
AL549_03105	PF00929	Exonuclease
AL549_03110	PF00571	CBS domain
AL549_03110	PF03445	AL549_03110
AL549_03110	PF10335	AL549_03110
AL549_03115	PF01614	Bacterial transcriptional regulator
AL549_03115	PF09339	IclR helix-turn-helix domain
AL549_03120	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_03125	PF10688	AL549_03125
AL549_03130	PF07883	Cupin domain
AL549_03135	PF02502	Ribose/Galactose Isomerase
AL549_03135	PF12408	Ribose-5-phosphate isomerase
AL549_03150	PF00892	EamA-like transporter family
AL549_03155	PF00294	pfkB family carbohydrate kinase
AL549_03160	PF01081	KDPG and KHG aldolase
AL549_03165	PF00754	F5/8 type C domain
AL549_03170	PF06917	Periplasmic pectate lyase
AL549_03175	PF00474	Sodium:solute symporter family
AL549_03180	PF06178	Oligogalacturonate-specific porin protein (KdgM)
AL549_03190	PF00474	Sodium:solute symporter family
AL549_03195	PF14583	Oligogalacturonate lyase
AL549_03200	PF00128	Alpha amylase, catalytic domain
AL549_03205	PF03625	Domain of unknown function DUF302
AL549_03210	PF07670	Nucleoside recognition
AL549_03215	PF07670	Nucleoside recognition
AL549_03220	PF01546	Peptidase family M20/M25/M40
AL549_03220	PF07687	Peptidase dimerisation domain
AL549_03230	PF06863	Protein of unknown function (DUF1254)
AL549_03240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_03240	PF03466	LysR substrate binding domain
AL549_03245	PF06742	Protein of unknown function (DUF1214)
AL549_03245	PF06863	Protein of unknown function (DUF1254)
AL549_03250	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_03255	PF01022	Bacterial regulatory protein, arsR family
AL549_03260	PF01758	Sodium Bile acid symporter family
AL549_03265	PF01230	HIT domain
AL549_03270	PF13670	AL549_03270
AL549_03275	PF01292	Prokaryotic cytochrome b561
AL549_03280	PF00884	Sulfatase
AL549_03280	PF08019	AL549_03280
AL549_03285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_03285	PF03466	LysR substrate binding domain
AL549_03290	PF12688	Tetratrico peptide repeat
AL549_03295	PF00753	Metallo-beta-lactamase superfamily
AL549_03295	PF14863	Alkyl sulfatase dimerisation
AL549_03295	PF14864	Alkyl sulfatase C-terminal
AL549_03305	PF16576	AL549_03305
AL549_03310	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_03315	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_03320	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL549_03320	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL549_03325	PF00579	tRNA synthetases class I (W and Y)
AL549_03325	PF01479	S4 domain
AL549_03330	PF00196	Bacterial regulatory proteins, luxR family
AL549_03335	PF02567	Phenazine biosynthesis-like protein
AL549_03340	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_03340	PF03466	LysR substrate binding domain
AL549_03345	PF02798	Glutathione S-transferase, N-terminal domain
AL549_03350	PF13407	Periplasmic binding protein domain
AL549_03355	PF00990	GGDEF domain
AL549_03355	PF08447	PAS fold
AL549_03355	PF13426	PAS domain
AL549_03360	PF00158	Sigma-54 interaction domain
AL549_03360	PF01590	GAF domain
AL549_03360	PF02954	Bacterial regulatory protein, Fis family
AL549_03365	PF00171	Aldehyde dehydrogenase family
AL549_03370	PF00583	Acetyltransferase (GNAT) family
AL549_03375	PF01595	AL549_03375
AL549_03375	PF03471	Transporter associated domain
AL549_03380	PF10462	Peptidase M66
AL549_03380	PF12561	AL549_03380
AL549_03385	PF01327	Polypeptide deformylase
AL549_03390	PF03611	AL549_03390
AL549_03395	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_03400	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_03405	PF00356	Bacterial regulatory proteins, lacI family
AL549_03405	PF13377	Periplasmic binding protein-like domain
AL549_03410	PF00175	Oxidoreductase NAD-binding domain
AL549_03410	PF01794	AL549_03410
AL549_03410	PF08022	AL549_03410
AL549_03425	PF00005	ABC transporter
AL549_03430	PF03222	Tryptophan/tyrosine permease family
AL549_03435	PF01212	Beta-eliminating lyase
AL549_03445	PF00873	AcrB/AcrD/AcrF family
AL549_03450	PF11604	Copper binding periplasmic protein CusF
AL549_03450	PF16576	AL549_03450
AL549_03455	PF02321	Outer membrane efflux protein
AL549_03465	PF00753	Metallo-beta-lactamase superfamily
AL549_03470	PF05618	Putative ATP-dependant zinc protease
AL549_03475	PF08443	RimK-like ATP-grasp domain
AL549_03485	PF00668	Condensation domain
AL549_03490	PF00593	TonB dependent receptor
AL549_03490	PF07715	TonB-dependent Receptor Plug Domain
AL549_03495	PF01497	Periplasmic binding protein
AL549_03500	PF00550	Phosphopantetheine attachment site
AL549_03505	PF00501	AMP-binding enzyme
AL549_03505	PF13193	AMP-binding enzyme C-terminal domain
AL549_03510	PF01817	Chorismate mutase type II
AL549_03515	PF00550	Phosphopantetheine attachment site
AL549_03515	PF00857	Isochorismatase family
AL549_03520	PF04954	Siderophore-interacting protein
AL549_03520	PF08021	Siderophore-interacting FAD-binding domain
AL549_03525	PF00501	AMP-binding enzyme
AL549_03525	PF13193	AMP-binding enzyme C-terminal domain
AL549_03530	PF00425	chorismate binding enzyme
AL549_03535	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_03540	PF00793	DAHP synthetase I family
AL549_03545	PF00501	AMP-binding enzyme
AL549_03545	PF00668	Condensation domain
AL549_03545	PF13193	AMP-binding enzyme C-terminal domain
AL549_03550	PF00550	Phosphopantetheine attachment site
AL549_03550	PF00668	Condensation domain
AL549_03555	PF01648	4'-phosphopantetheinyl transferase superfamily
AL549_03560	PF04320	AL549_03560
AL549_03565	PF05787	Bacterial protein of unknown function (DUF839)
AL549_03570	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_03575	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_03580	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_03585	PF13472	GDSL-like Lipase/Acylhydrolase family
AL549_03590	PF00563	EAL domain
AL549_03595	PF14600	Cellulose-binding domain
AL549_03600	PF01243	Pyridoxamine 5'-phosphate oxidase
AL549_03605	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_03610	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_03615	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_03620	PF00005	ABC transporter
AL549_03625	PF04170	NlpE N-terminal domain
AL549_03630	PF10517	AL549_03630
AL549_03635	PF00924	Mechanosensitive ion channel
AL549_03640	PF00563	EAL domain
AL549_03640	PF02378	Phosphotransferase system, EIIC
AL549_03645	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL549_03650	PF00753	Metallo-beta-lactamase superfamily
AL549_03670	PF13505	Outer membrane protein beta-barrel domain
AL549_03675	PF07819	PGAP1-like protein
AL549_03680	PF01553	Acyltransferase
AL549_03680	PF07690	Major Facilitator Superfamily
AL549_03685	PF08487	AL549_03685
AL549_03685	PF13768	von Willebrand factor type A domain
AL549_03690	PF13443	Cro/C1-type HTH DNA-binding domain
AL549_03695	PF01565	FAD binding domain
AL549_03695	PF02754	AL549_03695
AL549_03695	PF02913	FAD linked oxidases, C-terminal domain
AL549_03695	PF13183	4Fe-4S dicluster domain
AL549_03700	PF02589	Uncharacterised ACR, YkgG family COG1556
AL549_03705	PF02589	Uncharacterised ACR, YkgG family COG1556
AL549_03705	PF11870	AL549_03705
AL549_03705	PF13183	4Fe-4S dicluster domain
AL549_03710	PF02754	AL549_03710
AL549_03715	PF02652	AL549_03715
AL549_03720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_03720	PF03466	LysR substrate binding domain
AL549_03725	PF00326	Prolyl oligopeptidase family
AL549_03725	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL549_03730	PF00005	ABC transporter
AL549_03730	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_03740	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL549_03740	PF13654	AAA domain
AL549_03745	PF07969	Amidohydrolase family
AL549_03750	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL549_03755	PF06445	GyrI-like small molecule binding domain
AL549_03755	PF12833	Helix-turn-helix domain
AL549_03760	PF01769	Divalent cation transporter
AL549_03760	PF03448	MgtE intracellular N domain
AL549_03765	PF13533	Biotin-lipoyl like
AL549_03765	PF16576	AL549_03765
AL549_03775	PF12625	AL549_03775
AL549_03775	PF12833	Helix-turn-helix domain
AL549_03785	PF00072	Response regulator receiver domain
AL549_03785	PF00486	Transcriptional regulatory protein, C terminal
AL549_03790	PF00512	His Kinase A (phospho-acceptor) domain
AL549_03790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_03795	PF12900	Pyridoxamine 5'-phosphate oxidase
AL549_03800	PF00155	Aminotransferase class I and II
AL549_03800	PF00392	Bacterial regulatory proteins, gntR family
AL549_03805	PF13230	Glutamine amidotransferases class-II
AL549_03810	PF13520	Amino acid permease
AL549_03820	PF01037	AsnC family
AL549_03820	PF13404	AsnC-type helix-turn-helix domain
AL549_03825	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_03825	PF03466	LysR substrate binding domain
AL549_03830	PF01810	AL549_03830
AL549_03835	PF08534	Redoxin
AL549_03840	PF00709	Adenylosuccinate synthetase
AL549_03845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_03845	PF03466	LysR substrate binding domain
AL549_03855	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_03855	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_03870	PF00072	Response regulator receiver domain
AL549_03870	PF00512	His Kinase A (phospho-acceptor) domain
AL549_03870	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_03875	PF01554	MatE
AL549_03880	PF04363	AL549_03880
AL549_03890	PF04337	Protein of unknown function, DUF480
AL549_03895	PF01541	GIY-YIG catalytic domain
AL549_03900	PF13729	AL549_03900
AL549_03905	PF13407	Periplasmic binding protein domain
AL549_03910	PF00072	Response regulator receiver domain
AL549_03910	PF00512	His Kinase A (phospho-acceptor) domain
AL549_03910	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_03910	PF09308	LuxQ, periplasmic
AL549_03915	PF07238	PilZ domain
AL549_03915	PF12945	Flagellar protein YcgR
AL549_03920	PF00892	EamA-like transporter family
AL549_03925	PF01037	AsnC family
AL549_03925	PF13412	Winged helix-turn-helix DNA-binding
AL549_03950	PF02355	Protein export membrane protein
AL549_03950	PF07549	SecD/SecF GG Motif
AL549_03950	PF13721	SecD export protein N-terminal TM region
AL549_03955	PF02355	Protein export membrane protein
AL549_03955	PF07549	SecD/SecF GG Motif
AL549_03960	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_03965	PF00108	Thiolase, N-terminal domain
AL549_03965	PF02803	Thiolase, C-terminal domain
AL549_03970	PF09361	AL549_03970
AL549_03975	PF07167	AL549_03975
AL549_03980	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_03980	PF12793	AL549_03980
AL549_03985	PF01979	Amidohydrolase family
AL549_03990	PF00480	ROK family
AL549_03995	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
AL549_04000	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_04005	PF04290	AL549_04005
AL549_04010	PF06808	AL549_04010
AL549_04015	PF00701	Dihydrodipicolinate synthetase family
AL549_04020	PF01380	SIS domain
AL549_04020	PF01418	Helix-turn-helix domain, rpiR family
AL549_04025	PF01344	Kelch motif
AL549_04035	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL549_04040	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AL549_04045	PF00384	Molybdopterin oxidoreductase
AL549_04045	PF01568	Molydopterin dinucleotide binding domain
AL549_04045	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_04050	PF03927	NapD protein
AL549_04055	PF00672	HAMP domain
AL549_04055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_04055	PF07730	Histidine kinase
AL549_04055	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL549_04060	PF00072	Response regulator receiver domain
AL549_04060	PF00196	Bacterial regulatory proteins, luxR family
AL549_04070	PF00072	Response regulator receiver domain
AL549_04075	PF00989	PAS fold
AL549_04080	PF01256	Carbohydrate kinase
AL549_04080	PF03853	YjeF-related protein N-terminus
AL549_04085	PF13505	Outer membrane protein beta-barrel domain
AL549_04090	PF00478	IMP dehydrogenase / GMP reductase domain
AL549_04095	PF13280	AL549_04095
AL549_04105	PF05099	Tellurite resistance protein TerB
AL549_04120	PF00520	Ion transport protein
AL549_04135	PF00588	SpoU rRNA Methylase family
AL549_04140	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL549_04140	PF14760	Rnk N-terminus
AL549_04145	PF00583	Acetyltransferase (GNAT) family
AL549_04155	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_04160	PF13302	Acetyltransferase (GNAT) domain
AL549_04170	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_04175	PF12614	AL549_04175
AL549_04180	PF00270	DEAD/DEAH box helicase
AL549_04180	PF00271	Helicase conserved C-terminal domain
AL549_04185	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_04190	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_04195	PF01047	MarR family
AL549_04200	PF01545	Cation efflux family
AL549_04210	PF12706	Beta-lactamase superfamily domain
AL549_04215	PF00440	Bacterial regulatory proteins, tetR family
AL549_04215	PF14246	AefR-like transcriptional repressor, C-terminal region
AL549_04220	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL549_04225	PF12698	ABC-2 family transporter protein
AL549_04230	PF00005	ABC transporter
AL549_04235	PF13437	HlyD family secretion protein
AL549_04235	PF13533	Biotin-lipoyl like
AL549_04240	PF01380	SIS domain
AL549_04240	PF01418	Helix-turn-helix domain, rpiR family
AL549_04245	PF01168	Alanine racemase, N-terminal domain
AL549_04245	PF14031	Putative serine dehydratase domain
AL549_04250	PF07969	Amidohydrolase family
AL549_04255	PF01042	Endoribonuclease L-PSP
AL549_04260	PF00474	Sodium:solute symporter family
AL549_04265	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL549_04265	PF02838	Glycosyl hydrolase family 20, domain 2
AL549_04270	PF10282	Lactonase, 7-bladed beta-propeller
AL549_04275	PF01042	Endoribonuclease L-PSP
AL549_04280	PF00563	EAL domain
AL549_04280	PF00990	GGDEF domain
AL549_04285	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_04285	PF03466	LysR substrate binding domain
AL549_04290	PF07690	Major Facilitator Superfamily
AL549_04300	PF00462	Glutaredoxin
AL549_04305	PF00892	EamA-like transporter family
AL549_04310	PF00563	EAL domain
AL549_04310	PF00990	GGDEF domain
AL549_04315	PF13609	Gram-negative porin
AL549_04320	PF00578	AhpC/TSA family
AL549_04330	PF02566	OsmC-like protein
AL549_04335	PF01047	MarR family
AL549_04340	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL549_04345	PF05437	AL549_04345
AL549_04350	PF03591	AL549_04350
AL549_04355	PF02311	AraC-like ligand binding domain
AL549_04355	PF12833	Helix-turn-helix domain
AL549_04360	PF01810	AL549_04360
AL549_04365	PF13673	Acetyltransferase (GNAT) domain
AL549_04370	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_04370	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_04370	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_04370	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_04375	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL549_04375	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AL549_04375	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_04380	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL549_04385	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
AL549_04390	PF00510	Cytochrome c oxidase subunit III
AL549_04400	PF02104	AL549_04400
AL549_04410	PF02628	AL549_04410
AL549_04415	PF01040	UbiA prenyltransferase family
AL549_04420	PF00691	OmpA family
AL549_04420	PF01389	OmpA-like transmembrane domain
AL549_04425	PF00793	DAHP synthetase I family
AL549_04430	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_04430	PF08447	PAS fold
AL549_04435	PF00563	EAL domain
AL549_04435	PF00672	HAMP domain
AL549_04435	PF00990	GGDEF domain
AL549_04435	PF14827	Sensory domain of two-component sensor kinase
AL549_04445	PF00456	Transketolase, thiamine diphosphate binding domain
AL549_04445	PF02779	Transketolase, pyrimidine binding domain
AL549_04445	PF02780	Transketolase, C-terminal domain
AL549_04450	PF00923	Transaldolase
AL549_04455	PF04198	Putative sugar-binding domain
AL549_04460	PF00704	Glycosyl hydrolases family 18
AL549_04465	PF00563	EAL domain
AL549_04465	PF00990	GGDEF domain
AL549_04470	PF00581	Rhodanese-like domain
AL549_04475	PF00899	ThiF family
AL549_04480	PF00994	Probable molybdopterin binding domain
AL549_04480	PF03453	MoeA N-terminal region (domain I and II)
AL549_04480	PF03454	MoeA C-terminal region (domain IV)
AL549_04485	PF01227	GTP cyclohydrolase I
AL549_04490	PF01566	AL549_04490
AL549_04495	PF03595	Voltage-dependent anion channel
AL549_04500	PF00654	Voltage gated chloride channel
AL549_04520	PF00248	Aldo/keto reductase family
AL549_04530	PF01546	Peptidase family M20/M25/M40
AL549_04530	PF07687	Peptidase dimerisation domain
AL549_04535	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_04540	PF16576	AL549_04540
AL549_04545	PF00873	AcrB/AcrD/AcrF family
AL549_04550	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_04555	PF13419	Haloacid dehalogenase-like hydrolase
AL549_04560	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_04560	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL549_04565	PF13462	Thioredoxin
AL549_04570	PF00691	OmpA family
AL549_04575	PF13417	Glutathione S-transferase, N-terminal domain
AL549_04585	PF07152	YaeQ protein
AL549_04590	PF00313	'Cold-shock' DNA-binding domain
AL549_04595	PF03889	AL549_04595
AL549_04600	PF06738	AL549_04600
AL549_04600	PF12821	AL549_04600
AL549_04605	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_04605	PF00990	GGDEF domain
AL549_04615	PF01238	Phosphomannose isomerase type I
AL549_04620	PF07690	Major Facilitator Superfamily
AL549_04625	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_04625	PF05231	AL549_04625
AL549_04625	PF07730	Histidine kinase
AL549_04630	PF00072	Response regulator receiver domain
AL549_04630	PF00196	Bacterial regulatory proteins, luxR family
AL549_04635	PF07690	Major Facilitator Superfamily
AL549_04640	PF11216	AL549_04640
AL549_04645	PF00043	Glutathione S-transferase, C-terminal domain
AL549_04645	PF02798	Glutathione S-transferase, N-terminal domain
AL549_04650	PF00107	Zinc-binding dehydrogenase
AL549_04650	PF16884	AL549_04650
AL549_04655	PF00440	Bacterial regulatory proteins, tetR family
AL549_04660	PF01699	Sodium/calcium exchanger protein
AL549_04670	PF00313	'Cold-shock' DNA-binding domain
AL549_04675	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_04675	PF13192	Thioredoxin domain
AL549_04680	PF00578	AhpC/TSA family
AL549_04680	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL549_04685	PF00682	HMGL-like
AL549_04690	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_04695	PF01039	Carboxyl transferase domain
AL549_04700	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_04700	PF02770	Acyl-CoA dehydrogenase, middle domain
AL549_04700	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_04705	PF13411	MerR HTH family regulatory protein
AL549_04710	PF00108	Thiolase, N-terminal domain
AL549_04710	PF02803	Thiolase, C-terminal domain
AL549_04715	PF00171	Aldehyde dehydrogenase family
AL549_04720	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_04720	PF02770	Acyl-CoA dehydrogenase, middle domain
AL549_04720	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_04725	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_04730	PF16113	AL549_04730
AL549_04735	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL549_04735	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL549_04740	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_04750	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_04755	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_04760	PF00005	ABC transporter
AL549_04760	PF00664	ABC transporter transmembrane region
AL549_04760	PF03412	Peptidase C39 family
AL549_04765	PF13437	HlyD family secretion protein
AL549_04770	PF00005	ABC transporter
AL549_04770	PF00664	ABC transporter transmembrane region
AL549_04770	PF03412	Peptidase C39 family
AL549_04780	PF02794	AL549_04780
AL549_04785	PF07634	AL549_04785
AL549_04785	PF11647	C-terminal region of Pasteurella multocida toxin residues 569-1285
AL549_04785	PF11713	Peptidase C80 family
AL549_04785	PF12146	Putative lysophospholipase
AL549_04790	PF00842	Alanine racemase, C-terminal domain
AL549_04790	PF01168	Alanine racemase, N-terminal domain
AL549_04795	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_04795	PF12729	AL549_04795
AL549_04800	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
AL549_04800	PF13450	NAD(P)-binding Rossmann-like domain
AL549_04805	PF01012	Electron transfer flavoprotein domain
AL549_04810	PF00766	Electron transfer flavoprotein FAD-binding domain
AL549_04810	PF01012	Electron transfer flavoprotein domain
AL549_04815	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL549_04815	PF00364	Biotin-requiring enzyme
AL549_04815	PF02817	e3 binding domain
AL549_04820	PF02779	Transketolase, pyrimidine binding domain
AL549_04820	PF02780	Transketolase, C-terminal domain
AL549_04825	PF00676	Dehydrogenase E1 component
AL549_04830	PF00962	Adenosine/AMP deaminase
AL549_04835	PF08883	Dopa 4,5-dioxygenase family
AL549_04840	PF00072	Response regulator receiver domain
AL549_04840	PF11849	AL549_04840
AL549_04840	PF13487	HD domain
AL549_04845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_04845	PF17149	AL549_04845
AL549_04865	PF01545	Cation efflux family
AL549_04870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_04870	PF03466	LysR substrate binding domain
AL549_04875	PF08242	Methyltransferase domain
AL549_04880	PF00501	AMP-binding enzyme
AL549_04885	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
AL549_04890	PF01329	Pterin 4 alpha carbinolamine dehydratase
AL549_04895	PF00563	EAL domain
AL549_04895	PF00990	GGDEF domain
AL549_04900	PF08888	HopJ type III effector protein
AL549_04905	PF06945	AL549_04905
AL549_04905	PF14375	AL549_04905
AL549_04910	PF12843	AL549_04910
AL549_04915	PF03479	Domain of unknown function (DUF296)
AL549_04920	PF00440	Bacterial regulatory proteins, tetR family
AL549_04925	PF00043	Glutathione S-transferase, C-terminal domain
AL549_04925	PF13417	Glutathione S-transferase, N-terminal domain
AL549_04930	PF00069	Protein kinase domain
AL549_04935	PF00498	FHA domain
AL549_04940	PF12790	Type VI secretion lipoprotein
AL549_04945	PF05936	AL549_04945
AL549_04950	PF00691	OmpA family
AL549_04950	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AL549_04955	PF06744	AL549_04955
AL549_04955	PF06761	AL549_04955
AL549_04955	PF14331	AL549_04955
AL549_04960	PF09867	Uncharacterized protein conserved in bacteria (DUF2094)
AL549_04965	PF13672	Protein phosphatase 2C
AL549_04970	PF06812	AL549_04970
AL549_04975	PF05591	AL549_04975
AL549_04980	PF05943	AL549_04980
AL549_04985	PF05943	AL549_04985
AL549_04990	PF07024	ImpE protein
AL549_04995	PF04965	Gene 25-like lysozyme
AL549_05000	PF05947	AL549_05000
AL549_05005	PF06996	AL549_05005
AL549_05010	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_05010	PF07724	AAA domain (Cdc48 subfamily)
AL549_05010	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_05015	PF05638	Protein of unknown function (DUF796)
AL549_05020	PF05954	Phage late control gene D protein (GPD)
AL549_05025	PF05488	PAAR motif
AL549_05035	PF03527	AL549_05035
AL549_05035	PF05593	AL549_05035
AL549_05060	PF15575	AL549_05060
AL549_05075	PF08887	AL549_05075
AL549_05075	PF08906	AL549_05075
AL549_05090	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_05095	PF01435	Peptidase family M48
AL549_05100	PF04011	LemA family
AL549_05105	PF03606	AL549_05105
AL549_05110	PF07963	Prokaryotic N-terminal methylation motif
AL549_05115	PF01523	Putative modulator of DNA gyrase
AL549_05120	PF01523	Putative modulator of DNA gyrase
AL549_05125	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL549_05130	PF07690	Major Facilitator Superfamily
AL549_05135	PF00652	Ricin-type beta-trefoil lectin domain
AL549_05135	PF07968	Leukocidin/Hemolysin toxin family
AL549_05145	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_05145	PF00672	HAMP domain
AL549_05145	PF02743	Cache domain
AL549_05150	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_05150	PF00672	HAMP domain
AL549_05150	PF02743	Cache domain
AL549_05155	PF00128	Alpha amylase, catalytic domain
AL549_05160	PF00583	Acetyltransferase (GNAT) family
AL549_05165	PF00384	Molybdopterin oxidoreductase
AL549_05165	PF01568	Molydopterin dinucleotide binding domain
AL549_05165	PF04324	BFD-like [2Fe-2S] binding domain
AL549_05165	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_05170	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_05175	PF02885	Glycosyl transferase family, helical bundle domain
AL549_05180	PF01738	Dienelactone hydrolase family
AL549_05185	PF03861	ANTAR domain
AL549_05190	PF13379	NMT1-like family
AL549_05195	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_05200	PF00005	ABC transporter
AL549_05205	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL549_05205	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL549_05205	PF04324	BFD-like [2Fe-2S] binding domain
AL549_05205	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_05210	PF13806	Rieske-like [2Fe-2S] domain
AL549_05215	PF02412	Thrombospondin type 3 repeat
AL549_05220	PF00990	GGDEF domain
AL549_05220	PF13181	Tetratricopeptide repeat
AL549_05220	PF13424	Tetratricopeptide repeat
AL549_05225	PF12847	Methyltransferase domain
AL549_05230	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL549_05240	PF00270	DEAD/DEAH box helicase
AL549_05240	PF00271	Helicase conserved C-terminal domain
AL549_05245	PF00491	Arginase family
AL549_05250	PF01614	Bacterial transcriptional regulator
AL549_05250	PF09339	IclR helix-turn-helix domain
AL549_05255	PF00072	Response regulator receiver domain
AL549_05255	PF00990	GGDEF domain
AL549_05260	PF01339	CheB methylesterase
AL549_05265	PF01739	CheR methyltransferase, SAM binding domain
AL549_05265	PF03705	CheR methyltransferase, all-alpha domain
AL549_05270	PF00072	Response regulator receiver domain
AL549_05270	PF00512	His Kinase A (phospho-acceptor) domain
AL549_05270	PF00672	HAMP domain
AL549_05270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_05270	PF02743	Cache domain
AL549_05270	PF13185	GAF domain
AL549_05275	PF01575	MaoC like domain
AL549_05295	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_05295	PF08447	PAS fold
AL549_05300	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL549_05300	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL549_05300	PF04324	BFD-like [2Fe-2S] binding domain
AL549_05300	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_05305	PF13806	Rieske-like [2Fe-2S] domain
AL549_05310	PF01226	Formate/nitrite transporter
AL549_05315	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_05320	PF13778	AL549_05320
AL549_05325	PF01936	NYN domain
AL549_05330	PF11932	AL549_05330
AL549_05335	PF01618	AL549_05335
AL549_05340	PF01618	AL549_05340
AL549_05345	PF02472	Biopolymer transport protein ExbD/TolR
AL549_05350	PF03544	Gram-negative bacterial TonB protein C-terminal
AL549_05355	PF13428	Tetratricopeptide repeat
AL549_05360	PF03605	AL549_05360
AL549_05365	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_05365	PF00672	HAMP domain
AL549_05365	PF17200	AL549_05365
AL549_05370	PF11661	AL549_05370
AL549_05375	PF11756	AL549_05375
AL549_05380	PF01554	MatE
AL549_05385	PF12833	Helix-turn-helix domain
AL549_05390	PF07690	Major Facilitator Superfamily
AL549_05395	PF00085	Thioredoxin
AL549_05400	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL549_05400	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL549_05405	PF07394	AL549_05405
AL549_05410	PF08811	AL549_05410
AL549_05415	PF00581	Rhodanese-like domain
AL549_05415	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_05415	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_05420	PF11127	Protein of unknown function (DUF2892)
AL549_05425	PF01022	Bacterial regulatory protein, arsR family
AL549_05430	PF04143	AL549_05430
AL549_05435	PF04143	AL549_05435
AL549_05440	PF16576	AL549_05440
AL549_05445	PF00873	AcrB/AcrD/AcrF family
AL549_05450	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_05455	PF03477	ATP cone domain
AL549_05455	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AL549_05460	PF13353	4Fe-4S single cluster domain
AL549_05465	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_05465	PF02743	Cache domain
AL549_05470	PF00155	Aminotransferase class I and II
AL549_05475	PF05618	Putative ATP-dependant zinc protease
AL549_05480	PF01609	Transposase DDE domain
AL549_05480	PF13006	AL549_05480
AL549_05490	PF04076	Bacterial OB fold (BOF) protein
AL549_05495	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL549_05495	PF07685	CobB/CobQ-like glutamine amidotransferase domain
AL549_05500	PF13531	Bacterial extracellular solute-binding protein
AL549_05505	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_05510	PF00005	ABC transporter
AL549_05510	PF03459	TOBE domain
AL549_05515	PF00892	EamA-like transporter family
AL549_05520	PF01047	MarR family
AL549_05525	PF11269	Protein of unknown function (DUF3069)
AL549_05530	PF00072	Response regulator receiver domain
AL549_05530	PF00990	GGDEF domain
AL549_05535	PF11557	AL549_05535
AL549_05540	PF00990	GGDEF domain
AL549_05545	PF10719	AL549_05545
AL549_05550	PF10115	AL549_05550
AL549_05555	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL549_05555	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL549_05555	PF12769	Domain of unknown function (DUF3814)
AL549_05560	PF02233	NAD(P) transhydrogenase beta subunit
AL549_05565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_05565	PF11884	Domain of unknown function (DUF3404)
AL549_05570	PF00072	Response regulator receiver domain
AL549_05570	PF00486	Transcriptional regulatory protein, C terminal
AL549_05575	PF11060	AL549_05575
AL549_05580	PF13729	AL549_05580
AL549_05590	PF01253	Translation initiation factor SUI1
AL549_05595	PF11782	AL549_05595
AL549_05600	PF01820	D-ala D-ala ligase N-terminus
AL549_05600	PF07478	D-ala D-ala ligase C-terminus
AL549_05605	PF05036	Sporulation related domain
AL549_05610	PF00583	Acetyltransferase (GNAT) family
AL549_05610	PF13380	CoA binding domain
AL549_05610	PF13549	ATP-grasp domain
AL549_05610	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL549_05615	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_05615	PF03466	LysR substrate binding domain
AL549_05620	PF00593	TonB dependent receptor
AL549_05620	PF07715	TonB-dependent Receptor Plug Domain
AL549_05625	PF00989	PAS fold
AL549_05625	PF00990	GGDEF domain
AL549_05625	PF13426	PAS domain
AL549_05625	PF17152	AL549_05625
AL549_05630	PF13689	AL549_05630
AL549_05635	PF03746	LamB/YcsF family
AL549_05640	PF02682	Allophanate hydrolase subunit 1
AL549_05645	PF02626	Allophanate hydrolase subunit 2
AL549_05650	PF01266	FAD dependent oxidoreductase
AL549_05655	PF02687	AL549_05655
AL549_05655	PF12704	MacB-like periplasmic core domain
AL549_05660	PF00005	ABC transporter
AL549_05665	PF13472	GDSL-like Lipase/Acylhydrolase family
AL549_05670	PF07055	Enoyl reductase FAD binding domain
AL549_05670	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL549_05670	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL549_05675	PF00563	EAL domain
AL549_05675	PF00990	GGDEF domain
AL549_05680	PF09818	Predicted ATPase of the ABC class
AL549_05685	PF13302	Acetyltransferase (GNAT) domain
AL549_05690	PF00226	DnaJ domain
AL549_05690	PF12339	AL549_05690
AL549_05695	PF03171	2OG-Fe(II) oxygenase superfamily
AL549_05695	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
AL549_05700	PF09997	AL549_05700
AL549_05705	PF03091	CutA1 divalent ion tolerance protein
AL549_05710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_05710	PF03466	LysR substrate binding domain
AL549_05715	PF00128	Alpha amylase, catalytic domain
AL549_05715	PF16657	AL549_05715
AL549_05725	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_05725	PF12793	AL549_05725
AL549_05730	PF11869	AL549_05730
AL549_05735	PF03061	Thioesterase superfamily
AL549_05740	PF01435	Peptidase family M48
AL549_05750	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_05755	PF12262	AL549_05755
AL549_05760	PF03831	PhnA protein
AL549_05760	PF08274	PhnA Zinc-Ribbon
AL549_05765	PF12680	SnoaL-like domain
AL549_05770	PF00491	Arginase family
AL549_05775	PF00892	EamA-like transporter family
AL549_05785	PF03741	AL549_05785
AL549_05790	PF00149	Calcineurin-like phosphoesterase
AL549_05790	PF02872	5'-nucleotidase, C-terminal domain
AL549_05795	PF11398	Protein of unknown function (DUF2813)
AL549_05800	PF06496	AL549_05800
AL549_05805	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_05805	PF03466	LysR substrate binding domain
AL549_05810	PF00571	CBS domain
AL549_05810	PF01226	Formate/nitrite transporter
AL549_05815	PF04264	YceI-like domain
AL549_05820	PF01292	Prokaryotic cytochrome b561
AL549_05830	PF00563	EAL domain
AL549_05835	PF00270	DEAD/DEAH box helicase
AL549_05835	PF00271	Helicase conserved C-terminal domain
AL549_05840	PF04336	AL549_05840
AL549_05845	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_05850	PF13419	Haloacid dehalogenase-like hydrolase
AL549_05855	PF13487	HD domain
AL549_05865	PF05981	AL549_05865
AL549_05870	PF00294	pfkB family carbohydrate kinase
AL549_05875	PF01268	Formate--tetrahydrofolate ligase
AL549_05880	PF00483	Nucleotidyl transferase
AL549_05885	PF00704	Glycosyl hydrolases family 18
AL549_05885	PF06483	AL549_05885
AL549_05890	PF06719	AL549_05890
AL549_05890	PF12833	Helix-turn-helix domain
AL549_05895	PF00465	Iron-containing alcohol dehydrogenase
AL549_05900	PF00072	Response regulator receiver domain
AL549_05900	PF02954	Bacterial regulatory protein, Fis family
AL549_05900	PF14532	Sigma-54 interaction domain
AL549_05905	PF00512	His Kinase A (phospho-acceptor) domain
AL549_05905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_05910	PF13343	Bacterial extracellular solute-binding protein
AL549_05915	PF07690	Major Facilitator Superfamily
AL549_05920	PF00224	Pyruvate kinase, barrel domain
AL549_05920	PF02887	Pyruvate kinase, alpha/beta domain
AL549_05925	PF00563	EAL domain
AL549_05930	PF13275	S4 domain
AL549_05935	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_05940	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_05945	PF00356	Bacterial regulatory proteins, lacI family
AL549_05945	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL549_05950	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_05950	PF00381	PTS HPr component phosphorylation site
AL549_05955	PF00294	pfkB family carbohydrate kinase
AL549_05960	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_05960	PF02378	Phosphotransferase system, EIIC
AL549_05965	PF13505	Outer membrane protein beta-barrel domain
AL549_05970	PF00873	AcrB/AcrD/AcrF family
AL549_05975	PF13437	HlyD family secretion protein
AL549_05975	PF13533	Biotin-lipoyl like
AL549_05980	PF16576	AL549_05980
AL549_05985	PF00440	Bacterial regulatory proteins, tetR family
AL549_05990	PF00089	Trypsin
AL549_05995	PF01571	Aminomethyltransferase folate-binding domain
AL549_05995	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL549_06000	PF01381	Helix-turn-helix
AL549_06000	PF07883	Cupin domain
AL549_06005	PF00464	Serine hydroxymethyltransferase
AL549_06010	PF01597	Glycine cleavage H-protein
AL549_06015	PF02347	Glycine cleavage system P-protein
AL549_06025	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
AL549_06035	PF00005	ABC transporter
AL549_06035	PF00664	ABC transporter transmembrane region
AL549_06040	PF01909	Nucleotidyltransferase domain
AL549_06045	PF00795	Carbon-nitrogen hydrolase
AL549_06055	PF16691	AL549_06055
AL549_06060	PF02661	Fic/DOC family
AL549_06060	PF13776	AL549_06060
AL549_06070	PF13437	HlyD family secretion protein
AL549_06070	PF13533	Biotin-lipoyl like
AL549_06075	PF07690	Major Facilitator Superfamily
AL549_06090	PF07690	Major Facilitator Superfamily
AL549_06095	PF08774	VRR-NUC domain
AL549_06100	PF13432	Tetratricopeptide repeat
AL549_06105	PF04055	Radical SAM superfamily
AL549_06105	PF13186	Iron-sulfur cluster-binding domain
AL549_06110	PF03781	Sulfatase-modifying factor enzyme 1
AL549_06115	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
AL549_06120	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_06120	PF03466	LysR substrate binding domain
AL549_06125	PF13584	AL549_06125
AL549_06130	PF13519	von Willebrand factor type A domain
AL549_06135	PF00092	von Willebrand factor type A domain
AL549_06140	PF14316	AL549_06140
AL549_06145	PF01882	AL549_06145
AL549_06150	PF07726	ATPase family associated with various cellular activities (AAA)
AL549_06155	PF04055	Radical SAM superfamily
AL549_06155	PF13186	Iron-sulfur cluster-binding domain
AL549_06155	PF13353	4Fe-4S single cluster domain
AL549_06160	PF00884	Sulfatase
AL549_06165	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_06165	PF03466	LysR substrate binding domain
AL549_06170	PF00884	Sulfatase
AL549_06175	PF00871	Acetokinase family
AL549_06180	PF00270	DEAD/DEAH box helicase
AL549_06180	PF00271	Helicase conserved C-terminal domain
AL549_06180	PF03880	DbpA RNA binding domain
AL549_06185	PF00575	S1 RNA binding domain
AL549_06185	PF00773	RNB domain
AL549_06185	PF08206	Ribonuclease B OB domain
AL549_06190	PF12833	Helix-turn-helix domain
AL549_06195	PF11225	AL549_06195
AL549_06200	PF12849	PBP superfamily domain
AL549_06210	PF00563	EAL domain
AL549_06210	PF00990	GGDEF domain
AL549_06210	PF01590	GAF domain
AL549_06220	PF00072	Response regulator receiver domain
AL549_06225	PF00072	Response regulator receiver domain
AL549_06225	PF00196	Bacterial regulatory proteins, luxR family
AL549_06225	PF00563	EAL domain
AL549_06230	PF00072	Response regulator receiver domain
AL549_06230	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_06230	PF00512	His Kinase A (phospho-acceptor) domain
AL549_06230	PF01627	Hpt domain
AL549_06230	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_06235	PF00270	DEAD/DEAH box helicase
AL549_06235	PF00271	Helicase conserved C-terminal domain
AL549_06235	PF03880	DbpA RNA binding domain
AL549_06240	PF11854	AL549_06240
AL549_06245	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL549_06255	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_06260	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL549_06265	PF03781	Sulfatase-modifying factor enzyme 1
AL549_06265	PF08308	AL549_06265
AL549_06270	PF08308	AL549_06270
AL549_06275	PF06934	AL549_06275
AL549_06285	PF00072	Response regulator receiver domain
AL549_06285	PF00512	His Kinase A (phospho-acceptor) domain
AL549_06285	PF01627	Hpt domain
AL549_06285	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_06290	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL549_06295	PF02142	MGS-like domain
AL549_06300	PF00580	UvrD/REP helicase N-terminal domain
AL549_06300	PF12462	AL549_06300
AL549_06300	PF13361	UvrD-like helicase C-terminal domain
AL549_06305	PF12805	AL549_06305
AL549_06305	PF13515	AL549_06305
AL549_06320	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
AL549_06330	PF10688	AL549_06330
AL549_06335	PF00376	MerR family regulatory protein
AL549_06335	PF09278	MerR, DNA binding
AL549_06340	PF00005	ABC transporter
AL549_06345	PF01032	FecCD transport family
AL549_06350	PF01032	FecCD transport family
AL549_06355	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL549_06360	PF00293	NUDIX domain
AL549_06365	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_06365	PF12464	Maltose acetyltransferase
AL549_06370	PF00072	Response regulator receiver domain
AL549_06375	PF14501	GHKL domain
AL549_06375	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL549_06375	PF17203	AL549_06375
AL549_06380	PF00939	Sodium:sulfate symporter transmembrane region
AL549_06385	PF01764	Lipase (class 3)
AL549_06405	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_06410	PF00031	Cystatin domain
AL549_06415	PF00691	OmpA family
AL549_06425	PF16964	AL549_06425
AL549_06435	PF13432	Tetratricopeptide repeat
AL549_06440	PF00482	Type II secretion system (T2SS), protein F
AL549_06445	PF00482	Type II secretion system (T2SS), protein F
AL549_06450	PF00437	Type II/IV secretion system protein
AL549_06465	PF00263	AL549_06465
AL549_06465	PF13629	AL549_06465
AL549_06475	PF04964	AL549_06475
AL549_06480	PF01478	Type IV leader peptidase family
AL549_06485	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_06490	PF05547	AL549_06490
AL549_06495	PF13476	AAA domain
AL549_06495	PF13558	Putative exonuclease SbcCD, C subunit
AL549_06500	PF00149	Calcineurin-like phosphoesterase
AL549_06500	PF12320	Type 5 capsule protein repressor C-terminal domain
AL549_06505	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_06505	PF08447	PAS fold
AL549_06510	PF01926	50S ribosome-binding GTPase
AL549_06515	PF00583	Acetyltransferase (GNAT) family
AL549_06520	PF00487	AL549_06520
AL549_06525	PF00072	Response regulator receiver domain
AL549_06525	PF01584	CheW-like domain
AL549_06530	PF00356	Bacterial regulatory proteins, lacI family
AL549_06530	PF13377	Periplasmic binding protein-like domain
AL549_06535	PF00294	pfkB family carbohydrate kinase
AL549_06540	PF13407	Periplasmic binding protein domain
AL549_06545	PF02653	AL549_06545
AL549_06550	PF00005	ABC transporter
AL549_06555	PF05025	RbsD / FucU transport protein family
AL549_06560	PF01810	AL549_06560
AL549_06565	PF06127	AL549_06565
AL549_06570	PF04237	YjbR
AL549_06575	PF05762	VWA domain containing CoxE-like protein
AL549_06580	PF07728	AAA domain (dynein-related subfamily)
AL549_06580	PF12592	Protein of unknown function (DUF3763)
AL549_06585	PF00293	NUDIX domain
AL549_06590	PF01212	Beta-eliminating lyase
AL549_06595	PF00034	Cytochrome c
AL549_06600	PF00171	Aldehyde dehydrogenase family
AL549_06605	PF03606	AL549_06605
AL549_06610	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_06615	PF01569	PAP2 superfamily
AL549_06620	PF04266	ASCH domain
AL549_06625	PF01852	START domain
AL549_06630	PF00892	EamA-like transporter family
AL549_06635	PF03067	Chitin binding domain
AL549_06640	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_06645	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_06645	PF02743	Cache domain
AL549_06650	PF01925	AL549_06650
AL549_06655	PF00149	Calcineurin-like phosphoesterase
AL549_06660	PF03222	Tryptophan/tyrosine permease family
AL549_06665	PF11964	SpoIIAA-like
AL549_06670	PF07238	PilZ domain
AL549_06680	PF01447	Thermolysin metallopeptidase, catalytic domain
AL549_06680	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL549_06685	PF02308	AL549_06685
AL549_06685	PF13194	AL549_06685
AL549_06690	PF00873	AcrB/AcrD/AcrF family
AL549_06695	PF16576	AL549_06695
AL549_06705	PF10604	Polyketide cyclase / dehydrase and lipid transport
AL549_06720	PF00581	Rhodanese-like domain
AL549_06725	PF00012	Hsp70 protein
AL549_06730	PF00465	Iron-containing alcohol dehydrogenase
AL549_06735	PF06961	AL549_06735
AL549_06740	PF07995	Glucose / Sorbosone dehydrogenase
AL549_06745	PF02016	LD-carboxypeptidase
AL549_06750	PF01212	Beta-eliminating lyase
AL549_06755	PF13419	Haloacid dehalogenase-like hydrolase
AL549_06760	PF02754	AL549_06760
AL549_06760	PF13183	4Fe-4S dicluster domain
AL549_06765	PF00890	FAD binding domain
AL549_06770	PF01266	FAD dependent oxidoreductase
AL549_06770	PF04324	BFD-like [2Fe-2S] binding domain
AL549_06780	PF01483	Proprotein convertase P-domain
AL549_06780	PF13582	Metallo-peptidase family M12B Reprolysin-like
AL549_06785	PF10974	AL549_06785
AL549_06790	PF03618	AL549_06790
AL549_06795	PF00391	PEP-utilising enzyme, mobile domain
AL549_06795	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL549_06795	PF02896	PEP-utilising enzyme, TIM barrel domain
AL549_06800	PF04224	AL549_06800
AL549_06805	PF00005	ABC transporter
AL549_06810	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_06815	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL549_06820	PF00732	GMC oxidoreductase
AL549_06820	PF05199	GMC oxidoreductase
AL549_06825	PF00171	Aldehyde dehydrogenase family
AL549_06830	PF00440	Bacterial regulatory proteins, tetR family
AL549_06830	PF13977	Bacterial transcriptional repressor
AL549_06835	PF13181	Tetratricopeptide repeat
AL549_06840	PF01551	Peptidase family M23
AL549_06850	PF00768	D-alanyl-D-alanine carboxypeptidase
AL549_06850	PF07943	Penicillin-binding protein 5, C-terminal domain
AL549_06855	PF00293	NUDIX domain
AL549_06865	PF02698	DUF218 domain
AL549_06870	PF03313	AL549_06870
AL549_06870	PF03315	Serine dehydratase beta chain
AL549_06875	PF07690	Major Facilitator Superfamily
AL549_06880	PF01636	Phosphotransferase enzyme family
AL549_06885	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_06885	PF03466	LysR substrate binding domain
AL549_06890	PF01266	FAD dependent oxidoreductase
AL549_06895	PF00892	EamA-like transporter family
AL549_06900	PF00392	Bacterial regulatory proteins, gntR family
AL549_06900	PF07702	UTRA domain
AL549_06905	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_06910	PF00005	ABC transporter
AL549_06910	PF08402	TOBE domain
AL549_06920	PF13343	Bacterial extracellular solute-binding protein
AL549_06925	PF00266	Aminotransferase class-V
AL549_06930	PF00202	Aminotransferase class-III
AL549_06935	PF13419	Haloacid dehalogenase-like hydrolase
AL549_06940	PF06445	GyrI-like small molecule binding domain
AL549_06940	PF12833	Helix-turn-helix domain
AL549_06945	PF00155	Aminotransferase class I and II
AL549_06955	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_06965	PF12833	Helix-turn-helix domain
AL549_06965	PF12852	Cupin
AL549_06970	PF13419	Haloacid dehalogenase-like hydrolase
AL549_06975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_06975	PF03466	LysR substrate binding domain
AL549_06985	PF08279	HTH domain
AL549_06985	PF13280	AL549_06985
AL549_06990	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_06990	PF12464	Maltose acetyltransferase
AL549_06995	PF02566	OsmC-like protein
AL549_07000	PF01625	Peptide methionine sulfoxide reductase
AL549_07000	PF01641	SelR domain
AL549_07005	PF00990	GGDEF domain
AL549_07015	PF01381	Helix-turn-helix
AL549_07015	PF06114	Domain of unknown function (DUF955)
AL549_07015	PF12268	AL549_07015
AL549_07020	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_07020	PF08376	Nitrate and nitrite sensing
AL549_07025	PF00990	GGDEF domain
AL549_07025	PF03924	CHASE domain
AL549_07030	PF13532	2OG-Fe(II) oxygenase superfamily
AL549_07035	PF12060	AL549_07035
AL549_07040	PF01773	Na+ dependent nucleoside transporter N-terminus
AL549_07040	PF07662	Na+ dependent nucleoside transporter C-terminus
AL549_07040	PF07670	Nucleoside recognition
AL549_07050	PF11140	AL549_07050
AL549_07055	PF13302	Acetyltransferase (GNAT) domain
AL549_07060	PF07963	Prokaryotic N-terminal methylation motif
AL549_07065	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL549_07065	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL549_07075	PF01564	Spermine/spermidine synthase
AL549_07080	PF13419	Haloacid dehalogenase-like hydrolase
AL549_07085	PF01551	Peptidase family M23
AL549_07085	PF04225	Opacity-associated protein A LysM-like domain
AL549_07095	PF06912	AL549_07095
AL549_07100	PF07670	Nucleoside recognition
AL549_07105	PF04932	AL549_07105
AL549_07110	PF01757	AL549_07110
AL549_07115	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_07115	PF00672	HAMP domain
AL549_07115	PF02743	Cache domain
AL549_07120	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_07120	PF00672	HAMP domain
AL549_07120	PF02743	Cache domain
AL549_07125	PF00128	Alpha amylase, catalytic domain
AL549_07130	PF00582	Universal stress protein family
AL549_07135	PF13616	PPIC-type PPIASE domain
AL549_07140	PF00072	Response regulator receiver domain
AL549_07140	PF01584	CheW-like domain
AL549_07145	PF01923	Cobalamin adenosyltransferase
AL549_07150	PF01243	Pyridoxamine 5'-phosphate oxidase
AL549_07155	PF06228	Haem utilisation ChuX/HutX
AL549_07160	PF04055	Radical SAM superfamily
AL549_07165	PF03544	Gram-negative bacterial TonB protein C-terminal
AL549_07170	PF01618	AL549_07170
AL549_07175	PF02472	Biopolymer transport protein ExbD/TolR
AL549_07180	PF01497	Periplasmic binding protein
AL549_07185	PF01032	FecCD transport family
AL549_07190	PF00005	ABC transporter
AL549_07195	PF00440	Bacterial regulatory proteins, tetR family
AL549_07200	PF04175	Protein of unknown function (DUF406)
AL549_07205	PF07383	AL549_07205
AL549_07215	PF01928	CYTH domain
AL549_07215	PF05235	CHAD domain
AL549_07220	PF00520	Ion transport protein
AL549_07225	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_07230	PF03710	Glutamate-ammonia ligase adenylyltransferase
AL549_07230	PF08335	GlnD PII-uridylyltransferase
AL549_07235	PF00294	pfkB family carbohydrate kinase
AL549_07235	PF01467	Cytidylyltransferase
AL549_07240	PF02321	Outer membrane efflux protein
AL549_07245	PF00293	NUDIX domain
AL549_07250	PF06853	AL549_07250
AL549_07255	PF00149	Calcineurin-like phosphoesterase
AL549_07260	PF05728	Uncharacterised protein family (UPF0227)
AL549_07265	PF00204	DNA gyrase B
AL549_07265	PF00986	DNA gyrase B subunit, carboxyl terminus
AL549_07265	PF01751	Toprim domain
AL549_07265	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_07270	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL549_07270	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL549_07275	PF13180	PDZ domain
AL549_07275	PF13365	Trypsin-like peptidase domain
AL549_07280	PF00595	PDZ domain (Also known as DHR or GLGF)
AL549_07280	PF13180	PDZ domain
AL549_07280	PF13365	Trypsin-like peptidase domain
AL549_07285	PF06295	AL549_07285
AL549_07290	PF03969	AFG1-like ATPase
AL549_07295	PF00572	Ribosomal protein L13
AL549_07300	PF00380	Ribosomal protein S9/S16
AL549_07305	PF00355	Rieske [2Fe-2S] domain
AL549_07305	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AL549_07310	PF00032	Cytochrome b(C-terminal)/b6/petD
AL549_07310	PF00033	Cytochrome b(N-terminal)/b6/petB
AL549_07315	PF02167	Cytochrome C1 family
AL549_07320	PF00043	Glutathione S-transferase, C-terminal domain
AL549_07320	PF13417	Glutathione S-transferase, N-terminal domain
AL549_07325	PF04386	Stringent starvation protein B
AL549_07330	PF04972	BON domain
AL549_07335	PF13580	SIS domain
AL549_07340	PF02021	Uncharacterised protein family UPF0102
AL549_07345	PF04348	LppC putative lipoprotein
AL549_07350	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_07360	PF01795	MraW methylase family
AL549_07365	PF04999	AL549_07365
AL549_07370	PF00905	Penicillin binding protein transpeptidase domain
AL549_07370	PF03717	Penicillin-binding Protein dimerisation domain
AL549_07375	PF01225	Mur ligase family, catalytic domain
AL549_07375	PF02875	Mur ligase family, glutamate ligase domain
AL549_07375	PF08245	Mur ligase middle domain
AL549_07380	PF01225	Mur ligase family, catalytic domain
AL549_07380	PF02875	Mur ligase family, glutamate ligase domain
AL549_07380	PF08245	Mur ligase middle domain
AL549_07385	PF00953	Glycosyl transferase family 4
AL549_07385	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AL549_07390	PF02875	Mur ligase family, glutamate ligase domain
AL549_07390	PF08245	Mur ligase middle domain
AL549_07395	PF01098	AL549_07395
AL549_07400	PF03033	Glycosyltransferase family 28 N-terminal domain
AL549_07400	PF04101	Glycosyltransferase family 28 C-terminal domain
AL549_07405	PF01225	Mur ligase family, catalytic domain
AL549_07405	PF02875	Mur ligase family, glutamate ligase domain
AL549_07405	PF08245	Mur ligase middle domain
AL549_07410	PF03799	Cell division protein FtsQ
AL549_07410	PF08478	POTRA domain, FtsQ-type
AL549_07415	PF02491	SHS2 domain inserted in FTSA
AL549_07415	PF14450	Cell division protein FtsA
AL549_07420	PF00091	Tubulin/FtsZ family, GTPase domain
AL549_07420	PF12327	FtsZ family, C-terminal domain
AL549_07425	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AL549_07430	PF05258	AL549_07430
AL549_07435	PF01043	SecA preprotein cross-linking domain
AL549_07435	PF02810	SEC-C motif
AL549_07435	PF07516	SecA Wing and Scaffold domain
AL549_07435	PF07517	SecA DEAD-like domain
AL549_07440	PF00293	NUDIX domain
AL549_07445	PF01113	Dihydrodipicolinate reductase, N-terminus
AL549_07445	PF05173	Dihydrodipicolinate reductase, C-terminus
AL549_07450	PF00117	Glutamine amidotransferase class-I
AL549_07450	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AL549_07455	PF02142	MGS-like domain
AL549_07455	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL549_07455	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL549_07470	PF01925	AL549_07470
AL549_07475	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_07475	PF03466	LysR substrate binding domain
AL549_07480	PF03458	AL549_07480
AL549_07485	PF01497	Periplasmic binding protein
AL549_07490	PF03186	AL549_07490
AL549_07495	PF01048	Phosphorylase superfamily
AL549_07500	PF07386	AL549_07500
AL549_07505	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_07505	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL549_07510	PF00310	Glutamine amidotransferases class-II
AL549_07510	PF01493	GXGXG motif
AL549_07510	PF01645	Conserved region in glutamate synthase
AL549_07510	PF04898	Glutamate synthase central domain
AL549_07515	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_07515	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AL549_07520	PF00310	Glutamine amidotransferases class-II
AL549_07520	PF01493	GXGXG motif
AL549_07520	PF01645	Conserved region in glutamate synthase
AL549_07520	PF04898	Glutamate synthase central domain
AL549_07525	PF04055	Radical SAM superfamily
AL549_07525	PF16199	AL549_07525
AL549_07530	PF00990	GGDEF domain
AL549_07530	PF08448	PAS fold
AL549_07535	PF00072	Response regulator receiver domain
AL549_07535	PF00512	His Kinase A (phospho-acceptor) domain
AL549_07535	PF01627	Hpt domain
AL549_07535	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_07535	PF08448	PAS fold
AL549_07545	PF00072	Response regulator receiver domain
AL549_07545	PF00486	Transcriptional regulatory protein, C terminal
AL549_07550	PF11697	AL549_07550
AL549_07555	PF03737	Demethylmenaquinone methyltransferase
AL549_07565	PF00696	Amino acid kinase family
AL549_07565	PF00742	Homoserine dehydrogenase
AL549_07565	PF01842	ACT domain
AL549_07565	PF03447	Homoserine dehydrogenase, NAD binding domain
AL549_07570	PF00288	GHMP kinases N terminal domain
AL549_07570	PF08544	GHMP kinases C terminal
AL549_07575	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_07575	PF14821	Threonine synthase N terminus
AL549_07580	PF01228	Glycine radical
AL549_07585	PF01261	Xylose isomerase-like TIM barrel
AL549_07590	PF03167	Uracil DNA glycosylase superfamily
AL549_07595	PF01814	Hemerythrin HHE cation binding domain
AL549_07600	PF12065	AL549_07600
AL549_07605	PF01235	AL549_07605
AL549_07610	PF03883	AL549_07610
AL549_07615	PF00270	DEAD/DEAH box helicase
AL549_07615	PF00271	Helicase conserved C-terminal domain
AL549_07620	PF05175	Methyltransferase small domain
AL549_07625	PF05525	AL549_07625
AL549_07630	PF00258	Flavodoxin
AL549_07635	PF00589	Phage integrase family
AL549_07635	PF02899	Phage integrase, N-terminal SAM-like domain
AL549_07640	PF10411	Disulfide bond isomerase protein N-terminus
AL549_07640	PF13098	Thioredoxin-like domain
AL549_07645	PF01368	DHH family
AL549_07645	PF02272	DHHA1 domain
AL549_07655	PF00152	tRNA synthetases class II (D, K and N)
AL549_07655	PF01336	OB-fold nucleic acid binding domain
AL549_07660	PF00158	Sigma-54 interaction domain
AL549_07660	PF02954	Bacterial regulatory protein, Fis family
AL549_07670	PF00248	Aldo/keto reductase family
AL549_07680	PF02976	DNA mismatch repair enzyme MutH
AL549_07685	PF00293	NUDIX domain
AL549_07690	PF00391	PEP-utilising enzyme, mobile domain
AL549_07690	PF01590	GAF domain
AL549_07690	PF02896	PEP-utilising enzyme, TIM barrel domain
AL549_07690	PF05524	PEP-utilising enzyme, N-terminal
AL549_07695	PF01925	AL549_07695
AL549_07700	PF01790	AL549_07700
AL549_07705	PF00303	Thymidylate synthase
AL549_07710	PF08014	AL549_07710
AL549_07715	PF02690	AL549_07715
AL549_07720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_07720	PF03466	LysR substrate binding domain
AL549_07725	PF01022	Bacterial regulatory protein, arsR family
AL549_07730	PF01649	Ribosomal protein S20
AL549_07735	PF03023	AL549_07735
AL549_07740	PF01687	Riboflavin kinase
AL549_07740	PF06574	FAD synthetase
AL549_07745	PF00133	tRNA synthetases class I (I, L, M and V)
AL549_07745	PF06827	Zinc finger found in FPG and IleRS
AL549_07745	PF08264	Anticodon-binding domain of tRNA
AL549_07750	PF01252	AL549_07750
AL549_07755	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_07760	PF02401	LytB protein
AL549_07765	PF00072	Response regulator receiver domain
AL549_07765	PF04397	LytTr DNA-binding domain
AL549_07770	PF06580	AL549_07770
AL549_07770	PF07694	5TMR of 5TMR-LYT
AL549_07770	PF13492	GAF domain
AL549_07775	PF02554	AL549_07775
AL549_07775	PF13722	AL549_07775
AL549_07785	PF10973	AL549_07785
AL549_07790	PF00999	Sodium/hydrogen exchanger family
AL549_07790	PF02254	TrkA-N domain
AL549_07795	PF03702	Uncharacterised protein family (UPF0075)
AL549_07800	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL549_07805	PF00793	DAHP synthetase I family
AL549_07810	PF01817	Chorismate mutase type II
AL549_07810	PF02153	Prephenate dehydrogenase
AL549_07815	PF01551	Peptidase family M23
AL549_07820	PF07238	PilZ domain
AL549_07825	PF00005	ABC transporter
AL549_07825	PF12848	ABC transporter
AL549_07830	PF01464	Transglycosylase SLT domain
AL549_07830	PF14718	Soluble lytic murein transglycosylase L domain
AL549_07835	PF01371	Trp repressor protein
AL549_07840	PF01931	Protein of unknown function DUF84
AL549_07845	PF00800	Prephenate dehydratase
AL549_07845	PF01817	Chorismate mutase type II
AL549_07850	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL549_07855	PF13525	Outer membrane lipoprotein
AL549_07860	PF00849	RNA pseudouridylate synthase
AL549_07860	PF01479	S4 domain
AL549_07865	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL549_07870	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_07870	PF02861	Clp amino terminal domain
AL549_07870	PF07724	AAA domain (Cdc48 subfamily)
AL549_07870	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_07905	PF03411	Penicillin-insensitive murein endopeptidase
AL549_07910	PF00037	4Fe-4S binding domain
AL549_07915	PF01136	AL549_07915
AL549_07915	PF16325	AL549_07915
AL549_07920	PF04381	Putative exonuclease, RdgC
AL549_07925	PF00072	Response regulator receiver domain
AL549_07925	PF00486	Transcriptional regulatory protein, C terminal
AL549_07930	PF00512	His Kinase A (phospho-acceptor) domain
AL549_07930	PF00989	PAS fold
AL549_07930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_07930	PF11808	AL549_07930
AL549_07935	PF12849	PBP superfamily domain
AL549_07940	PF02541	Ppx/GppA phosphatase family
AL549_07945	PF02503	Polyphosphate kinase middle domain
AL549_07945	PF13089	Polyphosphate kinase N-terminal domain
AL549_07945	PF13090	Polyphosphate kinase C-terminal domain
AL549_07950	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_07955	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_07960	PF00005	ABC transporter
AL549_07965	PF01895	PhoU domain
AL549_07985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_07985	PF03466	LysR substrate binding domain
AL549_07990	PF03976	Polyphosphate kinase 2 (PPK2)
AL549_07995	PF03932	CutC family
AL549_08000	PF00578	AhpC/TSA family
AL549_08000	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL549_08005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_08005	PF03466	LysR substrate binding domain
AL549_08010	PF01274	Malate synthase
AL549_08015	PF00463	Isocitrate lyase family
AL549_08020	PF00571	CBS domain
AL549_08025	PF00089	Trypsin
AL549_08030	PF02547	Queuosine biosynthesis protein
AL549_08035	PF01702	Queuine tRNA-ribosyltransferase
AL549_08040	PF02699	Preprotein translocase subunit
AL549_08045	PF02355	Protein export membrane protein
AL549_08045	PF07549	SecD/SecF GG Motif
AL549_08045	PF13721	SecD export protein N-terminal TM region
AL549_08050	PF02355	Protein export membrane protein
AL549_08050	PF07549	SecD/SecF GG Motif
AL549_08065	PF00459	Inositol monophosphatase family
AL549_08070	PF00588	SpoU rRNA Methylase family
AL549_08075	PF02082	Transcriptional regulator
AL549_08080	PF00266	Aminotransferase class-V
AL549_08085	PF01592	NifU-like N terminal domain
AL549_08090	PF01521	Iron-sulphur cluster biosynthesis
AL549_08095	PF00226	DnaJ domain
AL549_08095	PF07743	HSCB C-terminal oligomerisation domain
AL549_08100	PF00012	Hsp70 protein
AL549_08105	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_08110	PF04384	Iron-sulphur cluster assembly
AL549_08115	PF00883	Cytosol aminopeptidase family, catalytic domain
AL549_08115	PF12404	AL549_08115
AL549_08120	PF00334	Nucleoside diphosphate kinase
AL549_08125	PF04055	Radical SAM superfamily
AL549_08130	PF13413	Helix-turn-helix domain
AL549_08130	PF13464	AL549_08130
AL549_08135	PF04551	GcpE protein
AL549_08140	PF03129	Anticodon binding domain
AL549_08140	PF13393	Histidyl-tRNA synthetase
AL549_08145	PF09976	Tetratricopeptide repeat
AL549_08150	PF13360	PQQ-like domain
AL549_08155	PF01926	50S ribosome-binding GTPase
AL549_08155	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AL549_08165	PF00990	GGDEF domain
AL549_08165	PF13185	GAF domain
AL549_08170	PF07191	zinc-ribbons
AL549_08175	PF02601	AL549_08175
AL549_08175	PF13742	AL549_08175
AL549_08180	PF00478	IMP dehydrogenase / GMP reductase domain
AL549_08180	PF00571	CBS domain
AL549_08185	PF00117	Glutamine amidotransferase class-I
AL549_08185	PF00958	GMP synthase C terminal domain
AL549_08185	PF02540	NAD synthase
AL549_08190	PF00182	Chitinase class I
AL549_08190	PF02839	Carbohydrate binding domain
AL549_08195	PF01184	AL549_08195
AL549_08200	PF01235	AL549_08200
AL549_08205	PF01266	FAD dependent oxidoreductase
AL549_08210	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_08210	PF03466	LysR substrate binding domain
AL549_08215	PF00805	Pentapeptide repeats (8 copies)
AL549_08215	PF07885	Ion channel
AL549_08220	PF02028	BCCT family transporter
AL549_08225	PF09335	AL549_08225
AL549_08230	PF01300	Telomere recombination
AL549_08230	PF03481	Putative GTP-binding controlling metal-binding
AL549_08235	PF09335	AL549_08235
AL549_08240	PF02222	ATP-grasp domain
AL549_08250	PF05742	AL549_08250
AL549_08255	PF04945	YHS domain
AL549_08260	PF01553	Acyltransferase
AL549_08260	PF13444	Acetyltransferase (GNAT) domain
AL549_08265	PF01381	Helix-turn-helix
AL549_08270	PF07804	HipA-like C-terminal domain
AL549_08280	PF01668	SmpB protein
AL549_08285	PF03364	Polyketide cyclase / dehydrase and lipid transport
AL549_08290	PF03658	RnfH family Ubiquitin
AL549_08295	PF04355	SmpA / OmlA family
AL549_08300	PF02463	RecF/RecN/SMC N terminal domain
AL549_08305	PF01513	ATP-NAD kinase
AL549_08310	PF01025	GrpE
AL549_08315	PF00375	Sodium:dicarboxylate symporter family
AL549_08330	PF01297	Periplasmic solute binding protein family
AL549_08335	PF00950	AL549_08335
AL549_08340	PF00012	Hsp70 protein
AL549_08345	PF00226	DnaJ domain
AL549_08345	PF00684	DnaJ central domain
AL549_08345	PF01556	DnaJ C terminal domain
AL549_08350	PF07963	Prokaryotic N-terminal methylation motif
AL549_08350	PF16732	AL549_08350
AL549_08355	PF07963	Prokaryotic N-terminal methylation motif
AL549_08355	PF12019	Type II transport protein GspH
AL549_08370	PF07963	Prokaryotic N-terminal methylation motif
AL549_08375	PF03806	AL549_08375
AL549_08380	PF00756	Putative esterase
AL549_08385	PF00107	Zinc-binding dehydrogenase
AL549_08385	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_08390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_08390	PF03466	LysR substrate binding domain
AL549_08395	PF14437	AL549_08395
AL549_08400	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_08400	PF01464	Transglycosylase SLT domain
AL549_08410	PF02769	AIR synthase related protein, C-terminal domain
AL549_08410	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AL549_08415	PF12286	AL549_08415
AL549_08425	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_08430	PF11810	AL549_08430
AL549_08435	PF01546	Peptidase family M20/M25/M40
AL549_08435	PF07687	Peptidase dimerisation domain
AL549_08440	PF00860	Permease family
AL549_08445	PF00156	Phosphoribosyl transferase domain
AL549_08450	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
AL549_08455	PF07417	Transcriptional regulator Crl
AL549_08460	PF00696	Amino acid kinase family
AL549_08460	PF01472	PUA domain
AL549_08465	PF00171	Aldehyde dehydrogenase family
AL549_08470	PF03477	ATP cone domain
AL549_08475	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_08475	PF01872	RibD C-terminal domain
AL549_08480	PF00677	Lumazine binding domain
AL549_08485	PF00925	GTP cyclohydrolase II
AL549_08485	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL549_08490	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AL549_08495	PF01029	NusB family
AL549_08500	PF00586	AIR synthase related protein, N-terminal domain
AL549_08500	PF02769	AIR synthase related protein, C-terminal domain
AL549_08505	PF04608	Phosphatidylglycerophosphatase A
AL549_08510	PF02779	Transketolase, pyrimidine binding domain
AL549_08510	PF02780	Transketolase, C-terminal domain
AL549_08510	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL549_08515	PF00348	Polyprenyl synthetase
AL549_08520	PF02609	Exonuclease VII small subunit
AL549_08525	PF01618	AL549_08525
AL549_08530	PF00691	OmpA family
AL549_08530	PF13677	AL549_08530
AL549_08535	PF02568	Thiamine biosynthesis protein (ThiI)
AL549_08535	PF02926	THUMP domain
AL549_08540	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_08540	PF03466	LysR substrate binding domain
AL549_08545	PF12697	Alpha/beta hydrolase family
AL549_08550	PF04241	AL549_08550
AL549_08555	PF01728	FtsJ-like methyltransferase
AL549_08560	PF01223	DNA/RNA non-specific endonuclease
AL549_08565	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL549_08565	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL549_08570	PF03641	Possible lysine decarboxylase
AL549_08570	PF11892	Domain of unknown function (DUF3412)
AL549_08570	PF14793	Domain of unknown function (DUF4478)
AL549_08575	PF00990	GGDEF domain
AL549_08580	PF13424	Tetratricopeptide repeat
AL549_08585	PF14489	QueF-like protein
AL549_08585	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AL549_08590	PF07348	Syd protein (SUKH-2)
AL549_08595	PF10071	AL549_08595
AL549_08600	PF03180	NLPA lipoprotein
AL549_08605	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_08610	PF00005	ABC transporter
AL549_08610	PF09383	NIL domain
AL549_08615	PF13242	HAD-hyrolase-like
AL549_08620	PF00356	Bacterial regulatory proteins, lacI family
AL549_08620	PF13377	Periplasmic binding protein-like domain
AL549_08625	PF00367	phosphotransferase system, EIIB
AL549_08625	PF02378	Phosphotransferase system, EIIC
AL549_08630	PF00128	Alpha amylase, catalytic domain
AL549_08630	PF16657	AL549_08630
AL549_08635	PF02588	AL549_08635
AL549_08640	PF00464	Serine hydroxymethyltransferase
AL549_08650	PF04055	Radical SAM superfamily
AL549_08650	PF16881	AL549_08650
AL549_08655	PF03099	Biotin/lipoate A/B protein ligase family
AL549_08660	PF04359	Protein of unknown function (DUF493)
AL549_08665	PF00768	D-alanyl-D-alanine carboxypeptidase
AL549_08665	PF07943	Penicillin-binding protein 5, C-terminal domain
AL549_08670	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AL549_08670	PF05036	Sporulation related domain
AL549_08675	PF01098	AL549_08675
AL549_08680	PF00905	Penicillin binding protein transpeptidase domain
AL549_08680	PF03717	Penicillin-binding Protein dimerisation domain
AL549_08685	PF02590	Predicted SPOUT methyltransferase
AL549_08690	PF02410	Oligomerisation domain
AL549_08695	PF06144	DNA polymerase III, delta subunit
AL549_08695	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
AL549_08700	PF04390	Lipopolysaccharide-assembly
AL549_08705	PF00133	tRNA synthetases class I (I, L, M and V)
AL549_08705	PF08264	Anticodon-binding domain of tRNA
AL549_08705	PF13603	Leucyl-tRNA synthetase, Domain 2
AL549_08710	PF07295	AL549_08710
AL549_08715	PF00795	Carbon-nitrogen hydrolase
AL549_08720	PF00571	CBS domain
AL549_08720	PF03471	Transporter associated domain
AL549_08725	PF02130	Uncharacterized protein family UPF0054
AL549_08730	PF02562	PhoH-like protein
AL549_08735	PF00919	Uncharacterized protein family UPF0004
AL549_08735	PF01938	TRAM domain
AL549_08735	PF04055	Radical SAM superfamily
AL549_08740	PF01494	FAD binding domain
AL549_08820	PF01926	50S ribosome-binding GTPase
AL549_08820	PF06071	Protein of unknown function (DUF933)
AL549_08825	PF01195	Peptidyl-tRNA hydrolase
AL549_08830	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL549_08830	PF14572	Phosphoribosyl synthetase-associated domain
AL549_08835	PF00288	GHMP kinases N terminal domain
AL549_08835	PF08544	GHMP kinases C terminal
AL549_08840	PF03550	Outer membrane lipoprotein LolB
AL549_08845	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AL549_08845	PF01488	Shikimate / quinate 5-dehydrogenase
AL549_08845	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AL549_08850	PF00472	RF-1 domain
AL549_08850	PF03462	PCRF domain
AL549_08855	PF13847	Methyltransferase domain
AL549_08860	PF04247	AL549_08860
AL549_08865	PF13369	AL549_08865
AL549_08865	PF13371	Tetratricopeptide repeat
AL549_08870	PF00793	DAHP synthetase I family
AL549_08875	PF00149	Calcineurin-like phosphoesterase
AL549_08875	PF02872	5'-nucleotidase, C-terminal domain
AL549_08880	PF04073	Aminoacyl-tRNA editing domain
AL549_08885	PF00849	RNA pseudouridylate synthase
AL549_08885	PF01479	S4 domain
AL549_08890	PF01713	Smr domain
AL549_08900	PF01963	AL549_08900
AL549_08905	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL549_08905	PF02838	Glycosyl hydrolase family 20, domain 2
AL549_08905	PF03173	Putative carbohydrate binding domain
AL549_08905	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL549_08910	PF04214	AL549_08910
AL549_08915	PF00122	E1-E2 ATPase
AL549_08915	PF00403	Heavy-metal-associated domain
AL549_08915	PF00702	haloacid dehalogenase-like hydrolase
AL549_08920	PF13609	Gram-negative porin
AL549_08925	PF09829	AL549_08925
AL549_08930	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL549_08945	PF16538	AL549_08945
AL549_08945	PF16539	AL549_08945
AL549_08945	PF16548	AL549_08945
AL549_08955	PF02169	LPP20 lipoprotein
AL549_08960	PF01609	Transposase DDE domain
AL549_08960	PF13006	AL549_08960
AL549_08965	PF05130	FlgN protein
AL549_08970	PF04316	Anti-sigma-28 factor, FlgM
AL549_08975	PF13144	SAF-like
AL549_08980	PF00072	Response regulator receiver domain
AL549_08980	PF01584	CheW-like domain
AL549_08985	PF01739	CheR methyltransferase, SAM binding domain
AL549_08985	PF03705	CheR methyltransferase, all-alpha domain
AL549_08995	PF00460	Flagella basal body rod protein
AL549_08995	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_09000	PF03963	AL549_09000
AL549_09000	PF13860	FlgD Ig-like domain
AL549_09000	PF13861	FlgD Tudor-like domain
AL549_09005	PF00460	Flagella basal body rod protein
AL549_09005	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_09005	PF07559	Flagellar basal body protein FlaE
AL549_09010	PF00460	Flagella basal body rod protein
AL549_09010	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_09015	PF00460	Flagella basal body rod protein
AL549_09015	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_09020	PF02107	AL549_09020
AL549_09025	PF02119	AL549_09025
AL549_09030	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL549_09030	PF10135	AL549_09030
AL549_09035	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL549_09040	PF00669	Bacterial flagellin N-terminal helical region
AL549_09045	PF00669	Bacterial flagellin N-terminal helical region
AL549_09045	PF00700	Bacterial flagellin C-terminal helical region
AL549_09045	PF07196	Flagellin hook IN motif
AL549_09055	PF00669	Bacterial flagellin N-terminal helical region
AL549_09055	PF00700	Bacterial flagellin C-terminal helical region
AL549_09055	PF07196	Flagellin hook IN motif
AL549_09060	PF00669	Bacterial flagellin N-terminal helical region
AL549_09060	PF00700	Bacterial flagellin C-terminal helical region
AL549_09060	PF07196	Flagellin hook IN motif
AL549_09065	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AL549_09070	PF00391	PEP-utilising enzyme, mobile domain
AL549_09070	PF02896	PEP-utilising enzyme, TIM barrel domain
AL549_09070	PF05524	PEP-utilising enzyme, N-terminal
AL549_09075	PF00381	PTS HPr component phosphorylation site
AL549_09080	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_09085	PF07264	Etoposide-induced protein 2
AL549_09090	PF04354	ZipA, C-terminal FtsZ-binding domain
AL549_09095	PF00533	BRCA1 C Terminus (BRCT) domain
AL549_09095	PF01653	NAD-dependent DNA ligase adenylation domain
AL549_09095	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AL549_09095	PF03120	NAD-dependent DNA ligase OB-fold domain
AL549_09095	PF12826	Helix-hairpin-helix motif
AL549_09095	PF14520	Helix-hairpin-helix domain
AL549_09105	PF01957	NfeD-like C-terminal, partner-binding
AL549_09110	PF01145	SPFH domain / Band 7 family
AL549_09110	PF16200	AL549_09110
AL549_09115	PF00085	Thioredoxin
AL549_09115	PF14559	Tetratricopeptide repeat
AL549_09115	PF14561	Tetratricopeptide repeat
AL549_09120	PF00106	short chain dehydrogenase
AL549_09125	PF01370	NAD dependent epimerase/dehydratase family
AL549_09125	PF08338	Domain of unknown function (DUF1731)
AL549_09130	PF07556	AL549_09130
AL549_09135	PF07556	AL549_09135
AL549_09145	PF00571	CBS domain
AL549_09150	PF12850	Calcineurin-like phosphoesterase superfamily domain
AL549_09155	PF10262	Rdx family
AL549_09160	PF01925	AL549_09160
AL549_09165	PF17323	AL549_09165
AL549_09170	PF00486	Transcriptional regulatory protein, C terminal
AL549_09175	PF00183	Hsp90 protein
AL549_09175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_09180	PF00406	Adenylate kinase
AL549_09180	PF05191	Adenylate kinase, active site lid
AL549_09185	PF00762	Ferrochelatase
AL549_09190	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_09195	PF00854	POT family
AL549_09200	PF02357	Transcription termination factor nusG
AL549_09205	PF00733	Asparagine synthase
AL549_09205	PF13537	Glutamine amidotransferase domain
AL549_09210	PF00999	Sodium/hydrogen exchanger family
AL549_09210	PF02254	TrkA-N domain
AL549_09215	PF00480	ROK family
AL549_09220	PF01979	Amidohydrolase family
AL549_09225	PF00367	phosphotransferase system, EIIB
AL549_09225	PF02378	Phosphotransferase system, EIIC
AL549_09230	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL549_09230	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AL549_09235	PF01475	Ferric uptake regulator family
AL549_09240	PF14539	Domain of unknown function (DUF4442)
AL549_09245	PF00258	Flavodoxin
AL549_09250	PF10981	AL549_09250
AL549_09255	PF12697	Alpha/beta hydrolase family
AL549_09260	PF03925	SeqA protein
AL549_09260	PF17206	AL549_09260
AL549_09265	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_09265	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_09265	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_09265	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_09270	PF08348	AL549_09270
AL549_09270	PF13309	AL549_09270
AL549_09275	PF01042	Endoribonuclease L-PSP
AL549_09280	PF00375	Sodium:dicarboxylate symporter family
AL549_09285	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_09285	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_09290	PF08907	AL549_09290
AL549_09295	PF01784	NIF3 (NGG1p interacting factor 3)
AL549_09300	PF00285	Citrate synthase
AL549_09305	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL549_09315	PF00890	FAD binding domain
AL549_09315	PF02910	Fumarate reductase flavoprotein C-term
AL549_09320	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL549_09320	PF13534	4Fe-4S dicluster domain
AL549_09325	PF00676	Dehydrogenase E1 component
AL549_09325	PF02779	Transketolase, pyrimidine binding domain
AL549_09325	PF16078	AL549_09325
AL549_09325	PF16870	AL549_09325
AL549_09330	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL549_09330	PF00364	Biotin-requiring enzyme
AL549_09330	PF02817	e3 binding domain
AL549_09335	PF00549	CoA-ligase
AL549_09335	PF08442	ATP-grasp domain
AL549_09340	PF00549	CoA-ligase
AL549_09340	PF02629	CoA binding domain
AL549_09345	PF00950	AL549_09345
AL549_09350	PF00005	ABC transporter
AL549_09355	PF01297	Periplasmic solute binding protein family
AL549_09360	PF12833	Helix-turn-helix domain
AL549_09365	PF04023	FeoA domain
AL549_09370	PF02421	Ferrous iron transport protein B
AL549_09370	PF07664	AL549_09370
AL549_09370	PF07670	Nucleoside recognition
AL549_09375	PF09012	FeoC like transcriptional regulator
AL549_09380	PF01230	HIT domain
AL549_09385	PF00750	tRNA synthetases class I (R)
AL549_09385	PF03485	Arginyl tRNA synthetase N terminal domain
AL549_09385	PF05746	DALR anticodon binding domain
AL549_09390	PF06185	YecM protein
AL549_09395	PF00551	Formyl transferase
AL549_09395	PF01842	ACT domain
AL549_09405	PF04851	Type III restriction enzyme, res subunit
AL549_09405	PF13307	Helicase C-terminal domain
AL549_09410	PF00814	Glycoprotease family
AL549_09420	PF03843	AL549_09420
AL549_09425	PF00561	alpha/beta hydrolase fold
AL549_09430	PF00501	AMP-binding enzyme
AL549_09430	PF13193	AMP-binding enzyme C-terminal domain
AL549_09435	PF00570	HRDC domain
AL549_09435	PF01612	3'-5' exonuclease
AL549_09440	PF03776	Septum formation topological specificity factor MinE
AL549_09445	PF13614	AAA domain
AL549_09450	PF03775	Septum formation inhibitor MinC, C-terminal domain
AL549_09450	PF05209	Septum formation inhibitor MinC, N-terminal domain
AL549_09455	PF05166	YcgL domain
AL549_09460	PF13406	Transglycosylase SLT domain
AL549_09465	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_09465	PF03466	LysR substrate binding domain
AL549_09470	PF01773	Na+ dependent nucleoside transporter N-terminus
AL549_09470	PF07662	Na+ dependent nucleoside transporter C-terminus
AL549_09470	PF07670	Nucleoside recognition
AL549_09480	PF00072	Response regulator receiver domain
AL549_09480	PF00486	Transcriptional regulatory protein, C terminal
AL549_09485	PF00512	His Kinase A (phospho-acceptor) domain
AL549_09495	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_09495	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_09500	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_09510	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_09510	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_09515	PF11659	AL549_09515
AL549_09520	PF03176	MMPL family
AL549_09525	PF03548	Outer membrane lipoprotein carrier protein LolA
AL549_09530	PF13279	Thioesterase-like superfamily
AL549_09535	PF00221	Aromatic amino acid lyase
AL549_09540	PF00535	Glycosyl transferase family 2
AL549_09540	PF03279	AL549_09540
AL549_09550	PF00501	AMP-binding enzyme
AL549_09555	PF04279	AL549_09555
AL549_09560	PF00550	Phosphopantetheine attachment site
AL549_09565	PF00550	Phosphopantetheine attachment site
AL549_09570	PF01553	Acyltransferase
AL549_09575	PF13723	AL549_09575
AL549_09585	PF00891	O-methyltransferase
AL549_09590	PF01494	FAD binding domain
AL549_09595	PF05547	AL549_09595
AL549_09605	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_09605	PF00672	HAMP domain
AL549_09610	PF02696	AL549_09610
AL549_09615	PF00072	Response regulator receiver domain
AL549_09615	PF00486	Transcriptional regulatory protein, C terminal
AL549_09620	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_09625	PF01547	Bacterial extracellular solute-binding protein
AL549_09630	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_09635	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_09640	PF00005	ABC transporter
AL549_09645	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_09650	PF04290	AL549_09650
AL549_09655	PF06808	AL549_09655
AL549_09660	PF12969	Domain of Unknown Function with PDB structure (DUF3857)
AL549_09665	PF00072	Response regulator receiver domain
AL549_09665	PF00158	Sigma-54 interaction domain
AL549_09665	PF02954	Bacterial regulatory protein, Fis family
AL549_09670	PF00512	His Kinase A (phospho-acceptor) domain
AL549_09670	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_09670	PF02743	Cache domain
AL549_09675	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_09675	PF05697	Bacterial trigger factor protein (TF)
AL549_09675	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL549_09680	PF00574	Clp protease
AL549_09685	PF06689	ClpX C4-type zinc finger
AL549_09685	PF07724	AAA domain (Cdc48 subfamily)
AL549_09685	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_09690	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_09690	PF02190	ATP-dependent protease La (LON) domain
AL549_09690	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL549_09695	PF00216	Bacterial DNA-binding protein
AL549_09700	PF13616	PPIC-type PPIASE domain
AL549_09700	PF13624	SurA N-terminal domain
AL549_09705	PF12836	Helix-hairpin-helix motif
AL549_09710	PF01694	Rhomboid family
AL549_09715	PF03942	AL549_09715
AL549_09720	PF01966	HD domain
AL549_09720	PF13286	Phosphohydrolase-associated domain
AL549_09725	PF13023	HD domain
AL549_09730	PF00155	Aminotransferase class I and II
AL549_09735	PF00425	chorismate binding enzyme
AL549_09740	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL549_09740	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL549_09740	PF16582	AL549_09740
AL549_09745	PF12697	Alpha/beta hydrolase family
AL549_09750	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_09755	PF13378	Enolase C-terminal domain-like
AL549_09760	PF00501	AMP-binding enzyme
AL549_09770	PF03601	AL549_09770
AL549_09775	PF01553	Acyltransferase
AL549_09775	PF07690	Major Facilitator Superfamily
AL549_09780	PF13305	WHG domain
AL549_09785	PF04280	Tim44-like domain
AL549_09785	PF07466	AL549_09785
AL549_09820	PF16576	AL549_09820
AL549_09825	PF00873	AcrB/AcrD/AcrF family
AL549_09830	PF13505	Outer membrane protein beta-barrel domain
AL549_09835	PF06844	Protein of unknown function (DUF1244)
AL549_09840	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_09845	PF01037	AsnC family
AL549_09845	PF13412	Winged helix-turn-helix DNA-binding
AL549_09855	PF13622	Thioesterase-like superfamily
AL549_09860	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL549_09865	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL549_09875	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_09875	PF00990	GGDEF domain
AL549_09885	PF07969	Amidohydrolase family
AL549_09900	PF16130	AL549_09900
AL549_09905	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_09905	PF17201	AL549_09905
AL549_09910	PF01263	Aldose 1-epimerase
AL549_09915	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_09915	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_09920	PF01641	SelR domain
AL549_09925	PF11207	AL549_09925
AL549_09930	PF07023	AL549_09930
AL549_09935	PF00710	Asparaginase
AL549_09940	PF01343	Peptidase family S49
AL549_09945	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL549_09945	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_09950	PF00881	Nitroreductase family
AL549_09955	PF01131	DNA topoisomerase
AL549_09955	PF01751	Toprim domain
AL549_09960	PF00850	Histone deacetylase domain
AL549_09965	PF00072	Response regulator receiver domain
AL549_09965	PF00512	His Kinase A (phospho-acceptor) domain
AL549_09965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_09965	PF08447	PAS fold
AL549_09970	PF00072	Response regulator receiver domain
AL549_09970	PF00990	GGDEF domain
AL549_09975	PF13091	PLD-like domain
AL549_09985	PF04074	Domain of unknown function (DUF386)
AL549_09990	PF02386	Cation transport protein
AL549_09995	PF02080	TrkA-C domain
AL549_09995	PF02254	TrkA-N domain
AL549_10005	PF00884	Sulfatase
AL549_10005	PF11893	AL549_10005
AL549_10010	PF07208	Protein of unknown function (DUF1414)
AL549_10015	PF04245	AL549_10015
AL549_10020	PF01627	Hpt domain
AL549_10030	PF03553	AL549_10030
AL549_10035	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL549_10035	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL549_10040	PF07963	Prokaryotic N-terminal methylation motif
AL549_10045	PF00520	Ion transport protein
AL549_10050	PF01914	AL549_10050
AL549_10055	PF00171	Aldehyde dehydrogenase family
AL549_10055	PF00465	Iron-containing alcohol dehydrogenase
AL549_10060	PF00106	short chain dehydrogenase
AL549_10065	PF11993	AL549_10065
AL549_10070	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL549_10070	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL549_10075	PF00462	Glutaredoxin
AL549_10080	PF13743	Thioredoxin
AL549_10085	PF03553	AL549_10085
AL549_10085	PF13726	AL549_10085
AL549_10090	PF00929	Exonuclease
AL549_10095	PF00691	OmpA family
AL549_10100	PF10952	AL549_10100
AL549_10105	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_10110	PF00633	Helix-hairpin-helix motif
AL549_10110	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL549_10110	PF10576	Iron-sulfur binding domain of endonuclease III
AL549_10115	PF02508	AL549_10115
AL549_10120	PF04205	FMN-binding domain
AL549_10125	PF03116	AL549_10125
AL549_10130	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL549_10130	PF10531	SLBB domain
AL549_10130	PF12838	4Fe-4S dicluster domain
AL549_10130	PF13375	RnfC Barrel sandwich hybrid domain
AL549_10135	PF04060	Putative Fe-S cluster
AL549_10135	PF14697	4Fe-4S dicluster domain
AL549_10140	PF02508	AL549_10140
AL549_10150	PF00271	Helicase conserved C-terminal domain
AL549_10150	PF02151	UvrB/uvrC motif
AL549_10150	PF04851	Type III restriction enzyme, res subunit
AL549_10150	PF12344	Ultra-violet resistance protein B
AL549_10155	PF00072	Response regulator receiver domain
AL549_10155	PF00158	Sigma-54 interaction domain
AL549_10155	PF02954	Bacterial regulatory protein, Fis family
AL549_10160	PF01627	Hpt domain
AL549_10165	PF01933	Uncharacterised protein family UPF0052
AL549_10170	PF04055	Radical SAM superfamily
AL549_10170	PF06463	Molybdenum Cofactor Synthesis C
AL549_10170	PF13353	4Fe-4S single cluster domain
AL549_10175	PF00994	Probable molybdopterin binding domain
AL549_10180	PF01967	MoaC family
AL549_10185	PF02597	ThiS family
AL549_10190	PF02391	MoaE protein
AL549_10195	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_10200	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_10205	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_10205	PF12911	AL549_10205
AL549_10210	PF00005	ABC transporter
AL549_10210	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_10215	PF00005	ABC transporter
AL549_10215	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_10220	PF13409	Glutathione S-transferase, N-terminal domain
AL549_10220	PF13410	Glutathione S-transferase, C-terminal domain
AL549_10225	PF16549	AL549_10225
AL549_10230	PF03795	YCII-related domain
AL549_10235	PF03061	Thioesterase superfamily
AL549_10240	PF04279	AL549_10240
AL549_10250	PF00375	Sodium:dicarboxylate symporter family
AL549_10255	PF00290	Tryptophan synthase alpha chain
AL549_10260	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_10265	PF00218	Indole-3-glycerol phosphate synthase
AL549_10265	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AL549_10270	PF00591	Glycosyl transferase family, a/b domain
AL549_10270	PF02885	Glycosyl transferase family, helical bundle domain
AL549_10275	PF00117	Glutamine amidotransferase class-I
AL549_10280	PF00425	chorismate binding enzyme
AL549_10280	PF04715	Anthranilate synthase component I, N terminal region
AL549_10285	PF08056	AL549_10285
AL549_10290	PF02811	PHP domain
AL549_10295	PF01300	Telomere recombination
AL549_10300	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
AL549_10305	PF00849	RNA pseudouridylate synthase
AL549_10305	PF01479	S4 domain
AL549_10310	PF04269	Protein of unknown function, DUF440
AL549_10315	PF01132	Elongation factor P (EF-P) OB domain
AL549_10315	PF08207	Elongation factor P (EF-P) KOW-like domain
AL549_10315	PF09285	Elongation factor P, C-terminal
AL549_10320	PF01909	Nucleotidyltransferase domain
AL549_10325	PF00563	EAL domain
AL549_10325	PF02378	Phosphotransferase system, EIIC
AL549_10330	PF00136	DNA polymerase family B
AL549_10330	PF03104	DNA polymerase family B, exonuclease domain
AL549_10335	PF00072	Response regulator receiver domain
AL549_10335	PF00196	Bacterial regulatory proteins, luxR family
AL549_10340	PF01541	GIY-YIG catalytic domain
AL549_10340	PF02151	UvrB/uvrC motif
AL549_10340	PF08459	UvrC Helix-hairpin-helix N-terminal
AL549_10340	PF14520	Helix-hairpin-helix domain
AL549_10345	PF01066	CDP-alcohol phosphatidyltransferase
AL549_10370	PF00202	Aminotransferase class-III
AL549_10370	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_10375	PF03435	Saccharopine dehydrogenase
AL549_10375	PF16653	AL549_10375
AL549_10385	PF13740	ACT domain
AL549_10390	PF13084	AL549_10390
AL549_10395	PF00994	Probable molybdopterin binding domain
AL549_10400	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_10405	PF00268	Ribonucleotide reductase, small chain
AL549_10410	PF00317	Ribonucleotide reductase, all-alpha domain
AL549_10410	PF02867	Ribonucleotide reductase, barrel domain
AL549_10410	PF03477	ATP cone domain
AL549_10415	PF13489	Methyltransferase domain
AL549_10425	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL549_10425	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL549_10440	PF02335	Cytochrome c552
AL549_10445	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AL549_10445	PF13435	Cytochrome c554 and c-prime
AL549_10450	PF12800	4Fe-4S binding domain
AL549_10450	PF13247	4Fe-4S dicluster domain
AL549_10455	PF03916	AL549_10455
AL549_10460	PF01578	AL549_10460
AL549_10460	PF16327	AL549_10460
AL549_10465	PF08534	Redoxin
AL549_10470	PF03918	Cytochrome C biogenesis protein
AL549_10485	PF01588	Putative tRNA binding domain
AL549_10485	PF09334	tRNA synthetases class I (M)
AL549_10490	PF10609	ParA/MinD ATPase like
AL549_10495	PF00485	Phosphoribulokinase / Uridine kinase family
AL549_10500	PF05170	AL549_10500
AL549_10505	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_10510	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
AL549_10515	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL549_10520	PF00916	AL549_10520
AL549_10520	PF01740	STAS domain
AL549_10525	PF00575	S1 RNA binding domain
AL549_10525	PF10150	Ribonuclease E/G family
AL549_10530	PF00849	RNA pseudouridylate synthase
AL549_10530	PF01479	S4 domain
AL549_10535	PF02545	Maf-like protein
AL549_10540	PF02620	AL549_10540
AL549_10545	PF01783	Ribosomal L32p protein family
AL549_10550	PF02504	Fatty acid synthesis protein
AL549_10555	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL549_10555	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL549_10560	PF00698	Acyl transferase domain
AL549_10565	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_10570	PF00550	Phosphopantetheine attachment site
AL549_10575	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_10575	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_10580	PF01063	Aminotransferase class IV
AL549_10585	PF02618	YceG-like family
AL549_10590	PF02223	Thymidylate kinase
AL549_10595	PF09115	DNA polymerase III, delta subunit, C terminal
AL549_10595	PF13177	DNA polymerase III, delta subunit
AL549_10600	PF01026	TatD related DNase
AL549_10605	PF00367	phosphotransferase system, EIIB
AL549_10605	PF02378	Phosphotransferase system, EIIC
AL549_10615	PF00209	Sodium:neurotransmitter symporter family
AL549_10625	PF01734	Patatin-like phospholipase
AL549_10630	PF00224	Pyruvate kinase, barrel domain
AL549_10630	PF02887	Pyruvate kinase, alpha/beta domain
AL549_10635	PF00480	ROK family
AL549_10640	PF00072	Response regulator receiver domain
AL549_10640	PF01584	CheW-like domain
AL549_10645	PF01336	OB-fold nucleic acid binding domain
AL549_10645	PF02811	PHP domain
AL549_10645	PF07733	Bacterial DNA polymerase III alpha subunit
AL549_10645	PF14579	Helix-hairpin-helix motif
AL549_10650	PF00817	impB/mucB/samB family
AL549_10660	PF00106	short chain dehydrogenase
AL549_10665	PF01343	Peptidase family S49
AL549_10665	PF08496	AL549_10665
AL549_10670	PF02224	Cytidylate kinase
AL549_10675	PF00575	S1 RNA binding domain
AL549_10680	PF00216	Bacterial DNA-binding protein
AL549_10685	PF06305	AL549_10685
AL549_10690	PF13176	Tetratricopeptide repeat
AL549_10690	PF13181	Tetratricopeptide repeat
AL549_10695	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL549_10700	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_10705	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_10710	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_10715	PF00005	ABC transporter
AL549_10720	PF00005	ABC transporter
AL549_10730	PF16313	AL549_10730
AL549_10735	PF01609	Transposase DDE domain
AL549_10735	PF13006	AL549_10735
AL549_10740	PF09375	Imelysin
AL549_10745	PF06537	AL549_10745
AL549_10750	PF09375	Imelysin
AL549_10755	PF07433	AL549_10755
AL549_10760	PF01471	Putative peptidoglycan binding domain
AL549_10760	PF03734	L,D-transpeptidase catalytic domain
AL549_10765	PF05951	AL549_10765
AL549_10770	PF00753	Metallo-beta-lactamase superfamily
AL549_10775	PF11201	AL549_10775
AL549_10785	PF01609	Transposase DDE domain
AL549_10785	PF13006	AL549_10785
AL549_10790	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AL549_10800	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_10800	PF03466	LysR substrate binding domain
AL549_10805	PF13679	AL549_10805
AL549_10810	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL549_10810	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL549_10815	PF01037	AsnC family
AL549_10815	PF13412	Winged helix-turn-helix DNA-binding
AL549_10820	PF01580	FtsK/SpoIIIE family
AL549_10820	PF09397	Ftsk gamma domain
AL549_10820	PF13491	AL549_10820
AL549_10825	PF03548	Outer membrane lipoprotein carrier protein LolA
AL549_10830	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_10830	PF12002	MgsA AAA+ ATPase C terminal
AL549_10830	PF16193	AL549_10830
AL549_10835	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL549_10835	PF02403	Seryl-tRNA synthetase N-terminal domain
AL549_10840	PF00202	Aminotransferase class-III
AL549_10845	PF04055	Radical SAM superfamily
AL549_10845	PF06968	Biotin and Thiamin Synthesis associated domain
AL549_10850	PF00155	Aminotransferase class I and II
AL549_10855	PF08241	Methyltransferase domain
AL549_10860	PF13500	AAA domain
AL549_10865	PF01435	Peptidase family M48
AL549_10870	PF12680	SnoaL-like domain
AL549_10875	PF00106	short chain dehydrogenase
AL549_10880	PF01593	Flavin containing amine oxidoreductase
AL549_10885	PF07103	AL549_10885
AL549_10890	PF02353	Mycolic acid cyclopropane synthetase
AL549_10895	PF11086	AL549_10895
AL549_10900	PF16036	AL549_10900
AL549_10905	PF12915	AL549_10905
AL549_10910	PF00206	Lyase
AL549_10910	PF08328	Adenylosuccinate lyase C-terminal
AL549_10915	PF04356	Protein of unknown function (DUF489)
AL549_10920	PF03054	tRNA methyl transferase
AL549_10930	PF00294	pfkB family carbohydrate kinase
AL549_10935	PF00816	H-NS histone family
AL549_10940	PF03553	AL549_10940
AL549_10945	PF01634	ATP phosphoribosyltransferase
AL549_10945	PF08029	HisG, C-terminal domain
AL549_10950	PF00815	Histidinol dehydrogenase
AL549_10955	PF00155	Aminotransferase class I and II
AL549_10960	PF00475	Imidazoleglycerol-phosphate dehydratase
AL549_10960	PF08645	Polynucleotide kinase 3 phosphatase
AL549_10965	PF00117	Glutamine amidotransferase class-I
AL549_10970	PF00977	Histidine biosynthesis protein
AL549_10975	PF00977	Histidine biosynthesis protein
AL549_10980	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL549_10980	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL549_10985	PF02810	SEC-C motif
AL549_10990	PF00563	EAL domain
AL549_10990	PF08668	HDOD domain
AL549_10995	PF00149	Calcineurin-like phosphoesterase
AL549_11000	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL549_11005	PF01406	tRNA synthetases class I (C) catalytic domain
AL549_11005	PF09190	DALR domain
AL549_11010	PF00265	Thymidine kinase
AL549_11015	PF02698	DUF218 domain
AL549_11020	PF13460	NADH(P)-binding
AL549_11025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_11025	PF03466	LysR substrate binding domain
AL549_11030	PF05232	AL549_11030
AL549_11035	PF06146	AL549_11035
AL549_11045	PF01226	Formate/nitrite transporter
AL549_11050	PF03649	AL549_11050
AL549_11055	PF06796	AL549_11055
AL549_11060	PF03264	NapC/NirT cytochrome c family, N-terminal region
AL549_11065	PF00384	Molybdopterin oxidoreductase
AL549_11065	PF01568	Molydopterin dinucleotide binding domain
AL549_11075	PF13609	Gram-negative porin
AL549_11080	PF13469	Sulfotransferase family
AL549_11085	PF02065	Melibiase
AL549_11090	PF11449	AL549_11090
AL549_11095	PF01368	DHH family
AL549_11095	PF02833	DHHA2 domain
AL549_11100	PF11042	AL549_11100
AL549_11105	PF11150	AL549_11105
AL549_11110	PF00005	ABC transporter
AL549_11115	PF00005	ABC transporter
AL549_11115	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_11120	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_11120	PF12911	AL549_11120
AL549_11125	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_11130	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_11135	PF00158	Sigma-54 interaction domain
AL549_11135	PF02954	Bacterial regulatory protein, Fis family
AL549_11140	PF04012	AL549_11140
AL549_11145	PF06667	AL549_11145
AL549_11150	PF04024	AL549_11150
AL549_11155	PF16576	AL549_11155
AL549_11160	PF13437	HlyD family secretion protein
AL549_11160	PF13533	Biotin-lipoyl like
AL549_11165	PF00873	AcrB/AcrD/AcrF family
AL549_11170	PF03352	Methyladenine glycosylase
AL549_11175	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL549_11180	PF13091	PLD-like domain
AL549_11180	PF13396	AL549_11180
AL549_11185	PF00209	Sodium:neurotransmitter symporter family
AL549_11190	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_11190	PF00672	HAMP domain
AL549_11195	PF00849	RNA pseudouridylate synthase
AL549_11200	PF10672	S-adenosylmethionine-dependent methyltransferase
AL549_11205	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_11205	PF00175	Oxidoreductase NAD-binding domain
AL549_11205	PF00970	Oxidoreductase FAD-binding domain
AL549_11210	PF03063	Prismane/CO dehydrogenase family
AL549_11215	PF00158	Sigma-54 interaction domain
AL549_11215	PF02954	Bacterial regulatory protein, Fis family
AL549_11220	PF01066	CDP-alcohol phosphatidyltransferase
AL549_11225	PF00005	ABC transporter
AL549_11235	PF13416	Bacterial extracellular solute-binding protein
AL549_11240	PF03724	META domain
AL549_11245	PF06945	AL549_11245
AL549_11255	PF00990	GGDEF domain
AL549_11260	PF07394	AL549_11260
AL549_11265	PF08811	AL549_11265
AL549_11270	PF01386	Ribosomal L25p family
AL549_11275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_11280	PF00072	Response regulator receiver domain
AL549_11280	PF00486	Transcriptional regulatory protein, C terminal
AL549_11290	PF00271	Helicase conserved C-terminal domain
AL549_11290	PF04851	Type III restriction enzyme, res subunit
AL549_11295	PF00849	RNA pseudouridylate synthase
AL549_11295	PF01479	S4 domain
AL549_11300	PF07690	Major Facilitator Superfamily
AL549_11305	PF11140	AL549_11305
AL549_11310	PF00027	Cyclic nucleotide-binding domain
AL549_11310	PF00999	Sodium/hydrogen exchanger family
AL549_11315	PF11066	AL549_11315
AL549_11315	PF13460	NADH(P)-binding
AL549_11320	PF00005	ABC transporter
AL549_11325	PF02687	AL549_11325
AL549_11330	PF07143	Hydroxyneurosporene synthase (CrtC)
AL549_11330	PF17186	AL549_11330
AL549_11335	PF06965	Na+/H+ antiporter 1
AL549_11340	PF00440	Bacterial regulatory proteins, tetR family
AL549_11345	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_11345	PF02770	Acyl-CoA dehydrogenase, middle domain
AL549_11345	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_11345	PF09317	AL549_11345
AL549_11350	PF07055	Enoyl reductase FAD binding domain
AL549_11350	PF12241	Trans-2-enoyl-CoA reductase catalytic region
AL549_11350	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
AL549_11355	PF02080	TrkA-C domain
AL549_11355	PF06826	AL549_11355
AL549_11360	PF00462	Glutaredoxin
AL549_11365	PF00465	Iron-containing alcohol dehydrogenase
AL549_11370	PF01380	SIS domain
AL549_11370	PF01418	Helix-turn-helix domain, rpiR family
AL549_11375	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AL549_11385	PF03956	AL549_11385
AL549_11390	PF08668	HDOD domain
AL549_11395	PF04993	TfoX N-terminal domain
AL549_11395	PF04994	TfoX C-terminal domain
AL549_11405	PF00072	Response regulator receiver domain
AL549_11410	PF00027	Cyclic nucleotide-binding domain
AL549_11410	PF00512	His Kinase A (phospho-acceptor) domain
AL549_11410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_11415	PF06097	AL549_11415
AL549_11420	PF00266	Aminotransferase class-V
AL549_11425	PF00005	ABC transporter
AL549_11425	PF00664	ABC transporter transmembrane region
AL549_11430	PF00005	ABC transporter
AL549_11430	PF00664	ABC transporter transmembrane region
AL549_11435	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_11440	PF10014	2OG-Fe dioxygenase
AL549_11445	PF00266	Aminotransferase class-V
AL549_11450	PF10977	AL549_11450
AL549_11455	PF00990	GGDEF domain
AL549_11460	PF00939	Sodium:sulfate symporter transmembrane region
AL549_11465	PF02698	DUF218 domain
AL549_11470	PF00390	Malic enzyme, N-terminal domain
AL549_11470	PF03949	Malic enzyme, NAD binding domain
AL549_11475	PF00270	DEAD/DEAH box helicase
AL549_11475	PF00271	Helicase conserved C-terminal domain
AL549_11475	PF04408	Helicase associated domain (HA2)
AL549_11480	PF02253	Phospholipase A1
AL549_11490	PF01259	SAICAR synthetase
AL549_11495	PF03846	Cell division inhibitor SulA
AL549_11500	PF04172	AL549_11500
AL549_11505	PF03788	AL549_11505
AL549_11510	PF00929	Exonuclease
AL549_11510	PF08411	Exonuclease C-terminal
AL549_11515	PF08732	AL549_11515
AL549_11520	PF13688	Metallo-peptidase family M12
AL549_11525	PF02277	Phosphoribosyltransferase
AL549_11530	PF02654	AL549_11530
AL549_11535	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AL549_11540	PF00300	Histidine phosphatase superfamily (branch 1)
AL549_11545	PF01432	Peptidase family M3
AL549_11545	PF08439	Oligopeptidase F
AL549_11550	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL549_11555	PF01032	FecCD transport family
AL549_11560	PF00005	ABC transporter
AL549_11565	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL549_11570	PF07209	AL549_11570
AL549_11575	PF07690	Major Facilitator Superfamily
AL549_11580	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_11580	PF03466	LysR substrate binding domain
AL549_11585	PF00462	Glutaredoxin
AL549_11590	PF01863	Protein of unknown function DUF45
AL549_11595	PF05971	Protein of unknown function (DUF890)
AL549_11605	PF13431	Tetratricopeptide repeat
AL549_11605	PF14559	Tetratricopeptide repeat
AL549_11610	PF04204	Homoserine O-succinyltransferase
AL549_11615	PF00149	Calcineurin-like phosphoesterase
AL549_11615	PF02872	5'-nucleotidase, C-terminal domain
AL549_11620	PF01546	Peptidase family M20/M25/M40
AL549_11620	PF07687	Peptidase dimerisation domain
AL549_11625	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_11625	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
AL549_11630	PF04209	homogentisate 1,2-dioxygenase
AL549_11635	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL549_11640	PF13417	Glutathione S-transferase, N-terminal domain
AL549_11645	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_11655	PF10881	AL549_11655
AL549_11675	PF00990	GGDEF domain
AL549_11680	PF00313	'Cold-shock' DNA-binding domain
AL549_11685	PF04342	AL549_11685
AL549_11690	PF00141	Peroxidase
AL549_11695	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL549_11700	PF00455	AL549_11700
AL549_11700	PF08220	DeoR-like helix-turn-helix domain
AL549_11705	PF00005	ABC transporter
AL549_11710	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_11715	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_11720	PF13416	Bacterial extracellular solute-binding protein
AL549_11725	PF01966	HD domain
AL549_11730	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_11730	PF00672	HAMP domain
AL549_11735	PF01925	AL549_11735
AL549_11740	PF00196	Bacterial regulatory proteins, luxR family
AL549_11750	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AL549_11755	PF00577	Outer membrane usher protein
AL549_11765	PF01970	AL549_11765
AL549_11770	PF07331	AL549_11770
AL549_11775	PF03401	Tripartite tricarboxylate transporter family receptor
AL549_11780	PF00271	Helicase conserved C-terminal domain
AL549_11780	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AL549_11780	PF04851	Type III restriction enzyme, res subunit
AL549_11780	PF08463	AL549_11780
AL549_11780	PF13643	AL549_11780
AL549_11785	PF02384	N-6 DNA Methylase
AL549_11785	PF12161	HsdM N-terminal domain
AL549_11790	PF01420	Type I restriction modification DNA specificity domain
AL549_11795	PF00392	Bacterial regulatory proteins, gntR family
AL549_11795	PF07729	FCD domain
AL549_11800	PF13714	Phosphoenolpyruvate phosphomutase
AL549_11805	PF00285	Citrate synthase
AL549_11810	PF00330	Aconitase family (aconitate hydratase)
AL549_11810	PF00694	Aconitase C-terminal domain
AL549_11815	PF04303	PrpF protein
AL549_11820	PF00501	AMP-binding enzyme
AL549_11820	PF13193	AMP-binding enzyme C-terminal domain
AL549_11820	PF16177	AL549_11820
AL549_11825	PF00583	Acetyltransferase (GNAT) family
AL549_11830	PF00089	Trypsin
AL549_11835	PF00293	NUDIX domain
AL549_11835	PF01569	PAP2 superfamily
AL549_11840	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_11840	PF00672	HAMP domain
AL549_11845	PF08282	haloacid dehalogenase-like hydrolase
AL549_11850	PF04055	Radical SAM superfamily
AL549_11850	PF13394	4Fe-4S single cluster domain
AL549_11855	PF06508	Queuosine biosynthesis protein QueC
AL549_11860	PF00990	GGDEF domain
AL549_11860	PF13424	Tetratricopeptide repeat
AL549_11865	PF11042	AL549_11865
AL549_11870	PF00691	OmpA family
AL549_11875	PF02321	Outer membrane efflux protein
AL549_11880	PF07691	PA14 domain
AL549_11880	PF13519	von Willebrand factor type A domain
AL549_11885	PF10672	S-adenosylmethionine-dependent methyltransferase
AL549_11890	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_11895	PF00708	Acylphosphatase
AL549_11900	PF04358	DsrC like protein
AL549_11910	PF01027	Inhibitor of apoptosis-promoting Bax1
AL549_11915	PF00005	ABC transporter
AL549_11920	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_11925	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_11930	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_11935	PF10414	Sirohaem synthase dimerisation region
AL549_11935	PF13241	Putative NAD(P)-binding
AL549_11935	PF14824	Sirohaem biosynthesis protein central
AL549_11940	PF12838	4Fe-4S dicluster domain
AL549_11945	PF12801	AL549_11945
AL549_11945	PF13187	4Fe-4S dicluster domain
AL549_11950	PF01553	Acyltransferase
AL549_11955	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AL549_11960	PF01810	AL549_11960
AL549_11970	PF01235	AL549_11970
AL549_11980	PF00196	Bacterial regulatory proteins, luxR family
AL549_11985	PF12698	ABC-2 family transporter protein
AL549_11990	PF12698	ABC-2 family transporter protein
AL549_11995	PF13437	HlyD family secretion protein
AL549_11995	PF13533	Biotin-lipoyl like
AL549_12000	PF02321	Outer membrane efflux protein
AL549_12010	PF00989	PAS fold
AL549_12010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_12010	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AL549_12010	PF17203	AL549_12010
AL549_12015	PF00072	Response regulator receiver domain
AL549_12015	PF12431	AL549_12015
AL549_12020	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AL549_12020	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AL549_12025	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL549_12030	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AL549_12030	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL549_12040	PF13505	Outer membrane protein beta-barrel domain
AL549_12055	PF13671	AAA domain
AL549_12060	PF02397	AL549_12060
AL549_12065	PF13641	Glycosyltransferase like family 2
AL549_12070	PF00534	Glycosyl transferases group 1
AL549_12070	PF13439	Glycosyltransferase Family 4
AL549_12075	PF13807	AL549_12075
AL549_12085	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_12090	PF04932	AL549_12090
AL549_12095	PF01943	AL549_12095
AL549_12100	PF00534	Glycosyl transferases group 1
AL549_12105	PF00534	Glycosyl transferases group 1
AL549_12105	PF13439	Glycosyltransferase Family 4
AL549_12110	PF13579	Glycosyl transferase 4-like domain
AL549_12110	PF13692	Glycosyl transferases group 1
AL549_12115	PF00072	Response regulator receiver domain
AL549_12115	PF00158	Sigma-54 interaction domain
AL549_12115	PF02954	Bacterial regulatory protein, Fis family
AL549_12120	PF00072	Response regulator receiver domain
AL549_12120	PF00512	His Kinase A (phospho-acceptor) domain
AL549_12120	PF01627	Hpt domain
AL549_12120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_12125	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AL549_12135	PF02563	Polysaccharide biosynthesis/export protein
AL549_12135	PF10531	SLBB domain
AL549_12140	PF00691	OmpA family
AL549_12145	PF01740	STAS domain
AL549_12150	PF01068	ATP dependent DNA ligase domain
AL549_12150	PF14743	DNA ligase OB-like domain
AL549_12155	PF00990	GGDEF domain
AL549_12160	PF04461	Protein of unknown function (DUF520)
AL549_12165	PF00793	DAHP synthetase I family
AL549_12170	PF14539	Domain of unknown function (DUF4442)
AL549_12180	PF13509	S1 domain
AL549_12185	PF01189	NOL1/NOP2/sun family
AL549_12185	PF13636	pre-rRNA processing and ribosome biogenesis
AL549_12185	PF17125	AL549_12185
AL549_12190	PF02470	AL549_12190
AL549_12195	PF04403	AL549_12195
AL549_12200	PF00005	ABC transporter
AL549_12200	PF00664	ABC transporter transmembrane region
AL549_12205	PF13185	GAF domain
AL549_12210	PF04352	ProQ/FINO family
AL549_12210	PF17516	AL549_12210
AL549_12215	PF00595	PDZ domain (Also known as DHR or GLGF)
AL549_12215	PF03572	Peptidase family S41
AL549_12215	PF08180	AL549_12215
AL549_12215	PF11818	AL549_12215
AL549_12225	PF01433	Peptidase family M1
AL549_12225	PF11940	Domain of unknown function (DUF3458)
AL549_12225	PF17432	AL549_12225
AL549_12230	PF05088	AL549_12230
AL549_12235	PF01180	Dihydroorotate dehydrogenase
AL549_12240	PF07126	AL549_12240
AL549_12245	PF01170	Putative RNA methylase family UPF0020
AL549_12245	PF02926	THUMP domain
AL549_12245	PF10672	S-adenosylmethionine-dependent methyltransferase
AL549_12250	PF05768	Glutaredoxin-like domain (DUF836)
AL549_12255	PF00005	ABC transporter
AL549_12255	PF12848	ABC transporter
AL549_12255	PF16326	AL549_12255
AL549_12260	PF11949	AL549_12260
AL549_12265	PF04957	Ribosome modulation factor
AL549_12270	PF07977	FabA-like domain
AL549_12275	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL549_12275	PF13654	AAA domain
AL549_12280	PF06303	Organiser of macrodomain of Terminus of chromosome
AL549_12280	PF17414	AL549_12280
AL549_12285	PF12321	AL549_12285
AL549_12295	PF08668	HDOD domain
AL549_12300	PF00072	Response regulator receiver domain
AL549_12300	PF00512	His Kinase A (phospho-acceptor) domain
AL549_12300	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_12305	PF08495	AL549_12305
AL549_12305	PF10442	AL549_12305
AL549_12315	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL549_12320	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
AL549_12325	PF05545	AL549_12325
AL549_12330	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_12330	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
AL549_12335	PF05751	AL549_12335
AL549_12340	PF00122	E1-E2 ATPase
AL549_12340	PF00403	Heavy-metal-associated domain
AL549_12340	PF00702	haloacid dehalogenase-like hydrolase
AL549_12340	PF12156	AL549_12340
AL549_12345	PF03597	AL549_12345
AL549_12350	PF13386	AL549_12350
AL549_12355	PF00027	Cyclic nucleotide-binding domain
AL549_12355	PF13545	Crp-like helix-turn-helix domain
AL549_12360	PF00582	Universal stress protein family
AL549_12365	PF01171	PP-loop family
AL549_12370	PF01609	Transposase DDE domain
AL549_12370	PF13006	AL549_12370
AL549_12375	PF11205	AL549_12375
AL549_12380	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL549_12390	PF00005	ABC transporter
AL549_12390	PF08402	TOBE domain
AL549_12395	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_12400	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_12405	PF13416	Bacterial extracellular solute-binding protein
AL549_12410	PF13416	Bacterial extracellular solute-binding protein
AL549_12415	PF02146	Sir2 family
AL549_12420	PF00909	Ammonium Transporter Family
AL549_12450	PF01292	Prokaryotic cytochrome b561
AL549_12455	PF13247	4Fe-4S dicluster domain
AL549_12460	PF00384	Molybdopterin oxidoreductase
AL549_12460	PF01568	Molydopterin dinucleotide binding domain
AL549_12460	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL549_12470	PF02613	Nitrate reductase delta subunit
AL549_12475	PF00037	4Fe-4S binding domain
AL549_12475	PF12838	4Fe-4S dicluster domain
AL549_12480	PF11748	AL549_12480
AL549_12485	PF11749	AL549_12485
AL549_12490	PF02634	FdhD/NarQ family
AL549_12495	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_12495	PF00672	HAMP domain
AL549_12500	PF00005	ABC transporter
AL549_12500	PF12848	ABC transporter
AL549_12510	PF00924	Mechanosensitive ion channel
AL549_12515	PF00512	His Kinase A (phospho-acceptor) domain
AL549_12515	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_12515	PF17202	AL549_12515
AL549_12520	PF00072	Response regulator receiver domain
AL549_12520	PF00158	Sigma-54 interaction domain
AL549_12520	PF02954	Bacterial regulatory protein, Fis family
AL549_12525	PF12849	PBP superfamily domain
AL549_12530	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_12535	PF00005	ABC transporter
AL549_12540	PF12804	MobA-like NTP transferase domain
AL549_12545	PF00994	Probable molybdopterin binding domain
AL549_12545	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AL549_12545	PF03453	MoeA N-terminal region (domain I and II)
AL549_12545	PF03454	MoeA C-terminal region (domain IV)
AL549_12550	PF11173	AL549_12550
AL549_12555	PF00480	ROK family
AL549_12560	PF03942	AL549_12560
AL549_12565	PF04116	AL549_12565
AL549_12570	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_12575	PF00877	NlpC/P60 family
AL549_12580	PF12290	AL549_12580
AL549_12585	PF00990	GGDEF domain
AL549_12590	PF00072	Response regulator receiver domain
AL549_12595	PF03881	Fructosamine kinase
AL549_12600	PF14255	AL549_12600
AL549_12605	PF00677	Lumazine binding domain
AL549_12610	PF01554	MatE
AL549_12640	PF00665	Integrase core domain
AL549_12640	PF13276	AL549_12640
AL549_12650	PF13091	PLD-like domain
AL549_12650	PF14280	AL549_12650
AL549_12660	PF13673	Acetyltransferase (GNAT) domain
AL549_12685	PF00665	Integrase core domain
AL549_12685	PF13276	AL549_12685
AL549_12700	PF10077	AL549_12700
AL549_12715	PF09016	Pas factor saposin fold
AL549_12720	PF00583	Acetyltransferase (GNAT) family
AL549_12730	PF13527	Acetyltransferase (GNAT) domain
AL549_12740	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL549_12745	PF03703	AL549_12745
AL549_12755	PF07799	AL549_12755
AL549_12765	PF14552	Tautomerase enzyme
AL549_12770	PF13420	Acetyltransferase (GNAT) domain
AL549_12775	PF12680	SnoaL-like domain
AL549_12795	PF13673	Acetyltransferase (GNAT) domain
AL549_12805	PF00043	Glutathione S-transferase, C-terminal domain
AL549_12805	PF02798	Glutathione S-transferase, N-terminal domain
AL549_12820	PF02498	AL549_12820
AL549_12845	PF10988	Protein of unknown function (DUF2807)
AL549_12855	PF07653	Variant SH3 domain
AL549_12860	PF13302	Acetyltransferase (GNAT) domain
AL549_12865	PF14552	Tautomerase enzyme
AL549_12870	PF14022	AL549_12870
AL549_12900	PF00043	Glutathione S-transferase, C-terminal domain
AL549_12900	PF02798	Glutathione S-transferase, N-terminal domain
AL549_12935	PF11185	AL549_12935
AL549_12935	PF11665	AL549_12935
AL549_12940	PF13671	AAA domain
AL549_12945	PF12680	SnoaL-like domain
AL549_12980	PF00583	Acetyltransferase (GNAT) family
AL549_12995	PF04471	Restriction endonuclease
AL549_13020	PF12158	AL549_13020
AL549_13040	PF13302	Acetyltransferase (GNAT) domain
AL549_13050	PF09905	Uncharacterized conserved protein (DUF2132)
AL549_13065	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_13070	PF01844	HNH endonuclease
AL549_13075	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_13095	PF13302	Acetyltransferase (GNAT) domain
AL549_13100	PF00583	Acetyltransferase (GNAT) family
AL549_13105	PF07978	NIPSNAP
AL549_13110	PF13671	AAA domain
AL549_13130	PF13676	TIR domain
AL549_13135	PF04266	ASCH domain
AL549_13150	PF08241	Methyltransferase domain
AL549_13160	PF13302	Acetyltransferase (GNAT) domain
AL549_13175	PF00293	NUDIX domain
AL549_13190	PF13673	Acetyltransferase (GNAT) domain
AL549_13210	PF13302	Acetyltransferase (GNAT) domain
AL549_13240	PF03693	Uncharacterised protein family (UPF0156)
AL549_13245	PF05016	Plasmid stabilisation system protein
AL549_13255	PF12746	GNAT acetyltransferase
AL549_13265	PF10988	Protein of unknown function (DUF2807)
AL549_13275	PF13302	Acetyltransferase (GNAT) domain
AL549_13295	PF07978	NIPSNAP
AL549_13310	PF11665	AL549_13310
AL549_13320	PF00665	Integrase core domain
AL549_13320	PF13276	AL549_13320
AL549_13340	PF00293	NUDIX domain
AL549_13365	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_13370	PF07978	NIPSNAP
AL549_13380	PF04664	AL549_13380
AL549_13385	PF01396	AL549_13385
AL549_13385	PF08378	AL549_13385
AL549_13410	PF01844	HNH endonuclease
AL549_13430	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_13430	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_13435	PF04970	Lecithin retinol acyltransferase
AL549_13440	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_13445	PF15655	AL549_13445
AL549_13450	PF12681	Glyoxalase-like domain
AL549_13465	PF04266	ASCH domain
AL549_13480	PF11665	AL549_13480
AL549_13485	PF06940	AL549_13485
AL549_13500	PF13419	Haloacid dehalogenase-like hydrolase
AL549_13505	PF01965	DJ-1/PfpI family
AL549_13525	PF01202	Shikimate kinase
AL549_13530	PF10387	Protein of unknown function (DUF2442)
AL549_13535	PF13711	AL549_13535
AL549_13560	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_13565	PF01230	HIT domain
AL549_13590	PF13527	Acetyltransferase (GNAT) domain
AL549_13600	PF00293	NUDIX domain
AL549_13605	PF04266	ASCH domain
AL549_13615	PF00293	NUDIX domain
AL549_13645	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL549_13650	PF05016	Plasmid stabilisation system protein
AL549_13655	PF01797	Transposase IS200 like
AL549_13685	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_13695	PF00293	NUDIX domain
AL549_13705	PF14552	Tautomerase enzyme
AL549_13710	PF00583	Acetyltransferase (GNAT) family
AL549_13730	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL549_13735	PF07362	Post-segregation antitoxin CcdA
AL549_13740	PF01845	CcdB protein
AL549_13745	PF13302	Acetyltransferase (GNAT) domain
AL549_13755	PF04365	Protein of unknown function (DUF497)
AL549_13770	PF07362	Post-segregation antitoxin CcdA
AL549_13775	PF01845	CcdB protein
AL549_13780	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_13825	PF06769	Plasmid encoded toxin Txe
AL549_13830	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AL549_13840	PF01810	AL549_13840
AL549_13850	PF00583	Acetyltransferase (GNAT) family
AL549_13855	PF00589	Phage integrase family
AL549_13855	PF13495	Phage integrase, N-terminal SAM-like domain
AL549_13860	PF00453	Ribosomal protein L20
AL549_13865	PF01632	Ribosomal protein L35
AL549_13870	PF00707	Translation initiation factor IF-3, C-terminal domain
AL549_13870	PF05198	Translation initiation factor IF-3, N-terminal domain
AL549_13875	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL549_13875	PF02824	TGS domain
AL549_13875	PF03129	Anticodon binding domain
AL549_13875	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL549_13880	PF11383	AL549_13880
AL549_13885	PF07070	AL549_13885
AL549_13890	PF00392	Bacterial regulatory proteins, gntR family
AL549_13890	PF07702	UTRA domain
AL549_13895	PF01979	Amidohydrolase family
AL549_13900	PF00491	Arginase family
AL549_13905	PF01175	Urocanase
AL549_13905	PF17391	AL549_13905
AL549_13905	PF17392	AL549_13905
AL549_13910	PF00221	Aromatic amino acid lyase
AL549_13915	PF12119	AL549_13915
AL549_13920	PF00089	Trypsin
AL549_13925	PF04191	Phospholipid methyltransferase
AL549_13930	PF01565	FAD binding domain
AL549_13930	PF02913	FAD linked oxidases, C-terminal domain
AL549_13930	PF13183	4Fe-4S dicluster domain
AL549_13935	PF11813	AL549_13935
AL549_13940	PF10979	AL549_13940
AL549_13945	PF00691	OmpA family
AL549_13945	PF13488	AL549_13945
AL549_13950	PF08238	Sel1 repeat
AL549_13960	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_13960	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
AL549_13965	PF02222	ATP-grasp domain
AL549_13970	PF05724	Thiopurine S-methyltransferase (TPMT)
AL549_13980	PF00216	Bacterial DNA-binding protein
AL549_13985	PF00857	Isochorismatase family
AL549_13995	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL549_14000	PF01588	Putative tRNA binding domain
AL549_14000	PF03147	Ferredoxin-fold anticodon binding domain
AL549_14000	PF03483	B3/4 domain
AL549_14000	PF03484	tRNA synthetase B5 domain
AL549_14005	PF01409	tRNA synthetases class II core domain (F)
AL549_14005	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AL549_14010	PF00990	GGDEF domain
AL549_14010	PF01814	Hemerythrin HHE cation binding domain
AL549_14020	PF17131	AL549_14020
AL549_14025	PF03176	MMPL family
AL549_14030	PF00440	Bacterial regulatory proteins, tetR family
AL549_14040	PF16313	AL549_14040
AL549_14045	PF13443	Cro/C1-type HTH DNA-binding domain
AL549_14050	PF13302	Acetyltransferase (GNAT) domain
AL549_14055	PF01965	DJ-1/PfpI family
AL549_14060	PF08668	HDOD domain
AL549_14065	PF13419	Haloacid dehalogenase-like hydrolase
AL549_14070	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL549_14075	PF00491	Arginase family
AL549_14080	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_14095	PF07690	Major Facilitator Superfamily
AL549_14100	PF06580	AL549_14100
AL549_14105	PF00072	Response regulator receiver domain
AL549_14105	PF04397	LytTr DNA-binding domain
AL549_14110	PF03280	Proteobacterial lipase chaperone protein
AL549_14115	PF00561	alpha/beta hydrolase fold
AL549_14120	PF02566	OsmC-like protein
AL549_14135	PF13505	Outer membrane protein beta-barrel domain
AL549_14140	PF00270	DEAD/DEAH box helicase
AL549_14140	PF00271	Helicase conserved C-terminal domain
AL549_14140	PF04408	Helicase associated domain (HA2)
AL549_14140	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AL549_14140	PF11898	AL549_14140
AL549_14145	PF00704	Glycosyl hydrolases family 18
AL549_14150	PF02525	Flavodoxin-like fold
AL549_14155	PF00092	von Willebrand factor type A domain
AL549_14155	PF13400	AL549_14155
AL549_14165	PF07811	AL549_14165
AL549_14170	PF13181	Tetratricopeptide repeat
AL549_14170	PF13432	Tetratricopeptide repeat
AL549_14175	PF00482	Type II secretion system (T2SS), protein F
AL549_14180	PF00482	Type II secretion system (T2SS), protein F
AL549_14185	PF00437	Type II/IV secretion system protein
AL549_14190	PF10609	ParA/MinD ATPase like
AL549_14200	PF00263	AL549_14200
AL549_14200	PF13629	AL549_14200
AL549_14205	PF08666	SAF domain
AL549_14205	PF16976	AL549_14205
AL549_14210	PF01478	Type IV leader peptidase family
AL549_14215	PF04964	AL549_14215
AL549_14220	PF07603	AL549_14220
AL549_14230	PF06629	AL549_14230
AL549_14240	PF05099	Tellurite resistance protein TerB
AL549_14245	PF00929	Exonuclease
AL549_14250	PF00990	GGDEF domain
AL549_14250	PF03924	CHASE domain
AL549_14255	PF10816	AL549_14255
AL549_14260	PF00012	Hsp70 protein
AL549_14265	PF00012	Hsp70 protein
AL549_14265	PF12531	AL549_14265
AL549_14275	PF05656	AL549_14275
AL549_14280	PF12833	Helix-turn-helix domain
AL549_14285	PF03352	Methyladenine glycosylase
AL549_14290	PF13302	Acetyltransferase (GNAT) domain
AL549_14295	PF00990	GGDEF domain
AL549_14300	PF09084	NMT1/THI5 like
AL549_14305	PF07963	Prokaryotic N-terminal methylation motif
AL549_14310	PF02449	Beta-galactosidase
AL549_14310	PF16116	AL549_14310
AL549_14320	PF00534	Glycosyl transferases group 1
AL549_14320	PF13439	Glycosyltransferase Family 4
AL549_14325	PF00534	Glycosyl transferases group 1
AL549_14325	PF13439	Glycosyltransferase Family 4
AL549_14330	PF00535	Glycosyl transferase family 2
AL549_14345	PF13807	AL549_14345
AL549_14350	PF02563	Polysaccharide biosynthesis/export protein
AL549_14350	PF10531	SLBB domain
AL549_14360	PF02397	AL549_14360
AL549_14360	PF13727	CoA-binding domain
AL549_14365	PF01235	AL549_14365
AL549_14370	PF00005	ABC transporter
AL549_14370	PF00664	ABC transporter transmembrane region
AL549_14375	PF00005	ABC transporter
AL549_14375	PF00664	ABC transporter transmembrane region
AL549_14390	PF00210	Ferritin-like domain
AL549_14395	PF13487	HD domain
AL549_14400	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_14405	PF03222	Tryptophan/tyrosine permease family
AL549_14410	PF00781	Diacylglycerol kinase catalytic domain
AL549_14415	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_14420	PF01734	Patatin-like phospholipase
AL549_14425	PF01966	HD domain
AL549_14430	PF13640	2OG-Fe(II) oxygenase superfamily
AL549_14435	PF14321	AL549_14435
AL549_14440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_14440	PF03466	LysR substrate binding domain
AL549_14445	PF04055	Radical SAM superfamily
AL549_14445	PF13353	4Fe-4S single cluster domain
AL549_14450	PF11230	AL549_14450
AL549_14455	PF00563	EAL domain
AL549_14455	PF00990	GGDEF domain
AL549_14455	PF05228	AL549_14455
AL549_14455	PF13426	PAS domain
AL549_14460	PF01966	HD domain
AL549_14460	PF11871	AL549_14460
AL549_14465	PF03547	AL549_14465
AL549_14470	PF00563	EAL domain
AL549_14470	PF00990	GGDEF domain
AL549_14470	PF08447	PAS fold
AL549_14475	PF00990	GGDEF domain
AL549_14480	PF00072	Response regulator receiver domain
AL549_14485	PF00027	Cyclic nucleotide-binding domain
AL549_14485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_14490	PF00939	Sodium:sulfate symporter transmembrane region
AL549_14495	PF11163	AL549_14495
AL549_14500	PF13023	HD domain
AL549_14505	PF13302	Acetyltransferase (GNAT) domain
AL549_14510	PF00158	Sigma-54 interaction domain
AL549_14510	PF00989	PAS fold
AL549_14515	PF05128	AL549_14515
AL549_14520	PF04317	AL549_14520
AL549_14530	PF05681	AL549_14530
AL549_14530	PF05683	Fumarase C-terminus
AL549_14535	PF00425	chorismate binding enzyme
AL549_14535	PF04715	Anthranilate synthase component I, N terminal region
AL549_14545	PF00072	Response regulator receiver domain
AL549_14545	PF00512	His Kinase A (phospho-acceptor) domain
AL549_14545	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_14550	PF07700	Heme NO binding
AL549_14555	PF00293	NUDIX domain
AL549_14560	PF03222	Tryptophan/tyrosine permease family
AL549_14565	PF03313	AL549_14565
AL549_14565	PF03315	Serine dehydratase beta chain
AL549_14570	PF00563	EAL domain
AL549_14575	PF00583	Acetyltransferase (GNAT) family
AL549_14580	PF01242	6-pyruvoyl tetrahydropterin synthase
AL549_14585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_14590	PF00152	tRNA synthetases class II (D, K and N)
AL549_14590	PF01336	OB-fold nucleic acid binding domain
AL549_14600	PF00155	Aminotransferase class I and II
AL549_14600	PF00392	Bacterial regulatory proteins, gntR family
AL549_14615	PF01966	HD domain
AL549_14620	PF00155	Aminotransferase class I and II
AL549_14630	PF00027	Cyclic nucleotide-binding domain
AL549_14630	PF00571	CBS domain
AL549_14630	PF03445	AL549_14630
AL549_14630	PF10335	AL549_14630
AL549_14635	PF00929	Exonuclease
AL549_14640	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_14640	PF00672	HAMP domain
AL549_14640	PF02743	Cache domain
AL549_14645	PF02028	BCCT family transporter
AL549_14650	PF01047	MarR family
AL549_14655	PF00072	Response regulator receiver domain
AL549_14655	PF00196	Bacterial regulatory proteins, luxR family
AL549_14660	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_14660	PF07730	Histidine kinase
AL549_14660	PF17200	AL549_14660
AL549_14665	PF06808	AL549_14665
AL549_14670	PF04290	AL549_14670
AL549_14675	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_14680	PF01609	Transposase DDE domain
AL549_14680	PF13006	AL549_14680
AL549_14685	PF00925	GTP cyclohydrolase II
AL549_14690	PF01609	Transposase DDE domain
AL549_14690	PF13006	AL549_14690
AL549_14695	PF00392	Bacterial regulatory proteins, gntR family
AL549_14695	PF07840	FadR C-terminal domain
AL549_14700	PF06450	AL549_14700
AL549_14705	PF02600	Disulfide bond formation protein DsbB
AL549_14710	PF02810	SEC-C motif
AL549_14715	PF01207	Dihydrouridine synthase (Dus)
AL549_14720	PF00990	GGDEF domain
AL549_14725	PF00128	Alpha amylase, catalytic domain
AL549_14725	PF02903	Alpha amylase, N-terminal ig-like domain
AL549_14730	PF00005	ABC transporter
AL549_14735	PF02653	AL549_14735
AL549_14740	PF04392	ABC transporter substrate binding protein
AL549_14745	PF04217	AL549_14745
AL549_14750	PF00871	Acetokinase family
AL549_14755	PF01515	Phosphate acetyl/butaryl transferase
AL549_14755	PF07085	DRTGG domain
AL549_14755	PF13500	AAA domain
AL549_14760	PF01717	Cobalamin-independent synthase, Catalytic domain
AL549_14760	PF08267	Cobalamin-independent synthase, N-terminal domain
AL549_14765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_14765	PF03466	LysR substrate binding domain
AL549_14770	PF14056	AL549_14770
AL549_14780	PF00563	EAL domain
AL549_14780	PF00571	CBS domain
AL549_14780	PF00989	PAS fold
AL549_14785	PF00563	EAL domain
AL549_14785	PF13426	PAS domain
AL549_14790	PF04055	Radical SAM superfamily
AL549_14790	PF08497	AL549_14790
AL549_14790	PF11842	AL549_14790
AL549_14795	PF00563	EAL domain
AL549_14795	PF00990	GGDEF domain
AL549_14795	PF08269	Cache domain
AL549_14800	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_14805	PF00916	AL549_14805
AL549_14805	PF01740	STAS domain
AL549_14810	PF12833	Helix-turn-helix domain
AL549_14810	PF12852	Cupin
AL549_14815	PF02627	Carboxymuconolactone decarboxylase family
AL549_14820	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_14820	PF12793	AL549_14820
AL549_14825	PF03741	AL549_14825
AL549_14830	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_14830	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_14835	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_14835	PF12729	AL549_14835
AL549_14840	PF13419	Haloacid dehalogenase-like hydrolase
AL549_14845	PF12680	SnoaL-like domain
AL549_14850	PF06042	Bacterial protein of unknown function (DUF925)
AL549_14855	PF04229	GrpB protein
AL549_14860	PF13521	AAA domain
AL549_14865	PF13302	Acetyltransferase (GNAT) domain
AL549_14870	PF13453	AL549_14870
AL549_14875	PF01381	Helix-turn-helix
AL549_14880	PF07804	HipA-like C-terminal domain
AL549_14880	PF13657	HipA N-terminal domain
AL549_14885	PF13489	Methyltransferase domain
AL549_14890	PF00271	Helicase conserved C-terminal domain
AL549_14890	PF04851	Type III restriction enzyme, res subunit
AL549_14890	PF13091	PLD-like domain
AL549_14900	PF06610	AL549_14900
AL549_14905	PF00072	Response regulator receiver domain
AL549_14905	PF00512	His Kinase A (phospho-acceptor) domain
AL549_14905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_14905	PF02743	Cache domain
AL549_14910	PF03695	Uncharacterised protein family (UPF0149)
AL549_14915	PF03738	Glutathionylspermidine synthase preATP-grasp
AL549_14920	PF06693	AL549_14920
AL549_14925	PF03994	AL549_14925
AL549_14930	PF07885	Ion channel
AL549_14935	PF02445	Quinolinate synthetase A protein
AL549_14940	PF07719	Tetratricopeptide repeat
AL549_14940	PF13432	Tetratricopeptide repeat
AL549_14940	PF16331	AL549_14940
AL549_14945	PF00691	OmpA family
AL549_14950	PF04052	TolB amino-terminal domain
AL549_14950	PF07676	WD40-like Beta Propeller Repeat
AL549_14955	PF06519	TolA C-terminal
AL549_14960	PF02472	Biopolymer transport protein ExbD/TolR
AL549_14965	PF01618	AL549_14965
AL549_14970	PF03061	Thioesterase superfamily
AL549_14975	PF09600	AL549_14975
AL549_14980	PF08173	AL549_14980
AL549_14985	PF02322	AL549_14985
AL549_14990	PF01654	AL549_14990
AL549_14995	PF05491	Holliday junction DNA helicase ruvB C-terminus
AL549_14995	PF05496	Holliday junction DNA helicase ruvB N-terminus
AL549_15000	PF01330	RuvA N terminal domain
AL549_15000	PF07499	RuvA, C-terminal domain
AL549_15000	PF14520	Helix-hairpin-helix domain
AL549_15005	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_15010	PF02075	Crossover junction endodeoxyribonuclease RuvC
AL549_15015	PF00152	tRNA synthetases class II (D, K and N)
AL549_15015	PF01336	OB-fold nucleic acid binding domain
AL549_15015	PF02938	GAD domain
AL549_15020	PF01904	Protein of unknown function DUF72
AL549_15025	PF13649	Methyltransferase domain
AL549_15030	PF08003	Protein of unknown function (DUF1698)
AL549_15035	PF05618	Putative ATP-dependant zinc protease
AL549_15040	PF14400	AL549_15040
AL549_15040	PF14402	AL549_15040
AL549_15045	PF14397	AL549_15045
AL549_15050	PF00732	GMC oxidoreductase
AL549_15050	PF05199	GMC oxidoreductase
AL549_15055	PF00171	Aldehyde dehydrogenase family
AL549_15060	PF12625	AL549_15060
AL549_15060	PF12833	Helix-turn-helix domain
AL549_15065	PF04310	MukB N-terminal
AL549_15065	PF13558	Putative exonuclease SbcCD, C subunit
AL549_15065	PF16330	AL549_15065
AL549_15070	PF04288	MukE-like family
AL549_15075	PF03882	KicB killing factor
AL549_15075	PF17192	AL549_15075
AL549_15075	PF17193	AL549_15075
AL549_15080	PF13847	Methyltransferase domain
AL549_15085	PF02698	DUF218 domain
AL549_15090	PF00072	Response regulator receiver domain
AL549_15090	PF00486	Transcriptional regulatory protein, C terminal
AL549_15095	PF02613	Nitrate reductase delta subunit
AL549_15100	PF00356	Bacterial regulatory proteins, lacI family
AL549_15100	PF13377	Periplasmic binding protein-like domain
AL549_15105	PF04993	TfoX N-terminal domain
AL549_15105	PF04994	TfoX C-terminal domain
AL549_15110	PF09335	AL549_15110
AL549_15115	PF09413	Domain of unknown function (DUF2007)
AL549_15120	PF00561	alpha/beta hydrolase fold
AL549_15125	PF00534	Glycosyl transferases group 1
AL549_15125	PF08323	Starch synthase catalytic domain
AL549_15130	PF00483	Nucleotidyl transferase
AL549_15135	PF01131	DNA topoisomerase
AL549_15135	PF01396	AL549_15135
AL549_15135	PF01751	Toprim domain
AL549_15135	PF08272	Topoisomerase I zinc-ribbon-like
AL549_15140	PF10692	Protein of unknown function (DUF2498)
AL549_15145	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL549_15150	PF05433	AL549_15150
AL549_15155	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AL549_15160	PF04376	AL549_15160
AL549_15160	PF04377	AL549_15160
AL549_15165	PF01176	Translation initiation factor 1A / IF-1
AL549_15170	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_15170	PF02861	Clp amino terminal domain
AL549_15170	PF07724	AAA domain (Cdc48 subfamily)
AL549_15170	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_15175	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AL549_15180	PF00313	'Cold-shock' DNA-binding domain
AL549_15185	PF03971	Monomeric isocitrate dehydrogenase
AL549_15190	PF00849	RNA pseudouridylate synthase
AL549_15195	PF09829	AL549_15195
AL549_15200	PF13609	Gram-negative porin
AL549_15205	PF06733	DEAD_2
AL549_15205	PF13307	Helicase C-terminal domain
AL549_15210	PF01925	AL549_15210
AL549_15215	PF07445	Primosomal replication protein priB and priC
AL549_15220	PF10689	AL549_15220
AL549_15225	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_15225	PF00672	HAMP domain
AL549_15225	PF02743	Cache domain
AL549_15230	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_15235	PF17291	AL549_15235
AL549_15240	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_15245	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_15250	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_15255	PF00005	ABC transporter
AL549_15265	PF11840	AL549_15265
AL549_15270	PF01228	Glycine radical
AL549_15270	PF02901	Pyruvate formate lyase
AL549_15275	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
AL549_15280	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_15285	PF04055	Radical SAM superfamily
AL549_15285	PF13353	4Fe-4S single cluster domain
AL549_15290	PF01891	Cobalt uptake substrate-specific transmembrane region
AL549_15295	PF03887	YfbU domain
AL549_15300	PF06798	AL549_15300
AL549_15300	PF08298	PrkA AAA domain
AL549_15305	PF04285	AL549_15305
AL549_15310	PF04293	AL549_15310
AL549_15315	PF00990	GGDEF domain
AL549_15320	PF02348	Cytidylyltransferase
AL549_15325	PF03966	Trm112p-like protein
AL549_15330	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AL549_15335	PF00005	ABC transporter
AL549_15335	PF00664	ABC transporter transmembrane region
AL549_15340	PF00753	Metallo-beta-lactamase superfamily
AL549_15340	PF03772	AL549_15340
AL549_15340	PF13567	AL549_15340
AL549_15345	PF09835	AL549_15345
AL549_15350	PF02687	AL549_15350
AL549_15350	PF12704	MacB-like periplasmic core domain
AL549_15355	PF00005	ABC transporter
AL549_15360	PF02687	AL549_15360
AL549_15360	PF12704	MacB-like periplasmic core domain
AL549_15370	PF00270	DEAD/DEAH box helicase
AL549_15370	PF00271	Helicase conserved C-terminal domain
AL549_15370	PF02559	CarD-like/TRCF domain
AL549_15370	PF03461	TRCF domain
AL549_15375	PF10972	AL549_15375
AL549_15380	PF13302	Acetyltransferase (GNAT) domain
AL549_15385	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_15390	PF05728	Uncharacterised protein family (UPF0227)
AL549_15395	PF01636	Phosphotransferase enzyme family
AL549_15400	PF13036	Protein of unknown function (DUF3897)
AL549_15405	PF07233	Protein of unknown function (DUF1425)
AL549_15415	PF01230	HIT domain
AL549_15420	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_15420	PF12729	AL549_15420
AL549_15425	PF09002	Domain of unknown function (DUF1887)
AL549_15430	PF01048	Phosphorylase superfamily
AL549_15435	PF00122	E1-E2 ATPase
AL549_15435	PF00403	Heavy-metal-associated domain
AL549_15435	PF00702	haloacid dehalogenase-like hydrolase
AL549_15440	PF00571	CBS domain
AL549_15445	PF00990	GGDEF domain
AL549_15445	PF08448	PAS fold
AL549_15450	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL549_15450	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL549_15450	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL549_15455	PF13520	Amino acid permease
AL549_15460	PF00486	Transcriptional regulatory protein, C terminal
AL549_15465	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
AL549_15470	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_15470	PF00672	HAMP domain
AL549_15470	PF02743	Cache domain
AL549_15475	PF11008	AL549_15475
AL549_15480	PF00990	GGDEF domain
AL549_15485	PF01769	Divalent cation transporter
AL549_15515	PF13676	TIR domain
AL549_15520	PF00589	Phage integrase family
AL549_15525	PF07693	AL549_15525
AL549_15540	PF13476	AAA domain
AL549_15555	PF00589	Phage integrase family
AL549_15565	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AL549_15565	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AL549_15570	PF13847	Methyltransferase domain
AL549_15575	PF04187	Protein of unknown function, DUF399
AL549_15585	PF00245	Alkaline phosphatase
AL549_15590	PF13467	Ribbon-helix-helix domain
AL549_15595	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL549_15600	PF03992	Antibiotic biosynthesis monooxygenase
AL549_15605	PF03692	AL549_15605
AL549_15610	PF03692	AL549_15610
AL549_15615	PF00230	Major intrinsic protein
AL549_15620	PF00072	Response regulator receiver domain
AL549_15620	PF00486	Transcriptional regulatory protein, C terminal
AL549_15625	PF00512	His Kinase A (phospho-acceptor) domain
AL549_15625	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_15630	PF11059	AL549_15630
AL549_15640	PF02132	RecR protein
AL549_15640	PF13662	Toprim domain
AL549_15645	PF02575	YbaB/EbfC DNA-binding family
AL549_15650	PF12168	AL549_15650
AL549_15650	PF12169	DNA polymerase III subunits gamma and tau domain III
AL549_15650	PF12170	DNA polymerase III tau subunit V interacting with alpha
AL549_15650	PF13177	DNA polymerase III, delta subunit
AL549_15655	PF00156	Phosphoribosyl transferase domain
AL549_15660	PF00072	Response regulator receiver domain
AL549_15665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_15665	PF03466	LysR substrate binding domain
AL549_15670	PF00156	Phosphoribosyl transferase domain
AL549_15670	PF13522	Glutamine amidotransferase domain
AL549_15675	PF02674	AL549_15675
AL549_15680	PF05036	Sporulation related domain
AL549_15685	PF02875	Mur ligase family, glutamate ligase domain
AL549_15685	PF08245	Mur ligase middle domain
AL549_15690	PF01039	Carboxyl transferase domain
AL549_15695	PF01416	tRNA pseudouridine synthase
AL549_15705	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL549_15705	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL549_15710	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_15710	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_15710	PF11890	Domain of unknown function (DUF3410)
AL549_15715	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL549_15715	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL549_15720	PF01266	FAD dependent oxidoreductase
AL549_15720	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AL549_15725	PF08891	AL549_15725
AL549_15730	PF04315	AL549_15730
AL549_15735	PF03458	AL549_15735
AL549_15740	PF01264	Chorismate synthase
AL549_15745	PF05175	Methyltransferase small domain
AL549_15750	PF01713	Smr domain
AL549_15755	PF00300	Histidine phosphatase superfamily (branch 1)
AL549_15760	PF00675	Insulinase (Peptidase family M16)
AL549_15760	PF05193	Peptidase M16 inactive domain
AL549_15760	PF16187	AL549_15760
AL549_15765	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_15765	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL549_15765	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL549_15770	PF00108	Thiolase, N-terminal domain
AL549_15770	PF02803	Thiolase, C-terminal domain
AL549_15775	PF04542	Sigma-70 region 2
AL549_15775	PF08281	Sigma-70, region 4
AL549_15780	PF11859	AL549_15780
AL549_15785	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_15790	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL549_15795	PF04333	AL549_15795
AL549_15800	PF14559	Tetratricopeptide repeat
AL549_15805	PF03918	Cytochrome C biogenesis protein
AL549_15810	PF08534	Redoxin
AL549_15815	PF01578	AL549_15815
AL549_15815	PF16327	AL549_15815
AL549_15820	PF03100	CcmE
AL549_15825	PF04995	AL549_15825
AL549_15830	PF01578	AL549_15830
AL549_15835	PF03379	AL549_15835
AL549_15840	PF00005	ABC transporter
AL549_15845	PF10975	AL549_15845
AL549_15850	PF01584	CheW-like domain
AL549_15855	PF01584	CheW-like domain
AL549_15860	PF13614	AAA domain
AL549_15865	PF00072	Response regulator receiver domain
AL549_15865	PF01339	CheB methylesterase
AL549_15870	PF01584	CheW-like domain
AL549_15870	PF01627	Hpt domain
AL549_15870	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_15870	PF02895	Signal transducing histidine kinase, homodimeric domain
AL549_15875	PF04344	Chemotaxis phosphatase, CheZ
AL549_15880	PF00072	Response regulator receiver domain
AL549_15885	PF04539	Sigma-70 region 3
AL549_15885	PF04542	Sigma-70 region 2
AL549_15885	PF04545	Sigma-70, region 4
AL549_15890	PF10609	ParA/MinD ATPase like
AL549_15895	PF00448	SRP54-type protein, GTPase domain
AL549_15900	PF00771	FHIPEP family
AL549_15905	PF01312	FlhB HrpN YscU SpaS Family
AL549_15910	PF01311	AL549_15910
AL549_15915	PF01313	AL549_15915
AL549_15920	PF00813	AL549_15920
AL549_15925	PF04347	AL549_15925
AL549_15930	PF01052	Surface presentation of antigens (SPOA)
AL549_15935	PF01052	Surface presentation of antigens (SPOA)
AL549_15935	PF02154	Flagellar motor switch protein FliM
AL549_15940	PF03748	AL549_15940
AL549_15945	PF02120	Flagellar hook-length control protein FliK
AL549_15950	PF02050	Flagellar FliJ protein
AL549_15955	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_15960	PF02108	AL549_15960
AL549_15965	PF01706	FliG C-terminal domain
AL549_15965	PF14841	FliG middle domain
AL549_15965	PF14842	FliG N-terminal domain
AL549_15970	PF01514	Secretory protein of YscJ/FliF family
AL549_15970	PF08345	AL549_15970
AL549_15975	PF02049	AL549_15975
AL549_15980	PF00072	Response regulator receiver domain
AL549_15980	PF00158	Sigma-54 interaction domain
AL549_15980	PF02954	Bacterial regulatory protein, Fis family
AL549_15985	PF00512	His Kinase A (phospho-acceptor) domain
AL549_15985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_15985	PF13188	PAS domain
AL549_15990	PF00158	Sigma-54 interaction domain
AL549_15990	PF02954	Bacterial regulatory protein, Fis family
AL549_15990	PF06490	AL549_15990
AL549_15995	PF02561	Flagellar protein FliS
AL549_16005	PF02465	AL549_16005
AL549_16005	PF07195	AL549_16005
AL549_16005	PF07196	Flagellin hook IN motif
AL549_16010	PF03646	FlaG protein
AL549_16015	PF00669	Bacterial flagellin N-terminal helical region
AL549_16015	PF00700	Bacterial flagellin C-terminal helical region
AL549_16015	PF07196	Flagellin hook IN motif
AL549_16020	PF00669	Bacterial flagellin N-terminal helical region
AL549_16020	PF00700	Bacterial flagellin C-terminal helical region
AL549_16020	PF07196	Flagellin hook IN motif
AL549_16025	PF00669	Bacterial flagellin N-terminal helical region
AL549_16025	PF00700	Bacterial flagellin C-terminal helical region
AL549_16025	PF07196	Flagellin hook IN motif
AL549_16030	PF04261	Dyp-type peroxidase family
AL549_16035	PF11143	AL549_16035
AL549_16040	PF11169	AL549_16040
AL549_16045	PF13698	AL549_16045
AL549_16050	PF09904	Winged helix-turn helix
AL549_16055	PF03960	ArsC family
AL549_16060	PF01546	Peptidase family M20/M25/M40
AL549_16060	PF07687	Peptidase dimerisation domain
AL549_16065	PF02557	D-alanyl-D-alanine carboxypeptidase
AL549_16070	PF11446	AL549_16070
AL549_16075	PF01609	Transposase DDE domain
AL549_16075	PF13006	AL549_16075
AL549_16080	PF06804	NlpB/DapX lipoprotein
AL549_16085	PF00701	Dihydrodipicolinate synthetase family
AL549_16090	PF13740	ACT domain
AL549_16095	PF00578	AhpC/TSA family
AL549_16100	PF01594	AL549_16100
AL549_16105	PF01206	Sulfurtransferase TusA
AL549_16110	PF01435	Peptidase family M48
AL549_16110	PF14559	Tetratricopeptide repeat
AL549_16115	PF03960	ArsC family
AL549_16120	PF03358	NADPH-dependent FMN reductase
AL549_16125	PF09842	AL549_16125
AL549_16130	PF09839	AL549_16130
AL549_16135	PF00860	Permease family
AL549_16140	PF14681	Uracil phosphoribosyltransferase
AL549_16145	PF00586	AIR synthase related protein, N-terminal domain
AL549_16145	PF02769	AIR synthase related protein, C-terminal domain
AL549_16150	PF00551	Formyl transferase
AL549_16155	PF13230	Glutamine amidotransferases class-II
AL549_16160	PF13580	SIS domain
AL549_16165	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL549_16165	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL549_16165	PF09317	AL549_16165
AL549_16185	PF00999	Sodium/hydrogen exchanger family
AL549_16185	PF02254	TrkA-N domain
AL549_16190	PF02525	Flavodoxin-like fold
AL549_16200	PF00929	Exonuclease
AL549_16205	PF00075	RNase H
AL549_16210	PF08241	Methyltransferase domain
AL549_16215	PF00753	Metallo-beta-lactamase superfamily
AL549_16215	PF16123	AL549_16215
AL549_16220	PF01464	Transglycosylase SLT domain
AL549_16220	PF01476	LysM domain
AL549_16220	PF06474	AL549_16220
AL549_16225	PF06930	AL549_16225
AL549_16230	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_16235	PF00543	Nitrogen regulatory protein P-II
AL549_16240	PF00034	Cytochrome c
AL549_16245	PF01171	PP-loop family
AL549_16245	PF09179	TilS substrate binding domain
AL549_16245	PF11734	TilS substrate C-terminal domain
AL549_16250	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AL549_16255	PF01336	OB-fold nucleic acid binding domain
AL549_16255	PF02811	PHP domain
AL549_16255	PF07733	Bacterial DNA polymerase III alpha subunit
AL549_16255	PF14579	Helix-hairpin-helix motif
AL549_16260	PF01351	Ribonuclease HII
AL549_16265	PF02684	AL549_16265
AL549_16270	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_16270	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AL549_16275	PF07977	FabA-like domain
AL549_16280	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_16280	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
AL549_16285	PF03938	Outer membrane protein (OmpH-like)
AL549_16290	PF01103	Surface antigen
AL549_16290	PF07244	Surface antigen variable number repeat
AL549_16300	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL549_16300	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AL549_16300	PF13288	DXP reductoisomerase C-terminal domain
AL549_16305	PF01148	Cytidylyltransferase family
AL549_16310	PF01255	Putative undecaprenyl diphosphate synthase
AL549_16315	PF01765	Ribosome recycling factor
AL549_16320	PF00696	Amino acid kinase family
AL549_16325	PF00889	Elongation factor TS
AL549_16330	PF00318	Ribosomal protein S2
AL549_16335	PF00557	Metallopeptidase family M24
AL549_16340	PF01909	Nucleotidyltransferase domain
AL549_16340	PF01966	HD domain
AL549_16340	PF08335	GlnD PII-uridylyltransferase
AL549_16345	PF11944	AL549_16345
AL549_16350	PF00849	RNA pseudouridylate synthase
AL549_16355	PF04287	tRNA pseudouridine synthase C
AL549_16360	PF12069	AL549_16360
AL549_16365	PF11743	AL549_16365
AL549_16370	PF13302	Acetyltransferase (GNAT) domain
AL549_16385	PF02639	AL549_16385
AL549_16390	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AL549_16390	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL549_16395	PF01370	NAD dependent epimerase/dehydratase family
AL549_16400	PF00753	Metallo-beta-lactamase superfamily
AL549_16410	PF02655	ATP-grasp domain
AL549_16415	PF03806	AL549_16415
AL549_16420	PF00444	Ribosomal protein L36
AL549_16425	PF01197	Ribosomal protein L31
AL549_16430	PF01980	Uncharacterised protein family UPF0066
AL549_16435	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL549_16435	PF03129	Anticodon binding domain
AL549_16435	PF04073	Aminoacyl-tRNA editing domain
AL549_16440	PF04391	AL549_16440
AL549_16445	PF06786	AL549_16445
AL549_16450	PF14056	AL549_16450
AL549_16455	PF00209	Sodium:neurotransmitter symporter family
AL549_16460	PF00704	Glycosyl hydrolases family 18
AL549_16465	PF11101	AL549_16465
AL549_16470	PF00270	DEAD/DEAH box helicase
AL549_16470	PF00271	Helicase conserved C-terminal domain
AL549_16470	PF16124	AL549_16470
AL549_16475	PF00817	impB/mucB/samB family
AL549_16475	PF11799	impB/mucB/samB family C-terminal domain
AL549_16480	PF00072	Response regulator receiver domain
AL549_16480	PF00990	GGDEF domain
AL549_16485	PF04400	AL549_16485
AL549_16490	PF02424	ApbE family
AL549_16495	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_16495	PF00175	Oxidoreductase NAD-binding domain
AL549_16495	PF00970	Oxidoreductase FAD-binding domain
AL549_16500	PF02508	AL549_16500
AL549_16505	PF02508	AL549_16505
AL549_16510	PF04205	FMN-binding domain
AL549_16515	PF03116	AL549_16515
AL549_16520	PF05896	AL549_16520
AL549_16520	PF11973	AL549_16520
AL549_16525	PF01722	BolA-like protein
AL549_16530	PF05175	Methyltransferase small domain
AL549_16530	PF08468	Methyltransferase small domain N-terminal
AL549_16535	PF03923	AL549_16535
AL549_16540	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL549_16545	PF07690	Major Facilitator Superfamily
AL549_16550	PF12973	ChrR Cupin-like domain
AL549_16550	PF13490	Putative zinc-finger
AL549_16555	PF04542	Sigma-70 region 2
AL549_16555	PF04545	Sigma-70, region 4
AL549_16560	PF02190	ATP-dependent protease La (LON) domain
AL549_16565	PF03502	Nucleoside-specific channel-forming protein, Tsx
AL549_16570	PF02558	Ketopantoate reductase PanE/ApbA
AL549_16570	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL549_16575	PF01965	DJ-1/PfpI family
AL549_16580	PF00266	Aminotransferase class-V
AL549_16585	PF02657	Fe-S metabolism associated domain
AL549_16590	PF00899	ThiF family
AL549_16595	PF03562	MltA specific insert domain
AL549_16595	PF06725	3D domain
AL549_16600	PF11012	AL549_16600
AL549_16605	PF00583	Acetyltransferase (GNAT) family
AL549_16605	PF00696	Amino acid kinase family
AL549_16615	PF13538	UvrD-like helicase C-terminal domain
AL549_16615	PF13604	AAA domain
AL549_16620	PF00580	UvrD/REP helicase N-terminal domain
AL549_16620	PF12705	PD-(D/E)XK nuclease superfamily
AL549_16620	PF13361	UvrD-like helicase C-terminal domain
AL549_16625	PF04257	Exodeoxyribonuclease V, gamma subunit
AL549_16630	PF00884	Sulfatase
AL549_16630	PF11893	AL549_16630
AL549_16635	PF03595	Voltage-dependent anion channel
AL549_16640	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_16640	PF03466	LysR substrate binding domain
AL549_16645	PF07130	YebG protein
AL549_16650	PF14602	Hexapeptide repeat of succinyl-transferase
AL549_16650	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
AL549_16655	PF00230	Major intrinsic protein
AL549_16660	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL549_16660	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL549_16665	PF00455	AL549_16665
AL549_16665	PF08220	DeoR-like helix-turn-helix domain
AL549_16670	PF01266	FAD dependent oxidoreductase
AL549_16670	PF16901	AL549_16670
AL549_16675	PF01544	CorA-like Mg2+ transporter protein
AL549_16680	PF11814	AL549_16680
AL549_16680	PF13673	Acetyltransferase (GNAT) domain
AL549_16685	PF08443	RimK-like ATP-grasp domain
AL549_16685	PF14401	AL549_16685
AL549_16690	PF05940	AL549_16690
AL549_16695	PF06094	AIG2-like family
AL549_16700	PF13505	Outer membrane protein beta-barrel domain
AL549_16705	PF01588	Putative tRNA binding domain
AL549_16710	PF00356	Bacterial regulatory proteins, lacI family
AL549_16710	PF13377	Periplasmic binding protein-like domain
AL549_16715	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_16715	PF00672	HAMP domain
AL549_16715	PF17200	AL549_16715
AL549_16720	PF01263	Aldose 1-epimerase
AL549_16725	PF00288	GHMP kinases N terminal domain
AL549_16725	PF08544	GHMP kinases C terminal
AL549_16725	PF10509	Galactokinase galactose-binding signature
AL549_16730	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL549_16730	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL549_16735	PF16363	AL549_16735
AL549_16740	PF00356	Bacterial regulatory proteins, lacI family
AL549_16740	PF13377	Periplasmic binding protein-like domain
AL549_16745	PF13472	GDSL-like Lipase/Acylhydrolase family
AL549_16750	PF00703	Glycosyl hydrolases family 2
AL549_16750	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AL549_16750	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AL549_16750	PF02929	Beta galactosidase small chain
AL549_16750	PF16353	AL549_16750
AL549_16755	PF04074	Domain of unknown function (DUF386)
AL549_16760	PF13520	Amino acid permease
AL549_16765	PF13520	Amino acid permease
AL549_16770	PF01204	Trehalase
AL549_16780	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_16780	PF03466	LysR substrate binding domain
AL549_16785	PF02417	AL549_16785
AL549_16790	PF07719	Tetratricopeptide repeat
AL549_16790	PF13181	Tetratricopeptide repeat
AL549_16790	PF13432	Tetratricopeptide repeat
AL549_16795	PF00482	Type II secretion system (T2SS), protein F
AL549_16800	PF00482	Type II secretion system (T2SS), protein F
AL549_16805	PF00437	Type II/IV secretion system protein
AL549_16815	PF07811	AL549_16815
AL549_16820	PF07811	AL549_16820
AL549_16825	PF13400	AL549_16825
AL549_16835	PF00263	AL549_16835
AL549_16835	PF13629	AL549_16835
AL549_16840	PF08666	SAF domain
AL549_16840	PF16976	AL549_16840
AL549_16850	PF01478	Type IV leader peptidase family
AL549_16865	PF12833	Helix-turn-helix domain
AL549_16870	PF00501	AMP-binding enzyme
AL549_16875	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_16875	PF03466	LysR substrate binding domain
AL549_16880	PF00009	Elongation factor Tu GTP binding domain
AL549_16880	PF00679	Elongation factor G C-terminus
AL549_16880	PF03144	Elongation factor Tu domain 2
AL549_16880	PF03764	Elongation factor G, domain IV
AL549_16880	PF14492	Elongation Factor G, domain II
AL549_16885	PF12710	haloacid dehalogenase-like hydrolase
AL549_16895	PF00990	GGDEF domain
AL549_16895	PF07695	AL549_16895
AL549_16900	PF13481	AAA domain
AL549_16900	PF13541	Subunit ChlI of Mg-chelatase
AL549_16905	PF07238	PilZ domain
AL549_16910	PF00702	haloacid dehalogenase-like hydrolase
AL549_16915	PF10144	AL549_16915
AL549_16920	PF01048	Phosphorylase superfamily
AL549_16925	PF01676	Metalloenzyme superfamily
AL549_16930	PF00591	Glycosyl transferase family, a/b domain
AL549_16930	PF02885	Glycosyl transferase family, helical bundle domain
AL549_16930	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AL549_16935	PF01791	DeoC/LacD family aldolase
AL549_16940	PF01773	Na+ dependent nucleoside transporter N-terminus
AL549_16940	PF07662	Na+ dependent nucleoside transporter C-terminus
AL549_16940	PF07670	Nucleoside recognition
AL549_16945	PF01026	TatD related DNase
AL549_16950	PF00009	Elongation factor Tu GTP binding domain
AL549_16950	PF03144	Elongation factor Tu domain 2
AL549_16950	PF16658	AL549_16950
AL549_16955	PF00990	GGDEF domain
AL549_16960	PF00563	EAL domain
AL549_16960	PF00990	GGDEF domain
AL549_16965	PF00583	Acetyltransferase (GNAT) family
AL549_16970	PF03603	DNA polymerase III psi subunit
AL549_16975	PF13527	Acetyltransferase (GNAT) domain
AL549_16980	PF02036	SCP-2 sterol transfer family
AL549_16985	PF00563	EAL domain
AL549_16985	PF00990	GGDEF domain
AL549_16985	PF08448	PAS fold
AL549_16985	PF13188	PAS domain
AL549_16990	PF01136	AL549_16990
AL549_16995	PF01136	AL549_16995
AL549_17000	PF01554	MatE
AL549_17005	PF01047	MarR family
AL549_17010	PF13176	Tetratricopeptide repeat
AL549_17015	PF00013	KH domain
AL549_17015	PF00575	S1 RNA binding domain
AL549_17015	PF01138	3' exoribonuclease family, domain 1
AL549_17015	PF03725	3' exoribonuclease family, domain 2
AL549_17015	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AL549_17035	PF05488	PAAR motif
AL549_17040	PF00312	Ribosomal protein S15
AL549_17045	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AL549_17045	PF09157	Pseudouridine synthase II TruB, C-terminal
AL549_17045	PF16198	AL549_17045
AL549_17050	PF02033	Ribosome-binding factor A
AL549_17055	PF00009	Elongation factor Tu GTP binding domain
AL549_17055	PF04760	Translation initiation factor IF-2, N-terminal region
AL549_17055	PF08364	AL549_17055
AL549_17055	PF11987	Translation-initiation factor 2
AL549_17060	PF08529	NusA N-terminal domain
AL549_17060	PF13184	NusA-like KH domain
AL549_17060	PF14520	Helix-hairpin-helix domain
AL549_17065	PF02576	Uncharacterised BCR, YhbC family COG0779
AL549_17065	PF17384	AL549_17065
AL549_17080	PF03840	Preprotein translocase SecG subunit
AL549_17085	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_17085	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_17085	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_17085	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_17090	PF00809	Pterin binding enzyme
AL549_17095	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_17095	PF01434	Peptidase family M41
AL549_17095	PF06480	FtsH Extracellular
AL549_17100	PF01728	FtsJ-like methyltransferase
AL549_17105	PF01985	CRS1 / YhbY (CRM) domain
AL549_17110	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL549_17110	PF03449	Transcription elongation factor, N-terminal
AL549_17120	PF13609	Gram-negative porin
AL549_17125	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AL549_17130	PF04304	AL549_17130
AL549_17135	PF00579	tRNA synthetases class I (W and Y)
AL549_17140	PF01551	Peptidase family M23
AL549_17140	PF04225	Opacity-associated protein A LysM-like domain
AL549_17140	PF08525	AL549_17140
AL549_17145	PF00873	AcrB/AcrD/AcrF family
AL549_17150	PF16576	AL549_17150
AL549_17155	PF01521	Iron-sulphur cluster biosynthesis
AL549_17160	PF00202	Aminotransferase class-III
AL549_17165	PF01594	AL549_17165
AL549_17170	PF05175	Methyltransferase small domain
AL549_17170	PF08468	Methyltransferase small domain N-terminal
AL549_17175	PF00072	Response regulator receiver domain
AL549_17175	PF00512	His Kinase A (phospho-acceptor) domain
AL549_17175	PF00672	HAMP domain
AL549_17175	PF00989	PAS fold
AL549_17175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_17180	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_17185	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_17190	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_17195	PF00005	ABC transporter
AL549_17195	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_17200	PF00005	ABC transporter
AL549_17200	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_17205	PF00759	Glycosyl hydrolase family 9
AL549_17205	PF02927	N-terminal ig-like domain of cellulase
AL549_17210	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AL549_17215	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL549_17215	PF02838	Glycosyl hydrolase family 20, domain 2
AL549_17220	PF06165	Glycosyltransferase family 36
AL549_17220	PF17167	AL549_17220
AL549_17225	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL549_17225	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL549_17225	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL549_17225	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL549_17230	PF00005	ABC transporter
AL549_17230	PF08402	TOBE domain
AL549_17235	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_17240	PF13343	Bacterial extracellular solute-binding protein
AL549_17245	PF00909	Ammonium Transporter Family
AL549_17250	PF00543	Nitrogen regulatory protein P-II
AL549_17255	PF06062	AL549_17255
AL549_17260	PF05651	AL549_17260
AL549_17260	PF13556	PucR C-terminal helix-turn-helix domain
AL549_17265	PF02447	AL549_17265
AL549_17270	PF02595	Glycerate kinase family
AL549_17275	PF00330	Aconitase family (aconitate hydratase)
AL549_17275	PF06434	Aconitate hydratase 2 N-terminus
AL549_17275	PF11791	Aconitate B N-terminal domain
AL549_17280	PF01103	Surface antigen
AL549_17280	PF01734	Patatin-like phospholipase
AL549_17280	PF07244	Surface antigen variable number repeat
AL549_17285	PF00905	Penicillin binding protein transpeptidase domain
AL549_17285	PF00912	Transglycosylase
AL549_17285	PF14814	Bifunctional transglycosylase second domain
AL549_17290	PF00270	DEAD/DEAH box helicase
AL549_17290	PF00271	Helicase conserved C-terminal domain
AL549_17290	PF04408	Helicase associated domain (HA2)
AL549_17290	PF08482	AL549_17290
AL549_17295	PF03749	Sugar fermentation stimulation protein
AL549_17300	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL549_17305	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL549_17310	PF01743	Poly A polymerase head domain
AL549_17310	PF12626	Polymerase A arginine-rich C-terminus
AL549_17310	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL549_17315	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL549_17320	PF02548	Ketopantoate hydroxymethyltransferase
AL549_17325	PF02569	Pantoate-beta-alanine ligase
AL549_17330	PF01061	AL549_17330
AL549_17335	PF00005	ABC transporter
AL549_17340	PF00916	AL549_17340
AL549_17340	PF01740	STAS domain
AL549_17345	PF00484	Carbonic anhydrase
AL549_17350	PF00156	Phosphoribosyl transferase domain
AL549_17355	PF00440	Bacterial regulatory proteins, tetR family
AL549_17360	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_17360	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_17365	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL549_17365	PF00364	Biotin-requiring enzyme
AL549_17365	PF02817	e3 binding domain
AL549_17370	PF00456	Transketolase, thiamine diphosphate binding domain
AL549_17375	PF00392	Bacterial regulatory proteins, gntR family
AL549_17375	PF07729	FCD domain
AL549_17380	PF01510	N-acetylmuramoyl-L-alanine amidase
AL549_17385	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AL549_17385	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AL549_17390	PF00114	Pilin (bacterial filament)
AL549_17390	PF07963	Prokaryotic N-terminal methylation motif
AL549_17395	PF00437	Type II/IV secretion system protein
AL549_17395	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL549_17400	PF00482	Type II secretion system (T2SS), protein F
AL549_17405	PF01478	Type IV leader peptidase family
AL549_17405	PF06750	AL549_17405
AL549_17410	PF01121	Dephospho-CoA kinase
AL549_17415	PF07072	Protein of unknown function (DUF1342)
AL549_17420	PF03884	Domain of unknown function (DUF329)
AL549_17425	PF01245	Ribosomal protein L19
AL549_17430	PF01746	tRNA (Guanine-1)-methyltransferase
AL549_17435	PF01782	RimM N-terminal domain
AL549_17435	PF05239	PRC-barrel domain
AL549_17440	PF00886	Ribosomal protein S16
AL549_17445	PF00448	SRP54-type protein, GTPase domain
AL549_17445	PF02881	SRP54-type protein, helical bundle domain
AL549_17445	PF02978	Signal peptide binding domain
AL549_17450	PF01578	AL549_17450
AL549_17455	PF00571	CBS domain
AL549_17455	PF01595	AL549_17455
AL549_17455	PF03471	Transporter associated domain
AL549_17460	PF02664	S-Ribosylhomocysteinase (LuxS)
AL549_17470	PF04262	Glutamate-cysteine ligase
AL549_17475	PF00675	Insulinase (Peptidase family M16)
AL549_17475	PF05193	Peptidase M16 inactive domain
AL549_17480	PF09335	AL549_17480
AL549_17485	PF08240	Alcohol dehydrogenase GroES-like domain
AL549_17485	PF13602	Zinc-binding dehydrogenase
AL549_17490	PF03977	AL549_17490
AL549_17495	PF00364	Biotin-requiring enzyme
AL549_17495	PF00682	HMGL-like
AL549_17495	PF02436	Conserved carboxylase domain
AL549_17500	PF04277	AL549_17500
AL549_17545	PF02599	Global regulator protein family
AL549_17550	PF00696	Amino acid kinase family
AL549_17555	PF01411	tRNA synthetases class II (A)
AL549_17555	PF02272	DHHA1 domain
AL549_17555	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL549_17560	PF02631	RecX family
AL549_17565	PF00154	recA bacterial DNA recombination protein
AL549_17570	PF02464	Competence-damaged protein
AL549_17575	PF00488	MutS domain V
AL549_17575	PF01624	MutS domain I
AL549_17575	PF05188	MutS domain II
AL549_17575	PF05190	MutS family domain IV
AL549_17575	PF05192	MutS domain III
AL549_17580	PF00140	Sigma-70 factor, region 1
AL549_17580	PF04539	Sigma-70 region 3
AL549_17580	PF04542	Sigma-70 region 2
AL549_17580	PF04545	Sigma-70, region 4
AL549_17585	PF01476	LysM domain
AL549_17585	PF01551	Peptidase family M23
AL549_17590	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AL549_17595	PF01975	Survival protein SurE
AL549_17600	PF01142	tRNA pseudouridine synthase D (TruD)
AL549_17605	PF02542	YgbB family
AL549_17610	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AL549_17615	PF04977	Septum formation initiator
AL549_17620	PF00113	Enolase, C-terminal TIM barrel domain
AL549_17620	PF03952	Enolase, N-terminal domain
AL549_17625	PF00117	Glutamine amidotransferase class-I
AL549_17625	PF06418	CTP synthase N-terminus
AL549_17630	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL549_17635	PF02824	TGS domain
AL549_17635	PF04607	Region found in RelA / SpoT proteins
AL549_17635	PF13291	ACT domain
AL549_17635	PF13328	HD domain
AL549_17640	PF01938	TRAM domain
AL549_17640	PF05958	tRNA (Uracil-5-)-methyltransferase
AL549_17645	PF00072	Response regulator receiver domain
AL549_17645	PF00512	His Kinase A (phospho-acceptor) domain
AL549_17645	PF01627	Hpt domain
AL549_17645	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_17645	PF09984	AL549_17645
AL549_17650	PF00990	GGDEF domain
AL549_17665	PF01648	4'-phosphopantetheinyl transferase superfamily
AL549_17670	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AL549_17675	PF02565	Recombination protein O C terminal
AL549_17675	PF11967	Recombination protein O N terminal
AL549_17680	PF01926	50S ribosome-binding GTPase
AL549_17680	PF07650	KH domain
AL549_17685	PF00035	Double-stranded RNA binding motif
AL549_17685	PF14622	Ribonuclease-III-like
AL549_17690	PF00717	Peptidase S24-like
AL549_17690	PF10502	Signal peptidase, peptidase S26
AL549_17695	PF00009	Elongation factor Tu GTP binding domain
AL549_17695	PF00679	Elongation factor G C-terminus
AL549_17695	PF03144	Elongation factor Tu domain 2
AL549_17695	PF06421	GTP-binding protein LepA C-terminus
AL549_17700	PF04246	AL549_17700
AL549_17705	PF03888	MucB/RseB family
AL549_17705	PF17188	AL549_17705
AL549_17710	PF03872	Anti sigma-E protein RseA, N-terminal domain
AL549_17710	PF03873	Anti sigma-E protein RseA, C-terminal domain
AL549_17715	PF04542	Sigma-70 region 2
AL549_17715	PF08281	Sigma-70, region 4
AL549_17720	PF00890	FAD binding domain
AL549_17720	PF02910	Fumarate reductase flavoprotein C-term
AL549_17730	PF03937	Flavinator of succinate dehydrogenase
AL549_17735	PF01571	Aminomethyltransferase folate-binding domain
AL549_17740	PF04073	Aminoacyl-tRNA editing domain
AL549_17745	PF06526	Protein of unknown function (DUF1107)
AL549_17750	PF01494	FAD binding domain
AL549_17755	PF01494	FAD binding domain
AL549_17760	PF03695	Uncharacterised protein family (UPF0149)
AL549_17765	PF05164	Cell division protein ZapA
AL549_17775	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AL549_17780	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AL549_17785	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_17785	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_17790	PF04402	Protein of unknown function (DUF541)
AL549_17795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_17795	PF03466	LysR substrate binding domain
AL549_17800	PF01810	AL549_17800
AL549_17805	PF00924	Mechanosensitive ion channel
AL549_17805	PF05552	Conserved TM helix
AL549_17810	PF01116	Fructose-bisphosphate aldolase class-II
AL549_17815	PF00162	Phosphoglycerate kinase
AL549_17820	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_17820	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_17830	PF00456	Transketolase, thiamine diphosphate binding domain
AL549_17830	PF02779	Transketolase, pyrimidine binding domain
AL549_17830	PF02780	Transketolase, C-terminal domain
AL549_17835	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AL549_17835	PF02772	S-adenosylmethionine synthetase, central domain
AL549_17835	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AL549_17840	PF09955	AL549_17840
AL549_17845	PF10263	AL549_17845
AL549_17845	PF17283	AL549_17845
AL549_17850	PF04231	Endonuclease I
AL549_17860	PF04452	RNA methyltransferase
AL549_17865	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL549_17865	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL549_17870	PF02622	Uncharacterized ACR, COG1678
AL549_17875	PF03652	Uncharacterised protein family (UPF0081)
AL549_17880	PF00437	Type II/IV secretion system protein
AL549_17885	PF00437	Type II/IV secretion system protein
AL549_17890	PF01168	Alanine racemase, N-terminal domain
AL549_17895	PF03807	NADP oxidoreductase coenzyme F420-dependent
AL549_17895	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AL549_17900	PF02325	AL549_17900
AL549_17905	PF02594	Uncharacterised ACR, YggU family COG1872
AL549_17910	PF14467	Domain of unknown function (DUF4426)
AL549_17915	PF01725	Ham1 family
AL549_17920	PF04055	Radical SAM superfamily
AL549_17920	PF06969	HemN C-terminal domain
AL549_17925	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL549_17930	PF04960	Glutaminase
AL549_17935	PF02390	Putative methyltransferase
AL549_17940	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL549_17940	PF10576	Iron-sulfur binding domain of endonuclease III
AL549_17940	PF14815	NUDIX domain
AL549_17945	PF04362	Bacterial Fe(2+) trafficking
AL549_17950	PF01464	Transglycosylase SLT domain
AL549_17950	PF11873	Domain of unknown function (DUF3393)
AL549_17970	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_17970	PF17200	AL549_17970
AL549_18010	PF00753	Metallo-beta-lactamase superfamily
AL549_18055	PF01966	HD domain
AL549_18055	PF11871	AL549_18055
AL549_18060	PF06983	3-demethylubiquinone-9 3-methyltransferase
AL549_18065	PF00356	Bacterial regulatory proteins, lacI family
AL549_18065	PF13377	Periplasmic binding protein-like domain
AL549_18070	PF04794	YdjC-like protein
AL549_18075	PF02056	Family 4 glycosyl hydrolase
AL549_18075	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AL549_18080	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AL549_18085	PF02378	Phosphotransferase system, EIIC
AL549_18090	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_18095	PF01522	Polysaccharide deacetylase
AL549_18105	PF06271	AL549_18105
AL549_18110	PF03739	AL549_18110
AL549_18115	PF03739	AL549_18115
AL549_18120	PF00883	Cytosol aminopeptidase family, catalytic domain
AL549_18120	PF02789	Cytosol aminopeptidase family, N-terminal domain
AL549_18125	PF04364	DNA polymerase III chi subunit, HolC
AL549_18130	PF00133	tRNA synthetases class I (I, L, M and V)
AL549_18130	PF08264	Anticodon-binding domain of tRNA
AL549_18130	PF10458	Valyl tRNA synthetase tRNA binding arm
AL549_18135	PF01435	Peptidase family M48
AL549_18140	PF05987	AL549_18140
AL549_18145	PF09834	AL549_18145
AL549_18150	PF13508	Acetyltransferase (GNAT) domain
AL549_18160	PF06877	Regulator of ribonuclease activity B
AL549_18165	PF02274	Amidinotransferase
AL549_18170	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL549_18170	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL549_18175	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL549_18175	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL549_18180	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
AL549_18180	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
AL549_18185	PF01042	Endoribonuclease L-PSP
AL549_18190	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL549_18190	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_18195	PF00849	RNA pseudouridylate synthase
AL549_18200	PF00176	SNF2 family N-terminal domain
AL549_18200	PF00271	Helicase conserved C-terminal domain
AL549_18200	PF12137	RNA polymerase recycling family C-terminal
AL549_18205	PF02562	PhoH-like protein
AL549_18205	PF13638	PIN domain
AL549_18210	PF01523	Putative modulator of DNA gyrase
AL549_18215	PF00795	Carbon-nitrogen hydrolase
AL549_18220	PF13116	AL549_18220
AL549_18220	PF13502	AL549_18220
AL549_18225	PF00575	S1 RNA binding domain
AL549_18225	PF10150	Ribonuclease E/G family
AL549_18230	PF02545	Maf-like protein
AL549_18235	PF04093	AL549_18235
AL549_18240	PF04085	rod shape-determining protein MreC
AL549_18245	PF06723	MreB/Mbl protein
AL549_18260	PF07963	Prokaryotic N-terminal methylation motif
AL549_18265	PF07963	Prokaryotic N-terminal methylation motif
AL549_18270	PF07963	Prokaryotic N-terminal methylation motif
AL549_18275	PF07963	Prokaryotic N-terminal methylation motif
AL549_18280	PF07963	Prokaryotic N-terminal methylation motif
AL549_18290	PF00482	Type II secretion system (T2SS), protein F
AL549_18295	PF00437	Type II/IV secretion system protein
AL549_18295	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL549_18300	PF14559	Tetratricopeptide repeat
AL549_18305	PF13401	AAA domain
AL549_18310	PF00263	AL549_18310
AL549_18310	PF07655	AL549_18310
AL549_18320	PF04612	Type II secretion system (T2SS), protein M
AL549_18330	PF00563	EAL domain
AL549_18330	PF00990	GGDEF domain
AL549_18330	PF17157	AL549_18330
AL549_18335	PF00436	Single-strand binding protein family
AL549_18340	PF00196	Bacterial regulatory proteins, luxR family
AL549_18345	PF00483	Nucleotidyl transferase
AL549_18350	PF00005	ABC transporter
AL549_18355	PF04932	AL549_18355
AL549_18355	PF11846	AL549_18355
AL549_18355	PF15864	AL549_18355
AL549_18360	PF00266	Aminotransferase class-V
AL549_18365	PF00696	Amino acid kinase family
AL549_18370	PF00809	Pterin binding enzyme
AL549_18370	PF02310	B12 binding domain
AL549_18370	PF02574	Homocysteine S-methyltransferase
AL549_18370	PF02607	B12 binding domain
AL549_18370	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AL549_18375	PF00999	Sodium/hydrogen exchanger family
AL549_18380	PF00989	PAS fold
AL549_18380	PF00990	GGDEF domain
AL549_18385	PF08495	AL549_18385
AL549_18385	PF10442	AL549_18385
AL549_18445	PF01507	Phosphoadenosine phosphosulfate reductase family
AL549_18450	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL549_18450	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL549_18455	PF00175	Oxidoreductase NAD-binding domain
AL549_18455	PF00258	Flavodoxin
AL549_18455	PF00667	FAD binding domain
AL549_18470	PF09583	AL549_18470
AL549_18475	PF01207	Dihydrouridine synthase (Dus)
AL549_18480	PF01475	Ferric uptake regulator family
AL549_18485	PF13690	Chemotaxis phosphatase CheX
AL549_18490	PF00342	Phosphoglucose isomerase
AL549_18495	PF01894	Uncharacterised protein family UPF0047
AL549_18500	PF01103	Surface antigen
AL549_18505	PF00842	Alanine racemase, C-terminal domain
AL549_18505	PF01168	Alanine racemase, N-terminal domain
AL549_18510	PF00772	DnaB-like helicase N terminal domain
AL549_18510	PF03796	DnaB-like helicase C terminal domain
AL549_18515	PF04338	Protein of unknown function, DUF481
AL549_18520	PF01281	Ribosomal protein L9, N-terminal domain
AL549_18520	PF03948	Ribosomal protein L9, C-terminal domain
AL549_18525	PF01084	Ribosomal protein S18
AL549_18530	PF00436	Single-strand binding protein family
AL549_18535	PF01250	Ribosomal protein S6
AL549_18540	PF00834	Ribulose-phosphate 3 epimerase family
AL549_18545	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AL549_18550	PF05036	Sporulation related domain
AL549_18550	PF13401	AAA domain
AL549_18555	PF01761	3-dehydroquinate synthase
AL549_18560	PF01202	Shikimate kinase
AL549_18565	PF00263	AL549_18565
AL549_18565	PF03958	Bacterial type II/III secretion system short domain
AL549_18565	PF07660	Secretin and TonB N terminus short domain
AL549_18570	PF04351	Pilus assembly protein, PilP
AL549_18575	PF04350	Pilus assembly protein, PilO
AL549_18580	PF05137	AL549_18580
AL549_18585	PF11104	Type IV pilus assembly protein PilM;
AL549_18590	PF00905	Penicillin binding protein transpeptidase domain
AL549_18590	PF00912	Transglycosylase
AL549_18590	PF17092	AL549_18590
AL549_18595	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_18595	PF03466	LysR substrate binding domain
AL549_18600	PF12292	AL549_18600
AL549_18605	PF00206	Lyase
AL549_18605	PF00583	Acetyltransferase (GNAT) family
AL549_18605	PF14698	Argininosuccinate lyase C-terminal
AL549_18610	PF00764	Arginosuccinate synthase
AL549_18615	PF00696	Amino acid kinase family
AL549_18620	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL549_18620	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL549_18625	PF01546	Peptidase family M20/M25/M40
AL549_18625	PF07687	Peptidase dimerisation domain
AL549_18630	PF00311	Phosphoenolpyruvate carboxylase
AL549_18635	PF03551	Transcriptional regulator PadR-like family
AL549_18635	PF10400	Virulence activator alpha C-term
AL549_18640	PF02219	Methylenetetrahydrofolate reductase
AL549_18645	PF00696	Amino acid kinase family
AL549_18645	PF00742	Homoserine dehydrogenase
AL549_18645	PF03447	Homoserine dehydrogenase, NAD binding domain
AL549_18650	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL549_18655	PF01340	Met Apo-repressor, MetJ
AL549_18660	PF00390	Malic enzyme, N-terminal domain
AL549_18660	PF03949	Malic enzyme, NAD binding domain
AL549_18665	PF01197	Ribosomal protein L31
AL549_18670	PF00270	DEAD/DEAH box helicase
AL549_18670	PF00271	Helicase conserved C-terminal domain
AL549_18675	PF00356	Bacterial regulatory proteins, lacI family
AL549_18675	PF13377	Periplasmic binding protein-like domain
AL549_18680	PF05036	Sporulation related domain
AL549_18685	PF00227	Proteasome subunit
AL549_18690	PF00004	ATPase family associated with various cellular activities (AAA)
AL549_18690	PF07724	AAA domain (Cdc48 subfamily)
AL549_18690	PF10431	C-terminal, D2-small domain, of ClpB protein
AL549_18695	PF01040	UbiA prenyltransferase family
AL549_18700	PF03737	Demethylmenaquinone methyltransferase
AL549_18705	PF06005	Protein of unknown function (DUF904)
AL549_18710	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AL549_18715	PF13412	Winged helix-turn-helix DNA-binding
AL549_18720	PF11333	AL549_18720
AL549_18725	PF05656	AL549_18725
AL549_18730	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
AL549_18735	PF00121	Triosephosphate isomerase
AL549_18740	PF16363	AL549_18740
AL549_18745	PF00210	Ferritin-like domain
AL549_18750	PF04324	BFD-like [2Fe-2S] binding domain
AL549_18755	PF00009	Elongation factor Tu GTP binding domain
AL549_18755	PF03143	Elongation factor Tu C-terminal domain
AL549_18755	PF03144	Elongation factor Tu domain 2
AL549_18760	PF00009	Elongation factor Tu GTP binding domain
AL549_18760	PF00679	Elongation factor G C-terminus
AL549_18760	PF03144	Elongation factor Tu domain 2
AL549_18760	PF03764	Elongation factor G, domain IV
AL549_18760	PF14492	Elongation Factor G, domain II
AL549_18765	PF00177	Ribosomal protein S7p/S5e
AL549_18770	PF00164	Ribosomal protein S12/S23
AL549_18775	PF04077	DsrH like protein
AL549_18780	PF02635	DsrE/DsrF-like family
AL549_18785	PF02635	DsrE/DsrF-like family
AL549_18790	PF08348	AL549_18790
AL549_18790	PF13309	AL549_18790
AL549_18795	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_18795	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL549_18800	PF13360	PQQ-like domain
AL549_18805	PF04102	SlyX
AL549_18810	PF01112	Asparaginase
AL549_18815	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_18820	PF09526	AL549_18820
AL549_18830	PF02525	Flavodoxin-like fold
AL549_18835	PF00005	ABC transporter
AL549_18835	PF12848	ABC transporter
AL549_18840	PF09523	AL549_18840
AL549_18845	PF00561	alpha/beta hydrolase fold
AL549_18850	PF06794	Uncharacterised protein family (UPF0270)
AL549_18855	PF00485	Phosphoribulokinase / Uridine kinase family
AL549_18860	PF00027	Cyclic nucleotide-binding domain
AL549_18860	PF00325	Bacterial regulatory proteins, crp family
AL549_18865	PF07063	Domain of unknown function (DUF1338)
AL549_18870	PF00171	Aldehyde dehydrogenase family
AL549_18875	PF04958	Arginine N-succinyltransferase beta subunit
AL549_18880	PF00202	Aminotransferase class-III
AL549_18885	PF00117	Glutamine amidotransferase class-I
AL549_18890	PF03372	Endonuclease/Exonuclease/phosphatase family
AL549_18900	PF00579	tRNA synthetases class I (W and Y)
AL549_18905	PF13419	Haloacid dehalogenase-like hydrolase
AL549_18910	PF00588	SpoU rRNA Methylase family
AL549_18910	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL549_18915	PF00575	S1 RNA binding domain
AL549_18915	PF00773	RNB domain
AL549_18915	PF08206	Ribonuclease B OB domain
AL549_18915	PF08461	Ribonuclease R winged-helix domain
AL549_18920	PF01979	Amidohydrolase family
AL549_18925	PF02082	Transcriptional regulator
AL549_18930	PF00042	Globin
AL549_18930	PF00175	Oxidoreductase NAD-binding domain
AL549_18930	PF00970	Oxidoreductase FAD-binding domain
AL549_18935	PF08238	Sel1 repeat
AL549_18940	PF00709	Adenylosuccinate synthetase
AL549_18945	PF09838	AL549_18945
AL549_18950	PF01145	SPFH domain / Band 7 family
AL549_18955	PF01145	SPFH domain / Band 7 family
AL549_18955	PF12221	AL549_18955
AL549_18960	PF01926	50S ribosome-binding GTPase
AL549_18960	PF13167	AL549_18960
AL549_18960	PF16360	AL549_18960
AL549_18965	PF17209	AL549_18965
AL549_18970	PF01715	IPP transferase
AL549_18975	PF01119	DNA mismatch repair protein, C-terminal domain
AL549_18975	PF08676	MutL C terminal dimerisation domain
AL549_18975	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_18980	PF01476	LysM domain
AL549_18980	PF01520	N-acetylmuramoyl-L-alanine amidase
AL549_18980	PF11741	AMIN domain
AL549_18985	PF02367	Uncharacterised P-loop hydrolase UPF0079
AL549_18990	PF08331	AL549_18990
AL549_18990	PF13484	AL549_18990
AL549_19050	PF00929	Exonuclease
AL549_19055	PF03193	Protein of unknown function, DUF258
AL549_19060	PF02666	AL549_19060
AL549_19065	PF00939	Sodium:sulfate symporter transmembrane region
AL549_19070	PF00892	EamA-like transporter family
AL549_19075	PF01676	Metalloenzyme superfamily
AL549_19075	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AL549_19080	PF00581	Rhodanese-like domain
AL549_19085	PF02556	Preprotein translocase subunit SecB
AL549_19090	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AL549_19090	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AL549_19095	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_19095	PF06426	Serine acetyltransferase, N-terminal
AL549_19100	PF01551	Peptidase family M23
AL549_19110	PF00440	Bacterial regulatory proteins, tetR family
AL549_19110	PF13972	Bacterial transcriptional repressor
AL549_19115	PF04892	AL549_19115
AL549_19120	PF00152	tRNA synthetases class II (D, K and N)
AL549_19125	PF00890	FAD binding domain
AL549_19125	PF02910	Fumarate reductase flavoprotein C-term
AL549_19130	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL549_19130	PF13183	4Fe-4S dicluster domain
AL549_19135	PF02300	Fumarate reductase subunit C
AL549_19140	PF02313	Fumarate reductase subunit D
AL549_19145	PF01145	SPFH domain / Band 7 family
AL549_19150	PF01132	Elongation factor P (EF-P) OB domain
AL549_19150	PF08207	Elongation factor P (EF-P) KOW-like domain
AL549_19150	PF09285	Elongation factor P, C-terminal
AL549_19155	PF04055	Radical SAM superfamily
AL549_19155	PF13353	4Fe-4S single cluster domain
AL549_19160	PF02308	AL549_19160
AL549_19170	PF00118	TCP-1/cpn60 chaperonin family
AL549_19175	PF00166	Chaperonin 10 Kd subunit
AL549_19180	PF01554	MatE
AL549_19185	PF00365	Phosphofructokinase
AL549_19190	PF01545	Cation efflux family
AL549_19190	PF16916	AL549_19190
AL549_19195	PF07813	LTXXQ motif family protein
AL549_19200	PF00072	Response regulator receiver domain
AL549_19200	PF00486	Transcriptional regulatory protein, C terminal
AL549_19205	PF00512	His Kinase A (phospho-acceptor) domain
AL549_19205	PF00672	HAMP domain
AL549_19205	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_19205	PF16527	AL549_19205
AL549_19210	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL549_19210	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL549_19215	PF00588	SpoU rRNA Methylase family
AL549_19220	PF04186	AL549_19220
AL549_19225	PF00206	Lyase
AL549_19225	PF10415	Fumarase C C-terminus
AL549_19230	PF03605	AL549_19230
AL549_19235	PF02683	AL549_19235
AL549_19235	PF11412	Disulphide bond corrector protein DsbC
AL549_19235	PF13899	Thioredoxin-like
AL549_19245	PF01914	AL549_19245
AL549_19250	PF13937	AL549_19250
AL549_19255	PF00474	Sodium:solute symporter family
AL549_19270	PF00072	Response regulator receiver domain
AL549_19270	PF00512	His Kinase A (phospho-acceptor) domain
AL549_19270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_19270	PF12860	AL549_19270
AL549_19275	PF12832	MFS_1 like family
AL549_19280	PF00027	Cyclic nucleotide-binding domain
AL549_19280	PF03445	AL549_19280
AL549_19280	PF10335	AL549_19280
AL549_19285	PF00929	Exonuclease
AL549_19290	PF00501	AMP-binding enzyme
AL549_19290	PF13193	AMP-binding enzyme C-terminal domain
AL549_19290	PF16177	AL549_19290
AL549_19295	PF01220	Dehydroquinase class II
AL549_19300	PF00364	Biotin-requiring enzyme
AL549_19305	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AL549_19305	PF02785	Biotin carboxylase C-terminal domain
AL549_19305	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL549_19310	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AL549_19315	PF01207	Dihydrouridine synthase (Dus)
AL549_19320	PF02954	Bacterial regulatory protein, Fis family
AL549_19325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_19325	PF00672	HAMP domain
AL549_19325	PF17200	AL549_19325
AL549_19330	PF00376	MerR family regulatory protein
AL549_19330	PF09278	MerR, DNA binding
AL549_19335	PF01808	AICARFT/IMPCHase bienzyme
AL549_19335	PF02142	MGS-like domain
AL549_19340	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AL549_19340	PF02843	Phosphoribosylglycinamide synthetase, C domain
AL549_19340	PF02844	Phosphoribosylglycinamide synthetase, N domain
AL549_19345	PF07356	AL549_19345
AL549_19350	PF00216	Bacterial DNA-binding protein
AL549_19355	PF00571	CBS domain
AL549_19355	PF01595	AL549_19355
AL549_19360	PF04222	Protein of unknown function (DUF416)
AL549_19365	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL549_19370	PF03167	Uracil DNA glycosylase superfamily
AL549_19375	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AL549_19390	PF00293	NUDIX domain
AL549_19390	PF09297	NADH pyrophosphatase zinc ribbon domain
AL549_19395	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
AL549_19400	PF00623	RNA polymerase Rpb1, domain 2
AL549_19400	PF04983	RNA polymerase Rpb1, domain 3
AL549_19400	PF04997	RNA polymerase Rpb1, domain 1
AL549_19400	PF04998	RNA polymerase Rpb1, domain 5
AL549_19400	PF05000	RNA polymerase Rpb1, domain 4
AL549_19405	PF00562	RNA polymerase Rpb2, domain 6
AL549_19405	PF04560	RNA polymerase Rpb2, domain 7
AL549_19405	PF04561	RNA polymerase Rpb2, domain 2
AL549_19405	PF04563	RNA polymerase beta subunit
AL549_19405	PF04565	RNA polymerase Rpb2, domain 3
AL549_19405	PF10385	RNA polymerase beta subunit external 1 domain
AL549_19410	PF00542	Ribosomal protein L7/L12 C-terminal domain
AL549_19410	PF16320	AL549_19410
AL549_19415	PF00466	Ribosomal protein L10
AL549_19420	PF00687	Ribosomal protein L1p/L10e family
AL549_19425	PF00298	Ribosomal protein L11, RNA binding domain
AL549_19425	PF03946	Ribosomal protein L11, N-terminal domain
AL549_19430	PF00467	KOW motif
AL549_19430	PF02357	Transcription termination factor nusG
AL549_19435	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AL549_19440	PF00009	Elongation factor Tu GTP binding domain
AL549_19440	PF03143	Elongation factor Tu C-terminal domain
AL549_19440	PF03144	Elongation factor Tu domain 2
AL549_19465	PF00485	Phosphoribulokinase / Uridine kinase family
AL549_19470	PF02237	Biotin protein ligase C terminal domain
AL549_19470	PF03099	Biotin/lipoate A/B protein ligase family
AL549_19470	PF08279	HTH domain
AL549_19475	PF01565	FAD binding domain
AL549_19475	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AL549_19480	PF13673	Acetyltransferase (GNAT) domain
AL549_19485	PF13091	PLD-like domain
AL549_19545	PF00076	RNA recognition motif
AL549_19550	PF01177	Asp/Glu/Hydantoin racemase
AL549_19555	PF01902	ATP-binding region
AL549_19560	PF00593	TonB dependent receptor
AL549_19560	PF07715	TonB-dependent Receptor Plug Domain
AL549_19565	PF05958	tRNA (Uracil-5-)-methyltransferase
AL549_19570	PF07226	AL549_19570
AL549_19575	PF00440	Bacterial regulatory proteins, tetR family
AL549_19580	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_19580	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_19585	PF04072	Leucine carboxyl methyltransferase
AL549_19590	PF00717	Peptidase S24-like
AL549_19590	PF01726	LexA DNA binding domain
AL549_19595	PF01553	Acyltransferase
AL549_19600	PF01040	UbiA prenyltransferase family
AL549_19605	PF04345	Chorismate lyase
AL549_19610	PF03748	AL549_19610
AL549_19615	PF01694	Rhomboid family
AL549_19615	PF12122	Protein of unknown function (DUF3582)
AL549_19620	PF00581	Rhodanese-like domain
AL549_19625	PF00140	Sigma-70 factor, region 1
AL549_19625	PF04542	Sigma-70 region 2
AL549_19625	PF04545	Sigma-70, region 4
AL549_19635	PF00005	ABC transporter
AL549_19640	PF00448	SRP54-type protein, GTPase domain
AL549_19640	PF02881	SRP54-type protein, helical bundle domain
AL549_19645	PF03602	Conserved hypothetical protein 95
AL549_19650	PF06611	AL549_19650
AL549_19655	PF01914	AL549_19655
AL549_19660	PF10678	AL549_19660
AL549_19665	PF07947	AL549_19665
AL549_19675	PF10694	Protein of unknown function (DUF2500)
AL549_19680	PF01757	AL549_19680
AL549_19685	PF07690	Major Facilitator Superfamily
AL549_19690	PF05706	Cyclin-dependent kinase inhibitor 3 (CDKN3)
AL549_19695	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL549_19695	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL549_19700	PF01022	Bacterial regulatory protein, arsR family
AL549_19705	PF00563	EAL domain
AL549_19705	PF08668	HDOD domain
AL549_19710	PF01810	AL549_19710
AL549_19715	PF12146	Putative lysophospholipase
AL549_19720	PF08282	haloacid dehalogenase-like hydrolase
AL549_19725	PF01878	EVE domain
AL549_19735	PF03942	AL549_19735
AL549_19740	PF00563	EAL domain
AL549_19740	PF00990	GGDEF domain
AL549_19740	PF08495	AL549_19740
AL549_19740	PF10442	AL549_19740
AL549_19745	PF00702	haloacid dehalogenase-like hydrolase
AL549_19750	PF00589	Phage integrase family
AL549_19750	PF02899	Phage integrase, N-terminal SAM-like domain
AL549_19755	PF04340	Protein of unknown function, DUF484
AL549_19760	PF01678	Diaminopimelate epimerase
AL549_19765	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL549_19765	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL549_19770	PF13627	AL549_19770
AL549_19775	PF01491	Frataxin-like domain
AL549_19780	PF01295	AL549_19780
AL549_19780	PF12633	AL549_19780
AL549_19785	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AL549_19785	PF03900	Porphobilinogen deaminase, C-terminal domain
AL549_19790	PF02602	Uroporphyrinogen-III synthase HemD
AL549_19795	PF04375	AL549_19795
AL549_19800	PF07219	AL549_19800
AL549_19805	PF03486	HI0933-like protein
AL549_19810	PF10625	AL549_19810
AL549_19815	PF00210	Ferritin-like domain
AL549_19820	PF00582	Universal stress protein family
AL549_19825	PF00892	EamA-like transporter family
AL549_19835	PF04445	Putative SAM-dependent methyltransferase
AL549_19840	PF00563	EAL domain
AL549_19840	PF00990	GGDEF domain
AL549_19840	PF13426	PAS domain
AL549_19845	PF01037	AsnC family
AL549_19845	PF13404	AsnC-type helix-turn-helix domain
AL549_19850	PF01432	Peptidase family M3
AL549_19855	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
AL549_19860	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL549_19860	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL549_19880	PF01081	KDPG and KHG aldolase
AL549_19885	PF02447	AL549_19885
AL549_19890	PF01202	Shikimate kinase
AL549_19895	PF00920	Dehydratase family
AL549_19900	PF00356	Bacterial regulatory proteins, lacI family
AL549_19900	PF13377	Periplasmic binding protein-like domain
AL549_19905	PF00072	Response regulator receiver domain
AL549_19915	PF00069	Protein kinase domain
AL549_19925	PF07638	ECF sigma factor
AL549_19945	PF05036	Sporulation related domain
AL549_19950	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_19950	PF12911	AL549_19950
AL549_19955	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_19960	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_19965	PF00005	ABC transporter
AL549_19965	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL549_19995	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
AL549_20000	PF00580	UvrD/REP helicase N-terminal domain
AL549_20000	PF13361	UvrD-like helicase C-terminal domain
AL549_20005	PF00440	Bacterial regulatory proteins, tetR family
AL549_20010	PF16576	AL549_20010
AL549_20015	PF00873	AcrB/AcrD/AcrF family
AL549_20020	PF04380	AL549_20020
AL549_20025	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AL549_20025	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AL549_20030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_20030	PF03466	LysR substrate binding domain
AL549_20075	PF12724	Flavodoxin domain
AL549_20080	PF02386	Cation transport protein
AL549_20085	PF01205	Uncharacterized protein family UPF0029
AL549_20085	PF09186	Domain of unknown function (DUF1949)
AL549_20090	PF00378	Enoyl-CoA hydratase/isomerase family
AL549_20090	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL549_20090	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL549_20095	PF00108	Thiolase, N-terminal domain
AL549_20095	PF02803	Thiolase, C-terminal domain
AL549_20100	PF00107	Zinc-binding dehydrogenase
AL549_20105	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_20105	PF03466	LysR substrate binding domain
AL549_20115	PF01206	Sulfurtransferase TusA
AL549_20125	PF01169	AL549_20125
AL549_20130	PF02091	Glycyl-tRNA synthetase alpha subunit
AL549_20135	PF02092	AL549_20135
AL549_20135	PF05746	DALR anticodon binding domain
AL549_20145	PF00155	Aminotransferase class I and II
AL549_20150	PF00563	EAL domain
AL549_20150	PF00990	GGDEF domain
AL549_20150	PF03924	CHASE domain
AL549_20155	PF00011	Hsp20/alpha crystallin family
AL549_20160	PF00204	DNA gyrase B
AL549_20160	PF00986	DNA gyrase B subunit, carboxyl terminus
AL549_20160	PF01751	Toprim domain
AL549_20160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_20165	PF02463	RecF/RecN/SMC N terminal domain
AL549_20170	PF00712	DNA polymerase III beta subunit, N-terminal domain
AL549_20170	PF02767	DNA polymerase III beta subunit, central domain
AL549_20170	PF02768	DNA polymerase III beta subunit, C-terminal domain
AL549_20175	PF00308	Bacterial dnaA  protein
AL549_20175	PF08299	Bacterial dnaA protein helix-turn-helix
AL549_20175	PF11638	DnaA N-terminal domain
AL549_20180	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_20185	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_20190	PF00005	ABC transporter
AL549_20195	PF00468	Ribosomal protein L34
AL549_20200	PF00825	Ribonuclease P
AL549_20205	PF02096	60Kd inner membrane protein
AL549_20205	PF14849	YidC periplasmic domain
AL549_20210	PF01926	50S ribosome-binding GTPase
AL549_20210	PF10396	GTP-binding protein TrmE N-terminus
AL549_20210	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AL549_20215	PF00258	Flavodoxin
AL549_20220	PF01134	Glucose inhibited division protein A
AL549_20220	PF13932	GidA associated domain 3
AL549_20225	PF02527	rRNA small subunit methyltransferase G
AL549_20230	PF13614	AAA domain
AL549_20235	PF02195	ParB-like nuclease domain
AL549_20240	PF03899	AL549_20240
AL549_20245	PF00119	ATP synthase A chain
AL549_20250	PF00137	ATP synthase subunit C
AL549_20255	PF00430	ATP synthase B/B' CF(0)
AL549_20260	PF00213	ATP synthase delta (OSCP) subunit
AL549_20265	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_20265	PF00306	ATP synthase alpha/beta chain, C terminal domain
AL549_20265	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL549_20270	PF00231	ATP synthase
AL549_20275	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_20275	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL549_20280	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AL549_20280	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AL549_20285	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_20285	PF12804	MobA-like NTP transferase domain
AL549_20290	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_20295	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL549_20300	PF07690	Major Facilitator Superfamily
AL549_20305	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_20305	PF03466	LysR substrate binding domain
AL549_20310	PF00291	Pyridoxal-phosphate dependent enzyme
AL549_20310	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL549_20315	PF00920	Dehydratase family
AL549_20320	PF01063	Aminotransferase class IV
AL549_20325	PF13710	ACT domain
AL549_20330	PF00205	Thiamine pyrophosphate enzyme, central domain
AL549_20330	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL549_20330	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL549_20335	PF01078	Magnesium chelatase, subunit ChlI
AL549_20335	PF13335	AL549_20335
AL549_20335	PF13541	Subunit ChlI of Mg-chelatase
AL549_20340	PF11059	AL549_20340
AL549_20345	PF01553	Acyltransferase
AL549_20350	PF01323	DSBA-like thioredoxin domain
AL549_20355	PF01636	Phosphotransferase enzyme family
AL549_20360	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
AL549_20360	PF12801	AL549_20360
AL549_20360	PF13746	4Fe-4S dicluster domain
AL549_20365	PF06288	Protein of unknown function (DUF1040)
AL549_20370	PF07070	AL549_20370
AL549_20375	PF03006	AL549_20375
AL549_20380	PF02386	Cation transport protein
AL549_20385	PF02080	TrkA-C domain
AL549_20385	PF02254	TrkA-N domain
AL549_20390	PF01029	NusB family
AL549_20390	PF01189	NOL1/NOP2/sun family
AL549_20395	PF00551	Formyl transferase
AL549_20395	PF02911	Formyl transferase, C-terminal domain
AL549_20400	PF01327	Polypeptide deformylase
AL549_20405	PF01476	LysM domain
AL549_20410	PF02481	DNA recombination-mediator protein A
AL549_20415	PF04361	AL549_20415
AL549_20420	PF01396	AL549_20420
AL549_20425	PF02222	ATP-grasp domain
AL549_20430	PF00731	AIR carboxylase
AL549_20435	PF01300	Telomere recombination
AL549_20440	PF01218	Coproporphyrinogen III oxidase
AL549_20445	PF01488	Shikimate / quinate 5-dehydrogenase
AL549_20445	PF08501	Shikimate dehydrogenase substrate binding domain
AL549_20450	PF07369	Protein of unknown function (DUF1488)
AL549_20455	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_20505	PF00394	Multicopper oxidase
AL549_20505	PF07731	Multicopper oxidase
AL549_20505	PF07732	Multicopper oxidase
AL549_20505	PF10518	TAT (twin-arginine translocation) pathway signal sequence
AL549_20510	PF02537	AL549_20510
AL549_20515	PF01964	ThiC family
AL549_20515	PF13667	ThiC-associated domain
AL549_20520	PF02581	Thiamine monophosphate synthase/TENI
AL549_20525	PF00899	ThiF family
AL549_20530	PF02597	ThiS family
AL549_20535	PF05690	Thiazole biosynthesis protein ThiG
AL549_20540	PF04055	Radical SAM superfamily
AL549_20540	PF06968	Biotin and Thiamin Synthesis associated domain
AL549_20545	PF00557	Metallopeptidase family M24
AL549_20545	PF01321	Creatinase/Prolidase N-terminal domain
AL549_20545	PF16188	AL549_20545
AL549_20545	PF16189	AL549_20545
AL549_20550	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_20550	PF03466	LysR substrate binding domain
AL549_20555	PF07690	Major Facilitator Superfamily
AL549_20565	PF07681	AL549_20565
AL549_20570	PF09836	Uncharacterized protein conserved in bacteria (DUF2063)
AL549_20575	PF05114	Protein of unknown function (DUF692)
AL549_20580	PF10048	AL549_20580
AL549_20585	PF00580	UvrD/REP helicase N-terminal domain
AL549_20585	PF13361	UvrD-like helicase C-terminal domain
AL549_20590	PF01810	AL549_20590
AL549_20595	PF02311	AraC-like ligand binding domain
AL549_20595	PF12833	Helix-turn-helix domain
AL549_20600	PF00892	EamA-like transporter family
AL549_20605	PF00270	DEAD/DEAH box helicase
AL549_20605	PF00271	Helicase conserved C-terminal domain
AL549_20605	PF00570	HRDC domain
AL549_20605	PF09382	RQC domain
AL549_20605	PF16124	AL549_20605
AL549_20610	PF12305	AL549_20610
AL549_20615	PF02592	AL549_20615
AL549_20620	PF02541	Ppx/GppA phosphatase family
AL549_20625	PF00270	DEAD/DEAH box helicase
AL549_20625	PF00271	Helicase conserved C-terminal domain
AL549_20630	PF00085	Thioredoxin
AL549_20635	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL549_20635	PF07497	Rho termination factor, RNA-binding domain
AL549_20635	PF07498	Rho termination factor, N-terminal domain
AL549_20645	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL549_20650	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL549_20655	PF00175	Oxidoreductase NAD-binding domain
AL549_20735	PF08668	HDOD domain
AL549_20740	PF00892	EamA-like transporter family
AL549_20745	PF02646	AL549_20745
AL549_20750	PF01209	ubiE/COQ5 methyltransferase family
AL549_20755	PF02036	SCP-2 sterol transfer family
AL549_20760	PF03109	AL549_20760
AL549_20765	PF02416	mttA/Hcf106 family
AL549_20770	PF02416	mttA/Hcf106 family
AL549_20775	PF00902	Sec-independent protein translocase protein (TatC)
AL549_20780	PF01026	TatD related DNase
AL549_20785	PF00490	Delta-aminolevulinic acid dehydratase
AL549_20790	PF00476	DNA polymerase family A
AL549_20790	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL549_20790	PF01612	3'-5' exonuclease
AL549_20790	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL549_20795	PF01926	50S ribosome-binding GTPase
AL549_20800	PF00034	Cytochrome c
AL549_20805	PF13489	Methyltransferase domain
AL549_20810	PF04220	AL549_20810
AL549_20815	PF10675	AL549_20815
AL549_20820	PF04055	Radical SAM superfamily
AL549_20820	PF06969	HemN C-terminal domain
AL549_20825	PF00563	EAL domain
AL549_20825	PF00990	GGDEF domain
AL549_20825	PF02743	Cache domain
AL549_20830	PF00072	Response regulator receiver domain
AL549_20830	PF00158	Sigma-54 interaction domain
AL549_20830	PF02954	Bacterial regulatory protein, Fis family
AL549_20835	PF00512	His Kinase A (phospho-acceptor) domain
AL549_20835	PF00989	PAS fold
AL549_20835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_20840	PF13511	AL549_20840
AL549_20845	PF00120	Glutamine synthetase, catalytic domain
AL549_20845	PF03951	Glutamine synthetase, beta-Grasp domain
AL549_20850	PF00009	Elongation factor Tu GTP binding domain
AL549_20850	PF00679	Elongation factor G C-terminus
AL549_20850	PF03144	Elongation factor Tu domain 2
AL549_20855	PF13521	AAA domain
AL549_20860	PF11172	AL549_20860
AL549_20865	PF03631	AL549_20865
AL549_20870	PF02580	D-Tyr-tRNA(Tyr) deacylase
AL549_20875	PF00583	Acetyltransferase (GNAT) family
AL549_20875	PF09500	Putative thioesterase (yiiD_Cterm)
AL549_20880	PF05170	AL549_20880
AL549_20885	PF01293	Phosphoenolpyruvate carboxykinase
AL549_20890	PF01430	Hsp33 protein
AL549_20895	PF01479	S4 domain
AL549_20900	PF11356	Type IV pilus biogenesis
AL549_20905	PF00263	AL549_20905
AL549_20905	PF03958	Bacterial type II/III secretion system short domain
AL549_20910	PF00437	Type II/IV secretion system protein
AL549_20915	PF00482	Type II secretion system (T2SS), protein F
AL549_20920	PF07963	Prokaryotic N-terminal methylation motif
AL549_20920	PF08334	Type II secretion system (T2SS), protein G
AL549_20925	PF12019	Type II transport protein GspH
AL549_20930	PF02501	Type II secretion system (T2SS), protein I
AL549_20930	PF07963	Prokaryotic N-terminal methylation motif
AL549_20935	PF07963	Prokaryotic N-terminal methylation motif
AL549_20935	PF11612	Type II secretion system (T2SS), protein J
AL549_20940	PF03934	Type II secretion system (T2SS), protein K
AL549_20945	PF05134	Type II secretion system (T2SS), protein L
AL549_20945	PF12693	GspL periplasmic domain
AL549_20950	PF04612	Type II secretion system (T2SS), protein M
AL549_20955	PF01203	AL549_20955
AL549_20960	PF00459	Inositol monophosphatase family
AL549_20965	PF00293	NUDIX domain
AL549_20970	PF01106	NifU-like domain
AL549_20970	PF01521	Iron-sulphur cluster biosynthesis
AL549_20980	PF00561	alpha/beta hydrolase fold
AL549_20990	PF00575	S1 RNA binding domain
AL549_20990	PF09371	Tex-like protein N-terminal domain
AL549_20990	PF12836	Helix-hairpin-helix motif
AL549_20990	PF16921	AL549_20990
AL549_20995	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL549_20995	PF03449	Transcription elongation factor, N-terminal
AL549_21000	PF00072	Response regulator receiver domain
AL549_21000	PF00486	Transcriptional regulatory protein, C terminal
AL549_21005	PF00512	His Kinase A (phospho-acceptor) domain
AL549_21005	PF00672	HAMP domain
AL549_21005	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL549_21010	PF00860	Permease family
AL549_21015	PF00270	DEAD/DEAH box helicase
AL549_21015	PF00271	Helicase conserved C-terminal domain
AL549_21015	PF17191	AL549_21015
AL549_21020	PF00588	SpoU rRNA Methylase family
AL549_21020	PF12105	SpoU, rRNA methylase, C-terminal
AL549_21025	PF02824	TGS domain
AL549_21025	PF04607	Region found in RelA / SpoT proteins
AL549_21025	PF13291	ACT domain
AL549_21025	PF13328	HD domain
AL549_21030	PF01192	RNA polymerase Rpb6
AL549_21035	PF00625	Guanylate kinase
AL549_21040	PF13181	Tetratricopeptide repeat
AL549_21045	PF03544	Gram-negative bacterial TonB protein C-terminal
AL549_21050	PF02472	Biopolymer transport protein ExbD/TolR
AL549_21055	PF01618	AL549_21055
AL549_21060	PF01618	AL549_21060
AL549_21065	PF11932	AL549_21065
AL549_21070	PF00593	TonB dependent receptor
AL549_21070	PF07715	TonB-dependent Receptor Plug Domain
AL549_21075	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_21080	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_21085	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL549_21090	PF00005	ABC transporter
AL549_21095	PF00005	ABC transporter
AL549_21100	PF00884	Sulfatase
AL549_21110	PF06146	AL549_21110
AL549_21120	PF00892	EamA-like transporter family
AL549_21125	PF03755	AL549_21125
AL549_21125	PF08340	AL549_21125
AL549_21130	PF01138	3' exoribonuclease family, domain 1
AL549_21130	PF03725	3' exoribonuclease family, domain 2
AL549_21135	PF00156	Phosphoribosyl transferase domain
AL549_21140	PF03279	AL549_21140
AL549_21145	PF00440	Bacterial regulatory proteins, tetR family
AL549_21150	PF02441	Flavoprotein
AL549_21150	PF04127	DNA / pantothenate metabolism flavoprotein
AL549_21155	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL549_21155	PF00672	HAMP domain
AL549_21155	PF17200	AL549_21155
AL549_21160	PF04002	RadC-like JAB domain
AL549_21165	PF00830	Ribosomal L28 family
AL549_21170	PF00471	Ribosomal protein L33
AL549_21180	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL549_21180	PF06827	Zinc finger found in FPG and IleRS
AL549_21180	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL549_21185	PF00884	Sulfatase
AL549_21190	PF01467	Cytidylyltransferase
AL549_21195	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL549_21200	PF00535	Glycosyl transferase family 2
AL549_21205	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL549_21210	PF01219	Prokaryotic diacylglycerol kinase
AL549_21215	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
AL549_21220	PF00884	Sulfatase
AL549_21220	PF11893	AL549_21220
AL549_21225	PF01755	AL549_21225
AL549_21230	PF02719	Polysaccharide biosynthesis protein
AL549_21235	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL549_21240	PF02350	UDP-N-acetylglucosamine 2-epimerase
AL549_21245	PF03102	NeuB family
AL549_21250	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_21255	PF00483	Nucleotidyl transferase
AL549_21255	PF00571	CBS domain
AL549_21260	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL549_21265	PF00132	Bacterial transferase hexapeptide (six repeats)
AL549_21270	PF02348	Cytidylyltransferase
AL549_21275	PF13561	Enoyl-(Acyl carrier protein) reductase
AL549_21280	PF00534	Glycosyl transferases group 1
AL549_21285	PF00550	Phosphopantetheine attachment site
AL549_21290	PF00501	AMP-binding enzyme
AL549_21290	PF13193	AMP-binding enzyme C-terminal domain
AL549_21295	PF00465	Iron-containing alcohol dehydrogenase
AL549_21300	PF04443	AL549_21300
AL549_21300	PF05893	Acyl-CoA reductase (LuxC)
AL549_21310	PF01522	Polysaccharide deacetylase
AL549_21320	PF00534	Glycosyl transferases group 1
AL549_21320	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AL549_21325	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL549_21330	PF03279	AL549_21330
AL549_21335	PF01370	NAD dependent epimerase/dehydratase family
AL549_21340	PF06082	AL549_21340
AL549_21345	PF06251	Capsule biosynthesis GfcC
AL549_21350	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
AL549_21375	PF02563	Polysaccharide biosynthesis/export protein
AL549_21375	PF10531	SLBB domain
AL549_21380	PF05635	23S rRNA-intervening sequence protein
AL549_21385	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL549_21390	PF02706	Chain length determinant protein
AL549_21390	PF13614	AAA domain
AL549_21390	PF13807	AL549_21390
AL549_21405	PF01943	AL549_21405
AL549_21405	PF14667	Polysaccharide biosynthesis C-terminal domain
AL549_21410	PF04991	AL549_21410
AL549_21415	PF04991	AL549_21415
AL549_21420	PF00534	Glycosyl transferases group 1
AL549_21425	PF14296	AL549_21425
AL549_21430	PF01797	Transposase IS200 like
AL549_21435	PF13692	Glycosyl transferases group 1
AL549_21440	PF02719	Polysaccharide biosynthesis protein
AL549_21440	PF08485	Polysaccharide biosynthesis protein C-terminal
AL549_21445	PF01370	NAD dependent epimerase/dehydratase family
AL549_21450	PF02350	UDP-N-acetylglucosamine 2-epimerase
AL549_21455	PF00534	Glycosyl transferases group 1
AL549_21470	PF00953	Glycosyl transferase family 4
AL549_21475	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL549_21475	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL549_21475	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL549_21480	PF01541	GIY-YIG catalytic domain
AL549_21485	PF00753	Metallo-beta-lactamase superfamily
AL549_21485	PF07521	RNA-metabolising metallo-beta-lactamase
AL549_21485	PF10996	Beta-Casp domain
AL549_21495	PF00338	Ribosomal protein S10p/S20e
AL549_21500	PF00297	Ribosomal protein L3
AL549_21505	PF00573	Ribosomal protein L4/L1 family
AL549_21510	PF00276	Ribosomal protein L23
AL549_21515	PF00181	Ribosomal Proteins L2, RNA binding domain
AL549_21515	PF03947	Ribosomal Proteins L2, C-terminal domain
AL549_21520	PF00203	Ribosomal protein S19
AL549_21525	PF00237	Ribosomal protein L22p/L17e
AL549_21530	PF00189	Ribosomal protein S3, C-terminal domain
AL549_21530	PF07650	KH domain
AL549_21535	PF00252	Ribosomal protein L16p/L10e
AL549_21540	PF00831	Ribosomal L29 protein
AL549_21545	PF00366	Ribosomal protein S17
AL549_21550	PF00238	Ribosomal protein L14p/L23e
AL549_21555	PF00467	KOW motif
AL549_21555	PF17136	AL549_21555
AL549_21560	PF00281	Ribosomal protein L5
AL549_21560	PF00673	ribosomal L5P family C-terminus
AL549_21565	PF00253	Ribosomal protein S14p/S29e
AL549_21570	PF00410	Ribosomal protein S8
AL549_21575	PF00347	Ribosomal protein L6
AL549_21580	PF00861	Ribosomal L18p/L5e family
AL549_21585	PF00333	Ribosomal protein S5, N-terminal domain
AL549_21585	PF03719	Ribosomal protein S5, C-terminal domain
AL549_21590	PF00327	Ribosomal protein L30p/L7e
AL549_21595	PF00828	Ribosomal protein L18e/L15
AL549_21600	PF00344	SecY translocase
AL549_21605	PF00444	Ribosomal protein L36
AL549_21610	PF00416	Ribosomal protein S13/S18
AL549_21615	PF00411	Ribosomal protein S11
AL549_21620	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL549_21620	PF01479	S4 domain
AL549_21625	PF01000	RNA polymerase Rpb3/RpoA insert domain
AL549_21625	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AL549_21625	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL549_21630	PF01196	Ribosomal protein L17
AL549_21635	PF11075	AL549_21635
AL549_21640	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL549_21640	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL549_21645	PF04225	Opacity-associated protein A LysM-like domain
AL549_21645	PF08525	AL549_21645
AL549_21650	PF00892	EamA-like transporter family
AL549_21655	PF13673	Acetyltransferase (GNAT) domain
AL549_21665	PF00149	Calcineurin-like phosphoesterase
AL549_21665	PF02872	5'-nucleotidase, C-terminal domain
AL549_21670	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL549_21675	PF01507	Phosphoadenosine phosphosulfate reductase family
AL549_21680	PF00009	Elongation factor Tu GTP binding domain
AL549_21685	PF02080	TrkA-C domain
AL549_21685	PF03600	Citrate transporter
AL549_21690	PF01583	Adenylylsulphate kinase
AL549_21695	PF10987	AL549_21695
AL549_21700	PF11736	Protein of unknown function (DUF3299)
AL549_21705	PF02687	AL549_21705
AL549_21705	PF12704	MacB-like periplasmic core domain
AL549_21710	PF00005	ABC transporter
AL549_21715	PF10986	AL549_21715
AL549_21725	PF09695	AL549_21725
AL549_21730	PF06526	Protein of unknown function (DUF1107)
AL549_21735	PF01625	Peptide methionine sulfoxide reductase
AL549_21740	PF01103	Surface antigen
AL549_21740	PF07244	Surface antigen variable number repeat
AL549_21740	PF17243	AL549_21740
AL549_21745	PF04357	AL549_21745
AL549_21750	PF06094	AIG2-like family
AL549_21755	PF10973	AL549_21755
AL549_21760	PF00719	Inorganic pyrophosphatase
AL549_21765	PF00316	Fructose-1-6-bisphosphatase
AL549_21770	PF01225	Mur ligase family, catalytic domain
AL549_21770	PF02875	Mur ligase family, glutamate ligase domain
AL549_21770	PF08245	Mur ligase middle domain
AL549_21775	PF02441	Flavoprotein
AL549_21780	PF13343	Bacterial extracellular solute-binding protein
AL549_21785	PF00528	Binding-protein-dependent transport system inner membrane component
AL549_21790	PF00005	ABC transporter
AL549_21795	PF04751	Protein of unknown function (DUF615)
AL549_21800	PF01523	Putative modulator of DNA gyrase
AL549_21805	PF00571	CBS domain
AL549_21805	PF01769	Divalent cation transporter
AL549_21805	PF03448	MgtE intracellular N domain
AL549_21810	PF00381	PTS HPr component phosphorylation site
AL549_21815	PF03668	AL549_21815
AL549_21820	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_21825	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL549_21830	PF00309	AL549_21830
AL549_21830	PF04552	Sigma-54, DNA binding domain
AL549_21830	PF04963	Sigma-54 factor, core binding domain
AL549_21835	PF00005	ABC transporter
AL549_21835	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL549_21840	PF03968	OstA-like protein
AL549_21845	PF06835	Lipopolysaccharide-assembly, LptC-related
AL549_21850	PF08282	haloacid dehalogenase-like hydrolase
AL549_21855	PF00571	CBS domain
AL549_21855	PF01380	SIS domain
AL549_21860	PF01699	Sodium/calcium exchanger protein
AL549_21865	PF00005	ABC transporter
AL549_21870	PF02405	AL549_21870
AL549_21875	PF02470	AL549_21875
AL549_21880	PF05494	Toluene tolerance, Ttg2
AL549_21885	PF13466	STAS domain
AL549_21890	PF01722	BolA-like protein
AL549_21895	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL549_21900	PF01553	Acyltransferase
AL549_21905	PF00582	Universal stress protein family
AL549_21910	PF06808	AL549_21910
AL549_21910	PF11874	AL549_21910
AL549_21915	PF16868	AL549_21915
AL549_21920	PF01316	Arginine repressor, DNA binding domain
AL549_21920	PF02863	Arginine repressor, C-terminal domain
AL549_21925	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL549_21925	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL549_21930	PF00348	Polyprenyl synthetase
AL549_21935	PF00829	Ribosomal prokaryotic L21 protein
AL549_21940	PF01016	Ribosomal L27 protein
AL549_21945	PF01018	GTP1/OBG
AL549_21945	PF01926	50S ribosome-binding GTPase
AL549_21950	PF06738	AL549_21950
AL549_21955	PF12821	AL549_21955
AL549_21960	PF00186	Dihydrofolate reductase
AL549_21965	PF00149	Calcineurin-like phosphoesterase
AL549_21970	PF04379	Protein of unknown function (DUF525)
AL549_21975	PF00398	Ribosomal RNA adenine dimethylase
AL549_21980	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL549_21985	PF00639	PPIC-type PPIASE domain
AL549_21985	PF09312	SurA N-terminal domain
AL549_21985	PF13616	PPIC-type PPIASE domain
AL549_21990	PF03968	OstA-like protein
AL549_21990	PF04453	Organic solvent tolerance protein
AL549_21995	PF00226	DnaJ domain
AL549_21995	PF05099	Tellurite resistance protein TerB
AL549_22000	PF04784	AL549_22000
AL549_22005	PF00694	Aconitase C-terminal domain
AL549_22010	PF00330	Aconitase family (aconitate hydratase)
AL549_22015	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL549_22020	PF00682	HMGL-like
AL549_22020	PF08502	LeuA allosteric (dimerisation) domain
AL549_22025	PF08239	Bacterial SH3 domain
AL549_22030	PF01569	PAP2 superfamily
AL549_22035	PF13528	Glycosyl transferase family 1
AL549_22040	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL549_22040	PF03466	LysR substrate binding domain
AL549_22045	PF00501	AMP-binding enzyme
AL549_22050	PF00205	Thiamine pyrophosphate enzyme, central domain
AL549_22050	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL549_22050	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL549_22055	PF01842	ACT domain
AL549_22055	PF10369	Small subunit of acetolactate synthase
AL549_22060	PF00990	GGDEF domain
AL549_22060	PF13426	PAS domain
AL549_22065	PF00392	Bacterial regulatory proteins, gntR family
AL549_22065	PF07729	FCD domain
AL549_22070	PF00224	Pyruvate kinase, barrel domain
AL549_22070	PF02887	Pyruvate kinase, alpha/beta domain
AL549_22075	PF00455	AL549_22075
AL549_22075	PF08220	DeoR-like helix-turn-helix domain
AL549_22080	PF01380	SIS domain
AL549_22080	PF13522	Glutamine amidotransferase domain
AL549_22085	PF05068	Mannitol repressor
AL549_22090	PF01232	Mannitol dehydrogenase Rossmann domain
AL549_22090	PF08125	Mannitol dehydrogenase C-terminal domain
AL549_22095	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL549_22095	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL549_22095	PF02378	Phosphotransferase system, EIIC
AL549_22100	PF03480	Bacterial extracellular solute-binding protein, family 7
AL549_22105	PF01553	Acyltransferase
AL549_22105	PF13444	Acetyltransferase (GNAT) domain
AL549_22110	PF04402	Protein of unknown function (DUF541)
AL549_22120	PF00140	Sigma-70 factor, region 1
AL549_22120	PF03979	Sigma-70 factor, region 1
AL549_22120	PF04539	Sigma-70 region 3
AL549_22120	PF04542	Sigma-70 region 2
AL549_22120	PF04545	Sigma-70, region 4
AL549_22120	PF04546	Sigma-70, non-essential region
AL549_22125	PF01807	CHC2 zinc finger
AL549_22125	PF08275	DNA primase catalytic core, N-terminal domain
AL549_22125	PF08278	DNA primase DnaG DnaB-binding
AL549_22125	PF10410	DnaB-helicase binding domain of primase
AL549_22125	PF13155	Toprim-like
AL549_22130	PF09424	Yqey-like protein
AL549_22135	PF01165	Ribosomal protein S21
AL549_22140	PF00814	Glycoprotease family
AL549_22145	PF00561	alpha/beta hydrolase fold
AL549_22150	PF02660	AL549_22150
AL549_22155	PF02152	Dihydroneopterin aldolase
AL549_22160	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL549_22165	PF02673	AL549_22165
AL549_22170	PF01743	Poly A polymerase head domain
AL549_22170	PF01966	HD domain
AL549_22170	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL549_22175	PF01471	Putative peptidoglycan binding domain
AL549_22175	PF13401	AAA domain
AL549_22175	PF16537	AL549_22175
AL549_22180	PF08239	Bacterial SH3 domain
AL549_22185	PF01384	AL549_22185
AL549_22195	PF07603	AL549_22195
AL549_22200	PF11665	AL549_22200
AL549_22240	PF00925	GTP cyclohydrolase II
AL549_22240	PF08719	Domain of unknown function (DUF1768)
AL549_22285	PF09574	AL549_22285
AL549_22290	PF12838	4Fe-4S dicluster domain
AL549_22295	PF11137	AL549_22295
AL549_22315	PF03701	AL549_22315
AL549_22340	PF04828	Glutathione-dependent formaldehyde-activating enzyme
AL549_22365	PF11346	AL549_22365
AL549_22395	PF06945	AL549_22395
AL549_22400	PF11197	AL549_22400
AL549_22415	PF11665	AL549_22415
AL549_22420	PF11665	AL549_22420
AL549_22425	PF11665	AL549_22425
AL549_22430	PF11665	AL549_22430
AL549_22435	PF11665	AL549_22435
AL549_22445	PF11665	AL549_22445
AL549_22450	PF11665	AL549_22450
AL549_22455	PF11665	AL549_22455
AL549_22460	PF11665	AL549_22460
AL549_22470	PF11665	AL549_22470
AL549_22475	PF11665	AL549_22475
AL549_22495	PF11665	AL549_22495
AL549_22505	PF11665	AL549_22505
AL549_22530	PF11665	AL549_22530
AL549_22540	PF11665	AL549_22540
AL549_22545	PF11665	AL549_22545
AL549_22550	PF11665	AL549_22550
AL549_22555	PF11665	AL549_22555
AL549_22560	PF11665	AL549_22560
AL549_22565	PF11665	AL549_22565
AL549_22570	PF11665	AL549_22570
AL549_22575	PF11665	AL549_22575
AL549_22580	PF11665	AL549_22580
AL549_22590	PF11665	AL549_22590
AL549_22595	PF11665	AL549_22595
AL549_22600	PF11665	AL549_22600
AL549_22610	PF11665	AL549_22610
AL549_22620	PF11665	AL549_22620
AL549_22625	PF11665	AL549_22625
AL549_22635	PF11665	AL549_22635
AL549_22640	PF11665	AL549_22640
AL549_22650	PF11665	AL549_22650
AL549_22655	PF11665	AL549_22655
AL549_22680	PF11665	AL549_22680
AL549_22690	PF11665	AL549_22690
AL549_22695	PF11665	AL549_22695
AL549_22700	PF11665	AL549_22700
AL549_22705	PF11665	AL549_22705
AL549_22710	PF11665	AL549_22710
AL549_22720	PF11665	AL549_22720
AL549_22725	PF11665	AL549_22725
AL549_22730	PF11665	AL549_22730
AL549_22745	PF11665	AL549_22745
AL549_22760	PF11665	AL549_22760
AL549_22765	PF11665	AL549_22765
AL549_22770	PF11665	AL549_22770
AL549_22775	PF11665	AL549_22775
AL549_22780	PF11665	AL549_22780
AL549_22805	PF11665	AL549_22805
AL549_22810	PF11665	AL549_22810
AL549_22820	PF11665	AL549_22820
AL549_22825	PF11665	AL549_22825
AL549_22835	PF11665	AL549_22835
AL549_22845	PF11665	AL549_22845
AL549_22865	PF11665	AL549_22865
AL549_22870	PF11665	AL549_22870
AL549_22875	PF11665	AL549_22875
AL549_22890	PF14113	Domain of unknown function (DUF4285)
AL549_22895	PF11665	AL549_22895
AL549_22900	PF11665	AL549_22900
AL549_22905	PF11665	AL549_22905
AL549_22910	PF11665	AL549_22910
AL549_22915	PF11665	AL549_22915
AL549_22920	PF11665	AL549_22920
AL549_22930	PF11665	AL549_22930
AL549_22935	PF11665	AL549_22935
AL549_22955	PF11665	AL549_22955
AL549_22965	PF11665	AL549_22965
AL549_22970	PF11665	AL549_22970
AL549_22980	PF11665	AL549_22980
AL549_22985	PF11665	AL549_22985
AL549_22990	PF11665	AL549_22990
AL549_23015	PF14113	Domain of unknown function (DUF4285)
AL549_23020	PF11665	AL549_23020
AL549_23025	PF11665	AL549_23025
AL549_23050	PF11665	AL549_23050
AL549_23055	PF11665	AL549_23055
AL549_23070	PF11665	AL549_23070
AL549_23075	PF11665	AL549_23075
AL549_23085	PF11665	AL549_23085
AL549_23090	PF07119	AL549_23090
AL549_23095	PF11665	AL549_23095
AL549_23100	PF11665	AL549_23100
AL549_23105	PF11665	AL549_23105
AL549_23110	PF11665	AL549_23110
AL549_23120	PF11665	AL549_23120
AL549_23135	PF11665	AL549_23135
AL549_23140	PF11665	AL549_23140
AL549_23155	PF11665	AL549_23155
AL549_23160	PF11665	AL549_23160
AL549_23165	PF11665	AL549_23165
AL549_23175	PF11665	AL549_23175
AL549_23180	PF11665	AL549_23180
AL549_23185	PF11665	AL549_23185
AL549_23205	PF07119	AL549_23205
AL549_23215	PF11665	AL549_23215
AL549_23220	PF11665	AL549_23220
AL549_23235	PF11665	AL549_23235
AL549_23240	PF11665	AL549_23240
AL549_23260	PF11665	AL549_23260
AL549_23275	PF11665	AL549_23275
AL549_23280	PF11665	AL549_23280
AL549_23290	PF11665	AL549_23290
AL549_23300	PF11665	AL549_23300
AL549_23305	PF11665	AL549_23305
AL549_23315	PF11665	AL549_23315
AL549_23320	PF11665	AL549_23320
AL549_23330	PF11665	AL549_23330
AL549_23340	PF11665	AL549_23340
AL549_23345	PF11665	AL549_23345
AL549_23370	PF11665	AL549_23370
AL549_23380	PF11665	AL549_23380
AL549_23385	PF11665	AL549_23385
AL549_23395	PF11665	AL549_23395
AL549_23400	PF11665	AL549_23400
AL549_23405	PF11665	AL549_23405
AL549_23415	PF11665	AL549_23415
AL549_23425	PF11665	AL549_23425
AL549_23430	PF11665	AL549_23430
AL549_23445	PF11665	AL549_23445
AL549_23450	PF10544	AL549_23450
AL549_23455	PF11665	AL549_23455
AL549_23460	PF11665	AL549_23460
AL549_23480	PF11665	AL549_23480
AL549_23485	PF11665	AL549_23485
AL549_23495	PF11665	AL549_23495
AL549_23500	PF11665	AL549_23500
AL549_23505	PF11665	AL549_23505
AL549_23525	PF14113	Domain of unknown function (DUF4285)
AL549_23545	PF11665	AL549_23545
AL549_23555	PF11665	AL549_23555
AL549_23560	PF11665	AL549_23560
AL549_23570	PF11665	AL549_23570
AL549_23575	PF11665	AL549_23575
AL549_23580	PF11665	AL549_23580
AL549_23585	PF11665	AL549_23585
AL549_23610	PF11665	AL549_23610
AL549_23620	PF11665	AL549_23620
AL549_23625	PF11665	AL549_23625
AL549_23630	PF11665	AL549_23630
AL549_23635	PF11665	AL549_23635
AL549_23645	PF11665	AL549_23645
AL549_23650	PF11665	AL549_23650
AL549_23655	PF11665	AL549_23655
AL549_23660	PF11665	AL549_23660
AL549_23670	PF11665	AL549_23670
AL549_23675	PF11665	AL549_23675
AL549_23680	PF11665	AL549_23680
AL549_23705	PF11665	AL549_23705
AL549_23710	PF11665	AL549_23710
AL549_23720	PF11665	AL549_23720
AL549_23725	PF11665	AL549_23725
AL549_23730	PF11665	AL549_23730
AL549_23740	PF11665	AL549_23740
AL549_23745	PF11665	AL549_23745
AL549_23760	PF11665	AL549_23760
AL549_23765	PF11665	AL549_23765
AL549_23770	PF11665	AL549_23770
AL549_23780	PF11665	AL549_23780
AL549_23825	PF04304	AL549_23825
AL549_23840	PF06568	AL549_23840
AL549_23895	PF01809	AL549_23895
AL549_23935	PF00156	Phosphoribosyl transferase domain
AL549_23990	PF10795	AL549_23990