VV2_1288 5b75b2621227d0d40323f702c519b20b 365 Gene3D G3DSA:2.40.50.100 239 360 3.2E-14 T 14-10-2018 VV2_1288 5b75b2621227d0d40323f702c519b20b 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1288 5b75b2621227d0d40323f702c519b20b 365 SMART SM00382 28 210 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1288 5b75b2621227d0d40323f702c519b20b 365 Gene3D G3DSA:3.40.50.300 1 238 1.6E-77 T 14-10-2018 VV2_1288 5b75b2621227d0d40323f702c519b20b 365 Pfam PF00005 ABC transporter 20 161 1.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1288 5b75b2621227d0d40323f702c519b20b 365 SUPERFAMILY SSF50331 237 360 2.92E-15 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV2_1288 5b75b2621227d0d40323f702c519b20b 365 Gene3D G3DSA:2.40.50.140 283 346 3.2E-14 T 14-10-2018 VV2_1288 5b75b2621227d0d40323f702c519b20b 365 SUPERFAMILY SSF52540 4 243 1.0E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0806 8a87a7c2cc9a0ce8906865aa760eb877 331 SUPERFAMILY SSF53383 24 329 1.03E-14 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_0806 8a87a7c2cc9a0ce8906865aa760eb877 331 Gene3D G3DSA:3.40.640.10 217 329 3.2E-6 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.47 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 178 191 2.7E-36 T 14-10-2018 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 86 101 2.7E-36 T 14-10-2018 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 156 167 2.7E-36 T 14-10-2018 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 142 152 2.7E-36 T 14-10-2018 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 41 52 2.7E-36 T 14-10-2018 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 PRINTS PR00988 Uridine kinase signature 7 24 2.7E-36 T 14-10-2018 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.0E-42 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 SUPERFAMILY SSF52540 8 204 4.87E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 Gene3D G3DSA:3.40.50.300 3 213 2.0E-61 T 14-10-2018 VV1_3025 2df2b10e0e999efd81eadd9f6aca37f5 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 1.6E-90 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 VV1_1560 5b585db78b176fddcc3a90499846dacd 206 PIRSF PIRSF016938 1 194 4.3E-31 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VV1_1560 5b585db78b176fddcc3a90499846dacd 206 SUPERFAMILY SSF89069 4 67 6.28E-21 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VV1_1560 5b585db78b176fddcc3a90499846dacd 206 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 137 189 1.9E-20 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VV1_1560 5b585db78b176fddcc3a90499846dacd 206 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 95 1.3E-34 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VV1_1560 5b585db78b176fddcc3a90499846dacd 206 Gene3D G3DSA:1.10.10.880 2 67 1.9E-23 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 Pfam PF00005 ABC transporter 368 512 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.4E-175 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 SUPERFAMILY SSF52540 350 579 1.15E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 Pfam PF00664 ABC transporter transmembrane region 25 292 1.4E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 Gene3D G3DSA:1.20.1560.10 2 333 2.4E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 SUPERFAMILY SSF90123 12 330 3.14E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 SMART SM00382 375 566 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2811 31a646fa9d1da65da36f4c99996012e8 595 Gene3D G3DSA:3.40.50.300 342 592 1.8E-67 T 14-10-2018 VV1_0132 67e9fe93bfa681893d0892f787bd0e3d 220 SUPERFAMILY SSF63848 113 218 3.79E-31 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VV1_0132 67e9fe93bfa681893d0892f787bd0e3d 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 7.5E-29 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VV1_0132 67e9fe93bfa681893d0892f787bd0e3d 220 Gene3D G3DSA:3.30.750.120 1 112 5.6E-31 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VV1_0132 67e9fe93bfa681893d0892f787bd0e3d 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.966 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VV1_0132 67e9fe93bfa681893d0892f787bd0e3d 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 7.2E-32 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VV1_0132 67e9fe93bfa681893d0892f787bd0e3d 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 2.3E-77 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VV1_0132 67e9fe93bfa681893d0892f787bd0e3d 220 Gene3D G3DSA:2.160.20.70 113 220 1.2E-31 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 Gene3D G3DSA:3.30.565.10 298 462 1.6E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 SMART SM00388 234 299 8.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 Gene3D G3DSA:1.10.287.130 204 297 8.3E-24 T 14-10-2018 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 SUPERFAMILY SSF52172 588 705 9.96E-33 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 SMART SM00387 346 461 3.7E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 SUPERFAMILY SSF47384 221 300 1.53E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 459 1.7E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 Gene3D G3DSA:3.40.50.2300 586 706 1.1E-34 T 14-10-2018 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 299 8.5E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 SUPERFAMILY SSF55874 288 459 1.18E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 Pfam PF00072 Response regulator receiver domain 591 702 2.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0931 b5f76b038b5729f3808df8c923e1b852 716 SMART SM00448 589 702 2.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1103 245553c56c09fde635eb78b4f6567f24 265 SUPERFAMILY SSF51261 111 229 1.1E-16 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1103 245553c56c09fde635eb78b4f6567f24 265 Pfam PF01551 Peptidase family M23 135 227 4.6E-11 T 14-10-2018 IPR016047 Peptidase M23 VV1_1103 245553c56c09fde635eb78b4f6567f24 265 Gene3D G3DSA:2.70.70.10 114 231 1.4E-19 T 14-10-2018 IPR011055 Duplicated hybrid motif VV2_1458 3fe7576f10ebee724394a2af48433331 360 Gene3D G3DSA:3.40.190.10 43 324 1.0E-109 T 14-10-2018 VV2_1458 3fe7576f10ebee724394a2af48433331 360 SUPERFAMILY SSF53850 40 357 6.09E-91 T 14-10-2018 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 103 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 61 82 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 161 175 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 61 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 105 118 2.9E-63 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 PIRSF PIRSF019574 5 360 8.6E-113 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV2_1458 3fe7576f10ebee724394a2af48433331 360 Pfam PF13416 Bacterial extracellular solute-binding protein 56 326 2.7E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV2_1458 3fe7576f10ebee724394a2af48433331 360 Gene3D G3DSA:3.40.190.10 146 354 1.0E-109 T 14-10-2018 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF88713 24 338 6.18E-27 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF51055 383 426 2.94E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 Gene3D G3DSA:3.20.20.370 27 332 2.1E-103 T 14-10-2018 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 SMART SM00495 381 427 5.0 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 SMART SM00495 332 378 7.7E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 Gene3D G3DSA:2.10.10.90 333 427 4.9E-34 T 14-10-2018 VV1_1481 1b730bbe14a904a68b4e94dc532ebad0 427 Pfam PF01522 Polysaccharide deacetylase 23 129 8.2E-14 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF51717 15 208 3.92E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 Pfam PF04551 GcpE protein 14 354 1.3E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.17 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 SUPERFAMILY SSF56014 265 354 2.28E-11 T 14-10-2018 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 PIRSF PIRSF004640 1 364 1.2E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 4.8E-127 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 Gene3D G3DSA:3.20.20.20 1 261 1.9E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_0427 7c0e5874638b8631bc75e221e2d4d494 372 Gene3D G3DSA:3.30.413.10 262 362 2.8E-25 T 14-10-2018 VV2_1510 2066859688a5ca04555e57539039c533 119 Pfam PF00196 Bacterial regulatory proteins, luxR family 63 116 4.5E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1510 2066859688a5ca04555e57539039c533 119 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 93 105 3.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1510 2066859688a5ca04555e57539039c533 119 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 63 77 3.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1510 2066859688a5ca04555e57539039c533 119 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 77 93 3.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1510 2066859688a5ca04555e57539039c533 119 SUPERFAMILY SSF46894 46 116 4.42E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1510 2066859688a5ca04555e57539039c533 119 Gene3D G3DSA:3.40.50.12740 1 118 8.0E-22 T 14-10-2018 VV2_1510 2066859688a5ca04555e57539039c533 119 SMART SM00421 60 117 4.4E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1510 2066859688a5ca04555e57539039c533 119 SUPERFAMILY SSF52172 1 49 3.32E-6 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1510 2066859688a5ca04555e57539039c533 119 ProSitePatterns PS00622 LuxR-type HTH domain signature. 77 104 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2270 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF55021 1 68 5.6E-6 T 14-10-2018 VV1_2270 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:3.40.50.300 192 375 6.1E-57 T 14-10-2018 VV1_2270 68115f82865cba8454887f992adcc845 514 SMART SM00382 225 368 5.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2270 68115f82865cba8454887f992adcc845 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_2270 68115f82865cba8454887f992adcc845 514 Pfam PF00158 Sigma-54 interaction domain 206 370 1.2E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_2270 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:3.30.450.20 82 186 7.1E-21 T 14-10-2018 VV1_2270 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF55785 84 174 2.27E-10 T 14-10-2018 IPR035965 PAS domain superfamily VV1_2270 68115f82865cba8454887f992adcc845 514 Pfam PF00989 PAS fold 84 132 4.2E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV1_2270 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:1.10.8.60 377 451 8.0E-16 T 14-10-2018 VV1_2270 68115f82865cba8454887f992adcc845 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 83 139 8.4E-6 T 14-10-2018 IPR000014 PAS domain VV1_2270 68115f82865cba8454887f992adcc845 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 2.7E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VV1_2270 68115f82865cba8454887f992adcc845 514 SMART SM00091 80 146 3.9E-8 T 14-10-2018 IPR000014 PAS domain VV1_2270 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF52540 205 445 3.48E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2270 68115f82865cba8454887f992adcc845 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_2270 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:3.30.70.260 1 80 8.7E-26 T 14-10-2018 VV1_2270 68115f82865cba8454887f992adcc845 514 Gene3D G3DSA:1.10.10.60 455 513 2.0E-25 T 14-10-2018 VV1_2270 68115f82865cba8454887f992adcc845 514 SUPERFAMILY SSF46689 460 512 6.57E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2270 68115f82865cba8454887f992adcc845 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV2_1546 9af187a9d1564301a1048f22348a40d5 447 Pfam PF00271 Helicase conserved C-terminal domain 240 345 8.3E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_1546 9af187a9d1564301a1048f22348a40d5 447 SMART SM00487 24 227 1.5E-50 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_1546 9af187a9d1564301a1048f22348a40d5 447 SMART SM00490 264 345 7.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_1546 9af187a9d1564301a1048f22348a40d5 447 Gene3D G3DSA:3.40.50.300 1 216 4.3E-72 T 14-10-2018 VV2_1546 9af187a9d1564301a1048f22348a40d5 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV2_1546 9af187a9d1564301a1048f22348a40d5 447 SUPERFAMILY SSF52540 77 363 1.84E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1546 9af187a9d1564301a1048f22348a40d5 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 1.6E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_1546 9af187a9d1564301a1048f22348a40d5 447 Gene3D G3DSA:3.40.50.300 218 431 3.5E-51 T 14-10-2018 VV1_0694 441a80e334bb34d8555e23d689b4d13e 148 SUPERFAMILY SSF55804 1 147 3.79E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV1_0694 441a80e334bb34d8555e23d689b4d13e 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 147 4.2E-53 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VV1_0694 441a80e334bb34d8555e23d689b4d13e 148 Gene3D G3DSA:3.40.930.10 1 148 8.3E-54 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV1_0694 441a80e334bb34d8555e23d689b4d13e 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 8.4E-39 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV1_0694 441a80e334bb34d8555e23d689b4d13e 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_0045 6f6fdbfddd97223da0c4ecc66cb5b4f9 299 TIGRFAM TIGR00688 rarD: protein RarD 7 259 5.2E-49 T 14-10-2018 IPR004626 RarD protein GO:0005887 VV2_0045 6f6fdbfddd97223da0c4ecc66cb5b4f9 299 SUPERFAMILY SSF103481 207 283 4.45E-8 T 14-10-2018 VV2_0045 6f6fdbfddd97223da0c4ecc66cb5b4f9 299 Pfam PF00892 EamA-like transporter family 7 139 2.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0045 6f6fdbfddd97223da0c4ecc66cb5b4f9 299 Pfam PF00892 EamA-like transporter family 152 283 1.2E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0045 6f6fdbfddd97223da0c4ecc66cb5b4f9 299 SUPERFAMILY SSF103481 62 140 9.29E-10 T 14-10-2018 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 5.4E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VV1_0024 d8c889cdaf42e281530e625962012a0a 432 Hamap MF_00303 Trigger factor [tig]. 1 418 21.786 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.1E-40 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.6E-142 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:3.30.70.1050 1 115 8.3E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 PIRSF PIRSF003095 1 432 1.1E-127 T 14-10-2018 IPR005215 Trigger factor GO:0015031 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF109998 248 429 3.53E-49 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VV1_0024 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF54534 90 241 8.84E-37 T 14-10-2018 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:3.10.50.40 150 246 1.9E-107 T 14-10-2018 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 5.2E-43 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 SUPERFAMILY SSF102735 1 131 4.05E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VV1_0024 d8c889cdaf42e281530e625962012a0a 432 Gene3D G3DSA:1.10.3120.10 116 417 1.9E-107 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 Gene3D G3DSA:4.10.320.10 118 164 1.4E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 SUPERFAMILY SSF47005 122 164 5.89E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 SUPERFAMILY SSF51230 2 87 7.46E-25 T 14-10-2018 IPR011053 Single hybrid motif VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 380 1.7E-54 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 Gene3D G3DSA:2.40.50.100 1 89 5.0E-23 T 14-10-2018 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 Gene3D G3DSA:3.30.559.10 165 381 7.3E-51 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 Pfam PF02817 e3 binding domain 129 161 5.7E-8 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 Pfam PF00364 Biotin-requiring enzyme 3 75 2.1E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VV2_0471 14a37cf713e4eb1b68a42f2a1f684dbf 381 SUPERFAMILY SSF52777 165 379 1.29E-55 T 14-10-2018 VV1_2748 1bc5210f583bc5e0be0f5a494c2f1da2 386 Pfam PF01966 HD domain 189 324 2.8E-16 T 14-10-2018 IPR006674 HD domain VV1_2748 1bc5210f583bc5e0be0f5a494c2f1da2 386 SUPERFAMILY SSF109604 178 365 3.14E-32 T 14-10-2018 VV1_2748 1bc5210f583bc5e0be0f5a494c2f1da2 386 Gene3D G3DSA:3.30.450.40 4 160 4.7E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_2748 1bc5210f583bc5e0be0f5a494c2f1da2 386 Gene3D G3DSA:1.10.3210.10 162 378 8.2E-60 T 14-10-2018 VV1_2748 1bc5210f583bc5e0be0f5a494c2f1da2 386 SMART SM00471 183 334 1.4E-10 T 14-10-2018 IPR003607 HD/PDEase domain VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 Pfam PF13604 AAA domain 1016 1212 1.1E-33 T 14-10-2018 VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 SUPERFAMILY SSF52540 1132 1484 3.19E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 SUPERFAMILY SSF52540 967 1155 2.77E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 Gene3D G3DSA:3.40.50.300 978 1197 7.9E-27 T 14-10-2018 VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1928 0.0 T 14-10-2018 IPR014129 Conjugative transfer relaxase protein TraI VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 SMART SM00382 1031 1285 0.0086 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 315 1.4E-119 T 14-10-2018 IPR014059 Conjugative relaxase, N-terminal VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 Pfam PF13362 Toprim domain 1763 1841 1.8E-6 T 14-10-2018 IPR006171 TOPRIM domain VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 Pfam PF08751 TrwC relaxase 11 308 8.7E-68 T 14-10-2018 IPR014862 TrwC relaxase VV2_0663 d619ba46e1da1c5f6e17956adddfc67a 1928 SUPERFAMILY SSF55464 1 325 1.92E-83 T 14-10-2018 VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 Pfam PF01327 Polypeptide deformylase 4 152 5.3E-51 T 14-10-2018 IPR023635 Peptide deformylase VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 SUPERFAMILY SSF56420 3 165 1.31E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 PIRSF PIRSF004749 1 170 1.2E-56 T 14-10-2018 IPR023635 Peptide deformylase VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 Gene3D G3DSA:3.90.45.10 1 169 1.5E-66 T 14-10-2018 IPR036821 Peptide deformylase superfamily VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.113 T 14-10-2018 IPR023635 Peptide deformylase VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 PRINTS PR01576 Peptide deformylase signature 89 100 7.8E-38 T 14-10-2018 IPR023635 Peptide deformylase VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 PRINTS PR01576 Peptide deformylase signature 33 62 7.8E-38 T 14-10-2018 IPR023635 Peptide deformylase VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 PRINTS PR01576 Peptide deformylase signature 120 149 7.8E-38 T 14-10-2018 IPR023635 Peptide deformylase VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 PRINTS PR01576 Peptide deformylase signature 101 119 7.8E-38 T 14-10-2018 IPR023635 Peptide deformylase VV1_1048 ecc4a9c675e7ce1b69163d9c49e93836 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.1E-62 T 14-10-2018 IPR023635 Peptide deformylase VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 Gene3D G3DSA:3.40.50.2300 160 326 9.0E-73 T 14-10-2018 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 Gene3D G3DSA:3.40.50.2300 63 321 9.0E-73 T 14-10-2018 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 SUPERFAMILY SSF53822 61 330 1.45E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.4E-36 T 14-10-2018 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 Gene3D G3DSA:1.10.260.40 1 59 3.2E-22 T 14-10-2018 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 SUPERFAMILY SSF47413 1 60 9.38E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 SMART SM00354 1 71 1.2E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1775 44e2d3bb7dde1f58e32aaeb0f595bbe2 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.5E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Gene3D G3DSA:3.30.470.20 191 329 3.7E-62 T 14-10-2018 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.9E-83 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 SMART SM01210 330 423 4.8E-55 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Gene3D G3DSA:3.90.600.10 330 429 8.5E-35 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 SUPERFAMILY SSF52440 1 103 3.31E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 SUPERFAMILY SSF51246 329 424 6.28E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.5E-29 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 9.0E-35 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Gene3D G3DSA:3.30.1490.20 121 190 8.9E-30 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 SMART SM01209 103 296 1.0E-143 T 14-10-2018 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 SUPERFAMILY SSF56059 104 322 4.95E-70 T 14-10-2018 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Gene3D G3DSA:3.40.50.20 2 95 3.5E-37 T 14-10-2018 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.191 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1226 b6425a96b04c2bf1de65321c3a46e9de 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 7.5E-187 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 Gene3D G3DSA:1.10.287.470 77 199 1.1E-39 T 14-10-2018 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 Gene3D G3DSA:2.40.420.20 312 321 1.1E-39 T 14-10-2018 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 Gene3D G3DSA:2.40.50.100 43 234 1.1E-39 T 14-10-2018 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 SUPERFAMILY SSF111369 38 96 7.45E-9 T 14-10-2018 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 Pfam PF13437 HlyD family secretion protein 200 272 2.0E-8 T 14-10-2018 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 SUPERFAMILY SSF111369 178 252 2.88E-6 T 14-10-2018 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 Pfam PF13533 Biotin-lipoyl like 44 88 7.2E-17 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_0994 1055bd360aab16a5f29d550746e07e99 354 SUPERFAMILY SSF111369 109 165 5.1E-5 T 14-10-2018 VV2_0994 1055bd360aab16a5f29d550746e07e99 354 Gene3D G3DSA:2.40.30.170 35 311 1.1E-39 T 14-10-2018 VV1_3171 6ab540be5aa98a8ffb5a9fc3127a56c1 263 Pfam PF12697 Alpha/beta hydrolase family 20 251 1.4E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_3171 6ab540be5aa98a8ffb5a9fc3127a56c1 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 17 258 1.8E-86 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VV1_3171 6ab540be5aa98a8ffb5a9fc3127a56c1 263 SUPERFAMILY SSF53474 13 259 5.05E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_3171 6ab540be5aa98a8ffb5a9fc3127a56c1 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 8 258 34.689 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VV1_3171 6ab540be5aa98a8ffb5a9fc3127a56c1 263 Gene3D G3DSA:3.40.50.1820 5 261 2.7E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2941 e5aa10680b4fb224ce98de39ba077ffd 269 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 15 269 32.615 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VV1_2941 e5aa10680b4fb224ce98de39ba077ffd 269 Gene3D G3DSA:3.40.50.150 8 258 4.6E-42 T 14-10-2018 VV1_2941 e5aa10680b4fb224ce98de39ba077ffd 269 Pfam PF08241 Methyltransferase domain 59 152 1.1E-26 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VV1_2941 e5aa10680b4fb224ce98de39ba077ffd 269 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 23 268 2.8E-68 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VV1_2941 e5aa10680b4fb224ce98de39ba077ffd 269 SUPERFAMILY SSF53335 21 200 1.26E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.9E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.9E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.9E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.9E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.9E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 472 66.715 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 SUPERFAMILY SSF53335 6 308 1.72E-61 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 467 5.9E-11 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 6.3E-100 T 14-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 3.7E-29 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 Gene3D G3DSA:2.30.130.90 309 472 6.5E-66 T 14-10-2018 VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 Gene3D G3DSA:3.40.50.150 2 308 2.3E-97 T 14-10-2018 VV1_2649 328a75c0d3650db3d23a532a08c11fbf 472 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 4.4E-48 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 Gene3D G3DSA:1.25.40.10 147 255 6.3E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 Gene3D G3DSA:1.25.40.10 33 146 2.7E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 SUPERFAMILY SSF48452 72 247 3.34E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 Pfam PF13181 Tetratricopeptide repeat 149 180 0.0083 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 SMART SM00028 149 182 0.37 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 SMART SM00028 292 322 94.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 SMART SM00028 72 105 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 SMART SM00028 358 391 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 SUPERFAMILY SSF48452 213 386 3.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0848 109106aa5f1b1ce427a5f005aaee068b 405 Gene3D G3DSA:1.25.40.10 269 390 3.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1318 101ffcd0e174d76b534cd0ba03c09284 565 Pfam PF00849 RNA pseudouridylate synthase 371 518 8.6E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV2_1318 101ffcd0e174d76b534cd0ba03c09284 565 SUPERFAMILY SSF55120 355 562 3.68E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV2_1318 101ffcd0e174d76b534cd0ba03c09284 565 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 409 423 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV2_1318 101ffcd0e174d76b534cd0ba03c09284 565 Gene3D G3DSA:3.30.2350.10 353 564 1.6E-62 T 14-10-2018 VV1_3092 174c21b38537a3ff1feab63c46606977 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 2.6E-20 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VV1_3092 174c21b38537a3ff1feab63c46606977 676 Gene3D G3DSA:4.10.860.10 631 676 1.8E-19 T 14-10-2018 VV1_3092 174c21b38537a3ff1feab63c46606977 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VV1_3092 174c21b38537a3ff1feab63c46606977 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 138 1.2E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV1_3092 174c21b38537a3ff1feab63c46606977 676 Gene3D G3DSA:3.40.50.300 416 597 9.7E-50 T 14-10-2018 VV1_3092 174c21b38537a3ff1feab63c46606977 676 Pfam PF02151 UvrB/uvrC motif 636 671 4.0E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 VV1_3092 174c21b38537a3ff1feab63c46606977 676 Gene3D G3DSA:3.40.50.300 265 415 1.0E-51 T 14-10-2018 VV1_3092 174c21b38537a3ff1feab63c46606977 676 SUPERFAMILY SSF52540 37 584 4.51E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3092 174c21b38537a3ff1feab63c46606977 676 SMART SM00487 9 426 1.8E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_3092 174c21b38537a3ff1feab63c46606977 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.156 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VV1_3092 174c21b38537a3ff1feab63c46606977 676 SUPERFAMILY SSF46600 629 672 4.84E-11 T 14-10-2018 IPR036876 UVR domain superfamily VV1_3092 174c21b38537a3ff1feab63c46606977 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 1.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_3092 174c21b38537a3ff1feab63c46606977 676 Gene3D G3DSA:3.40.50.300 1 233 9.3E-73 T 14-10-2018 VV1_3092 174c21b38537a3ff1feab63c46606977 676 SMART SM00490 461 547 1.3E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_3092 174c21b38537a3ff1feab63c46606977 676 SUPERFAMILY SSF52540 4 416 1.27E-138 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3212 92cce70f4258eab0745390c9a9cbc259 551 SUPERFAMILY SSF48230 110 289 2.47E-12 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV1_3212 92cce70f4258eab0745390c9a9cbc259 551 Gene3D G3DSA:1.50.10.100 34 307 3.6E-39 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV1_3212 92cce70f4258eab0745390c9a9cbc259 551 Gene3D G3DSA:2.70.98.70 320 547 4.8E-21 T 14-10-2018 VV1_3212 92cce70f4258eab0745390c9a9cbc259 551 Pfam PF16889 Heparinase II/III N-terminus 146 290 3.3E-12 T 14-10-2018 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 VV1_3212 92cce70f4258eab0745390c9a9cbc259 551 Pfam PF07940 Heparinase II/III-like protein 319 536 8.0E-46 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 VV2_0777 969ae34c697ce83cde84aba44fd873fd 221 SUPERFAMILY SSF50475 2 184 8.84E-52 T 14-10-2018 VV2_0777 969ae34c697ce83cde84aba44fd873fd 221 Gene3D G3DSA:2.30.110.10 2 219 7.9E-59 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VV2_0777 969ae34c697ce83cde84aba44fd873fd 221 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 20 162 2.8E-39 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related VV2_1240 bd47cd53336a4647429e563684adb38d 149 Gene3D G3DSA:2.60.40.1890 29 144 2.9E-39 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VV2_1240 bd47cd53336a4647429e563684adb38d 149 Pfam PF04314 Copper chaperone PCu(A)C 26 132 2.9E-37 T 14-10-2018 IPR007410 Copper chaperone PCuAC VV2_1240 bd47cd53336a4647429e563684adb38d 149 SUPERFAMILY SSF110087 3 141 6.54E-46 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily VV1_1404 b635db39b4ad81d4d027426f1df0b608 258 SUPERFAMILY SSF52402 26 213 1.76E-55 T 14-10-2018 VV1_1404 b635db39b4ad81d4d027426f1df0b608 258 Gene3D G3DSA:3.40.50.620 7 221 6.1E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1404 b635db39b4ad81d4d027426f1df0b608 258 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 2.6E-85 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VV1_1404 b635db39b4ad81d4d027426f1df0b608 258 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 38.992 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VV1_1404 b635db39b4ad81d4d027426f1df0b608 258 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 224 3.0E-50 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VV1_1404 b635db39b4ad81d4d027426f1df0b608 258 PIRSF PIRSF000857 4 253 2.8E-57 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VV1_1404 b635db39b4ad81d4d027426f1df0b608 258 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 3.1E-91 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.6E-39 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.40.50.720 109 297 4.6E-112 T 14-10-2018 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF55021 335 408 8.02E-18 T 14-10-2018 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.40.50.720 14 312 4.6E-112 T 14-10-2018 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF52283 7 136 9.99E-50 T 14-10-2018 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.3E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 Gene3D G3DSA:3.30.70.260 328 408 2.6E-33 T 14-10-2018 VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 SUPERFAMILY SSF51735 108 295 7.9E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1546 582aa16b47be6f939fdf0a9ef59f3c7b 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 5.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 5.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 5.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 Gene3D G3DSA:3.40.50.2300 4 138 1.9E-28 T 14-10-2018 VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 SUPERFAMILY SSF46894 146 208 2.52E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 Gene3D G3DSA:1.10.10.10 141 210 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 1.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1570 84510b7c707e175cbe8c9816a5cd7946 210 SMART SM00421 149 206 9.4E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 SMART SM00028 225 258 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 SMART SM00028 325 358 340.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 SMART SM00028 191 224 24.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 SMART SM00028 291 324 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 SUPERFAMILY SSF48452 191 353 2.78E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 Pfam PF14559 Tetratricopeptide repeat 201 256 1.8E-5 T 14-10-2018 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 Gene3D G3DSA:1.25.40.10 281 379 7.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1438 18332ea22c0d2dc7672c54bb02531e44 379 Gene3D G3DSA:1.25.40.10 195 280 2.7E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1617 f1a44b2c3ae9a6cb40894386c644dc67 249 Gene3D G3DSA:3.40.1280.10 1 160 2.8E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_1617 f1a44b2c3ae9a6cb40894386c644dc67 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 119.721 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV1_1617 f1a44b2c3ae9a6cb40894386c644dc67 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.6E-71 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV1_1617 f1a44b2c3ae9a6cb40894386c644dc67 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.4E-110 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV1_1617 f1a44b2c3ae9a6cb40894386c644dc67 249 PIRSF PIRSF000386 1 249 1.7E-102 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV1_1617 f1a44b2c3ae9a6cb40894386c644dc67 249 Gene3D G3DSA:1.10.1270.20 161 249 2.3E-36 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VV1_1617 f1a44b2c3ae9a6cb40894386c644dc67 249 SUPERFAMILY SSF75217 1 246 1.77E-103 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_1636 b7a2ac14d2fbba49cfc52206027d0e54 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.2E-72 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 VV1_1636 b7a2ac14d2fbba49cfc52206027d0e54 176 Gene3D G3DSA:3.40.50.2020 1 176 1.0E-64 T 14-10-2018 VV1_1636 b7a2ac14d2fbba49cfc52206027d0e54 176 Pfam PF00156 Phosphoribosyl transferase domain 14 159 4.5E-26 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV1_1636 b7a2ac14d2fbba49cfc52206027d0e54 176 SUPERFAMILY SSF53271 3 175 1.31E-54 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV1_0209 9f8a0645d99cd3669f7abfae65c9f8b3 300 SUPERFAMILY SSF53686 4 287 5.5E-89 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV1_0209 9f8a0645d99cd3669f7abfae65c9f8b3 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 3 289 1.7E-128 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VV1_0209 9f8a0645d99cd3669f7abfae65c9f8b3 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 4 277 1.1E-61 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VV1_0209 9f8a0645d99cd3669f7abfae65c9f8b3 300 Gene3D G3DSA:3.40.50.1100 21 123 3.3E-119 T 14-10-2018 VV1_0209 9f8a0645d99cd3669f7abfae65c9f8b3 300 Gene3D G3DSA:3.40.50.1100 3 284 3.3E-119 T 14-10-2018 VV1_0209 9f8a0645d99cd3669f7abfae65c9f8b3 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 9 27 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VV1_0209 9f8a0645d99cd3669f7abfae65c9f8b3 300 TIGRFAM TIGR01139 cysK: cysteine synthase A 3 289 1.6E-135 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VV1_0677 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 2 20 9.5E-12 T 14-10-2018 IPR006015 Universal stress protein A VV1_0677 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 102 114 9.5E-12 T 14-10-2018 IPR006015 Universal stress protein A VV1_0677 c458952e90dc4cd0483e38fa427438a0 145 PRINTS PR01438 Universal stress protein signature 120 142 9.5E-12 T 14-10-2018 IPR006015 Universal stress protein A VV1_0677 c458952e90dc4cd0483e38fa427438a0 145 Gene3D G3DSA:3.40.50.620 1 142 1.5E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0677 c458952e90dc4cd0483e38fa427438a0 145 PIRSF PIRSF006276 1 145 6.8E-21 T 14-10-2018 IPR006015 Universal stress protein A VV1_0677 c458952e90dc4cd0483e38fa427438a0 145 Pfam PF00582 Universal stress protein family 1 142 1.1E-32 T 14-10-2018 IPR006016 UspA VV1_0677 c458952e90dc4cd0483e38fa427438a0 145 SUPERFAMILY SSF52402 2 144 2.85E-36 T 14-10-2018 VV1_2031 08a619322b93750e992e34053281829a 496 Gene3D G3DSA:3.40.50.150 138 452 4.0E-82 T 14-10-2018 VV1_2031 08a619322b93750e992e34053281829a 496 SUPERFAMILY SSF53335 3 480 1.28E-122 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2031 08a619322b93750e992e34053281829a 496 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_2031 08a619322b93750e992e34053281829a 496 Pfam PF02384 N-6 DNA Methylase 140 452 4.4E-93 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VV1_2031 08a619322b93750e992e34053281829a 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 2.8E-19 T 14-10-2018 VV1_2031 08a619322b93750e992e34053281829a 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 267 279 2.8E-19 T 14-10-2018 VV1_2031 08a619322b93750e992e34053281829a 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 320 2.8E-19 T 14-10-2018 VV1_2031 08a619322b93750e992e34053281829a 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 162 178 2.8E-19 T 14-10-2018 VV1_2031 08a619322b93750e992e34053281829a 496 Pfam PF12161 HsdM N-terminal domain 4 130 1.3E-15 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VV1_2031 08a619322b93750e992e34053281829a 496 Gene3D G3DSA:1.20.1260.30 1 136 1.4E-47 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VV1_0277 0ec8173a953cb3ea82e5380600f372c5 156 PIRSF PIRSF004505 1 155 2.2E-43 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VV1_0277 0ec8173a953cb3ea82e5380600f372c5 156 SUPERFAMILY SSF75217 1 154 2.09E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_0277 0ec8173a953cb3ea82e5380600f372c5 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.0E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VV1_0277 0ec8173a953cb3ea82e5380600f372c5 156 Gene3D G3DSA:3.40.1280.10 1 156 8.3E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_0277 0ec8173a953cb3ea82e5380600f372c5 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.2E-78 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VV1_0277 0ec8173a953cb3ea82e5380600f372c5 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.66 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VV2_0141 992e3042413ab3a92419380ec61b7968 630 Gene3D G3DSA:3.20.20.450 376 628 1.1E-97 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0141 992e3042413ab3a92419380ec61b7968 630 Gene3D G3DSA:3.30.450.40 12 162 2.5E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_0141 992e3042413ab3a92419380ec61b7968 630 SMART SM00267 192 362 1.2E-23 T 14-10-2018 IPR000160 GGDEF domain VV2_0141 992e3042413ab3a92419380ec61b7968 630 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 356 4.5E-28 T 14-10-2018 IPR000160 GGDEF domain VV2_0141 992e3042413ab3a92419380ec61b7968 630 SUPERFAMILY SSF55073 208 356 1.57E-27 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0141 992e3042413ab3a92419380ec61b7968 630 SMART SM00052 372 619 1.0E-116 T 14-10-2018 IPR001633 EAL domain VV2_0141 992e3042413ab3a92419380ec61b7968 630 SUPERFAMILY SSF141868 377 626 4.58E-87 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0141 992e3042413ab3a92419380ec61b7968 630 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 204 358 1.5E-17 T 14-10-2018 IPR000160 GGDEF domain VV2_0141 992e3042413ab3a92419380ec61b7968 630 Gene3D G3DSA:3.30.70.270 197 375 1.4E-33 T 14-10-2018 VV2_0141 992e3042413ab3a92419380ec61b7968 630 Pfam PF01590 GAF domain 20 144 2.2E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_0141 992e3042413ab3a92419380ec61b7968 630 SUPERFAMILY SSF55781 19 164 7.52E-21 T 14-10-2018 VV2_0141 992e3042413ab3a92419380ec61b7968 630 Pfam PF00563 EAL domain 379 613 1.3E-74 T 14-10-2018 IPR001633 EAL domain VV2_0141 992e3042413ab3a92419380ec61b7968 630 SMART SM00065 14 161 6.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV1_0258 4310069db47ea0495ebd201acc339cad 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VV1_0258 4310069db47ea0495ebd201acc339cad 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 6.0E-68 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV1_0258 4310069db47ea0495ebd201acc339cad 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.571 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV1_0258 4310069db47ea0495ebd201acc339cad 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VV1_0258 4310069db47ea0495ebd201acc339cad 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 7.1E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VV1_0258 4310069db47ea0495ebd201acc339cad 196 SUPERFAMILY SSF53178 5 194 2.88E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VV1_0258 4310069db47ea0495ebd201acc339cad 196 Gene3D G3DSA:3.40.50.1470 1 196 3.1E-75 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 1.8E-35 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 SMART SM00028 217 250 0.0034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 SMART SM00028 181 214 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 Pfam PF13432 Tetratricopeptide repeat 155 207 8.9E-9 T 14-10-2018 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 Gene3D G3DSA:1.20.5.110 46 120 4.5E-22 T 14-10-2018 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 Pfam PF07719 Tetratricopeptide repeat 217 249 1.2E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 Gene3D G3DSA:1.25.40.10 143 260 4.6E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 SUPERFAMILY SSF48452 143 256 4.38E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 Pfam PF16331 TolA binding protein trimerisation 50 121 4.5E-25 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VV1_2172 6b071fa0a779e81349f4e0fff10bcd28 260 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 260 17.088 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Pfam PF13426 PAS domain 306 408 0.045 T 14-10-2018 IPR000014 PAS domain VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SUPERFAMILY SSF58104 473 754 3.66E-75 T 14-10-2018 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SUPERFAMILY SSF55785 153 212 1.08E-5 T 14-10-2018 IPR035965 PAS domain superfamily VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Gene3D G3DSA:3.30.450.20 163 283 8.1E-34 T 14-10-2018 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Gene3D G3DSA:3.30.450.20 289 408 2.6E-33 T 14-10-2018 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Gene3D G3DSA:3.30.450.20 36 157 8.5E-31 T 14-10-2018 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Pfam PF13188 PAS domain 165 216 0.0099 T 14-10-2018 IPR000014 PAS domain VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Pfam PF13188 PAS domain 40 94 0.0046 T 14-10-2018 IPR000014 PAS domain VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Gene3D G3DSA:1.10.287.950 452 754 3.7E-89 T 14-10-2018 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 565 721 7.3E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SMART SM00091 165 232 2.6 T 14-10-2018 IPR000014 PAS domain VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SMART SM00091 38 101 12.0 T 14-10-2018 IPR000014 PAS domain VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SMART SM00091 292 361 6.7 T 14-10-2018 IPR000014 PAS domain VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 527 556 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 604 631 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 681 710 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 633 662 1.6E-52 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SMART SM00283 506 753 1.9E-97 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SMART SM00304 453 505 8.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1165 a3a58d935e142ef83ccb19ef3800c3f4 807 SMART SM00304 506 558 74.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 Pfam PF00072 Response regulator receiver domain 4 116 5.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 SMART SM00421 146 203 9.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 SMART SM00448 2 115 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 SUPERFAMILY SSF52172 2 132 1.34E-33 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 Gene3D G3DSA:3.40.50.12740 2 209 2.7E-59 T 14-10-2018 VV1_3054 6d0cf1cad48e6983153a245be3675d7f 214 SUPERFAMILY SSF46894 136 210 2.41E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 PIRSF PIRSF001259 3 369 2.8E-130 T 14-10-2018 VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 Gene3D G3DSA:3.90.870.10 1 206 2.0E-89 T 14-10-2018 VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 Pfam PF00925 GTP cyclohydrolase II 207 367 7.1E-40 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.88 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 SUPERFAMILY SSF55821 3 202 2.17E-87 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 6.4E-76 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.5E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0321 96c5b79b87d6737991d99404d62d90b1 369 SUPERFAMILY SSF142695 205 367 2.22E-48 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.90.480.20 554 639 3.0E-5 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 1.2E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 3.1E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 773 3.2E-13 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.9E-15 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.9E-15 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.9E-15 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.9E-15 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 6.9E-15 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF51905 3 187 1.71E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF56014 634 809 1.57E-45 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 623 2.9E-11 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.30.413.10 640 745 5.9E-22 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.50.50.60 110 246 1.1E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF55124 503 629 3.11E-31 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 SUPERFAMILY SSF51905 144 311 2.35E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 7.2E-11 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 7.2E-11 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 7.2E-11 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 7.2E-11 T 14-10-2018 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 PIRSF PIRSF037149 1 836 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:3.50.50.60 7 283 1.1E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0370 dbb060c2209776ff84ba3fd0d14e62bb 853 Gene3D G3DSA:1.10.10.1100 424 478 3.1E-12 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:1.10.287.130 642 733 5.1E-21 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SMART SM00448 1006 1119 7.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 785 890 5.3E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SUPERFAMILY SSF52172 1007 1150 7.54E-29 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:1.20.120.160 1145 1247 7.8E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:3.40.50.2300 985 1124 7.2E-30 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SUPERFAMILY SSF47226 1102 1222 1.83E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SMART SM00387 782 893 8.2E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:3.40.190.10 78 240 1.3E-17 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SUPERFAMILY SSF55874 724 895 1.31E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Pfam PF00072 Response regulator receiver domain 1008 1119 4.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SUPERFAMILY SSF53850 272 489 1.41E-14 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:3.30.565.10 736 897 4.4E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:3.40.190.10 277 483 1.3E-16 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SUPERFAMILY SSF47384 656 736 4.12E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 86 241 3.3E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:3.40.190.10 128 218 1.3E-17 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Gene3D G3DSA:3.40.190.10 358 448 1.3E-16 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 285 486 7.4E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SMART SM00388 670 735 7.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Pfam PF01627 Hpt domain 1156 1241 1.5E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 SUPERFAMILY SSF53850 79 242 7.17E-20 T 14-10-2018 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 890 7.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 832 7.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 871 7.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 PRINTS PR00344 Bacterial sensor protein C-terminal signature 836 846 7.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3202 5ae644f1016a5ab9eb9493edf106fc68 1254 Pfam PF00512 His Kinase A (phospho-acceptor) domain 671 734 3.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF00158 Sigma-54 interaction domain 136 303 1.7E-73 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:1.10.10.60 391 485 9.9E-13 T 14-10-2018 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF46689 348 485 3.44E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF02954 Bacterial regulatory protein, Fis family 443 483 2.4E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF52172 6 178 2.57E-5 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:1.10.8.60 308 384 2.9E-25 T 14-10-2018 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 SUPERFAMILY SSF52540 136 377 7.29E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 2.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 2.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:3.40.50.2300 1 116 8.0E-11 T 14-10-2018 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 Gene3D G3DSA:3.40.50.300 124 307 1.9E-67 T 14-10-2018 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 SMART SM00382 156 300 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 4.0E-29 T 14-10-2018 IPR010518 Flagellar regulatory FleQ VV1_1931 d0b6675b9eb387d7bd8ec0b1354ad371 487 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 Gene3D G3DSA:3.30.230.10 291 533 2.4E-91 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 Pfam PF13654 AAA domain 106 288 4.9E-20 T 14-10-2018 VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 506 2.8E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 SUPERFAMILY SSF54211 314 506 1.02E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 Gene3D G3DSA:3.40.50.300 98 196 3.5E-6 T 14-10-2018 VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.2E-10 T 14-10-2018 VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.2E-10 T 14-10-2018 VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.2E-10 T 14-10-2018 VV1_2628 75c77b4b397fe92964f7914fd695a0e7 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.2E-10 T 14-10-2018 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF07085 DRTGG domain 233 344 1.3E-27 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF75138 229 353 4.58E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.1390.20 225 365 2.3E-13 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 7.7E-132 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 PIRSF PIRSF006107 1 714 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.50.10950 398 709 6.6E-134 T 14-10-2018 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF13500 AAA domain 3 229 7.7E-50 T 14-10-2018 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF52540 1 240 1.93E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.50.300 5 219 2.2E-12 T 14-10-2018 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 SUPERFAMILY SSF53659 392 709 3.08E-96 T 14-10-2018 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 Gene3D G3DSA:3.40.50.10750 529 682 6.6E-134 T 14-10-2018 VV1_2220 5e50bca2c2ad87947a01a0daf2011bc7 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 6.9E-125 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VV2_0189 ad3e280afcc330d07b0ffc9591688e2f 207 Pfam PF07883 Cupin domain 146 204 1.6E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VV2_0189 ad3e280afcc330d07b0ffc9591688e2f 207 Gene3D G3DSA:1.10.260.40 22 96 1.0E-15 T 14-10-2018 VV2_0189 ad3e280afcc330d07b0ffc9591688e2f 207 SUPERFAMILY SSF51182 97 204 1.06E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_0189 ad3e280afcc330d07b0ffc9591688e2f 207 Pfam PF01381 Helix-turn-helix 32 84 5.7E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV2_0189 ad3e280afcc330d07b0ffc9591688e2f 207 SUPERFAMILY SSF47413 26 90 2.95E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_0189 ad3e280afcc330d07b0ffc9591688e2f 207 SMART SM00530 31 86 4.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV2_0189 ad3e280afcc330d07b0ffc9591688e2f 207 Gene3D G3DSA:2.60.120.10 97 205 6.2E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_1274 acf385d52eec5fcaf1dcca33d88fd792 401 Pfam PF01609 Transposase DDE domain 88 312 2.5E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV1_1274 acf385d52eec5fcaf1dcca33d88fd792 401 SUPERFAMILY SSF53098 60 317 1.67E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_1274 acf385d52eec5fcaf1dcca33d88fd792 401 Pfam PF13006 Insertion element 4 transposase N-terminal 2 69 1.3E-20 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 3.5E-9 T 14-10-2018 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 8.7E-210 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.0E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Gene3D G3DSA:1.10.150.20 555 610 2.3E-24 T 14-10-2018 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 SUPERFAMILY SSF82771 16 100 3.27E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 SMART SM00278 588 607 340.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 SMART SM00278 556 575 0.24 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 542 4.1E-42 T 14-10-2018 IPR001162 UvrC family homology region VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Gene3D G3DSA:3.40.1440.10 7 102 3.7E-31 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 SMART SM00465 17 98 1.1E-22 T 14-10-2018 IPR000305 GIY-YIG endonuclease VV1_3053 7fa10907da3fade89b36772284a8bd66 610 SUPERFAMILY SSF47781 521 609 2.67E-19 T 14-10-2018 IPR010994 RuvA domain 2-like VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.183 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VV1_3053 7fa10907da3fade89b36772284a8bd66 610 SUPERFAMILY SSF46600 190 243 1.23E-12 T 14-10-2018 IPR036876 UVR domain superfamily VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Gene3D G3DSA:3.30.420.340 380 552 4.5E-44 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily VV1_3053 7fa10907da3fade89b36772284a8bd66 610 Pfam PF02151 UvrB/uvrC motif 205 238 3.8E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 Gene3D G3DSA:3.40.50.720 8 285 2.1E-114 T 14-10-2018 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 205 221 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 264 1.2E-34 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 291 1.4E-22 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 Pfam PF11890 Domain of unknown function (DUF3410) 297 377 1.2E-28 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 Gene3D G3DSA:3.30.1370.170 301 384 7.4E-34 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 SUPERFAMILY SSF52283 8 116 4.46E-23 T 14-10-2018 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 8 365 46.169 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 Gene3D G3DSA:3.40.50.720 100 265 2.1E-114 T 14-10-2018 VV1_1988 e00df2237f3d64c1ebafe99bdcf5caf2 384 SUPERFAMILY SSF51735 100 264 7.09E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2503 cacd5e06f54d0c3eff726a800b4e9c5d 244 Pfam PF04280 Tim44-like domain 89 215 7.0E-8 T 14-10-2018 IPR007379 Tim44-like domain VV1_2503 cacd5e06f54d0c3eff726a800b4e9c5d 244 SMART SM00978 69 217 4.3E-20 T 14-10-2018 IPR007379 Tim44-like domain VV1_2503 cacd5e06f54d0c3eff726a800b4e9c5d 244 SUPERFAMILY SSF54427 87 216 6.57E-7 T 14-10-2018 IPR032710 NTF2-like domain superfamily VV1_2503 cacd5e06f54d0c3eff726a800b4e9c5d 244 Gene3D G3DSA:3.10.450.240 54 219 5.8E-6 T 14-10-2018 VV2_0254 425db95058e045151dcd07e91b8de2ce 563 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 6.2E-39 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VV2_0254 425db95058e045151dcd07e91b8de2ce 563 SUPERFAMILY SSF53850 120 557 8.32E-57 T 14-10-2018 VV2_0254 425db95058e045151dcd07e91b8de2ce 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 2.7E-20 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV2_0254 425db95058e045151dcd07e91b8de2ce 563 Gene3D G3DSA:3.40.190.10 122 312 1.2E-36 T 14-10-2018 VV1_0824 4576903cd7f4107f8bdee5f1cc5fa10a 78 Pfam PF00830 Ribosomal L28 family 3 62 1.1E-25 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0824 4576903cd7f4107f8bdee5f1cc5fa10a 78 SUPERFAMILY SSF143800 2 76 1.35E-29 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0824 4576903cd7f4107f8bdee5f1cc5fa10a 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.6E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0824 4576903cd7f4107f8bdee5f1cc5fa10a 78 Gene3D G3DSA:2.30.170.40 2 78 2.0E-32 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0824 4576903cd7f4107f8bdee5f1cc5fa10a 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.065 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 PIRSF PIRSF002764 2 225 1.1E-83 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 58 75 1.9E-69 T 14-10-2018 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 32 53 1.9E-69 T 14-10-2018 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 198 221 1.9E-69 T 14-10-2018 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 81 104 1.9E-69 T 14-10-2018 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 161 180 1.9E-69 T 14-10-2018 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 106 124 1.9E-69 T 14-10-2018 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 Pfam PF03379 CcmB protein 8 222 4.7E-90 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1962 306cbd7ce8b34223296c379737a15ed1 225 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 11 221 6.3E-92 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VV1_1740 4dea0146c9d940f28ce0764c27703819 307 Gene3D G3DSA:3.40.190.10 103 286 4.0E-44 T 14-10-2018 VV1_1740 4dea0146c9d940f28ce0764c27703819 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1740 4dea0146c9d940f28ce0764c27703819 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1740 4dea0146c9d940f28ce0764c27703819 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1740 4dea0146c9d940f28ce0764c27703819 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1740 4dea0146c9d940f28ce0764c27703819 307 Pfam PF03466 LysR substrate binding domain 94 287 4.0E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1740 4dea0146c9d940f28ce0764c27703819 307 SUPERFAMILY SSF53850 95 292 1.1E-26 T 14-10-2018 VV1_1740 4dea0146c9d940f28ce0764c27703819 307 Gene3D G3DSA:1.10.10.10 7 95 4.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1740 4dea0146c9d940f28ce0764c27703819 307 SUPERFAMILY SSF46785 4 87 5.9E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1740 4dea0146c9d940f28ce0764c27703819 307 Gene3D G3DSA:3.40.190.10 163 259 4.0E-44 T 14-10-2018 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 Gene3D G3DSA:3.80.30.20 145 377 1.4E-82 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.1E-152 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 6.3E-198 T 14-10-2018 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.721 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 Gene3D G3DSA:3.40.50.12160 3 138 1.8E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 Pfam PF01938 TRAM domain 379 440 4.8E-18 T 14-10-2018 IPR002792 TRAM domain VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 SUPERFAMILY SSF102114 123 374 1.09E-61 T 14-10-2018 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 Pfam PF04055 Radical SAM superfamily 151 325 1.7E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_0266 1a7097b54144cc22436a3ee29a2c2db0 474 SMART SM00729 147 367 1.7E-64 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV1_0372 9d62803dc9dc95313fb5bb51b83f2be8 452 Gene3D G3DSA:3.30.160.390 8 107 4.7E-18 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VV1_0372 9d62803dc9dc95313fb5bb51b83f2be8 452 Gene3D G3DSA:1.10.443.10 251 432 3.3E-14 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_0372 9d62803dc9dc95313fb5bb51b83f2be8 452 SUPERFAMILY SSF56349 162 430 3.83E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_0372 9d62803dc9dc95313fb5bb51b83f2be8 452 Pfam PF13356 Arm DNA-binding domain 23 97 2.4E-12 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VV1_0372 9d62803dc9dc95313fb5bb51b83f2be8 452 Pfam PF00589 Phage integrase family 251 419 2.3E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV2_0730 6876c5cf40718468b06850e930a26110 299 SMART SM01130 4 295 6.9E-66 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV2_0730 6876c5cf40718468b06850e930a26110 299 Gene3D G3DSA:3.20.20.70 2 299 3.0E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0730 6876c5cf40718468b06850e930a26110 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 2.5E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV2_0730 6876c5cf40718468b06850e930a26110 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.5E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV2_0730 6876c5cf40718468b06850e930a26110 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.5E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV2_0730 6876c5cf40718468b06850e930a26110 299 SUPERFAMILY SSF51569 1 297 3.45E-72 T 14-10-2018 VV2_0730 6876c5cf40718468b06850e930a26110 299 Pfam PF00701 Dihydrodipicolinate synthetase family 4 291 5.7E-48 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV2_0730 6876c5cf40718468b06850e930a26110 299 PIRSF PIRSF001365 1 299 1.2E-67 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_0562 f1801618b33d94ff143ea1134b44ddc5 281 Gene3D G3DSA:3.40.190.10 92 264 1.4E-6 T 14-10-2018 VV1_0562 f1801618b33d94ff143ea1134b44ddc5 281 Pfam PF03466 LysR substrate binding domain 90 276 9.7E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0562 f1801618b33d94ff143ea1134b44ddc5 281 SUPERFAMILY SSF53850 90 279 9.59E-18 T 14-10-2018 VV1_0562 f1801618b33d94ff143ea1134b44ddc5 281 Gene3D G3DSA:3.40.190.10 161 251 1.4E-6 T 14-10-2018 VV1_0562 f1801618b33d94ff143ea1134b44ddc5 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.1E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0562 f1801618b33d94ff143ea1134b44ddc5 281 Gene3D G3DSA:1.10.10.10 2 87 5.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0562 f1801618b33d94ff143ea1134b44ddc5 281 SUPERFAMILY SSF46785 3 77 2.72E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0353 bade42debf9c7c67ad26f495b69f7f94 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 1 19 8.1E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0353 bade42debf9c7c67ad26f495b69f7f94 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 21 2.1E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0353 bade42debf9c7c67ad26f495b69f7f94 128 SUPERFAMILY SSF54523 1 103 1.2E-17 T 14-10-2018 VV1_0353 bade42debf9c7c67ad26f495b69f7f94 128 Gene3D G3DSA:3.30.700.10 2 128 2.0E-20 T 14-10-2018 VV1_0353 bade42debf9c7c67ad26f495b69f7f94 128 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 22 106 3.1E-17 T 14-10-2018 IPR031982 Type IV minor pilin ComP VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 SUPERFAMILY SSF46894 129 192 8.16E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 SUPERFAMILY SSF52172 5 131 8.54E-20 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 SMART SM00421 136 193 5.8E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 Pfam PF00072 Response regulator receiver domain 6 117 5.8E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 SMART SM00448 4 117 2.2E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 7.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 7.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 7.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 Gene3D G3DSA:1.10.10.10 129 194 2.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 Gene3D G3DSA:3.40.50.2300 1 128 2.6E-18 T 14-10-2018 VV2_1508 9b3f870f198a495db89f8f831f481f0d 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 190 1.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2277 40b7c29dad1b6d63c267217c2882d136 439 SMART SM00267 279 438 1.4E-46 T 14-10-2018 IPR000160 GGDEF domain VV1_2277 40b7c29dad1b6d63c267217c2882d136 439 Gene3D G3DSA:3.30.70.270 276 437 1.1E-47 T 14-10-2018 VV1_2277 40b7c29dad1b6d63c267217c2882d136 439 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 287 436 7.0E-40 T 14-10-2018 IPR000160 GGDEF domain VV1_2277 40b7c29dad1b6d63c267217c2882d136 439 SUPERFAMILY SSF55073 295 436 7.14E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2277 40b7c29dad1b6d63c267217c2882d136 439 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 434 1.7E-36 T 14-10-2018 IPR000160 GGDEF domain VV2_0970 04cadb69b612654f91fe3210e44ae557 278 Gene3D G3DSA:3.40.50.1820 1 264 8.5E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0970 04cadb69b612654f91fe3210e44ae557 278 Pfam PF12697 Alpha/beta hydrolase family 42 258 8.2E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV2_0970 04cadb69b612654f91fe3210e44ae557 278 SUPERFAMILY SSF53474 4 261 1.56E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Gene3D G3DSA:2.60.120.260 1463 1602 3.0E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Gene3D G3DSA:1.20.58.1190 2376 2466 2.2E-24 T 14-10-2018 VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 SUPERFAMILY SSF158842 3580 3853 6.02E-107 T 14-10-2018 VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Gene3D G3DSA:3.40.50.11550 3830 4080 1.6E-97 T 14-10-2018 VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 SUPERFAMILY SSF53474 2993 3108 1.89E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Gene3D G3DSA:3.40.50.1820 2939 3153 3.4E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF11647 Membrane Localization Domain 3594 3657 1.7E-22 T 14-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF11647 Membrane Localization Domain 2380 2449 2.6E-26 T 14-10-2018 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Gene3D G3DSA:2.160.20.160 4801 5083 1.6E-18 T 14-10-2018 VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 SUPERFAMILY SSF51120 4928 5133 1.31E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF12146 Serine aminopeptidase, S33 2997 3111 8.2E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 SUPERFAMILY SSF51120 4843 4938 1.57E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF11713 Peptidase C80 family 4119 4275 4.5E-53 T 14-10-2018 IPR020974 CGT/MARTX, cysteine protease (CPD) domain VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Gene3D G3DSA:1.20.140.180 3587 3727 1.7E-60 T 14-10-2018 VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 SUPERFAMILY SSF159501 3856 4077 2.98E-75 T 14-10-2018 VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 759 769 5.0 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 141 157 0.017 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 741 754 0.16 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1163 1179 0.045 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1031 1043 0.43 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 915 932 0.71 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 275 288 0.6 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 782 798 0.19 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 839 855 0.23 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1067 1079 6.0 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1087 1102 0.28 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1258 1275 2.2 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1184 1199 0.017 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 801 816 0.056 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 820 835 0.089 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1201 1217 0.0036 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 858 875 0.53 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 207 224 0.58 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1220 1236 3.7 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 644 658 4.2 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 991 1006 0.13 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 161 184 0.0014 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1110 1122 7.0 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 896 910 4.3 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1144 1159 0.57 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 972 984 8.0 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 953 968 0.16 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 877 891 0.21 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 934 950 10.0 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 187 204 0.36 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1125 1142 0.1 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 584 600 1.3 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1315 1332 1.3 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 624 641 0.052 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 1296 1313 0.0083 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 255 272 3.7 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 121 138 0.015 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Pfam PF07634 RtxA repeat 101 118 0.39 T 14-10-2018 IPR011509 RtxA toxin VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 Gene3D G3DSA:3.40.50.11050 4081 4299 5.9E-92 T 14-10-2018 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily VV2_0479 87a128e040d0063e28bc0e30541f6842 5206 SUPERFAMILY SSF158842 2364 2607 1.16E-63 T 14-10-2018 VV1_1292 e7dfe50c09740782a52131206973815c 664 Pfam PF08676 MutL C terminal dimerisation domain 480 619 7.9E-31 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VV1_1292 e7dfe50c09740782a52131206973815c 664 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 663 25.275 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VV1_1292 e7dfe50c09740782a52131206973815c 664 SUPERFAMILY SSF118116 479 662 8.76E-38 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily VV1_1292 e7dfe50c09740782a52131206973815c 664 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site VV1_1292 e7dfe50c09740782a52131206973815c 664 SMART SM01340 212 330 1.7E-57 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VV1_1292 e7dfe50c09740782a52131206973815c 664 SMART SM00853 483 625 5.3E-19 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VV1_1292 e7dfe50c09740782a52131206973815c 664 Gene3D G3DSA:2.30.42.20 480 661 5.2E-55 T 14-10-2018 VV1_1292 e7dfe50c09740782a52131206973815c 664 Gene3D G3DSA:3.30.565.10 1 216 4.9E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1292 e7dfe50c09740782a52131206973815c 664 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.5E-100 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 VV1_1292 e7dfe50c09740782a52131206973815c 664 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.8E-11 T 14-10-2018 VV1_1292 e7dfe50c09740782a52131206973815c 664 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 1.6E-39 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VV1_1292 e7dfe50c09740782a52131206973815c 664 SUPERFAMILY SSF54211 191 330 8.34E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1292 e7dfe50c09740782a52131206973815c 664 SUPERFAMILY SSF55874 1 204 3.8E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1292 e7dfe50c09740782a52131206973815c 664 Gene3D G3DSA:3.30.230.10 217 329 8.3E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_1292 e7dfe50c09740782a52131206973815c 664 Gene3D G3DSA:3.30.1370.100 524 617 5.2E-55 T 14-10-2018 VV1_1308 cfb35e90316580e773190404520a317a 412 SUPERFAMILY SSF56935 88 400 1.39E-15 T 14-10-2018 VV1_0045 cbadee33082e8583e31365dbc70538a2 222 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 7 220 1.4E-73 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VV1_0045 cbadee33082e8583e31365dbc70538a2 222 SUPERFAMILY SSF53901 14 132 3.64E-7 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 6.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 6.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 SUPERFAMILY SSF46955 4 125 3.66E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 3 142 6.1E-64 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 Gene3D G3DSA:1.10.1660.10 2 126 5.7E-31 T 14-10-2018 VV2_0936 e0b2e145c9cedab29f3b688ddb1b9c26 155 SMART SM00422 3 71 2.0E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 SUPERFAMILY SSF48230 6 335 1.7E-75 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 Gene3D G3DSA:2.70.98.10 310 560 8.9E-72 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 Gene3D G3DSA:2.60.220.10 561 663 5.4E-19 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 569 634 6.2E-12 T 14-10-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 10 293 4.0E-29 T 14-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 Gene3D G3DSA:1.50.10.100 17 308 3.1E-64 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 SUPERFAMILY SSF49863 567 665 2.35E-17 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 SUPERFAMILY SSF74650 310 564 2.46E-78 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VV2_1110 c66c03b6c52195a9d146dd039749a7ae 839 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 313 552 9.1E-66 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 31 42 2.4E-12 T 14-10-2018 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 70 78 2.4E-12 T 14-10-2018 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 106 115 2.4E-12 T 14-10-2018 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 PRINTS PR00313 NodO calcium binding signature 43 51 2.4E-12 T 14-10-2018 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 4.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 41 5.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 97 112 0.059 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 59 0.0012 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 1.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 SUPERFAMILY SSF51120 6 168 9.59E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 39 57 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 Gene3D G3DSA:2.150.10.10 3 62 2.5E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV2_1571 8dbd03c64fc22b452d68dd30983869f1 190 Gene3D G3DSA:2.150.10.10 63 187 2.0E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_1093 8943f87e37cffbfd10a2c3840d151000 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 189 3.9E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_1093 8943f87e37cffbfd10a2c3840d151000 190 Gene3D G3DSA:1.10.10.10 127 190 6.0E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1093 8943f87e37cffbfd10a2c3840d151000 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 5 189 9.6E-62 T 14-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like VV1_1093 8943f87e37cffbfd10a2c3840d151000 190 SUPERFAMILY SSF88659 123 189 4.86E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1093 8943f87e37cffbfd10a2c3840d151000 190 Pfam PF07638 ECF sigma factor 6 189 8.1E-32 T 14-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 Pfam PF13416 Bacterial extracellular solute-binding protein 47 319 7.0E-44 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 Gene3D G3DSA:3.40.190.10 135 385 1.7E-134 T 14-10-2018 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 67 85 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 354 373 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 168 187 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 148 167 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 296 317 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 33 51 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 230 249 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 PRINTS PR00181 Maltose binding protein signature 127 146 1.7E-79 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 SUPERFAMILY SSF53850 25 392 1.58E-89 T 14-10-2018 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 Gene3D G3DSA:3.40.190.10 45 354 1.7E-134 T 14-10-2018 VV2_1585 7f28260966bd2d8eee25f1e7c3bb12d6 393 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VV2_0676 038aed156524c27aad6c824c40dce6e9 325 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 111 306 1.8E-69 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop VV2_0676 038aed156524c27aad6c824c40dce6e9 325 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 5 102 2.3E-17 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain VV2_0676 038aed156524c27aad6c824c40dce6e9 325 SUPERFAMILY SSF52540 1 312 2.31E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0676 038aed156524c27aad6c824c40dce6e9 325 Gene3D G3DSA:3.40.50.300 105 312 8.5E-73 T 14-10-2018 VV2_0676 038aed156524c27aad6c824c40dce6e9 325 Gene3D G3DSA:3.40.50.720 1 104 6.6E-29 T 14-10-2018 VV2_0676 038aed156524c27aad6c824c40dce6e9 325 PIRSF PIRSF026760 1 317 1.1E-131 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 VV1_1377 09ff3ee831e39e86a7c9e23724b4d20a 335 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 325 1.5E-70 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VV1_1377 09ff3ee831e39e86a7c9e23724b4d20a 335 SUPERFAMILY SSF53067 46 165 7.12E-7 T 14-10-2018 VV1_1377 09ff3ee831e39e86a7c9e23724b4d20a 335 Gene3D G3DSA:3.30.420.40 8 323 5.6E-45 T 14-10-2018 VV1_1377 09ff3ee831e39e86a7c9e23724b4d20a 335 Pfam PF11104 Type IV pilus assembly protein PilM; 8 323 6.0E-48 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VV1_1377 09ff3ee831e39e86a7c9e23724b4d20a 335 PIRSF PIRSF019169 1 327 1.4E-88 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM VV1_1377 09ff3ee831e39e86a7c9e23724b4d20a 335 Gene3D G3DSA:3.30.1490.300 82 140 5.6E-45 T 14-10-2018 VV1_1377 09ff3ee831e39e86a7c9e23724b4d20a 335 Gene3D G3DSA:3.30.420.40 179 291 5.6E-45 T 14-10-2018 VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 SUPERFAMILY SSF50249 4 69 3.43E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 SMART SM00357 6 70 1.1E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 7 22 3.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 43 61 3.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 PRINTS PR00050 Cold shock protein signature 28 37 3.4E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 PIRSF PIRSF002599 1 70 8.2E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 5.3E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site VV1_2757 cbeb1481c0ae67e3930690f0f2c54657 70 Gene3D G3DSA:2.40.50.140 2 70 1.4E-30 T 14-10-2018 VV1_0591 5bb5a87b71261f41fcd7008530b46831 196 Gene3D G3DSA:3.40.50.10490 1 195 1.3E-72 T 14-10-2018 VV1_0591 5bb5a87b71261f41fcd7008530b46831 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 14-10-2018 VV1_0591 5bb5a87b71261f41fcd7008530b46831 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.141 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VV1_0591 5bb5a87b71261f41fcd7008530b46831 196 Pfam PF13580 SIS domain 9 144 3.8E-35 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV2_0054 858635904e3df0e419b78ffe7ef006ba 171 Pfam PF00293 NUDIX domain 33 149 2.6E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV2_0054 858635904e3df0e419b78ffe7ef006ba 171 Gene3D G3DSA:3.90.79.10 1 167 1.6E-45 T 14-10-2018 VV2_0054 858635904e3df0e419b78ffe7ef006ba 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV2_0054 858635904e3df0e419b78ffe7ef006ba 171 SUPERFAMILY SSF55811 2 168 6.5E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 SUPERFAMILY SSF49863 571 671 1.22E-12 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 Gene3D G3DSA:1.50.10.100 19 298 2.9E-57 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 317 556 1.7E-65 T 14-10-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 Gene3D G3DSA:2.60.220.10 564 669 1.2E-9 T 14-10-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 Gene3D G3DSA:2.70.98.10 314 563 2.1E-66 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 SUPERFAMILY SSF48230 8 339 1.19E-82 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 SUPERFAMILY SSF74650 313 568 9.42E-76 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VV2_1090 e306bee8a9bb989ffb4bc9ca5ba44b96 683 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 33 290 1.6E-30 T 14-10-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical VV2_1356 e1ddecbb899740a309faf518822558a4 467 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 376 466 4.5E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_1356 e1ddecbb899740a309faf518822558a4 467 Gene3D G3DSA:3.40.50.2300 367 467 1.1E-35 T 14-10-2018 VV2_1356 e1ddecbb899740a309faf518822558a4 467 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 375 459 8.3E-33 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VV2_1356 e1ddecbb899740a309faf518822558a4 467 SUPERFAMILY SSF52794 373 466 1.29E-30 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV2_1356 e1ddecbb899740a309faf518822558a4 467 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 342 2.7E-76 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VV1_2587 9a0cb28dace08c759d2e98f8064fc83d 552 Gene3D G3DSA:3.30.70.20 414 480 3.3E-11 T 14-10-2018 VV1_2587 9a0cb28dace08c759d2e98f8064fc83d 552 Pfam PF12838 4Fe-4S dicluster domain 184 230 1.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2587 9a0cb28dace08c759d2e98f8064fc83d 552 SUPERFAMILY SSF54862 149 510 9.07E-37 T 14-10-2018 VV1_2587 9a0cb28dace08c759d2e98f8064fc83d 552 Pfam PF13187 4Fe-4S dicluster domain 419 464 1.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2587 9a0cb28dace08c759d2e98f8064fc83d 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 419 430 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_2587 9a0cb28dace08c759d2e98f8064fc83d 552 Gene3D G3DSA:3.30.70.20 160 254 1.5E-12 T 14-10-2018 VV1_2587 9a0cb28dace08c759d2e98f8064fc83d 552 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 450 461 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 Gene3D G3DSA:1.20.1330.10 44 327 8.0E-75 T 14-10-2018 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 Gene3D G3DSA:1.10.8.410 328 376 2.1E-20 T 14-10-2018 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 Gene3D G3DSA:3.30.70.2120 174 275 8.0E-75 T 14-10-2018 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.6E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_1924 0aaf6f243398935b6e82c680f4246cd2 377 SUPERFAMILY SSF64518 1 376 2.75E-97 T 14-10-2018 VV1_1331 4289703cf5f9c13d4235a459a17165ac 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 4.7E-30 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VV1_1331 4289703cf5f9c13d4235a459a17165ac 260 Gene3D G3DSA:3.10.50.40 149 260 5.6E-43 T 14-10-2018 VV1_1331 4289703cf5f9c13d4235a459a17165ac 260 SUPERFAMILY SSF54534 48 253 1.19E-64 T 14-10-2018 VV1_1331 4289703cf5f9c13d4235a459a17165ac 260 Gene3D G3DSA:1.10.287.460 31 148 3.9E-32 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VV1_1331 4289703cf5f9c13d4235a459a17165ac 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 1.2E-32 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 Gene3D G3DSA:2.10.109.10 842 968 5.7E-8 T 14-10-2018 VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 SUPERFAMILY SSF52540 264 558 7.23E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 Pfam PF04851 Type III restriction enzyme, res subunit 216 365 3.4E-32 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 Gene3D G3DSA:3.40.50.300 384 583 1.9E-39 T 14-10-2018 VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 Pfam PF13091 PLD-like domain 25 161 1.8E-8 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 SMART SM00490 460 544 2.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 Gene3D G3DSA:3.40.50.300 204 381 9.5E-44 T 14-10-2018 VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 Pfam PF00271 Helicase conserved C-terminal domain 436 542 1.9E-10 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 SUPERFAMILY SSF51306 834 959 5.58E-11 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 SMART SM00487 214 392 1.4E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 Gene3D G3DSA:3.30.870.10 6 182 1.5E-20 T 14-10-2018 VV1_2188 9f982bf8faa69ee608425eaaa191d0e5 968 SUPERFAMILY SSF56024 15 154 4.32E-6 T 14-10-2018 VV1_2897 2583c7a597ce1ce5cc145b905f40e89f 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 7.4E-26 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VV1_2897 2583c7a597ce1ce5cc145b905f40e89f 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 9 57 7.9E-30 T 14-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:2.60.120.10 10 138 6.1E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF51206 8 136 1.7E-34 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00100 2 122 5.9E-27 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 SMART SM00419 160 208 4.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 SUPERFAMILY SSF46785 139 207 3.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1318 63e5d9f408005892605e5653dccdd9b1 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.4E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 9.8E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SMART SM00862 158 234 1.6E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SUPERFAMILY SSF46894 135 235 8.22E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Gene3D G3DSA:3.40.50.2300 1 123 2.6E-35 T 14-10-2018 VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SUPERFAMILY SSF52172 5 129 2.56E-40 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 SMART SM00448 5 116 4.9E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0037 751f7f4d65f40a2f6dd6b328a7ac05d5 242 Gene3D G3DSA:1.10.10.10 124 238 4.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2928 693d37d91c444c85919ffd73be221068 456 Gene3D G3DSA:1.10.275.10 1 117 8.1E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VV1_2928 693d37d91c444c85919ffd73be221068 456 Gene3D G3DSA:1.10.40.30 383 446 4.7E-158 T 14-10-2018 VV1_2928 693d37d91c444c85919ffd73be221068 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VV1_2928 693d37d91c444c85919ffd73be221068 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 9.2E-150 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_2928 693d37d91c444c85919ffd73be221068 456 Gene3D G3DSA:1.20.200.10 118 447 4.7E-158 T 14-10-2018 VV1_2928 693d37d91c444c85919ffd73be221068 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.4E-51 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VV1_2928 693d37d91c444c85919ffd73be221068 456 SUPERFAMILY SSF48557 4 448 7.38E-108 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VV1_2928 693d37d91c444c85919ffd73be221068 456 Pfam PF00206 Lyase 14 313 4.3E-75 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VV1_2928 693d37d91c444c85919ffd73be221068 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VV1_2928 693d37d91c444c85919ffd73be221068 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VV1_2928 693d37d91c444c85919ffd73be221068 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VV1_2928 693d37d91c444c85919ffd73be221068 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 Gene3D G3DSA:2.40.37.10 17 404 2.7E-151 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 Gene3D G3DSA:3.20.20.10 35 277 2.7E-151 T 14-10-2018 IPR029066 PLP-binding barrel VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.9E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 40.806 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 1.0E-166 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 7.0E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 7.0E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 7.0E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 7.0E-29 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 5.0E-25 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 6.8E-73 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 242 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 SUPERFAMILY SSF50621 261 414 1.19E-51 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV1_1126 7d469bf02ab18a2abae9426c3336750d 417 SUPERFAMILY SSF51419 27 284 7.07E-82 T 14-10-2018 IPR029066 PLP-binding barrel VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 204 219 3.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 219 235 3.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 Pfam PF12833 Helix-turn-helix domain 158 236 1.7E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 Gene3D G3DSA:1.10.10.60 130 185 2.1E-11 T 14-10-2018 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 Gene3D G3DSA:2.60.120.10 5 71 2.0E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 SUPERFAMILY SSF46689 136 186 3.36E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 SMART SM00342 152 235 7.0E-33 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 SUPERFAMILY SSF46689 188 235 3.85E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 189 231 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 SUPERFAMILY SSF51182 16 156 2.48E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_1028 e831212d1a662c6ebbeab6f70408326b 237 Gene3D G3DSA:1.10.10.60 186 237 5.0E-18 T 14-10-2018 VV1_2226 5db4b1070ad87968a5eeaa12d7a81355 264 SUPERFAMILY SSF52540 2 230 6.31E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2226 5db4b1070ad87968a5eeaa12d7a81355 264 SMART SM00382 31 226 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2226 5db4b1070ad87968a5eeaa12d7a81355 264 Gene3D G3DSA:3.40.50.300 1 257 5.0E-52 T 14-10-2018 VV1_2226 5db4b1070ad87968a5eeaa12d7a81355 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2226 5db4b1070ad87968a5eeaa12d7a81355 264 Pfam PF00005 ABC transporter 22 177 4.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 SUPERFAMILY SSF52172 393 509 1.71E-13 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 SMART SM00448 1 118 7.5E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 SMART SM00448 396 508 1.1E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 Gene3D G3DSA:3.20.20.450 138 390 9.2E-71 T 14-10-2018 IPR035919 EAL domain superfamily VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 Gene3D G3DSA:3.40.50.2300 391 514 7.3E-12 T 14-10-2018 VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 SMART SM00052 136 378 1.4E-63 T 14-10-2018 IPR001633 EAL domain VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 Gene3D G3DSA:3.40.50.2300 1 130 1.1E-19 T 14-10-2018 VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 SUPERFAMILY SSF52172 1 136 2.7E-20 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 Pfam PF00563 EAL domain 142 373 8.1E-55 T 14-10-2018 IPR001633 EAL domain VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 Pfam PF00072 Response regulator receiver domain 399 508 4.0E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 Pfam PF00072 Response regulator receiver domain 3 117 1.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3203 2c2244bd2957d4e43e43c2db554846c8 515 SUPERFAMILY SSF141868 141 386 1.22E-70 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0228 64f049e32927434e8b89886d80130719 267 SUPERFAMILY SSF141868 30 260 1.02E-40 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0228 64f049e32927434e8b89886d80130719 267 SMART SM00052 20 257 1.5E-10 T 14-10-2018 IPR001633 EAL domain VV2_0228 64f049e32927434e8b89886d80130719 267 Gene3D G3DSA:3.20.20.450 23 264 4.3E-41 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0228 64f049e32927434e8b89886d80130719 267 Pfam PF00563 EAL domain 28 252 3.3E-48 T 14-10-2018 IPR001633 EAL domain VV2_1531 6627c43802effff0f5be33ec4e29f706 393 SUPERFAMILY SSF103473 7 378 1.96E-36 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_1531 6627c43802effff0f5be33ec4e29f706 393 Gene3D G3DSA:1.20.1250.20 3 196 7.2E-7 T 14-10-2018 VV2_1531 6627c43802effff0f5be33ec4e29f706 393 Gene3D G3DSA:1.20.1250.20 200 386 1.9E-15 T 14-10-2018 VV2_1531 6627c43802effff0f5be33ec4e29f706 393 Pfam PF07690 Major Facilitator Superfamily 16 345 4.1E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_0010 2ca332ffc1d7cb693f2fa739186d49eb 273 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0010 2ca332ffc1d7cb693f2fa739186d49eb 273 Pfam PF00005 ABC transporter 29 178 1.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0010 2ca332ffc1d7cb693f2fa739186d49eb 273 Gene3D G3DSA:3.40.50.300 13 272 1.3E-60 T 14-10-2018 VV1_0010 2ca332ffc1d7cb693f2fa739186d49eb 273 SUPERFAMILY SSF52540 15 251 2.06E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0010 2ca332ffc1d7cb693f2fa739186d49eb 273 SMART SM00382 38 227 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1531 0bec567528fa752e096b88dceb65a1a0 243 SUPERFAMILY SSF88697 2 70 8.45E-17 T 14-10-2018 IPR015947 PUA-like superfamily VV1_1531 0bec567528fa752e096b88dceb65a1a0 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.2E-84 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VV1_1531 0bec567528fa752e096b88dceb65a1a0 243 Gene3D G3DSA:2.40.240.20 1 70 8.7E-22 T 14-10-2018 VV1_1531 0bec567528fa752e096b88dceb65a1a0 243 SUPERFAMILY SSF75217 75 242 5.23E-52 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_1531 0bec567528fa752e096b88dceb65a1a0 243 Pfam PF04452 RNA methyltransferase 19 236 1.2E-74 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VV1_1531 0bec567528fa752e096b88dceb65a1a0 243 PIRSF PIRSF015601 2 242 2.4E-55 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VV1_1531 0bec567528fa752e096b88dceb65a1a0 243 Gene3D G3DSA:3.40.1280.10 74 243 7.8E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 SUPERFAMILY SSF160544 250 355 2.49E-39 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 Gene3D G3DSA:3.40.1690.10 218 358 5.9E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.3E-121 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.2E-134 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV1_1948 69ddf80cd6db2542c6e3b8bb80c5030b 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.9E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.6E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 SMART SM00382 113 266 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.7E-210 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 SMART SM00994 13 52 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:3.40.50.300 59 317 3.6E-108 T 14-10-2018 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 14-10-2018 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 SMART SM01086 319 414 7.7E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 SUPERFAMILY SSF52540 63 404 7.34E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.477 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VV1_0022 e141d84fd34d7cddf77908c2905484c9 426 Gene3D G3DSA:1.10.8.60 318 426 3.1E-41 T 14-10-2018 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Pfam PF02913 FAD linked oxidases, C-terminal domain 275 521 5.9E-59 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Pfam PF01565 FAD binding domain 48 184 5.3E-29 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 SUPERFAMILY SSF55103 276 528 8.01E-56 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 SUPERFAMILY SSF46548 508 632 2.44E-23 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 547 558 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Pfam PF02754 Cysteine-rich domain 715 786 0.0081 T 14-10-2018 IPR004017 Cysteine-rich domain VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 SUPERFAMILY SSF56176 13 269 3.07E-55 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Gene3D G3DSA:1.10.1060.10 522 639 1.9E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Gene3D G3DSA:3.30.70.2740 399 482 3.2E-8 T 14-10-2018 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Gene3D G3DSA:1.10.45.10 487 521 7.2E-6 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Gene3D G3DSA:3.30.43.10 2 97 2.6E-9 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VV2_0801 ac20629dc33029929b9dc14bfa74c707 946 Pfam PF13183 4Fe-4S dicluster domain 545 617 2.8E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Gene3D G3DSA:3.10.450.40 111 196 4.2E-28 T 14-10-2018 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Gene3D G3DSA:3.10.450.490 20 110 2.1E-8 T 14-10-2018 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Gene3D G3DSA:3.10.170.10 199 355 3.1E-61 T 14-10-2018 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 SUPERFAMILY SSF55486 201 500 6.23E-87 T 14-10-2018 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Pfam PF03413 Peptidase propeptide and YPEB domain 115 191 3.7E-10 T 14-10-2018 IPR025711 PepSY domain VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 209 351 1.6E-36 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Gene3D G3DSA:2.60.120.380 509 609 1.3E-42 T 14-10-2018 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 342 358 1.9E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 425 441 1.9E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 363 374 1.9E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 308 328 1.9E-27 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 52 100 1.1E-10 T 14-10-2018 IPR011096 FTP domain VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 530 594 7.8E-10 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Gene3D G3DSA:1.10.390.10 356 505 3.4E-50 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VV2_0974 7d372bebdd70c0d0564bd48df5fb2580 609 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 354 498 5.4E-37 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 Pfam PF13487 HD domain 230 300 2.0E-18 T 14-10-2018 VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 Gene3D G3DSA:1.10.3210.10 145 362 3.2E-80 T 14-10-2018 VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 SMART SM00448 6 118 1.5E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 Gene3D G3DSA:3.40.50.2300 2 139 7.1E-41 T 14-10-2018 VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 SUPERFAMILY SSF109604 146 348 4.08E-33 T 14-10-2018 VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 SUPERFAMILY SSF52172 6 160 2.28E-42 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 SMART SM00471 167 318 1.4E-9 T 14-10-2018 IPR003607 HD/PDEase domain VV2_0078 c2d89c94bfb1e9c8eae589e28a03f1f0 378 Pfam PF00072 Response regulator receiver domain 8 118 4.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0837 c0454bc33badf9e161e612ac756caf34 279 SMART SM00382 40 232 9.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0837 c0454bc33badf9e161e612ac756caf34 279 SUPERFAMILY SSF52540 6 254 9.35E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0837 c0454bc33badf9e161e612ac756caf34 279 Gene3D G3DSA:3.40.50.300 3 279 1.8E-88 T 14-10-2018 VV1_0837 c0454bc33badf9e161e612ac756caf34 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0837 c0454bc33badf9e161e612ac756caf34 279 Pfam PF00005 ABC transporter 32 181 2.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2796 0338822aa7a8beadae550bfd942e6e55 130 Pfam PF03846 Cell division inhibitor SulA 27 96 3.2E-5 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 VV1_2796 0338822aa7a8beadae550bfd942e6e55 130 Gene3D G3DSA:3.40.50.300 16 123 2.8E-10 T 14-10-2018 VV1_2796 0338822aa7a8beadae550bfd942e6e55 130 SUPERFAMILY SSF52540 20 99 2.23E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 3.2E-176 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 Pfam PF01676 Metalloenzyme superfamily 2 397 5.6E-43 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.30.70.1250 116 237 6.3E-150 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.676 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF143856 118 234 3.66E-47 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 Gene3D G3DSA:3.40.720.10 3 406 6.3E-150 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 PIRSF PIRSF001491 1 406 2.3E-160 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VV1_1727 d5d2a042bce961253fdea37ddfb2c015 406 SUPERFAMILY SSF53649 1 406 1.05E-68 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_1920 bdaf3b3a037d4705f0b353f46129e93a 120 Pfam PF11169 Protein of unknown function (DUF2956) 11 117 1.1E-43 T 14-10-2018 IPR021339 Protein of unknown function DUF2956 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 Gene3D G3DSA:1.10.287.470 220 295 5.2E-14 T 14-10-2018 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 Gene3D G3DSA:2.40.50.100 58 88 1.7E-7 T 14-10-2018 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 Gene3D G3DSA:2.40.30.170 333 417 5.2E-14 T 14-10-2018 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 Gene3D G3DSA:2.40.50.100 210 332 5.2E-14 T 14-10-2018 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 Gene3D G3DSA:1.10.287.470 89 153 1.7E-7 T 14-10-2018 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 17 441 4.1E-113 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 Pfam PF13437 HlyD family secretion protein 296 396 1.5E-16 T 14-10-2018 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 329 4.2E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 341 365 4.2E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 4.2E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 441 4.2E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 388 4.2E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 4.2E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 421 4.2E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 SUPERFAMILY SSF111369 57 127 1.01E-5 T 14-10-2018 VV2_1516 6c7503c38ec064a130ae7ec1033b0aa8 442 Pfam PF13533 Biotin-lipoyl like 55 94 4.2E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_0982 476c9a1ff7a8be9c24258b0cf61eeeea 118 Pfam PF11777 Protein of unknown function (DUF3316) 5 113 2.1E-24 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VV2_0982 476c9a1ff7a8be9c24258b0cf61eeeea 118 PIRSF PIRSF028299 4 117 4.9E-44 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF81271 3 61 4.9E-16 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 2.8E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 6.2E-242 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.980.10 70 223 1.2E-62 T 14-10-2018 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 SMART SM00863 171 220 1.6E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.40.50.800 533 642 4.1E-30 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.1E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF02824 TGS domain 4 61 1.3E-12 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.089 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.10.20.30 3 62 1.4E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55681 244 527 1.38E-100 T 14-10-2018 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF52954 530 637 1.96E-32 T 14-10-2018 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Pfam PF03129 Anticodon binding domain 542 631 4.5E-22 T 14-10-2018 IPR004154 Anticodon-binding VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.54.20 131 188 1.2E-62 T 14-10-2018 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 Gene3D G3DSA:3.30.930.10 224 532 1.3E-130 T 14-10-2018 VV1_2397 fcf6b36e66f497db663cc92ed5bfb2a5 642 SUPERFAMILY SSF55186 65 242 6.93E-63 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 Gene3D G3DSA:2.40.50.140 286 349 6.1E-17 T 14-10-2018 VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 SUPERFAMILY SSF52540 8 247 5.99E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 Pfam PF08402 TOBE domain 279 355 2.4E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 SUPERFAMILY SSF50331 240 357 2.31E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 Gene3D G3DSA:3.40.50.300 7 225 5.5E-69 T 14-10-2018 VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 Pfam PF00005 ABC transporter 23 165 4.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 SMART SM00382 32 215 2.0E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 Gene3D G3DSA:2.40.50.940 226 355 6.1E-17 T 14-10-2018 VV2_1669 72f5ebc2c42bc1707f7bf45a94dd9614 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 7.3E-164 T 14-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 VV2_0097 e1af4a36a12f84e29b7f0e8777a863dc 126 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 80 93 - T 14-10-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site VV2_0097 e1af4a36a12f84e29b7f0e8777a863dc 126 Gene3D G3DSA:3.10.450.10 38 118 1.1E-10 T 14-10-2018 VV2_0097 e1af4a36a12f84e29b7f0e8777a863dc 126 SUPERFAMILY SSF54403 42 115 3.19E-17 T 14-10-2018 VV2_0097 e1af4a36a12f84e29b7f0e8777a863dc 126 Pfam PF00031 Cystatin domain 44 108 6.8E-8 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Gene3D G3DSA:1.10.3500.10 112 498 2.6E-160 T 14-10-2018 IPR023323 Tex-like domain superfamily VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Gene3D G3DSA:3.30.420.140 325 451 2.6E-160 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Gene3D G3DSA:1.10.150.310 499 630 7.3E-50 T 14-10-2018 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 SUPERFAMILY SSF53098 322 469 4.02E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Pfam PF12836 Helix-hairpin-helix motif 491 555 7.0E-28 T 14-10-2018 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 SUPERFAMILY SSF158832 3 321 7.45E-120 T 14-10-2018 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.7E-71 T 14-10-2018 IPR018974 Tex-like protein, N-terminal VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 SUPERFAMILY SSF50249 638 724 5.37E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Gene3D G3DSA:1.10.10.650 2 109 2.8E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 SUPERFAMILY SSF47781 470 557 1.33E-27 T 14-10-2018 IPR010994 RuvA domain 2-like VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Pfam PF00575 S1 RNA binding domain 648 720 2.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Gene3D G3DSA:2.40.50.140 631 726 4.2E-29 T 14-10-2018 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 Pfam PF16921 Tex protein YqgF-like domain 327 451 1.8E-56 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 SUPERFAMILY SSF47781 560 632 1.16E-18 T 14-10-2018 IPR010994 RuvA domain 2-like VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 SMART SM00316 649 720 3.1E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_0860 1a4e14effffb6e89827b0fb87f106480 774 SMART SM00732 326 424 1.2E-40 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VV1_0352 ee7d51d7eac30c346e6c2871a51c45ce 170 SUPERFAMILY SSF54523 5 149 3.22E-15 T 14-10-2018 VV1_0352 ee7d51d7eac30c346e6c2871a51c45ce 170 PIRSF PIRSF024622 1 170 1.1E-82 T 14-10-2018 IPR016824 Tfp pilus assembly protein FimT VV1_0352 ee7d51d7eac30c346e6c2871a51c45ce 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 3.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0352 ee7d51d7eac30c346e6c2871a51c45ce 170 Pfam PF12019 Type II transport protein GspH 42 138 2.1E-8 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VV1_0352 ee7d51d7eac30c346e6c2871a51c45ce 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 2.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0352 ee7d51d7eac30c346e6c2871a51c45ce 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0352 ee7d51d7eac30c346e6c2871a51c45ce 170 Gene3D G3DSA:3.30.700.10 5 163 8.5E-10 T 14-10-2018 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 SUPERFAMILY SSF81301 33 172 2.45E-19 T 14-10-2018 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 2.8E-35 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 SUPERFAMILY SSF109604 416 593 5.34E-15 T 14-10-2018 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 Pfam PF01966 HD domain 452 584 7.1E-14 T 14-10-2018 IPR006674 HD domain VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 PIRSF PIRSF006288 6 873 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 Pfam PF01909 Nucleotidyltransferase domain 69 124 6.2E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 Gene3D G3DSA:1.10.3210.10 435 591 7.9E-10 T 14-10-2018 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 873 335.768 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 SUPERFAMILY SSF55021 796 854 4.16E-7 T 14-10-2018 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 SUPERFAMILY SSF55021 689 762 7.5E-8 T 14-10-2018 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 SUPERFAMILY SSF81593 187 310 5.1E-9 T 14-10-2018 VV1_1857 cf6c9b8df80e0bc97c87e813e152729a 873 SMART SM00471 447 594 1.8E-10 T 14-10-2018 IPR003607 HD/PDEase domain VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 138 2.0E-12 T 14-10-2018 IPR000014 PAS domain VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 Gene3D G3DSA:3.30.450.20 17 131 2.9E-16 T 14-10-2018 VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 Gene3D G3DSA:3.30.70.270 140 309 6.3E-17 T 14-10-2018 VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 SMART SM00052 313 559 3.0E-66 T 14-10-2018 IPR001633 EAL domain VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 SMART SM00267 134 303 1.2E-7 T 14-10-2018 IPR000160 GGDEF domain VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 Pfam PF00563 EAL domain 320 554 5.5E-63 T 14-10-2018 IPR001633 EAL domain VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 Gene3D G3DSA:3.20.20.450 313 566 9.6E-78 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 SUPERFAMILY SSF55785 26 136 1.5E-16 T 14-10-2018 IPR035965 PAS domain superfamily VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 SUPERFAMILY SSF141868 318 564 1.83E-72 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 SUPERFAMILY SSF55073 152 304 1.18E-14 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 Pfam PF08447 PAS fold 45 121 4.8E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 296 4.1E-12 T 14-10-2018 IPR000160 GGDEF domain VV1_2278 94743fdb5d48f89c4f3f47890c85bab7 571 SMART SM00086 94 134 1.0E-5 T 14-10-2018 IPR001610 PAC motif VV2_1181 e99c7ab526aadf803ba80296d33fdc52 251 Gene3D G3DSA:3.40.190.10 111 212 1.9E-15 T 14-10-2018 VV2_1181 e99c7ab526aadf803ba80296d33fdc52 251 SUPERFAMILY SSF53850 22 250 6.32E-23 T 14-10-2018 VV2_1181 e99c7ab526aadf803ba80296d33fdc52 251 Gene3D G3DSA:3.40.190.10 33 250 1.9E-15 T 14-10-2018 VV2_1181 e99c7ab526aadf803ba80296d33fdc52 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 7.1E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_0847 7df19e210138be70971b475047f04bfc 210 SUPERFAMILY SSF74653 121 207 1.01E-17 T 14-10-2018 VV1_0847 7df19e210138be70971b475047f04bfc 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 2.1E-11 T 14-10-2018 IPR006260 TonB/TolA, C-terminal VV1_0847 7df19e210138be70971b475047f04bfc 210 Gene3D G3DSA:3.30.1150.10 111 209 5.5E-21 T 14-10-2018 VV1_0847 7df19e210138be70971b475047f04bfc 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 5.6E-15 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VV1_2739 5516376034ac2a202536417951701cad 513 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 3.3E-140 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 Gene3D G3DSA:3.20.20.150 10 292 5.8E-110 T 14-10-2018 VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 4.1E-39 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 SUPERFAMILY SSF51658 12 287 9.3E-98 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 SMART SM00518 12 288 1.6E-120 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 285 2.2E-106 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VV1_0541 fd9d0fa562e7e73a787b0ecbf48a8b73 293 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.034 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 SUPERFAMILY SSF56042 153 315 1.0E-35 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 Gene3D G3DSA:3.30.1330.10 13 155 4.5E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 14 332 27.139 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 40 149 4.9E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 161 309 1.7E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 15 332 4.4E-103 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 SUPERFAMILY SSF55326 15 149 6.54E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 PIRSF PIRSF005303 8 332 2.8E-82 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VV1_0317 0ed856e150b00668bc8c271bdfa64146 334 Gene3D G3DSA:3.90.650.10 156 333 5.1E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 SUPERFAMILY SSF54631 7 114 3.03E-20 T 14-10-2018 VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 Gene3D G3DSA:3.90.550.10 122 346 7.0E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 SMART SM00116 70 117 32.0 T 14-10-2018 IPR000644 CBS domain VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 SMART SM00116 6 54 0.15 T 14-10-2018 IPR000644 CBS domain VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 Pfam PF00571 CBS domain 66 106 9.4E-4 T 14-10-2018 IPR000644 CBS domain VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 Pfam PF00571 CBS domain 9 54 1.4E-6 T 14-10-2018 IPR000644 CBS domain VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 Gene3D G3DSA:3.10.580.10 1 116 5.7E-21 T 14-10-2018 VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 SUPERFAMILY SSF53448 79 344 4.96E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0804 474bffa7407654ecfc3e7cdfea8ee467 348 Pfam PF00483 Nucleotidyl transferase 124 343 6.1E-35 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 487 5.2E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 SUPERFAMILY SSF47384 281 353 3.53E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 SUPERFAMILY SSF55874 374 490 1.26E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 Pfam PF11884 Domain of unknown function (DUF3404) 29 285 1.3E-109 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 SMART SM00388 286 353 5.9E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 SMART SM00387 391 489 5.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 Gene3D G3DSA:1.10.287.130 293 350 5.8E-18 T 14-10-2018 VV2_0314 8370ac8fc3984c6b45bb6eb5046dd350 494 Gene3D G3DSA:3.30.565.10 351 486 5.8E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2082 aac52f757a43433fea106e8de0511076 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 5.5E-16 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VV1_2082 aac52f757a43433fea106e8de0511076 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.2E-162 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VV1_2082 aac52f757a43433fea106e8de0511076 414 Pfam PF02687 FtsX-like permease family 300 407 1.5E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV1_2082 aac52f757a43433fea106e8de0511076 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 9.9E-233 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 VV2_1145 9d1a4671c47b7ff2af9d32ac5bbe8c18 204 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 VV2_1145 9d1a4671c47b7ff2af9d32ac5bbe8c18 204 SMART SM00855 3 157 5.0E-20 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VV2_1145 9d1a4671c47b7ff2af9d32ac5bbe8c18 204 PIRSF PIRSF000709 1 196 4.3E-12 T 14-10-2018 VV2_1145 9d1a4671c47b7ff2af9d32ac5bbe8c18 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 176 2.8E-39 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VV2_1145 9d1a4671c47b7ff2af9d32ac5bbe8c18 204 Gene3D G3DSA:3.40.50.1240 2 190 7.6E-45 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VV2_1145 9d1a4671c47b7ff2af9d32ac5bbe8c18 204 SUPERFAMILY SSF53254 2 183 6.02E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 SUPERFAMILY SSF50447 579 661 3.12E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-8 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 331 381 4.0E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 SUPERFAMILY SSF50447 808 904 2.55E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 410 565 8.8E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Gene3D G3DSA:2.40.30.10 808 905 5.5E-34 T 14-10-2018 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 ProSitePatterns PS01176 Initiation factor 2 signature. 857 879 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Gene3D G3DSA:3.30.56.50 2 50 4.1E-24 T 14-10-2018 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Gene3D G3DSA:3.40.50.10050 701 807 5.5E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 324 906 1.1E-285 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Pfam PF00009 Elongation factor Tu GTP binding domain 410 567 7.5E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Gene3D G3DSA:3.40.50.300 403 577 9.3E-71 T 14-10-2018 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 SUPERFAMILY SSF52156 684 813 1.83E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 904 17.696 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 SUPERFAMILY SSF52540 400 573 4.29E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 1.6E-15 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Pfam PF11987 Translation-initiation factor 2 691 796 9.7E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 SUPERFAMILY SSF46955 3 50 1.43E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV1_1696 cd3f129b793aa64dc648abbe533a602d 907 Gene3D G3DSA:2.40.30.10 578 696 1.5E-40 T 14-10-2018 VV1_0686 c439bc915586e5e7cb36f2b54d53fdfd 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 7.9E-84 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 VV1_0686 c439bc915586e5e7cb36f2b54d53fdfd 321 Gene3D G3DSA:1.20.1420.30 35 309 2.7E-87 T 14-10-2018 VV1_0686 c439bc915586e5e7cb36f2b54d53fdfd 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.0E-27 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VV1_0686 c439bc915586e5e7cb36f2b54d53fdfd 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 2.0E-29 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VV1_0686 c439bc915586e5e7cb36f2b54d53fdfd 321 Gene3D G3DSA:1.20.58.1130 8 206 2.7E-87 T 14-10-2018 VV1_1701 a0606f8e5638701e386610cb7016c917 89 Pfam PF00312 Ribosomal protein S15 8 88 4.0E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1701 a0606f8e5638701e386610cb7016c917 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.7E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1701 a0606f8e5638701e386610cb7016c917 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1701 a0606f8e5638701e386610cb7016c917 89 SMART SM01387 8 88 5.8E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1701 a0606f8e5638701e386610cb7016c917 89 SUPERFAMILY SSF47060 3 89 1.35E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding VV1_1701 a0606f8e5638701e386610cb7016c917 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-30 T 14-10-2018 VV1_1701 a0606f8e5638701e386610cb7016c917 89 Gene3D G3DSA:1.10.287.10 2 89 4.0E-35 T 14-10-2018 VV1_1701 a0606f8e5638701e386610cb7016c917 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1013 31949c4cc981f4daafc08fa174f62b2c 293 Gene3D G3DSA:1.10.10.2830 117 230 4.9E-33 T 14-10-2018 VV1_1013 31949c4cc981f4daafc08fa174f62b2c 293 Pfam PF02195 ParB-like nuclease domain 42 130 2.7E-29 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VV1_1013 31949c4cc981f4daafc08fa174f62b2c 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 214 2.2E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VV1_1013 31949c4cc981f4daafc08fa174f62b2c 293 Gene3D G3DSA:3.90.1530.30 53 116 7.5E-28 T 14-10-2018 VV1_1013 31949c4cc981f4daafc08fa174f62b2c 293 SMART SM00470 40 130 1.1E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VV1_1013 31949c4cc981f4daafc08fa174f62b2c 293 SUPERFAMILY SSF110849 43 174 1.36E-33 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:3.30.70.1430 557 667 5.4E-251 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 SUPERFAMILY SSF82693 136 317 6.02E-8 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:3.30.70.1440 668 859 5.4E-251 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 1.2E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 1.2E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 1.2E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:1.20.1640.10 500 1019 5.4E-251 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 SUPERFAMILY SSF82714 725 797 1.15E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 SUPERFAMILY SSF82714 177 259 2.09E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 2.3E-157 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 SUPERFAMILY SSF82866 797 1022 2.49E-47 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:1.20.1640.10 8 499 5.4E-251 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 SUPERFAMILY SSF82866 286 480 4.71E-34 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:3.30.2090.10 173 265 5.4E-251 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:3.30.2090.10 715 802 5.4E-251 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 SUPERFAMILY SSF82693 38 131 7.32E-18 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:3.30.70.1320 131 318 5.4E-251 T 14-10-2018 VV2_1320 0d7b533028d47b5316e5d7fc4a930ee4 1033 Gene3D G3DSA:3.30.70.1430 38 810 5.4E-251 T 14-10-2018 VV1_0833 27fe97cfa6583f948daae4788429cf48 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.3E-44 T 14-10-2018 IPR013527 YicC-like, N-terminal VV1_0833 27fe97cfa6583f948daae4788429cf48 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 3.8E-119 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VV1_0833 27fe97cfa6583f948daae4788429cf48 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 2.3E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 VV2_1575 c1b4cad121e1ebd2a25845ae8a0682de 437 Pfam PF01943 Polysaccharide biosynthesis protein 28 298 2.1E-7 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VV1_1858 05e59a98266ce73064cbe000ca9a283c 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VV1_1858 05e59a98266ce73064cbe000ca9a283c 292 SUPERFAMILY SSF55920 3 280 9.03E-81 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VV1_1858 05e59a98266ce73064cbe000ca9a283c 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.49 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VV1_1858 05e59a98266ce73064cbe000ca9a283c 292 Pfam PF00557 Metallopeptidase family M24 12 271 3.1E-46 T 14-10-2018 IPR000994 Peptidase M24 VV1_1858 05e59a98266ce73064cbe000ca9a283c 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 4.8E-82 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VV1_1858 05e59a98266ce73064cbe000ca9a283c 292 Gene3D G3DSA:3.90.230.10 1 290 2.7E-103 T 14-10-2018 VV1_1462 a623598472df8c18859cdf48463908ab 320 SUPERFAMILY SSF51735 103 290 3.26E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1462 a623598472df8c18859cdf48463908ab 320 Gene3D G3DSA:3.40.50.720 99 288 2.0E-111 T 14-10-2018 VV1_1462 a623598472df8c18859cdf48463908ab 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 320 1.5E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VV1_1462 a623598472df8c18859cdf48463908ab 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 2.1E-56 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV1_1462 a623598472df8c18859cdf48463908ab 320 SUPERFAMILY SSF52283 4 139 2.65E-32 T 14-10-2018 VV1_1462 a623598472df8c18859cdf48463908ab 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV1_1462 a623598472df8c18859cdf48463908ab 320 Gene3D G3DSA:3.40.50.720 26 317 2.0E-111 T 14-10-2018 VV1_1462 a623598472df8c18859cdf48463908ab 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV2_0376 4eb92c23286574828c49b10671351953 1370 Gene3D G3DSA:3.30.565.10 735 910 7.2E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0376 4eb92c23286574828c49b10671351953 1370 SUPERFAMILY SSF52172 981 1096 8.4E-26 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0376 4eb92c23286574828c49b10671351953 1370 SMART SM00304 340 392 6.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0376 4eb92c23286574828c49b10671351953 1370 SMART SM00387 783 906 6.5E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 904 1.8E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF00672 HAMP domain 353 389 6.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0376 4eb92c23286574828c49b10671351953 1370 SUPERFAMILY SSF158472 341 389 3.92E-9 T 14-10-2018 VV2_0376 4eb92c23286574828c49b10671351953 1370 SUPERFAMILY SSF55781 380 541 1.1E-17 T 14-10-2018 VV2_0376 4eb92c23286574828c49b10671351953 1370 SMART SM00448 1105 1219 4.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0376 4eb92c23286574828c49b10671351953 1370 SMART SM00448 1251 1365 6.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0376 4eb92c23286574828c49b10671351953 1370 SMART SM00448 983 1093 6.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0376 4eb92c23286574828c49b10671351953 1370 Gene3D G3DSA:3.30.450.40 399 546 2.3E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_0376 4eb92c23286574828c49b10671351953 1370 SUPERFAMILY SSF52172 1106 1222 1.57E-21 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0376 4eb92c23286574828c49b10671351953 1370 Gene3D G3DSA:1.10.287.130 632 734 3.7E-23 T 14-10-2018 VV2_0376 4eb92c23286574828c49b10671351953 1370 Gene3D G3DSA:1.20.1480.50 300 395 1.8E-12 T 14-10-2018 VV2_0376 4eb92c23286574828c49b10671351953 1370 Gene3D G3DSA:3.40.50.12740 983 1100 1.2E-28 T 14-10-2018 VV2_0376 4eb92c23286574828c49b10671351953 1370 Gene3D G3DSA:3.40.50.12740 1250 1370 1.1E-40 T 14-10-2018 VV2_0376 4eb92c23286574828c49b10671351953 1370 SMART SM00388 668 736 1.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF00072 Response regulator receiver domain 1108 1215 8.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF00072 Response regulator receiver domain 986 1092 6.7E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF00072 Response regulator receiver domain 1253 1365 3.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF02743 Cache domain 41 302 4.4E-14 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF13185 GAF domain 409 540 1.1E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_0376 4eb92c23286574828c49b10671351953 1370 SUPERFAMILY SSF52172 1249 1369 4.41E-38 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0376 4eb92c23286574828c49b10671351953 1370 Gene3D G3DSA:3.40.50.2300 1101 1236 5.3E-23 T 14-10-2018 VV2_0376 4eb92c23286574828c49b10671351953 1370 SUPERFAMILY SSF47384 655 737 6.08E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0376 4eb92c23286574828c49b10671351953 1370 SUPERFAMILY SSF55874 725 904 5.76E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0376 4eb92c23286574828c49b10671351953 1370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 669 736 1.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0376 4eb92c23286574828c49b10671351953 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 859 3.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0376 4eb92c23286574828c49b10671351953 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 845 3.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0376 4eb92c23286574828c49b10671351953 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 890 903 3.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0376 4eb92c23286574828c49b10671351953 1370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 884 3.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 Gene3D G3DSA:2.40.50.180 39 153 1.5E-28 T 14-10-2018 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 Gene3D G3DSA:2.30.30.40 23 147 1.5E-28 T 14-10-2018 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 PIRSF PIRSF002867 1 308 2.5E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 SMART SM00260 17 153 6.3E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 Pfam PF00072 Response regulator receiver domain 184 302 8.5E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 SUPERFAMILY SSF50341 16 157 1.26E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 Gene3D G3DSA:3.40.50.2300 170 308 1.3E-25 T 14-10-2018 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 Pfam PF01584 CheW-like domain 21 155 8.5E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 SUPERFAMILY SSF52172 183 306 5.55E-26 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0228 95b9670cfe68907bb6694ab74ab9ef81 308 SMART SM00448 182 302 2.0E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1637 a29c945f421c36bfeeadfd191a0e2ba6 291 Gene3D G3DSA:1.10.1040.10 167 291 2.7E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV2_1637 a29c945f421c36bfeeadfd191a0e2ba6 291 SUPERFAMILY SSF51735 4 166 3.52E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1637 a29c945f421c36bfeeadfd191a0e2ba6 291 SUPERFAMILY SSF48179 166 289 5.67E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV2_1637 a29c945f421c36bfeeadfd191a0e2ba6 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 162 1.2E-47 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VV2_1637 a29c945f421c36bfeeadfd191a0e2ba6 291 PIRSF PIRSF000103 1 291 6.1E-75 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VV2_1637 a29c945f421c36bfeeadfd191a0e2ba6 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 2.2E-32 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VV2_1637 a29c945f421c36bfeeadfd191a0e2ba6 291 Gene3D G3DSA:3.40.50.720 2 166 5.3E-50 T 14-10-2018 VV2_0508 7fc4689b7ebb7c703bb3ed047e6b1c47 205 Gene3D G3DSA:3.40.30.10 1 83 1.7E-32 T 14-10-2018 VV2_0508 7fc4689b7ebb7c703bb3ed047e6b1c47 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 7.7E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV2_0508 7fc4689b7ebb7c703bb3ed047e6b1c47 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 192 1.3E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VV2_0508 7fc4689b7ebb7c703bb3ed047e6b1c47 205 SUPERFAMILY SSF47616 72 201 6.68E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV2_0508 7fc4689b7ebb7c703bb3ed047e6b1c47 205 SUPERFAMILY SSF52833 1 77 7.88E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0508 7fc4689b7ebb7c703bb3ed047e6b1c47 205 Gene3D G3DSA:1.20.1050.10 84 198 2.6E-33 T 14-10-2018 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 SUPERFAMILY SSF102114 5 310 5.89E-89 T 14-10-2018 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 SMART SM00729 43 255 3.3E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.983 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.4E-21 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 Gene3D G3DSA:3.20.20.70 4 315 2.4E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 SMART SM00876 220 312 5.6E-46 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 3.5E-126 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 Pfam PF04055 Radical SAM superfamily 50 199 2.8E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_2943 5549cd5f41806c96e87e137da408b16b 350 PIRSF PIRSF001619 1 319 2.9E-139 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VV2_0593 3b7fd6497389a1c89c0c1b77baf98046 130 SUPERFAMILY SSF55298 18 126 6.6E-30 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV2_0593 3b7fd6497389a1c89c0c1b77baf98046 130 Gene3D G3DSA:3.30.1330.40 16 129 1.5E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV2_0593 3b7fd6497389a1c89c0c1b77baf98046 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 2.4E-22 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VV1_2620 83aee72b43a5d678d768efaa3901b90a 477 Gene3D G3DSA:1.20.210.10 6 475 3.5E-205 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_2620 83aee72b43a5d678d768efaa3901b90a 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 1.1E-229 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VV1_2620 83aee72b43a5d678d768efaa3901b90a 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 7.9E-116 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_2620 83aee72b43a5d678d768efaa3901b90a 477 SUPERFAMILY SSF81442 11 469 1.09E-121 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_2620 83aee72b43a5d678d768efaa3901b90a 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 Pfam PF03466 LysR substrate binding domain 90 285 4.2E-44 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 SUPERFAMILY SSF53850 90 286 2.17E-39 T 14-10-2018 VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:3.40.190.10 165 268 1.5E-37 T 14-10-2018 VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:1.10.10.10 3 89 9.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 Gene3D G3DSA:3.40.190.10 92 277 1.5E-37 T 14-10-2018 VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 SUPERFAMILY SSF46785 3 111 4.61E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0234 e3c173540fb50809bab8b1acbd1a06c7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1376 46adef35172c08a67c91102df3d521d9 837 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 768 1.2E-168 T 14-10-2018 VV1_1376 46adef35172c08a67c91102df3d521d9 837 Gene3D G3DSA:3.40.710.10 243 331 2.8E-9 T 14-10-2018 VV1_1376 46adef35172c08a67c91102df3d521d9 837 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 709 2.9E-27 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV1_1376 46adef35172c08a67c91102df3d521d9 837 Pfam PF17092 Penicillin-binding protein OB-like domain 317 435 1.6E-31 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1376 46adef35172c08a67c91102df3d521d9 837 Gene3D G3DSA:3.40.710.10 419 811 1.9E-94 T 14-10-2018 VV1_1376 46adef35172c08a67c91102df3d521d9 837 Pfam PF00912 Transglycosylase 55 229 5.9E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1376 46adef35172c08a67c91102df3d521d9 837 SUPERFAMILY SSF56601 211 821 3.22E-117 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_1376 46adef35172c08a67c91102df3d521d9 837 SUPERFAMILY SSF53955 43 255 5.06E-77 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_1376 46adef35172c08a67c91102df3d521d9 837 Gene3D G3DSA:1.10.3810.10 48 242 3.0E-77 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 SUPERFAMILY SSF53720 553 1037 6.41E-128 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 Gene3D G3DSA:3.40.605.10 549 1036 2.9E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 PIRSF PIRSF000197 3 1042 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 Pfam PF00171 Aldehyde dehydrogenase family 582 1036 2.8E-119 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 Pfam PF01619 Proline dehydrogenase 197 490 1.7E-93 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 SUPERFAMILY SSF51730 190 532 5.89E-115 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 SUPERFAMILY SSF81935 17 188 2.48E-64 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 Gene3D G3DSA:3.40.309.10 813 1005 2.9E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 Gene3D G3DSA:3.20.20.220 147 525 1.8E-131 T 14-10-2018 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 8.9E-46 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VV2_1118 689ea3d228148a65acea3c26b2bca123 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1036 5.9E-251 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VV2_0337 aa0626dc72823ac3af582dc0e5884579 706 Gene3D G3DSA:3.20.70.20 121 687 5.4E-234 T 14-10-2018 VV2_0337 aa0626dc72823ac3af582dc0e5884579 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 5.8E-200 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VV2_0337 aa0626dc72823ac3af582dc0e5884579 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.8E-183 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VV2_0337 aa0626dc72823ac3af582dc0e5884579 706 Pfam PF03477 ATP cone domain 4 89 1.8E-21 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VV2_0337 aa0626dc72823ac3af582dc0e5884579 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VV2_0337 aa0626dc72823ac3af582dc0e5884579 706 SUPERFAMILY SSF51998 121 687 4.26E-194 T 14-10-2018 VV2_1290 d632b2d93cbbcda6a9af5f169a0b31c1 277 SUPERFAMILY SSF53850 106 243 1.63E-14 T 14-10-2018 VV2_1290 d632b2d93cbbcda6a9af5f169a0b31c1 277 Gene3D G3DSA:3.40.190.10 107 201 2.6E-6 T 14-10-2018 VV2_1290 d632b2d93cbbcda6a9af5f169a0b31c1 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 106 241 1.4E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_1290 d632b2d93cbbcda6a9af5f169a0b31c1 277 Gene3D G3DSA:3.40.190.10 202 239 2.6E-6 T 14-10-2018 VV1_0612 1f5831433ca3bcae1be0ada7672c7b14 441 Gene3D G3DSA:1.20.1600.10 23 440 1.2E-115 T 14-10-2018 VV1_0612 1f5831433ca3bcae1be0ada7672c7b14 441 Pfam PF02321 Outer membrane efflux protein 25 214 1.3E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV1_0612 1f5831433ca3bcae1be0ada7672c7b14 441 Pfam PF02321 Outer membrane efflux protein 238 423 9.4E-33 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV1_0612 1f5831433ca3bcae1be0ada7672c7b14 441 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 435 9.0E-105 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VV1_0612 1f5831433ca3bcae1be0ada7672c7b14 441 SUPERFAMILY SSF56954 1 429 1.7E-91 T 14-10-2018 VV1_0612 1f5831433ca3bcae1be0ada7672c7b14 441 PIRSF PIRSF001892 22 430 5.0E-50 T 14-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 VV1_0612 1f5831433ca3bcae1be0ada7672c7b14 441 PIRSF PIRSF001892 1 98 7.7E-8 T 14-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 VV1_0146 3b6f42efc6dc4e81a2d3bbf3e5938514 142 Gene3D G3DSA:3.30.428.10 1 142 1.0E-43 T 14-10-2018 IPR036265 HIT-like superfamily VV1_0146 3b6f42efc6dc4e81a2d3bbf3e5938514 142 Pfam PF01230 HIT domain 11 99 2.6E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VV1_0146 3b6f42efc6dc4e81a2d3bbf3e5938514 142 SUPERFAMILY SSF54197 3 133 1.91E-34 T 14-10-2018 IPR036265 HIT-like superfamily VV1_0146 3b6f42efc6dc4e81a2d3bbf3e5938514 142 PIRSF PIRSF000714 2 141 7.8E-54 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 Pfam PF13487 HD domain 233 303 2.2E-19 T 14-10-2018 VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 Gene3D G3DSA:3.40.50.2300 4 141 9.0E-37 T 14-10-2018 VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 SMART SM00471 170 321 2.8E-9 T 14-10-2018 IPR003607 HD/PDEase domain VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 SMART SM00448 9 121 1.3E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 Pfam PF00072 Response regulator receiver domain 11 121 1.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 SUPERFAMILY SSF109604 147 349 7.54E-34 T 14-10-2018 VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 SUPERFAMILY SSF52172 8 155 3.7E-37 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0981 2d995ed9f0e2bafaea66424fb0cd786b 364 Gene3D G3DSA:1.10.3210.10 148 364 9.8E-75 T 14-10-2018 VV1_0853 6c01e89c6198c1781432f8771c4bbcf7 228 SUPERFAMILY SSF75217 4 177 1.24E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_0853 6c01e89c6198c1781432f8771c4bbcf7 228 Gene3D G3DSA:3.40.1280.10 1 190 2.0E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_0853 6c01e89c6198c1781432f8771c4bbcf7 228 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.144 T 14-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 VV1_0853 6c01e89c6198c1781432f8771c4bbcf7 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.1E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV1_0853 6c01e89c6198c1781432f8771c4bbcf7 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 2.0E-23 T 14-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 SUPERFAMILY SSF52016 162 372 4.12E-71 T 14-10-2018 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 6.0E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 SUPERFAMILY SSF53732 379 860 2.75E-146 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Gene3D G3DSA:1.25.40.310 1 161 3.7E-71 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.7E-99 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 PIRSF PIRSF036687 1 859 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Gene3D G3DSA:3.20.19.10 162 361 3.5E-82 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Gene3D G3DSA:3.40.1060.10 385 681 2.1E-147 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Gene3D G3DSA:3.30.499.10 402 529 2.1E-147 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Gene3D G3DSA:3.30.499.10 683 865 9.7E-72 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 SUPERFAMILY SSF74778 2 160 1.57E-67 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VV1_1653 84108ea11e1c63b0dc6e84c1b1a94437 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.3E-65 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VV2_0864 9a08a2415ff59a2b9a3b380b18415a67 1245 Pfam PF10462 Peptidase M66 352 657 2.1E-95 T 14-10-2018 IPR019503 Peptidase M66 domain GO:0004222 VV2_0864 9a08a2415ff59a2b9a3b380b18415a67 1245 Gene3D G3DSA:2.60.40.10 164 255 1.9E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0864 9a08a2415ff59a2b9a3b380b18415a67 1245 Pfam PF12561 ToxR activated gene A lipoprotein 723 856 5.6E-62 T 14-10-2018 IPR022218 ToxR activated gene A lipoprotein VV2_0864 9a08a2415ff59a2b9a3b380b18415a67 1245 Gene3D G3DSA:3.30.160.280 1184 1245 2.3E-13 T 14-10-2018 VV2_0864 9a08a2415ff59a2b9a3b380b18415a67 1245 Gene3D G3DSA:3.30.160.280 1100 1171 7.6E-7 T 14-10-2018 VV2_0864 9a08a2415ff59a2b9a3b380b18415a67 1245 Gene3D G3DSA:3.30.160.280 1012 1077 1.0E-14 T 14-10-2018 VV1_2774 79be5c0b03d5dbb80627f8d349a927ab 364 SUPERFAMILY SSF53335 80 351 2.78E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2774 79be5c0b03d5dbb80627f8d349a927ab 364 Pfam PF05971 Protein of unknown function (DUF890) 42 352 4.7E-122 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VV1_2774 79be5c0b03d5dbb80627f8d349a927ab 364 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 42 354 53.053 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VV1_2774 79be5c0b03d5dbb80627f8d349a927ab 364 Gene3D G3DSA:3.40.50.150 75 352 2.3E-73 T 14-10-2018 VV1_2774 79be5c0b03d5dbb80627f8d349a927ab 364 PIRSF PIRSF029038 31 364 5.2E-158 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VV1_0616 e369c55535a0423a49558cd2903a0079 250 Pfam PF00520 Ion transport protein 41 209 3.4E-17 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VV1_0616 e369c55535a0423a49558cd2903a0079 250 Gene3D G3DSA:1.10.287.70 125 217 3.4E-23 T 14-10-2018 VV1_0616 e369c55535a0423a49558cd2903a0079 250 PRINTS PR00169 Potassium channel signature 123 146 1.3E-7 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_0616 e369c55535a0423a49558cd2903a0079 250 PRINTS PR00169 Potassium channel signature 183 209 1.3E-7 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_0616 e369c55535a0423a49558cd2903a0079 250 PRINTS PR00169 Potassium channel signature 154 176 1.3E-7 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_0616 e369c55535a0423a49558cd2903a0079 250 SUPERFAMILY SSF81324 13 210 3.53E-48 T 14-10-2018 VV1_0616 e369c55535a0423a49558cd2903a0079 250 Gene3D G3DSA:1.20.120.350 6 124 2.7E-16 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily VV2_0962 9f58a67f595f37912b4b5a77095939bd 259 Pfam PF00970 Oxidoreductase FAD-binding domain 28 101 3.7E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VV2_0962 9f58a67f595f37912b4b5a77095939bd 259 Gene3D G3DSA:2.40.30.10 1 107 2.8E-24 T 14-10-2018 VV2_0962 9f58a67f595f37912b4b5a77095939bd 259 SUPERFAMILY SSF63380 12 107 2.89E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV2_0962 9f58a67f595f37912b4b5a77095939bd 259 Pfam PF00175 Oxidoreductase NAD-binding domain 124 234 4.8E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV2_0962 9f58a67f595f37912b4b5a77095939bd 259 Gene3D G3DSA:3.40.50.80 110 259 6.6E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV2_0962 9f58a67f595f37912b4b5a77095939bd 259 SUPERFAMILY SSF52343 117 259 5.76E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 Gene3D G3DSA:3.20.20.80 519 642 1.3E-14 T 14-10-2018 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 165 604 8.3E-120 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 9.2E-14 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 SUPERFAMILY SSF51445 165 617 6.45E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 188 209 4.6E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 290 308 4.6E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 159 176 4.6E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 312 325 4.6E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 240 257 4.6E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 PRINTS PR00738 Glycosyl hydrolase family 20 signature 124 144 4.6E-40 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 Gene3D G3DSA:3.30.379.10 28 163 8.0E-22 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 SUPERFAMILY SSF55545 30 164 6.8E-30 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VV2_0591 b7393a5dae67f5d75dc35eccb1253c3b 823 Gene3D G3DSA:3.20.20.80 164 445 5.3E-90 T 14-10-2018 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 SUPERFAMILY SSF52413 321 422 2.75E-19 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 211 298 8.2E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 SMART SM00984 330 423 5.2E-15 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 422 3.7E-13 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 PIRSF PIRSF000124 4 421 1.9E-68 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 SUPERFAMILY SSF51735 5 203 7.06E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0779 84c84a76c9e8460cf9bda80024059191 423 Gene3D G3DSA:3.40.50.720 2 209 9.4E-65 T 14-10-2018 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 418 1.2E-113 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 SUPERFAMILY SSF48179 211 304 4.76E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 PIRSF PIRSF500136 1 423 8.7E-144 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 Gene3D G3DSA:3.40.50.720 210 423 1.5E-52 T 14-10-2018 VV1_0779 84c84a76c9e8460cf9bda80024059191 423 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 194 4.1E-57 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_1357 e9c7f49e5f29226beab216a28a6ad39e 180 SUPERFAMILY SSF110997 105 176 3.27E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV1_1357 e9c7f49e5f29226beab216a28a6ad39e 180 Pfam PF05036 Sporulation related domain 106 175 4.4E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VV1_1357 e9c7f49e5f29226beab216a28a6ad39e 180 Gene3D G3DSA:3.30.70.1070 99 178 2.5E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV1_0016 07fd2e9823ef1d732945acb6e6da62bd 194 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 32 179 3.5E-50 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria VV1_0016 07fd2e9823ef1d732945acb6e6da62bd 194 Pfam PF01694 Rhomboid family 42 180 3.7E-14 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VV1_0016 07fd2e9823ef1d732945acb6e6da62bd 194 SUPERFAMILY SSF144091 4 180 2.09E-30 T 14-10-2018 VV1_0016 07fd2e9823ef1d732945acb6e6da62bd 194 Gene3D G3DSA:1.20.1540.10 5 183 4.6E-22 T 14-10-2018 IPR035952 Rhomboid-like superfamily VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.420.10 578 699 4.6E-148 T 14-10-2018 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 SUPERFAMILY SSF48113 19 431 8.84E-153 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.1E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.1E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 1.1E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 1.1E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.1E-51 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.520.10 28 432 1.7E-218 T 14-10-2018 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.520.10 434 723 4.6E-148 T 14-10-2018 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 Gene3D G3DSA:1.10.420.20 191 397 1.7E-218 T 14-10-2018 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 Hamap MF_01961 Catalase-peroxidase [katG]. 7 723 40.025 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 SUPERFAMILY SSF48113 432 722 1.19E-112 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 Pfam PF00141 Peroxidase 77 398 1.7E-52 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_2755 58609828e0dd0b467572d8a5d4cfe9a2 723 Pfam PF00141 Peroxidase 405 698 5.1E-38 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 2.7E-102 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 70.41 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 PIRSF PIRSF036388 1 432 9.4E-223 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 Gene3D G3DSA:3.40.630.10 91 432 1.2E-105 T 14-10-2018 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 SUPERFAMILY SSF53187 104 428 1.32E-99 T 14-10-2018 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 8.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_0431 9cf4b0f8b09830897e6dee53630557c3 432 Pfam PF12404 Peptidase 5 81 1.0E-32 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 SUPERFAMILY SSF52218 86 233 1.58E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Gene3D G3DSA:3.40.50.360 78 240 5.8E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 SUPERFAMILY SSF63380 254 469 1.94E-60 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 20 623 49.958 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 168 178 7.0E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 136 147 7.0E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 192 211 7.0E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00369 Flavodoxin signature 88 101 7.0E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 28 623 4.1E-254 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Pfam PF00667 FAD binding domain 257 448 1.8E-26 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 SUPERFAMILY SSF52343 468 623 7.2E-52 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Gene3D G3DSA:1.20.990.10 304 408 5.1E-71 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Gene3D G3DSA:2.40.30.10 256 463 5.1E-71 T 14-10-2018 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Pfam PF00258 Flavodoxin 89 213 6.1E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 2.2E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PIRSF PIRSF000207 20 623 9.6E-270 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 Gene3D G3DSA:3.40.50.80 469 623 9.0E-60 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 2.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 2.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 2.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 2.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 2.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 2.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1402 b950fd6b2563cc6f99a9bd6b82110c4c 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 2.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_2643 c64f07440b51b0b449360ab182229558 666 Pfam PF08180 B melanoma antigen family 9 36 7.2E-13 T 14-10-2018 IPR012530 B melanoma antigen-like VV1_2643 c64f07440b51b0b449360ab182229558 666 SMART SM00245 326 527 8.5E-67 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VV1_2643 c64f07440b51b0b449360ab182229558 666 SUPERFAMILY SSF50156 217 337 2.23E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV1_2643 c64f07440b51b0b449360ab182229558 666 SUPERFAMILY SSF52096 165 532 2.82E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_2643 c64f07440b51b0b449360ab182229558 666 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 1.6E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_2643 c64f07440b51b0b449360ab182229558 666 Pfam PF03572 Peptidase family S41 356 525 1.5E-50 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VV1_2643 c64f07440b51b0b449360ab182229558 666 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 2.2E-112 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VV1_2643 c64f07440b51b0b449360ab182229558 666 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 8.6E-39 T 14-10-2018 IPR020992 Tail specific protease, C-terminal VV1_2643 c64f07440b51b0b449360ab182229558 666 Gene3D G3DSA:3.90.226.10 324 545 2.4E-57 T 14-10-2018 VV1_2643 c64f07440b51b0b449360ab182229558 666 SMART SM00228 246 323 3.4E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_2643 c64f07440b51b0b449360ab182229558 666 Gene3D G3DSA:2.30.42.10 236 320 4.2E-12 T 14-10-2018 VV2_0688 5976a957b6eb5cbada4477869b50dc71 345 Gene3D G3DSA:3.40.50.300 2 285 2.3E-79 T 14-10-2018 VV2_0688 5976a957b6eb5cbada4477869b50dc71 345 Pfam PF00005 ABC transporter 18 164 1.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0688 5976a957b6eb5cbada4477869b50dc71 345 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.7E-117 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 VV2_0688 5976a957b6eb5cbada4477869b50dc71 345 SUPERFAMILY SSF52540 3 245 5.45E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0688 5976a957b6eb5cbada4477869b50dc71 345 SMART SM00382 27 214 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0688 5976a957b6eb5cbada4477869b50dc71 345 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0688 5976a957b6eb5cbada4477869b50dc71 345 Pfam PF12857 TOBE-like domain 283 338 1.1E-6 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SUPERFAMILY SSF55073 481 637 4.0E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 634 5.4E-39 T 14-10-2018 IPR000160 GGDEF domain VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 Gene3D G3DSA:3.30.70.270 461 639 4.9E-46 T 14-10-2018 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SMART SM00267 465 639 7.2E-47 T 14-10-2018 IPR000160 GGDEF domain VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 Gene3D G3DSA:1.25.40.10 87 267 6.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SUPERFAMILY SSF48452 262 390 2.85E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 Gene3D G3DSA:1.25.40.10 273 384 1.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SUPERFAMILY SSF48452 112 236 1.75E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SMART SM00028 315 348 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SMART SM00028 153 186 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SMART SM00028 113 146 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SMART SM00028 275 308 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SMART SM00028 355 388 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 SMART SM00028 193 226 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2656 e412f6f73a657205f352c47b4c0d7ff8 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 472 638 1.6E-45 T 14-10-2018 IPR000160 GGDEF domain VV1_0234 67d540c5ab6f3009005fc7a9efaabe67 364 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 11 97 2.4E-26 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VV1_0234 67d540c5ab6f3009005fc7a9efaabe67 364 Gene3D G3DSA:2.40.10.410 278 364 2.0E-36 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily VV1_0234 67d540c5ab6f3009005fc7a9efaabe67 364 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 286 362 1.0E-27 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VV1_0234 67d540c5ab6f3009005fc7a9efaabe67 364 Gene3D G3DSA:3.40.50.10610 101 277 1.5E-54 T 14-10-2018 VV1_0234 67d540c5ab6f3009005fc7a9efaabe67 364 Gene3D G3DSA:3.30.1660.40 11 100 4.7E-35 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily VV1_0234 67d540c5ab6f3009005fc7a9efaabe67 364 Pfam PF16539 Flagellar assembly protein T, middle domain 102 243 6.8E-44 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain VV1_0671 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0671 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0671 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0671 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0671 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1530 24554988faa59291d2495091f3babc98 317 Gene3D G3DSA:3.40.50.20 1 129 2.1E-52 T 14-10-2018 VV1_1530 24554988faa59291d2495091f3babc98 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.903 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VV1_1530 24554988faa59291d2495091f3babc98 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 4.8E-140 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VV1_1530 24554988faa59291d2495091f3babc98 317 Gene3D G3DSA:3.30.1490.20 137 196 2.2E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_1530 24554988faa59291d2495091f3babc98 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 9.7E-80 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VV1_1530 24554988faa59291d2495091f3babc98 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.5E-48 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VV1_1530 24554988faa59291d2495091f3babc98 317 SUPERFAMILY SSF52440 2 122 9.49E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_1530 24554988faa59291d2495091f3babc98 317 Gene3D G3DSA:3.30.470.20 197 300 3.1E-40 T 14-10-2018 VV1_1530 24554988faa59291d2495091f3babc98 317 SUPERFAMILY SSF56059 123 313 1.7E-58 T 14-10-2018 VV2_1322 40dd1dbcebd91a33fa37408e8b14a2d6 218 Gene3D G3DSA:1.10.357.10 2 216 8.0E-59 T 14-10-2018 VV2_1322 40dd1dbcebd91a33fa37408e8b14a2d6 218 SUPERFAMILY SSF46689 7 85 7.7E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1322 40dd1dbcebd91a33fa37408e8b14a2d6 218 SUPERFAMILY SSF48498 91 207 6.04E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV2_1322 40dd1dbcebd91a33fa37408e8b14a2d6 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 3.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 Gene3D G3DSA:2.40.37.10 30 381 1.4E-124 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 Gene3D G3DSA:3.20.20.10 42 279 1.4E-124 T 14-10-2018 IPR029066 PLP-binding barrel VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 223 237 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 SUPERFAMILY SSF50621 260 387 1.4E-32 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 277 1.1E-50 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 5.9E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 366 5.9E-15 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 SUPERFAMILY SSF51419 41 279 1.08E-59 T 14-10-2018 IPR029066 PLP-binding barrel VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 1.1E-20 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 1.1E-20 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 1.1E-20 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 1.1E-20 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01182 Ornithine decarboxylase signature 353 366 1.1E-20 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 1.1E-20 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VV2_1030 a056c3907c2ff2746446d99c7ecbbd65 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 1.1E-20 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 355 366 6.3E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 419 435 6.3E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 334 350 6.3E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 298 318 6.3E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 Gene3D G3DSA:3.10.170.10 193 346 6.8E-36 T 14-10-2018 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 346 502 1.3E-40 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 SUPERFAMILY SSF55486 193 502 7.69E-75 T 14-10-2018 VV2_0032 188d5c340fe6a257b3add14fa600e764 608 Gene3D G3DSA:1.10.390.10 348 502 1.6E-48 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VV2_0032 188d5c340fe6a257b3add14fa600e764 608 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 194 343 2.1E-35 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF00005 ABC transporter 330 483 1.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 SUPERFAMILY SSF52540 3 253 3.74E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF00005 ABC transporter 24 181 9.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 Gene3D G3DSA:3.40.50.300 301 571 1.8E-86 T 14-10-2018 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 Gene3D G3DSA:3.40.50.300 1 287 5.5E-87 T 14-10-2018 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 565 0.0013 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.0E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 SMART SM00382 338 534 5.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 SMART SM00382 32 231 8.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 SUPERFAMILY SSF52540 304 553 2.24E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1085 a1898dc3948a2eb7c867d15d56357463 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR01032 Gene IV protein signature 538 566 1.8E-11 T 14-10-2018 VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR01032 Gene IV protein signature 591 613 1.8E-11 T 14-10-2018 VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR01032 Gene IV protein signature 470 493 1.8E-11 T 14-10-2018 VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 556 589 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF00263 Bacterial type II and III secretion system protein 449 611 6.9E-51 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 Gene3D G3DSA:3.30.1370.120 263 341 2.5E-16 T 14-10-2018 IPR038591 NolW-like superfamily VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 8.4E-9 T 14-10-2018 IPR005644 NolW-like VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 3.6E-14 T 14-10-2018 IPR005644 NolW-like VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 1.1E-16 T 14-10-2018 IPR005644 NolW-like VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 620 4.4E-157 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 6.0E-37 T 14-10-2018 IPR001775 GspD/PilQ family VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 593 6.0E-37 T 14-10-2018 IPR001775 GspD/PilQ family VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 598 612 6.0E-37 T 14-10-2018 IPR001775 GspD/PilQ family VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 469 6.0E-37 T 14-10-2018 IPR001775 GspD/PilQ family VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 490 6.0E-37 T 14-10-2018 IPR001775 GspD/PilQ family VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 Gene3D G3DSA:3.30.1370.120 22 185 7.9E-52 T 14-10-2018 IPR038591 NolW-like superfamily VV1_0877 0e0695a5632df5593e349d5e4445b3f9 673 Gene3D G3DSA:3.30.1370.120 188 258 5.8E-20 T 14-10-2018 IPR038591 NolW-like superfamily VV2_0733 36b41592146c2491c6723312e25a080e 292 Gene3D G3DSA:3.40.190.170 1 292 1.9E-114 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VV2_0733 36b41592146c2491c6723312e25a080e 292 PIRSF PIRSF006470 4 292 1.6E-75 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VV2_0733 36b41592146c2491c6723312e25a080e 292 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 3 279 1.3E-92 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VV2_0733 36b41592146c2491c6723312e25a080e 292 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 4 255 8.6E-77 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.4E-58 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 PIRSF PIRSF000149 1 333 1.3E-112 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 SUPERFAMILY SSF51735 1 180 1.53E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.7E-31 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 SMART SM00846 3 152 1.4E-65 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 Gene3D G3DSA:3.30.360.10 151 315 3.3E-124 T 14-10-2018 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 SUPERFAMILY SSF55347 152 314 8.04E-63 T 14-10-2018 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.8E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.8E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.8E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.8E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.8E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 Gene3D G3DSA:3.40.50.720 4 327 3.3E-124 T 14-10-2018 VV1_1141 497b8dcd193f3bd7147d090d12a73583 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.1E-118 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 Pfam PF00871 Acetokinase family 6 391 6.4E-141 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 SUPERFAMILY SSF53067 158 396 8.1E-79 T 14-10-2018 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 SUPERFAMILY SSF53067 5 196 9.06E-62 T 14-10-2018 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 167.986 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 3.6E-143 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 378 390 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 203 224 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 299 312 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 6 17 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 173 186 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 PRINTS PR00471 Acetate kinase family signature 321 337 8.9E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 Gene3D G3DSA:3.30.420.40 198 397 7.4E-72 T 14-10-2018 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 PIRSF PIRSF000722 2 397 5.8E-133 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV2_0148 2aced01b5f7e48c11877240b242bf648 397 Gene3D G3DSA:3.30.420.40 3 195 1.5E-65 T 14-10-2018 VV1_1816 addd8c5e13bae46b276090404bf15418 466 Pfam PF07690 Major Facilitator Superfamily 24 396 3.0E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_1816 addd8c5e13bae46b276090404bf15418 466 Gene3D G3DSA:1.20.1250.20 248 440 3.3E-9 T 14-10-2018 VV1_1816 addd8c5e13bae46b276090404bf15418 466 SUPERFAMILY SSF103473 9 438 2.22E-39 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_1816 addd8c5e13bae46b276090404bf15418 466 Gene3D G3DSA:1.20.1250.20 12 223 4.7E-12 T 14-10-2018 VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 Gene3D G3DSA:3.30.300.160 1 78 2.2E-39 T 14-10-2018 VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 SUPERFAMILY SSF52540 106 496 1.4E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 SMART SM00382 252 375 2.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 319 333 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 SUPERFAMILY SSF160246 12 78 9.68E-17 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 Pfam PF00437 Type II/IV secretion system protein 126 391 4.4E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 496 7.9E-229 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 Gene3D G3DSA:3.40.50.300 226 499 6.1E-132 T 14-10-2018 VV1_0876 cd86bc3e540f2cb073112140066c62fd 499 Gene3D G3DSA:3.30.450.90 89 224 4.5E-54 T 14-10-2018 VV2_0698 5a15b91d407294e88f91c40b35025c8b 554 Gene3D G3DSA:2.30.40.10 60 117 7.4E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0698 5a15b91d407294e88f91c40b35025c8b 554 SUPERFAMILY SSF51556 114 477 6.6E-36 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV2_0698 5a15b91d407294e88f91c40b35025c8b 554 SUPERFAMILY SSF51338 54 539 2.65E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0698 5a15b91d407294e88f91c40b35025c8b 554 Pfam PF07969 Amidohydrolase family 102 532 3.4E-24 T 14-10-2018 IPR013108 Amidohydrolase 3 VV1_2551 552c06cf39e4f02afd49a436dfe8cc0b 283 SUPERFAMILY SSF53098 117 281 3.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2551 552c06cf39e4f02afd49a436dfe8cc0b 283 Pfam PF00665 Integrase core domain 125 237 1.0E-28 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_2551 552c06cf39e4f02afd49a436dfe8cc0b 283 Gene3D G3DSA:3.30.420.10 122 279 3.8E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_1590 dafbb5660dcbab61da9080a9d78274f5 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 156 3.6E-48 T 14-10-2018 IPR008136 CinA, C-terminal VV1_1590 dafbb5660dcbab61da9080a9d78274f5 167 Pfam PF02464 Competence-damaged protein 6 158 3.5E-56 T 14-10-2018 IPR008136 CinA, C-terminal VV1_1590 dafbb5660dcbab61da9080a9d78274f5 167 SUPERFAMILY SSF142433 3 160 3.53E-55 T 14-10-2018 IPR036653 CinA-like, C-terminal VV1_1590 dafbb5660dcbab61da9080a9d78274f5 167 Gene3D G3DSA:3.90.950.20 1 162 6.3E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal VV1_0192 6bd4f0b8936aebe2714e373f7aa42bbd 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 8.1E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VV2_0012 15e3edf8d431a2dc78b447f68e582f42 407 Pfam PF02754 Cysteine-rich domain 175 260 3.7E-16 T 14-10-2018 IPR004017 Cysteine-rich domain VV2_0012 15e3edf8d431a2dc78b447f68e582f42 407 Pfam PF02754 Cysteine-rich domain 304 387 7.6E-12 T 14-10-2018 IPR004017 Cysteine-rich domain VV2_0012 15e3edf8d431a2dc78b447f68e582f42 407 Gene3D G3DSA:1.10.1060.10 2 97 6.1E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_0012 15e3edf8d431a2dc78b447f68e582f42 407 Pfam PF13183 4Fe-4S dicluster domain 15 79 1.1E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_0012 15e3edf8d431a2dc78b447f68e582f42 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV2_0012 15e3edf8d431a2dc78b447f68e582f42 407 SUPERFAMILY SSF46548 15 92 1.33E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_0012 15e3edf8d431a2dc78b447f68e582f42 407 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 406 5.5E-219 T 14-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 VV2_0662 26372e979d5c6536e87dec61832ffb6e 65 PRINTS PR00281 Hok/Gef cell toxic protein family signature 41 63 5.9E-8 T 14-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VV2_0662 26372e979d5c6536e87dec61832ffb6e 65 PRINTS PR00281 Hok/Gef cell toxic protein family signature 21 39 5.9E-8 T 14-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VV2_0662 26372e979d5c6536e87dec61832ffb6e 65 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 17 65 2.0E-21 T 14-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VV2_0662 26372e979d5c6536e87dec61832ffb6e 65 Pfam PF01848 Hok/gef family 22 62 5.2E-10 T 14-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 234 7.6E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 Gene3D G3DSA:3.30.70.270 286 454 6.0E-40 T 14-10-2018 VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 SMART SM00062 31 248 3.6E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 SMART SM00267 289 453 9.0E-44 T 14-10-2018 IPR000160 GGDEF domain VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 Gene3D G3DSA:3.40.190.10 28 248 1.9E-34 T 14-10-2018 VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 SUPERFAMILY SSF53850 2 236 2.35E-36 T 14-10-2018 VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 301 449 1.3E-33 T 14-10-2018 IPR000160 GGDEF domain VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 452 6.9E-33 T 14-10-2018 IPR000160 GGDEF domain VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 Gene3D G3DSA:3.40.190.10 116 212 1.9E-34 T 14-10-2018 VV2_0516 659be0bb9c2d9c00dd2bfb9882854253 457 SUPERFAMILY SSF55073 305 452 9.42E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2589 fc393701b0c5ad2fef36bc515c99aa2e 66 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 66 2.5E-28 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VV1_2589 fc393701b0c5ad2fef36bc515c99aa2e 66 PIRSF PIRSF036704 1 66 5.0E-35 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VV1_2589 fc393701b0c5ad2fef36bc515c99aa2e 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 38 5.3E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 Gene3D G3DSA:3.90.110.10 171 439 1.1E-97 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 3.9E-60 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 Gene3D G3DSA:3.40.50.720 1 170 1.6E-65 T 14-10-2018 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 4.3E-48 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 SUPERFAMILY SSF51735 5 170 3.2E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 3.7E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_1485 5d66f111fe56b3258d5d7a34279a206a 440 SUPERFAMILY SSF56327 173 436 1.62E-91 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV1_1137 30f13739dc7472ee98697629bc75eed1 332 Gene3D G3DSA:3.40.50.1820 26 329 3.6E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_1137 30f13739dc7472ee98697629bc75eed1 332 SUPERFAMILY SSF53474 35 324 2.34E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_1137 30f13739dc7472ee98697629bc75eed1 332 Pfam PF12146 Serine aminopeptidase, S33 53 310 4.9E-58 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 197 9.3E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.40.50.300 5 202 2.2E-68 T 14-10-2018 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.870 310 594 1.4E-129 T 14-10-2018 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF52540 5 211 1.06E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF50447 155 303 1.04E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 402 516 1.39E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.30.10 203 303 4.9E-35 T 14-10-2018 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:3.30.70.240 393 486 1.4E-129 T 14-10-2018 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 1.1E-295 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF00679 Elongation factor G C-terminus 399 480 7.0E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Gene3D G3DSA:2.40.50.250 487 603 1.4E-129 T 14-10-2018 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.1E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 SUPERFAMILY SSF54980 306 391 3.35E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_0888 fdc7b275982ad846a937d4ddd3f1a9f6 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.4E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VV1_0291 a4656ea3d3af869eca5f5612743b38fe 188 PIRSF PIRSF004682 1 186 5.7E-64 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VV1_0291 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 155 3.3E-37 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VV1_0291 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 3.7E-81 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VV1_0291 a4656ea3d3af869eca5f5612743b38fe 188 Pfam PF13242 HAD-hyrolase-like 107 176 5.5E-13 T 14-10-2018 VV1_0291 a4656ea3d3af869eca5f5612743b38fe 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 3.3E-39 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VV1_0291 a4656ea3d3af869eca5f5612743b38fe 188 Gene3D G3DSA:3.40.50.1000 2 187 2.7E-60 T 14-10-2018 IPR023214 HAD superfamily VV1_0291 a4656ea3d3af869eca5f5612743b38fe 188 SUPERFAMILY SSF56784 4 181 5.75E-48 T 14-10-2018 IPR036412 HAD-like superfamily VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 56 306 6.7E-80 T 14-10-2018 VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF47413 1 59 2.44E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.6E-40 T 14-10-2018 VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:3.40.50.2300 160 289 6.7E-80 T 14-10-2018 VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 SMART SM00354 1 71 8.8E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 SUPERFAMILY SSF53822 60 332 3.53E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_1358 22d8e0e040d6e3f97273b0fda12770a9 335 Gene3D G3DSA:1.10.260.40 1 55 3.5E-26 T 14-10-2018 VV1_0843 1d9d1c64c5bf53abc8d5d809f46224e7 270 PIRSF PIRSF028069 20 270 3.4E-93 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VV1_0843 1d9d1c64c5bf53abc8d5d809f46224e7 270 Pfam PF11932 Protein of unknown function (DUF3450) 28 265 1.7E-89 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VV1_1568 f028a40c7add705a3467e67e88a709a1 243 SUPERFAMILY SSF63892 4 241 2.09E-101 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VV1_1568 f028a40c7add705a3467e67e88a709a1 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.521 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VV1_1568 f028a40c7add705a3467e67e88a709a1 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 2.3E-98 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VV1_1568 f028a40c7add705a3467e67e88a709a1 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.7E-105 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VV1_1568 f028a40c7add705a3467e67e88a709a1 243 Gene3D G3DSA:3.20.20.70 1 243 8.9E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1351 074a2750e83b78f304fb6e86475d921a 259 Pfam PF00381 PTS HPr component phosphorylation site 12 85 1.8E-4 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV2_1351 074a2750e83b78f304fb6e86475d921a 259 SUPERFAMILY SSF55594 9 89 1.7E-12 T 14-10-2018 IPR035895 HPr-like superfamily VV2_1351 074a2750e83b78f304fb6e86475d921a 259 PIRSF PIRSF029195 1 259 2.7E-178 T 14-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VV2_1351 074a2750e83b78f304fb6e86475d921a 259 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 129 252 1.6E-21 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_1351 074a2750e83b78f304fb6e86475d921a 259 SUPERFAMILY SSF55804 129 250 4.58E-18 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1351 074a2750e83b78f304fb6e86475d921a 259 Gene3D G3DSA:3.40.930.10 106 252 7.4E-17 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1351 074a2750e83b78f304fb6e86475d921a 259 Gene3D G3DSA:3.30.1340.10 2 90 8.0E-7 T 14-10-2018 IPR035895 HPr-like superfamily VV1_2262 94c3375c5df970cbbeb9cb0692069502 208 Gene3D G3DSA:3.90.79.10 23 203 2.7E-48 T 14-10-2018 VV1_2262 94c3375c5df970cbbeb9cb0692069502 208 SUPERFAMILY SSF55811 42 197 6.23E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_2262 94c3375c5df970cbbeb9cb0692069502 208 Pfam PF00293 NUDIX domain 45 162 3.7E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 5.3E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 Gene3D G3DSA:1.10.10.160 108 181 3.5E-99 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.768 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 Gene3D G3DSA:3.40.50.300 4 266 3.5E-99 T 14-10-2018 VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 Gene3D G3DSA:3.40.50.300 274 634 1.1E-124 T 14-10-2018 VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 Gene3D G3DSA:1.10.486.10 377 546 1.1E-124 T 14-10-2018 VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 SUPERFAMILY SSF52540 1 640 6.77E-163 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1082 05551c09fbd184cd11ef2d3394193a18 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.6E-73 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VV1_0343 30f4665dc75a6a0c0cfa25efb3624eb9 294 Pfam PF03466 LysR substrate binding domain 90 290 2.8E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0343 30f4665dc75a6a0c0cfa25efb3624eb9 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 65 8.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0343 30f4665dc75a6a0c0cfa25efb3624eb9 294 Gene3D G3DSA:1.10.10.10 5 93 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0343 30f4665dc75a6a0c0cfa25efb3624eb9 294 SUPERFAMILY SSF53850 91 291 7.06E-47 T 14-10-2018 VV1_0343 30f4665dc75a6a0c0cfa25efb3624eb9 294 SUPERFAMILY SSF46785 6 114 4.48E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0343 30f4665dc75a6a0c0cfa25efb3624eb9 294 Gene3D G3DSA:3.40.190.290 94 290 1.8E-67 T 14-10-2018 VV2_0073 9408140c5b2f743800c92ce5993ff6bb 306 Pfam PF11563 Protoglobin 13 161 1.6E-30 T 14-10-2018 VV2_0073 9408140c5b2f743800c92ce5993ff6bb 306 Gene3D G3DSA:3.30.750.24 175 293 7.3E-36 T 14-10-2018 IPR036513 STAS domain superfamily VV2_0073 9408140c5b2f743800c92ce5993ff6bb 306 Pfam PF01740 STAS domain 186 285 1.6E-10 T 14-10-2018 IPR002645 STAS domain VV2_0073 9408140c5b2f743800c92ce5993ff6bb 306 SUPERFAMILY SSF52091 177 289 7.26E-19 T 14-10-2018 IPR036513 STAS domain superfamily VV2_0073 9408140c5b2f743800c92ce5993ff6bb 306 Gene3D G3DSA:1.10.490.10 11 165 1.8E-35 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VV2_0073 9408140c5b2f743800c92ce5993ff6bb 306 SUPERFAMILY SSF46458 12 156 1.26E-36 T 14-10-2018 IPR009050 Globin-like superfamily VV1_2676 8a7ed303985c848d8bf4b37943095711 130 SUPERFAMILY SSF52540 5 130 1.17E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2676 8a7ed303985c848d8bf4b37943095711 130 Gene3D G3DSA:3.40.50.300 5 130 1.5E-30 T 14-10-2018 VV1_2676 8a7ed303985c848d8bf4b37943095711 130 Pfam PF13671 AAA domain 7 107 4.6E-21 T 14-10-2018 VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 SUPERFAMILY SSF141868 434 674 1.29E-64 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 Gene3D G3DSA:3.10.580.10 696 831 1.0E-9 T 14-10-2018 VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 SMART SM00052 428 675 4.7E-69 T 14-10-2018 IPR001633 EAL domain VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 Gene3D G3DSA:3.30.70.270 264 419 6.0E-6 T 14-10-2018 VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 Pfam PF00563 EAL domain 438 670 2.4E-59 T 14-10-2018 IPR001633 EAL domain VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 Gene3D G3DSA:3.30.450.20 133 251 3.1E-19 T 14-10-2018 VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 SUPERFAMILY SSF55785 138 250 1.06E-17 T 14-10-2018 IPR035965 PAS domain superfamily VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 SUPERFAMILY SSF54631 699 829 1.77E-12 T 14-10-2018 VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 Gene3D G3DSA:3.20.20.450 420 677 3.9E-68 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 Pfam PF13426 PAS domain 152 251 4.2E-8 T 14-10-2018 IPR000014 PAS domain VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 253 2.1E-12 T 14-10-2018 IPR000014 PAS domain VV1_2213 67598f90ab4282c8270d415943fa3ce6 832 SMART SM00091 141 207 1.8E-7 T 14-10-2018 IPR000014 PAS domain VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 7.2E-35 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.2E-35 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 7.2E-35 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.2E-35 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.2E-35 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 7.2E-35 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 3.9E-55 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 6.7E-6 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 6.7E-6 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 SUPERFAMILY SSF52317 3 191 2.13E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 Gene3D G3DSA:3.40.50.880 2 191 6.8E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 8.2E-14 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 8.2E-14 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 8.2E-14 T 14-10-2018 VV1_3065 de91f5f358b92d79ddaa73c8de4e4d17 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 7.3E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 SUPERFAMILY SSF46894 150 213 1.77E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 4.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 4.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 4.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 4.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 Gene3D G3DSA:1.10.10.10 146 220 2.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 SMART SM00421 153 210 1.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 Gene3D G3DSA:3.40.50.2300 5 145 1.5E-36 T 14-10-2018 VV2_1569 a757832c6cd866d5502d3f0f3da98054 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2384 ad66b67a5dfde7b4a7973f184b73f11e 229 Pfam PF11813 Protein of unknown function (DUF3334) 4 229 5.6E-116 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 VV1_2384 ad66b67a5dfde7b4a7973f184b73f11e 229 SUPERFAMILY SSF103039 10 173 2.09E-24 T 14-10-2018 IPR028976 CheC-like superfamily VV1_2384 ad66b67a5dfde7b4a7973f184b73f11e 229 Gene3D G3DSA:3.40.1550.10 8 173 4.3E-20 T 14-10-2018 IPR028976 CheC-like superfamily VV1_1112 489c92cee3ef7338651d2acc274ee008 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.377 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VV1_1112 489c92cee3ef7338651d2acc274ee008 259 Gene3D G3DSA:3.40.50.150 57 259 1.2E-73 T 14-10-2018 VV1_1112 489c92cee3ef7338651d2acc274ee008 259 Gene3D G3DSA:3.40.1630.10 1 56 5.5E-20 T 14-10-2018 VV1_1112 489c92cee3ef7338651d2acc274ee008 259 SUPERFAMILY SSF53335 5 254 3.38E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1112 489c92cee3ef7338651d2acc274ee008 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 6.2E-105 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VV1_2569 2f952a45c51f21c9ed186d381459bca5 251 Pfam PF03942 DTW domain 30 221 5.4E-40 T 14-10-2018 IPR005636 DTW VV1_2569 2f952a45c51f21c9ed186d381459bca5 251 SMART SM01144 27 227 3.7E-62 T 14-10-2018 IPR005636 DTW VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 SUPERFAMILY SSF53671 4 306 1.57E-101 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.5E-115 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.5E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.4E-37 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.5E-32 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 8 304 5.1E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Gene3D G3DSA:3.40.50.1370 135 292 5.1E-121 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.6E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1465 035c0f4abb63dfff2c2ec8e6dfc3715d 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.569 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV2_0265 b88343b865b81f7360a61f8f47572be7 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 2.0E-32 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV2_0265 b88343b865b81f7360a61f8f47572be7 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 53.189 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV2_0265 b88343b865b81f7360a61f8f47572be7 400 Gene3D G3DSA:3.40.50.720 1 398 5.7E-161 T 14-10-2018 VV2_0265 b88343b865b81f7360a61f8f47572be7 400 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 1.7E-24 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV2_0265 b88343b865b81f7360a61f8f47572be7 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 320 5.2E-95 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV2_0265 b88343b865b81f7360a61f8f47572be7 400 SUPERFAMILY SSF51735 42 148 4.84E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 Gene3D G3DSA:3.40.50.1000 5 218 2.4E-61 T 14-10-2018 IPR023214 HAD superfamily VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 SUPERFAMILY SSF56784 2 222 4.58E-50 T 14-10-2018 IPR036412 HAD-like superfamily VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 4.3E-80 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 195 7.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 194 2.7E-21 T 14-10-2018 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.1E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.5E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1655 56d1d9da8112cfaca4ae4e239a8b89fe 224 Gene3D G3DSA:1.10.150.240 16 95 2.4E-61 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 Gene3D G3DSA:1.10.287.470 107 191 6.6E-18 T 14-10-2018 VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 SUPERFAMILY SSF111369 38 107 1.7E-7 T 14-10-2018 VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 Pfam PF13437 HlyD family secretion protein 207 282 2.6E-6 T 14-10-2018 VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 Gene3D G3DSA:2.40.30.170 237 319 6.6E-18 T 14-10-2018 VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 Gene3D G3DSA:1.10.287.470 77 105 3.3E-10 T 14-10-2018 VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 Pfam PF13533 Biotin-lipoyl like 45 89 5.2E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 Gene3D G3DSA:2.40.50.100 192 236 6.6E-18 T 14-10-2018 VV1_2689 04ffcc3e2f4ea5850b58752cc17c6e16 324 Gene3D G3DSA:2.40.50.100 42 76 3.3E-10 T 14-10-2018 VV1_0070 8161df82d90995e9cfe8dfaf93adf468 79 Gene3D G3DSA:2.30.130.30 1 72 2.7E-25 T 14-10-2018 VV1_0070 8161df82d90995e9cfe8dfaf93adf468 79 SMART SM01022 6 74 2.8E-10 T 14-10-2018 IPR007374 ASCH domain VV1_0070 8161df82d90995e9cfe8dfaf93adf468 79 SUPERFAMILY SSF88697 1 71 3.48E-14 T 14-10-2018 IPR015947 PUA-like superfamily VV1_0070 8161df82d90995e9cfe8dfaf93adf468 79 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 4 70 2.4E-20 T 14-10-2018 IPR039440 Domain of unknown function DUF3850 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 Gene3D G3DSA:1.20.120.140 93 390 8.8E-118 T 14-10-2018 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 SUPERFAMILY SSF52540 189 392 3.02E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 119 392 65.184 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 Pfam PF00448 SRP54-type protein, GTPase domain 192 391 4.5E-78 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 SMART SM00382 190 370 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 119 391 3.2E-116 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 Gene3D G3DSA:3.40.50.300 187 380 8.8E-118 T 14-10-2018 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 SUPERFAMILY SSF47364 91 170 1.07E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 SMART SM00962 191 392 1.1E-124 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 365 378 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 SMART SM00963 96 176 2.0E-26 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1154 d1c79327c385b0028a0f35a5a9aae25a 395 Pfam PF02881 SRP54-type protein, helical bundle domain 111 172 7.6E-14 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 SUPERFAMILY SSF51556 1 253 2.2E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.8E-92 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 PIRSF PIRSF005902 1 255 2.4E-82 T 14-10-2018 IPR001130 TatD family GO:0016788 VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 Gene3D G3DSA:3.20.20.140 1 255 9.9E-100 T 14-10-2018 VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 Pfam PF01026 TatD related DNase 3 253 2.9E-78 T 14-10-2018 IPR001130 TatD family GO:0016788 VV1_3000 cc93b9e401a7a4b4e91af6bb5441bf7e 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV1_3123 e4cecda0e96b7252f4d69af8215b7934 220 Gene3D G3DSA:3.30.70.1450 141 216 7.7E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_3123 e4cecda0e96b7252f4d69af8215b7934 220 SUPERFAMILY SSF51735 6 136 4.31E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_3123 e4cecda0e96b7252f4d69af8215b7934 220 SUPERFAMILY SSF116726 134 215 3.79E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_3123 e4cecda0e96b7252f4d69af8215b7934 220 Pfam PF02080 TrkA-C domain 154 214 1.0E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV1_3123 e4cecda0e96b7252f4d69af8215b7934 220 Pfam PF02254 TrkA-N domain 8 123 4.2E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV1_3123 e4cecda0e96b7252f4d69af8215b7934 220 Gene3D G3DSA:3.40.50.720 2 140 4.3E-34 T 14-10-2018 VV1_2054 77932c6577706bb6ae5e7942b081708d 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 5.2E-32 T 14-10-2018 IPR022548 Domain of unknown function DUF2846 VV1_2054 77932c6577706bb6ae5e7942b081708d 154 PIRSF PIRSF012335 1 154 3.4E-73 T 14-10-2018 IPR016596 Protein of unknown function UCP012335 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 SUPERFAMILY SSF58104 313 620 3.79E-74 T 14-10-2018 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 588 2.1E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 Gene3D G3DSA:3.30.450.20 49 265 1.6E-78 T 14-10-2018 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 SUPERFAMILY SSF103190 87 183 3.92E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 Pfam PF00672 HAMP domain 291 342 9.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 Pfam PF02743 Cache domain 34 254 8.8E-32 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 Gene3D G3DSA:1.10.287.950 290 622 5.8E-70 T 14-10-2018 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 SMART SM00283 360 621 2.2E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 SMART SM00304 373 440 89.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 SMART SM00304 291 345 5.7E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1623 701b090d4e5afc7be65b59a1f23ca931 622 Gene3D G3DSA:3.30.450.20 62 172 1.6E-78 T 14-10-2018 VV1_2783 7a4632c60750900910edb94d21deefba 342 Gene3D G3DSA:3.40.630.10 1 342 8.5E-122 T 14-10-2018 VV1_2783 7a4632c60750900910edb94d21deefba 342 PIRSF PIRSF017020 4 336 7.7E-124 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VV1_2783 7a4632c60750900910edb94d21deefba 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 3.6E-74 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VV1_2783 7a4632c60750900910edb94d21deefba 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 134.541 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VV1_2783 7a4632c60750900910edb94d21deefba 342 SUPERFAMILY SSF53187 9 329 1.44E-75 T 14-10-2018 VV1_2295 5c67e857ee0b14b644a2e2ad5aa7f172 380 Gene3D G3DSA:3.30.450.40 1 157 6.6E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_2295 5c67e857ee0b14b644a2e2ad5aa7f172 380 SUPERFAMILY SSF109604 183 359 9.42E-23 T 14-10-2018 VV1_2295 5c67e857ee0b14b644a2e2ad5aa7f172 380 Pfam PF13487 HD domain 241 310 1.1E-13 T 14-10-2018 VV1_2295 5c67e857ee0b14b644a2e2ad5aa7f172 380 Gene3D G3DSA:1.10.3210.10 161 374 2.0E-48 T 14-10-2018 VV1_2295 5c67e857ee0b14b644a2e2ad5aa7f172 380 SUPERFAMILY SSF55781 36 152 4.14E-10 T 14-10-2018 VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 9.8E-180 T 14-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.142 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 Gene3D G3DSA:2.160.10.10 172 343 5.0E-70 T 14-10-2018 VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.7E-16 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 Gene3D G3DSA:3.30.70.2010 1 130 2.9E-38 T 14-10-2018 VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 Gene3D G3DSA:3.30.60.70 131 171 1.9E-20 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VV1_1790 ec9aaf56b350a183a3e0d864cbbbeb92 343 SUPERFAMILY SSF51161 90 323 6.24E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 SUPERFAMILY SSF46785 1 79 2.66E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:3.40.190.10 165 265 1.2E-28 T 14-10-2018 VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 SUPERFAMILY SSF53850 88 290 8.28E-32 T 14-10-2018 VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Pfam PF03466 LysR substrate binding domain 88 289 2.0E-34 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:3.40.190.10 91 285 1.2E-28 T 14-10-2018 VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1076 b3f7411d9df3cc46cecf5bd59fdefc1c 296 Gene3D G3DSA:1.10.10.10 1 90 8.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00388 239 304 8.2E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:3.40.50.2300 471 617 3.6E-40 T 14-10-2018 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 6.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:3.30.565.10 306 470 2.5E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF47226 640 753 2.36E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:1.20.120.160 636 751 1.1E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF52172 487 610 7.97E-37 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF158472 175 221 1.12E-5 T 14-10-2018 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 6.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00387 351 466 2.2E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00304 172 224 2.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF01627 Hpt domain 665 747 1.9E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SMART SM00448 490 605 2.7E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 463 7.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Pfam PF00072 Response regulator receiver domain 492 605 2.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:1.20.1480.50 136 227 2.8E-9 T 14-10-2018 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF47384 223 304 3.34E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 SUPERFAMILY SSF55874 293 462 9.82E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2663 f69caa3bc1b071642321d198dbf3b069 762 Gene3D G3DSA:1.10.287.130 228 305 6.3E-21 T 14-10-2018 VV2_1433 93dace663f0885bacbc777be4ca629f9 279 SUPERFAMILY SSF53613 12 272 1.39E-81 T 14-10-2018 IPR029056 Ribokinase-like VV2_1433 93dace663f0885bacbc777be4ca629f9 279 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 271 3.4E-100 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VV2_1433 93dace663f0885bacbc777be4ca629f9 279 Pfam PF08543 Phosphomethylpyrimidine kinase 21 269 7.0E-97 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VV2_1433 93dace663f0885bacbc777be4ca629f9 279 Gene3D G3DSA:3.40.1190.20 2 278 4.8E-103 T 14-10-2018 IPR029056 Ribokinase-like VV1_0141 b2e72a33293e52969548be5319a223fc 639 SUPERFAMILY SSF52540 41 600 3.35E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0141 b2e72a33293e52969548be5319a223fc 639 SMART SM00491 477 606 1.4E-45 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV1_0141 b2e72a33293e52969548be5319a223fc 639 Gene3D G3DSA:3.40.50.300 19 287 1.3E-50 T 14-10-2018 VV1_0141 b2e72a33293e52969548be5319a223fc 639 SMART SM00487 17 310 0.007 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_0141 b2e72a33293e52969548be5319a223fc 639 Pfam PF13307 Helicase C-terminal domain 462 619 4.7E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV1_0141 b2e72a33293e52969548be5319a223fc 639 Gene3D G3DSA:3.40.50.300 445 636 4.0E-37 T 14-10-2018 VV1_0141 b2e72a33293e52969548be5319a223fc 639 Pfam PF04851 Type III restriction enzyme, res subunit 19 251 7.8E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV1_0141 b2e72a33293e52969548be5319a223fc 639 SUPERFAMILY SSF52540 14 237 5.32E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 SMART SM00490 253 334 4.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Pfam PF09382 RQC domain 409 517 8.6E-37 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 SMART SM00956 414 517 3.0E-50 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 2.0E-253 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 SUPERFAMILY SSF47819 534 608 5.23E-26 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 SUPERFAMILY SSF52540 18 203 8.59E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Gene3D G3DSA:1.10.10.10 409 519 1.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 SMART SM00341 533 611 2.9E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 SMART SM00487 25 221 4.5E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 5.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Gene3D G3DSA:3.40.50.300 8 211 9.3E-82 T 14-10-2018 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Pfam PF00270 DEAD/DEAH box helicase 32 190 4.9E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Gene3D G3DSA:3.40.50.300 213 408 2.8E-60 T 14-10-2018 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.7E-189 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Gene3D G3DSA:1.10.150.80 526 609 4.7E-28 T 14-10-2018 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Pfam PF00570 HRDC domain 537 603 1.3E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 SUPERFAMILY SSF52540 211 458 1.3E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0943 3f12cf7e17b7f0b9da707bc1bf0c5339 611 Pfam PF16124 RecQ zinc-binding 346 407 8.7E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF109604 37 205 1.35E-41 T 14-10-2018 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Gene3D G3DSA:3.30.70.260 662 741 6.0E-15 T 14-10-2018 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF02824 TGS domain 403 462 1.7E-21 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Gene3D G3DSA:1.10.3210.10 42 205 2.2E-34 T 14-10-2018 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 SMART SM00954 250 360 3.2E-64 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF81271 396 462 1.07E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Gene3D G3DSA:3.30.460.10 208 340 1.0E-49 T 14-10-2018 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF13291 ACT domain 663 739 6.5E-14 T 14-10-2018 IPR002912 ACT domain VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF13328 HD domain 52 190 4.3E-35 T 14-10-2018 IPR003607 HD/PDEase domain VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.8E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 Gene3D G3DSA:3.10.20.30 397 470 6.4E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF81301 195 407 1.41E-62 T 14-10-2018 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 2.5E-184 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 VV1_1575 a35a354615fcaeeffe503edd3b9b1b2e 741 SUPERFAMILY SSF55021 664 739 3.57E-9 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 Gene3D G3DSA:3.90.700.10 237 363 7.2E-163 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 Gene3D G3DSA:3.50.50.60 7 409 7.2E-163 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.0E-9 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-9 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 4.2E-38 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 SUPERFAMILY SSF46977 444 582 2.35E-43 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 SUPERFAMILY SSF51905 3 439 2.74E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 582 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-5 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.5E-5 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 Pfam PF00890 FAD binding domain 7 397 2.9E-114 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 PIRSF PIRSF000171 1 575 1.2E-45 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 Gene3D G3DSA:1.20.58.100 424 538 3.2E-35 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 SUPERFAMILY SSF56425 227 358 3.74E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 Gene3D G3DSA:4.10.80.40 543 577 2.6E-15 T 14-10-2018 VV1_1269 cdb6a90a85856991c11310934cbe3ffa 605 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.1E-236 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV2_1198 f2a494f0e15323902d094490bab5f274 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 24.042 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VV2_1198 f2a494f0e15323902d094490bab5f274 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 407 2.8E-137 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VV2_1198 f2a494f0e15323902d094490bab5f274 408 Pfam PF03616 Sodium/glutamate symporter 10 376 8.3E-148 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VV2_1287 38559791df151666776a7d0eba6eafaf 449 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VV2_1287 38559791df151666776a7d0eba6eafaf 449 SUPERFAMILY SSF51445 16 441 3.14E-157 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1287 38559791df151666776a7d0eba6eafaf 449 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 437 5.3E-188 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 VV2_1287 38559791df151666776a7d0eba6eafaf 449 Pfam PF00232 Glycosyl hydrolase family 1 15 440 2.3E-150 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VV2_1287 38559791df151666776a7d0eba6eafaf 449 Gene3D G3DSA:3.20.20.80 9 446 3.7E-163 T 14-10-2018 VV2_1287 38559791df151666776a7d0eba6eafaf 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VV2_1287 38559791df151666776a7d0eba6eafaf 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VV2_1287 38559791df151666776a7d0eba6eafaf 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VV2_1287 38559791df151666776a7d0eba6eafaf 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VV2_1287 38559791df151666776a7d0eba6eafaf 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 4.6E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VV2_1287 38559791df151666776a7d0eba6eafaf 449 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site VV1_1665 9dac352582b3029979687cb98ae96976 801 Pfam PF06165 Glycosyltransferase family 36 21 267 8.5E-84 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 VV1_1665 9dac352582b3029979687cb98ae96976 801 Gene3D G3DSA:2.70.98.40 1 302 1.2E-113 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VV1_1665 9dac352582b3029979687cb98ae96976 801 SMART SM01068 1 63 9.9E-19 T 14-10-2018 IPR009342 Putative carbohydrate binding domain VV1_1665 9dac352582b3029979687cb98ae96976 801 SUPERFAMILY SSF48208 273 800 4.21E-110 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VV1_1665 9dac352582b3029979687cb98ae96976 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.6E-208 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VV1_1665 9dac352582b3029979687cb98ae96976 801 Gene3D G3DSA:2.60.420.10 723 801 9.2E-32 T 14-10-2018 VV1_1665 9dac352582b3029979687cb98ae96976 801 SUPERFAMILY SSF74650 1 269 1.44E-79 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VV1_1665 9dac352582b3029979687cb98ae96976 801 Gene3D G3DSA:1.50.10.10 311 722 1.5E-130 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VV1_0960 70191408e10f5144b78f270d408fc114 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 5.0E-112 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VV1_0960 70191408e10f5144b78f270d408fc114 257 Gene3D G3DSA:3.20.20.70 1 253 2.6E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0960 70191408e10f5144b78f270d408fc114 257 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.256 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VV1_0960 70191408e10f5144b78f270d408fc114 257 SUPERFAMILY SSF110399 1 236 4.58E-87 T 14-10-2018 VV1_0493 f9a912053d0e710cbf6f6d74c50abe95 334 Pfam PF01551 Peptidase family M23 172 267 6.1E-30 T 14-10-2018 IPR016047 Peptidase M23 VV1_0493 f9a912053d0e710cbf6f6d74c50abe95 334 Gene3D G3DSA:2.70.70.10 119 273 1.7E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_0493 f9a912053d0e710cbf6f6d74c50abe95 334 SUPERFAMILY SSF51261 42 268 4.19E-54 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1697 b0efab3a0c141ef5c730bf3bb9c8cfba 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 5.2E-35 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VV1_1697 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Gene3D G3DSA:3.30.300.20 1 106 8.8E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV1_1697 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.226 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VV1_1697 b0efab3a0c141ef5c730bf3bb9c8cfba 131 SUPERFAMILY SSF89919 2 105 1.31E-31 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VV1_1697 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 3.0E-47 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VV1_1697 b0efab3a0c141ef5c730bf3bb9c8cfba 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VV1_1697 b0efab3a0c141ef5c730bf3bb9c8cfba 131 Pfam PF02033 Ribosome-binding factor A 7 110 4.0E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VV1_0776 6c55d6812fd95223799db7db9dbedeb1 184 Pfam PF02397 Bacterial sugar transferase 3 173 3.6E-49 T 14-10-2018 IPR003362 Bacterial sugar transferase VV1_0462 dfb9bb75b44ce82e4837725f78b6f0bd 556 Gene3D G3DSA:1.10.3720.10 287 549 1.2E-29 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0462 dfb9bb75b44ce82e4837725f78b6f0bd 556 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 287 547 2.4E-76 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VV1_0462 dfb9bb75b44ce82e4837725f78b6f0bd 556 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 323 537 1.0E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0462 dfb9bb75b44ce82e4837725f78b6f0bd 556 SUPERFAMILY SSF161098 285 537 9.03E-36 T 14-10-2018 IPR035906 MetI-like superfamily VV1_3028 87028256860911474f580233b41978d3 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.245 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_3028 87028256860911474f580233b41978d3 690 SUPERFAMILY SSF50249 588 689 1.13E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_3028 87028256860911474f580233b41978d3 690 Gene3D G3DSA:2.20.28.20 147 181 1.2E-159 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_3028 87028256860911474f580233b41978d3 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 556 689 4.1E-48 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 1.7E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 Pfam PF09334 tRNA synthetases class I (M) 14 401 5.7E-164 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_3028 87028256860911474f580233b41978d3 690 SUPERFAMILY SSF52374 10 392 1.34E-98 T 14-10-2018 VV1_3028 87028256860911474f580233b41978d3 690 SUPERFAMILY SSF57770 147 181 6.02E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_3028 87028256860911474f580233b41978d3 690 Gene3D G3DSA:3.40.50.620 14 389 1.2E-159 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_3028 87028256860911474f580233b41978d3 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 1.8E-198 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VV1_3028 87028256860911474f580233b41978d3 690 Gene3D G3DSA:2.40.50.140 579 690 1.9E-36 T 14-10-2018 VV1_3028 87028256860911474f580233b41978d3 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_3028 87028256860911474f580233b41978d3 690 Pfam PF01588 Putative tRNA binding domain 595 687 4.4E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VV1_3028 87028256860911474f580233b41978d3 690 SUPERFAMILY SSF47323 391 603 1.03E-43 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_3028 87028256860911474f580233b41978d3 690 Gene3D G3DSA:1.10.730.10 394 531 1.1E-33 T 14-10-2018 VV1_0580 b671559dedb2180903c22d46f148c234 442 SUPERFAMILY SSF53623 98 302 1.31E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0580 b671559dedb2180903c22d46f148c234 442 Gene3D G3DSA:3.40.1190.10 97 304 3.6E-66 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0580 b671559dedb2180903c22d46f148c234 442 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 441 32.639 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV1_0580 b671559dedb2180903c22d46f148c234 442 SUPERFAMILY SSF53244 304 441 2.7E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0580 b671559dedb2180903c22d46f148c234 442 Pfam PF08245 Mur ligase middle domain 113 284 1.2E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VV1_0580 b671559dedb2180903c22d46f148c234 442 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 376 3.7E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VV1_0580 b671559dedb2180903c22d46f148c234 442 SUPERFAMILY SSF51984 8 97 2.75E-17 T 14-10-2018 VV1_0580 b671559dedb2180903c22d46f148c234 442 Gene3D G3DSA:3.90.190.20 305 438 3.6E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0580 b671559dedb2180903c22d46f148c234 442 Gene3D G3DSA:3.40.50.720 6 96 1.8E-19 T 14-10-2018 VV1_0580 b671559dedb2180903c22d46f148c234 442 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 439 2.3E-131 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV2_1131 79404fc1f74a9323877905553e5f3600 378 SUPERFAMILY SSF51338 1 376 1.09E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_1131 79404fc1f74a9323877905553e5f3600 378 Pfam PF01979 Amidohydrolase family 52 364 3.4E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VV2_1131 79404fc1f74a9323877905553e5f3600 378 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 378 3.3E-115 T 14-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 VV2_1131 79404fc1f74a9323877905553e5f3600 378 Gene3D G3DSA:2.30.40.10 4 378 2.6E-139 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_1131 79404fc1f74a9323877905553e5f3600 378 PIRSF PIRSF001238 1 378 5.8E-146 T 14-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 VV2_1131 79404fc1f74a9323877905553e5f3600 378 Gene3D G3DSA:3.20.20.140 57 333 2.6E-139 T 14-10-2018 VV2_1131 79404fc1f74a9323877905553e5f3600 378 SUPERFAMILY SSF51556 56 334 3.96E-71 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_1319 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VV1_1319 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VV1_1319 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VV1_1319 96844abbb627fcde05e024c8cf5ff061 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VV1_1319 96844abbb627fcde05e024c8cf5ff061 289 SUPERFAMILY SSF52540 4 286 8.65E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1319 96844abbb627fcde05e024c8cf5ff061 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.0E-70 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VV1_1319 96844abbb627fcde05e024c8cf5ff061 289 Gene3D G3DSA:3.40.50.300 1 289 3.9E-112 T 14-10-2018 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 292 4.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 SUPERFAMILY SSF55874 300 442 2.62E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 SUPERFAMILY SSF47384 211 292 1.18E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 Gene3D G3DSA:1.10.287.130 179 294 3.6E-21 T 14-10-2018 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 SMART SM00388 228 293 3.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 439 2.2E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 SMART SM00387 336 445 1.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 5.9E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 5.9E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 5.9E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 Pfam PF08521 Two-component sensor kinase N-terminal 2 151 2.8E-8 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal VV2_1277 d62bc1cf74ebab9db46088caee39d40d 446 Gene3D G3DSA:3.30.565.10 297 445 1.1E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1038 5bc83f6b8a9649d0566f55310e15e1b8 473 Gene3D G3DSA:2.60.40.10 357 473 7.2E-47 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1038 5bc83f6b8a9649d0566f55310e15e1b8 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.2E-41 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_1038 5bc83f6b8a9649d0566f55310e15e1b8 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 1.6E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VV1_1038 5bc83f6b8a9649d0566f55310e15e1b8 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_1038 5bc83f6b8a9649d0566f55310e15e1b8 473 Pfam PF12801 4Fe-4S binding domain 97 136 9.6E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_1038 5bc83f6b8a9649d0566f55310e15e1b8 473 SUPERFAMILY SSF54862 107 352 1.0E-32 T 14-10-2018 VV1_1038 5bc83f6b8a9649d0566f55310e15e1b8 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.5E-172 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 Pfam PF13581 Histidine kinase-like ATPase domain 438 555 4.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 Gene3D G3DSA:3.30.565.10 415 558 9.4E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 Gene3D G3DSA:3.40.50.12740 1 165 3.9E-33 T 14-10-2018 VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 SMART SM00448 1 115 5.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 Gene3D G3DSA:3.60.40.10 166 384 3.3E-39 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 SUPERFAMILY SSF52172 1 150 3.84E-31 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 Pfam PF00072 Response regulator receiver domain 3 115 1.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 SMART SM00331 167 379 9.4E-17 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 379 6.8E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_1158 d340bb491558f26f73ca24dcc62ea496 558 SUPERFAMILY SSF81606 180 376 1.65E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 Gene3D G3DSA:3.30.70.2120 174 274 3.2E-77 T 14-10-2018 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 4.3E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 Pfam PF07196 Flagellin hook IN motif 193 248 1.3E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 Gene3D G3DSA:1.20.1330.10 44 326 3.2E-77 T 14-10-2018 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 SUPERFAMILY SSF64518 1 375 5.23E-96 T 14-10-2018 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 Gene3D G3DSA:1.10.8.410 327 375 2.5E-20 T 14-10-2018 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_1926 01b8662458cd39ea5621531dfab606e6 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_2146 8004699c36020d22bcf1ac74bfe70f09 357 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 329 9.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV1_2146 8004699c36020d22bcf1ac74bfe70f09 357 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 329 345 9.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV1_2146 8004699c36020d22bcf1ac74bfe70f09 357 Gene3D G3DSA:1.10.10.60 244 352 3.9E-25 T 14-10-2018 VV1_2146 8004699c36020d22bcf1ac74bfe70f09 357 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 39 220 1.7E-34 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VV1_2146 8004699c36020d22bcf1ac74bfe70f09 357 Pfam PF12833 Helix-turn-helix domain 269 347 2.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_2146 8004699c36020d22bcf1ac74bfe70f09 357 SMART SM00342 263 345 1.7E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_2146 8004699c36020d22bcf1ac74bfe70f09 357 SUPERFAMILY SSF46689 298 349 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2827 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 52 65 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV1_2827 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 3 21 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV1_2827 4bcc7ccefffcc162671a7ebd234332b7 87 PRINTS PR00160 Glutaredoxin signature 66 79 5.2E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV1_2827 4bcc7ccefffcc162671a7ebd234332b7 87 SUPERFAMILY SSF52833 3 81 3.94E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_2827 4bcc7ccefffcc162671a7ebd234332b7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.3E-47 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VV1_2827 4bcc7ccefffcc162671a7ebd234332b7 87 Pfam PF00462 Glutaredoxin 3 69 3.6E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV1_2827 4bcc7ccefffcc162671a7ebd234332b7 87 Gene3D G3DSA:3.40.30.10 1 84 1.3E-25 T 14-10-2018 VV2_0006 b00158fa919dd7aed2b01b9c3ce5651f 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 7.5E-72 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 VV2_0006 b00158fa919dd7aed2b01b9c3ce5651f 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 68.602 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 1.5E-28 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.30.70.260 296 383 3.8E-25 T 14-10-2018 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:1.20.59.10 3 112 1.9E-31 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 SMART SM00830 12 93 1.4E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF55021 284 381 1.37E-25 T 14-10-2018 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 193 278 4.1E-53 T 14-10-2018 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 PIRSF PIRSF001500 1 384 5.0E-141 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF00800 Prephenate dehydratase 110 291 8.4E-58 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF53850 109 294 1.52E-54 T 14-10-2018 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 SUPERFAMILY SSF48600 7 95 4.4E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 Gene3D G3DSA:3.40.190.10 113 287 4.1E-53 T 14-10-2018 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 Pfam PF01817 Chorismate mutase type II 12 91 8.5E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_0487 ea7f3d983d648b94cffaf27b815d66d3 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VV1_1245 221d2b1161b1ca5631e480aab05dd629 207 Pfam PF01914 MarC family integral membrane protein 3 204 7.6E-45 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV1_1245 221d2b1161b1ca5631e480aab05dd629 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 4.5E-41 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 1.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00091 155 221 2.5E-7 T 14-10-2018 IPR000014 PAS domain VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.20.120.160 665 780 1.5E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.40.50.2300 523 664 1.7E-27 T 14-10-2018 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.30.565.10 348 513 6.6E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF08448 PAS fold 162 271 4.6E-18 T 14-10-2018 IPR013656 PAS fold-4 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF00072 Response regulator receiver domain 529 638 1.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF55785 140 267 2.44E-25 T 14-10-2018 IPR035965 PAS domain superfamily VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.10.287.970 1 89 3.6E-39 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:1.10.287.130 268 345 3.3E-22 T 14-10-2018 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF01627 Hpt domain 691 764 1.5E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Gene3D G3DSA:3.30.450.20 150 267 2.1E-22 T 14-10-2018 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF47384 270 347 8.83E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF47226 666 779 6.93E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.2E-18 T 14-10-2018 IPR000014 PAS domain VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 4.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 PIRSF PIRSF003182 1 780 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00387 394 510 1.2E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF55874 336 507 1.44E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00448 527 638 5.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00388 282 347 1.9E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SMART SM00073 680 777 5.0E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_0550 19b44a1704536199e3183ae7b2576f2e 780 SUPERFAMILY SSF52172 527 642 3.98E-25 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.70.270 250 422 1.9E-49 T 14-10-2018 VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SMART SM00052 420 666 3.1E-104 T 14-10-2018 IPR001633 EAL domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55785 118 201 2.27E-7 T 14-10-2018 IPR035965 PAS domain superfamily VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Pfam PF13188 PAS domain 132 183 9.7E-7 T 14-10-2018 IPR000014 PAS domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 407 8.8E-36 T 14-10-2018 IPR000160 GGDEF domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.20.20.450 423 676 4.7E-94 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.450.20 3 128 5.6E-13 T 14-10-2018 VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55785 13 118 3.66E-10 T 14-10-2018 IPR035965 PAS domain superfamily VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SMART SM00267 238 410 1.3E-51 T 14-10-2018 IPR000160 GGDEF domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Gene3D G3DSA:3.30.450.20 129 239 3.2E-8 T 14-10-2018 VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Pfam PF08448 PAS fold 15 120 6.2E-9 T 14-10-2018 IPR013656 PAS fold-4 VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SMART SM00091 8 74 1.2E-4 T 14-10-2018 IPR000014 PAS domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SMART SM00091 131 197 0.012 T 14-10-2018 IPR000014 PAS domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF141868 427 674 1.57E-84 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1714 15a8aa586565a4635a74109d14e558ab 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 120 6.8E-9 T 14-10-2018 IPR000014 PAS domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 5.0E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_1714 15a8aa586565a4635a74109d14e558ab 679 SUPERFAMILY SSF55073 258 412 1.49E-45 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1714 15a8aa586565a4635a74109d14e558ab 679 Pfam PF00563 EAL domain 427 661 3.6E-72 T 14-10-2018 IPR001633 EAL domain VV1_2313 ea64c5f867e4416292a144a92d27bd88 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_2313 ea64c5f867e4416292a144a92d27bd88 163 SUPERFAMILY SSF54523 7 98 4.0E-11 T 14-10-2018 VV1_2313 ea64c5f867e4416292a144a92d27bd88 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_2313 ea64c5f867e4416292a144a92d27bd88 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.0E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_2313 ea64c5f867e4416292a144a92d27bd88 163 Gene3D G3DSA:3.30.700.10 7 89 1.4E-10 T 14-10-2018 VV1_3047 3de0ae36398ec23173e287959b313a24 170 SUPERFAMILY SSF55021 89 167 5.04E-10 T 14-10-2018 VV1_3047 3de0ae36398ec23173e287959b313a24 170 Pfam PF13740 ACT domain 5 66 2.3E-9 T 14-10-2018 VV1_3047 3de0ae36398ec23173e287959b313a24 170 Gene3D G3DSA:3.30.70.260 84 170 7.1E-13 T 14-10-2018 VV1_3047 3de0ae36398ec23173e287959b313a24 170 PIRSF PIRSF028103 1 169 3.9E-42 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 SUPERFAMILY SSF53822 76 320 3.53E-42 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 3.7E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 SUPERFAMILY SSF47413 3 52 1.97E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.8E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.8E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 Gene3D G3DSA:3.40.50.2300 158 320 4.1E-44 T 14-10-2018 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 SMART SM00354 1 66 3.2E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 Gene3D G3DSA:3.40.50.2300 79 318 4.1E-44 T 14-10-2018 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 Gene3D G3DSA:1.10.260.40 1 58 5.0E-18 T 14-10-2018 VV1_1769 b1dffbf26b344ebbab332269cfb5b8d0 332 Pfam PF13377 Periplasmic binding protein-like domain 167 326 1.9E-32 T 14-10-2018 VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 SUPERFAMILY SSF46785 4 117 1.15E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:1.10.10.10 2 89 3.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 Pfam PF03466 LysR substrate binding domain 95 299 2.8E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 SUPERFAMILY SSF53850 96 300 1.99E-35 T 14-10-2018 VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:3.40.190.10 98 298 3.1E-57 T 14-10-2018 VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 Gene3D G3DSA:3.40.190.10 168 269 3.1E-57 T 14-10-2018 VV1_0451 d45f46c021a17c2c34e4b95abf1cd15b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2564 ebaeb8b223cd1ef79fda4a24a8d06c7c 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 314 9.6E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_2564 ebaeb8b223cd1ef79fda4a24a8d06c7c 320 SMART SM00267 146 318 3.5E-52 T 14-10-2018 IPR000160 GGDEF domain VV1_2564 ebaeb8b223cd1ef79fda4a24a8d06c7c 320 Gene3D G3DSA:3.30.70.270 151 320 6.2E-54 T 14-10-2018 VV1_2564 ebaeb8b223cd1ef79fda4a24a8d06c7c 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 318 1.1E-51 T 14-10-2018 IPR000160 GGDEF domain VV1_2564 ebaeb8b223cd1ef79fda4a24a8d06c7c 320 SUPERFAMILY SSF55073 162 318 3.45E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2564 ebaeb8b223cd1ef79fda4a24a8d06c7c 320 Gene3D G3DSA:3.30.450.20 12 143 7.6E-30 T 14-10-2018 VV1_2564 ebaeb8b223cd1ef79fda4a24a8d06c7c 320 SUPERFAMILY SSF55785 14 95 6.98E-9 T 14-10-2018 IPR035965 PAS domain superfamily VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 Pfam PF07729 FCD domain 102 228 1.2E-21 T 14-10-2018 IPR011711 GntR, C-terminal VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 SUPERFAMILY SSF48008 100 237 2.12E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 5.6E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 SMART SM00345 21 80 6.3E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 SUPERFAMILY SSF46785 14 107 8.65E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 Gene3D G3DSA:1.10.10.10 12 83 2.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 Gene3D G3DSA:1.20.120.530 101 238 1.4E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV2_1065 6a4bb913e24d7ef840813ceb5917e8fe 263 SMART SM00895 102 229 9.5E-21 T 14-10-2018 IPR011711 GntR, C-terminal VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 SUPERFAMILY SSF51445 4 463 1.9E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 Pfam PF00128 Alpha amylase, catalytic domain 28 363 2.1E-123 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 SUPERFAMILY SSF51011 466 543 4.95E-19 T 14-10-2018 VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 Gene3D G3DSA:3.20.20.80 5 458 2.1E-201 T 14-10-2018 VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 539 2.4E-10 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 SMART SM00642 13 405 2.9E-156 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 Gene3D G3DSA:2.60.40.1180 467 544 2.9E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV2_0256 1c5411ecc09da5c7840e5519a0bc8e27 544 Gene3D G3DSA:3.90.400.10 105 175 2.1E-201 T 14-10-2018 VV1_3173 ce7864d3a65e3ae0599bfa8c499d75c9 440 Hamap MF_01935 Isochorismate synthase MenF [menF]. 8 432 31.892 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VV1_3173 ce7864d3a65e3ae0599bfa8c499d75c9 440 SUPERFAMILY SSF56322 29 430 2.35E-103 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV1_3173 ce7864d3a65e3ae0599bfa8c499d75c9 440 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 90 429 9.7E-101 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VV1_3173 ce7864d3a65e3ae0599bfa8c499d75c9 440 Gene3D G3DSA:3.60.120.10 4 434 9.1E-128 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV1_3173 ce7864d3a65e3ae0599bfa8c499d75c9 440 Pfam PF00425 chorismate binding enzyme 169 422 4.1E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VV1_2124 e50023889ee029a75663f390b6224158 232 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 5.2E-19 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VV1_2124 e50023889ee029a75663f390b6224158 232 SUPERFAMILY SSF55729 80 231 1.84E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2124 e50023889ee029a75663f390b6224158 232 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 225 4.5E-32 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VV1_2124 e50023889ee029a75663f390b6224158 232 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 231 35.386 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VV1_2124 e50023889ee029a75663f390b6224158 232 PIRSF PIRSF037208 1 232 1.8E-83 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VV1_1565 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF54768 108 222 4.24E-28 T 14-10-2018 VV1_1565 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:1.10.1520.10 3 149 5.7E-45 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VV1_1565 b888679212586fdca086b174896e19fc 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.378 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VV1_1565 b888679212586fdca086b174896e19fc 225 SMART SM00358 155 223 8.9E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VV1_1565 b888679212586fdca086b174896e19fc 225 Pfam PF14622 Ribonuclease-III-like 18 142 2.4E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VV1_1565 b888679212586fdca086b174896e19fc 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 3.0E-75 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VV1_1565 b888679212586fdca086b174896e19fc 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VV1_1565 b888679212586fdca086b174896e19fc 225 SMART SM00535 20 148 4.4E-57 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VV1_1565 b888679212586fdca086b174896e19fc 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 4.0E-15 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain VV1_1565 b888679212586fdca086b174896e19fc 225 Gene3D G3DSA:3.30.160.20 153 224 1.9E-19 T 14-10-2018 VV1_1565 b888679212586fdca086b174896e19fc 225 SUPERFAMILY SSF69065 4 158 1.1E-50 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 SMART SM00448 4 115 3.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 SUPERFAMILY SSF52172 3 173 5.55E-40 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1933 693c0a904a67a6299183d973fbb316bd 471 SUPERFAMILY SSF46689 342 462 6.27E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 SUPERFAMILY SSF52540 135 370 4.82E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1933 693c0a904a67a6299183d973fbb316bd 471 SMART SM00382 149 296 1.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1933 693c0a904a67a6299183d973fbb316bd 471 Pfam PF00158 Sigma-54 interaction domain 134 295 3.7E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 Gene3D G3DSA:3.40.50.300 120 300 1.1E-64 T 14-10-2018 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-33 T 14-10-2018 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_1933 693c0a904a67a6299183d973fbb316bd 471 Gene3D G3DSA:1.10.8.60 301 379 4.1E-30 T 14-10-2018 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 Gene3D G3DSA:1.10.10.60 402 467 1.5E-9 T 14-10-2018 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_1933 693c0a904a67a6299183d973fbb316bd 471 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 3.4E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1845 a4503c70d3dabe76b35854c0952ac211 328 Gene3D G3DSA:3.40.50.720 1 328 5.0E-67 T 14-10-2018 VV1_1845 a4503c70d3dabe76b35854c0952ac211 328 SUPERFAMILY SSF51735 1 326 9.01E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1845 a4503c70d3dabe76b35854c0952ac211 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 2.5E-32 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VV2_0576 2ed1ecc69fbe676a46423ad99e27d6cb 152 Gene3D G3DSA:1.10.10.10 11 152 1.7E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0576 2ed1ecc69fbe676a46423ad99e27d6cb 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0576 2ed1ecc69fbe676a46423ad99e27d6cb 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0576 2ed1ecc69fbe676a46423ad99e27d6cb 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0576 2ed1ecc69fbe676a46423ad99e27d6cb 152 SMART SM00347 39 137 9.8E-28 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0576 2ed1ecc69fbe676a46423ad99e27d6cb 152 Pfam PF01047 MarR family 46 102 2.5E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0576 2ed1ecc69fbe676a46423ad99e27d6cb 152 SUPERFAMILY SSF46785 16 151 1.87E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 SUPERFAMILY SSF46785 3 72 4.55E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 Gene3D G3DSA:1.10.10.10 4 72 1.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 SUPERFAMILY SSF64288 95 231 4.71E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 SMART SM00866 91 228 5.3E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 Gene3D G3DSA:3.40.1410.10 89 224 4.4E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 SMART SM00345 9 68 1.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 7.1E-91 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 1.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2393 e81516aee1e2ee5378203af83aca4cfd 235 Pfam PF07702 UTRA domain 92 228 4.7E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VV1_0758 e42ef59624df434beee326673e58f593 92 Pfam PF00203 Ribosomal protein S19 3 83 3.5E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.7E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 Gene3D G3DSA:3.30.860.10 1 92 1.4E-43 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.647 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 SUPERFAMILY SSF54570 3 84 2.62E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.2E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV1_0758 e42ef59624df434beee326673e58f593 92 PIRSF PIRSF002144 1 92 3.0E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0758 e42ef59624df434beee326673e58f593 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV2_0846 245eb4f75fb83fa0e80f5648b4e68e68 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 4.8E-67 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VV2_0846 245eb4f75fb83fa0e80f5648b4e68e68 301 SUPERFAMILY SSF56059 98 288 3.36E-50 T 14-10-2018 VV2_0846 245eb4f75fb83fa0e80f5648b4e68e68 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.247 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VV2_0846 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.40.50.20 1 114 1.5E-40 T 14-10-2018 VV2_0846 245eb4f75fb83fa0e80f5648b4e68e68 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 2.1E-84 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VV2_0846 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.30.1490.20 115 181 3.3E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV2_0846 245eb4f75fb83fa0e80f5648b4e68e68 301 Gene3D G3DSA:3.30.470.80 182 299 4.9E-43 T 14-10-2018 VV2_0909 1676cd7eb59a4a504cfe9d3485a0ad81 112 Gene3D G3DSA:3.40.50.300 1 102 2.3E-8 T 14-10-2018 VV2_0909 1676cd7eb59a4a504cfe9d3485a0ad81 112 SUPERFAMILY SSF52540 7 100 1.06E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2127 9e9bda2392442110e46b2cd05c889646 428 Gene3D G3DSA:3.65.10.10 242 419 3.5E-161 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 SUPERFAMILY SSF55205 1 424 4.06E-146 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 9.8E-158 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 35.694 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 PIRSF PIRSF000505 1 427 1.4E-157 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 2.1E-144 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VV1_2127 9e9bda2392442110e46b2cd05c889646 428 Gene3D G3DSA:3.65.10.10 20 224 3.5E-161 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VV2_1660 24bba797b0d5eceb088585b1a99b6b71 384 SUPERFAMILY SSF53383 3 379 5.06E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1660 24bba797b0d5eceb088585b1a99b6b71 384 Gene3D G3DSA:3.40.640.10 60 273 5.8E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1660 24bba797b0d5eceb088585b1a99b6b71 384 Pfam PF00155 Aminotransferase class I and II 31 375 9.3E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV2_1660 24bba797b0d5eceb088585b1a99b6b71 384 Gene3D G3DSA:3.90.1150.10 15 377 5.8E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_1387 0b1b4134655f24e543ef93502f8e2470 123 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV1_1387 0b1b4134655f24e543ef93502f8e2470 123 SUPERFAMILY SSF54995 1 103 1.09E-38 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1387 0b1b4134655f24e543ef93502f8e2470 123 Pfam PF01250 Ribosomal protein S6 3 91 1.1E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1387 0b1b4134655f24e543ef93502f8e2470 123 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.8E-39 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1387 0b1b4134655f24e543ef93502f8e2470 123 Gene3D G3DSA:3.30.70.60 1 92 4.5E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VV1_1387 0b1b4134655f24e543ef93502f8e2470 123 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.04 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 14-10-2018 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 SUPERFAMILY SSF50677 226 414 3.14E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.1E-79 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 1.8E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 5.0E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 1.4E-25 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.10.20.590 796 856 8.8E-24 T 14-10-2018 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.409 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.0E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 SUPERFAMILY SSF47323 660 856 2.8E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 SUPERFAMILY SSF52374 4 666 2.91E-147 T 14-10-2018 VV1_0272 78c003f14d1fc3b33b87db7736cea3ac 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 Gene3D G3DSA:1.10.8.260 263 323 2.3E-132 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily VV1_1118 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.2E-8 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 1.2E-8 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-8 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 SUPERFAMILY SSF51905 1 395 3.84E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1118 a532e81dff31e8465562988b980ba3e6 395 SUPERFAMILY SSF160996 191 339 9.29E-44 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 4.3E-6 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.3E-6 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.3E-6 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 Pfam PF03486 HI0933-like protein 5 393 4.2E-156 T 14-10-2018 VV1_1118 a532e81dff31e8465562988b980ba3e6 395 Gene3D G3DSA:3.50.50.60 8 389 2.3E-132 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1118 a532e81dff31e8465562988b980ba3e6 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 3.8E-132 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VV1_1118 a532e81dff31e8465562988b980ba3e6 395 Gene3D G3DSA:2.40.30.10 189 340 2.3E-132 T 14-10-2018 VV1_0596 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 6.5E-66 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VV1_0596 93f2fb93055df6939c8df7e296ca288a 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.5E-40 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VV1_0596 93f2fb93055df6939c8df7e296ca288a 421 Gene3D G3DSA:1.20.810.10 1 421 1.6E-149 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VV1_0596 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81342 6 296 5.97E-92 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VV1_0596 93f2fb93055df6939c8df7e296ca288a 421 PIRSF PIRSF038885 1 421 1.5E-151 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VV1_0596 93f2fb93055df6939c8df7e296ca288a 421 SUPERFAMILY SSF81648 297 411 2.62E-33 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF54106 408 452 5.49E-10 T 14-10-2018 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF53187 168 391 8.79E-52 T 14-10-2018 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01476 LysM domain 410 451 6.0E-13 T 14-10-2018 IPR018392 LysM domain VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01476 LysM domain 528 570 4.9E-14 T 14-10-2018 IPR018392 LysM domain VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01476 LysM domain 475 516 2.7E-10 T 14-10-2018 IPR018392 LysM domain VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.10.350.10 470 520 5.1E-13 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.10.350.10 406 455 1.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF54106 472 518 5.62E-9 T 14-10-2018 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Pfam PF11741 AMIN domain 33 135 8.7E-16 T 14-10-2018 IPR021731 AMIN domain VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:2.60.40.3500 24 137 5.2E-24 T 14-10-2018 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SUPERFAMILY SSF54106 527 570 1.96E-10 T 14-10-2018 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SMART SM00257 527 570 5.6E-15 T 14-10-2018 IPR018392 LysM domain VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SMART SM00257 409 452 1.3E-13 T 14-10-2018 IPR018392 LysM domain VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SMART SM00257 474 517 4.7E-12 T 14-10-2018 IPR018392 LysM domain VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 170 388 9.8E-49 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.10.350.10 521 572 3.9E-16 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1291 24d566444fb479f47ebd36218f7b24af 572 Gene3D G3DSA:3.40.630.40 156 398 4.8E-68 T 14-10-2018 VV1_1291 24d566444fb479f47ebd36218f7b24af 572 SMART SM00646 230 388 7.4E-61 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VV1_1124 e067f4b14e564076a0cdfeca1b7d312d 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 4.7E-43 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_1124 e067f4b14e564076a0cdfeca1b7d312d 104 Pfam PF01491 Frataxin-like domain 1 100 1.3E-29 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_1124 e067f4b14e564076a0cdfeca1b7d312d 104 SUPERFAMILY SSF55387 1 103 3.66E-39 T 14-10-2018 VV1_1124 e067f4b14e564076a0cdfeca1b7d312d 104 Gene3D G3DSA:3.30.920.10 1 104 1.4E-37 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_1124 e067f4b14e564076a0cdfeca1b7d312d 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_1124 e067f4b14e564076a0cdfeca1b7d312d 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.521 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_1124 e067f4b14e564076a0cdfeca1b7d312d 104 SMART SM01219 1 104 1.3E-54 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV2_0493 011bfd028b0a5585e6c6b9fbfc5eeb7d 497 SUPERFAMILY SSF53720 2 484 2.49E-144 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV2_0493 011bfd028b0a5585e6c6b9fbfc5eeb7d 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VV2_0493 011bfd028b0a5585e6c6b9fbfc5eeb7d 497 Gene3D G3DSA:3.40.309.10 250 450 9.2E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV2_0493 011bfd028b0a5585e6c6b9fbfc5eeb7d 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 2.8E-241 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VV2_0493 011bfd028b0a5585e6c6b9fbfc5eeb7d 497 Pfam PF00171 Aldehyde dehydrogenase family 13 477 7.3E-138 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV2_0493 011bfd028b0a5585e6c6b9fbfc5eeb7d 497 Gene3D G3DSA:3.40.605.10 24 458 9.2E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 30.218 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 Gene3D G3DSA:1.20.120.910 17 147 5.5E-36 T 14-10-2018 VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 3.0E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 SUPERFAMILY SSF109635 7 107 3.01E-37 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 9.9E-52 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VV1_1648 f616ea71206e1830dc6d9336140e6b9f 148 SUPERFAMILY SSF57716 108 146 5.84E-10 T 14-10-2018 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 Gene3D G3DSA:3.40.50.970 317 490 4.1E-66 T 14-10-2018 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 SMART SM00861 319 483 5.5E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 4.2E-28 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 4.9E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 SUPERFAMILY SSF52518 317 504 4.79E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.3E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 Gene3D G3DSA:3.40.50.920 495 621 9.4E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 SUPERFAMILY SSF52922 492 619 2.22E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.179 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 SUPERFAMILY SSF52518 9 381 3.69E-76 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_0315 1dddc203c955c93e8749a6a655d48da4 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 2.2E-304 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_0600 0422d03c7048652cf00d3ac29a176aa3 367 Pfam PF03969 AFG1-like ATPase 1 364 4.4E-156 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VV1_0600 0422d03c7048652cf00d3ac29a176aa3 367 SUPERFAMILY SSF52540 62 201 1.52E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0600 0422d03c7048652cf00d3ac29a176aa3 367 Gene3D G3DSA:3.40.50.300 13 190 1.7E-20 T 14-10-2018 VV1_0600 0422d03c7048652cf00d3ac29a176aa3 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.367 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VV2_0986 291e960f30173d97012ddb8fd878592f 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV2_0986 291e960f30173d97012ddb8fd878592f 458 Gene3D G3DSA:1.10.8.60 323 384 1.3E-14 T 14-10-2018 VV2_0986 291e960f30173d97012ddb8fd878592f 458 Pfam PF00158 Sigma-54 interaction domain 155 318 8.2E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV2_0986 291e960f30173d97012ddb8fd878592f 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV2_0986 291e960f30173d97012ddb8fd878592f 458 SUPERFAMILY SSF46689 395 450 1.08E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0986 291e960f30173d97012ddb8fd878592f 458 Gene3D G3DSA:3.40.50.300 145 322 2.6E-56 T 14-10-2018 VV2_0986 291e960f30173d97012ddb8fd878592f 458 SUPERFAMILY SSF52172 14 198 9.82E-42 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0986 291e960f30173d97012ddb8fd878592f 458 SMART SM00448 14 125 5.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0986 291e960f30173d97012ddb8fd878592f 458 Pfam PF00072 Response regulator receiver domain 16 125 2.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0986 291e960f30173d97012ddb8fd878592f 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV2_0986 291e960f30173d97012ddb8fd878592f 458 SUPERFAMILY SSF52540 155 377 4.7E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0986 291e960f30173d97012ddb8fd878592f 458 SMART SM00382 175 315 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0986 291e960f30173d97012ddb8fd878592f 458 Pfam PF02954 Bacterial regulatory protein, Fis family 409 448 7.5E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV2_0986 291e960f30173d97012ddb8fd878592f 458 Gene3D G3DSA:1.10.10.60 402 452 1.5E-7 T 14-10-2018 VV2_0986 291e960f30173d97012ddb8fd878592f 458 Gene3D G3DSA:3.40.50.2300 12 144 1.9E-34 T 14-10-2018 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 SMART SM00984 300 387 2.7E-12 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 SUPERFAMILY SSF48179 191 287 2.21E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 SUPERFAMILY SSF51735 1 194 7.34E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 Gene3D G3DSA:3.40.50.720 222 388 1.2E-68 T 14-10-2018 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 6.2E-9 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 Gene3D G3DSA:3.40.50.720 1 193 3.1E-56 T 14-10-2018 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.2E-28 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 PIRSF PIRSF000124 1 388 4.6E-136 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 1.4E-32 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 SUPERFAMILY SSF52413 283 387 3.14E-28 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 Gene3D G3DSA:1.20.5.100 194 220 9.5E-20 T 14-10-2018 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.6E-113 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 PIRSF PIRSF500134 1 343 1.9E-117 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VV1_0774 0f485ecbf9cda873458be22871cf63d8 388 PIRSF PIRSF500134 338 388 0.0062 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VV1_0241 04500d274685c967b248542a5065344a 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 3.3E-27 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VV1_0241 04500d274685c967b248542a5065344a 883 Gene3D G3DSA:3.30.379.10 204 329 3.7E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.2E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_0241 04500d274685c967b248542a5065344a 883 SUPERFAMILY SSF51445 332 772 1.1E-142 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_0241 04500d274685c967b248542a5065344a 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 6.0E-61 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VV1_0241 04500d274685c967b248542a5065344a 883 SUPERFAMILY SSF81296 781 882 1.25E-36 T 14-10-2018 IPR014756 Immunoglobulin E-set VV1_0241 04500d274685c967b248542a5065344a 883 SMART SM01081 34 195 3.5E-91 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VV1_0241 04500d274685c967b248542a5065344a 883 Gene3D G3DSA:2.60.40.290 25 167 1.3E-54 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VV1_0241 04500d274685c967b248542a5065344a 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 3.6E-108 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VV1_0241 04500d274685c967b248542a5065344a 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 1.4E-12 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VV1_0241 04500d274685c967b248542a5065344a 883 SUPERFAMILY SSF49384 26 198 7.74E-64 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VV1_0241 04500d274685c967b248542a5065344a 883 SUPERFAMILY SSF55545 208 331 4.19E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VV1_0241 04500d274685c967b248542a5065344a 883 Gene3D G3DSA:3.20.20.80 330 817 1.7E-164 T 14-10-2018 VV1_0241 04500d274685c967b248542a5065344a 883 Gene3D G3DSA:2.60.40.10 818 882 3.2E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 Gene3D G3DSA:3.40.50.720 1 180 1.0E-56 T 14-10-2018 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 Gene3D G3DSA:1.20.5.320 435 482 3.5E-25 T 14-10-2018 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 3.9E-234 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 3.9E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 PIRSF PIRSF000109 1 477 9.8E-243 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 2.9E-126 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 SMART SM01350 179 469 5.2E-215 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 Gene3D G3DSA:1.10.1040.10 181 434 6.3E-103 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 SUPERFAMILY SSF51735 4 174 6.79E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2682 6a52fec638c8c6a4185df51dcd91c20d 482 SUPERFAMILY SSF48179 177 472 9.07E-127 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_2336 2963da9581268033d5c7113a5a888b57 293 Pfam PF00482 Type II secretion system (T2SS), protein F 153 281 8.3E-21 T 14-10-2018 IPR018076 Type II secretion system F domain VV2_0449 ba0e2f99cb402d8bd0e4a631e87d9fc2 132 SUPERFAMILY SSF117856 3 130 3.14E-32 T 14-10-2018 VV2_0449 ba0e2f99cb402d8bd0e4a631e87d9fc2 132 Gene3D G3DSA:3.30.1330.80 2 132 2.1E-41 T 14-10-2018 VV2_0449 ba0e2f99cb402d8bd0e4a631e87d9fc2 132 Pfam PF03479 Domain of unknown function (DUF296) 6 109 6.5E-20 T 14-10-2018 IPR005175 PPC domain VV1_0025 710856153fec86426b861a3d9e49ca97 595 SUPERFAMILY SSF55874 440 590 4.19E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0025 710856153fec86426b861a3d9e49ca97 595 Pfam PF02743 Cache domain 34 271 2.1E-14 T 14-10-2018 IPR033479 Double Cache domain 1 VV1_0025 710856153fec86426b861a3d9e49ca97 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0025 710856153fec86426b861a3d9e49ca97 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0025 710856153fec86426b861a3d9e49ca97 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0025 710856153fec86426b861a3d9e49ca97 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0025 710856153fec86426b861a3d9e49ca97 595 Gene3D G3DSA:1.10.287.130 348 435 6.3E-20 T 14-10-2018 VV1_0025 710856153fec86426b861a3d9e49ca97 595 SMART SM00387 483 592 2.4E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0025 710856153fec86426b861a3d9e49ca97 595 SUPERFAMILY SSF103190 48 187 2.35E-30 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_0025 710856153fec86426b861a3d9e49ca97 595 Gene3D G3DSA:3.30.565.10 444 594 4.7E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0025 710856153fec86426b861a3d9e49ca97 595 SUPERFAMILY SSF47384 367 440 2.94E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_0025 710856153fec86426b861a3d9e49ca97 595 Gene3D G3DSA:3.30.450.20 41 279 5.6E-84 T 14-10-2018 VV1_0025 710856153fec86426b861a3d9e49ca97 595 Gene3D G3DSA:3.30.450.20 54 175 5.6E-84 T 14-10-2018 VV1_0025 710856153fec86426b861a3d9e49ca97 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 589 2.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0025 710856153fec86426b861a3d9e49ca97 595 PIRSF PIRSF036431 1 595 1.1E-204 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VV1_0025 710856153fec86426b861a3d9e49ca97 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 440 1.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0025 710856153fec86426b861a3d9e49ca97 595 SMART SM00388 372 440 2.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.2E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 Gene3D G3DSA:3.50.50.60 10 312 7.4E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.9E-123 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 SUPERFAMILY SSF51905 4 313 5.65E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 Gene3D G3DSA:3.50.50.60 118 244 7.4E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.9E-38 T 14-10-2018 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.9E-38 T 14-10-2018 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.9E-38 T 14-10-2018 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.9E-38 T 14-10-2018 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.9E-38 T 14-10-2018 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.8E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_2810 0ba974a77feeb02f679f517d1e32c016 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VV2_1472 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SMART SM00248 68 97 0.0085 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VV2_1472 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SMART SM00248 35 64 4400.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VV2_1472 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SMART SM00248 101 132 1900.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VV2_1472 be2b61b50ed0e28c6f13cc52e4aae6bb 157 Gene3D G3DSA:1.25.40.20 29 157 6.0E-22 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VV2_1472 be2b61b50ed0e28c6f13cc52e4aae6bb 157 Pfam PF12796 Ankyrin repeats (3 copies) 43 122 1.7E-10 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain VV2_1472 be2b61b50ed0e28c6f13cc52e4aae6bb 157 SUPERFAMILY SSF48403 39 155 3.48E-23 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.3E-71 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 PIRSF PIRSF002133 1 124 2.2E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 Gene3D G3DSA:2.40.50.140 1 124 8.4E-64 T 14-10-2018 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 SUPERFAMILY SSF50249 3 123 2.4E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.98 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1336 5ffbb7826d3b77841f4d614d00008e61 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.5E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0934 d4274d978f0baa515ef11db8331ac73a 90 Gene3D G3DSA:3.10.20.30 2 90 7.7E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_0934 d4274d978f0baa515ef11db8331ac73a 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 77 1.3E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV1_0934 d4274d978f0baa515ef11db8331ac73a 90 SUPERFAMILY SSF54292 1 87 5.77E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV1_0934 d4274d978f0baa515ef11db8331ac73a 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 6 109 1.3E-8 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 SMART SM00642 126 522 1.1E-91 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 SUPERFAMILY SSF81296 1 109 5.37E-25 T 14-10-2018 IPR014756 Immunoglobulin E-set VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 Pfam PF00128 Alpha amylase, catalytic domain 178 495 2.6E-80 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 Gene3D G3DSA:2.60.40.1180 526 611 2.2E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 Pfam PF16657 Maltogenic Amylase, C-terminal domain 531 594 1.8E-6 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 SUPERFAMILY SSF51445 114 531 1.1E-101 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 PIRSF PIRSF036918 1 612 3.9E-271 T 14-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 SUPERFAMILY SSF51011 531 611 3.09E-11 T 14-10-2018 VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 Gene3D G3DSA:3.20.20.80 114 524 8.9E-142 T 14-10-2018 VV1_2227 0aef56b0988b1254fd55589caf1e2132 612 Gene3D G3DSA:2.60.40.10 4 110 7.7E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 Pfam PF00271 Helicase conserved C-terminal domain 230 338 5.9E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 SMART SM00487 20 219 1.0E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 Gene3D G3DSA:3.40.50.300 216 432 1.5E-45 T 14-10-2018 VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 507 51.032 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 SMART SM00490 257 338 2.0E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 Pfam PF00270 DEAD/DEAH box helicase 26 194 3.4E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 Gene3D G3DSA:3.40.50.300 1 209 5.5E-75 T 14-10-2018 VV2_0608 dad66b8cc87dc6eeae377e99560094c9 509 SUPERFAMILY SSF52540 73 359 9.21E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 SMART SM00304 224 278 2.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 Gene3D G3DSA:1.10.287.950 224 555 4.4E-69 T 14-10-2018 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 Gene3D G3DSA:3.30.450.20 36 181 2.1E-53 T 14-10-2018 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 521 7.7E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 SMART SM01049 42 131 1.1E-32 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 Pfam PF17200 Single Cache domain 2 45 188 2.1E-38 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 SUPERFAMILY SSF58104 246 555 3.14E-72 T 14-10-2018 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 Pfam PF00672 HAMP domain 225 274 3.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0826 bd8825d02cc22914452ed00f96bccd91 555 SMART SM00283 282 554 1.0E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_3075 98489416b436fec58025fa5f47a16b9e 98 Gene3D G3DSA:3.30.70.1060 1 98 2.2E-38 T 14-10-2018 VV1_3075 98489416b436fec58025fa5f47a16b9e 98 Pfam PF03795 YCII-related domain 1 95 2.8E-30 T 14-10-2018 IPR005545 YCII-related VV1_3075 98489416b436fec58025fa5f47a16b9e 98 SUPERFAMILY SSF54909 1 98 2.68E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 3.1E-177 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 SUPERFAMILY SSF51395 434 1191 1.14E-247 T 14-10-2018 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.3E-152 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 SUPERFAMILY SSF69336 1213 1465 6.8E-88 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Pfam PF01493 GXGXG motif 1236 1419 3.4E-73 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.7E-100 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Gene3D G3DSA:2.160.20.60 1200 1468 6.2E-101 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Gene3D G3DSA:3.20.20.70 484 1173 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0555 38e90ad5e4b713f1efc939f38621abad 1487 SUPERFAMILY SSF56235 13 429 7.02E-150 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.2E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.5E-142 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 SUPERFAMILY SSF51569 7 335 3.66E-145 T 14-10-2018 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 Gene3D G3DSA:3.20.20.70 2 337 1.7E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 SMART SM01004 9 333 1.9E-245 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV1_0902 f6f2d999c5b52835405ee4a486ccd14a 347 PIRSF PIRSF001415 2 336 1.3E-152 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VV2_1410 770f4f74ef5c33dba4ea69fb1e38c5c8 643 Gene3D G3DSA:3.40.720.10 272 568 7.7E-182 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV2_1410 770f4f74ef5c33dba4ea69fb1e38c5c8 643 Gene3D G3DSA:3.30.1120.80 262 639 7.7E-182 T 14-10-2018 VV2_1410 770f4f74ef5c33dba4ea69fb1e38c5c8 643 Pfam PF00884 Sulfatase 281 551 1.4E-48 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV2_1410 770f4f74ef5c33dba4ea69fb1e38c5c8 643 PIRSF PIRSF005091 7 642 8.1E-103 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like VV2_1410 770f4f74ef5c33dba4ea69fb1e38c5c8 643 SUPERFAMILY SSF53649 279 607 5.5E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 SUPERFAMILY SSF111304 2 199 4.84E-72 T 14-10-2018 IPR023627 Recombination protein RecR VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 SMART SM00493 81 166 8.9E-17 T 14-10-2018 IPR006171 TOPRIM domain VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 Pfam PF02132 RecR protein 41 77 3.1E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.501 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 Pfam PF13662 Toprim domain 83 172 1.7E-22 T 14-10-2018 IPR006171 TOPRIM domain VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 Gene3D G3DSA:3.40.1360.10 78 199 3.0E-38 T 14-10-2018 VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 1.5E-77 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VV1_2005 7435ff70a3884cd1f3c81b924fd13953 200 Gene3D G3DSA:1.10.8.420 1 53 5.8E-19 T 14-10-2018 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.9E-20 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 2.1E-88 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 Gene3D G3DSA:2.30.130.10 249 311 4.5E-21 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 SUPERFAMILY SSF55120 9 247 2.82E-83 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 2.4E-57 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 5.7E-24 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 Gene3D G3DSA:3.30.2350.10 1 248 3.6E-95 T 14-10-2018 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.001 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1698 42426f7d9dc5085028ebd5c3e2fb43b1 314 SUPERFAMILY SSF88697 250 310 9.94E-15 T 14-10-2018 IPR015947 PUA-like superfamily VV1_1423 948869774577bac427750dc47da1da26 1226 Gene3D G3DSA:3.10.196.10 909 1224 1.3E-147 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 Gene3D G3DSA:1.10.288.10 938 1094 1.3E-147 T 14-10-2018 VV1_1423 948869774577bac427750dc47da1da26 1226 PIRSF PIRSF000381 3 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 SUPERFAMILY SSF47644 654 740 4.97E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 Pfam PF02607 B12 binding domain 660 734 9.7E-26 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 Gene3D G3DSA:1.10.1240.10 650 738 9.8E-41 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 Pfam PF02310 B12 binding domain 749 842 1.7E-17 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VV1_1423 948869774577bac427750dc47da1da26 1226 SUPERFAMILY SSF51717 357 631 1.44E-87 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 SUPERFAMILY SSF82282 8 400 1.57E-118 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VV1_1423 948869774577bac427750dc47da1da26 1226 Gene3D G3DSA:3.20.20.330 3 340 1.5E-129 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VV1_1423 948869774577bac427750dc47da1da26 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.3E-123 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 Gene3D G3DSA:3.40.50.280 745 896 8.3E-56 T 14-10-2018 VV1_1423 948869774577bac427750dc47da1da26 1226 SUPERFAMILY SSF52242 745 895 2.75E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VV1_1423 948869774577bac427750dc47da1da26 1226 SUPERFAMILY SSF56507 903 1225 1.18E-133 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 SMART SM01018 658 741 3.6E-45 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 Gene3D G3DSA:3.20.20.20 341 643 3.8E-131 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1423 948869774577bac427750dc47da1da26 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 4.9E-82 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VV1_1423 948869774577bac427750dc47da1da26 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.2E-58 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_0796 f2d7635356a1c9608b1d1ad41373df3b 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.7E-126 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VV1_0796 f2d7635356a1c9608b1d1ad41373df3b 313 Gene3D G3DSA:3.40.50.720 3 307 2.4E-115 T 14-10-2018 VV1_0796 f2d7635356a1c9608b1d1ad41373df3b 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.164 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VV1_0796 f2d7635356a1c9608b1d1ad41373df3b 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 5.2E-45 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VV1_0796 f2d7635356a1c9608b1d1ad41373df3b 313 SUPERFAMILY SSF51735 1 308 1.09E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0796 f2d7635356a1c9608b1d1ad41373df3b 313 Gene3D G3DSA:3.90.25.10 173 295 2.4E-115 T 14-10-2018 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 635 3.5E-31 T 14-10-2018 IPR000160 GGDEF domain VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF55073 483 636 4.63E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00267 466 639 4.3E-35 T 14-10-2018 IPR000160 GGDEF domain VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 93 209 1.97E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 291 324 49.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 133 166 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 93 126 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 174 207 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 331 364 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 251 284 0.0023 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SMART SM00028 211 244 55.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 176 321 5.31E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 SUPERFAMILY SSF48452 290 425 9.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.25.40.10 94 287 2.6E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:1.25.40.10 288 461 6.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 636 1.0E-32 T 14-10-2018 IPR000160 GGDEF domain VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 Pfam PF13424 Tetratricopeptide repeat 213 283 3.6E-10 T 14-10-2018 VV1_2719 d98c11bd6d4558a993c2f495163f0376 644 Gene3D G3DSA:3.30.70.270 469 638 1.8E-37 T 14-10-2018 VV1_0157 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:3.40.50.970 168 534 8.3E-149 T 14-10-2018 VV1_0157 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:3.40.50.12470 557 803 1.5E-172 T 14-10-2018 VV1_0157 86494e32fe4194e608de937f85478945 941 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV1_0157 86494e32fe4194e608de937f85478945 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 9.5E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV1_0157 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:3.40.50.11610 724 930 1.5E-172 T 14-10-2018 VV1_0157 86494e32fe4194e608de937f85478945 941 SMART SM00861 594 787 4.7E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV1_0157 86494e32fe4194e608de937f85478945 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 1.0E-13 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV1_0157 86494e32fe4194e608de937f85478945 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV1_0157 86494e32fe4194e608de937f85478945 941 SUPERFAMILY SSF52518 577 794 5.89E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_0157 86494e32fe4194e608de937f85478945 941 Gene3D G3DSA:1.10.287.1150 85 167 2.6E-30 T 14-10-2018 VV1_0157 86494e32fe4194e608de937f85478945 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.0E-53 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VV1_0157 86494e32fe4194e608de937f85478945 941 Pfam PF00676 Dehydrogenase E1 component 222 517 1.5E-49 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VV1_0157 86494e32fe4194e608de937f85478945 941 SUPERFAMILY SSF52518 122 545 6.48E-89 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_2456 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:3.30.420.10 166 321 2.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2456 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF13936 Helix-turn-helix domain 2 45 7.3E-16 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VV1_2456 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:1.10.10.60 3 45 1.6E-6 T 14-10-2018 VV1_2456 5b8c1ac9d3d22f1b385a847d838af100 322 SUPERFAMILY SSF53098 175 319 2.02E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2456 5b8c1ac9d3d22f1b385a847d838af100 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV1_2456 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF00665 Integrase core domain 173 279 5.0E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_2517 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:3.30.420.10 166 321 2.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2517 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF13936 Helix-turn-helix domain 2 45 7.3E-16 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VV1_2517 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:1.10.10.60 3 45 1.6E-6 T 14-10-2018 VV1_2517 5b8c1ac9d3d22f1b385a847d838af100 322 SUPERFAMILY SSF53098 175 319 2.02E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2517 5b8c1ac9d3d22f1b385a847d838af100 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV1_2517 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF00665 Integrase core domain 173 279 5.0E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_2529 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:3.30.420.10 166 321 2.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2529 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF13936 Helix-turn-helix domain 2 45 7.3E-16 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VV1_2529 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:1.10.10.60 3 45 1.6E-6 T 14-10-2018 VV1_2529 5b8c1ac9d3d22f1b385a847d838af100 322 SUPERFAMILY SSF53098 175 319 2.02E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2529 5b8c1ac9d3d22f1b385a847d838af100 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV1_2529 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF00665 Integrase core domain 173 279 5.0E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_2476 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:3.30.420.10 166 321 2.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2476 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF13936 Helix-turn-helix domain 2 45 7.3E-16 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VV1_2476 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:1.10.10.60 3 45 1.6E-6 T 14-10-2018 VV1_2476 5b8c1ac9d3d22f1b385a847d838af100 322 SUPERFAMILY SSF53098 175 319 2.02E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2476 5b8c1ac9d3d22f1b385a847d838af100 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV1_2476 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF00665 Integrase core domain 173 279 5.0E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_2451 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:3.30.420.10 166 321 2.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2451 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF13936 Helix-turn-helix domain 2 45 7.3E-16 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VV1_2451 5b8c1ac9d3d22f1b385a847d838af100 322 Gene3D G3DSA:1.10.10.60 3 45 1.6E-6 T 14-10-2018 VV1_2451 5b8c1ac9d3d22f1b385a847d838af100 322 SUPERFAMILY SSF53098 175 319 2.02E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2451 5b8c1ac9d3d22f1b385a847d838af100 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV1_2451 5b8c1ac9d3d22f1b385a847d838af100 322 Pfam PF00665 Integrase core domain 173 279 5.0E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_1506 9396aa18152b959cc1968f68599e2a1f 243 Gene3D G3DSA:3.60.15.10 17 237 2.1E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_1506 9396aa18152b959cc1968f68599e2a1f 243 SUPERFAMILY SSF56281 16 236 3.38E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_1506 9396aa18152b959cc1968f68599e2a1f 243 SMART SM00849 29 218 3.8E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_1506 9396aa18152b959cc1968f68599e2a1f 243 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 3.3E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_2579 39be757ef89b578bef7e74ddcb7bf4c1 293 SUPERFAMILY SSF82689 198 286 1.57E-7 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VV1_2579 39be757ef89b578bef7e74ddcb7bf4c1 293 Gene3D G3DSA:3.30.70.100 196 290 6.9E-7 T 14-10-2018 VV1_2579 39be757ef89b578bef7e74ddcb7bf4c1 293 Gene3D G3DSA:2.30.30.60 141 189 3.0E-8 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VV1_2579 39be757ef89b578bef7e74ddcb7bf4c1 293 Pfam PF00924 Mechanosensitive ion channel 87 284 2.9E-35 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV1_2579 39be757ef89b578bef7e74ddcb7bf4c1 293 SUPERFAMILY SSF50182 126 186 3.27E-14 T 14-10-2018 IPR010920 LSM domain superfamily VV2_0672 84f694d754697b3ac2fa04007e977a67 447 Gene3D G3DSA:1.20.1530.10 293 443 4.4E-48 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VV2_0672 84f694d754697b3ac2fa04007e977a67 447 Gene3D G3DSA:1.20.1530.10 24 282 3.2E-75 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VV2_0672 84f694d754697b3ac2fa04007e977a67 447 Pfam PF06965 Na+/H+ antiporter 1 29 435 3.3E-127 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV2_0672 84f694d754697b3ac2fa04007e977a67 447 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 30 435 1.5E-104 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV2_0672 84f694d754697b3ac2fa04007e977a67 447 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 27 442 20.998 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV2_1278 aad668873ab652604327d3baad281671 218 SUPERFAMILY SSF52172 1 118 3.84E-35 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1278 aad668873ab652604327d3baad281671 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 1.5E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_1278 aad668873ab652604327d3baad281671 218 SUPERFAMILY SSF46894 118 216 4.82E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1278 aad668873ab652604327d3baad281671 218 Gene3D G3DSA:3.40.50.2300 1 121 2.1E-36 T 14-10-2018 VV2_1278 aad668873ab652604327d3baad281671 218 SMART SM00448 1 112 1.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1278 aad668873ab652604327d3baad281671 218 Gene3D G3DSA:1.10.10.10 122 218 5.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1278 aad668873ab652604327d3baad281671 218 Pfam PF00072 Response regulator receiver domain 4 112 9.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1278 aad668873ab652604327d3baad281671 218 SMART SM00862 145 216 3.5E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 Gene3D G3DSA:3.20.20.300 494 806 4.7E-85 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 SMART SM01217 329 405 1.2E-21 T 14-10-2018 IPR026891 Fibronectin type III-like domain VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 Gene3D G3DSA:3.40.50.1700 10 286 2.8E-74 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 Pfam PF14310 Fibronectin type III-like domain 329 404 1.9E-16 T 14-10-2018 IPR026891 Fibronectin type III-like domain VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 25 264 4.3E-42 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 SUPERFAMILY SSF51445 496 853 3.79E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 712 729 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 Gene3D G3DSA:2.60.40.10 301 424 1.0E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 502 796 1.2E-59 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 SUPERFAMILY SSF52279 25 288 2.09E-34 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 712 730 6.5E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 565 584 6.5E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 611 627 6.5E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 539 555 6.5E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV2_1304 c44dbd8e512b07dc36e481eee0859146 933 PRINTS PR00133 Glycosyl hydrolase family 3 signature 642 658 6.5E-28 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 Gene3D G3DSA:3.90.78.10 223 346 2.3E-43 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 SUPERFAMILY SSF56194 207 342 1.96E-46 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 Pfam PF01565 FAD binding domain 23 144 2.2E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 Gene3D G3DSA:3.30.43.10 1 72 2.1E-22 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 333 6.8E-91 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 Gene3D G3DSA:3.30.465.10 73 222 3.6E-52 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 332 4.0E-32 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 SUPERFAMILY SSF56176 8 197 1.83E-41 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VV1_1197 2944632cc5a768043cd75d80ec9f6b21 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.751 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0873 0e0277820c8ea0374a0f0738fff7be18 217 Gene3D G3DSA:3.40.30.10 1 78 1.1E-13 T 14-10-2018 VV2_0873 0e0277820c8ea0374a0f0738fff7be18 217 SUPERFAMILY SSF52833 3 86 2.33E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0873 0e0277820c8ea0374a0f0738fff7be18 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 76 1.3E-7 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV2_0873 0e0277820c8ea0374a0f0738fff7be18 217 Gene3D G3DSA:1.20.1050.10 84 189 5.3E-38 T 14-10-2018 VV2_0873 0e0277820c8ea0374a0f0738fff7be18 217 SUPERFAMILY SSF47616 85 199 8.43E-12 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV1_0122 ded580f8cb2cfeaad70a3d5c6b341c32 348 Pfam PF00589 Phage integrase family 141 314 2.4E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_0122 ded580f8cb2cfeaad70a3d5c6b341c32 348 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 20 99 8.6E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV1_0122 ded580f8cb2cfeaad70a3d5c6b341c32 348 Gene3D G3DSA:1.10.443.10 123 322 7.9E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_0122 ded580f8cb2cfeaad70a3d5c6b341c32 348 SUPERFAMILY SSF56349 20 320 9.71E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_0122 ded580f8cb2cfeaad70a3d5c6b341c32 348 Gene3D G3DSA:1.10.150.130 16 109 9.8E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VV1_0195 a716dc47b8081d6d7a110f11f980134f 135 SUPERFAMILY SSF54631 7 126 2.27E-24 T 14-10-2018 VV1_0195 a716dc47b8081d6d7a110f11f980134f 135 Pfam PF00571 CBS domain 78 125 3.8E-10 T 14-10-2018 IPR000644 CBS domain VV1_0195 a716dc47b8081d6d7a110f11f980134f 135 Gene3D G3DSA:3.10.580.10 2 135 1.7E-27 T 14-10-2018 VV1_0195 a716dc47b8081d6d7a110f11f980134f 135 SMART SM00116 16 65 6.5 T 14-10-2018 IPR000644 CBS domain VV1_0195 a716dc47b8081d6d7a110f11f980134f 135 SMART SM00116 83 130 3.5E-7 T 14-10-2018 IPR000644 CBS domain VV1_2772 3d82793c2aae3a1648a3b7e68ffbc71e 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.4E-136 T 14-10-2018 IPR033752 MetA family VV1_2772 3d82793c2aae3a1648a3b7e68ffbc71e 313 Gene3D G3DSA:3.40.50.880 1 301 8.0E-126 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_2772 3d82793c2aae3a1648a3b7e68ffbc71e 313 PIRSF PIRSF000450 1 309 2.2E-148 T 14-10-2018 IPR033752 MetA family VV1_2772 3d82793c2aae3a1648a3b7e68ffbc71e 313 SUPERFAMILY SSF52317 18 297 1.71E-103 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_2772 3d82793c2aae3a1648a3b7e68ffbc71e 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 4.0E-140 T 14-10-2018 VV1_2772 3d82793c2aae3a1648a3b7e68ffbc71e 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.3E-162 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 VV1_2772 3d82793c2aae3a1648a3b7e68ffbc71e 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.712 T 14-10-2018 IPR033752 MetA family VV1_2216 4f6a658fdc37f0bfbcd179877314f4e8 76 Pfam PF14056 Domain of unknown function (DUF4250) 20 71 3.0E-18 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VV1_0630 48bcb3ecd338f1252e18aa192f206944 147 Pfam PF09424 Yqey-like protein 5 146 5.7E-58 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VV1_0630 48bcb3ecd338f1252e18aa192f206944 147 Gene3D G3DSA:1.10.1510.10 1 90 2.0E-28 T 14-10-2018 VV1_0630 48bcb3ecd338f1252e18aa192f206944 147 Gene3D G3DSA:1.10.10.410 91 147 8.9E-20 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VV1_0630 48bcb3ecd338f1252e18aa192f206944 147 SUPERFAMILY SSF89095 1 146 3.66E-44 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VV1_0859 516401142fe83c67cdc680bdedc53762 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 50.933 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 SUPERFAMILY SSF54534 80 156 3.4E-20 T 14-10-2018 VV1_0859 516401142fe83c67cdc680bdedc53762 160 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 3.1E-72 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 PIRSF PIRSF006092 1 158 1.9E-44 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VV1_0859 516401142fe83c67cdc680bdedc53762 160 Gene3D G3DSA:1.10.287.180 1 76 2.9E-30 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 SUPERFAMILY SSF46557 3 77 2.49E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.1E-25 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.4E-23 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VV1_0859 516401142fe83c67cdc680bdedc53762 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 27.236 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VV1_0859 516401142fe83c67cdc680bdedc53762 160 Gene3D G3DSA:3.10.50.30 77 159 5.5E-32 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VV2_0820 3245af0720359d27d7af3e7f6b2eac2f 1205 Gene3D G3DSA:2.10.10.20 454 507 1.3E-12 T 14-10-2018 VV2_0820 3245af0720359d27d7af3e7f6b2eac2f 1205 SUPERFAMILY SSF51055 456 507 2.16E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_0820 3245af0720359d27d7af3e7f6b2eac2f 1205 SMART SM00495 462 503 8.8E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_0820 3245af0720359d27d7af3e7f6b2eac2f 1205 Pfam PF14600 Cellulose-binding domain 454 507 6.1E-14 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VV2_0820 3245af0720359d27d7af3e7f6b2eac2f 1205 Gene3D G3DSA:2.60.40.10 350 446 2.9E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0820 3245af0720359d27d7af3e7f6b2eac2f 1205 Gene3D G3DSA:2.60.40.10 156 246 4.3E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0820 3245af0720359d27d7af3e7f6b2eac2f 1205 Gene3D G3DSA:2.60.40.10 256 347 7.5E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1525 69aab8cb4332cd2d565d5ecde9d331fe 248 Pfam PF07238 PilZ domain 134 234 1.8E-15 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VV2_1525 69aab8cb4332cd2d565d5ecde9d331fe 248 Pfam PF12945 Flagellar protein YcgR 38 127 6.3E-15 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VV2_1525 69aab8cb4332cd2d565d5ecde9d331fe 248 Gene3D G3DSA:2.30.110.10 23 136 1.4E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VV2_1525 69aab8cb4332cd2d565d5ecde9d331fe 248 SUPERFAMILY SSF141371 138 247 4.45E-33 T 14-10-2018 VV2_1525 69aab8cb4332cd2d565d5ecde9d331fe 248 Gene3D G3DSA:2.40.10.220 137 248 4.3E-38 T 14-10-2018 VV2_1525 69aab8cb4332cd2d565d5ecde9d331fe 248 SUPERFAMILY SSF141371 24 137 5.49E-35 T 14-10-2018 VV1_2302 b7b2600e41b5a0a6abb99139a70a0d6b 471 SUPERFAMILY SSF51735 145 272 4.53E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2302 b7b2600e41b5a0a6abb99139a70a0d6b 471 Pfam PF13727 CoA-binding domain 62 245 1.1E-29 T 14-10-2018 VV1_2302 b7b2600e41b5a0a6abb99139a70a0d6b 471 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 471 2.1E-157 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VV1_2302 b7b2600e41b5a0a6abb99139a70a0d6b 471 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 471 3.3E-141 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VV1_2302 b7b2600e41b5a0a6abb99139a70a0d6b 471 Pfam PF02397 Bacterial sugar transferase 281 463 1.9E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase VV1_2302 b7b2600e41b5a0a6abb99139a70a0d6b 471 Gene3D G3DSA:3.40.50.720 144 265 1.2E-13 T 14-10-2018 VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF04542 Sigma-70 region 2 33 99 1.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88946 27 109 2.38E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 1.9E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.1740.10 12 95 1.0E-18 T 14-10-2018 VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 SUPERFAMILY SSF88659 120 180 3.18E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 Pfam PF08281 Sigma-70, region 4 123 175 5.8E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1974 551f998f6e449c5e4708d33b9cf0d3a7 191 Gene3D G3DSA:1.10.10.10 117 181 1.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1285 0db3ef153d27f4da7d06d15d593c13c6 352 Gene3D G3DSA:1.10.40.50 275 349 5.2E-26 T 14-10-2018 VV1_1285 0db3ef153d27f4da7d06d15d593c13c6 352 SUPERFAMILY SSF52540 114 337 1.78E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1285 0db3ef153d27f4da7d06d15d593c13c6 352 Gene3D G3DSA:2.40.50.140 36 102 2.1E-20 T 14-10-2018 VV1_1285 0db3ef153d27f4da7d06d15d593c13c6 352 Pfam PF03193 RsgA GTPase 100 275 2.9E-58 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VV1_1285 0db3ef153d27f4da7d06d15d593c13c6 352 Gene3D G3DSA:3.40.50.300 103 274 2.1E-50 T 14-10-2018 VV1_1285 0db3ef153d27f4da7d06d15d593c13c6 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 339 37.666 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VV1_1285 0db3ef153d27f4da7d06d15d593c13c6 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 333 1.8E-89 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VV2_1364 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 Pfam PF01048 Phosphorylase superfamily 23 271 4.6E-42 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV2_1364 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 Gene3D G3DSA:3.40.50.1580 2 274 1.4E-101 T 14-10-2018 VV2_1364 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 PIRSF PIRSF000477 2 273 7.3E-103 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 VV2_1364 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 SUPERFAMILY SSF53167 4 272 1.24E-81 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VV2_1364 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 23 271 1.7E-124 T 14-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV2_1364 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 23 271 4.5E-97 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 VV2_1364 ef0cdf766d913ff8f4ac0f02ec3de0fb 277 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 VV2_1416 102e012516fde79a4d8706a2877638a3 211 Pfam PF13460 NAD(P)H-binding 7 197 5.9E-32 T 14-10-2018 IPR016040 NAD(P)-binding domain VV2_1416 102e012516fde79a4d8706a2877638a3 211 SUPERFAMILY SSF51735 1 209 1.04E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1416 102e012516fde79a4d8706a2877638a3 211 Gene3D G3DSA:3.40.50.720 1 210 1.7E-46 T 14-10-2018 VV1_2571 8ec3a683172c0f61181467e1c9146a34 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 1.2E-33 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.420.10 329 544 1.7E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.30.70.370 666 927 7.8E-114 T 14-10-2018 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:3.40.50.1010 9 284 9.5E-95 T 14-10-2018 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00474 332 519 9.8E-41 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 891 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 2.1E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00482 688 895 5.6E-119 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF01612 3'-5' exonuclease 332 516 2.5E-38 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF56672 526 931 5.56E-159 T 14-10-2018 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.20.1060.10 545 660 1.7E-42 T 14-10-2018 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 TIGRFAM TIGR00593 pola: DNA polymerase I 9 931 1.4E-288 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 6.5E-55 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.10.150.20 174 253 9.5E-95 T 14-10-2018 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00475 7 267 9.8E-123 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF88723 7 170 1.86E-58 T 14-10-2018 IPR029060 PIN-like domain superfamily VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 5.6E-28 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF47807 171 291 2.54E-29 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Pfam PF00476 DNA polymerase family A 553 928 3.7E-157 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SMART SM00279 173 208 1.2E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 SUPERFAMILY SSF53098 335 520 5.24E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_0901 80f34bf5ad1ff879346e8bc5a5073679 931 Gene3D G3DSA:1.10.150.20 711 854 7.8E-114 T 14-10-2018 VV1_0160 4e40f88986ebad73401cd567c031c963 114 SUPERFAMILY SSF81343 4 113 9.65E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0160 4e40f88986ebad73401cd567c031c963 114 Gene3D G3DSA:1.20.1300.10 1 114 1.0E-27 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0160 4e40f88986ebad73401cd567c031c963 114 PIRSF PIRSF000169 1 114 7.7E-37 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VV1_0160 4e40f88986ebad73401cd567c031c963 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 7.1E-34 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 Gene3D G3DSA:3.30.450.40 400 559 8.0E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 SUPERFAMILY SSF55781 406 569 1.18E-5 T 14-10-2018 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 SUPERFAMILY SSF103190 156 232 5.96E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 Gene3D G3DSA:3.30.450.20 223 303 1.3E-13 T 14-10-2018 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 SUPERFAMILY SSF109604 578 687 8.48E-7 T 14-10-2018 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 Pfam PF13487 HD domain 809 874 2.9E-24 T 14-10-2018 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 Pfam PF02743 Cache domain 40 278 3.6E-13 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 SUPERFAMILY SSF109604 810 918 5.02E-9 T 14-10-2018 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 SMART SM00471 583 892 1.4E-5 T 14-10-2018 IPR003607 HD/PDEase domain VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 Gene3D G3DSA:1.10.3210.10 562 664 4.3E-19 T 14-10-2018 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 Gene3D G3DSA:1.10.3210.10 801 935 2.8E-29 T 14-10-2018 VV2_1467 7fe41af72ec86f342bbef159e05e1147 959 Gene3D G3DSA:3.30.450.20 138 222 1.3E-13 T 14-10-2018 VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 9.2E-88 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 SUPERFAMILY SSF82866 74 293 3.92E-41 T 14-10-2018 VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 Gene3D G3DSA:1.20.1640.10 105 300 4.6E-12 T 14-10-2018 VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.224 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 6.8E-57 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 Pfam PF02355 Protein export membrane protein 111 292 8.3E-72 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV1_0442 85cf79c51991ea7a4105c87d2a1d32a0 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 419 43.235 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 Pfam PF01479 S4 domain 359 388 9.8E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 Gene3D G3DSA:3.40.50.620 4 225 8.1E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 186 208 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 165 180 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 219 231 3.7E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 Gene3D G3DSA:3.10.290.10 329 421 1.3E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 SUPERFAMILY SSF55174 324 418 3.93E-14 T 14-10-2018 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 Pfam PF00579 tRNA synthetases class I (W and Y) 32 326 2.0E-83 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 418 5.7E-119 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 SUPERFAMILY SSF52374 7 326 6.06E-99 T 14-10-2018 VV2_0878 964dedba80dd7f1068ceddcf3783767c 422 Gene3D G3DSA:1.10.240.10 226 328 1.6E-36 T 14-10-2018 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 330 339 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 Pfam PF14532 Sigma-54 interaction domain 143 288 1.4E-16 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 Gene3D G3DSA:1.10.10.60 359 417 1.8E-11 T 14-10-2018 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 Pfam PF02954 Bacterial regulatory protein, Fis family 371 411 5.4E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 Gene3D G3DSA:3.40.50.300 141 288 2.2E-22 T 14-10-2018 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 Gene3D G3DSA:1.10.8.60 290 358 3.2E-17 T 14-10-2018 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 Pfam PF00072 Response regulator receiver domain 8 117 7.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 SUPERFAMILY SSF52540 142 346 1.51E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 SUPERFAMILY SSF52172 4 187 5.83E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 Gene3D G3DSA:3.40.50.2300 3 138 7.5E-33 T 14-10-2018 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 SUPERFAMILY SSF46689 363 413 1.18E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0210 29a6c1b6d701d06dbbcd5aceac61e11a 421 SMART SM00448 6 117 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2098 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 Pfam PF01228 Glycine radical 628 739 2.0E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VV1_2098 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 PIRSF PIRSF000379 5 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VV1_2098 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 8.4E-204 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VV1_2098 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VV1_2098 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 14-10-2018 VV1_2098 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 SUPERFAMILY SSF51998 4 757 8.01E-287 T 14-10-2018 VV1_2098 7a25c8ad2a13e1e256b7aaf7b6f8d784 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 7.0E-38 T 14-10-2018 IPR006512 YidE/YbjL duplication VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 1.2E-27 T 14-10-2018 IPR006512 YidE/YbjL duplication VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 SUPERFAMILY SSF116726 294 377 2.35E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF02080 TrkA-C domain 309 374 2.0E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF02080 TrkA-C domain 232 281 5.6E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 Gene3D G3DSA:3.30.70.1450 228 288 2.1E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 SUPERFAMILY SSF116726 230 285 5.75E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.658 T 14-10-2018 IPR023017 Transport protein YbjL, putative VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.5E-35 T 14-10-2018 IPR006512 YidE/YbjL duplication VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 1.6E-42 T 14-10-2018 IPR006512 YidE/YbjL duplication VV1_2828 af3897bb5d9dcc6482573ab0cabcee00 560 Gene3D G3DSA:3.30.70.1450 304 376 1.7E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV2_1665 d7d28befbc1fc73330fc72d2675f1ba7 336 Gene3D G3DSA:3.40.190.10 30 297 1.2E-78 T 14-10-2018 VV2_1665 d7d28befbc1fc73330fc72d2675f1ba7 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 1.7E-159 T 14-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative VV2_1665 d7d28befbc1fc73330fc72d2675f1ba7 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 1.6E-26 T 14-10-2018 VV2_1665 d7d28befbc1fc73330fc72d2675f1ba7 336 PIRSF PIRSF002825 2 329 7.5E-79 T 14-10-2018 IPR026045 Ferric binding protein VV2_1665 d7d28befbc1fc73330fc72d2675f1ba7 336 SUPERFAMILY SSF53850 27 326 7.25E-63 T 14-10-2018 VV2_1665 d7d28befbc1fc73330fc72d2675f1ba7 336 Gene3D G3DSA:3.40.190.10 133 311 1.2E-78 T 14-10-2018 VV1_2678 a57316c027bff39b62e3a9bb1849e801 126 SUPERFAMILY SSF54593 1 125 2.28E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2678 a57316c027bff39b62e3a9bb1849e801 126 Gene3D G3DSA:3.10.180.10 1 126 4.8E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2113 0d200daed7453a1f98a29792e103dd02 703 SUPERFAMILY SSF52540 519 678 8.09E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2113 0d200daed7453a1f98a29792e103dd02 703 SMART SM00491 551 683 1.1E-27 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV1_2113 0d200daed7453a1f98a29792e103dd02 703 Pfam PF13307 Helicase C-terminal domain 537 696 2.8E-36 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VV1_2113 0d200daed7453a1f98a29792e103dd02 703 Gene3D G3DSA:3.40.50.300 38 317 2.8E-39 T 14-10-2018 VV1_2113 0d200daed7453a1f98a29792e103dd02 703 SUPERFAMILY SSF52540 27 679 2.9E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2113 0d200daed7453a1f98a29792e103dd02 703 Pfam PF06733 DEAD_2 210 273 1.4E-4 T 14-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VV1_2113 0d200daed7453a1f98a29792e103dd02 703 Gene3D G3DSA:3.40.50.300 511 701 6.7E-34 T 14-10-2018 VV1_2113 0d200daed7453a1f98a29792e103dd02 703 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 45 702 36.427 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VV2_0264 a359452202a54377404da4db0e8f88a4 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 358 2.1E-14 T 14-10-2018 IPR000160 GGDEF domain VV2_0264 a359452202a54377404da4db0e8f88a4 638 SUPERFAMILY SSF141868 378 629 2.22E-82 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0264 a359452202a54377404da4db0e8f88a4 638 Pfam PF00563 EAL domain 381 613 8.6E-69 T 14-10-2018 IPR001633 EAL domain VV2_0264 a359452202a54377404da4db0e8f88a4 638 SMART SM00052 373 618 2.3E-102 T 14-10-2018 IPR001633 EAL domain VV2_0264 a359452202a54377404da4db0e8f88a4 638 SMART SM00065 14 159 7.8E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_0264 a359452202a54377404da4db0e8f88a4 638 SUPERFAMILY SSF55073 209 362 2.2E-16 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0264 a359452202a54377404da4db0e8f88a4 638 SMART SM00267 192 363 8.8E-7 T 14-10-2018 IPR000160 GGDEF domain VV2_0264 a359452202a54377404da4db0e8f88a4 638 SUPERFAMILY SSF55781 16 163 4.32E-19 T 14-10-2018 VV2_0264 a359452202a54377404da4db0e8f88a4 638 Gene3D G3DSA:3.30.450.40 12 170 4.5E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_0264 a359452202a54377404da4db0e8f88a4 638 Gene3D G3DSA:3.20.20.450 375 626 2.8E-87 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0264 a359452202a54377404da4db0e8f88a4 638 Gene3D G3DSA:3.30.70.270 197 369 3.4E-18 T 14-10-2018 VV2_1577 f52b32167f8ca01dd0377ba2ca8b684a 277 SUPERFAMILY SSF52540 17 145 2.29E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1577 f52b32167f8ca01dd0377ba2ca8b684a 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 9.0E-62 T 14-10-2018 IPR018831 Uncharacterised protein family NKWYS VV1_3122 6680820583615e0ec1f28006dfbb41d7 606 Gene3D G3DSA:3.40.720.10 248 529 2.7E-38 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_3122 6680820583615e0ec1f28006dfbb41d7 606 Pfam PF00884 Sulfatase 273 519 9.9E-24 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV1_3122 6680820583615e0ec1f28006dfbb41d7 606 SUPERFAMILY SSF53649 256 586 3.78E-51 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_3122 6680820583615e0ec1f28006dfbb41d7 606 PIRSF PIRSF004950 6 604 4.9E-251 T 14-10-2018 IPR012159 Inner membrane protein YejM VV1_3122 6680820583615e0ec1f28006dfbb41d7 606 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 5.9E-99 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VV2_0917 dcac40a75b8acc3b5cf542d86020b510 245 SUPERFAMILY SSF53098 44 229 1.35E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_0917 dcac40a75b8acc3b5cf542d86020b510 245 Gene3D G3DSA:3.30.420.10 45 234 1.9E-29 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV2_0917 dcac40a75b8acc3b5cf542d86020b510 245 Pfam PF00929 Exonuclease 55 223 4.0E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV2_0917 dcac40a75b8acc3b5cf542d86020b510 245 SMART SM00479 52 232 4.1E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_1271 c613880a6c10571d7608cda9bb4d56dc 122 Pfam PF04892 VanZ like family 29 106 1.8E-10 T 14-10-2018 IPR006976 VanZ-like VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 Gene3D G3DSA:1.10.10.10 14 82 4.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 SUPERFAMILY SSF53383 119 478 1.57E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 4.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 4.1E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 Gene3D G3DSA:3.40.640.10 109 472 4.1E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 Pfam PF00155 Aminotransferase class I and II 128 444 3.4E-27 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 4.5E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 SMART SM00345 22 81 3.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_0776 1b4725ae03cdc68746b6fdc301963261 485 SUPERFAMILY SSF46785 18 82 2.2E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_3131 62af996eee9eaf5364fee31c2206cfda 182 Gene3D G3DSA:3.40.109.10 1 182 4.5E-41 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VV1_3131 62af996eee9eaf5364fee31c2206cfda 182 PIRSF PIRSF000232 1 182 9.3E-62 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VV1_3131 62af996eee9eaf5364fee31c2206cfda 182 Pfam PF00881 Nitroreductase family 8 161 5.0E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VV1_3131 62af996eee9eaf5364fee31c2206cfda 182 SUPERFAMILY SSF55469 1 181 2.62E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 Gene3D G3DSA:3.30.70.3280 390 529 1.8E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 Gene3D G3DSA:3.40.50.300 110 275 6.6E-116 T 14-10-2018 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 1.1E-303 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 8.5E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 163 1.9E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 SUPERFAMILY SSF50447 262 393 3.77E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 SUPERFAMILY SSF54980 393 468 3.6E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.7E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 Gene3D G3DSA:3.40.50.300 72 379 6.6E-116 T 14-10-2018 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 SUPERFAMILY SSF52540 10 277 1.5E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.029 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VV1_1721 d27cec415e5ad1cdcc07aa03dadda16d 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 3.7E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1634 9eb4305d4854e36bf2bc66b33d2d9c57 205 Gene3D G3DSA:1.10.357.10 1 205 1.0E-92 T 14-10-2018 VV1_1634 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1634 9eb4305d4854e36bf2bc66b33d2d9c57 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1634 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF46689 8 83 8.98E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1634 9eb4305d4854e36bf2bc66b33d2d9c57 205 SUPERFAMILY SSF48498 90 197 2.06E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV1_1634 9eb4305d4854e36bf2bc66b33d2d9c57 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_2913 bd938b177ce49284abc015d74687911c 211 Gene3D G3DSA:1.10.287.1080 120 211 2.1E-29 T 14-10-2018 VV1_2913 bd938b177ce49284abc015d74687911c 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 8.0E-24 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VV1_2913 bd938b177ce49284abc015d74687911c 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 3.3E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VV1_2913 bd938b177ce49284abc015d74687911c 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VV1_2913 bd938b177ce49284abc015d74687911c 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 1.9E-17 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VV1_2913 bd938b177ce49284abc015d74687911c 211 Gene3D G3DSA:3.10.20.400 4 102 6.3E-36 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VV1_2913 bd938b177ce49284abc015d74687911c 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.56 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VV1_2913 bd938b177ce49284abc015d74687911c 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.554 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VV1_2913 bd938b177ce49284abc015d74687911c 211 SUPERFAMILY SSF101386 123 210 5.42E-25 T 14-10-2018 VV1_2913 bd938b177ce49284abc015d74687911c 211 SUPERFAMILY SSF141734 14 124 8.24E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Pfam PF01627 Hpt domain 836 917 2.4E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SUPERFAMILY SSF47226 762 916 7.07E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 2.8E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Pfam PF00072 Response regulator receiver domain 668 778 1.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SMART SM00304 198 250 3.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SUPERFAMILY SSF47384 275 356 1.04E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SUPERFAMILY SSF158472 200 247 4.84E-6 T 14-10-2018 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SUPERFAMILY SSF55874 344 517 1.02E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Gene3D G3DSA:3.40.50.2300 654 787 4.2E-39 T 14-10-2018 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SUPERFAMILY SSF52172 532 644 1.27E-5 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SMART SM00387 402 518 5.0E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 9.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Gene3D G3DSA:1.20.1480.50 164 270 1.8E-7 T 14-10-2018 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.1E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SMART SM00073 826 924 8.5E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Gene3D G3DSA:1.10.287.130 277 356 7.5E-27 T 14-10-2018 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SUPERFAMILY SSF52172 664 783 2.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Gene3D G3DSA:3.30.565.10 357 521 6.2E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SMART SM00448 666 779 7.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Gene3D G3DSA:1.20.120.160 816 928 1.6E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 8.0E-51 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal VV1_1573 1a3e1efc8e4b78782a593544b83416d7 928 SMART SM00388 290 355 3.4E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF53738 305 448 5.49E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 2.8E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 439 1.1E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF53738 26 235 3.06E-52 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF53738 209 315 4.47E-7 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 315 8.0E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.40.120.10 319 443 1.7E-35 T 14-10-2018 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 SUPERFAMILY SSF55957 433 544 2.17E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 486 538 3.9E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.30.310.50 444 547 2.2E-34 T 14-10-2018 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.40.120.10 221 318 5.6E-44 T 14-10-2018 VV1_0169 72e7664eb8b04bb0b3a8493d46a2852e 549 Gene3D G3DSA:3.40.120.10 12 218 3.5E-73 T 14-10-2018 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 Pfam PF00158 Sigma-54 interaction domain 5 168 1.5E-58 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 Pfam PF02954 Bacterial regulatory protein, Fis family 305 333 1.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_2880 57526ba44b9ab1580c752f9d01112366 345 Gene3D G3DSA:1.10.8.60 177 263 2.2E-25 T 14-10-2018 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 SUPERFAMILY SSF46689 285 341 4.3E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 SUPERFAMILY SSF52540 4 237 1.0E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2880 57526ba44b9ab1580c752f9d01112366 345 Gene3D G3DSA:1.10.10.60 267 342 1.1E-5 T 14-10-2018 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 SMART SM00382 25 177 4.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2880 57526ba44b9ab1580c752f9d01112366 345 Gene3D G3DSA:3.40.50.300 1 176 7.4E-59 T 14-10-2018 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 8.5E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 8.5E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 8.5E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 322 342 5.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 322 5.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_2880 57526ba44b9ab1580c752f9d01112366 345 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 339 3.7E-168 T 14-10-2018 IPR014317 Transcription activator PspF VV1_1978 d7f11cca6785c2b3cb31de059e78a18d 154 SUPERFAMILY SSF53254 1 144 4.71E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VV1_1978 d7f11cca6785c2b3cb31de059e78a18d 154 Gene3D G3DSA:3.40.50.1240 1 154 1.6E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VV1_1978 d7f11cca6785c2b3cb31de059e78a18d 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 1.4E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VV1_1978 d7f11cca6785c2b3cb31de059e78a18d 154 SMART SM00855 2 116 4.7E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VV1_1978 d7f11cca6785c2b3cb31de059e78a18d 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 6.7E-34 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 VV1_1436 946385006bab12c31219afecbf9bd13a 548 Gene3D G3DSA:3.55.50.30 49 145 1.9E-9 T 14-10-2018 VV1_1436 946385006bab12c31219afecbf9bd13a 548 SMART SM00965 93 141 1.9E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VV1_1436 946385006bab12c31219afecbf9bd13a 548 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 238 524 1.7E-91 T 14-10-2018 IPR013358 Pilus biogenesis, MshL VV1_1436 946385006bab12c31219afecbf9bd13a 548 Pfam PF07655 Secretin N-terminal domain 145 243 5.4E-25 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VV1_1436 946385006bab12c31219afecbf9bd13a 548 Pfam PF00263 Bacterial type II and III secretion system protein 347 524 1.1E-41 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VV1_1436 946385006bab12c31219afecbf9bd13a 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 489 507 1.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1436 946385006bab12c31219afecbf9bd13a 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 512 526 1.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1436 946385006bab12c31219afecbf9bd13a 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 1.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1436 946385006bab12c31219afecbf9bd13a 548 PRINTS PR00811 Bacterial general secretion pathway protein D signature 342 366 1.0E-18 T 14-10-2018 IPR001775 GspD/PilQ family VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Gene3D G3DSA:3.30.70.380 702 795 8.8E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SUPERFAMILY SSF54991 697 794 8.11E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SMART SM00896 701 794 9.4E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SUPERFAMILY SSF55681 467 689 2.78E-54 T 14-10-2018 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.7E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Gene3D G3DSA:3.30.56.10 401 475 2.5E-25 T 14-10-2018 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.239 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.8E-28 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SUPERFAMILY SSF50249 38 197 2.94E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Gene3D G3DSA:3.30.56.10 7 179 3.1E-69 T 14-10-2018 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.0E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SMART SM00874 403 471 1.7E-28 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SUPERFAMILY SSF56037 195 394 1.62E-76 T 14-10-2018 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 4.7E-277 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Gene3D G3DSA:2.40.50.140 39 154 3.1E-69 T 14-10-2018 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Gene3D G3DSA:3.30.930.10 485 691 5.8E-63 T 14-10-2018 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SUPERFAMILY SSF46955 403 475 1.37E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 SMART SM00873 212 385 3.2E-99 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Gene3D G3DSA:3.50.40.10 197 395 5.2E-82 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VV1_2371 c2bb51f6b5c86055a9c4652b2d8ec516 795 Pfam PF03483 B3/4 domain 212 385 1.9E-70 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VV1_2794 550914d71d9ecb62d42cf80c0b9b6661 225 Pfam PF04172 LrgB-like family 6 218 7.9E-72 T 14-10-2018 IPR007300 CidB/LrgB family VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 SUPERFAMILY SSF55174 19 71 3.01E-9 T 14-10-2018 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 SUPERFAMILY SSF55120 96 312 1.76E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 3.2E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 312 1.5E-92 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 Pfam PF01479 S4 domain 20 66 5.9E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 SMART SM00363 20 77 2.2E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 Gene3D G3DSA:3.10.290.10 8 74 5.7E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_3016 52f27cb0fc8fc43e29ef496fa446812f 315 Gene3D G3DSA:3.30.2350.10 93 315 3.4E-81 T 14-10-2018 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 SUPERFAMILY SSF55874 485 647 1.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2578 f1caac07664885b189aa63331cd29f1e 660 SUPERFAMILY SSF47384 423 492 3.92E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 Gene3D G3DSA:3.30.565.10 502 656 1.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2578 f1caac07664885b189aa63331cd29f1e 660 Pfam PF00512 His Kinase A (phospho-acceptor) domain 428 493 2.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 SMART SM00387 538 649 5.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2578 f1caac07664885b189aa63331cd29f1e 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 648 2.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2578 f1caac07664885b189aa63331cd29f1e 660 Pfam PF17202 Single cache domain 3 184 297 1.5E-26 T 14-10-2018 IPR033463 Single cache domain 3 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 SUPERFAMILY SSF103190 124 290 1.3E-14 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_2578 f1caac07664885b189aa63331cd29f1e 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 608 7.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 594 7.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 7.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 7.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 SMART SM00388 428 495 9.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2578 f1caac07664885b189aa63331cd29f1e 660 Gene3D G3DSA:1.10.287.130 420 493 4.2E-21 T 14-10-2018 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 PIRSF PIRSF001400 1 430 1.9E-190 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.2E-206 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 Hamap MF_00318 Enolase [eno]. 2 417 44.279 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 Gene3D G3DSA:3.20.20.120 128 433 1.6E-131 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VV1_1579 3fb335023432720a3fe5fe1093272e53 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.5E-135 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 SMART SM01192 143 431 6.3E-212 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 Pfam PF03952 Enolase, N-terminal domain 4 134 3.2E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 SMART SM01193 4 134 1.7E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 SUPERFAMILY SSF51604 143 428 2.69E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VV1_1579 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 SUPERFAMILY SSF54826 3 138 4.12E-56 T 14-10-2018 VV1_1579 3fb335023432720a3fe5fe1093272e53 433 Gene3D G3DSA:3.30.390.10 1 127 6.7E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 508 536 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 Pfam PF01464 Transglycosylase SLT domain 492 604 7.5E-30 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 SUPERFAMILY SSF48435 36 484 3.53E-127 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 Gene3D G3DSA:1.10.530.10 480 651 5.6E-50 T 14-10-2018 VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 Gene3D G3DSA:1.25.20.10 36 397 2.3E-99 T 14-10-2018 VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 Gene3D G3DSA:1.10.1240.20 413 479 2.5E-22 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 SUPERFAMILY SSF53955 487 645 1.06E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_0490 4f46700b8d3a0b32aa65d9b77cd85fdc 651 Pfam PF14718 Soluble lytic murein transglycosylase L domain 414 479 1.6E-23 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VV1_2316 5fc2253d2f45e5fd11a366dbcb59888a 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 1.3E-16 T 14-10-2018 IPR000182 GNAT domain VV1_2316 5fc2253d2f45e5fd11a366dbcb59888a 179 SUPERFAMILY SSF55729 3 158 1.77E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2316 5fc2253d2f45e5fd11a366dbcb59888a 179 Gene3D G3DSA:3.40.630.30 1 168 8.3E-26 T 14-10-2018 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 Gene3D G3DSA:2.40.33.10 70 170 3.4E-141 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 Gene3D G3DSA:3.40.1380.20 340 472 3.4E-141 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 1.1E-147 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 PRINTS PR01050 Pyruvate kinase family signature 221 247 6.2E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 PRINTS PR01050 Pyruvate kinase family signature 248 272 6.2E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 PRINTS PR01050 Pyruvate kinase family signature 298 316 6.2E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 PRINTS PR01050 Pyruvate kinase family signature 59 75 6.2E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 PRINTS PR01050 Pyruvate kinase family signature 317 333 6.2E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 PRINTS PR01050 Pyruvate kinase family signature 188 202 6.2E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 PRINTS PR01050 Pyruvate kinase family signature 273 297 6.2E-53 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 441 1.8E-8 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 SUPERFAMILY SSF51621 3 345 7.07E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 Gene3D G3DSA:3.20.20.60 3 339 3.4E-141 T 14-10-2018 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 1.8E-125 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 SUPERFAMILY SSF52935 350 477 5.19E-21 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0206 b6d7640eeddac66a2c327452526d27c6 489 SUPERFAMILY SSF50800 71 168 2.27E-23 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 Pfam PF13533 Biotin-lipoyl like 71 114 2.3E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 Pfam PF13437 HlyD family secretion protein 165 263 6.1E-8 T 14-10-2018 VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 Gene3D G3DSA:1.10.287.470 101 160 8.5E-72 T 14-10-2018 VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 Gene3D G3DSA:2.40.420.20 281 361 8.5E-72 T 14-10-2018 VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 Gene3D G3DSA:2.40.50.100 67 199 8.5E-72 T 14-10-2018 VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 363 8.3E-70 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 SUPERFAMILY SSF111369 60 274 8.37E-29 T 14-10-2018 VV1_2875 1620b118aba1f50716f0a1f36b3df007 371 Gene3D G3DSA:2.40.30.170 54 279 8.5E-72 T 14-10-2018 VV1_1165 c92f6c9793e673e1c38d9537d47e485a 809 PIRSF PIRSF000437 19 809 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VV1_1165 c92f6c9793e673e1c38d9537d47e485a 809 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VV1_1165 c92f6c9793e673e1c38d9537d47e485a 809 SUPERFAMILY SSF69593 281 488 4.71E-25 T 14-10-2018 VV1_1165 c92f6c9793e673e1c38d9537d47e485a 809 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.593 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VV1_1165 c92f6c9793e673e1c38d9537d47e485a 809 Pfam PF01553 Acyltransferase 289 424 9.2E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_1165 c92f6c9793e673e1c38d9537d47e485a 809 PIRSF PIRSF500064 3 809 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VV1_1165 c92f6c9793e673e1c38d9537d47e485a 809 SMART SM00563 300 427 3.2E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_1309 614937f7cd9fd6af6c0ef8dc8f21ccb8 1046 SUPERFAMILY SSF56219 508 898 1.41E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV1_1309 614937f7cd9fd6af6c0ef8dc8f21ccb8 1046 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 537 892 3.0E-6 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 354 5.6E-121 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 8.7E-38 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 Gene3D G3DSA:3.40.50.300 8 332 9.4E-84 T 14-10-2018 VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.592 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 SUPERFAMILY SSF52540 1 344 3.59E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 Gene3D G3DSA:1.20.1050.90 121 298 9.4E-84 T 14-10-2018 VV1_0997 4a8125069975f4cd3bd6ea21bfa11ae6 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VV2_0617 96c4bec76862999f170698efb86e1bd6 173 Pfam PF00588 SpoU rRNA Methylase family 7 140 1.3E-19 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV2_0617 96c4bec76862999f170698efb86e1bd6 173 Gene3D G3DSA:3.40.1280.10 7 152 1.6E-19 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV2_0617 96c4bec76862999f170698efb86e1bd6 173 SUPERFAMILY SSF75217 5 145 2.03E-27 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 SUPERFAMILY SSF53901 14 293 1.0E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 SUPERFAMILY SSF53901 296 434 6.51E-30 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 1.0E-273 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 4.8E-35 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 2.4E-61 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 3.6E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 Gene3D G3DSA:3.40.47.10 4 434 1.6E-108 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.708 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VV1_1975 d5d2e72b5d5fa5a3bcc9aa125501d25b 435 PIRSF PIRSF000429 8 435 1.1E-118 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.715 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 150 1.1E-18 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 Gene3D G3DSA:2.30.30.20 101 153 1.6E-23 T 14-10-2018 VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 SUPERFAMILY SSF54893 2 100 1.44E-35 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 SUPERFAMILY SSF57825 101 151 5.1E-16 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.9E-59 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 Gene3D G3DSA:3.30.70.140 1 100 1.2E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VV1_1464 7d7fea41816612cb95d73dfc229f4541 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.6E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VV1_2391 6fbb713edced54135a5608ba696bbe09 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 44.496 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VV1_2391 6fbb713edced54135a5608ba696bbe09 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 1.1E-115 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VV1_2391 6fbb713edced54135a5608ba696bbe09 336 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV1_2391 6fbb713edced54135a5608ba696bbe09 336 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV1_2391 6fbb713edced54135a5608ba696bbe09 336 SUPERFAMILY SSF52768 13 330 7.56E-85 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VV1_2391 6fbb713edced54135a5608ba696bbe09 336 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VV1_2391 6fbb713edced54135a5608ba696bbe09 336 Gene3D G3DSA:3.40.800.10 5 336 4.2E-129 T 14-10-2018 VV1_2391 6fbb713edced54135a5608ba696bbe09 336 Pfam PF00491 Arginase family 46 325 3.4E-61 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV1_2391 6fbb713edced54135a5608ba696bbe09 336 PIRSF PIRSF036979 26 333 6.9E-25 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 SUPERFAMILY SSF56601 12 284 5.88E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 374 2.0E-27 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 264 9.9E-93 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 3.5E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 3.5E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 3.5E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 SUPERFAMILY SSF69189 284 376 9.22E-28 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 SMART SM00936 284 374 1.4E-37 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 Gene3D G3DSA:3.40.710.10 34 284 1.5E-90 T 14-10-2018 VV1_0281 1e410d161e0d185618847a71ec3a54b4 393 Gene3D G3DSA:2.60.410.10 285 374 1.2E-30 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_1220 d04441e469699f27ea042842ad47ee7f 197 SMART SM00986 27 183 1.5E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_1220 d04441e469699f27ea042842ad47ee7f 197 SUPERFAMILY SSF52141 3 190 1.01E-55 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_1220 d04441e469699f27ea042842ad47ee7f 197 Gene3D G3DSA:3.40.470.10 1 193 5.2E-72 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_1220 d04441e469699f27ea042842ad47ee7f 197 SMART SM00987 27 183 1.5E-31 T 14-10-2018 VV1_1220 d04441e469699f27ea042842ad47ee7f 197 Pfam PF03167 Uracil DNA glycosylase superfamily 31 179 1.2E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_2064 926a0181d456f4ae43264ee8dac97f26 252 Gene3D G3DSA:3.40.50.1580 1 252 2.7E-81 T 14-10-2018 VV1_2064 926a0181d456f4ae43264ee8dac97f26 252 Pfam PF01048 Phosphorylase superfamily 20 240 4.6E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV1_2064 926a0181d456f4ae43264ee8dac97f26 252 SUPERFAMILY SSF53167 4 251 1.57E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VV1_2064 926a0181d456f4ae43264ee8dac97f26 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_2064 926a0181d456f4ae43264ee8dac97f26 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 2.2E-110 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VV2_0074 074dfcbbdfa8ba4996bb7cde16f2ba9b 117 Pfam PF01740 STAS domain 9 91 9.9E-6 T 14-10-2018 IPR002645 STAS domain VV2_0074 074dfcbbdfa8ba4996bb7cde16f2ba9b 117 SUPERFAMILY SSF52091 3 98 1.96E-11 T 14-10-2018 IPR036513 STAS domain superfamily VV2_0074 074dfcbbdfa8ba4996bb7cde16f2ba9b 117 Gene3D G3DSA:3.30.750.24 3 117 3.2E-20 T 14-10-2018 IPR036513 STAS domain superfamily VV1_0292 e09b209a1016579b13fc1118e82e1895 344 Gene3D G3DSA:3.40.50.300 1 232 4.0E-75 T 14-10-2018 VV1_0292 e09b209a1016579b13fc1118e82e1895 344 SUPERFAMILY SSF52540 1 239 1.69E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0292 e09b209a1016579b13fc1118e82e1895 344 Pfam PF00005 ABC transporter 21 169 1.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0292 e09b209a1016579b13fc1118e82e1895 344 Gene3D G3DSA:3.30.70.260 244 344 7.2E-41 T 14-10-2018 VV1_0292 e09b209a1016579b13fc1118e82e1895 344 SUPERFAMILY SSF55021 248 343 4.92E-26 T 14-10-2018 VV1_0292 e09b209a1016579b13fc1118e82e1895 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0292 e09b209a1016579b13fc1118e82e1895 344 Pfam PF09383 NIL domain 268 339 2.0E-21 T 14-10-2018 IPR018449 NIL domain VV1_0292 e09b209a1016579b13fc1118e82e1895 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.2E-199 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VV1_0292 e09b209a1016579b13fc1118e82e1895 344 SMART SM00382 30 235 7.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0292 e09b209a1016579b13fc1118e82e1895 344 SMART SM00930 265 340 1.5E-29 T 14-10-2018 IPR018449 NIL domain VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 SUPERFAMILY SSF54631 140 272 7.71E-15 T 14-10-2018 VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 SMART SM00924 34 137 3.5E-9 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 SUPERFAMILY SSF158791 34 132 3.27E-12 T 14-10-2018 VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 Pfam PF01769 Divalent cation transporter 319 440 7.8E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 Gene3D G3DSA:3.10.580.10 133 258 7.5E-34 T 14-10-2018 VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 Gene3D G3DSA:1.10.357.20 274 447 1.5E-47 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 SUPERFAMILY SSF161093 276 447 2.62E-47 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VV2_0785 63f3ce24cd20e4e1e01fb5224a5e8e0a 448 Pfam PF03448 MgtE intracellular N domain 36 135 2.5E-13 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VV1_3141 8805cb3bb38cddc8ddae0486883a8c69 294 PIRSF PIRSF016020 5 294 8.2E-62 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VV1_3141 8805cb3bb38cddc8ddae0486883a8c69 294 Gene3D G3DSA:2.70.98.10 2 293 7.4E-85 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VV1_3141 8805cb3bb38cddc8ddae0486883a8c69 294 SUPERFAMILY SSF74650 6 288 4.4E-75 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VV1_3141 8805cb3bb38cddc8ddae0486883a8c69 294 Pfam PF01263 Aldose 1-epimerase 27 291 4.8E-51 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 Pfam PF04055 Radical SAM superfamily 172 349 1.4E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 35 464 1.4E-185 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 Gene3D G3DSA:3.80.30.20 164 405 2.2E-72 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 SUPERFAMILY SSF102114 145 396 2.88E-52 T 14-10-2018 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 Pfam PF00919 Uncharacterized protein family UPF0004 35 119 7.0E-22 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 Gene3D G3DSA:3.40.50.12160 34 162 6.2E-31 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 SMART SM00729 166 391 1.1E-51 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 34 466 63.146 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 35 464 3.8E-108 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 170 190 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VV2_1254 94b2a2bb0e4877594f26f3a10ab5c84b 469 Gene3D G3DSA:2.40.50.140 406 469 2.7E-23 T 14-10-2018 VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00072 Response regulator receiver domain 7 117 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF52172 3 126 4.41E-42 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00448 5 116 6.1E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 SUPERFAMILY SSF46894 132 234 1.47E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:1.10.10.10 130 238 3.1E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 SMART SM00862 156 232 8.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0858 11f0cc8fedfbcd10aa010c51c3ec291f 239 Gene3D G3DSA:3.40.50.2300 1 125 4.9E-40 T 14-10-2018 VV2_0602 92b1e3beebd29271ea148cdef26daba0 357 Pfam PF12706 Beta-lactamase superfamily domain 109 302 9.6E-42 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0602 92b1e3beebd29271ea148cdef26daba0 357 Gene3D G3DSA:3.60.15.10 70 349 4.8E-79 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_0602 92b1e3beebd29271ea148cdef26daba0 357 SUPERFAMILY SSF56281 93 320 1.78E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 4.0E-69 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.230.10 75 167 5.2E-36 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 Gene3D G3DSA:3.30.160.20 2 74 4.0E-32 T 14-10-2018 VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 2.7E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54768 8 76 4.08E-24 T 14-10-2018 VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.9E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.696 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV1_0743 c616a9c7dd2fbae50df050b059a3a974 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 Pfam PF05746 DALR anticodon binding domain 585 682 2.4E-9 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 2.0E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 2.0E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 2.0E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 2.0E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 2.0E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 692 6.8E-294 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 SUPERFAMILY SSF109604 351 489 9.73E-12 T 14-10-2018 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 691 25.756 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0990 e1c03d5e99876e580abd6761c11cd1d3 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 554 9.4E-204 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 PIRSF PIRSF000148 4 337 1.2E-131 T 14-10-2018 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 Gene3D G3DSA:3.30.360.10 130 316 1.8E-150 T 14-10-2018 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 SUPERFAMILY SSF55347 131 320 3.27E-77 T 14-10-2018 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 Gene3D G3DSA:3.40.50.720 7 330 1.8E-150 T 14-10-2018 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.5E-127 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.373 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 SUPERFAMILY SSF51735 5 159 5.15E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 SMART SM00859 6 121 1.5E-41 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.4E-61 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1989 1935ef4619bd21e44fc152752ce0f6d2 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 3.8E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV1_1362 4bc42f11129d3d17d58130117abfe0a2 105 SUPERFAMILY SSF47598 3 103 4.0E-57 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VV1_1362 4bc42f11129d3d17d58130117abfe0a2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.2E-59 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VV1_1362 4bc42f11129d3d17d58130117abfe0a2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-49 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VV1_1362 4bc42f11129d3d17d58130117abfe0a2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.305 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VV1_1362 4bc42f11129d3d17d58130117abfe0a2 105 Gene3D G3DSA:1.10.140.10 2 105 2.1E-56 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 SUPERFAMILY SSF100950 74 234 2.16E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 Gene3D G3DSA:3.30.750.70 70 140 1.0E-5 T 14-10-2018 VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 SUPERFAMILY SSF46785 4 61 7.86E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 Pfam PF00455 DeoR C terminal sensor domain 75 233 1.2E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 SMART SM01134 73 234 1.0E-66 T 14-10-2018 VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 SMART SM00420 6 58 3.9E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 Gene3D G3DSA:1.10.10.10 1 53 4.6E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1026 f4b16e0def807c89e0bb4f9324207fd6 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 3.4E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_2854 ee30288d501fa74b87ce85500ab89b5c 540 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 531 1.6E-39 T 14-10-2018 IPR000160 GGDEF domain VV1_2854 ee30288d501fa74b87ce85500ab89b5c 540 Gene3D G3DSA:3.30.70.270 360 534 6.7E-52 T 14-10-2018 VV1_2854 ee30288d501fa74b87ce85500ab89b5c 540 SUPERFAMILY SSF55073 381 532 1.47E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2854 ee30288d501fa74b87ce85500ab89b5c 540 SMART SM00267 363 533 7.8E-54 T 14-10-2018 IPR000160 GGDEF domain VV1_2854 ee30288d501fa74b87ce85500ab89b5c 540 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 528 4.0E-44 T 14-10-2018 IPR000160 GGDEF domain VV1_2854 ee30288d501fa74b87ce85500ab89b5c 540 Gene3D G3DSA:3.30.450.20 155 277 9.0E-16 T 14-10-2018 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 5.6E-197 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 Gene3D G3DSA:3.90.226.10 94 314 6.5E-162 T 14-10-2018 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 5.7E-50 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 PIRSF PIRSF001217 8 616 2.3E-235 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 SUPERFAMILY SSF52096 324 529 4.97E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 Gene3D G3DSA:3.90.226.10 315 539 6.5E-162 T 14-10-2018 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 Pfam PF01343 Peptidase family S49 391 541 1.9E-44 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 Pfam PF01343 Peptidase family S49 138 295 2.6E-30 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 SUPERFAMILY SSF52096 39 284 1.09E-28 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_3133 6fb43679dd52ae90baabda4a45b69482 616 Gene3D G3DSA:3.40.1750.10 186 497 6.5E-162 T 14-10-2018 VV1_0407 19faafa780620fe3c79e75730d39fe9f 375 Pfam PF02222 ATP-grasp domain 119 187 2.2E-4 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VV1_0407 19faafa780620fe3c79e75730d39fe9f 375 SUPERFAMILY SSF56059 120 310 4.65E-9 T 14-10-2018 VV1_2101 6687ca2c0b35af4e193c103f086c4d9e 256 Gene3D G3DSA:3.40.50.300 4 255 7.1E-74 T 14-10-2018 VV1_2101 6687ca2c0b35af4e193c103f086c4d9e 256 PIRSF PIRSF039085 3 256 4.2E-119 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VV1_2101 6687ca2c0b35af4e193c103f086c4d9e 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2101 6687ca2c0b35af4e193c103f086c4d9e 256 SMART SM00382 31 229 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2101 6687ca2c0b35af4e193c103f086c4d9e 256 SUPERFAMILY SSF52540 7 251 9.22E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2101 6687ca2c0b35af4e193c103f086c4d9e 256 Pfam PF00005 ABC transporter 22 181 9.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2721 f592c616db0dc87b97b8650ae2286339 224 Pfam PF13394 4Fe-4S single cluster domain 25 137 8.5E-11 T 14-10-2018 VV1_2721 f592c616db0dc87b97b8650ae2286339 224 SUPERFAMILY SSF102114 27 122 7.59E-7 T 14-10-2018 VV1_2721 f592c616db0dc87b97b8650ae2286339 224 PIRSF PIRSF000370 2 224 1.8E-70 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VV1_2721 f592c616db0dc87b97b8650ae2286339 224 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 10 223 2.0E-110 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VV1_2721 f592c616db0dc87b97b8650ae2286339 224 Gene3D G3DSA:3.20.20.70 3 224 1.1E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2721 f592c616db0dc87b97b8650ae2286339 224 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 224 33.502 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VV1_2721 f592c616db0dc87b97b8650ae2286339 224 Pfam PF04055 Radical SAM superfamily 27 124 2.5E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 SUPERFAMILY SSF53383 7 424 4.9E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 425 49.543 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 Gene3D G3DSA:3.90.1150.10 11 416 7.5E-170 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 422 3.8E-178 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 Gene3D G3DSA:3.40.640.10 62 331 7.5E-170 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 Pfam PF00202 Aminotransferase class-III 28 422 6.1E-130 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_2944 f7e1a9960881d2e2e4441abbed817391 429 PIRSF PIRSF000521 26 425 9.4E-39 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_1704 5ae7731f58431e75de3f3b126326163d 250 SUPERFAMILY SSF103491 60 154 8.89E-6 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV2_1190 cc5ef2c09c5efb55819336e0319bd7ee 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 249 8.2E-37 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VV2_1190 cc5ef2c09c5efb55819336e0319bd7ee 256 PIRSF PIRSF028205 1 253 4.1E-117 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VV2_1190 cc5ef2c09c5efb55819336e0319bd7ee 256 Gene3D G3DSA:2.50.20.10 20 250 3.8E-37 T 14-10-2018 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 Pfam PF02436 Conserved carboxylase domain 294 494 1.8E-57 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 590 6.6E-267 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 Gene3D G3DSA:2.40.50.100 520 596 5.0E-24 T 14-10-2018 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 552 569 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 Pfam PF00364 Biotin-requiring enzyme 530 594 9.6E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VV1_1601 67fca410b4d0bbea21036473fe476edd 596 SUPERFAMILY SSF51230 521 595 2.88E-21 T 14-10-2018 IPR011053 Single hybrid motif VV1_1601 67fca410b4d0bbea21036473fe476edd 596 SUPERFAMILY SSF89000 299 464 6.67E-50 T 14-10-2018 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 SUPERFAMILY SSF51569 1 302 1.37E-90 T 14-10-2018 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 Gene3D G3DSA:3.20.20.70 1 466 2.8E-173 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1601 67fca410b4d0bbea21036473fe476edd 596 Pfam PF00682 HMGL-like 8 272 1.2E-59 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 SUPERFAMILY SSF46565 1 73 7.59E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 Gene3D G3DSA:1.20.1280.20 80 171 1.2E-28 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 Gene3D G3DSA:1.10.287.110 1 79 2.1E-23 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 SMART SM00271 1 66 3.4E-10 T 14-10-2018 IPR001623 DnaJ domain VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 7.0E-21 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 SUPERFAMILY SSF47144 78 170 8.76E-26 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 7.4E-42 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.714 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_0435 d6c0dfbf2d6c6d7d184a18da52595dec 171 Pfam PF00226 DnaJ domain 2 70 7.5E-8 T 14-10-2018 IPR001623 DnaJ domain VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 Gene3D G3DSA:2.60.98.20 154 315 2.7E-23 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.2E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 2.3E-98 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 8.4E-16 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 PRINTS PR01005 Flagellar hook-associated protein signature 8 31 6.4E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 PRINTS PR01005 Flagellar hook-associated protein signature 239 261 6.4E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 8.3E-24 T 14-10-2018 IPR011491 Flagellar hook protein FlgE VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 SUPERFAMILY SSF117143 78 395 1.03E-72 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VV1_0223 89b4c4d2f3aff6674ee41226f69378be 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VV1_2065 dd0310852443d068231227fdc1f0e74e 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 8.2E-169 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 VV1_2065 dd0310852443d068231227fdc1f0e74e 386 Gene3D G3DSA:3.40.1350.10 251 376 2.7E-78 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VV1_2065 dd0310852443d068231227fdc1f0e74e 386 SUPERFAMILY SSF52980 1 382 6.97E-121 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VV1_2065 dd0310852443d068231227fdc1f0e74e 386 Gene3D G3DSA:1.10.10.680 169 250 2.7E-78 T 14-10-2018 VV1_2065 dd0310852443d068231227fdc1f0e74e 386 Gene3D G3DSA:3.40.50.10770 1 140 1.0E-58 T 14-10-2018 VV2_1610 7dc10f223bebc64c45789f4acd3ed605 343 Gene3D G3DSA:1.10.3470.10 5 342 6.1E-101 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1610 7dc10f223bebc64c45789f4acd3ed605 343 SUPERFAMILY SSF81345 6 337 9.94E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1610 7dc10f223bebc64c45789f4acd3ed605 343 Pfam PF01032 FecCD transport family 19 336 2.0E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:3.30.70.1430 40 794 9.9E-289 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 SUPERFAMILY SSF82693 553 650 8.89E-22 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:3.30.70.1440 648 843 9.9E-289 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 SUPERFAMILY SSF82866 782 1008 2.88E-46 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 SUPERFAMILY SSF82866 290 489 5.89E-47 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:3.30.2090.10 178 268 9.9E-289 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.2E-75 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 SUPERFAMILY SSF82693 41 130 2.25E-23 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 2.4E-277 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 SUPERFAMILY SSF82693 136 323 1.22E-21 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:3.30.70.1430 555 647 9.9E-289 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:1.20.1640.10 501 1001 9.9E-289 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 SUPERFAMILY SSF82714 701 783 1.96E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_1079 dcdae049443f6e100564c52ab770321b 1039 SUPERFAMILY SSF82714 182 263 4.71E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:3.30.70.1320 134 325 9.9E-289 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:1.20.1640.10 10 500 9.9E-289 T 14-10-2018 VV1_1079 dcdae049443f6e100564c52ab770321b 1039 Gene3D G3DSA:3.30.2090.10 698 786 9.9E-289 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 Gene3D G3DSA:3.30.1490.20 142 211 7.4E-91 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 121 6.4E-21 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 Hamap MF_00162 Glutathione synthetase [gshB]. 1 325 99.051 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 Gene3D G3DSA:3.40.50.20 6 115 7.4E-91 T 14-10-2018 VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 SUPERFAMILY SSF56059 125 321 2.75E-43 T 14-10-2018 VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 306 3.2E-59 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 SUPERFAMILY SSF52440 1 121 5.18E-24 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV2_1204 75f382a5984b20c1356e736d5f2cf0b7 346 Gene3D G3DSA:3.30.470.20 116 304 7.4E-91 T 14-10-2018 VV1_0617 57a2bd3ca7dcce7a5fe17873ab654b99 505 Pfam PF05235 CHAD domain 231 433 1.7E-8 T 14-10-2018 IPR007899 CHAD domain VV1_0617 57a2bd3ca7dcce7a5fe17873ab654b99 505 SMART SM01118 2 203 3.6E-43 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VV1_0617 57a2bd3ca7dcce7a5fe17873ab654b99 505 Gene3D G3DSA:1.40.20.10 214 492 5.4E-10 T 14-10-2018 IPR038186 CHAD domain superfamily VV1_0617 57a2bd3ca7dcce7a5fe17873ab654b99 505 Gene3D G3DSA:2.40.320.10 1 198 2.8E-35 T 14-10-2018 VV1_0617 57a2bd3ca7dcce7a5fe17873ab654b99 505 SMART SM00880 229 497 4.8E-29 T 14-10-2018 IPR007899 CHAD domain VV1_0617 57a2bd3ca7dcce7a5fe17873ab654b99 505 SUPERFAMILY SSF55154 1 214 8.67E-50 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VV1_0617 57a2bd3ca7dcce7a5fe17873ab654b99 505 Pfam PF01928 CYTH domain 3 197 9.6E-34 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VV1_2765 b9e0d3b1abcea2029295848b4b152214 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 7.8E-79 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 VV1_2765 b9e0d3b1abcea2029295848b4b152214 222 Gene3D G3DSA:1.20.1050.10 90 222 1.6E-41 T 14-10-2018 VV1_2765 b9e0d3b1abcea2029295848b4b152214 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 83 7.6E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV1_2765 b9e0d3b1abcea2029295848b4b152214 222 SUPERFAMILY SSF47616 95 219 4.35E-20 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV1_2765 b9e0d3b1abcea2029295848b4b152214 222 SUPERFAMILY SSF52833 4 89 6.73E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_2765 b9e0d3b1abcea2029295848b4b152214 222 Gene3D G3DSA:3.40.30.10 7 83 1.6E-24 T 14-10-2018 VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 Pfam PF00664 ABC transporter transmembrane region 30 312 2.6E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 Gene3D G3DSA:1.20.1560.10 11 340 6.8E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 SUPERFAMILY SSF52540 357 592 1.17E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 SUPERFAMILY SSF90123 12 345 2.22E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 Gene3D G3DSA:3.40.50.300 353 599 1.8E-81 T 14-10-2018 VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 SMART SM00382 385 572 6.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2646 feef8eafe4a59645a5280784dc88a20b 599 Pfam PF00005 ABC transporter 376 524 3.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.1E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 PIRSF PIRSF006809 3 423 1.4E-151 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 Gene3D G3DSA:3.40.50.11060 18 138 1.0E-36 T 14-10-2018 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.581 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF54980 365 428 3.88E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 Gene3D G3DSA:3.40.50.300 197 369 2.2E-42 T 14-10-2018 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.5E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 SUPERFAMILY SSF52540 197 371 1.46E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.0E-155 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_1295 04ae93e77955ac0ce323422e58cc7883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV2_0904 246f4ec5ba8042b76903916bc7d434e9 207 SUPERFAMILY SSF51569 3 205 6.23E-66 T 14-10-2018 VV2_0904 246f4ec5ba8042b76903916bc7d434e9 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 204 4.6E-82 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV2_0904 246f4ec5ba8042b76903916bc7d434e9 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV2_0904 246f4ec5ba8042b76903916bc7d434e9 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV2_0904 246f4ec5ba8042b76903916bc7d434e9 207 Pfam PF01081 KDPG and KHG aldolase 6 197 6.6E-71 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV2_0904 246f4ec5ba8042b76903916bc7d434e9 207 Gene3D G3DSA:3.20.20.70 1 206 1.3E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1052 a43e1943d3dae14865c6f980666e777e 160 Pfam PF01037 Lrp/AsnC ligand binding domain 79 149 1.3E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV2_1052 a43e1943d3dae14865c6f980666e777e 160 Gene3D G3DSA:1.10.10.10 1 62 1.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1052 a43e1943d3dae14865c6f980666e777e 160 SMART SM00344 11 120 5.3E-34 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV2_1052 a43e1943d3dae14865c6f980666e777e 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 2.6E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1052 a43e1943d3dae14865c6f980666e777e 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 2.6E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1052 a43e1943d3dae14865c6f980666e777e 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 2.6E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1052 a43e1943d3dae14865c6f980666e777e 160 Gene3D G3DSA:3.30.70.920 63 155 1.6E-18 T 14-10-2018 VV2_1052 a43e1943d3dae14865c6f980666e777e 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 1.2E-18 T 14-10-2018 VV2_1052 a43e1943d3dae14865c6f980666e777e 160 SUPERFAMILY SSF46785 10 71 7.05E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1052 a43e1943d3dae14865c6f980666e777e 160 SUPERFAMILY SSF54909 71 159 1.47E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.30.70.3380 368 478 6.5E-39 T 14-10-2018 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF54980 399 493 1.97E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 SMART SM00838 398 486 0.0072 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.8E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF54980 292 370 2.09E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF52540 2 205 1.86E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 3.2E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.30.70.2570 479 553 5.3E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 6.0E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:2.40.30.10 186 285 3.7E-34 T 14-10-2018 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 304.867 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 SUPERFAMILY SSF50447 165 288 3.31E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF00679 Elongation factor G C-terminus 399 483 6.9E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.3E-299 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.40.50.300 1 185 7.5E-71 T 14-10-2018 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.7E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_1563 bae814a04a4f042571bfad8080edb8d8 597 Gene3D G3DSA:3.30.70.870 286 367 2.3E-35 T 14-10-2018 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 Pfam PF02096 60Kd inner membrane protein 350 529 6.3E-63 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 320 340 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 458 480 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 411 434 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 70 91 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 495 518 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 160 180 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 248 263 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR00701 60kDa inner membrane protein signature 213 231 6.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 349 528 2.3E-72 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 531 25.794 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR01900 YidC translocation/secretion protein signature 484 508 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR01900 YidC translocation/secretion protein signature 335 351 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 PRINTS PR01900 YidC translocation/secretion protein signature 464 479 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 Pfam PF14849 YidC periplasmic domain 65 339 2.9E-83 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 348 5.2E-111 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal VV1_1007 424217cb9b21c69c267f48d78e83cd32 539 Gene3D G3DSA:2.70.98.90 60 329 1.8E-88 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily VV1_2407 bd332ce167ff1a2025f68a943cae0ecc 274 Pfam PF14337 Domain of unknown function (DUF4393) 78 267 4.1E-50 T 14-10-2018 IPR025506 Protein of unknown function DUF4393 VV1_2407 bd332ce167ff1a2025f68a943cae0ecc 274 Gene3D G3DSA:1.10.10.2280 125 273 6.6E-12 T 14-10-2018 VV1_2292 710f6094f55c134e5b9bcce247df9d95 304 Gene3D G3DSA:3.40.50.10330 3 133 2.8E-30 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VV1_2292 710f6094f55c134e5b9bcce247df9d95 304 SUPERFAMILY SSF111331 5 303 2.4E-54 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VV1_2292 710f6094f55c134e5b9bcce247df9d95 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 127 6.9E-24 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VV1_2292 710f6094f55c134e5b9bcce247df9d95 304 Gene3D G3DSA:2.60.200.40 136 293 1.6E-23 T 14-10-2018 VV1_2292 710f6094f55c134e5b9bcce247df9d95 304 SMART SM00046 5 135 3.0E-5 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 SUPERFAMILY SSF50447 243 371 7.07E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 SUPERFAMILY SSF52540 2 259 2.13E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 SMART SM00889 458 576 3.0E-55 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Gene3D G3DSA:3.40.50.300 2 264 2.6E-52 T 14-10-2018 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Gene3D G3DSA:3.30.230.10 463 666 1.1E-77 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 SUPERFAMILY SSF54980 581 669 1.44E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Gene3D G3DSA:2.40.30.10 268 383 2.6E-22 T 14-10-2018 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 4.2E-28 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 SMART SM00838 578 666 2.3E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 SUPERFAMILY SSF54211 457 577 6.07E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Pfam PF00679 Elongation factor G C-terminus 579 665 2.0E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Pfam PF03764 Elongation factor G, domain IV 457 575 2.2E-38 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Gene3D G3DSA:3.30.70.870 384 461 2.9E-23 T 14-10-2018 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Gene3D G3DSA:3.30.70.240 582 653 1.1E-77 T 14-10-2018 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 SUPERFAMILY SSF54980 380 457 4.68E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 142 2.3E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV2_0942 7e03844add39c47a15314d5f2cbe2d69 672 Pfam PF14492 Elongation Factor G, domain II 382 455 3.2E-24 T 14-10-2018 VV1_0701 2df6f2a9c0dc72d5cc0c5ad252b43dcb 234 SUPERFAMILY SSF52540 1 231 9.53E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0701 2df6f2a9c0dc72d5cc0c5ad252b43dcb 234 SMART SM00382 24 207 1.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0701 2df6f2a9c0dc72d5cc0c5ad252b43dcb 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 9.7E-102 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 VV1_0701 2df6f2a9c0dc72d5cc0c5ad252b43dcb 234 Pfam PF00005 ABC transporter 18 157 3.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0701 2df6f2a9c0dc72d5cc0c5ad252b43dcb 234 Gene3D G3DSA:3.40.50.300 1 234 6.5E-65 T 14-10-2018 VV1_0701 2df6f2a9c0dc72d5cc0c5ad252b43dcb 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1918 af6d2ace2e832e9ab4aadee9f6f535bf 95 PIRSF PIRSF037266 1 94 3.5E-42 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VV1_1918 af6d2ace2e832e9ab4aadee9f6f535bf 95 Pfam PF09904 Winged helix-turn helix 4 91 1.2E-38 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VV1_1918 af6d2ace2e832e9ab4aadee9f6f535bf 95 Gene3D G3DSA:1.10.10.10 2 95 1.7E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF07196 Flagellin hook IN motif 195 249 2.2E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 Gene3D G3DSA:1.10.8.410 328 376 2.1E-20 T 14-10-2018 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.9E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 SUPERFAMILY SSF64518 1 376 1.44E-97 T 14-10-2018 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 Gene3D G3DSA:1.20.1330.10 44 327 1.1E-74 T 14-10-2018 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 Gene3D G3DSA:3.30.70.2120 174 275 1.1E-74 T 14-10-2018 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0214 8e9d3be736b69f769e7f161856cfa00d 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV2_0596 62fe37401601c4cbd096ae4fd1236964 287 Pfam PF01380 SIS domain 124 250 6.0E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV2_0596 62fe37401601c4cbd096ae4fd1236964 287 SUPERFAMILY SSF46689 5 79 2.78E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0596 62fe37401601c4cbd096ae4fd1236964 287 Gene3D G3DSA:1.10.10.10 3 82 4.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0596 62fe37401601c4cbd096ae4fd1236964 287 SUPERFAMILY SSF53697 95 264 2.04E-35 T 14-10-2018 VV2_0596 62fe37401601c4cbd096ae4fd1236964 287 Gene3D G3DSA:3.40.50.10490 94 273 3.4E-37 T 14-10-2018 VV2_0596 62fe37401601c4cbd096ae4fd1236964 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 1.1E-15 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VV2_1070 e81a5bbcf7f71d2a1cd2027e69cac353 470 Gene3D G3DSA:1.10.2020.10 46 137 1.8E-201 T 14-10-2018 VV2_1070 e81a5bbcf7f71d2a1cd2027e69cac353 470 Pfam PF02614 Glucuronate isomerase 1 466 3.0E-229 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 VV2_1070 e81a5bbcf7f71d2a1cd2027e69cac353 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 50.02 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 VV2_1070 e81a5bbcf7f71d2a1cd2027e69cac353 470 SUPERFAMILY SSF51556 2 466 1.8E-182 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV2_1070 e81a5bbcf7f71d2a1cd2027e69cac353 470 Gene3D G3DSA:3.20.20.140 7 466 1.8E-201 T 14-10-2018 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF50465 298 393 2.19E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.0E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.5E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:2.40.30.10 206 334 3.3E-52 T 14-10-2018 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.4E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF50447 205 301 5.11E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:2.40.30.10 338 393 5.9E-29 T 14-10-2018 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 SUPERFAMILY SSF52540 6 219 3.86E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 Gene3D G3DSA:3.40.50.300 1 203 2.3E-69 T 14-10-2018 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.588 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1203 9df59776cb72a4f0154b07ab0deea014 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.5E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VV1_1314 2f3c1a2c3c975da9290b7f0a232f91ab 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 1.0E-130 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VV1_1314 2f3c1a2c3c975da9290b7f0a232f91ab 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 338 2.3E-140 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VV1_1314 2f3c1a2c3c975da9290b7f0a232f91ab 339 SUPERFAMILY SSF55729 1 338 4.06E-130 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1314 2f3c1a2c3c975da9290b7f0a232f91ab 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.2E-132 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VV1_1314 2f3c1a2c3c975da9290b7f0a232f91ab 339 Gene3D G3DSA:3.40.630.30 1 274 2.7E-113 T 14-10-2018 VV1_1314 2f3c1a2c3c975da9290b7f0a232f91ab 339 Gene3D G3DSA:2.40.40.20 275 339 5.0E-7 T 14-10-2018 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 Gene3D G3DSA:3.40.1190.10 81 311 6.1E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 Gene3D G3DSA:3.40.1390.10 1 80 2.6E-24 T 14-10-2018 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 SUPERFAMILY SSF63418 1 96 5.49E-24 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 SUPERFAMILY SSF53623 100 311 1.96E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 395 1.4E-12 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 Pfam PF01225 Mur ligase family, catalytic domain 27 84 1.8E-7 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 Gene3D G3DSA:3.90.190.20 313 453 3.6E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 33.189 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 Pfam PF08245 Mur ligase middle domain 105 293 2.7E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 SUPERFAMILY SSF53244 314 448 9.77E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0582 32a35c63998c74ae01aa013e63a28e13 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 2.7E-144 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_3030 838838c1d1bb57d76686ea6ccf3b8753 173 Gene3D G3DSA:3.40.30.10 27 173 2.5E-30 T 14-10-2018 VV1_3030 838838c1d1bb57d76686ea6ccf3b8753 173 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 36 169 3.4E-41 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VV1_3030 838838c1d1bb57d76686ea6ccf3b8753 173 SUPERFAMILY SSF52833 43 169 7.83E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_3030 838838c1d1bb57d76686ea6ccf3b8753 173 Pfam PF08534 Redoxin 53 160 2.0E-10 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VV1_0680 c7a2999613e2ac02b8f75ef34d62e2b4 84 Pfam PF01722 BolA-like protein 20 74 4.4E-15 T 14-10-2018 IPR002634 BolA protein VV1_0680 c7a2999613e2ac02b8f75ef34d62e2b4 84 Gene3D G3DSA:3.30.300.90 1 84 6.8E-33 T 14-10-2018 VV1_0680 c7a2999613e2ac02b8f75ef34d62e2b4 84 PIRSF PIRSF003113 2 83 1.0E-22 T 14-10-2018 IPR002634 BolA protein VV1_0680 c7a2999613e2ac02b8f75ef34d62e2b4 84 SUPERFAMILY SSF82657 4 82 7.85E-29 T 14-10-2018 IPR036065 BolA-like superfamily VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 5.7E-37 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 8.1E-85 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 SUPERFAMILY SSF53218 7 168 5.63E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 SMART SM00852 14 158 2.9E-27 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 3.4E-34 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 Gene3D G3DSA:3.40.980.10 2 170 9.6E-52 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV1_3087 2b95b7701ef8f0433b5bf236c318b65d 170 PIRSF PIRSF006443 1 166 3.0E-66 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VV1_0225 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV1_0225 1a0657c02b7dc05812b710f6dbe9875a 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.9E-51 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VV1_0225 1a0657c02b7dc05812b710f6dbe9875a 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VV1_0225 1a0657c02b7dc05812b710f6dbe9875a 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 3.1E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV1_2834 5ef14d37feeb10c80cdbec1ccd349c06 374 Gene3D G3DSA:2.40.370.10 67 251 9.0E-53 T 14-10-2018 IPR023374 AttH-like domain superfamily VV1_2834 5ef14d37feeb10c80cdbec1ccd349c06 374 Gene3D G3DSA:2.40.370.10 252 374 2.8E-24 T 14-10-2018 IPR023374 AttH-like domain superfamily VV1_2834 5ef14d37feeb10c80cdbec1ccd349c06 374 SUPERFAMILY SSF159245 56 374 2.88E-94 T 14-10-2018 VV1_2834 5ef14d37feeb10c80cdbec1ccd349c06 374 Pfam PF17186 Lipocalin-like domain 252 374 1.1E-32 T 14-10-2018 VV1_2834 5ef14d37feeb10c80cdbec1ccd349c06 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 7.0E-45 T 14-10-2018 IPR010791 AttH domain VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SUPERFAMILY SSF50341 555 687 4.05E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Gene3D G3DSA:1.10.287.560 305 367 5.0E-17 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Gene3D G3DSA:2.30.30.40 556 683 1.4E-37 T 14-10-2018 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Pfam PF01627 Hpt domain 7 96 1.1E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SUPERFAMILY SSF47226 4 128 1.01E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 555 1.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SMART SM00387 412 556 1.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Pfam PF01584 CheW-like domain 563 688 3.0E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SUPERFAMILY SSF47384 306 368 2.24E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Gene3D G3DSA:3.30.565.10 368 555 3.8E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 306 367 7.3E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Gene3D G3DSA:1.20.120.160 1 144 5.4E-36 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SUPERFAMILY SSF55874 371 554 3.14E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SMART SM01231 304 367 4.1E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 Gene3D G3DSA:2.40.50.180 579 642 1.4E-37 T 14-10-2018 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SMART SM00073 5 102 8.0E-21 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 510 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1168 6d669a15c9f22f31849e1fa062ec6e70 704 SMART SM00260 548 687 1.1E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_0497 f3fe7c8d4f43bacbf2cd88f66e14a593 534 Gene3D G3DSA:3.90.226.10 274 534 4.1E-97 T 14-10-2018 VV2_0497 f3fe7c8d4f43bacbf2cd88f66e14a593 534 Gene3D G3DSA:3.90.226.10 1 268 7.4E-92 T 14-10-2018 VV2_0497 f3fe7c8d4f43bacbf2cd88f66e14a593 534 SUPERFAMILY SSF52096 25 267 4.83E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV2_0497 f3fe7c8d4f43bacbf2cd88f66e14a593 534 SUPERFAMILY SSF52096 237 517 1.24E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV2_0497 f3fe7c8d4f43bacbf2cd88f66e14a593 534 Pfam PF01039 Carboxyl transferase domain 48 523 6.0E-142 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 SUPERFAMILY SSF53822 61 315 1.97E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 Pfam PF13377 Periplasmic binding protein-like domain 168 313 1.0E-29 T 14-10-2018 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 Gene3D G3DSA:3.40.50.2300 160 289 2.7E-66 T 14-10-2018 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 Gene3D G3DSA:1.10.260.40 1 54 2.6E-21 T 14-10-2018 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 Gene3D G3DSA:3.40.50.2300 55 306 2.7E-66 T 14-10-2018 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 SMART SM00354 1 71 2.5E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1487 0be1f23cdae2c7ca064cc2542274e207 331 SUPERFAMILY SSF47413 2 59 2.28E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_1583 ba8b6b20c713bbde3ec40d5d51874e05 158 SUPERFAMILY SSF69765 1 157 3.79E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VV1_1583 ba8b6b20c713bbde3ec40d5d51874e05 158 Pfam PF02542 YgbB family 2 155 1.0E-65 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VV1_1583 ba8b6b20c713bbde3ec40d5d51874e05 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VV1_1583 ba8b6b20c713bbde3ec40d5d51874e05 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.6E-69 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VV1_1583 ba8b6b20c713bbde3ec40d5d51874e05 158 Gene3D G3DSA:3.30.1330.50 1 158 1.0E-69 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VV1_1583 ba8b6b20c713bbde3ec40d5d51874e05 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.311 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VV2_0685 057dc928bf911f8af8a4eb09054d6bbd 338 Pfam PF13531 Bacterial extracellular solute-binding protein 35 285 1.4E-41 T 14-10-2018 VV2_0685 057dc928bf911f8af8a4eb09054d6bbd 338 SUPERFAMILY SSF53850 25 334 1.24E-82 T 14-10-2018 VV2_0685 057dc928bf911f8af8a4eb09054d6bbd 338 Gene3D G3DSA:3.40.190.10 30 301 3.4E-128 T 14-10-2018 VV2_0685 057dc928bf911f8af8a4eb09054d6bbd 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 19 332 2.0E-134 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 VV2_0685 057dc928bf911f8af8a4eb09054d6bbd 338 Gene3D G3DSA:3.40.190.10 118 331 3.4E-128 T 14-10-2018 VV2_0685 057dc928bf911f8af8a4eb09054d6bbd 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 149 157 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 SMART SM00173 209 380 0.0091 T 14-10-2018 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 462 1.3E-26 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 SMART SM00382 1 173 1.4 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 SMART SM00382 206 353 0.12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 SUPERFAMILY SSF52540 4 163 1.31E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 PIRSF PIRSF006485 1 471 1.4E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 Gene3D G3DSA:3.40.50.300 2 160 1.3E-42 T 14-10-2018 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 1.4E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 206 372 1.5E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 9.5E-180 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 SUPERFAMILY SSF52540 194 469 3.96E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 Pfam PF01926 50S ribosome-binding GTPase 210 327 1.3E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.1E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 6.8E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.8E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 Hamap MF_00195 GTPase Der [der]. 2 466 39.122 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 Gene3D G3DSA:3.30.300.20 383 465 3.6E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV1_0423 a21fc38861d5a0b48da4586ff62f4430 496 Gene3D G3DSA:3.40.50.300 201 380 3.2E-50 T 14-10-2018 VV1_2506 863b93d960db90d458284e9071ac461b 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 1.1E-26 T 14-10-2018 IPR000182 GNAT domain VV1_2506 863b93d960db90d458284e9071ac461b 171 Gene3D G3DSA:3.40.630.30 2 164 2.4E-36 T 14-10-2018 VV1_2506 863b93d960db90d458284e9071ac461b 171 SUPERFAMILY SSF55729 2 150 1.89E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2482 863b93d960db90d458284e9071ac461b 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 147 1.1E-26 T 14-10-2018 IPR000182 GNAT domain VV1_2482 863b93d960db90d458284e9071ac461b 171 Gene3D G3DSA:3.40.630.30 2 164 2.4E-36 T 14-10-2018 VV1_2482 863b93d960db90d458284e9071ac461b 171 SUPERFAMILY SSF55729 2 150 1.89E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0804 bba57f1d5eab320acb53817c63b16b47 623 Gene3D G3DSA:1.20.1250.20 6 416 3.4E-24 T 14-10-2018 VV2_0804 bba57f1d5eab320acb53817c63b16b47 623 SUPERFAMILY SSF69593 372 617 1.44E-33 T 14-10-2018 VV2_0804 bba57f1d5eab320acb53817c63b16b47 623 SUPERFAMILY SSF103473 40 423 1.05E-23 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0804 bba57f1d5eab320acb53817c63b16b47 623 SMART SM00563 451 567 3.6E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV2_0804 bba57f1d5eab320acb53817c63b16b47 623 Pfam PF07690 Major Facilitator Superfamily 47 380 1.3E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0804 bba57f1d5eab320acb53817c63b16b47 623 Pfam PF01553 Acyltransferase 436 564 4.1E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_2949 5c55e61b130a5ea73ad8fae09fded28d 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 197 2.8E-64 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VV1_2949 5c55e61b130a5ea73ad8fae09fded28d 198 SUPERFAMILY SSF89392 20 197 2.63E-51 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV1_2949 5c55e61b130a5ea73ad8fae09fded28d 198 Gene3D G3DSA:2.50.20.10 16 197 3.3E-47 T 14-10-2018 VV1_2949 5c55e61b130a5ea73ad8fae09fded28d 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 185 1.9E-55 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VV1_2949 5c55e61b130a5ea73ad8fae09fded28d 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 31.24 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 1.5E-162 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 Gene3D G3DSA:1.10.230.10 229 327 2.9E-118 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 PIRSF PIRSF001369 10 380 2.8E-116 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 PRINTS PR00143 Citrate synthase signature 130 143 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 PRINTS PR00143 Citrate synthase signature 256 276 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 PRINTS PR00143 Citrate synthase signature 333 347 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 PRINTS PR00143 Citrate synthase signature 181 196 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 PRINTS PR00143 Citrate synthase signature 313 329 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 PRINTS PR00143 Citrate synthase signature 203 231 9.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 2.3E-113 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 Gene3D G3DSA:1.10.580.10 36 360 2.9E-118 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VV1_2731 e5153d09e3faef26c900ffe3ba66eedb 380 SUPERFAMILY SSF48256 14 380 7.98E-125 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VV1_1262 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.7E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV1_1262 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.7E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV1_1262 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.7E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV1_1262 40566c3f81bcfc8af1dc9e5ea87363c6 164 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.7E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV1_1262 40566c3f81bcfc8af1dc9e5ea87363c6 164 Pfam PF02308 MgtC family 19 141 6.4E-29 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 Gene3D G3DSA:3.40.50.2300 3 132 3.0E-25 T 14-10-2018 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 Pfam PF00072 Response regulator receiver domain 7 119 6.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 SMART SM00421 147 204 7.3E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 Gene3D G3DSA:1.10.10.10 148 211 4.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 SMART SM00448 5 119 5.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 SUPERFAMILY SSF52172 4 173 1.61E-25 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1246 3bc95651bd4143aca041191ad6be9b3d 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_3100 e7b19a6c44c97a3140f27fc74a1ef45b 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.1E-22 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_3100 e7b19a6c44c97a3140f27fc74a1ef45b 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 5.2E-68 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VV1_3100 e7b19a6c44c97a3140f27fc74a1ef45b 138 Gene3D G3DSA:3.10.180.10 3 135 6.4E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_3100 e7b19a6c44c97a3140f27fc74a1ef45b 138 SUPERFAMILY SSF54593 3 130 6.04E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_3100 e7b19a6c44c97a3140f27fc74a1ef45b 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VV1_0469 517eb1d02ec0d13d064c0ca769f29606 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.488 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VV1_0469 517eb1d02ec0d13d064c0ca769f29606 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 8.1E-126 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 536 5.9E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 Gene3D G3DSA:3.30.565.10 382 539 5.2E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 SUPERFAMILY SSF55874 388 534 1.57E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 369 7.2E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 SUPERFAMILY SSF55785 215 306 2.42E-12 T 14-10-2018 IPR035965 PAS domain superfamily VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 SMART SM00091 213 279 1.2E-4 T 14-10-2018 IPR000014 PAS domain VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 SUPERFAMILY SSF55890 322 405 6.15E-10 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 Pfam PF17203 Single cache domain 3 37 167 2.4E-19 T 14-10-2018 IPR033463 Single cache domain 3 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 SUPERFAMILY SSF103190 40 168 2.12E-34 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 SMART SM00387 418 537 1.0E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 Gene3D G3DSA:3.30.450.20 199 310 5.7E-22 T 14-10-2018 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 Pfam PF00989 PAS fold 215 276 2.8E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 1.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2686 5c5b257f522a256a8b8458d46a6596be 539 Gene3D G3DSA:3.30.450.20 34 164 1.8E-39 T 14-10-2018 VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 Gene3D G3DSA:2.170.130.10 28 152 1.7E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 606 32.709 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 Gene3D G3DSA:2.40.170.20 155 606 1.4E-93 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 147 1.1E-31 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 SUPERFAMILY SSF56935 29 606 5.5E-111 T 14-10-2018 VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 589 606 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 14-10-2018 IPR010916 TonB box, conserved site VV1_1173 f2d72a5f14673a79fa535ce3d47abaa2 606 Pfam PF00593 TonB dependent receptor 203 605 6.4E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV1_1732 04373470765bb4f059f6191466261b24 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.0E-226 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VV1_1732 04373470765bb4f059f6191466261b24 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.5E-94 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.5E-94 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.5E-94 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.5E-94 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.5E-94 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.5E-94 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.5E-94 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 SMART SM00382 93 247 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1732 04373470765bb4f059f6191466261b24 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 7.8E-9 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 Pfam PF13481 AAA domain 82 224 5.9E-13 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 SUPERFAMILY SSF54211 257 455 1.74E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1732 04373470765bb4f059f6191466261b24 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.016 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VV1_1732 04373470765bb4f059f6191466261b24 459 SUPERFAMILY SSF52540 70 293 3.46E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1732 04373470765bb4f059f6191466261b24 459 Gene3D G3DSA:3.40.50.300 68 281 4.7E-40 T 14-10-2018 VV1_1732 04373470765bb4f059f6191466261b24 459 Gene3D G3DSA:3.30.230.10 328 458 5.2E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV2_1096 a03157c5082598529533df6e67fe530e 541 Gene3D G3DSA:3.30.750.24 430 532 1.8E-9 T 14-10-2018 IPR036513 STAS domain superfamily VV2_1096 a03157c5082598529533df6e67fe530e 541 SUPERFAMILY SSF52091 436 509 1.94E-9 T 14-10-2018 IPR036513 STAS domain superfamily VV2_1096 a03157c5082598529533df6e67fe530e 541 Pfam PF00916 Sulfate permease family 27 395 2.2E-90 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VV2_0734 076f40b81f95bfd0a28af61ec1c0c758 225 Gene3D G3DSA:3.20.20.70 1 217 6.6E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0734 076f40b81f95bfd0a28af61ec1c0c758 225 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 24 214 1.6E-83 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VV2_0734 076f40b81f95bfd0a28af61ec1c0c758 225 SUPERFAMILY SSF51366 2 211 4.71E-50 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV2_0734 076f40b81f95bfd0a28af61ec1c0c758 225 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 2 214 33.901 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 2 258 1.45E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 Gene3D G3DSA:3.40.50.300 8 274 1.5E-58 T 14-10-2018 VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF00005 ABC transporter 17 178 2.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF12848 ABC transporter 217 295 1.4E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 SMART SM00382 337 503 5.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 SMART SM00382 26 223 7.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 Pfam PF00005 ABC transporter 328 459 4.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 SUPERFAMILY SSF52540 279 494 2.27E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1323 02f9a34cd9a3b84dc761404d41bcbbbe 640 Gene3D G3DSA:3.40.50.300 276 539 1.3E-54 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.1E-6 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.1E-6 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.1E-6 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 SUPERFAMILY SSF54810 397 517 4.71E-51 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 Gene3D G3DSA:3.40.50.620 202 397 1.9E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 2.4E-156 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.69 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 SUPERFAMILY SSF52402 189 412 3.75E-58 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 Gene3D G3DSA:3.40.50.880 6 201 2.1E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.3E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.4E-42 T 14-10-2018 IPR017926 Glutamine amidotransferase VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 4.7E-85 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 Gene3D G3DSA:3.30.300.10 398 517 6.7E-51 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.4E-7 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 14-10-2018 VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 SUPERFAMILY SSF52317 8 229 5.5E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_0418 c7fd6d3565a98f4446d35ac93cf09c31 517 Pfam PF02540 NAD synthase 212 285 1.1E-7 T 14-10-2018 IPR022310 NAD/GMP synthase VV1_0303 3e2983a56e0ac54f355b29798fab0be3 363 PIRSF PIRSF028774 1 362 4.1E-193 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VV1_0303 3e2983a56e0ac54f355b29798fab0be3 363 Pfam PF01728 FtsJ-like methyltransferase 188 251 6.7E-6 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VV1_0303 3e2983a56e0ac54f355b29798fab0be3 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.432 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VV1_0303 3e2983a56e0ac54f355b29798fab0be3 363 Gene3D G3DSA:3.30.70.2810 1 78 2.3E-31 T 14-10-2018 VV1_0303 3e2983a56e0ac54f355b29798fab0be3 363 SUPERFAMILY SSF53335 186 281 2.22E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0303 3e2983a56e0ac54f355b29798fab0be3 363 Gene3D G3DSA:3.30.2300.20 80 177 7.1E-37 T 14-10-2018 VV1_0303 3e2983a56e0ac54f355b29798fab0be3 363 Gene3D G3DSA:3.40.50.150 178 358 1.2E-52 T 14-10-2018 VV1_0825 1daff0aa6e218ca32b230adda0467de2 224 Pfam PF04002 RadC-like JAB domain 104 222 1.9E-45 T 14-10-2018 IPR025657 RadC-like JAB domain VV1_0825 1daff0aa6e218ca32b230adda0467de2 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VV1_0825 1daff0aa6e218ca32b230adda0467de2 224 SUPERFAMILY SSF47781 17 91 2.71E-10 T 14-10-2018 IPR010994 RuvA domain 2-like VV1_0825 1daff0aa6e218ca32b230adda0467de2 224 SUPERFAMILY SSF102712 130 192 5.89E-5 T 14-10-2018 VV1_0825 1daff0aa6e218ca32b230adda0467de2 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.0E-77 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 VV1_0825 1daff0aa6e218ca32b230adda0467de2 224 Gene3D G3DSA:3.40.140.10 102 224 3.8E-44 T 14-10-2018 VV1_0278 99f7f6c02906395741bca88909f0c633 630 Gene3D G3DSA:3.90.1310.10 66 250 9.7E-53 T 14-10-2018 VV1_0278 99f7f6c02906395741bca88909f0c633 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 1.8E-239 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_0278 99f7f6c02906395741bca88909f0c633 630 Gene3D G3DSA:3.30.1390.30 87 162 9.7E-53 T 14-10-2018 VV1_0278 99f7f6c02906395741bca88909f0c633 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 1.9E-50 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VV1_0278 99f7f6c02906395741bca88909f0c633 630 Gene3D G3DSA:3.40.710.10 251 629 2.5E-93 T 14-10-2018 VV1_0278 99f7f6c02906395741bca88909f0c633 630 SUPERFAMILY SSF56601 256 620 9.09E-95 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_0278 99f7f6c02906395741bca88909f0c633 630 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.422 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_0278 99f7f6c02906395741bca88909f0c633 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 4.6E-76 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV1_0278 99f7f6c02906395741bca88909f0c633 630 SUPERFAMILY SSF56519 58 254 9.03E-56 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 Gene3D G3DSA:1.10.287.950 251 581 1.2E-64 T 14-10-2018 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 391 547 2.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 SUPERFAMILY SSF58104 272 580 3.79E-67 T 14-10-2018 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 SMART SM00283 319 580 1.4E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 SMART SM00304 251 304 0.0037 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 SMART SM00304 307 357 76.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 3.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 444 3.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0979 347aa96040c25b19f57bca80b4e42b19 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 3.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_2181 b93f76bd06690f1a91a8fde2bcfaab72 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 2.0E-69 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VV1_2181 b93f76bd06690f1a91a8fde2bcfaab72 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.432 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VV1_2181 b93f76bd06690f1a91a8fde2bcfaab72 149 Pfam PF06610 L-alanine exporter 8 142 4.1E-68 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VV2_0961 2b1c1b19669b2cf5c9d21dbbf58adf74 287 SUPERFAMILY SSF103481 39 145 4.97E-6 T 14-10-2018 VV2_0961 2b1c1b19669b2cf5c9d21dbbf58adf74 287 Pfam PF00892 EamA-like transporter family 154 282 5.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0961 2b1c1b19669b2cf5c9d21dbbf58adf74 287 Pfam PF00892 EamA-like transporter family 6 141 3.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0961 2b1c1b19669b2cf5c9d21dbbf58adf74 287 SUPERFAMILY SSF103481 186 284 1.14E-10 T 14-10-2018 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF51735 3 166 1.63E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.40.50.720 4 326 2.0E-154 T 14-10-2018 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.2E-136 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SMART SM00846 3 150 8.6E-95 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.1E-46 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 5.5E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 PIRSF PIRSF000149 1 331 3.8E-134 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 SUPERFAMILY SSF55347 149 312 1.81E-77 T 14-10-2018 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 9.2E-70 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3140 6aaf3f8f14703bbf9eab7b306dc1ed3a 331 Gene3D G3DSA:3.30.360.10 149 314 2.0E-154 T 14-10-2018 VV1_2931 4d735527160579b38e5d6ffa2f26141b 171 Pfam PF11086 Protein of unknown function (DUF2878) 4 149 1.4E-32 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 VV2_0739 ed27f6118218201e9df45fb5b8cbc522 590 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 9.3E-249 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 VV2_0739 ed27f6118218201e9df45fb5b8cbc522 590 SUPERFAMILY SSF53474 225 526 7.35E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0739 ed27f6118218201e9df45fb5b8cbc522 590 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 5.5E-74 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 VV2_0739 ed27f6118218201e9df45fb5b8cbc522 590 Gene3D G3DSA:3.40.50.1820 229 517 2.3E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2103 5a67414d1551419978bfdc9324d2aafd 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 3.5E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2103 5a67414d1551419978bfdc9324d2aafd 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 74 1.7E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV1_2103 5a67414d1551419978bfdc9324d2aafd 246 Gene3D G3DSA:1.10.3720.10 3 243 2.9E-48 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2103 5a67414d1551419978bfdc9324d2aafd 246 SUPERFAMILY SSF161098 11 227 7.98E-39 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2976 a4f1c2b77244d0681eb96d92308894a5 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 337 6.7E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2976 a4f1c2b77244d0681eb96d92308894a5 340 Gene3D G3DSA:1.10.3720.10 102 330 1.5E-17 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2976 a4f1c2b77244d0681eb96d92308894a5 340 SUPERFAMILY SSF161098 108 320 5.89E-14 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 214 2.3E-20 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 Gene3D G3DSA:2.40.30.10 1 102 3.1E-22 T 14-10-2018 VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 SUPERFAMILY SSF63380 2 101 8.37E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 Gene3D G3DSA:3.40.50.80 103 237 1.6E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 SUPERFAMILY SSF52343 104 235 7.46E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 2.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 2.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 2.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 2.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_0933 b77663f33f9a2a14c65141a4e1d8bb11 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 2.8E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_2516 2b2f1b63d54bb26329fb15106924ad9f 177 SUPERFAMILY SSF110849 106 167 8.55E-5 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VV1_0714 499200c27f4205ee506394dc1192c0d0 69 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-32 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VV1_0714 499200c27f4205ee506394dc1192c0d0 69 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 8.8E-27 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VV1_0714 499200c27f4205ee506394dc1192c0d0 69 Gene3D G3DSA:3.30.1910.10 2 65 1.2E-19 T 14-10-2018 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SUPERFAMILY SSF47384 445 527 3.73E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SMART SM00387 573 684 1.9E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Gene3D G3DSA:3.30.450.20 258 358 2.4E-6 T 14-10-2018 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Gene3D G3DSA:3.30.450.20 864 956 2.9E-8 T 14-10-2018 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Gene3D G3DSA:3.40.50.2300 723 863 6.7E-41 T 14-10-2018 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Pfam PF00989 PAS fold 877 926 6.1E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Gene3D G3DSA:1.10.8.500 376 427 2.0E-16 T 14-10-2018 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Pfam PF00072 Response regulator receiver domain 726 837 3.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SMART SM00304 377 430 2.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SUPERFAMILY SSF55874 516 688 4.98E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SUPERFAMILY SSF158472 378 428 6.8E-11 T 14-10-2018 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SMART SM00448 723 836 8.6E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Gene3D G3DSA:3.30.565.10 526 688 1.8E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 1.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Pfam PF00672 HAMP domain 379 427 8.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 4.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SMART SM00091 874 939 2.4E-5 T 14-10-2018 IPR000014 PAS domain VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SMART SM00388 459 527 1.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 Gene3D G3DSA:1.10.287.130 428 525 1.3E-22 T 14-10-2018 VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SUPERFAMILY SSF52172 719 841 4.7E-41 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1674 7da39f19582f4172c5b8ba386aabce85 1129 SUPERFAMILY SSF55785 861 930 8.03E-9 T 14-10-2018 IPR035965 PAS domain superfamily VV1_0403 3d2defadab40da990b67e33b96d7096f 580 SUPERFAMILY SSF55729 312 458 9.0E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_0403 3d2defadab40da990b67e33b96d7096f 580 Pfam PF01553 Acyltransferase 66 194 3.7E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_0403 3d2defadab40da990b67e33b96d7096f 580 SMART SM00563 74 197 1.3E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_0403 3d2defadab40da990b67e33b96d7096f 580 SUPERFAMILY SSF69593 42 252 2.09E-12 T 14-10-2018 VV1_0403 3d2defadab40da990b67e33b96d7096f 580 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 1.2E-19 T 14-10-2018 VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 Gene3D G3DSA:3.30.70.270 400 573 2.3E-13 T 14-10-2018 VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 Gene3D G3DSA:3.20.20.450 592 828 1.1E-59 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 416 476 9.4E-7 T 14-10-2018 IPR000160 GGDEF domain VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 Pfam PF00563 EAL domain 599 825 1.9E-57 T 14-10-2018 IPR001633 EAL domain VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 SMART SM00052 591 829 2.7E-32 T 14-10-2018 IPR001633 EAL domain VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 SUPERFAMILY SSF55073 420 562 6.75E-8 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 Pfam PF10442 FIST C domain 216 341 5.3E-12 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 SUPERFAMILY SSF141868 599 825 9.02E-59 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 SMART SM00897 27 215 4.5E-30 T 14-10-2018 IPR013702 FIST domain, N-terminal VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 SMART SM00267 403 578 4.2E-4 T 14-10-2018 IPR000160 GGDEF domain VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 SMART SM01204 216 342 2.9E-17 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VV1_1132 12a954e3915a0882113ab7211a8e49f3 829 Pfam PF08495 FIST N domain 30 214 7.2E-20 T 14-10-2018 IPR013702 FIST domain, N-terminal VV1_2836 f29dbaabed0d49888e113d8b14c5375c 817 Pfam PF02687 FtsX-like permease family 715 809 3.9E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV1_2836 f29dbaabed0d49888e113d8b14c5375c 817 Pfam PF02687 FtsX-like permease family 271 368 2.9E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 733 1.6E-274 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 Gene3D G3DSA:2.40.50.140 653 764 1.7E-26 T 14-10-2018 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 SMART SM00316 650 733 6.0E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 Gene3D G3DSA:2.40.50.140 77 155 4.9E-11 T 14-10-2018 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 SMART SM00357 90 152 1.9E-15 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 Pfam PF08206 Ribonuclease B OB domain 91 151 1.4E-21 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.08 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.8E-12 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 8.1E-256 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 Pfam PF00575 S1 RNA binding domain 650 731 9.2E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 SUPERFAMILY SSF50249 145 244 3.47E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 SUPERFAMILY SSF50249 227 650 1.71E-143 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 SUPERFAMILY SSF50249 651 739 7.86E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 Pfam PF00773 RNB domain 267 594 4.1E-107 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 SMART SM00955 267 595 7.6E-185 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VV1_1304 8bbf848195f726fbeb655e8c448eccf3 817 SUPERFAMILY SSF50249 71 153 2.4E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0873 9f36b21ff3052293b89216391adc289a 200 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 8 186 1.0E-16 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV1_0873 9f36b21ff3052293b89216391adc289a 200 SUPERFAMILY SSF54523 12 90 9.42E-8 T 14-10-2018 VV1_0873 9f36b21ff3052293b89216391adc289a 200 Gene3D G3DSA:3.55.40.10 39 199 2.6E-47 T 14-10-2018 VV1_0873 9f36b21ff3052293b89216391adc289a 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0873 9f36b21ff3052293b89216391adc289a 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 4.4E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0873 9f36b21ff3052293b89216391adc289a 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 163 1.6E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV1_0873 9f36b21ff3052293b89216391adc289a 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 7 21 1.6E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV1_0873 9f36b21ff3052293b89216391adc289a 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 22 36 1.6E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV1_0873 9f36b21ff3052293b89216391adc289a 200 Pfam PF12019 Type II transport protein GspH 47 185 6.0E-11 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VV1_1157 d60cfd2cefcc6b48e458111ec0926681 322 PIRSF PIRSF003097 24 318 9.4E-60 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 SUPERFAMILY SSF47188 3 131 2.35E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 ProSitePatterns PS00550 Hemerythrin family signature. 59 84 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 Gene3D G3DSA:1.20.120.50 2 136 2.5E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 5.1E-8 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 SUPERFAMILY SSF55073 211 365 3.92E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 8.6E-46 T 14-10-2018 IPR000160 GGDEF domain VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 SMART SM00267 195 367 1.8E-49 T 14-10-2018 IPR000160 GGDEF domain VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 Gene3D G3DSA:3.30.70.270 191 367 6.9E-51 T 14-10-2018 VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 362 5.5E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_2369 75f8a98578aa783dfec46bd1493a0e33 371 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 3.2E-31 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VV1_3018 585a8601e37bd560485ca1228c74a847 1036 Hamap MF_00970 Ribonuclease E [rne]. 1 1023 35.481 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VV1_3018 585a8601e37bd560485ca1228c74a847 1036 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 6.7E-171 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VV1_3018 585a8601e37bd560485ca1228c74a847 1036 Gene3D G3DSA:2.40.50.140 32 125 5.5E-32 T 14-10-2018 VV1_3018 585a8601e37bd560485ca1228c74a847 1036 SMART SM00316 37 119 2.1E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_3018 585a8601e37bd560485ca1228c74a847 1036 Gene3D G3DSA:3.40.1260.20 400 508 1.1E-38 T 14-10-2018 VV1_3018 585a8601e37bd560485ca1228c74a847 1036 SUPERFAMILY SSF50249 40 124 1.26E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_3018 585a8601e37bd560485ca1228c74a847 1036 Pfam PF10150 Ribonuclease E/G family 121 390 5.2E-95 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VV1_3018 585a8601e37bd560485ca1228c74a847 1036 Pfam PF00575 S1 RNA binding domain 37 118 1.3E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_1144 035273b1e0e2d1a5c3d1801e8724e303 337 Pfam PF01757 Acyltransferase family 7 327 1.4E-37 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VV1_1862 ff8a566e6659411fb2cc89ab370d5171 104 SUPERFAMILY SSF55194 2 104 4.58E-37 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VV1_1862 ff8a566e6659411fb2cc89ab370d5171 104 Pfam PF01765 Ribosome recycling factor 20 103 1.4E-29 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VV1_1862 ff8a566e6659411fb2cc89ab370d5171 104 Gene3D G3DSA:3.30.1360.40 36 104 5.4E-30 T 14-10-2018 VV1_1862 ff8a566e6659411fb2cc89ab370d5171 104 Gene3D G3DSA:1.10.132.20 1 35 6.2E-9 T 14-10-2018 VV1_0189 621394ab496a441b5cf8cd4661d96062 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.278 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VV1_0189 621394ab496a441b5cf8cd4661d96062 634 Gene3D G3DSA:3.40.50.11260 405 494 3.0E-35 T 14-10-2018 VV1_0189 621394ab496a441b5cf8cd4661d96062 634 Gene3D G3DSA:3.30.565.10 6 220 2.3E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0189 621394ab496a441b5cf8cd4661d96062 634 SUPERFAMILY SSF55874 10 217 5.76E-64 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0189 621394ab496a441b5cf8cd4661d96062 634 Pfam PF00183 Hsp90 protein 226 633 2.7E-128 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VV1_0189 621394ab496a441b5cf8cd4661d96062 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.3E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VV1_0189 621394ab496a441b5cf8cd4661d96062 634 Gene3D G3DSA:1.20.120.790 500 632 1.0E-41 T 14-10-2018 IPR037196 HSP90, C-terminal domain VV1_0189 621394ab496a441b5cf8cd4661d96062 634 SUPERFAMILY SSF110942 520 632 1.09E-33 T 14-10-2018 IPR037196 HSP90, C-terminal domain VV1_0189 621394ab496a441b5cf8cd4661d96062 634 SMART SM00387 32 189 3.6E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0189 621394ab496a441b5cf8cd4661d96062 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 8.2E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0189 621394ab496a441b5cf8cd4661d96062 634 Gene3D G3DSA:3.30.230.80 237 404 8.2E-70 T 14-10-2018 VV1_0189 621394ab496a441b5cf8cd4661d96062 634 PIRSF PIRSF002583 1 634 1.2E-214 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VV1_0189 621394ab496a441b5cf8cd4661d96062 634 SUPERFAMILY SSF54211 238 493 5.08E-100 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0753 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0753 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0753 be170dc137fffee7266abf9038e75abd 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0753 be170dc137fffee7266abf9038e75abd 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-38 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0753 be170dc137fffee7266abf9038e75abd 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.224 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0753 be170dc137fffee7266abf9038e75abd 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0753 be170dc137fffee7266abf9038e75abd 84 SUPERFAMILY SSF50249 6 83 5.14E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0753 be170dc137fffee7266abf9038e75abd 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 5.0E-39 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0753 be170dc137fffee7266abf9038e75abd 84 Pfam PF00366 Ribosomal protein S17 10 77 1.0E-34 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0753 be170dc137fffee7266abf9038e75abd 84 Gene3D G3DSA:2.40.50.140 1 84 4.0E-39 T 14-10-2018 VV1_0313 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Pfam PF02609 Exonuclease VII small subunit 11 61 7.5E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV1_0313 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Gene3D G3DSA:1.10.287.1040 4 77 1.3E-22 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VV1_0313 de2b79ed26cf3eb87de5bd2f0b015b1b 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 47 3.0E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV1_0313 de2b79ed26cf3eb87de5bd2f0b015b1b 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 9.0E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV1_0313 de2b79ed26cf3eb87de5bd2f0b015b1b 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.346 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV1_0313 de2b79ed26cf3eb87de5bd2f0b015b1b 80 PIRSF PIRSF006488 1 77 1.3E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VV1_0313 de2b79ed26cf3eb87de5bd2f0b015b1b 80 SUPERFAMILY SSF116842 2 72 4.71E-21 T 14-10-2018 VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 Pfam PF03466 LysR substrate binding domain 88 287 4.4E-44 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 SUPERFAMILY SSF53850 90 288 5.43E-40 T 14-10-2018 VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 SUPERFAMILY SSF46785 1 86 1.47E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 Gene3D G3DSA:1.10.10.10 1 91 1.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2777 4f98f8ab625c53b9f22b6018a9d04bb7 289 Gene3D G3DSA:3.40.190.290 92 289 9.0E-47 T 14-10-2018 VV1_0048 77d754cbac0f41ef2f89faf4fd803748 84 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.069 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VV1_0048 77d754cbac0f41ef2f89faf4fd803748 84 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.9E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VV1_0048 77d754cbac0f41ef2f89faf4fd803748 84 SUPERFAMILY SSF47336 4 82 1.7E-19 T 14-10-2018 IPR036736 ACP-like superfamily VV1_0048 77d754cbac0f41ef2f89faf4fd803748 84 Gene3D G3DSA:1.10.1200.10 1 80 6.6E-19 T 14-10-2018 IPR036736 ACP-like superfamily VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 SUPERFAMILY SSF52540 5 238 6.62E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 SMART SM00382 25 168 3.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 Gene3D G3DSA:3.40.50.300 2 176 1.4E-63 T 14-10-2018 VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 Pfam PF00158 Sigma-54 interaction domain 5 171 9.0E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 SUPERFAMILY SSF46689 246 322 8.06E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 Gene3D G3DSA:1.10.8.60 177 260 5.6E-18 T 14-10-2018 VV2_0683 70899ea0615b1fe21c22eb072dbd9cd5 329 Gene3D G3DSA:1.10.10.60 276 322 3.0E-8 T 14-10-2018 VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.6E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 Gene3D G3DSA:1.10.10.10 3 54 3.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 Gene3D G3DSA:3.30.70.920 55 139 2.2E-22 T 14-10-2018 VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 SUPERFAMILY SSF54909 62 151 2.15E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 SUPERFAMILY SSF46785 2 91 1.47E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.3E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.3E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.3E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.4E-17 T 14-10-2018 VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 SMART SM00344 2 111 3.2E-46 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV1_3152 16e49999d1d585dfddd35a400db0d6e6 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VV2_1332 9c491ce07fec72d41bdcd1d07eb674fd 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 VV2_1332 9c491ce07fec72d41bdcd1d07eb674fd 457 Gene3D G3DSA:1.20.1250.20 12 430 1.9E-18 T 14-10-2018 VV2_1332 9c491ce07fec72d41bdcd1d07eb674fd 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 10 439 1.2E-136 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VV2_1332 9c491ce07fec72d41bdcd1d07eb674fd 457 Pfam PF13347 MFS/sugar transport protein 12 433 1.4E-93 T 14-10-2018 VV2_1332 9c491ce07fec72d41bdcd1d07eb674fd 457 SUPERFAMILY SSF103473 20 434 2.75E-30 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:3.40.190.10 360 450 1.7E-20 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:3.40.190.10 127 217 1.6E-22 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:3.40.190.10 57 240 1.6E-22 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:1.10.287.130 643 736 1.5E-20 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SUPERFAMILY SSF52172 995 1121 6.4E-30 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SUPERFAMILY SSF47226 1119 1216 2.36E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SUPERFAMILY SSF53850 60 240 2.17E-23 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Pfam PF00072 Response regulator receiver domain 996 1106 6.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Pfam PF01627 Hpt domain 1133 1206 6.5E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 240 1.4E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:3.40.50.2300 992 1116 2.8E-29 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:3.30.565.10 737 899 2.3E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SMART SM00387 785 896 2.6E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SMART SM00388 673 738 3.6E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SUPERFAMILY SSF47384 659 739 1.0E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SMART SM00062 40 251 0.002 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SUPERFAMILY SSF55874 727 896 5.37E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:1.20.120.160 1117 1217 1.2E-10 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Pfam PF00512 His Kinase A (phospho-acceptor) domain 673 738 1.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SMART SM00448 994 1108 2.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 786 895 3.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 SUPERFAMILY SSF53850 273 492 1.74E-14 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 Gene3D G3DSA:3.40.190.10 274 485 1.7E-20 T 14-10-2018 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 835 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 880 893 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 849 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1512 ab2b713316fad5eab9f6483f8aabb137 1217 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 874 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1691 ff987a83e95d95722063084d8afca03b 276 Pfam PF00809 Pterin binding enzyme 18 257 2.2E-92 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1691 ff987a83e95d95722063084d8afca03b 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1691 ff987a83e95d95722063084d8afca03b 276 SUPERFAMILY SSF51717 4 274 3.4E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1691 ff987a83e95d95722063084d8afca03b 276 Gene3D G3DSA:3.20.20.20 2 276 1.2E-113 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV1_1691 ff987a83e95d95722063084d8afca03b 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 8.7E-105 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 VV1_1691 ff987a83e95d95722063084d8afca03b 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Pfam PF04324 BFD-like [2Fe-2S] binding domain 414 462 4.3E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00397 Sirohaem Fe-binding site signature 670 688 8.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00397 Sirohaem Fe-binding site signature 627 645 8.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 SUPERFAMILY SSF56014 624 799 9.03E-51 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Gene3D G3DSA:3.30.413.10 622 788 1.4E-35 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 1.1E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 SUPERFAMILY SSF55124 493 632 9.32E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Gene3D G3DSA:3.50.50.60 108 243 6.4E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Gene3D G3DSA:3.50.50.60 5 280 6.4E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 8.6E-16 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 8.6E-16 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.6E-16 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 8.6E-16 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 8.6E-16 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 1.3E-10 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 1.3E-10 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 1.3E-10 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.3E-10 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 SUPERFAMILY SSF51905 3 189 5.13E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Gene3D G3DSA:1.10.10.1100 414 468 3.0E-12 T 14-10-2018 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 551 612 5.9E-11 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 791 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 SUPERFAMILY SSF51905 147 305 6.2E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 PIRSF PIRSF037149 1 826 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 623 748 2.5E-19 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV2_0390 5f353d74750ebdfd158503358be5b4cf 827 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 670 686 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 Gene3D G3DSA:2.60.40.10 293 402 1.0E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 232 243 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 83 98 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 231 243 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 139 153 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 Gene3D G3DSA:2.40.10.10 67 276 7.8E-61 T 14-10-2018 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 SMART SM00495 489 540 7.6E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 SMART SM00495 411 456 1.4E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 SUPERFAMILY SSF51055 407 457 1.83E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 Pfam PF00089 Trypsin 55 279 4.6E-51 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 SMART SM00020 54 281 1.7E-65 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 SUPERFAMILY SSF50494 22 286 4.52E-65 T 14-10-2018 IPR009003 Peptidase S1, PA clan VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 Gene3D G3DSA:2.10.10.20 411 454 3.6E-15 T 14-10-2018 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 93 98 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV1_2725 b17f596e63eeae9adba67b59eea8b0c1 544 Gene3D G3DSA:2.40.10.10 55 275 7.8E-61 T 14-10-2018 VV2_0825 43d3bb7f959e6414f435e2bf0741e792 496 Gene3D G3DSA:1.10.287.950 164 496 9.5E-64 T 14-10-2018 VV2_0825 43d3bb7f959e6414f435e2bf0741e792 496 SMART SM00304 165 219 4.7E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0825 43d3bb7f959e6414f435e2bf0741e792 496 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 460 6.9E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0825 43d3bb7f959e6414f435e2bf0741e792 496 SUPERFAMILY SSF58104 187 495 1.7E-63 T 14-10-2018 VV2_0825 43d3bb7f959e6414f435e2bf0741e792 496 SMART SM00283 234 495 2.4E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 Pfam PF03466 LysR substrate binding domain 100 300 8.6E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 SUPERFAMILY SSF46785 8 88 2.27E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 Gene3D G3DSA:3.40.190.10 175 273 1.1E-55 T 14-10-2018 VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 Gene3D G3DSA:3.40.190.10 94 298 1.1E-55 T 14-10-2018 VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 Gene3D G3DSA:1.10.10.10 4 92 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 7.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 7.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 7.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 SUPERFAMILY SSF53850 94 300 3.08E-41 T 14-10-2018 VV2_1503 9963fc8b8f711753a15942e32a1f31ac 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 2.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0759 2e3deaf34a3facc0cc07e35c89383571 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 1.0E-45 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VV2_0759 2e3deaf34a3facc0cc07e35c89383571 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 3.5E-42 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VV2_0759 2e3deaf34a3facc0cc07e35c89383571 104 PIRSF PIRSF028773 1 104 6.3E-46 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VV2_0759 2e3deaf34a3facc0cc07e35c89383571 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.397 T 14-10-2018 IPR007458 Protein of unknown function DUF496 VV1_2282 57ce18bc710d4bd5eead89a8dca1cd8e 519 PIRSF PIRSF028991 5 514 4.9E-287 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VV1_2282 57ce18bc710d4bd5eead89a8dca1cd8e 519 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 1.7E-226 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VV1_2282 57ce18bc710d4bd5eead89a8dca1cd8e 519 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 502 2.0E-240 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VV1_2282 57ce18bc710d4bd5eead89a8dca1cd8e 519 SUPERFAMILY SSF51998 24 468 1.46E-88 T 14-10-2018 VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 Pfam PF00265 Thymidine kinase 2 186 3.1E-59 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.921 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 Gene3D G3DSA:3.30.60.20 144 189 1.3E-7 T 14-10-2018 VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 PIRSF PIRSF035805 1 192 5.1E-57 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 SUPERFAMILY SSF52540 2 141 2.09E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 SUPERFAMILY SSF57716 142 190 7.6E-17 T 14-10-2018 VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VV1_2907 c770879ac9e0802c06b3850c156e5b6e 192 Gene3D G3DSA:3.40.50.300 2 140 7.1E-24 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 Gene3D G3DSA:1.10.287.470 168 195 2.7E-8 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 Pfam PF13437 HlyD family secretion protein 195 274 2.5E-6 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 Gene3D G3DSA:2.40.50.100 32 65 7.1E-8 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 Gene3D G3DSA:2.40.50.100 196 230 2.7E-8 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 SUPERFAMILY SSF111369 100 157 1.23E-6 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 SUPERFAMILY SSF111369 34 87 3.79E-5 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 Pfam PF13533 Biotin-lipoyl like 44 77 1.7E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_0597 4123cb94604c478b18a9f4889d386868 316 Gene3D G3DSA:1.10.287.470 66 86 7.1E-8 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 Gene3D G3DSA:1.10.287.470 97 161 7.1E-12 T 14-10-2018 VV2_0597 4123cb94604c478b18a9f4889d386868 316 Gene3D G3DSA:2.40.30.170 231 307 2.7E-8 T 14-10-2018 VV1_0488 9f0de220203405e3447363086866e436 183 SUPERFAMILY SSF52972 9 178 3.84E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_0488 9f0de220203405e3447363086866e436 183 Pfam PF01931 Protein of unknown function DUF84 14 172 1.1E-54 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VV1_0488 9f0de220203405e3447363086866e436 183 Gene3D G3DSA:3.90.950.10 2 181 2.0E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_0488 9f0de220203405e3447363086866e436 183 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 13 177 3.4E-44 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase VV1_0488 9f0de220203405e3447363086866e436 183 Hamap MF_00648 Non-canonical purine NTP phosphatase. 9 178 29.145 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Pfam PF01467 Cytidylyltransferase-like 10 138 1.1E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 2.5E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Gene3D G3DSA:3.40.50.620 1 164 1.1E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.682 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 1.3E-59 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 7.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 7.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 7.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 7.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 7.0E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VV1_0819 f74e072e7a4e4fb2cebdf46d7ee0f8b0 164 SUPERFAMILY SSF52374 8 162 9.65E-46 T 14-10-2018 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 SUPERFAMILY SSF64518 1 384 9.81E-97 T 14-10-2018 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:1.20.1330.10 44 333 6.3E-75 T 14-10-2018 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:1.10.8.410 334 384 1.2E-21 T 14-10-2018 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00700 Bacterial flagellin C-terminal helical region 298 383 1.6E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 Gene3D G3DSA:3.30.70.2120 174 282 6.3E-75 T 14-10-2018 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 76 95 1.0E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 37 54 1.0E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 PRINTS PR00207 Flagellin signature 111 134 1.0E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0215 9c269bcc4881d0014e9ebd6fd668f785 385 Pfam PF07196 Flagellin hook IN motif 209 252 2.0E-8 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 SUPERFAMILY SSF51230 1 89 1.7E-21 T 14-10-2018 IPR011053 Single hybrid motif VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 405 635 2.1E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 SUPERFAMILY SSF47005 322 367 1.12E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Gene3D G3DSA:3.30.559.10 389 636 3.3E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Gene3D G3DSA:2.40.50.100 105 182 1.2E-20 T 14-10-2018 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Gene3D G3DSA:2.40.50.100 1 79 6.4E-20 T 14-10-2018 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 228 257 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Pfam PF02817 e3 binding domain 329 363 3.3E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 SUPERFAMILY SSF52777 394 635 3.38E-81 T 14-10-2018 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 SUPERFAMILY SSF51230 205 297 4.45E-23 T 14-10-2018 IPR011053 Single hybrid motif VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Gene3D G3DSA:4.10.320.10 328 373 1.1E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Pfam PF00364 Biotin-requiring enzyme 107 176 6.8E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Pfam PF00364 Biotin-requiring enzyme 206 276 2.3E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Pfam PF00364 Biotin-requiring enzyme 4 73 6.1E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 183 636 4.7E-211 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 Gene3D G3DSA:2.40.50.100 206 282 1.4E-20 T 14-10-2018 VV1_1631 46c1b71a0084119259eda7aecf5052cc 636 SUPERFAMILY SSF51230 105 197 1.57E-22 T 14-10-2018 IPR011053 Single hybrid motif VV2_0103 91f97be2407dae42849a7fac1c982395 519 SUPERFAMILY SSF55785 204 295 1.9E-5 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0103 91f97be2407dae42849a7fac1c982395 519 Gene3D G3DSA:3.30.450.20 197 306 8.3E-10 T 14-10-2018 VV2_0103 91f97be2407dae42849a7fac1c982395 519 Gene3D G3DSA:3.30.565.10 365 517 1.0E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0103 91f97be2407dae42849a7fac1c982395 519 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 314 357 7.6E-8 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain VV2_0103 91f97be2407dae42849a7fac1c982395 519 SUPERFAMILY SSF103190 36 161 1.53E-30 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_0103 91f97be2407dae42849a7fac1c982395 519 Gene3D G3DSA:3.30.450.20 29 161 2.8E-35 T 14-10-2018 VV2_0103 91f97be2407dae42849a7fac1c982395 519 SUPERFAMILY SSF55890 317 386 1.57E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VV2_0103 91f97be2407dae42849a7fac1c982395 519 SMART SM00387 412 519 5.9E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0103 91f97be2407dae42849a7fac1c982395 519 SMART SM00091 210 279 0.0064 T 14-10-2018 IPR000014 PAS domain VV2_0103 91f97be2407dae42849a7fac1c982395 519 SUPERFAMILY SSF55874 382 518 1.44E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0103 91f97be2407dae42849a7fac1c982395 519 Pfam PF17203 Single cache domain 3 33 157 3.6E-19 T 14-10-2018 IPR033463 Single cache domain 3 VV2_0103 91f97be2407dae42849a7fac1c982395 519 Pfam PF14501 GHKL domain 413 516 3.4E-15 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.3E-71 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 SUPERFAMILY SSF82714 704 788 7.06E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 SUPERFAMILY SSF82693 40 134 6.28E-25 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 SUPERFAMILY SSF82714 183 266 1.83E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 SUPERFAMILY SSF82866 290 489 4.45E-46 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.9E-277 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 SUPERFAMILY SSF82866 794 1011 2.49E-49 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 SUPERFAMILY SSF82693 554 657 5.75E-17 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 SUPERFAMILY SSF82693 139 324 3.4E-19 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 14-10-2018 VV1_3156 6fdb99bf2958189286d6afb9fb612135 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.70.1320 135 327 3.8E-258 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.2090.10 178 268 3.8E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.4E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Pfam PF00873 AcrB/AcrD/AcrF family 9 1021 1.9E-169 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82866 289 490 2.35E-41 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 41 133 2.17E-22 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.70.1430 41 799 3.8E-258 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:1.20.1640.10 12 509 3.8E-258 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.70.1440 652 849 3.8E-258 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.2090.10 703 791 3.8E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82693 147 325 4.39E-13 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:3.30.70.1430 565 651 3.8E-258 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82866 787 1023 2.62E-49 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 Gene3D G3DSA:1.20.1640.10 510 1018 3.8E-258 T 14-10-2018 VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82714 184 263 1.18E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_1681 880387fd3b88135263ee4bc2b4e4a973 1060 SUPERFAMILY SSF82714 706 788 4.05E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_3008 43621eecd528fb806cc89fdcfb97de2a 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.0E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VV1_3008 43621eecd528fb806cc89fdcfb97de2a 78 SUPERFAMILY SSF47336 2 76 1.27E-23 T 14-10-2018 IPR036736 ACP-like superfamily VV1_3008 43621eecd528fb806cc89fdcfb97de2a 78 Gene3D G3DSA:1.10.1200.10 1 75 1.8E-29 T 14-10-2018 IPR036736 ACP-like superfamily VV1_3008 43621eecd528fb806cc89fdcfb97de2a 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VV1_3008 43621eecd528fb806cc89fdcfb97de2a 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 4.7E-36 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VV1_3008 43621eecd528fb806cc89fdcfb97de2a 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.776 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Gene3D G3DSA:3.90.226.10 880 1088 7.4E-48 T 14-10-2018 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF03572 Peptidase family S41 903 1057 7.2E-20 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 SMART SM00245 864 1059 2.5E-4 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Gene3D G3DSA:2.120.10.60 30 321 4.6E-53 T 14-10-2018 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Gene3D G3DSA:2.120.10.60 334 410 5.0E-7 T 14-10-2018 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF14685 Tricorn protease PDZ domain 822 863 3.2E-6 T 14-10-2018 IPR029414 Tricorn protease, PDZ domain VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 73 105 7.1E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 370 404 4.4E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 517 548 2.8E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 229 264 3.3E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF07676 WD40-like Beta Propeller Repeat 43 56 0.059 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 SUPERFAMILY SSF52096 708 1085 1.23E-59 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Gene3D G3DSA:2.120.10.30 411 590 2.3E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Gene3D G3DSA:2.30.42.10 800 879 2.2E-8 T 14-10-2018 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Gene3D G3DSA:3.30.750.44 708 778 3.1E-14 T 14-10-2018 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 SUPERFAMILY SSF69304 42 306 8.89E-36 T 14-10-2018 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 Pfam PF14684 Tricorn protease C1 domain 711 778 2.0E-25 T 14-10-2018 IPR028204 Tricorn protease C1 domain VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 PIRSF PIRSF036421 28 1088 2.0E-203 T 14-10-2018 IPR012393 Tricorn protease GO:0008236 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 SMART SM00228 789 862 1.1E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 SUPERFAMILY SSF50156 793 871 5.78E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV2_1529 14faca3cdcb21cef86f5ceef75ed91fd 1088 SUPERFAMILY SSF82171 157 544 1.53E-32 T 14-10-2018 VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00448 3 116 1.0E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:3.40.50.2300 1 126 5.6E-39 T 14-10-2018 VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.9E-113 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 SUPERFAMILY SSF52172 3 184 1.81E-43 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 SMART SM00862 150 225 2.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 Pfam PF00072 Response regulator receiver domain 5 116 7.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0468 e0b0cdf3ff7666562ac5749d6b266cfe 229 Gene3D G3DSA:1.10.10.10 127 228 1.8E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2614 f013642d0a7868d3078b5b9715661238 789 Gene3D G3DSA:3.40.1110.10 511 614 1.1E-66 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VV1_2614 f013642d0a7868d3078b5b9715661238 789 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 1.7E-152 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 SUPERFAMILY SSF81653 318 402 3.14E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VV1_2614 f013642d0a7868d3078b5b9715661238 789 Pfam PF00122 E1-E2 ATPase 318 478 2.6E-44 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 Gene3D G3DSA:3.30.70.100 90 173 2.0E-13 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.7E-5 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.7E-5 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.7E-5 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.7E-5 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 274 785 3.3E-123 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VV1_2614 f013642d0a7868d3078b5b9715661238 789 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 9.9E-30 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 SUPERFAMILY SSF81665 251 743 8.76E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VV1_2614 f013642d0a7868d3078b5b9715661238 789 Pfam PF00403 Heavy-metal-associated domain 96 154 1.6E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV1_2614 f013642d0a7868d3078b5b9715661238 789 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 4.3E-27 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VV1_2614 f013642d0a7868d3078b5b9715661238 789 Gene3D G3DSA:3.40.50.1000 482 719 1.1E-66 T 14-10-2018 IPR023214 HAD superfamily VV1_2614 f013642d0a7868d3078b5b9715661238 789 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 1.6E-160 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VV1_2614 f013642d0a7868d3078b5b9715661238 789 Gene3D G3DSA:2.70.150.20 292 407 2.3E-31 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 SUPERFAMILY SSF56784 500 781 1.45E-47 T 14-10-2018 IPR036412 HAD-like superfamily VV1_2614 f013642d0a7868d3078b5b9715661238 789 SUPERFAMILY SSF55008 84 162 1.96E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VV1_2614 f013642d0a7868d3078b5b9715661238 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 3.8E-72 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 5.1E-24 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 5.1E-24 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.1E-24 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 5.1E-24 T 14-10-2018 VV1_2614 f013642d0a7868d3078b5b9715661238 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.1E-24 T 14-10-2018 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 Pfam PF13377 Periplasmic binding protein-like domain 180 339 3.0E-26 T 14-10-2018 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 Gene3D G3DSA:1.10.260.40 5 70 1.2E-21 T 14-10-2018 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 SMART SM00354 12 82 1.0E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 Gene3D G3DSA:3.40.50.2300 74 318 8.0E-77 T 14-10-2018 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 SUPERFAMILY SSF47413 12 70 1.13E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 Gene3D G3DSA:3.40.50.2300 168 301 8.0E-77 T 14-10-2018 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 14-10-2018 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.6E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0859 0038bcb90891fa92fea906a581d7a3f1 343 SUPERFAMILY SSF53822 70 327 1.31E-47 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_0530 48500c2d0ed6ee943fae46e2e8c21c9b 375 Gene3D G3DSA:2.40.420.20 277 368 1.2E-19 T 14-10-2018 VV2_0530 48500c2d0ed6ee943fae46e2e8c21c9b 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 368 1.1E-79 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV2_0530 48500c2d0ed6ee943fae46e2e8c21c9b 375 Gene3D G3DSA:1.10.287.470 93 166 1.0E-74 T 14-10-2018 VV2_0530 48500c2d0ed6ee943fae46e2e8c21c9b 375 Gene3D G3DSA:2.40.50.100 58 201 1.0E-74 T 14-10-2018 VV2_0530 48500c2d0ed6ee943fae46e2e8c21c9b 375 SUPERFAMILY SSF111369 50 291 1.44E-63 T 14-10-2018 VV2_0530 48500c2d0ed6ee943fae46e2e8c21c9b 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 283 2.4E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV2_0530 48500c2d0ed6ee943fae46e2e8c21c9b 375 Gene3D G3DSA:2.40.30.170 52 276 1.0E-74 T 14-10-2018 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 Pfam PF08447 PAS fold 28 112 1.5E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 SMART SM00283 256 514 3.4E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 481 4.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 SMART SM00091 5 72 0.0059 T 14-10-2018 IPR000014 PAS domain VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 267 296 2.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 2.2E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 SUPERFAMILY SSF55785 17 112 1.42E-24 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 SUPERFAMILY SSF58104 259 513 4.97E-70 T 14-10-2018 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 Gene3D G3DSA:1.10.287.950 195 514 5.8E-62 T 14-10-2018 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 Gene3D G3DSA:3.30.450.20 7 147 8.0E-25 T 14-10-2018 VV2_0372 a4b56bf5e676e66b67f5db34a9eb9730 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 109 7.9E-10 T 14-10-2018 IPR000014 PAS domain VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 3.7E-182 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 Pfam PF01546 Peptidase family M20/M25/M40 77 477 6.5E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 Pfam PF07687 Peptidase dimerisation domain 211 296 3.9E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 Gene3D G3DSA:3.40.630.10 1 230 1.2E-64 T 14-10-2018 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 Gene3D G3DSA:3.40.630.10 370 490 1.1E-23 T 14-10-2018 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 8.2E-88 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 PIRSF PIRSF016599 5 489 4.5E-217 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VV1_0333 7c2eefd6b702068a67fea65f8f93ee61 490 SUPERFAMILY SSF53187 15 486 4.98E-62 T 14-10-2018 VV1_1643 c5ba7ea63f83d27aa50d7c8507693898 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 1.1E-113 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VV1_1643 c5ba7ea63f83d27aa50d7c8507693898 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.2E-107 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VV1_1643 c5ba7ea63f83d27aa50d7c8507693898 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.058 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VV1_1643 c5ba7ea63f83d27aa50d7c8507693898 264 PIRSF PIRSF000388 1 264 2.5E-100 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VV1_1643 c5ba7ea63f83d27aa50d7c8507693898 264 Gene3D G3DSA:3.20.20.60 1 263 1.5E-104 T 14-10-2018 VV1_1643 c5ba7ea63f83d27aa50d7c8507693898 264 SUPERFAMILY SSF51621 3 262 1.02E-104 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_0294 2558d5d5e668eb117f88d88ed2e15bdd 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 8.1E-124 T 14-10-2018 IPR004872 Lipoprotein NlpA family VV1_0294 2558d5d5e668eb117f88d88ed2e15bdd 269 Gene3D G3DSA:3.40.190.10 115 219 6.2E-94 T 14-10-2018 VV1_0294 2558d5d5e668eb117f88d88ed2e15bdd 269 Pfam PF03180 NLPA lipoprotein 33 269 6.2E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family VV1_0294 2558d5d5e668eb117f88d88ed2e15bdd 269 Gene3D G3DSA:3.40.190.10 34 263 6.2E-94 T 14-10-2018 VV1_0294 2558d5d5e668eb117f88d88ed2e15bdd 269 SUPERFAMILY SSF53850 32 269 4.27E-80 T 14-10-2018 VV1_0294 2558d5d5e668eb117f88d88ed2e15bdd 269 PIRSF PIRSF002854 1 269 7.8E-100 T 14-10-2018 IPR004872 Lipoprotein NlpA family VV1_3150 298ecc83a6b3e91aeca025b269cb18e6 288 Gene3D G3DSA:3.10.129.90 2 285 4.8E-105 T 14-10-2018 VV1_3150 298ecc83a6b3e91aeca025b269cb18e6 288 Pfam PF13622 Thioesterase-like superfamily 33 282 1.0E-59 T 14-10-2018 VV1_3150 298ecc83a6b3e91aeca025b269cb18e6 288 SUPERFAMILY SSF54637 116 283 7.88E-59 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_3150 298ecc83a6b3e91aeca025b269cb18e6 288 SUPERFAMILY SSF54637 6 114 3.28E-39 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_3150 298ecc83a6b3e91aeca025b269cb18e6 288 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.2E-93 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 SUPERFAMILY SSF51735 1 113 5.91E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2702 8a4d125490ebbd71a16566483a11552f 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 206 3.8E-14 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 Gene3D G3DSA:3.30.160.110 114 149 2.5E-13 T 14-10-2018 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 Gene3D G3DSA:3.40.1010.10 211 306 6.6E-6 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 SUPERFAMILY SSF75615 115 201 7.85E-23 T 14-10-2018 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 197 9.7E-62 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 Pfam PF13241 Putative NAD(P)-binding 6 116 5.8E-30 T 14-10-2018 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 SUPERFAMILY SSF53790 224 288 5.23E-5 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 Gene3D G3DSA:1.10.8.210 150 207 5.6E-9 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 Gene3D G3DSA:3.40.50.720 1 113 8.4E-34 T 14-10-2018 VV1_2702 8a4d125490ebbd71a16566483a11552f 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 3.1E-6 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV1_0725 f84de9320db3588cf317357ff202f51d 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 3.5E-200 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VV1_0725 f84de9320db3588cf317357ff202f51d 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_0725 f84de9320db3588cf317357ff202f51d 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 219 4.5E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0725 f84de9320db3588cf317357ff202f51d 476 Gene3D G3DSA:2.40.30.10 331 434 1.7E-30 T 14-10-2018 VV1_0725 f84de9320db3588cf317357ff202f51d 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 216 1.0E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_0725 f84de9320db3588cf317357ff202f51d 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.02 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VV1_0725 f84de9320db3588cf317357ff202f51d 476 SUPERFAMILY SSF50465 332 433 6.23E-31 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VV1_0725 f84de9320db3588cf317357ff202f51d 476 Gene3D G3DSA:3.40.50.300 5 239 1.4E-73 T 14-10-2018 VV1_0725 f84de9320db3588cf317357ff202f51d 476 SUPERFAMILY SSF52540 19 234 1.55E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0725 f84de9320db3588cf317357ff202f51d 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0725 f84de9320db3588cf317357ff202f51d 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0725 f84de9320db3588cf317357ff202f51d 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0725 f84de9320db3588cf317357ff202f51d 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0725 f84de9320db3588cf317357ff202f51d 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_0725 f84de9320db3588cf317357ff202f51d 476 Gene3D G3DSA:2.40.30.10 241 327 3.2E-27 T 14-10-2018 VV1_0725 f84de9320db3588cf317357ff202f51d 476 SUPERFAMILY SSF50447 242 327 3.53E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 SUPERFAMILY SSF52540 5 262 4.9E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 275 1.1E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 527 555 0.0079 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 Pfam PF00005 ABC transporter 26 191 1.8E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 Pfam PF00005 ABC transporter 318 476 2.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 Gene3D G3DSA:3.40.50.300 3 291 1.1E-78 T 14-10-2018 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 Gene3D G3DSA:3.40.50.300 292 566 4.5E-75 T 14-10-2018 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 SUPERFAMILY SSF52540 292 547 1.89E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 SMART SM00382 34 241 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1100 27d28932f8ffe0053f7b3ad5ef532dd5 566 SMART SM00382 326 524 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 Gene3D G3DSA:3.40.30.60 366 509 1.3E-53 T 14-10-2018 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 149 172 - T 14-10-2018 IPR025505 FHIPEP conserved site VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 Gene3D G3DSA:1.10.8.540 510 597 3.9E-24 T 14-10-2018 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 6.2E-264 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 144 160 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 193 210 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 244 258 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 40 53 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 77 96 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 163 181 1.8E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 Pfam PF00771 FHIPEP family 34 690 8.7E-269 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 PIRSF PIRSF005419 11 700 1.5E-251 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VV1_1949 3421e22c63ee5bb911c5a001ab45ff9c 700 Gene3D G3DSA:1.10.490.80 601 698 3.0E-14 T 14-10-2018 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.9E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.3E-54 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 Gene3D G3DSA:3.10.420.10 4 155 3.0E-57 T 14-10-2018 IPR035958 SecB-like superfamily VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.672 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 147 2.6E-58 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VV1_1278 02e9025bcbcda04d8fac48d21256ca1d 155 SUPERFAMILY SSF54611 4 143 2.18E-51 T 14-10-2018 IPR035958 SecB-like superfamily VV1_3077 9fb9e7903a855491b27373f351dbafb7 316 SUPERFAMILY SSF47616 163 312 1.81E-36 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV1_3077 9fb9e7903a855491b27373f351dbafb7 316 Gene3D G3DSA:1.20.1050.10 168 316 6.6E-70 T 14-10-2018 VV1_3077 9fb9e7903a855491b27373f351dbafb7 316 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 7.2E-23 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV1_3077 9fb9e7903a855491b27373f351dbafb7 316 Gene3D G3DSA:3.40.30.130 1 167 4.2E-67 T 14-10-2018 VV1_3077 9fb9e7903a855491b27373f351dbafb7 316 SUPERFAMILY SSF52833 31 150 3.44E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_3077 9fb9e7903a855491b27373f351dbafb7 316 PIRSF PIRSF015753 5 312 3.3E-136 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VV1_3077 9fb9e7903a855491b27373f351dbafb7 316 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 1.0E-13 T 14-10-2018 VV1_3089 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Gene3D G3DSA:3.40.50.12300 5 296 4.6E-80 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily VV1_3089 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 283 1.3E-103 T 14-10-2018 IPR010119 Gluconeogenesis factor VV1_3089 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 2.6E-75 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VV1_3089 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.879 T 14-10-2018 IPR010119 Gluconeogenesis factor VV1_3089 0d4fe8f4d3cda7c2703a0a08dd7b0387 296 SUPERFAMILY SSF142338 7 290 7.06E-83 T 14-10-2018 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Gene3D G3DSA:1.20.58.850 621 831 1.6E-133 T 14-10-2018 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Gene3D G3DSA:3.40.1140.10 1383 1469 1.5E-38 T 14-10-2018 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Gene3D G3DSA:3.40.1140.10 1 227 1.5E-98 T 14-10-2018 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Gene3D G3DSA:1.20.1060.30 668 779 1.6E-133 T 14-10-2018 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 11.123 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Pfam PF16330 MukB hinge domain 646 811 1.5E-71 T 14-10-2018 IPR032520 MukB, hinge domain VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 SUPERFAMILY SSF52540 26 224 2.66E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 SUPERFAMILY SSF52540 21 1434 8.39E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 PIRSF PIRSF005246 1 1487 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Pfam PF04310 MukB N-terminal 2 227 1.8E-121 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.3E-14 T 14-10-2018 VV1_2145 9c1b2f2bbdb584eb98d9e33e42167cfd 1487 Gene3D G3DSA:1.20.58.850 583 853 1.6E-133 T 14-10-2018 VV1_1470 468950835bf7d8939a627f66015f96d9 164 SUPERFAMILY SSF55729 5 162 6.69E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1470 468950835bf7d8939a627f66015f96d9 164 Pfam PF00583 Acetyltransferase (GNAT) family 43 141 8.4E-13 T 14-10-2018 IPR000182 GNAT domain VV1_1470 468950835bf7d8939a627f66015f96d9 164 Gene3D G3DSA:3.40.630.30 6 164 1.7E-23 T 14-10-2018 VV2_1177 8cae95d11eb59b007f94e03332f53388 321 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1177 8cae95d11eb59b007f94e03332f53388 321 Pfam PF00005 ABC transporter 41 195 7.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1177 8cae95d11eb59b007f94e03332f53388 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 275 3.9E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_1177 8cae95d11eb59b007f94e03332f53388 321 Gene3D G3DSA:3.40.50.300 14 318 3.9E-80 T 14-10-2018 VV2_1177 8cae95d11eb59b007f94e03332f53388 321 SUPERFAMILY SSF52540 16 265 1.98E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1177 8cae95d11eb59b007f94e03332f53388 321 SMART SM00382 50 244 6.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0492 4d5e7f9ffcbafe4e6e10f41683464fd2 124 Gene3D G3DSA:2.40.10.220 1 123 5.0E-32 T 14-10-2018 VV1_0492 4d5e7f9ffcbafe4e6e10f41683464fd2 124 PIRSF PIRSF028141 1 120 3.6E-43 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type VV1_0492 4d5e7f9ffcbafe4e6e10f41683464fd2 124 Pfam PF07238 PilZ domain 3 100 3.2E-15 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VV1_0492 4d5e7f9ffcbafe4e6e10f41683464fd2 124 SUPERFAMILY SSF141371 1 120 2.55E-33 T 14-10-2018 VV1_1656 0d982e11784c1fefebbdabb9c405cef9 398 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 378 2.6E-20 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VV1_1656 0d982e11784c1fefebbdabb9c405cef9 398 Pfam PF05651 Putative sugar diacid recognition 3 136 2.9E-53 T 14-10-2018 IPR008599 Putative sugar diacid recognition VV1_1656 0d982e11784c1fefebbdabb9c405cef9 398 Gene3D G3DSA:1.10.10.2840 255 385 1.0E-19 T 14-10-2018 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Pfam PF02010 REJ domain 604 738 2.5E-6 T 14-10-2018 IPR002859 PKD/REJ-like domain VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SUPERFAMILY SSF81296 21 133 1.68E-32 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Gene3D G3DSA:3.10.50.10 466 551 1.4E-173 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SMART SM00636 159 575 2.0E-162 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SUPERFAMILY SSF51055 784 841 1.57E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SUPERFAMILY SSF54556 461 546 2.33E-17 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Gene3D G3DSA:3.20.20.80 162 577 1.4E-173 T 14-10-2018 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Pfam PF00704 Glycosyl hydrolases family 18 161 575 5.1E-88 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SMART SM00495 794 839 4.4E-14 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Gene3D G3DSA:2.60.40.10 696 784 4.2E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Gene3D G3DSA:2.10.10.20 794 837 7.4E-17 T 14-10-2018 VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SUPERFAMILY SSF51445 135 588 3.79E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Gene3D G3DSA:2.60.40.10 22 132 2.2E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SMART SM00089 700 786 0.45 T 14-10-2018 IPR022409 PKD/Chitinase domain VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SMART SM00089 51 134 3.8 T 14-10-2018 IPR022409 PKD/Chitinase domain VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SMART SM00089 600 690 8.3E-6 T 14-10-2018 IPR022409 PKD/Chitinase domain VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 SUPERFAMILY SSF49299 596 688 2.43E-8 T 14-10-2018 IPR035986 PKD domain superfamily VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Gene3D G3DSA:2.60.40.10 596 695 1.2E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1217 55848c4a3317b8f403f7043179bcad9d 845 Pfam PF08329 Chitinase A, N-terminal domain 21 156 2.3E-55 T 14-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VV1_0937 b0f9c75157877c3206a06719a952484b 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.1E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_0937 b0f9c75157877c3206a06719a952484b 419 SMART SM00959 5 47 1.3E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VV1_0937 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:1.10.720.10 1 47 5.6E-23 T 14-10-2018 VV1_0937 b0f9c75157877c3206a06719a952484b 419 SMART SM00382 170 355 9.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0937 b0f9c75157877c3206a06719a952484b 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.4E-220 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VV1_0937 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:3.40.50.300 130 417 2.0E-134 T 14-10-2018 VV1_0937 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF52540 90 371 1.6E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0937 b0f9c75157877c3206a06719a952484b 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 14-10-2018 VV1_0937 b0f9c75157877c3206a06719a952484b 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.4E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VV1_0937 b0f9c75157877c3206a06719a952484b 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 253.558 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VV1_0937 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF68912 1 46 2.24E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VV1_0937 b0f9c75157877c3206a06719a952484b 419 SUPERFAMILY SSF50249 48 125 7.42E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0937 b0f9c75157877c3206a06719a952484b 419 SMART SM00357 52 118 1.7E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV1_0937 b0f9c75157877c3206a06719a952484b 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 7.7E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VV1_1352 1182860fec68453a478cde89bc14cc43 173 Gene3D G3DSA:3.50.30.40 1 161 3.0E-63 T 14-10-2018 VV1_1352 1182860fec68453a478cde89bc14cc43 173 Pfam PF03737 Aldolase/RraA 6 152 2.1E-40 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV1_1352 1182860fec68453a478cde89bc14cc43 173 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 8.5E-69 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VV1_1352 1182860fec68453a478cde89bc14cc43 173 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.777 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VV1_1352 1182860fec68453a478cde89bc14cc43 173 SUPERFAMILY SSF89562 2 158 6.02E-48 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VV1_1352 1182860fec68453a478cde89bc14cc43 173 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 1.6E-81 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VV1_1116 cfad2a70c58588c6640cbf54f9d0a0cd 175 Pfam PF00210 Ferritin-like domain 8 143 7.3E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VV1_1116 cfad2a70c58588c6640cbf54f9d0a0cd 175 Gene3D G3DSA:1.20.1260.10 1 175 1.0E-52 T 14-10-2018 IPR012347 Ferritin-like VV1_1116 cfad2a70c58588c6640cbf54f9d0a0cd 175 SUPERFAMILY SSF47240 1 160 3.57E-58 T 14-10-2018 IPR009078 Ferritin-like superfamily VV1_1557 cf94e5abcf860c05958c00651f5e8c00 86 SUPERFAMILY SSF109910 2 79 6.15E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VV1_1557 cf94e5abcf860c05958c00651f5e8c00 86 Gene3D G3DSA:1.10.150.250 1 86 5.4E-37 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VV1_1557 cf94e5abcf860c05958c00651f5e8c00 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.4E-24 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase VV1_2785 97110a3d59b6e4954ca985fd07083d94 212 SMART SM00855 2 151 2.6E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VV1_2785 97110a3d59b6e4954ca985fd07083d94 212 Gene3D G3DSA:3.40.50.1240 1 210 1.3E-52 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VV1_2785 97110a3d59b6e4954ca985fd07083d94 212 SUPERFAMILY SSF53254 1 184 6.85E-36 T 14-10-2018 IPR029033 Histidine phosphatase superfamily VV1_2785 97110a3d59b6e4954ca985fd07083d94 212 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 183 7.7E-38 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VV1_2785 97110a3d59b6e4954ca985fd07083d94 212 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 179 1.2E-50 T 14-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VV1_1293 1a63b763f0d254631b870d82f5cb1486 315 Pfam PF01715 IPP transferase 42 286 5.9E-87 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VV1_1293 1a63b763f0d254631b870d82f5cb1486 315 Gene3D G3DSA:1.10.20.140 115 186 2.5E-106 T 14-10-2018 VV1_1293 1a63b763f0d254631b870d82f5cb1486 315 SUPERFAMILY SSF52540 10 153 4.79E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1293 1a63b763f0d254631b870d82f5cb1486 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 8.1E-116 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VV1_1293 1a63b763f0d254631b870d82f5cb1486 315 Gene3D G3DSA:3.40.50.300 12 292 2.5E-106 T 14-10-2018 VV1_1293 1a63b763f0d254631b870d82f5cb1486 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 308 29.866 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VV2_1294 a2be917e667b7aa5b5ef1102daa8a97d 317 Gene3D G3DSA:3.40.50.300 1 317 7.7E-95 T 14-10-2018 VV2_1294 a2be917e667b7aa5b5ef1102daa8a97d 317 SMART SM00382 33 230 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1294 a2be917e667b7aa5b5ef1102daa8a97d 317 Pfam PF00005 ABC transporter 24 180 5.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1294 a2be917e667b7aa5b5ef1102daa8a97d 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 9.6E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_1294 a2be917e667b7aa5b5ef1102daa8a97d 317 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1294 a2be917e667b7aa5b5ef1102daa8a97d 317 SUPERFAMILY SSF52540 4 251 7.73E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1294 a2be917e667b7aa5b5ef1102daa8a97d 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 6.9E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 Gene3D G3DSA:3.50.50.60 10 404 6.0E-155 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 Gene3D G3DSA:3.90.700.10 248 358 6.0E-155 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 8.8E-213 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 SUPERFAMILY SSF56425 238 353 5.83E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 Gene3D G3DSA:1.20.58.100 425 535 1.9E-44 T 14-10-2018 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.0E-8 T 14-10-2018 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.0E-8 T 14-10-2018 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 SUPERFAMILY SSF46977 426 525 3.4E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 SUPERFAMILY SSF51905 5 447 1.62E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 PIRSF PIRSF000171 1 273 5.8E-26 T 14-10-2018 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 PIRSF PIRSF000171 332 530 3.6E-14 T 14-10-2018 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 6.4E-15 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1558 e66a8855c5bb38be0608d94dc9fab835 535 Pfam PF00890 FAD binding domain 10 392 9.5E-103 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF54631 138 278 1.15E-25 T 14-10-2018 VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 8.4E-88 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:3.10.580.10 135 262 5.0E-36 T 14-10-2018 VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:1.10.357.20 277 451 6.3E-45 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00924 36 139 2.8E-36 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF00571 CBS domain 217 257 9.1E-4 T 14-10-2018 IPR000644 CBS domain VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF00571 CBS domain 140 189 0.0014 T 14-10-2018 IPR000644 CBS domain VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF03448 MgtE intracellular N domain 36 137 5.5E-26 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF158791 12 136 1.18E-29 T 14-10-2018 VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00116 146 199 73.0 T 14-10-2018 IPR000644 CBS domain VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 SMART SM00116 212 258 0.029 T 14-10-2018 IPR000644 CBS domain VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 SUPERFAMILY SSF161093 280 450 2.48E-43 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 Pfam PF01769 Divalent cation transporter 323 444 1.1E-22 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VV1_0698 da4af75c0d4f5a2533f6810c14479924 451 Gene3D G3DSA:1.25.60.10 8 134 5.3E-20 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily VV1_1786 dadae26acf2d0214b0f2878708658f32 255 Gene3D G3DSA:3.30.750.70 69 135 4.9E-8 T 14-10-2018 VV1_1786 dadae26acf2d0214b0f2878708658f32 255 Pfam PF00455 DeoR C terminal sensor domain 74 232 7.3E-54 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VV1_1786 dadae26acf2d0214b0f2878708658f32 255 SUPERFAMILY SSF46785 5 75 6.65E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1786 dadae26acf2d0214b0f2878708658f32 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.2E-24 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_1786 dadae26acf2d0214b0f2878708658f32 255 SMART SM01134 72 234 4.0E-71 T 14-10-2018 VV1_1786 dadae26acf2d0214b0f2878708658f32 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV1_1786 dadae26acf2d0214b0f2878708658f32 255 Gene3D G3DSA:1.10.10.10 1 68 8.0E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1786 dadae26acf2d0214b0f2878708658f32 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_1786 dadae26acf2d0214b0f2878708658f32 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_1786 dadae26acf2d0214b0f2878708658f32 255 SMART SM00420 6 58 4.1E-27 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_1786 dadae26acf2d0214b0f2878708658f32 255 SUPERFAMILY SSF100950 74 234 3.84E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:2.120.10.90 497 734 1.5E-14 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 2.1E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 637 0.0075 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 SUPERFAMILY SSF56719 33 485 5.75E-154 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 469 1.0E-135 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 SUPERFAMILY SSF101904 499 743 4.45E-51 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:3.30.1360.40 240 333 1.7E-178 T 14-10-2018 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:1.10.268.10 371 456 1.7E-178 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.661 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 Gene3D G3DSA:3.90.199.10 34 483 1.7E-178 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 SMART SM00434 13 463 1.1E-227 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0605 f94f54cc5e05434df5dd4f65d6c62330 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 14-10-2018 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Pfam PF00072 Response regulator receiver domain 519 628 4.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 331 9.6E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SMART SM00086 202 245 0.003 T 14-10-2018 IPR001610 PAC motif VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Gene3D G3DSA:3.30.565.10 331 496 7.9E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SMART SM00388 265 331 4.5E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Gene3D G3DSA:3.40.50.12740 515 711 1.7E-36 T 14-10-2018 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SMART SM00448 517 630 8.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Pfam PF08447 PAS fold 166 239 4.9E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SUPERFAMILY SSF52172 517 650 7.68E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 3.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 3.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 3.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 3.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SUPERFAMILY SSF47384 248 331 6.28E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 173 252 7.5E-7 T 14-10-2018 IPR000014 PAS domain VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Gene3D G3DSA:3.30.450.20 110 239 5.4E-23 T 14-10-2018 VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SUPERFAMILY SSF55785 125 247 8.9E-15 T 14-10-2018 IPR035965 PAS domain superfamily VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SMART SM00387 378 492 1.2E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 491 3.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 SUPERFAMILY SSF55874 320 488 3.01E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_3128 91af30bfedba4df21ec65a8bc36f6da0 718 Gene3D G3DSA:1.10.287.130 240 329 1.2E-29 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:1.10.132.30 641 790 3.4E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 1151 1214 5.2E-64 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 1022 1126 1.2E-29 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 3.5E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 5.1E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 SUPERFAMILY SSF64484 16 1362 0.0 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.2E-28 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 SMART SM00663 235 514 1.1E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 5.2E-64 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:1.10.274.100 490 640 3.9E-39 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Gene3D G3DSA:2.40.50.100 948 1021 5.0E-24 T 14-10-2018 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.988 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 5.9E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1212 db0f23d854db8ad77d704d80793993d2 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.0E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_2979 854b4319ba2245be50916f078978f392 88 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 86 19.208 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VV1_2979 854b4319ba2245be50916f078978f392 88 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 85 3.5E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VV1_1027 a22768ec3f4a58b3782bf29533130120 306 SUPERFAMILY SSF53850 89 290 5.25E-26 T 14-10-2018 VV1_1027 a22768ec3f4a58b3782bf29533130120 306 SUPERFAMILY SSF46785 6 87 1.2E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1027 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:3.40.190.290 93 278 5.2E-12 T 14-10-2018 VV1_1027 a22768ec3f4a58b3782bf29533130120 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1027 a22768ec3f4a58b3782bf29533130120 306 Pfam PF03466 LysR substrate binding domain 88 289 3.0E-23 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1027 a22768ec3f4a58b3782bf29533130120 306 Gene3D G3DSA:1.10.10.10 3 90 1.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0727 f80e07210bb9d09b808f0dab137fd596 291 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 37 270 4.3E-94 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV1_0727 f80e07210bb9d09b808f0dab137fd596 291 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 117 150 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV1_0727 f80e07210bb9d09b808f0dab137fd596 291 SUPERFAMILY SSF53790 33 278 6.15E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VV1_0727 f80e07210bb9d09b808f0dab137fd596 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV1_0727 f80e07210bb9d09b808f0dab137fd596 291 Gene3D G3DSA:3.40.1010.10 35 152 5.1E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VV1_0727 f80e07210bb9d09b808f0dab137fd596 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 249 7.2E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VV1_0727 f80e07210bb9d09b808f0dab137fd596 291 Gene3D G3DSA:3.30.950.10 153 291 3.7E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VV2_0154 4edaa696fd573d319f3906814d2c69cb 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.6E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VV2_0154 4edaa696fd573d319f3906814d2c69cb 327 Gene3D G3DSA:1.10.8.300 208 324 4.8E-35 T 14-10-2018 VV2_0154 4edaa696fd573d319f3906814d2c69cb 327 SUPERFAMILY SSF52540 9 301 5.82E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0154 4edaa696fd573d319f3906814d2c69cb 327 PIRSF PIRSF002849 1 327 2.5E-126 T 14-10-2018 VV2_0154 4edaa696fd573d319f3906814d2c69cb 327 Gene3D G3DSA:3.40.50.300 1 204 5.8E-51 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Gene3D G3DSA:3.30.559.10 486 658 1.4E-23 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Gene3D G3DSA:3.30.559.10 34 216 3.3E-39 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Pfam PF00668 Condensation domain 518 900 6.2E-14 T 14-10-2018 IPR001242 Condensation domain VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Pfam PF00668 Condensation domain 39 473 1.6E-31 T 14-10-2018 IPR001242 Condensation domain VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 SUPERFAMILY SSF52777 490 682 9.56E-11 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 SUPERFAMILY SSF52777 39 215 5.23E-20 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Pfam PF00501 AMP-binding enzyme 943 1332 3.6E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Gene3D G3DSA:3.30.559.30 668 908 3.2E-33 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Gene3D G3DSA:3.30.559.30 221 481 1.3E-59 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 957 1356 1.2E-107 T 14-10-2018 IPR010071 Amino acid adenylation domain VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 SUPERFAMILY SSF52777 670 904 2.0E-22 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1075 1086 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Gene3D G3DSA:3.40.50.12780 931 1325 1.6E-97 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 SUPERFAMILY SSF56801 931 1426 3.14E-122 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 SUPERFAMILY SSF52777 222 476 1.11E-34 T 14-10-2018 VV2_0831 97dc4a22d04756aadea14fe7ed12304e 1520 Gene3D G3DSA:3.30.300.30 1327 1432 2.4E-23 T 14-10-2018 VV2_1225 56fa20a701c5e49c1da27c6e5a17a8c7 591 SMART SM00267 423 591 3.1E-29 T 14-10-2018 IPR000160 GGDEF domain VV2_1225 56fa20a701c5e49c1da27c6e5a17a8c7 591 Gene3D G3DSA:3.30.450.20 144 270 2.3E-9 T 14-10-2018 VV2_1225 56fa20a701c5e49c1da27c6e5a17a8c7 591 Pfam PF17201 Cache 3/Cache 2 fusion domain 174 269 7.3E-7 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain VV2_1225 56fa20a701c5e49c1da27c6e5a17a8c7 591 Gene3D G3DSA:3.30.70.270 432 591 2.5E-36 T 14-10-2018 VV2_1225 56fa20a701c5e49c1da27c6e5a17a8c7 591 SUPERFAMILY SSF55073 441 591 4.87E-31 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1225 56fa20a701c5e49c1da27c6e5a17a8c7 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 435 590 1.2E-26 T 14-10-2018 IPR000160 GGDEF domain VV2_1225 56fa20a701c5e49c1da27c6e5a17a8c7 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 587 2.2E-26 T 14-10-2018 IPR000160 GGDEF domain VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.1E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 5 256 3.99E-92 T 14-10-2018 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 9.1E-227 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.8E-85 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 SUPERFAMILY SSF53067 255 497 6.29E-85 T 14-10-2018 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 PIRSF PIRSF000538 4 502 6.0E-175 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 255 500 6.6E-93 T 14-10-2018 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 Gene3D G3DSA:3.30.420.40 2 254 3.8E-111 T 14-10-2018 VV1_1787 9c0b01d35eddd095aaa003f6766b3ffc 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 57.985 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VV1_2389 a00c18a286ddb4922edd9055aa242430 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 5 506 44.432 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2389 a00c18a286ddb4922edd9055aa242430 513 Pfam PF00221 Aromatic amino acid lyase 13 473 1.1E-187 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VV1_2389 a00c18a286ddb4922edd9055aa242430 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 7 505 6.5E-216 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2389 a00c18a286ddb4922edd9055aa242430 513 SUPERFAMILY SSF48557 6 508 2.12E-192 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VV1_2389 a00c18a286ddb4922edd9055aa242430 513 Gene3D G3DSA:1.20.200.10 200 511 3.9E-123 T 14-10-2018 VV1_2389 a00c18a286ddb4922edd9055aa242430 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 141 157 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VV1_2389 a00c18a286ddb4922edd9055aa242430 513 Gene3D G3DSA:1.10.275.10 4 199 4.5E-71 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 3.2E-199 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 Gene3D G3DSA:3.40.50.720 144 250 1.6E-14 T 14-10-2018 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 Gene3D G3DSA:3.50.50.60 251 406 1.1E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 SUPERFAMILY SSF46548 2 155 4.18E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.1E-23 T 14-10-2018 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.1E-23 T 14-10-2018 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.1E-23 T 14-10-2018 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.1E-23 T 14-10-2018 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 459 6.6E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 Gene3D G3DSA:1.10.1060.10 9 143 2.9E-24 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 SUPERFAMILY SSF51971 143 407 2.53E-66 T 14-10-2018 VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 Gene3D G3DSA:3.50.50.60 411 476 4.0E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0554 ed1e35115cb3ed159a60dd99d67c6404 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.7E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.3E-127 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 Pfam PF07687 Peptidase dimerisation domain 174 285 2.0E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VV1_1370 51dda64549230bf97bd79da01bfd6403 378 Gene3D G3DSA:3.30.70.360 177 292 7.1E-80 T 14-10-2018 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 9.6E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 SUPERFAMILY SSF53187 3 377 5.14E-55 T 14-10-2018 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 Gene3D G3DSA:3.40.630.10 28 360 7.1E-80 T 14-10-2018 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 64.107 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VV1_1370 51dda64549230bf97bd79da01bfd6403 378 SUPERFAMILY SSF55031 177 291 1.64E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 Gene3D G3DSA:3.40.47.10 127 398 1.5E-133 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 SUPERFAMILY SSF53901 269 401 1.38E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 Pfam PF02803 Thiolase, C-terminal domain 269 401 1.9E-34 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 PIRSF PIRSF000429 1 403 4.6E-108 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 SUPERFAMILY SSF53901 5 268 9.61E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 2.2E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 Pfam PF00108 Thiolase, N-terminal domain 6 259 3.8E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VV2_0494 c5cfb6ba167f5d34db82c2cc75cfcfd2 405 Gene3D G3DSA:3.40.47.10 7 274 1.5E-133 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 Gene3D G3DSA:1.20.140.10 301 446 1.3E-90 T 14-10-2018 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 1.1E-109 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 SUPERFAMILY SSF56645 65 296 1.1E-45 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 Gene3D G3DSA:1.10.540.10 64 176 1.3E-90 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 SUPERFAMILY SSF47203 301 453 3.54E-21 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 Gene3D G3DSA:2.40.110.10 177 300 1.3E-90 T 14-10-2018 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 173 5.9E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.0E-9 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV1_2831 fba27e5da30419f70546cdfdfe92586e 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.6E-9 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 SUPERFAMILY SSF53955 88 349 4.5E-52 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 SUPERFAMILY SSF51055 434 475 1.02E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 SMART SM00495 515 560 3.0 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 SMART SM00495 433 475 4.9E-16 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 Gene3D G3DSA:1.10.530.10 104 345 1.5E-76 T 14-10-2018 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 Pfam PF02839 Carbohydrate binding domain 450 472 4.8E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 Gene3D G3DSA:3.30.20.10 177 247 1.5E-76 T 14-10-2018 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 Gene3D G3DSA:2.10.10.20 433 475 2.8E-16 T 14-10-2018 VV1_0417 79ec20fecdb4a1b38cd19b7828faf672 563 Pfam PF00182 Chitinase class I 105 325 2.0E-30 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VV1_2468 856bc9ef4aed88db122757a8ec68cafb 198 SUPERFAMILY SSF53335 23 196 2.09E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2468 856bc9ef4aed88db122757a8ec68cafb 198 Gene3D G3DSA:3.40.50.150 26 182 9.4E-20 T 14-10-2018 VV1_2468 856bc9ef4aed88db122757a8ec68cafb 198 Pfam PF08241 Methyltransferase domain 39 132 1.1E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VV2_0143 c6f8732dda83f23e399362dd5f3d72a0 275 Pfam PF12849 PBP superfamily domain 22 253 1.5E-35 T 14-10-2018 IPR024370 PBP domain VV2_0143 c6f8732dda83f23e399362dd5f3d72a0 275 Gene3D G3DSA:3.40.190.10 97 231 1.6E-78 T 14-10-2018 VV2_0143 c6f8732dda83f23e399362dd5f3d72a0 275 Gene3D G3DSA:3.40.190.10 26 267 1.6E-78 T 14-10-2018 VV2_0143 c6f8732dda83f23e399362dd5f3d72a0 275 SUPERFAMILY SSF53850 24 271 8.95E-64 T 14-10-2018 VV2_0143 c6f8732dda83f23e399362dd5f3d72a0 275 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 21 268 4.6E-65 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 SUPERFAMILY SSF82693 46 137 2.14E-18 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:3.30.70.1440 659 856 8.9E-257 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 SUPERFAMILY SSF82714 719 793 2.75E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:3.30.70.1430 559 658 8.9E-257 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 SUPERFAMILY SSF82714 185 266 6.15E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:3.30.2090.10 708 795 8.9E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 SUPERFAMILY SSF82866 293 488 9.81E-36 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:3.30.70.1320 139 327 8.9E-257 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:3.30.70.1430 46 803 8.9E-257 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 SUPERFAMILY SSF82693 146 325 1.36E-8 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 SUPERFAMILY SSF82866 791 1019 1.44E-50 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:1.20.1640.10 502 1013 8.9E-257 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.6E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:1.20.1640.10 16 501 8.9E-257 T 14-10-2018 VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Gene3D G3DSA:3.30.2090.10 180 270 8.9E-257 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0928 7b9552e9f7dcc3d997a5803cd485c513 1045 Pfam PF00873 AcrB/AcrD/AcrF family 10 1016 1.1E-161 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2257 d886337a60da54904390509ae61595a8 121 PIRSF PIRSF006113 1 121 1.8E-53 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VV1_2257 d886337a60da54904390509ae61595a8 121 Gene3D G3DSA:3.30.479.10 1 121 8.6E-50 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VV1_2257 d886337a60da54904390509ae61595a8 121 SUPERFAMILY SSF55620 2 119 4.23E-41 T 14-10-2018 VV1_2257 d886337a60da54904390509ae61595a8 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 97 9.3E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VV1_2257 d886337a60da54904390509ae61595a8 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 121 2.2E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VV1_2935 372913ce6f93b60c7c0bdc09b88b3fea 241 SUPERFAMILY SSF51735 4 235 4.56E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2935 372913ce6f93b60c7c0bdc09b88b3fea 241 Gene3D G3DSA:3.40.50.720 3 215 3.4E-46 T 14-10-2018 VV1_2935 372913ce6f93b60c7c0bdc09b88b3fea 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV1_2935 372913ce6f93b60c7c0bdc09b88b3fea 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2935 372913ce6f93b60c7c0bdc09b88b3fea 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2935 372913ce6f93b60c7c0bdc09b88b3fea 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2935 372913ce6f93b60c7c0bdc09b88b3fea 241 Pfam PF00106 short chain dehydrogenase 3 182 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 SUPERFAMILY SSF56059 492 698 2.05E-30 T 14-10-2018 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Gene3D G3DSA:3.40.50.261 293 463 6.9E-52 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Gene3D G3DSA:3.40.630.30 727 892 8.1E-41 T 14-10-2018 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 SUPERFAMILY SSF52210 295 455 3.53E-40 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Pfam PF00583 Acetyltransferase (GNAT) family 771 873 3.8E-10 T 14-10-2018 IPR000182 GNAT domain VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 SUPERFAMILY SSF55729 732 876 6.69E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Pfam PF13380 CoA binding domain 12 136 1.3E-22 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 SMART SM00881 7 102 2.1E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Pfam PF13549 ATP-grasp domain 487 704 4.3E-66 T 14-10-2018 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Gene3D G3DSA:3.30.470.20 491 700 2.8E-55 T 14-10-2018 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Gene3D G3DSA:3.30.1490.20 509 586 2.8E-55 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 288 2.3E-44 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 SUPERFAMILY SSF51735 3 141 5.91E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Gene3D G3DSA:3.40.50.720 1 131 3.9E-33 T 14-10-2018 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 SUPERFAMILY SSF52210 131 290 3.4E-35 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV2_0278 d77c72a7d90a5bde273fe724c53be982 892 Gene3D G3DSA:3.40.50.261 132 291 6.8E-46 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 Gene3D G3DSA:3.30.450.20 37 183 3.1E-44 T 14-10-2018 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 SUPERFAMILY SSF58104 229 538 9.55E-68 T 14-10-2018 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 SMART SM00304 209 261 1.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 SMART SM00283 276 537 1.6E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 501 2.3E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 Gene3D G3DSA:1.10.287.950 208 538 2.2E-67 T 14-10-2018 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 Pfam PF17200 Single Cache domain 2 41 183 1.6E-39 T 14-10-2018 IPR033480 Single Cache domain 2 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 SMART SM01049 35 127 7.6E-32 T 14-10-2018 IPR033480 Single Cache domain 2 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 Pfam PF00672 HAMP domain 211 257 2.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 1.7E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0356 f83839f4fde0657d0f8499838b072c26 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 1.7E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SMART SM00271 220 285 5.1E-20 T 14-10-2018 IPR001623 DnaJ domain VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 265 285 6.0E-11 T 14-10-2018 IPR001623 DnaJ domain VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 223 241 6.0E-11 T 14-10-2018 IPR001623 DnaJ domain VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 PRINTS PR00625 DnaJ domain signature 241 256 6.0E-11 T 14-10-2018 IPR001623 DnaJ domain VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF46565 138 283 4.81E-32 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF00226 DnaJ domain 221 283 5.1E-13 T 14-10-2018 IPR001623 DnaJ domain VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.3680.10 40 192 1.5E-26 T 14-10-2018 IPR029024 TerB-like VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Gene3D G3DSA:1.10.287.110 195 285 8.4E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 SUPERFAMILY SSF158682 48 181 1.75E-23 T 14-10-2018 IPR029024 TerB-like VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Pfam PF05099 Tellurite resistance protein TerB 46 177 3.5E-18 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VV1_0659 3cf7bfe01bcad443e9f603a1b0d63ac3 287 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 286 40.25 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 VV1_0664 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.663 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG VV1_0664 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Gene3D G3DSA:2.60.40.1470 1 126 2.0E-46 T 14-10-2018 IPR036767 ApaG domain superfamily VV1_0664 f990a008ad4ab5b8419a4dd60d7c3ac3 126 SUPERFAMILY SSF110069 6 126 1.44E-46 T 14-10-2018 IPR036767 ApaG domain superfamily VV1_0664 f990a008ad4ab5b8419a4dd60d7c3ac3 126 Pfam PF04379 ApaG domain 18 103 1.1E-32 T 14-10-2018 IPR007474 ApaG domain VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.717 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.30.63.10 37 96 6.6E-74 T 14-10-2018 VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.2E-76 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 Pfam PF00625 Guanylate kinase 5 185 7.0E-61 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 SUPERFAMILY SSF52540 3 189 2.65E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 SMART SM00072 3 187 2.2E-73 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VV1_0850 48d5baf2e630c0eb8f97f6577c7a5733 207 Gene3D G3DSA:3.40.50.300 8 183 6.6E-74 T 14-10-2018 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Gene3D G3DSA:3.30.65.10 749 811 2.6E-30 T 14-10-2018 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Gene3D G3DSA:3.30.65.10 701 748 2.7E-6 T 14-10-2018 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 1.1E-246 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Gene3D G3DSA:2.20.25.10 812 869 2.2E-26 T 14-10-2018 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Pfam PF01751 Toprim domain 5 148 5.0E-32 T 14-10-2018 IPR006171 TOPRIM domain VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Gene3D G3DSA:1.10.460.10 171 576 1.4E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 749 4.4E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 1.0E-4 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 SUPERFAMILY SSF57783 748 811 2.72E-18 T 14-10-2018 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 SMART SM00436 139 227 1.3E-47 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Gene3D G3DSA:2.70.20.10 219 478 1.4E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Pfam PF01131 DNA topoisomerase 163 569 5.2E-128 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 SMART SM00437 278 532 2.9E-119 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 1.1E-17 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 8.9E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Gene3D G3DSA:3.40.50.140 1 169 5.4E-66 T 14-10-2018 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 SMART SM00493 3 138 9.0E-37 T 14-10-2018 IPR006171 TOPRIM domain VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Gene3D G3DSA:1.10.290.10 286 410 1.4E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 SUPERFAMILY SSF56712 3 614 6.67E-198 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 736 53.952 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 SUPERFAMILY SSF57783 813 869 2.04E-20 T 14-10-2018 VV1_2130 43708ff9f067b9983dd4aedf157944f1 874 SUPERFAMILY SSF57783 704 746 2.21E-5 T 14-10-2018 VV2_1652 dffe6843d8da6cf436e8ec5d59c104d4 228 Pfam PF08279 HTH domain 6 59 6.3E-17 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 VV2_1652 dffe6843d8da6cf436e8ec5d59c104d4 228 Gene3D G3DSA:1.10.10.10 1 64 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1652 dffe6843d8da6cf436e8ec5d59c104d4 228 Pfam PF13280 WYL domain 140 224 2.0E-18 T 14-10-2018 IPR026881 WYL domain VV2_1652 dffe6843d8da6cf436e8ec5d59c104d4 228 SUPERFAMILY SSF46785 1 61 2.18E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_3063 b0e615895e8eb84d75843a30133c53c7 293 Gene3D G3DSA:3.20.20.140 3 250 1.4E-83 T 14-10-2018 VV1_3063 b0e615895e8eb84d75843a30133c53c7 293 SUPERFAMILY SSF89550 1 275 5.49E-55 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VV1_3063 b0e615895e8eb84d75843a30133c53c7 293 Pfam PF02811 PHP domain 4 163 1.7E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 VV1_3063 b0e615895e8eb84d75843a30133c53c7 293 Gene3D G3DSA:1.10.150.650 98 169 1.4E-83 T 14-10-2018 VV1_3063 b0e615895e8eb84d75843a30133c53c7 293 SMART SM00481 3 70 7.8E-17 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VV1_2415 0fab8628ba2e08cf9074228ffe219964 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 1.0E-15 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VV1_2415 0fab8628ba2e08cf9074228ffe219964 141 SUPERFAMILY SSF53927 2 137 1.66E-37 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV1_2415 0fab8628ba2e08cf9074228ffe219964 141 Gene3D G3DSA:3.40.140.10 1 140 1.1E-36 T 14-10-2018 VV1_2415 0fab8628ba2e08cf9074228ffe219964 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV1_2514 7a142345662b8079f6919d0adaf3176a 185 SUPERFAMILY SSF55729 2 175 4.01E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2514 7a142345662b8079f6919d0adaf3176a 185 Pfam PF13302 Acetyltransferase (GNAT) domain 7 149 7.5E-35 T 14-10-2018 IPR000182 GNAT domain VV1_2514 7a142345662b8079f6919d0adaf3176a 185 Gene3D G3DSA:3.40.630.30 2 162 9.2E-45 T 14-10-2018 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 Gene3D G3DSA:3.40.140.10 4 140 1.4E-45 T 14-10-2018 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 360 6.2E-56 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 8.3E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VV1_0323 187e7ee771a9c3287828d71009943bbd 368 SUPERFAMILY SSF53597 149 361 2.68E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 PIRSF PIRSF006769 3 366 1.9E-119 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 Gene3D G3DSA:3.40.430.10 142 367 6.0E-63 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 6.8E-127 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 Pfam PF01872 RibD C-terminal domain 152 357 1.8E-46 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VV1_0323 187e7ee771a9c3287828d71009943bbd 368 SUPERFAMILY SSF53927 8 148 4.85E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV1_1468 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Gene3D G3DSA:3.30.70.970 1 132 2.4E-58 T 14-10-2018 IPR036701 RraB-like superfamily VV1_1468 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 SUPERFAMILY SSF89946 8 126 4.97E-39 T 14-10-2018 IPR036701 RraB-like superfamily VV1_1468 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.753 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VV1_1468 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.2E-34 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain VV1_1468 4ac3cd9c97d2028e0d2b0e60b85f08a4 140 PIRSF PIRSF018193 8 140 4.2E-59 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 Gene3D G3DSA:2.30.38.10 362 437 1.1E-25 T 14-10-2018 VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 Gene3D G3DSA:3.40.50.980 188 361 2.8E-54 T 14-10-2018 VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 Gene3D G3DSA:3.40.50.980 25 180 8.4E-39 T 14-10-2018 VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 SUPERFAMILY SSF56801 10 540 6.67E-134 T 14-10-2018 VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 Pfam PF00501 AMP-binding enzyme 39 443 1.1E-76 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 Gene3D G3DSA:3.30.300.310 439 542 1.8E-29 T 14-10-2018 VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 7 535 3.8E-243 T 14-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 VV2_0836 c53edc8ef9a7f856f37da30f8095b50b 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 528 3.4E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 Gene3D G3DSA:3.30.70.250 125 197 1.2E-106 T 14-10-2018 VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 2.2E-40 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 SUPERFAMILY SSF52151 4 305 1.99E-81 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 SUPERFAMILY SSF55048 128 197 1.31E-18 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 Gene3D G3DSA:3.40.366.10 7 286 1.2E-106 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 Pfam PF00698 Acyl transferase domain 7 297 4.2E-36 T 14-10-2018 IPR014043 Acyl transferase VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 PIRSF PIRSF000446 1 307 5.4E-138 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VV1_3010 42fb1e9cdaa7f06f118c55cf0b7b254c 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 6.4E-128 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VV2_1206 36e30af230b10005432d6dd76a89774c 299 SUPERFAMILY SSF53850 90 277 5.07E-14 T 14-10-2018 VV2_1206 36e30af230b10005432d6dd76a89774c 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1206 36e30af230b10005432d6dd76a89774c 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1206 36e30af230b10005432d6dd76a89774c 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1206 36e30af230b10005432d6dd76a89774c 299 Pfam PF03466 LysR substrate binding domain 92 276 1.5E-8 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1206 36e30af230b10005432d6dd76a89774c 299 SUPERFAMILY SSF46785 1 82 5.99E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1206 36e30af230b10005432d6dd76a89774c 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1206 36e30af230b10005432d6dd76a89774c 299 Gene3D G3DSA:1.10.10.10 1 84 9.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_3129 c748a44d43d56e0c2f5fcc7bd5709f59 312 Pfam PF00850 Histone deacetylase domain 44 289 1.4E-46 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VV1_3129 c748a44d43d56e0c2f5fcc7bd5709f59 312 PRINTS PR01270 Histone deacetylase superfamily signature 158 173 4.7E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VV1_3129 c748a44d43d56e0c2f5fcc7bd5709f59 312 PRINTS PR01270 Histone deacetylase superfamily signature 232 242 4.7E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VV1_3129 c748a44d43d56e0c2f5fcc7bd5709f59 312 PRINTS PR01270 Histone deacetylase superfamily signature 124 147 4.7E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VV1_3129 c748a44d43d56e0c2f5fcc7bd5709f59 312 Gene3D G3DSA:3.40.800.20 2 304 1.3E-62 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VV1_3129 c748a44d43d56e0c2f5fcc7bd5709f59 312 SUPERFAMILY SSF52768 2 295 5.76E-80 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VV1_1695 786097aeef39b7a646656b9259673bfe 495 SMART SM00316 133 198 4.1E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.8E-8 T 14-10-2018 VV1_1695 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF54814 279 343 3.66E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VV1_1695 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF47794 356 415 8.16E-17 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.300.20 278 345 7.2E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV1_1695 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.1480.10 1 129 9.3E-44 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VV1_1695 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 9.0E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VV1_1695 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VV1_1695 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF50249 132 199 1.2E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1695 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:1.10.150.20 352 421 9.8E-30 T 14-10-2018 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.603 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VV1_1695 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF54814 201 278 1.24E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:2.40.50.140 135 198 4.4E-17 T 14-10-2018 VV1_1695 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF47794 429 492 3.61E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV1_1695 786097aeef39b7a646656b9259673bfe 495 SUPERFAMILY SSF69705 1 126 2.35E-39 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Pfam PF08529 NusA N-terminal domain 4 123 7.8E-35 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Pfam PF13184 NusA-like KH domain 230 297 4.9E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VV1_1695 786097aeef39b7a646656b9259673bfe 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.9E-123 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 VV1_1695 786097aeef39b7a646656b9259673bfe 495 Gene3D G3DSA:1.10.150.20 431 490 2.8E-24 T 14-10-2018 VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 328 7.1E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 Gene3D G3DSA:3.40.50.720 3 318 2.4E-132 T 14-10-2018 VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 SUPERFAMILY SSF51735 103 299 1.17E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 Gene3D G3DSA:3.40.50.720 103 298 2.4E-132 T 14-10-2018 VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 SUPERFAMILY SSF52283 1 136 2.27E-41 T 14-10-2018 VV1_2200 1583a67fa4b37a22d7680b9a3e16ca12 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 6.3E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Gene3D G3DSA:3.30.450.20 157 277 1.1E-15 T 14-10-2018 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Gene3D G3DSA:3.30.565.10 363 528 4.7E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Gene3D G3DSA:1.20.120.160 864 973 3.7E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SUPERFAMILY SSF47384 284 365 1.31E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 286 3.1E-14 T 14-10-2018 IPR000014 PAS domain VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SUPERFAMILY SSF55874 353 522 8.64E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SUPERFAMILY SSF52172 543 673 3.84E-29 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 364 1.7E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SUPERFAMILY SSF55785 175 286 3.14E-13 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SUPERFAMILY SSF47226 796 965 2.09E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 523 4.7E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Gene3D G3DSA:3.40.50.2300 530 667 4.0E-32 T 14-10-2018 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SMART SM00448 545 664 7.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SMART SM00448 695 813 2.5E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Pfam PF00989 PAS fold 165 221 5.8E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 2.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Pfam PF00072 Response regulator receiver domain 547 661 4.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Pfam PF00072 Response regulator receiver domain 697 813 1.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Pfam PF01627 Hpt domain 901 964 6.2E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SUPERFAMILY SSF52172 691 818 4.98E-38 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Gene3D G3DSA:1.10.287.130 278 362 1.2E-28 T 14-10-2018 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SMART SM00091 162 228 1.5E-4 T 14-10-2018 IPR000014 PAS domain VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 Gene3D G3DSA:3.40.50.2300 695 848 6.7E-42 T 14-10-2018 VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SMART SM00387 411 527 7.6E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0077 496293c3185a6d5ab0cc46d4b6d871d6 1072 SMART SM00388 299 364 2.8E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0808 dac53f1fd239f6d846a9d5216d0709ef 333 Gene3D G3DSA:3.90.1210.10 287 333 3.2E-11 T 14-10-2018 VV1_0808 dac53f1fd239f6d846a9d5216d0709ef 333 SUPERFAMILY SSF51269 273 333 2.83E-16 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 VV1_0808 dac53f1fd239f6d846a9d5216d0709ef 333 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 5 333 1.0E-148 T 14-10-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|MetaCyc: PWY-6749|MetaCyc: PWY-7131 VV1_0808 dac53f1fd239f6d846a9d5216d0709ef 333 Gene3D G3DSA:3.20.20.70 1 286 3.3E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0808 dac53f1fd239f6d846a9d5216d0709ef 333 Pfam PF08666 SAF domain 283 333 1.5E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VV1_0808 dac53f1fd239f6d846a9d5216d0709ef 333 Pfam PF03102 NeuB family 25 265 5.7E-95 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 VV1_0808 dac53f1fd239f6d846a9d5216d0709ef 333 SUPERFAMILY SSF51569 3 289 4.12E-87 T 14-10-2018 VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.6E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 Gene3D G3DSA:3.30.1340.10 1 85 2.6E-32 T 14-10-2018 IPR035895 HPr-like superfamily VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 SUPERFAMILY SSF55594 1 82 1.57E-26 T 14-10-2018 IPR035895 HPr-like superfamily VV1_0210 d81f0ba3296863963e37c68e6253d0f6 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.5E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 SUPERFAMILY SSF46955 1 126 1.28E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 SMART SM00422 1 70 6.4E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 Pfam PF00376 MerR family regulatory protein 2 39 1.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 4.6E-58 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 Gene3D G3DSA:1.10.1660.10 1 125 2.0E-31 T 14-10-2018 VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 Pfam PF09278 MerR, DNA binding 46 107 2.9E-16 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.4E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.4E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0113 95e9e827ef8fae3c5983c2dcb7553a8a 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.4E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.555 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 436 565 9.4E-5 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Gene3D G3DSA:3.90.480.20 21 423 1.1E-82 T 14-10-2018 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 SUPERFAMILY SSF56014 435 567 1.06E-32 T 14-10-2018 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Gene3D G3DSA:3.30.413.10 432 575 4.1E-34 T 14-10-2018 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 9.9E-46 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 SUPERFAMILY SSF55124 352 428 1.8E-21 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 3.6E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 3.6E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.7E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 2.6E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 SUPERFAMILY SSF55124 17 150 1.08E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 Gene3D G3DSA:3.30.413.10 146 354 1.1E-82 T 14-10-2018 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 1.1E-285 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VV1_1403 f7ef8325cb8a14566aa7b4c3620aa37f 578 SUPERFAMILY SSF56014 154 350 6.02E-57 T 14-10-2018 VV2_1343 7528468f925612df64982a647ec9f46b 494 PIRSF PIRSF005243 1 426 2.8E-175 T 14-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 VV2_1343 7528468f925612df64982a647ec9f46b 494 Gene3D G3DSA:3.40.50.360 253 395 7.4E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV2_1343 7528468f925612df64982a647ec9f46b 494 SUPERFAMILY SSF57802 441 492 2.69E-16 T 14-10-2018 VV2_1343 7528468f925612df64982a647ec9f46b 494 Pfam PF00301 Rubredoxin 444 489 3.9E-17 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VV2_1343 7528468f925612df64982a647ec9f46b 494 SMART SM00849 34 227 6.3E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_1343 7528468f925612df64982a647ec9f46b 494 SUPERFAMILY SSF52218 251 396 3.35E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV2_1343 7528468f925612df64982a647ec9f46b 494 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 4.3E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_1343 7528468f925612df64982a647ec9f46b 494 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 493 75.187 T 14-10-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 VV2_1343 7528468f925612df64982a647ec9f46b 494 Gene3D G3DSA:2.20.28.10 442 494 3.2E-20 T 14-10-2018 VV2_1343 7528468f925612df64982a647ec9f46b 494 Gene3D G3DSA:3.60.15.10 1 247 1.0E-105 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1343 7528468f925612df64982a647ec9f46b 494 PRINTS PR00163 Rubredoxin signature 473 489 1.3E-5 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VV2_1343 7528468f925612df64982a647ec9f46b 494 PRINTS PR00163 Rubredoxin signature 443 459 1.3E-5 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 VV2_1343 7528468f925612df64982a647ec9f46b 494 Pfam PF00258 Flavodoxin 256 388 3.7E-11 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV2_1343 7528468f925612df64982a647ec9f46b 494 SUPERFAMILY SSF56281 8 283 4.47E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 Gene3D G3DSA:3.40.50.300 1 211 3.0E-71 T 14-10-2018 VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 SMART SM00487 22 224 1.3E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 Pfam PF00271 Helicase conserved C-terminal domain 234 341 4.8E-32 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 Gene3D G3DSA:3.40.50.300 216 408 5.2E-52 T 14-10-2018 VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 SMART SM00490 260 341 2.8E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 408 50.043 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 SUPERFAMILY SSF52540 76 358 2.02E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0534 a75272dea84f980ab3c1296d7b738dce 408 Pfam PF00270 DEAD/DEAH box helicase 27 195 8.7E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_0412 99ccc31b497fb25330b191589116b9dc 196 Gene3D G3DSA:1.20.1440.20 15 196 1.3E-61 T 14-10-2018 IPR023353 LemA-like domain superfamily VV2_0412 99ccc31b497fb25330b191589116b9dc 196 Pfam PF04011 LemA family 6 196 1.8E-65 T 14-10-2018 IPR007156 LemA VV2_0412 99ccc31b497fb25330b191589116b9dc 196 SUPERFAMILY SSF140478 25 181 3.66E-53 T 14-10-2018 IPR023353 LemA-like domain superfamily VV1_0518 0d65caba76dfa452a44901dd49f2dc2a 263 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 1.4E-50 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VV1_2198 d8f698be37447b289db914ba2aeae480 201 Gene3D G3DSA:3.40.50.1000 2 186 4.1E-42 T 14-10-2018 IPR023214 HAD superfamily VV1_2198 d8f698be37447b289db914ba2aeae480 201 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 175 5.9E-19 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_2198 d8f698be37447b289db914ba2aeae480 201 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 176 3.0E-29 T 14-10-2018 VV1_2198 d8f698be37447b289db914ba2aeae480 201 SUPERFAMILY SSF56784 1 199 2.52E-42 T 14-10-2018 IPR036412 HAD-like superfamily VV1_2198 d8f698be37447b289db914ba2aeae480 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 120 136 8.9E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_2198 d8f698be37447b289db914ba2aeae480 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 89 102 8.9E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_2198 d8f698be37447b289db914ba2aeae480 201 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 158 8.9E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_2198 d8f698be37447b289db914ba2aeae480 201 Gene3D G3DSA:1.10.150.240 7 76 4.1E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VV1_1207 7face2d07b57619ca140f782e48a4333 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_1207 7face2d07b57619ca140f782e48a4333 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.0E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1207 7face2d07b57619ca140f782e48a4333 142 SUPERFAMILY SSF54747 3 73 1.07E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VV1_1207 7face2d07b57619ca140f782e48a4333 142 SMART SM00649 9 141 2.1E-81 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VV1_1207 7face2d07b57619ca140f782e48a4333 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.1 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VV1_1207 7face2d07b57619ca140f782e48a4333 142 SUPERFAMILY SSF46906 68 141 1.03E-23 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VV1_1207 7face2d07b57619ca140f782e48a4333 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 6.0E-16 T 14-10-2018 VV1_1207 7face2d07b57619ca140f782e48a4333 142 Gene3D G3DSA:1.10.10.250 73 141 1.8E-24 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VV1_1207 7face2d07b57619ca140f782e48a4333 142 Gene3D G3DSA:3.30.1550.10 2 72 1.7E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VV1_1207 7face2d07b57619ca140f782e48a4333 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 9.8E-22 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VV1_1207 7face2d07b57619ca140f782e48a4333 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.6E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal VV2_0636 27061142927affca811fc84df7a1128c 122 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 57 111 3.5E-6 T 14-10-2018 IPR014118 Type IV conjugative transfer system protein TraV VV2_0636 27061142927affca811fc84df7a1128c 122 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 50 111 1.9E-17 T 14-10-2018 IPR014118 Type IV conjugative transfer system protein TraV VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 9 204 6.5E-183 T 14-10-2018 VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 5.6E-194 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 2.0E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 SUPERFAMILY SSF53686 5 387 8.51E-142 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 PIRSF PIRSF001413 1 396 5.0E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 Gene3D G3DSA:3.40.50.1100 53 383 6.5E-183 T 14-10-2018 VV1_3068 4d9c667fff3e8accf1297f5e7cfa44e9 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.65 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_3114 207bb7fcbfe82a972adbb5ac5bb50717 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 2.5E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_3114 207bb7fcbfe82a972adbb5ac5bb50717 179 Gene3D G3DSA:3.30.700.10 14 165 5.4E-13 T 14-10-2018 VV1_3114 207bb7fcbfe82a972adbb5ac5bb50717 179 SUPERFAMILY SSF54523 14 147 3.3E-13 T 14-10-2018 VV1_3114 207bb7fcbfe82a972adbb5ac5bb50717 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 2.9E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_3114 207bb7fcbfe82a972adbb5ac5bb50717 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_2230 1e9f9140e8207137d56e48c9362d37d2 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 19 135 1.7E-5 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VV1_2230 1e9f9140e8207137d56e48c9362d37d2 202 Pfam PF02810 SEC-C motif 184 202 2.0E-10 T 14-10-2018 IPR004027 SEC-C motif VV1_2230 1e9f9140e8207137d56e48c9362d37d2 202 SUPERFAMILY SSF103642 182 201 2.62E-7 T 14-10-2018 VV1_2230 1e9f9140e8207137d56e48c9362d37d2 202 Gene3D G3DSA:3.10.450.50 145 202 1.3E-9 T 14-10-2018 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Pfam PF09308 LuxQ, periplasmic 40 277 5.4E-102 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SMART SM00448 734 846 6.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 595 711 1.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Gene3D G3DSA:3.40.50.2300 722 855 9.3E-35 T 14-10-2018 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SUPERFAMILY SSF103190 51 269 2.9E-69 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SUPERFAMILY SSF55874 537 710 8.51E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Gene3D G3DSA:3.30.450.20 343 474 9.5E-7 T 14-10-2018 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Gene3D G3DSA:2.20.20.100 207 270 2.1E-6 T 14-10-2018 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SMART SM00388 483 548 1.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SMART SM00387 595 712 9.6E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Gene3D G3DSA:1.10.287.130 475 548 5.7E-21 T 14-10-2018 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SUPERFAMILY SSF55785 347 461 3.64E-6 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SUPERFAMILY SSF47384 471 549 6.28E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 651 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 665 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 690 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 709 2.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Pfam PF00072 Response regulator receiver domain 736 845 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 SUPERFAMILY SSF52172 732 853 1.85E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Gene3D G3DSA:3.30.565.10 549 715 3.3E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 12 360 0.0 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 484 548 2.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0752 9c339b10d7df7926fc504d58db9936ab 857 Gene3D G3DSA:3.30.450.220 50 206 8.3E-58 T 14-10-2018 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 Pfam PF02274 Amidinotransferase 18 403 2.3E-111 T 14-10-2018 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 Gene3D G3DSA:1.10.3930.10 68 148 1.1E-146 T 14-10-2018 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.034 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 PIRSF PIRSF006356 1 406 6.9E-159 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.2E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 SUPERFAMILY SSF55909 3 406 2.86E-129 T 14-10-2018 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 1.3E-171 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VV1_1467 808052d4dc11742f7ed6ddbca23bbd8e 406 Gene3D G3DSA:3.75.10.10 6 403 1.1E-146 T 14-10-2018 VV2_1239 2c5f0b9427f32896f6ed1ee0eb3b1e00 349 Pfam PF03193 RsgA GTPase 81 254 1.7E-48 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VV2_1239 2c5f0b9427f32896f6ed1ee0eb3b1e00 349 Gene3D G3DSA:1.10.40.50 257 327 3.4E-22 T 14-10-2018 VV2_1239 2c5f0b9427f32896f6ed1ee0eb3b1e00 349 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 65 311 7.9E-48 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VV2_1239 2c5f0b9427f32896f6ed1ee0eb3b1e00 349 SUPERFAMILY SSF52540 99 315 9.21E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1239 2c5f0b9427f32896f6ed1ee0eb3b1e00 349 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 31 318 31.898 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VV2_1239 2c5f0b9427f32896f6ed1ee0eb3b1e00 349 Gene3D G3DSA:3.40.50.300 83 254 5.6E-44 T 14-10-2018 VV1_2732 5f1c1b7b75740bb1132ecb94589aae6a 298 Gene3D G3DSA:3.20.20.60 2 298 1.0E-98 T 14-10-2018 VV1_2732 5f1c1b7b75740bb1132ecb94589aae6a 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VV1_2732 5f1c1b7b75740bb1132ecb94589aae6a 298 SUPERFAMILY SSF51621 5 294 2.11E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_2732 5f1c1b7b75740bb1132ecb94589aae6a 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.791 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VV1_2732 5f1c1b7b75740bb1132ecb94589aae6a 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 258 1.5E-45 T 14-10-2018 VV1_2732 5f1c1b7b75740bb1132ecb94589aae6a 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 2.6E-127 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 Gene3D G3DSA:3.30.1340.10 291 378 8.5E-27 T 14-10-2018 IPR035895 HPr-like superfamily VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 Pfam PF00381 PTS HPr component phosphorylation site 294 373 5.2E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 SUPERFAMILY SSF55594 294 379 2.75E-23 T 14-10-2018 IPR035895 HPr-like superfamily VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 SUPERFAMILY SSF55804 145 276 9.68E-16 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 302 309 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 Gene3D G3DSA:3.40.930.10 1 142 1.4E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 PRINTS PR00107 Phosphocarrier protein signature 302 318 5.5E-16 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 PRINTS PR00107 Phosphocarrier protein signature 330 345 5.5E-16 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 PRINTS PR00107 Phosphocarrier protein signature 345 362 5.5E-16 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 SUPERFAMILY SSF55804 4 141 2.49E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 2.8E-31 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_0200 6361b14a10f4e7c99d9100feb70e0c4f 380 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 294 373 1.9E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 SUPERFAMILY SSF55874 279 441 2.88E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 SUPERFAMILY SSF47384 207 289 8.63E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 289 1.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 441 7.8E-116 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 Gene3D G3DSA:1.10.287.130 174 291 2.6E-21 T 14-10-2018 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 442 7.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 SMART SM00388 224 290 3.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 SMART SM00304 170 223 4.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 Gene3D G3DSA:3.30.565.10 293 442 5.8E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0992 3f0177247b56ac95f53ae447a485f3c2 450 SMART SM00387 333 445 3.2E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 Pfam PF13533 Biotin-lipoyl like 79 108 1.9E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 9.4E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 9.4E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 9.4E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 9.4E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 9.4E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 9.4E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 9.4E-50 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 1.8E-131 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 SUPERFAMILY SSF56954 171 266 3.27E-5 T 14-10-2018 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 Pfam PF13437 HlyD family secretion protein 316 426 4.2E-18 T 14-10-2018 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 Gene3D G3DSA:1.20.1600.10 141 273 1.4E-5 T 14-10-2018 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 Gene3D G3DSA:2.40.50.100 71 140 2.9E-6 T 14-10-2018 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 SUPERFAMILY SSF111369 66 138 4.05E-6 T 14-10-2018 VV2_1125 1f96fcedbe213b0e78b40764bcce2a88 463 Gene3D G3DSA:2.40.30.170 325 446 1.2E-10 T 14-10-2018 VV1_1445 6e83b903cdcc5889aba58344b1632ca6 188 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1445 6e83b903cdcc5889aba58344b1632ca6 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.2E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1445 6e83b903cdcc5889aba58344b1632ca6 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.2E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 SUPERFAMILY SSF63380 1 93 1.7E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 SUPERFAMILY SSF63380 93 198 1.11E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 Gene3D G3DSA:2.40.30.20 94 191 7.6E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 PIRSF PIRSF000498 1 204 1.0E-67 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 1.5E-76 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 Gene3D G3DSA:2.40.30.20 1 89 5.1E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 Pfam PF00677 Lumazine binding domain 3 87 1.3E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_2560 23865f7f690c91deebd153b6a31a6a3e 206 Pfam PF00677 Lumazine binding domain 100 185 1.3E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_2842 06fc431e8347387bdec27c1759f4cb9f 424 Gene3D G3DSA:1.20.1720.10 41 419 4.5E-101 T 14-10-2018 VV1_2842 06fc431e8347387bdec27c1759f4cb9f 424 SUPERFAMILY SSF103473 37 422 8.24E-66 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_2842 06fc431e8347387bdec27c1759f4cb9f 424 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 41 418 3.1E-118 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VV1_2842 06fc431e8347387bdec27c1759f4cb9f 424 Pfam PF07690 Major Facilitator Superfamily 48 387 1.3E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Pfam PF00271 Helicase conserved C-terminal domain 806 909 4.7E-16 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SMART SM01058 479 576 1.6E-50 T 14-10-2018 IPR003711 CarD-like/TRCF domain VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SMART SM00490 826 910 5.3E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SMART SM00487 600 790 2.5E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Gene3D G3DSA:3.40.50.300 542 781 3.4E-235 T 14-10-2018 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SUPERFAMILY SSF143517 998 1146 5.1E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 5.4E-25 T 14-10-2018 IPR003711 CarD-like/TRCF domain VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 1.4E-45 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 5.1E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Gene3D G3DSA:3.30.2060.10 130 215 1.7E-119 T 14-10-2018 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SMART SM00982 1008 1108 3.3E-47 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Pfam PF03461 TRCF domain 1010 1101 1.9E-28 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SUPERFAMILY SSF52540 782 990 5.59E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SUPERFAMILY SSF141259 470 548 4.58E-24 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1108 27.91 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SUPERFAMILY SSF52540 11 340 1.31E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Gene3D G3DSA:3.40.50.11140 356 453 8.5E-34 T 14-10-2018 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Gene3D G3DSA:2.30.30.840 483 541 3.4E-235 T 14-10-2018 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Gene3D G3DSA:3.40.50.300 478 990 3.4E-235 T 14-10-2018 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SUPERFAMILY SSF52540 523 783 3.46E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 Gene3D G3DSA:3.40.50.11180 26 335 1.7E-119 T 14-10-2018 VV1_2078 96f39b3bf609258d6cf9628935f172a6 1153 SUPERFAMILY SSF52540 352 466 2.71E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0465 de82e569ae5f089b898b83350f082f97 499 SUPERFAMILY SSF53067 135 305 2.24E-45 T 14-10-2018 VV1_0465 de82e569ae5f089b898b83350f082f97 499 Gene3D G3DSA:3.30.420.150 113 291 3.1E-89 T 14-10-2018 VV1_0465 de82e569ae5f089b898b83350f082f97 499 Gene3D G3DSA:3.30.420.40 10 299 3.1E-89 T 14-10-2018 VV1_0465 de82e569ae5f089b898b83350f082f97 499 PIRSF PIRSF001267 1 499 2.0E-199 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VV1_0465 de82e569ae5f089b898b83350f082f97 499 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 302 4.5E-101 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VV1_0465 de82e569ae5f089b898b83350f082f97 499 Pfam PF02541 Ppx/GppA phosphatase family 22 304 5.7E-84 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VV1_0465 de82e569ae5f089b898b83350f082f97 499 SUPERFAMILY SSF109604 309 498 7.33E-50 T 14-10-2018 VV1_0465 de82e569ae5f089b898b83350f082f97 499 SUPERFAMILY SSF53067 9 128 1.62E-35 T 14-10-2018 VV1_0465 de82e569ae5f089b898b83350f082f97 499 Gene3D G3DSA:1.10.3210.10 307 499 2.6E-59 T 14-10-2018 VV2_0715 cc8e2c1bfab67a725ddb112a9651c140 146 SUPERFAMILY SSF55785 10 128 6.81E-12 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0715 cc8e2c1bfab67a725ddb112a9651c140 146 Pfam PF00989 PAS fold 16 134 1.9E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV2_0715 cc8e2c1bfab67a725ddb112a9651c140 146 Gene3D G3DSA:3.30.450.20 6 140 3.8E-32 T 14-10-2018 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 9.2E-105 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 Gene3D G3DSA:3.40.190.80 161 264 8.3E-26 T 14-10-2018 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 Gene3D G3DSA:3.30.540.10 6 160 2.1E-45 T 14-10-2018 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 SUPERFAMILY SSF56655 6 272 2.09E-77 T 14-10-2018 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 Pfam PF00459 Inositol monophosphatase family 8 252 1.1E-51 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 1.5E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 1.5E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 1.5E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 1.5E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 1.5E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0866 257f5c219cf8832e8b86f72257b93db3 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.119 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VV1_2914 866250307c8793e8ef2efef9d3bbaa65 257 Gene3D G3DSA:3.20.20.70 1 257 1.5E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2914 866250307c8793e8ef2efef9d3bbaa65 257 SUPERFAMILY SSF51366 1 256 1.26E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV1_2914 866250307c8793e8ef2efef9d3bbaa65 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.972 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VV1_2914 866250307c8793e8ef2efef9d3bbaa65 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 4.9E-115 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VV1_2914 866250307c8793e8ef2efef9d3bbaa65 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.9E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VV2_0541 46ab8dee18aedbe567a58b58eacb7651 323 Pfam PF03595 Voltage-dependent anion channel 16 308 6.0E-26 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VV2_0541 46ab8dee18aedbe567a58b58eacb7651 323 Gene3D G3DSA:1.50.10.150 10 314 1.7E-32 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 SUPERFAMILY SSF48600 4 88 1.04E-23 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 Gene3D G3DSA:3.40.50.720 81 247 7.0E-43 T 14-10-2018 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 SUPERFAMILY SSF51735 91 237 4.72E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 Gene3D G3DSA:1.10.3660.10 248 373 1.4E-48 T 14-10-2018 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 SMART SM00830 9 89 1.6E-28 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 4.8E-42 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 Gene3D G3DSA:1.20.59.10 1 80 4.7E-17 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 PIRSF PIRSF001499 1 374 6.6E-181 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 Pfam PF02153 Prephenate dehydrogenase 140 344 7.0E-32 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 SUPERFAMILY SSF48179 242 366 2.04E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_0494 72a747e98b7cfab8f4e6ba360fa15e23 375 Pfam PF01817 Chorismate mutase type II 9 87 4.2E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV2_0199 49272504123095ac6a9e4f56efcca9ae 325 SUPERFAMILY SSF53613 10 297 4.83E-69 T 14-10-2018 IPR029056 Ribokinase-like VV2_0199 49272504123095ac6a9e4f56efcca9ae 325 Gene3D G3DSA:3.40.1190.20 6 315 1.3E-93 T 14-10-2018 IPR029056 Ribokinase-like VV2_0199 49272504123095ac6a9e4f56efcca9ae 325 PIRSF PIRSF000535 6 315 8.8E-95 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VV2_0199 49272504123095ac6a9e4f56efcca9ae 325 Pfam PF00294 pfkB family carbohydrate kinase 29 298 3.7E-50 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VV2_0199 49272504123095ac6a9e4f56efcca9ae 325 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 313 7.8E-101 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 VV2_0199 49272504123095ac6a9e4f56efcca9ae 325 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 313 2.3E-100 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VV2_0199 49272504123095ac6a9e4f56efcca9ae 325 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VV1_2066 c3f259a4313fd44e3fe41585e511b111 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 636 5.8E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2066 c3f259a4313fd44e3fe41585e511b111 670 SMART SM00304 341 393 2.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2066 c3f259a4313fd44e3fe41585e511b111 670 SUPERFAMILY SSF58104 361 670 7.98E-72 T 14-10-2018 VV1_2066 c3f259a4313fd44e3fe41585e511b111 670 Gene3D G3DSA:1.10.287.950 341 670 6.7E-70 T 14-10-2018 VV1_2066 c3f259a4313fd44e3fe41585e511b111 670 SMART SM00283 408 669 3.0E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2669 6dbe6072752f700eccd5d6c50533a311 453 Pfam PF04932 O-Antigen ligase 240 376 1.2E-18 T 14-10-2018 IPR007016 O-antigen ligase-related VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 SUPERFAMILY SSF53955 186 382 4.5E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 193 727 6.6E-155 T 14-10-2018 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 Gene3D G3DSA:3.40.710.10 83 740 8.9E-261 T 14-10-2018 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 Gene3D G3DSA:3.30.2060.10 91 180 8.9E-261 T 14-10-2018 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 SUPERFAMILY SSF56601 342 769 1.3E-108 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 48 770 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 Pfam PF14814 Bifunctional transglycosylase second domain 93 177 7.4E-26 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 Pfam PF00912 Transglycosylase 189 360 7.7E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 Pfam PF00905 Penicillin binding protein transpeptidase domain 452 690 3.6E-24 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 Gene3D G3DSA:1.10.3810.10 181 384 8.9E-261 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1651 c55b0ce11531c9f06f15ed3abc25b16b 789 PIRSF PIRSF002799 5 789 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 648 2.4E-32 T 14-10-2018 IPR000160 GGDEF domain VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 Gene3D G3DSA:1.25.40.10 146 424 3.5E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SUPERFAMILY SSF48452 178 351 1.27E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 Pfam PF00990 Diguanylate cyclase, GGDEF domain 492 646 6.4E-32 T 14-10-2018 IPR000160 GGDEF domain VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 Gene3D G3DSA:3.30.70.270 480 650 2.4E-37 T 14-10-2018 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 Pfam PF13181 Tetratricopeptide repeat 264 290 0.021 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SMART SM00267 480 650 4.7E-35 T 14-10-2018 IPR000160 GGDEF domain VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SMART SM00028 179 212 54.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SMART SM00028 219 252 0.0095 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SMART SM00028 261 294 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SMART SM00028 381 414 56.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SMART SM00028 301 334 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 Pfam PF13424 Tetratricopeptide repeat 183 250 4.4E-8 T 14-10-2018 VV2_0387 bfcb3e2dd447a5bc95a90008fafae601 654 SUPERFAMILY SSF55073 496 648 1.26E-31 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0445 7abd858adb2b43ebe7aefb9ea8172c55 405 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 400 3.8E-127 T 14-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein VV2_0445 7abd858adb2b43ebe7aefb9ea8172c55 405 Pfam PF00498 FHA domain 33 101 3.0E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VV2_0445 7abd858adb2b43ebe7aefb9ea8172c55 405 SMART SM00240 31 82 8.1E-9 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VV2_0445 7abd858adb2b43ebe7aefb9ea8172c55 405 SUPERFAMILY SSF49879 23 110 3.44E-20 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VV2_0445 7abd858adb2b43ebe7aefb9ea8172c55 405 Gene3D G3DSA:2.60.200.20 8 126 1.9E-19 T 14-10-2018 VV1_0813 8a54df24fcc6f014a598e1d04f7c364f 611 PIRSF PIRSF004950 1 611 4.3E-227 T 14-10-2018 IPR012159 Inner membrane protein YejM VV1_0813 8a54df24fcc6f014a598e1d04f7c364f 611 Pfam PF00884 Sulfatase 248 527 1.2E-32 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV1_0813 8a54df24fcc6f014a598e1d04f7c364f 611 SUPERFAMILY SSF53649 245 594 2.86E-58 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_0813 8a54df24fcc6f014a598e1d04f7c364f 611 Pfam PF11893 Domain of unknown function (DUF3413) 3 239 1.2E-55 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VV1_0813 8a54df24fcc6f014a598e1d04f7c364f 611 Gene3D G3DSA:3.40.720.10 237 562 6.9E-58 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_1552 87223f2faf0051633058bd6d827936e3 391 Pfam PF01494 FAD binding domain 4 335 8.7E-24 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VV1_1552 87223f2faf0051633058bd6d827936e3 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VV1_1552 87223f2faf0051633058bd6d827936e3 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 387 3.2E-123 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VV1_1552 87223f2faf0051633058bd6d827936e3 391 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 387 1.4E-146 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 VV1_1552 87223f2faf0051633058bd6d827936e3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 3.1E-10 T 14-10-2018 VV1_1552 87223f2faf0051633058bd6d827936e3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.1E-10 T 14-10-2018 VV1_1552 87223f2faf0051633058bd6d827936e3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.1E-10 T 14-10-2018 VV1_1552 87223f2faf0051633058bd6d827936e3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 3.1E-10 T 14-10-2018 VV1_1552 87223f2faf0051633058bd6d827936e3 391 SUPERFAMILY SSF51905 3 381 7.13E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1552 87223f2faf0051633058bd6d827936e3 391 Gene3D G3DSA:3.50.50.60 5 335 5.0E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1552 87223f2faf0051633058bd6d827936e3 391 Gene3D G3DSA:3.30.9.50 80 269 5.0E-96 T 14-10-2018 VV2_0812 d03be1cd1fb67bfc493670a4bad9609d 281 Gene3D G3DSA:2.30.30.60 112 168 2.6E-5 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VV2_0812 d03be1cd1fb67bfc493670a4bad9609d 281 SUPERFAMILY SSF50182 96 169 8.5E-11 T 14-10-2018 IPR010920 LSM domain superfamily VV2_0812 d03be1cd1fb67bfc493670a4bad9609d 281 Pfam PF00924 Mechanosensitive ion channel 57 184 4.6E-17 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 Gene3D G3DSA:3.40.50.1820 5 254 1.0E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 SUPERFAMILY SSF53474 5 253 2.13E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 2.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 2.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 2.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 2.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 2.0E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VV1_0171 432ae79c5add3c7b6aa72c6cb024d192 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 Gene3D G3DSA:3.30.450.20 311 440 5.8E-13 T 14-10-2018 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 PIRSF PIRSF036431 1 686 2.7E-144 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 Pfam PF13426 PAS domain 319 422 3.8E-6 T 14-10-2018 IPR000014 PAS domain VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 Gene3D G3DSA:3.30.450.20 54 169 8.9E-10 T 14-10-2018 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 305 431 1.3E-10 T 14-10-2018 IPR000014 PAS domain VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 SUPERFAMILY SSF47384 451 528 1.08E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 625 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 660 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 639 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 SUPERFAMILY SSF55785 321 433 1.13E-12 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 Gene3D G3DSA:1.10.287.130 441 527 1.6E-12 T 14-10-2018 VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 Gene3D G3DSA:3.30.565.10 533 683 1.3E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 SMART SM00086 384 424 0.0025 T 14-10-2018 IPR001610 PAC motif VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 572 680 6.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 SMART SM00387 572 682 4.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0987 f2cb5633c69dc43f38eb6f0727ed740d 686 SUPERFAMILY SSF55874 533 681 2.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0707 1802912bed60b58f05ab43f4128315c8 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 Gene3D G3DSA:3.40.190.80 200 337 8.6E-60 T 14-10-2018 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 SUPERFAMILY SSF56655 3 331 4.65E-114 T 14-10-2018 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PIRSF PIRSF500210 1 336 2.0E-127 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.886 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.6E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.6E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.6E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.6E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.6E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.6E-76 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 Gene3D G3DSA:3.30.540.10 4 198 4.6E-76 T 14-10-2018 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 PIRSF PIRSF000904 1 337 9.2E-125 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0707 1802912bed60b58f05ab43f4128315c8 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.0E-77 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VV1_0711 cad11cfd4b8f11c8431231d200607e3a 1251 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 915 1250 8.0E-62 T 14-10-2018 IPR007452 Translocation and assembly module TamB VV1_1945 a0fb28a2571439733c965b772346055d 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 1.3E-82 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 Pfam PF00813 FliP family 92 283 6.7E-80 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 5.1E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV1_1945 a0fb28a2571439733c965b772346055d 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.1E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VV2_1259 8ea24a7b03d32c9a40b7b4170d52a2e8 222 SUPERFAMILY SSF56925 20 218 2.2E-16 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV2_1259 8ea24a7b03d32c9a40b7b4170d52a2e8 222 Gene3D G3DSA:2.40.160.20 10 221 3.0E-17 T 14-10-2018 VV2_1259 8ea24a7b03d32c9a40b7b4170d52a2e8 222 Pfam PF13505 Outer membrane protein beta-barrel domain 7 218 3.6E-16 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 Gene3D G3DSA:3.40.50.10380 6 170 1.7E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 PIRSF PIRSF000106 25 425 1.5E-71 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 SUPERFAMILY SSF53223 20 171 4.03E-52 T 14-10-2018 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 SMART SM00919 173 409 2.2E-136 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 SUPERFAMILY SSF51735 173 421 3.72E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 Gene3D G3DSA:3.40.50.720 171 425 1.7E-81 T 14-10-2018 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 SMART SM01274 28 161 1.2E-75 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 1.7E-24 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VV1_1361 e7bdfcbde14910b865bd786ed4535de6 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 125 4.1E-21 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:1.20.1640.10 509 1008 6.1E-265 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:3.30.70.1430 556 654 6.1E-265 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:3.30.2090.10 179 270 6.1E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:3.30.70.1320 135 328 6.1E-265 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 SUPERFAMILY SSF82866 292 491 1.07E-37 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:3.30.70.1430 40 804 6.1E-265 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 SUPERFAMILY SSF82693 40 135 1.96E-20 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:3.30.2090.10 706 796 6.1E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 SUPERFAMILY SSF82714 708 788 1.09E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 SUPERFAMILY SSF82693 136 325 1.01E-21 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.7E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:1.20.1640.10 10 508 6.1E-265 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 SUPERFAMILY SSF82714 184 266 3.4E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 SUPERFAMILY SSF82866 795 1015 5.1E-44 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Gene3D G3DSA:3.30.70.1440 655 856 6.1E-265 T 14-10-2018 VV2_0195 12dfbbf74c0bf789fe92147189401b03 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 1.5E-175 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0600 db8bc8a3da022e5d1a37dde281d33cb6 313 Gene3D G3DSA:3.40.50.720 1 118 1.3E-25 T 14-10-2018 VV2_0600 db8bc8a3da022e5d1a37dde281d33cb6 313 SUPERFAMILY SSF55347 121 269 1.18E-44 T 14-10-2018 VV2_0600 db8bc8a3da022e5d1a37dde281d33cb6 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 2.3E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VV2_0600 db8bc8a3da022e5d1a37dde281d33cb6 313 SUPERFAMILY SSF51735 1 136 3.58E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0600 db8bc8a3da022e5d1a37dde281d33cb6 313 Gene3D G3DSA:3.30.360.10 119 312 1.4E-54 T 14-10-2018 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 SMART SM00421 152 209 6.6E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 Gene3D G3DSA:3.40.50.2300 24 139 4.2E-7 T 14-10-2018 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 SUPERFAMILY SSF46894 150 210 3.4E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 Gene3D G3DSA:1.10.10.10 148 211 7.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2744 6fbe17fc76dffc3822615e44935939b2 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 2.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 224 1.4E-19 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 559 6.6E-80 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 SUPERFAMILY SSF56519 65 237 4.58E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 22 574 45.219 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 Gene3D G3DSA:3.30.450.330 239 563 9.2E-107 T 14-10-2018 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 Gene3D G3DSA:3.90.1310.30 62 237 5.0E-45 T 14-10-2018 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 Gene3D G3DSA:3.40.710.10 299 481 9.2E-107 T 14-10-2018 VV1_0584 de74ebd35187cc3900c89f2c7745848c 576 SUPERFAMILY SSF56601 239 570 2.32E-93 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 8.9E-74 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 PIRSF PIRSF001430 1 256 1.6E-76 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 Gene3D G3DSA:3.30.70.660 105 242 9.3E-48 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 Gene3D G3DSA:3.30.70.580 1 104 5.0E-40 T 14-10-2018 VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.715 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 SUPERFAMILY SSF55120 1 255 1.44E-93 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 2.4E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1992 69c5b6d4638e5157cc54c7126ddfcd2c 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 5.7E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV2_1479 a7134515b6909e021239c90b90272557 413 SUPERFAMILY SSF103473 13 404 1.22E-55 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_1479 a7134515b6909e021239c90b90272557 413 Gene3D G3DSA:1.20.1250.20 14 409 3.3E-49 T 14-10-2018 VV2_1479 a7134515b6909e021239c90b90272557 413 Pfam PF07690 Major Facilitator Superfamily 23 354 1.9E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_1479 a7134515b6909e021239c90b90272557 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 2.4E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 SUPERFAMILY SSF53790 13 232 5.63E-86 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 Gene3D G3DSA:3.40.1010.10 2 120 2.7E-48 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 Gene3D G3DSA:3.30.950.10 121 241 1.6E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 PIRSF PIRSF005917 1 287 1.2E-108 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 3.0E-102 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VV1_0588 dbeda4eb809436a2573eb14fb9e6391b 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.608 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.222 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 SUPERFAMILY SSF52540 25 256 1.98E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.3E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 2.0E-116 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-39 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.3E-146 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 Gene3D G3DSA:3.40.50.300 25 186 3.9E-41 T 14-10-2018 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 Gene3D G3DSA:1.10.8.60 187 260 2.1E-30 T 14-10-2018 VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 SMART SM00382 56 189 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2160 88f25f23552c5f7a862d4658794a87c2 334 SUPERFAMILY SSF46785 262 332 2.39E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0018 0cd754e14242d26d4bbc470a443efad8 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VV1_0018 0cd754e14242d26d4bbc470a443efad8 619 Gene3D G3DSA:3.10.50.40 261 393 7.0E-33 T 14-10-2018 VV1_0018 0cd754e14242d26d4bbc470a443efad8 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 4.1E-25 T 14-10-2018 VV1_0018 0cd754e14242d26d4bbc470a443efad8 619 SUPERFAMILY SSF109998 39 242 3.73E-39 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VV1_0018 0cd754e14242d26d4bbc470a443efad8 619 Gene3D G3DSA:1.10.4030.30 41 194 7.2E-13 T 14-10-2018 VV1_0018 0cd754e14242d26d4bbc470a443efad8 619 Pfam PF13624 SurA N-terminal domain 1 166 2.5E-50 T 14-10-2018 VV1_0018 0cd754e14242d26d4bbc470a443efad8 619 SUPERFAMILY SSF54534 224 361 2.35E-30 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 ProSitePatterns PS01047 Heavy-metal-associated domain. 103 132 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 265 766 8.0E-82 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 Gene3D G3DSA:3.40.1110.10 504 621 4.4E-80 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 495 501 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 SUPERFAMILY SSF56784 492 787 1.22E-50 T 14-10-2018 IPR036412 HAD-like superfamily VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 242 789 4.8E-170 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 ProSitePatterns PS01229 Hypothetical cof family signature 2. 687 709 - T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 SUPERFAMILY SSF81653 298 392 1.7E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 Gene3D G3DSA:3.40.50.1000 474 739 4.4E-80 T 14-10-2018 IPR023214 HAD superfamily VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 SUPERFAMILY SSF55008 100 165 3.01E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 SUPERFAMILY SSF81665 245 775 1.09E-18 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 687 706 1.2E-27 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 646 1.2E-27 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 722 1.2E-27 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 493 507 1.2E-27 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 625 1.2E-27 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 342 356 1.2E-27 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 Gene3D G3DSA:3.30.70.100 96 162 1.9E-12 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 Pfam PF00403 Heavy-metal-associated domain 103 153 7.5E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 Gene3D G3DSA:2.70.150.20 292 397 5.9E-29 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00941 Cadmium-transporting ATPase signature 112 133 3.8E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00941 Cadmium-transporting ATPase signature 377 391 3.8E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 PRINTS PR00941 Cadmium-transporting ATPase signature 277 297 3.8E-6 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 Pfam PF00122 E1-E2 ATPase 294 473 3.0E-47 T 14-10-2018 VV1_2063 1b87d1f24feaef4934428c47aadc083e 797 Pfam PF00702 haloacid dehalogenase-like hydrolase 490 700 2.3E-38 T 14-10-2018 VV1_1034 4ab1c97dd41fe5bf66bcb85124b723bf 324 Pfam PF11059 Protein of unknown function (DUF2860) 32 323 1.4E-112 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VV1_1034 4ab1c97dd41fe5bf66bcb85124b723bf 324 PIRSF PIRSF028696 1 324 3.1E-130 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.5E-32 T 14-10-2018 VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF00557 Metallopeptidase family M24 310 524 1.4E-43 T 14-10-2018 IPR000994 Peptidase M24 VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 Gene3D G3DSA:3.90.230.10 300 593 3.0E-94 T 14-10-2018 VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 134 2.1E-18 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 Pfam PF16188 C-terminal region of peptidase_M24 534 593 1.5E-21 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 Gene3D G3DSA:3.40.350.10 1 146 3.2E-36 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 Gene3D G3DSA:3.40.350.10 147 290 9.8E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 SUPERFAMILY SSF53092 7 130 7.15E-19 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VV1_0958 1bb8da01e1708445f97abe96640d4f9b 595 SUPERFAMILY SSF55920 303 559 2.75E-55 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 SUPERFAMILY SSF50156 196 291 7.76E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 Gene3D G3DSA:2.30.42.10 226 313 5.9E-18 T 14-10-2018 VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 Pfam PF02163 Peptidase family M50 11 440 6.9E-86 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 SUPERFAMILY SSF50156 89 185 8.28E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 SMART SM00228 212 281 1.5E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 SMART SM00228 115 186 11.0 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 452 6.2E-140 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VV1_1867 62f26c5fad2b93a599e51de924d722a0 452 Gene3D G3DSA:2.30.42.10 126 221 4.4E-32 T 14-10-2018 VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 Pfam PF00106 short chain dehydrogenase 3 185 1.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 Gene3D G3DSA:3.40.50.720 2 262 2.1E-56 T 14-10-2018 VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0200 6a679feee7554cb8294c2568b72c3eb7 275 SUPERFAMILY SSF51735 2 270 3.4E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1233 668ca28313a3e435a9f05919468ff562 295 Gene3D G3DSA:3.40.50.150 102 294 1.9E-55 T 14-10-2018 VV1_1233 668ca28313a3e435a9f05919468ff562 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.279 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VV1_1233 668ca28313a3e435a9f05919468ff562 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.2E-104 T 14-10-2018 VV1_1233 668ca28313a3e435a9f05919468ff562 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 2.4E-108 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VV1_1233 668ca28313a3e435a9f05919468ff562 295 PIRSF PIRSF000401 1 295 3.0E-99 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VV1_1233 668ca28313a3e435a9f05919468ff562 295 SUPERFAMILY SSF53335 44 274 1.52E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 Pfam PF08447 PAS fold 31 114 5.0E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 SUPERFAMILY SSF55785 20 114 2.97E-24 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 Gene3D G3DSA:3.30.450.20 4 121 1.6E-22 T 14-10-2018 VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 482 5.7E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 SUPERFAMILY SSF58104 238 518 2.88E-59 T 14-10-2018 VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 SMART SM00283 257 518 1.2E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 SMART SM00091 8 75 0.0094 T 14-10-2018 IPR000014 PAS domain VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 110 4.7E-11 T 14-10-2018 IPR000014 PAS domain VV2_0557 ba4820579b823da215a68d1d1d9137d5 520 Gene3D G3DSA:1.10.287.950 227 520 2.2E-54 T 14-10-2018 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 Gene3D G3DSA:2.40.50.180 44 160 2.5E-29 T 14-10-2018 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 SUPERFAMILY SSF52172 193 318 4.13E-28 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 SMART SM00260 14 160 1.6E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 PIRSF PIRSF002867 1 325 1.3E-100 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 Gene3D G3DSA:3.40.50.2300 179 322 1.4E-28 T 14-10-2018 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 SMART SM00448 193 318 4.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 Gene3D G3DSA:2.30.30.40 36 154 2.5E-29 T 14-10-2018 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 SUPERFAMILY SSF50341 7 165 4.97E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 Pfam PF01584 CheW-like domain 35 162 1.6E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_0068 2f3e6dda9df77fd4c07b16224d21ec8d 327 Pfam PF00072 Response regulator receiver domain 195 313 7.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0094 64578bc11bfc87d40d35b4dbe1e717c1 199 Pfam PF16964 Putative tight adherence pilin protein F 8 192 2.5E-28 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F VV1_0354 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 115 263 1.83E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VV1_0354 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.10.230.10 141 211 3.3E-25 T 14-10-2018 VV1_0354 f22db398e269900baa066e335ee4ff4f 381 Pfam PF01556 DnaJ C terminal domain 123 335 4.9E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal VV1_0354 f22db398e269900baa066e335ee4ff4f 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 3.3E-141 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VV1_0354 f22db398e269900baa066e335ee4ff4f 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site VV1_0354 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:1.10.287.110 1 115 2.5E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_0354 f22db398e269900baa066e335ee4ff4f 381 Gene3D G3DSA:2.60.260.20 257 365 6.5E-29 T 14-10-2018 VV1_0354 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF49493 261 346 6.28E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VV1_0354 f22db398e269900baa066e335ee4ff4f 381 Pfam PF00684 DnaJ central domain 149 209 6.4E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VV1_0354 f22db398e269900baa066e335ee4ff4f 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.93 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VV1_0354 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF57938 136 212 4.05E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VV1_0354 f22db398e269900baa066e335ee4ff4f 381 SMART SM00271 4 62 1.7E-31 T 14-10-2018 IPR001623 DnaJ domain VV1_0354 f22db398e269900baa066e335ee4ff4f 381 SUPERFAMILY SSF46565 1 110 3.79E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_0354 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VV1_0354 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VV1_0354 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VV1_0354 f22db398e269900baa066e335ee4ff4f 381 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 14-10-2018 IPR001623 DnaJ domain VV1_0354 f22db398e269900baa066e335ee4ff4f 381 Pfam PF00226 DnaJ domain 5 67 2.5E-27 T 14-10-2018 IPR001623 DnaJ domain VV1_1427 c769daa97782bca38358b914c5dca694 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VV1_1427 c769daa97782bca38358b914c5dca694 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1427 c769daa97782bca38358b914c5dca694 940 Gene3D G3DSA:3.30.190.20 130 243 1.2E-245 T 14-10-2018 VV1_1427 c769daa97782bca38358b914c5dca694 940 Gene3D G3DSA:1.20.1580.10 691 829 1.0E-139 T 14-10-2018 VV1_1427 c769daa97782bca38358b914c5dca694 940 SUPERFAMILY SSF52540 4 568 1.78E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1427 c769daa97782bca38358b914c5dca694 940 Gene3D G3DSA:1.20.1580.10 90 491 1.2E-245 T 14-10-2018 VV1_1427 c769daa97782bca38358b914c5dca694 940 Pfam PF00005 ABC transporter 622 859 7.1E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1427 c769daa97782bca38358b914c5dca694 940 Gene3D G3DSA:1.10.8.280 286 402 1.2E-245 T 14-10-2018 VV1_1427 c769daa97782bca38358b914c5dca694 940 Gene3D G3DSA:3.40.50.300 6 593 1.2E-245 T 14-10-2018 VV1_1427 c769daa97782bca38358b914c5dca694 940 Gene3D G3DSA:3.40.50.300 616 935 1.0E-139 T 14-10-2018 VV1_1427 c769daa97782bca38358b914c5dca694 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1427 c769daa97782bca38358b914c5dca694 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.891 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VV1_1427 c769daa97782bca38358b914c5dca694 940 SUPERFAMILY SSF52540 620 912 2.72E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1276 3407e866a79f805d3212a959db5425e9 270 SUPERFAMILY SSF53850 24 269 2.1E-21 T 14-10-2018 VV2_1276 3407e866a79f805d3212a959db5425e9 270 Gene3D G3DSA:3.40.190.10 107 201 2.4E-13 T 14-10-2018 VV2_1276 3407e866a79f805d3212a959db5425e9 270 Gene3D G3DSA:3.40.190.10 44 203 2.4E-13 T 14-10-2018 VV2_1276 3407e866a79f805d3212a959db5425e9 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 214 4.8E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0016 150120e1acdc92aa37faed5c0ba0aebb 360 Gene3D G3DSA:2.120.10.30 19 360 1.3E-97 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VV2_0016 150120e1acdc92aa37faed5c0ba0aebb 360 SUPERFAMILY SSF50952 21 354 2.75E-39 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 VV2_0016 150120e1acdc92aa37faed5c0ba0aebb 360 Pfam PF07995 Glucose / Sorbosone dehydrogenase 35 355 2.0E-110 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase VV1_0300 888f52ab1c5ddaed817e12b3b8125d6d 458 Gene3D G3DSA:3.40.50.450 121 450 2.9E-125 T 14-10-2018 VV1_0300 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 6.4E-51 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VV1_0300 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF03641 Possible lysine decarboxylase 187 325 3.5E-34 T 14-10-2018 IPR031100 LOG family VV1_0300 888f52ab1c5ddaed817e12b3b8125d6d 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 3.2E-57 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VV1_0300 888f52ab1c5ddaed817e12b3b8125d6d 458 SUPERFAMILY SSF102405 119 327 7.48E-41 T 14-10-2018 VV1_0300 888f52ab1c5ddaed817e12b3b8125d6d 458 Gene3D G3DSA:3.30.1850.10 1 120 1.6E-57 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VV1_1142 14c90162c748c860b5f40340ba81c477 169 Gene3D G3DSA:3.90.190.10 8 169 2.6E-29 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VV1_1142 14c90162c748c860b5f40340ba81c477 169 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 114 124 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VV1_1142 14c90162c748c860b5f40340ba81c477 169 SUPERFAMILY SSF52799 17 164 8.16E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like VV1_1142 14c90162c748c860b5f40340ba81c477 169 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 20 133 2.1E-8 T 14-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV1_1142 14c90162c748c860b5f40340ba81c477 169 SMART SM00404 72 168 0.0038 T 14-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF55424 344 463 1.89E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 SUPERFAMILY SSF51905 5 319 2.35E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.50.50.60 158 276 1.4E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.30.390.30 345 464 1.8E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PIRSF PIRSF000350 1 463 5.4E-71 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 7.3E-52 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 4.1E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.4E-28 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.4E-28 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.4E-28 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-28 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.4E-28 T 14-10-2018 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 9.5E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.336 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VV1_1168 1dc51d1e3c87f631ee57c7295b0b175e 466 Gene3D G3DSA:3.50.50.60 7 333 1.4E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 Gene3D G3DSA:3.90.1380.10 1 79 8.8E-31 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 TIGRFAM TIGR00260 thrC: threonine synthase 53 391 1.2E-114 T 14-10-2018 IPR004450 Threonine synthase-like VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 SUPERFAMILY SSF53686 1 424 6.16E-132 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 Gene3D G3DSA:3.40.50.1100 101 399 4.5E-138 T 14-10-2018 VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 Pfam PF14821 Threonine synthase N terminus 8 78 5.1E-8 T 14-10-2018 IPR029144 Threonine synthase, N-terminal VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 Gene3D G3DSA:3.40.50.1100 83 392 4.5E-138 T 14-10-2018 VV1_0543 a4dea1c46db27b087ebc138f48a184b5 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 368 3.1E-23 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 PIRSF PIRSF036979 76 398 5.4E-31 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 PRINTS PR00116 Arginase signature 198 213 2.1E-21 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 PRINTS PR00116 Arginase signature 226 253 2.1E-21 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 PRINTS PR00116 Arginase signature 276 294 2.1E-21 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 PRINTS PR00116 Arginase signature 325 354 2.1E-21 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 SUPERFAMILY SSF52768 136 400 8.46E-60 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 Pfam PF00491 Arginase family 139 396 7.2E-54 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 Gene3D G3DSA:3.30.70.100 1 89 1.6E-11 T 14-10-2018 VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 7.2E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 SUPERFAMILY SSF54909 2 82 4.73E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV2_0243 b3e914d5e6047694d1fd29c2cabc6d45 402 Gene3D G3DSA:3.40.800.10 95 399 8.6E-65 T 14-10-2018 VV1_0246 3e14a07129facb368646481c19674d6e 347 SUPERFAMILY SSF55120 66 227 1.64E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_0246 3e14a07129facb368646481c19674d6e 347 Gene3D G3DSA:3.10.290.10 1 61 8.1E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_0246 3e14a07129facb368646481c19674d6e 347 SUPERFAMILY SSF55174 7 97 5.72E-15 T 14-10-2018 VV1_0246 3e14a07129facb368646481c19674d6e 347 Pfam PF00849 RNA pseudouridylate synthase 67 193 2.9E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_0246 3e14a07129facb368646481c19674d6e 347 SMART SM00363 7 65 2.6E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0246 3e14a07129facb368646481c19674d6e 347 Pfam PF01479 S4 domain 8 52 7.6E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0246 3e14a07129facb368646481c19674d6e 347 Gene3D G3DSA:3.30.70.1560 132 205 4.5E-54 T 14-10-2018 VV1_0246 3e14a07129facb368646481c19674d6e 347 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_0246 3e14a07129facb368646481c19674d6e 347 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.3E-47 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_0246 3e14a07129facb368646481c19674d6e 347 Gene3D G3DSA:3.30.70.580 68 227 4.5E-54 T 14-10-2018 VV2_1645 149e3782420698416a74da0c21fc0ad7 664 Gene3D G3DSA:1.10.287.950 334 664 4.0E-62 T 14-10-2018 VV2_1645 149e3782420698416a74da0c21fc0ad7 664 SUPERFAMILY SSF58104 355 664 2.35E-63 T 14-10-2018 VV2_1645 149e3782420698416a74da0c21fc0ad7 664 SMART SM00283 402 663 2.4E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1645 149e3782420698416a74da0c21fc0ad7 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 629 4.4E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1645 149e3782420698416a74da0c21fc0ad7 664 Pfam PF08376 Nitrate and nitrite sensing 59 296 1.0E-34 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein VV2_1645 149e3782420698416a74da0c21fc0ad7 664 SMART SM00304 334 387 0.0055 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54814 2 106 1.62E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.1140.32 108 208 3.1E-45 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 6.5E-42 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.991 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-98 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 SUPERFAMILY SSF54821 108 206 7.72E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 Gene3D G3DSA:3.30.300.20 17 107 5.9E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV1_0756 5bebf174d373222397797f0f6845fcb8 233 Pfam PF07650 KH domain 38 111 4.1E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0756 5bebf174d373222397797f0f6845fcb8 233 SMART SM00322 60 125 7.4E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 SMART SM00304 157 209 8.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 SUPERFAMILY SSF55874 265 424 2.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1413 33d44e70ee665b84411a702f8a41068e 426 SMART SM00387 318 426 1.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1413 33d44e70ee665b84411a702f8a41068e 426 Gene3D G3DSA:3.30.565.10 280 426 4.4E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1413 33d44e70ee665b84411a702f8a41068e 426 SUPERFAMILY SSF47384 194 275 2.55E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 424 1.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1413 33d44e70ee665b84411a702f8a41068e 426 SMART SM00388 210 275 1.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 274 6.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 Pfam PF00672 HAMP domain 159 204 2.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 Gene3D G3DSA:1.10.287.130 161 276 8.7E-22 T 14-10-2018 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 SUPERFAMILY SSF158472 158 208 9.81E-5 T 14-10-2018 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1413 33d44e70ee665b84411a702f8a41068e 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 Gene3D G3DSA:3.90.1150.10 10 468 3.0E-197 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 7.0E-301 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 Gene3D G3DSA:3.40.640.10 61 334 3.0E-197 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 96.835 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 Pfam PF01212 Beta-eliminating lyase 49 437 1.5E-87 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 PIRSF PIRSF001386 3 472 9.1E-206 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 VV2_0854 40c68d754f998ef6d09fbb90fe00d822 473 SUPERFAMILY SSF53383 6 471 3.33E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2972 9c4aa559cde1a5911a6f8d1aace7ea81 276 Pfam PF00005 ABC transporter 31 180 5.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2972 9c4aa559cde1a5911a6f8d1aace7ea81 276 SUPERFAMILY SSF52540 5 253 1.85E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2972 9c4aa559cde1a5911a6f8d1aace7ea81 276 SMART SM00382 39 239 7.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2972 9c4aa559cde1a5911a6f8d1aace7ea81 276 Gene3D G3DSA:3.40.50.300 2 275 6.7E-86 T 14-10-2018 VV1_2972 9c4aa559cde1a5911a6f8d1aace7ea81 276 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2239 d5ac85f027de077377d3fd321edb2fe7 428 PIRSF PIRSF006066 1 427 5.9E-75 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV1_2239 d5ac85f027de077377d3fd321edb2fe7 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 1.3E-107 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV1_2239 d5ac85f027de077377d3fd321edb2fe7 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 2.3E-100 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV2_1617 adc40409fa79d35235eb05ec3feff529 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 3.4E-89 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VV2_1617 adc40409fa79d35235eb05ec3feff529 176 Gene3D G3DSA:2.30.110.10 11 175 1.8E-55 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VV2_1617 adc40409fa79d35235eb05ec3feff529 176 SUPERFAMILY SSF50475 12 162 6.55E-34 T 14-10-2018 VV2_1617 adc40409fa79d35235eb05ec3feff529 176 PIRSF PIRSF004633 1 176 6.6E-80 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VV2_1617 adc40409fa79d35235eb05ec3feff529 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 5.5E-19 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_1337 217a8ec98c753f56d28e47fbac5cc30d 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 721 4.0E-117 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VV2_1337 217a8ec98c753f56d28e47fbac5cc30d 721 Gene3D G3DSA:2.40.170.20 179 721 5.8E-131 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV2_1337 217a8ec98c753f56d28e47fbac5cc30d 721 Pfam PF00593 TonB dependent receptor 250 719 4.3E-59 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV2_1337 217a8ec98c753f56d28e47fbac5cc30d 721 Gene3D G3DSA:2.170.130.10 48 178 1.8E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VV2_1337 217a8ec98c753f56d28e47fbac5cc30d 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 167 6.0E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV2_1337 217a8ec98c753f56d28e47fbac5cc30d 721 SUPERFAMILY SSF56935 38 721 1.31E-134 T 14-10-2018 VV2_1337 217a8ec98c753f56d28e47fbac5cc30d 721 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 14-10-2018 IPR010916 TonB box, conserved site VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 SUPERFAMILY SSF46689 144 191 6.72E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 Pfam PF02805 Metal binding domain of Ada 14 77 4.3E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 Gene3D G3DSA:1.10.10.60 86 194 2.8E-24 T 14-10-2018 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 Gene3D G3DSA:3.30.310.20 202 319 1.9E-21 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 SMART SM01009 201 319 8.6E-30 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 Gene3D G3DSA:1.10.340.30 320 420 4.9E-19 T 14-10-2018 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 SUPERFAMILY SSF55945 202 301 1.02E-25 T 14-10-2018 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 SUPERFAMILY SSF46689 92 139 2.96E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 Pfam PF06029 AlkA N-terminal domain 202 319 8.5E-34 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 Gene3D G3DSA:3.40.10.10 4 79 1.6E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 SUPERFAMILY SSF48150 311 459 1.01E-27 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 SUPERFAMILY SSF57884 7 91 7.72E-34 T 14-10-2018 IPR035451 Ada-like domain superfamily VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 SMART SM00342 106 189 7.1E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1208 a0ae8bf707f04a7155d617c99c2bdc70 461 Pfam PF12833 Helix-turn-helix domain 112 190 3.7E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_1682 7b69bc52349dddaac917deb0e12f2331 430 Gene3D G3DSA:2.70.70.10 267 396 3.1E-80 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1682 7b69bc52349dddaac917deb0e12f2331 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 6.5E-6 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VV1_1682 7b69bc52349dddaac917deb0e12f2331 430 Pfam PF01551 Peptidase family M23 296 390 8.5E-31 T 14-10-2018 IPR016047 Peptidase M23 VV1_1682 7b69bc52349dddaac917deb0e12f2331 430 Gene3D G3DSA:3.10.450.350 174 409 3.1E-80 T 14-10-2018 VV1_1682 7b69bc52349dddaac917deb0e12f2331 430 Gene3D G3DSA:3.10.450.350 70 159 1.9E-12 T 14-10-2018 VV1_1682 7b69bc52349dddaac917deb0e12f2331 430 SUPERFAMILY SSF51261 146 391 1.26E-69 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1682 7b69bc52349dddaac917deb0e12f2331 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 153 6.1E-5 T 14-10-2018 IPR007340 Opacity-associated protein A VV1_1770 e80b92f2e50455416ea0818856856b65 339 Gene3D G3DSA:3.90.25.10 194 329 2.5E-145 T 14-10-2018 VV1_1770 e80b92f2e50455416ea0818856856b65 339 SUPERFAMILY SSF51735 2 336 1.46E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1770 e80b92f2e50455416ea0818856856b65 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 4.6E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain VV1_1770 e80b92f2e50455416ea0818856856b65 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 3.1E-141 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VV1_1770 e80b92f2e50455416ea0818856856b65 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 9.5E-6 T 14-10-2018 VV1_1770 e80b92f2e50455416ea0818856856b65 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.5E-6 T 14-10-2018 VV1_1770 e80b92f2e50455416ea0818856856b65 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.5E-6 T 14-10-2018 VV1_1770 e80b92f2e50455416ea0818856856b65 339 Gene3D G3DSA:3.40.50.720 3 274 2.5E-145 T 14-10-2018 VV1_1392 5403a6802037f77bf9a0384b71c7513e 495 SUPERFAMILY SSF52540 228 479 1.98E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1392 5403a6802037f77bf9a0384b71c7513e 495 Gene3D G3DSA:1.10.860.10 43 207 8.8E-56 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VV1_1392 5403a6802037f77bf9a0384b71c7513e 495 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 51 488 3.5E-176 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VV1_1392 5403a6802037f77bf9a0384b71c7513e 495 Gene3D G3DSA:3.40.50.300 208 487 1.4E-105 T 14-10-2018 VV1_1392 5403a6802037f77bf9a0384b71c7513e 495 Pfam PF03796 DnaB-like helicase C terminal domain 230 486 3.5E-112 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VV1_1392 5403a6802037f77bf9a0384b71c7513e 495 Pfam PF00772 DnaB-like helicase N terminal domain 51 152 4.0E-37 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VV1_1392 5403a6802037f77bf9a0384b71c7513e 495 SUPERFAMILY SSF48024 49 160 6.67E-39 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 Gene3D G3DSA:3.40.605.10 8 449 7.5E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 SUPERFAMILY SSF53720 3 450 1.31E-123 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 485 4.2E-230 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 Gene3D G3DSA:3.40.309.10 248 437 7.5E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 Pfam PF00171 Aldehyde dehydrogenase family 10 459 2.2E-121 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 486 57.047 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VV1_1315 0562a9e363b46bee40d9c68fac364623 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 SUPERFAMILY SSF52540 73 358 1.78E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.6E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 Pfam PF00271 Helicase conserved C-terminal domain 232 338 5.9E-26 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 SMART SM00487 20 221 5.1E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 Gene3D G3DSA:3.40.50.300 212 373 3.1E-44 T 14-10-2018 VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 Gene3D G3DSA:3.40.50.300 1 210 1.5E-75 T 14-10-2018 VV2_0968 a7f0eba01ea8a60f7f06eecb75a4a209 398 SMART SM00490 257 338 1.6E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2843 a2545256e908cd58d0d9d361877b933e 233 Gene3D G3DSA:3.30.70.580 62 228 4.0E-57 T 14-10-2018 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 SUPERFAMILY SSF55120 60 228 4.0E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 SUPERFAMILY SSF55174 1 56 1.15E-11 T 14-10-2018 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 2.9E-49 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 SMART SM00363 1 59 2.4E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 Pfam PF01479 S4 domain 1 44 2.7E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 Gene3D G3DSA:3.10.290.10 1 61 2.2E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 2.7E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_2843 a2545256e908cd58d0d9d361877b933e 233 Gene3D G3DSA:3.30.70.1560 127 210 4.0E-57 T 14-10-2018 VV1_1115 cd1d33a529ccb3837dca586275e76bad 141 PIRSF PIRSF006276 1 141 4.4E-53 T 14-10-2018 IPR006015 Universal stress protein A VV1_1115 cd1d33a529ccb3837dca586275e76bad 141 Pfam PF00582 Universal stress protein family 3 138 1.5E-21 T 14-10-2018 IPR006016 UspA VV1_1115 cd1d33a529ccb3837dca586275e76bad 141 Gene3D G3DSA:3.40.50.620 2 141 6.3E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1115 cd1d33a529ccb3837dca586275e76bad 141 SUPERFAMILY SSF52402 3 138 4.19E-33 T 14-10-2018 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 PIRSF PIRSF009393 1 726 4.0E-287 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 1.3E-186 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 SUPERFAMILY SSF55904 578 725 6.28E-44 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 Gene3D G3DSA:3.90.100.10 608 726 6.6E-41 T 14-10-2018 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 2.4E-46 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 SUPERFAMILY SSF52172 1 116 5.47E-25 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 SUPERFAMILY SSF53383 117 574 6.38E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 111 4.7E-13 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 Gene3D G3DSA:3.40.50.220 21 116 1.6E-12 T 14-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 Gene3D G3DSA:3.90.1150.10 429 607 1.6E-67 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 14-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 Gene3D G3DSA:3.40.640.10 117 427 1.2E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1235 e4b15e0bf52b0a45609213ad03f9e775 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VV1_0655 cb75571e04f96ba147cc8a6fc77c44a2 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 1.8E-136 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VV1_0655 cb75571e04f96ba147cc8a6fc77c44a2 363 Gene3D G3DSA:3.40.718.10 1 363 1.5E-156 T 14-10-2018 VV1_0655 cb75571e04f96ba147cc8a6fc77c44a2 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 1.4E-163 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VV1_0655 cb75571e04f96ba147cc8a6fc77c44a2 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 50.98 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VV1_0655 cb75571e04f96ba147cc8a6fc77c44a2 363 SMART SM01329 7 356 3.0E-202 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VV1_0655 cb75571e04f96ba147cc8a6fc77c44a2 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VV1_0655 cb75571e04f96ba147cc8a6fc77c44a2 363 SUPERFAMILY SSF53659 4 360 3.84E-123 T 14-10-2018 VV1_1957 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Gene3D G3DSA:3.40.50.300 1 254 8.0E-67 T 14-10-2018 VV1_1957 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 SUPERFAMILY SSF52540 1 252 6.69E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1957 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 Pfam PF13614 AAA domain 4 177 8.1E-50 T 14-10-2018 IPR025669 AAA domain VV1_1957 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PIRSF PIRSF009320 1 81 1.8E-13 T 14-10-2018 VV1_1957 bd7eccb2f0e8e993b44d8fcd5d86bcfd 258 PIRSF PIRSF009320 96 239 1.6E-7 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SMART SM00278 447 466 100.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SMART SM00278 545 564 5.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SMART SM00278 481 500 6.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Pfam PF12826 Helix-hairpin-helix motif 511 574 7.3E-24 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Gene3D G3DSA:3.40.50.10190 586 669 4.6E-25 T 14-10-2018 IPR036420 BRCT domain superfamily VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SMART SM00532 4 449 2.3E-274 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 3.1E-11 T 14-10-2018 IPR001357 BRCT domain VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 PIRSF PIRSF001604 1 669 1.7E-251 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Gene3D G3DSA:1.10.150.20 433 506 1.1E-28 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 8.2E-132 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Gene3D G3DSA:2.40.50.140 319 391 2.1E-34 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SUPERFAMILY SSF47781 404 584 5.19E-61 T 14-10-2018 IPR010994 RuvA domain 2-like VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 2.4E-262 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 1.6E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Gene3D G3DSA:1.10.150.20 507 585 1.8E-29 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SUPERFAMILY SSF52113 596 668 4.86E-17 T 14-10-2018 IPR036420 BRCT domain superfamily VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Pfam PF14520 Helix-hairpin-helix domain 447 501 1.1E-5 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Gene3D G3DSA:3.30.470.90 70 318 1.0E-100 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Gene3D G3DSA:2.20.70.80 392 432 1.6E-18 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 1.1E-35 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SMART SM00292 595 669 4.3E-9 T 14-10-2018 IPR001357 BRCT domain VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SUPERFAMILY SSF56091 5 317 1.76E-122 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Gene3D G3DSA:1.10.287.610 3 69 1.7E-26 T 14-10-2018 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.383 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VV1_0206 898a879d5cdebb7c219ca8920fce8d7e 669 SUPERFAMILY SSF50249 319 401 4.11E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 3.0E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 3.0E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.0E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 SUPERFAMILY SSF50891 1 162 1.61E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 Gene3D G3DSA:2.40.100.10 1 164 1.0E-66 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 PIRSF PIRSF001467 1 163 1.3E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VV1_2909 4759d460a66fd16cfd0d38f7748c4949 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 4.8E-49 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 Gene3D G3DSA:1.10.340.30 21 132 1.1E-79 T 14-10-2018 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 SMART SM00478 38 185 1.0E-57 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 Gene3D G3DSA:1.10.1670.10 11 203 1.1E-79 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.495 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.6E-90 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 PIRSF PIRSF001435 1 211 1.7E-52 T 14-10-2018 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.4E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 SUPERFAMILY SSF48150 2 207 1.88E-72 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.5E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VV1_3099 c5c7060fd952e6670fdbf53e7e947f4d 213 SMART SM00525 186 206 4.4E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VV1_2048 c5cabaf9d1159da34cab764a7cea4125 440 Pfam PF00589 Phage integrase family 226 366 2.9E-13 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_2048 c5cabaf9d1159da34cab764a7cea4125 440 Pfam PF13356 Arm DNA-binding domain 2 92 1.9E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VV1_2048 c5cabaf9d1159da34cab764a7cea4125 440 SUPERFAMILY SSF56349 109 405 7.95E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_2048 c5cabaf9d1159da34cab764a7cea4125 440 Gene3D G3DSA:3.30.160.390 1 112 1.0E-17 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VV1_2048 c5cabaf9d1159da34cab764a7cea4125 440 Gene3D G3DSA:1.10.443.10 218 399 8.1E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_3153 912fc10c2edb82d39a029e8821fa6116 361 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 2.4E-40 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VV1_3153 912fc10c2edb82d39a029e8821fa6116 361 Gene3D G3DSA:3.40.50.1100 25 324 1.4E-67 T 14-10-2018 VV1_3153 912fc10c2edb82d39a029e8821fa6116 361 Gene3D G3DSA:3.40.50.1100 51 157 1.4E-67 T 14-10-2018 VV1_3153 912fc10c2edb82d39a029e8821fa6116 361 SUPERFAMILY SSF53686 23 335 5.5E-70 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV2_0830 42435b402324159d7d77c31430e1bb75 1022 ProSitePatterns PS00012 Phosphopantetheine attachment site. 481 496 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VV2_0830 42435b402324159d7d77c31430e1bb75 1022 SUPERFAMILY SSF52777 744 1002 5.56E-30 T 14-10-2018 VV2_0830 42435b402324159d7d77c31430e1bb75 1022 SUPERFAMILY SSF47336 452 520 1.44E-11 T 14-10-2018 IPR036736 ACP-like superfamily VV2_0830 42435b402324159d7d77c31430e1bb75 1022 SUPERFAMILY SSF52777 556 756 1.11E-32 T 14-10-2018 VV2_0830 42435b402324159d7d77c31430e1bb75 1022 Gene3D G3DSA:3.30.559.30 742 989 2.8E-63 T 14-10-2018 VV2_0830 42435b402324159d7d77c31430e1bb75 1022 SUPERFAMILY SSF52777 29 177 9.78E-14 T 14-10-2018 VV2_0830 42435b402324159d7d77c31430e1bb75 1022 Gene3D G3DSA:1.10.1200.10 441 529 4.6E-15 T 14-10-2018 IPR036736 ACP-like superfamily VV2_0830 42435b402324159d7d77c31430e1bb75 1022 Gene3D G3DSA:3.30.559.10 559 939 2.8E-63 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV2_0830 42435b402324159d7d77c31430e1bb75 1022 Pfam PF00550 Phosphopantetheine attachment site 469 520 9.9E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VV2_0830 42435b402324159d7d77c31430e1bb75 1022 Gene3D G3DSA:3.30.559.10 19 193 1.9E-9 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV2_0830 42435b402324159d7d77c31430e1bb75 1022 SMART SM00823 Phosphopantetheine attachment site 454 526 0.0051 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 VV2_0830 42435b402324159d7d77c31430e1bb75 1022 Pfam PF00668 Condensation domain 557 999 3.9E-43 T 14-10-2018 IPR001242 Condensation domain VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 14-10-2018 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 PIRSF PIRSF004557 10 442 1.4E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 Pfam PF00344 SecY translocase 76 418 5.6E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 Gene3D G3DSA:1.10.3370.10 10 430 1.9E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 SUPERFAMILY SSF103491 15 425 7.06E-131 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.188 T 14-10-2018 IPR026593 Protein translocase subunit SecY VV1_0740 bdad69aaaab1403a5c9fcb34ac7b740f 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.7E-134 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 Gene3D G3DSA:3.40.50.300 266 498 2.4E-47 T 14-10-2018 VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 Gene3D G3DSA:3.40.50.300 1 239 1.2E-56 T 14-10-2018 VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 SUPERFAMILY SSF52540 5 224 5.22E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 SMART SM00382 30 225 6.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 SMART SM00382 278 472 3.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 Pfam PF00005 ABC transporter 270 423 2.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 Pfam PF00005 ABC transporter 21 170 6.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0062 8262dbda83b31efecec7f36b856a1a99 501 SUPERFAMILY SSF52540 269 475 3.59E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF52418 73 334 2.75E-89 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.254 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 PIRSF PIRSF000478 1 439 9.1E-149 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:1.20.970.10 7 195 1.3E-127 T 14-10-2018 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF47648 2 70 4.32E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 SUPERFAMILY SSF54680 337 437 8.89E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.5E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.90.1170.30 337 431 1.7E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 9.0E-49 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 4.8E-213 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 SMART SM00941 350 424 2.8E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 3.4E-159 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 Gene3D G3DSA:3.40.1030.10 70 322 1.3E-127 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1726 b68c07a7fcba3eaf00811e4dc83d9a98 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 8.8E-24 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV2_0169 9558607ba21fbaddec795786e389259c 495 Pfam PF07690 Major Facilitator Superfamily 17 408 3.1E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0169 9558607ba21fbaddec795786e389259c 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 487 2.1E-109 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 VV2_0169 9558607ba21fbaddec795786e389259c 495 SUPERFAMILY SSF103473 10 490 3.92E-61 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0169 9558607ba21fbaddec795786e389259c 495 Gene3D G3DSA:1.20.1720.10 14 198 1.2E-46 T 14-10-2018 VV2_0169 9558607ba21fbaddec795786e389259c 495 Gene3D G3DSA:1.20.1250.20 258 437 1.9E-14 T 14-10-2018 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 Gene3D G3DSA:1.10.287.950 218 540 1.1E-64 T 14-10-2018 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 Gene3D G3DSA:3.30.450.20 33 186 1.2E-30 T 14-10-2018 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 SMART SM00283 277 538 5.4E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 SUPERFAMILY SSF58104 243 539 7.98E-70 T 14-10-2018 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 SMART SM01049 30 124 2.1E-19 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 Pfam PF17200 Single Cache domain 2 36 185 7.1E-34 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 6.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 6.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 6.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 6.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1511 1d84690304341e196e9d7957b8f4de02 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 503 5.7E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Gene3D G3DSA:3.40.50.150 488 706 1.2E-74 T 14-10-2018 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Gene3D G3DSA:3.30.750.80 396 487 7.3E-36 T 14-10-2018 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Gene3D G3DSA:3.30.2130.30 6 255 7.1E-136 T 14-10-2018 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 14-10-2018 IPR000241 Putative RNA methylase domain VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 SMART SM00981 56 154 3.3E-20 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Pfam PF02926 THUMP domain 32 153 7.4E-12 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 PIRSF PIRSF037618 1 707 1.1E-297 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Gene3D G3DSA:3.40.50.150 169 371 7.1E-136 T 14-10-2018 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.4E-61 T 14-10-2018 IPR000241 Putative RNA methylase domain VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 434 667 2.1E-26 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.545 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 SUPERFAMILY SSF53335 139 371 3.54E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_2635 a0ac20435d256fb69df8feb4d3bcaf8d 707 SUPERFAMILY SSF53335 399 706 6.2E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2365 3a35a674758ed9040f961ae699031e3a 263 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 82 1.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_2365 3a35a674758ed9040f961ae699031e3a 263 SUPERFAMILY SSF46689 29 87 2.0E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2365 3a35a674758ed9040f961ae699031e3a 263 Gene3D G3DSA:1.10.357.10 29 213 1.2E-12 T 14-10-2018 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54980 401 478 8.99E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.0E-29 T 14-10-2018 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF50447 261 399 5.52E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 1.6E-297 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54980 600 689 2.34E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 3.7E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF54211 476 596 1.09E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.6E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 3.5E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.70.240 601 671 2.1E-84 T 14-10-2018 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF03764 Elongation factor G, domain IV 476 594 4.1E-44 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.40.50.300 1 290 3.9E-101 T 14-10-2018 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.70.870 430 480 2.0E-20 T 14-10-2018 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 103.583 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 SMART SM00889 477 595 1.2E-62 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 SUPERFAMILY SSF52540 3 278 1.11E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 SMART SM00838 597 684 2.2E-46 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:2.40.30.10 293 413 5.0E-43 T 14-10-2018 VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Gene3D G3DSA:3.30.230.10 481 684 2.1E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_1737 dd1704f40460a019941edac47c9dbd3f 695 Pfam PF00679 Elongation factor G C-terminus 597 683 2.0E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 Gene3D G3DSA:1.10.260.40 1 59 7.9E-21 T 14-10-2018 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 Gene3D G3DSA:3.40.50.2300 160 289 3.0E-68 T 14-10-2018 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.7E-33 T 14-10-2018 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 SUPERFAMILY SSF47413 1 59 9.38E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 SUPERFAMILY SSF53822 61 333 3.34E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 Gene3D G3DSA:3.40.50.2300 60 304 3.0E-68 T 14-10-2018 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1323 9156430bbfff1229f6507f0c7d3ee822 335 SMART SM00354 1 71 5.4E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0360 6f9509437901677c84439336d1c1563a 212 SUPERFAMILY SSF74653 124 202 5.1E-24 T 14-10-2018 VV2_0360 6f9509437901677c84439336d1c1563a 212 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 133 209 6.5E-22 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VV2_0360 6f9509437901677c84439336d1c1563a 212 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 134 209 6.5E-19 T 14-10-2018 IPR006260 TonB/TolA, C-terminal VV2_0360 6f9509437901677c84439336d1c1563a 212 Gene3D G3DSA:3.30.1150.10 108 211 1.3E-26 T 14-10-2018 VV2_0360 6f9509437901677c84439336d1c1563a 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 60 70 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VV2_0360 6f9509437901677c84439336d1c1563a 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 148 166 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VV2_0360 6f9509437901677c84439336d1c1563a 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 127 148 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VV2_0360 6f9509437901677c84439336d1c1563a 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 167 184 2.4E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VV1_1384 33448f3b122032ca1a76530ad268a199 498 Pfam PF13401 AAA domain 29 130 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1384 33448f3b122032ca1a76530ad268a199 498 Pfam PF05036 Sporulation related domain 411 484 3.6E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VV1_1384 33448f3b122032ca1a76530ad268a199 498 Gene3D G3DSA:3.40.50.300 11 161 5.2E-7 T 14-10-2018 VV1_1384 33448f3b122032ca1a76530ad268a199 498 Gene3D G3DSA:3.30.70.1070 400 495 2.6E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV1_1384 33448f3b122032ca1a76530ad268a199 498 SUPERFAMILY SSF52540 15 224 6.75E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0856 31dab334a20b8860dc8c84688a006b15 522 Gene3D G3DSA:3.40.50.300 2 270 7.3E-46 T 14-10-2018 VV2_0856 31dab334a20b8860dc8c84688a006b15 522 SUPERFAMILY SSF52540 3 234 1.63E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0856 31dab334a20b8860dc8c84688a006b15 522 Gene3D G3DSA:3.40.50.300 293 520 4.3E-34 T 14-10-2018 VV2_0856 31dab334a20b8860dc8c84688a006b15 522 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0856 31dab334a20b8860dc8c84688a006b15 522 SUPERFAMILY SSF52540 353 512 3.42E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0856 31dab334a20b8860dc8c84688a006b15 522 SMART SM00382 360 522 0.004 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0856 31dab334a20b8860dc8c84688a006b15 522 SMART SM00382 28 213 4.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0856 31dab334a20b8860dc8c84688a006b15 522 Pfam PF00005 ABC transporter 22 169 2.7E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0856 31dab334a20b8860dc8c84688a006b15 522 Pfam PF00005 ABC transporter 353 480 1.4E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 Gene3D G3DSA:2.40.10.10 33 277 1.4E-69 T 14-10-2018 VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 522 541 7.4E-4 T 14-10-2018 IPR020008 GlyGly-CTERM domain VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 SMART SM00020 40 272 1.2E-76 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 SUPERFAMILY SSF50494 9 277 1.13E-71 T 14-10-2018 IPR009003 Peptidase S1, PA clan VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 223 234 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 129 143 2.0E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 72 87 2.0E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 222 234 2.0E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 82 87 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 Gene3D G3DSA:2.60.40.10 278 376 2.2E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2387 fbd7bad9a93d4573cf4871f32b814156 542 Pfam PF00089 Trypsin 41 272 4.2E-59 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV2_0363 e3c85a8a46c1af3a48dbdd71ff9e7061 455 PIRSF PIRSF037714 2 452 8.9E-160 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VV2_0363 e3c85a8a46c1af3a48dbdd71ff9e7061 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 322 426 1.0E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VV2_0132 66fd76ff02c37dca483289f6a565185c 207 Gene3D G3DSA:1.10.760.10 30 115 1.3E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0132 66fd76ff02c37dca483289f6a565185c 207 PIRSF PIRSF000005 4 207 2.4E-32 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VV2_0132 66fd76ff02c37dca483289f6a565185c 207 Gene3D G3DSA:1.10.760.10 119 206 3.0E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0132 66fd76ff02c37dca483289f6a565185c 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 30 111 7.0E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0132 66fd76ff02c37dca483289f6a565185c 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 128 202 9.4E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0132 66fd76ff02c37dca483289f6a565185c 207 SUPERFAMILY SSF46626 24 114 3.72E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0132 66fd76ff02c37dca483289f6a565185c 207 SUPERFAMILY SSF46626 122 206 4.58E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_3024 1dc1eef9eb73a5f596bc1960eba18350 702 Pfam PF05170 AsmA family 1 593 1.5E-122 T 14-10-2018 IPR007844 AsmA VV2_0768 ef9edbdea1079ceeebb66db37ce8fa0c 418 Gene3D G3DSA:3.90.170.10 266 418 4.1E-51 T 14-10-2018 VV2_0768 ef9edbdea1079ceeebb66db37ce8fa0c 418 Gene3D G3DSA:1.10.300.10 99 200 1.9E-72 T 14-10-2018 VV2_0768 ef9edbdea1079ceeebb66db37ce8fa0c 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 9.6E-132 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV2_0768 ef9edbdea1079ceeebb66db37ce8fa0c 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 142.052 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV2_0768 ef9edbdea1079ceeebb66db37ce8fa0c 418 SUPERFAMILY SSF52540 1 417 4.04E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0768 ef9edbdea1079ceeebb66db37ce8fa0c 418 SMART SM00788 3 417 1.0E-176 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV2_0768 ef9edbdea1079ceeebb66db37ce8fa0c 418 Gene3D G3DSA:3.40.440.10 6 255 1.9E-72 T 14-10-2018 VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 SUPERFAMILY SSF89360 16 112 2.75E-22 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 Gene3D G3DSA:3.30.300.130 116 204 3.8E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 193 2.0E-28 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 114 1.4E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 Gene3D G3DSA:2.60.300.12 15 113 1.0E-13 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 SUPERFAMILY SSF117916 110 199 6.98E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 Pfam PF01106 NifU-like domain 126 192 6.0E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 17 207 2.7E-95 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VV1_0864 1028a2059532b700d5850ac6d2f8db91 207 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 207 44.072 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VV1_1528 8316d03d12650647b032e2f7b9aac5e4 140 SUPERFAMILY SSF53098 3 136 3.19E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_1528 8316d03d12650647b032e2f7b9aac5e4 140 SMART SM00732 3 104 5.9E-35 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VV1_1528 8316d03d12650647b032e2f7b9aac5e4 140 Pfam PF03652 Holliday junction resolvase 4 136 4.7E-36 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VV1_1528 8316d03d12650647b032e2f7b9aac5e4 140 Gene3D G3DSA:3.30.420.140 1 138 2.5E-39 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VV1_1528 8316d03d12650647b032e2f7b9aac5e4 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.45 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VV1_1528 8316d03d12650647b032e2f7b9aac5e4 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 3.5E-49 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VV2_0520 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 SMART SM01322 1 174 8.3E-96 T 14-10-2018 IPR009822 YaeQ VV2_0520 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 Gene3D G3DSA:3.10.640.10 1 177 2.7E-63 T 14-10-2018 IPR038590 YaeQ superfamily VV2_0520 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 SUPERFAMILY SSF52980 2 178 8.31E-62 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VV2_0520 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 PIRSF PIRSF011484 1 179 1.8E-61 T 14-10-2018 IPR009822 YaeQ VV2_0520 9e616b2b6fdb76b4c6cfdda96a8ec0c6 179 Pfam PF07152 YaeQ protein 1 170 9.2E-65 T 14-10-2018 IPR009822 YaeQ VV2_1465 0d8e43fa02271f765724612d048da242 296 Gene3D G3DSA:3.40.190.10 102 289 9.2E-34 T 14-10-2018 VV2_1465 0d8e43fa02271f765724612d048da242 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1465 0d8e43fa02271f765724612d048da242 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1465 0d8e43fa02271f765724612d048da242 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1465 0d8e43fa02271f765724612d048da242 296 Gene3D G3DSA:3.40.190.10 163 262 9.2E-34 T 14-10-2018 VV2_1465 0d8e43fa02271f765724612d048da242 296 SUPERFAMILY SSF46785 6 113 7.07E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1465 0d8e43fa02271f765724612d048da242 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1465 0d8e43fa02271f765724612d048da242 296 Pfam PF03466 LysR substrate binding domain 93 291 4.8E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1465 0d8e43fa02271f765724612d048da242 296 SUPERFAMILY SSF53850 93 292 1.54E-27 T 14-10-2018 VV2_1465 0d8e43fa02271f765724612d048da242 296 Gene3D G3DSA:1.10.10.10 5 91 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2337 2d7286018fb21ff27c109a1c14607043 246 SUPERFAMILY SSF48452 27 193 8.34E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2337 2d7286018fb21ff27c109a1c14607043 246 Gene3D G3DSA:1.25.40.10 19 94 5.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2337 2d7286018fb21ff27c109a1c14607043 246 SMART SM00028 28 61 3.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2337 2d7286018fb21ff27c109a1c14607043 246 SMART SM00028 131 164 0.048 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2337 2d7286018fb21ff27c109a1c14607043 246 SMART SM00028 97 130 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2337 2d7286018fb21ff27c109a1c14607043 246 Pfam PF14559 Tetratricopeptide repeat 42 98 4.8E-6 T 14-10-2018 VV1_2337 2d7286018fb21ff27c109a1c14607043 246 Pfam PF14559 Tetratricopeptide repeat 143 196 1.2E-6 T 14-10-2018 VV1_2337 2d7286018fb21ff27c109a1c14607043 246 Gene3D G3DSA:1.25.40.10 95 246 4.5E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 Gene3D G3DSA:3.30.565.10 278 439 9.0E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 3.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 SUPERFAMILY SSF47384 199 280 2.55E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 Gene3D G3DSA:1.10.287.130 180 277 3.9E-26 T 14-10-2018 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 SMART SM00387 326 437 9.5E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 SUPERFAMILY SSF55874 268 436 4.98E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 SMART SM00388 214 279 1.4E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 Gene3D G3DSA:3.40.50.2300 440 572 1.1E-38 T 14-10-2018 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 SMART SM00448 456 569 2.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 Pfam PF00072 Response regulator receiver domain 458 570 3.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 6.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 1.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2622 802c9f379c085c9b9df016137a8a1ed6 574 SUPERFAMILY SSF52172 456 573 1.18E-35 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1095 77760ea00c9be2a97524cf207ce46f7a 444 SUPERFAMILY SSF56112 72 273 1.48E-51 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV1_1095 77760ea00c9be2a97524cf207ce46f7a 444 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 197 209 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VV1_1095 77760ea00c9be2a97524cf207ce46f7a 444 SMART SM00220 78 325 1.1E-26 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV1_1095 77760ea00c9be2a97524cf207ce46f7a 444 Gene3D G3DSA:1.10.510.10 162 324 3.5E-27 T 14-10-2018 VV1_1095 77760ea00c9be2a97524cf207ce46f7a 444 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 84 109 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 VV1_1095 77760ea00c9be2a97524cf207ce46f7a 444 Gene3D G3DSA:3.30.200.20 69 158 3.5E-20 T 14-10-2018 VV1_1095 77760ea00c9be2a97524cf207ce46f7a 444 Pfam PF00069 Protein kinase domain 78 272 1.4E-37 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 Pfam PF00563 EAL domain 420 655 2.4E-74 T 14-10-2018 IPR001633 EAL domain VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 1.8E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 SUPERFAMILY SSF55073 247 404 8.63E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 SMART SM00267 231 402 2.6E-62 T 14-10-2018 IPR000160 GGDEF domain VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 3.6E-46 T 14-10-2018 IPR000160 GGDEF domain VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 SUPERFAMILY SSF141868 418 668 2.48E-89 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 Gene3D G3DSA:3.30.70.270 236 414 2.2E-58 T 14-10-2018 VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 SMART SM00052 412 660 7.2E-107 T 14-10-2018 IPR001633 EAL domain VV1_1719 e1cb512dc7e22137d702acf3f3e0cbe7 687 Gene3D G3DSA:3.20.20.450 415 682 1.2E-96 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1361 662f868f481482e60d11f7bfb415bd86 826 Gene3D G3DSA:2.60.40.10 202 294 2.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1361 662f868f481482e60d11f7bfb415bd86 826 SUPERFAMILY SSF49303 659 729 8.78E-5 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VV2_1361 662f868f481482e60d11f7bfb415bd86 826 Pfam PF00703 Glycosyl hydrolases family 2 204 298 4.4E-7 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1361 662f868f481482e60d11f7bfb415bd86 826 Gene3D G3DSA:3.20.20.80 295 641 7.9E-124 T 14-10-2018 VV2_1361 662f868f481482e60d11f7bfb415bd86 826 SUPERFAMILY SSF49785 16 203 1.41E-45 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1361 662f868f481482e60d11f7bfb415bd86 826 SUPERFAMILY SSF51445 295 643 3.02E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1361 662f868f481482e60d11f7bfb415bd86 826 SUPERFAMILY SSF49303 206 297 7.48E-16 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VV2_1361 662f868f481482e60d11f7bfb415bd86 826 SUPERFAMILY SSF49303 756 819 1.44E-7 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VV2_1361 662f868f481482e60d11f7bfb415bd86 826 Gene3D G3DSA:2.60.120.260 14 201 7.5E-46 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_0099 1a87c88131d13e1cc937bb563ba2e885 308 Gene3D G3DSA:3.60.10.10 87 308 4.3E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV2_0099 1a87c88131d13e1cc937bb563ba2e885 308 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 93 298 1.0E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV2_0099 1a87c88131d13e1cc937bb563ba2e885 308 SUPERFAMILY SSF56219 86 306 5.89E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 SUPERFAMILY SSF51246 331 444 9.94E-44 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 SMART SM00878 336 441 6.3E-65 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.5E-243 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 Gene3D G3DSA:3.30.1490.20 131 203 2.4E-156 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 Gene3D G3DSA:3.30.470.20 86 433 2.4E-156 T 14-10-2018 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 SUPERFAMILY SSF56059 83 346 9.9E-70 T 14-10-2018 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 Gene3D G3DSA:3.40.50.20 1 85 5.7E-34 T 14-10-2018 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 SUPERFAMILY SSF52440 1 113 4.6E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.9E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VV1_1234 86c0f566d08f35c10d9213dbb913a6b8 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.4E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 SMART SM00387 426 536 1.7E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 SUPERFAMILY SSF47384 297 378 5.69E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 Gene3D G3DSA:3.30.565.10 391 537 5.4E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 SUPERFAMILY SSF55874 370 538 8.25E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 533 1.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 SMART SM00304 261 313 1.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 SMART SM00388 314 380 8.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 376 6.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2008 4b23c7754e2874fe7499269efb7fcc65 544 Gene3D G3DSA:1.10.287.130 265 380 1.9E-22 T 14-10-2018 VV1_1712 0d7ed629a8639a95fe4b15b753ad471e 301 Pfam PF01136 Peptidase family U32 91 245 1.0E-11 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VV1_2359 f81a40cdeecfac48e86aa7b9e43d7f66 278 Pfam PF08668 HDOD domain 15 206 1.9E-55 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VV1_2359 f81a40cdeecfac48e86aa7b9e43d7f66 278 SUPERFAMILY SSF109604 8 231 1.7E-56 T 14-10-2018 VV1_2359 f81a40cdeecfac48e86aa7b9e43d7f66 278 Gene3D G3DSA:1.10.3210.10 3 276 3.4E-69 T 14-10-2018 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 Pfam PF08245 Mur ligase middle domain 54 193 2.6E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 PIRSF PIRSF001563 6 421 9.5E-105 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 SUPERFAMILY SSF53244 287 415 6.72E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 SUPERFAMILY SSF53623 15 285 3.4E-85 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 Gene3D G3DSA:3.40.1190.10 1 287 2.6E-90 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 7.3E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 Gene3D G3DSA:3.90.190.20 288 421 1.2E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VV1_1994 bb5ad401a9e9983104e96307967045b7 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 33 414 7.5E-105 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VV1_2348 88a6cf898a677ad8faced8bb59d58e4e 153 Pfam PF02566 OsmC-like protein 55 152 2.8E-16 T 14-10-2018 IPR003718 OsmC/Ohr family VV1_2348 88a6cf898a677ad8faced8bb59d58e4e 153 SUPERFAMILY SSF82784 1 152 3.01E-50 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VV1_2348 88a6cf898a677ad8faced8bb59d58e4e 153 Gene3D G3DSA:3.30.300.20 1 153 1.1E-51 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV1_0517 79e4114eb2485ab03389755fb2f461e7 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VV1_0517 79e4114eb2485ab03389755fb2f461e7 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.225 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VV1_0517 79e4114eb2485ab03389755fb2f461e7 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 2.4E-92 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VV1_0517 79e4114eb2485ab03389755fb2f461e7 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 2.5E-83 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.988 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.1E-41 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 SUPERFAMILY SSF52954 463 570 1.39E-33 T 14-10-2018 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 5.4E-245 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 Gene3D G3DSA:3.90.960.10 240 389 2.8E-234 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 SUPERFAMILY SSF55826 218 390 1.02E-30 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 Pfam PF03129 Anticodon binding domain 475 568 3.4E-22 T 14-10-2018 IPR004154 Anticodon-binding VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 Gene3D G3DSA:3.30.930.10 11 465 2.8E-234 T 14-10-2018 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 Gene3D G3DSA:3.40.50.800 4 554 2.8E-234 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 PIRSF PIRSF001535 1 571 2.6E-266 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 SUPERFAMILY SSF55681 10 478 5.72E-97 T 14-10-2018 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 2.3E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VV1_1838 a5fda81c0ea4f07002340c8071de6d19 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VV1_0006 cd12afcd0a858dcaea617f56dc389eb6 360 Pfam PF01594 AI-2E family transporter 22 349 9.7E-21 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VV1_2606 41a69f6adc423d65f6db37209c46eece 262 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 120 256 2.9E-17 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VV1_2606 41a69f6adc423d65f6db37209c46eece 262 Gene3D G3DSA:1.10.530.10 116 258 1.2E-13 T 14-10-2018 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 2.4E-46 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 7 625 47.987 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 Gene3D G3DSA:3.40.710.10 254 627 1.4E-87 T 14-10-2018 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 621 3.5E-222 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 Gene3D G3DSA:3.90.1310.10 65 250 3.2E-46 T 14-10-2018 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 618 1.8E-69 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 Gene3D G3DSA:3.30.1390.30 86 161 3.2E-46 T 14-10-2018 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 SUPERFAMILY SSF56519 57 253 1.44E-50 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VV2_1370 d57b220df02bf94fe8df49ffa410dfb2 629 SUPERFAMILY SSF56601 255 624 7.77E-89 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.5E-9 T 14-10-2018 IPR003004 GspF/PilC family VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.0E-27 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.3E-30 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 Gene3D G3DSA:1.20.81.30 59 176 2.6E-32 T 14-10-2018 VV1_1440 3972164dab5104d9f288daf2d9932dc6 406 Gene3D G3DSA:1.20.81.30 257 370 1.3E-28 T 14-10-2018 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 3.4E-20 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 3.0E-47 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 5.1E-33 T 14-10-2018 IPR001453 MoaB/Mog domain VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 Pfam PF00994 Probable molybdopterin binding domain 187 320 2.0E-25 T 14-10-2018 IPR001453 MoaB/Mog domain VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 Gene3D G3DSA:2.40.340.10 332 401 2.1E-145 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 SUPERFAMILY SSF63867 332 410 1.03E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 Gene3D G3DSA:3.90.105.10 31 178 2.1E-145 T 14-10-2018 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 Gene3D G3DSA:3.40.980.10 179 331 2.1E-145 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 Gene3D G3DSA:2.170.190.11 53 145 2.1E-145 T 14-10-2018 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 SUPERFAMILY SSF63882 7 180 3.4E-57 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 SMART SM00852 184 321 1.5E-41 T 14-10-2018 IPR001453 MoaB/Mog domain VV2_0544 3ce65d253501efbbbce413dcc527cee7 411 SUPERFAMILY SSF53218 181 326 1.05E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV2_0782 23e9c648c5c3282cfee79169555a2973 341 Gene3D G3DSA:1.10.10.60 237 339 5.9E-18 T 14-10-2018 VV2_0782 23e9c648c5c3282cfee79169555a2973 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 4.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0782 23e9c648c5c3282cfee79169555a2973 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 4.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0782 23e9c648c5c3282cfee79169555a2973 341 SUPERFAMILY SSF46689 292 338 1.65E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0782 23e9c648c5c3282cfee79169555a2973 341 Pfam PF12833 Helix-turn-helix domain 260 336 2.4E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0782 23e9c648c5c3282cfee79169555a2973 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 35 200 5.8E-11 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VV2_0782 23e9c648c5c3282cfee79169555a2973 341 SMART SM00342 253 334 1.8E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Pfam PF00085 Thioredoxin 7 109 3.1E-13 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Gene3D G3DSA:1.25.40.10 112 196 1.6E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Gene3D G3DSA:3.40.30.10 2 111 2.1E-21 T 14-10-2018 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 SUPERFAMILY SSF48452 115 246 9.87E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Pfam PF14559 Tetratricopeptide repeat 125 190 1.2E-11 T 14-10-2018 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Gene3D G3DSA:1.25.40.10 197 284 1.4E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.1E-26 T 14-10-2018 VV1_0201 330e9e2fbaedf3244fcb68b37c2d1c8f 284 SUPERFAMILY SSF52833 4 111 4.62E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_0296 f82bc4e42a29dd319471bcb3eaf895af 181 Gene3D G3DSA:3.40.1580.20 1 181 1.5E-67 T 14-10-2018 IPR038228 Syd superfamily VV1_0296 f82bc4e42a29dd319471bcb3eaf895af 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.171 T 14-10-2018 IPR009948 Syd GO:0009898 VV1_0296 f82bc4e42a29dd319471bcb3eaf895af 181 Pfam PF07348 Syd protein (SUKH-2) 8 179 1.8E-68 T 14-10-2018 IPR009948 Syd GO:0009898 VV1_3012 51f9cb7216cc3e1518213e8917c610cf 341 SUPERFAMILY SSF53659 4 336 2.88E-102 T 14-10-2018 VV1_3012 51f9cb7216cc3e1518213e8917c610cf 341 Pfam PF02504 Fatty acid synthesis protein 5 327 2.1E-98 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VV1_3012 51f9cb7216cc3e1518213e8917c610cf 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 1.7E-104 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VV1_3012 51f9cb7216cc3e1518213e8917c610cf 341 Gene3D G3DSA:3.40.718.10 2 340 2.5E-119 T 14-10-2018 VV1_3012 51f9cb7216cc3e1518213e8917c610cf 341 PIRSF PIRSF002465 2 339 4.0E-124 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VV1_3012 51f9cb7216cc3e1518213e8917c610cf 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 136.245 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VV1_2192 93fbefdef7db7b06bb468efad5453281 123 Pfam PF13453 Transcription factor zinc-finger 2 39 1.3E-10 T 14-10-2018 IPR027392 Transcription factor zinc-finger VV1_0570 c1826fcdbf939b92cffd13fb32b7f079 152 Pfam PF05258 Protein of unknown function (DUF721) 11 90 1.9E-10 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 VV1_1289 79ef5a0042818d44b1f273c73cb3121d 373 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 2.0E-151 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VV1_1289 79ef5a0042818d44b1f273c73cb3121d 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_1289 79ef5a0042818d44b1f273c73cb3121d 373 SUPERFAMILY SSF54862 165 316 1.0E-18 T 14-10-2018 VV1_1289 79ef5a0042818d44b1f273c73cb3121d 373 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 49.817 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VV1_1289 79ef5a0042818d44b1f273c73cb3121d 373 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 8.4E-25 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VV1_1289 79ef5a0042818d44b1f273c73cb3121d 373 Pfam PF13484 4Fe-4S double cluster binding domain 189 252 2.2E-19 T 14-10-2018 VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 SMART SM00267 521 698 4.2E-47 T 14-10-2018 IPR000160 GGDEF domain VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 Gene3D G3DSA:3.30.70.270 517 700 2.8E-46 T 14-10-2018 VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 694 4.2E-36 T 14-10-2018 IPR000160 GGDEF domain VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 SUPERFAMILY SSF55073 537 699 6.2E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 Gene3D G3DSA:3.30.450.40 171 344 5.3E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 696 1.5E-39 T 14-10-2018 IPR000160 GGDEF domain VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 SUPERFAMILY SSF55781 178 332 3.49E-7 T 14-10-2018 VV2_1560 977566b9f56a944c0ac01cf3862a373f 706 SUPERFAMILY SSF55781 341 511 5.45E-7 T 14-10-2018 VV2_1222 6f0633ba04b05ee4e7eac073c28bba9c 398 Gene3D G3DSA:3.30.70.270 186 373 5.6E-48 T 14-10-2018 VV2_1222 6f0633ba04b05ee4e7eac073c28bba9c 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 361 3.6E-40 T 14-10-2018 IPR000160 GGDEF domain VV2_1222 6f0633ba04b05ee4e7eac073c28bba9c 398 SMART SM00267 180 362 4.9E-48 T 14-10-2018 IPR000160 GGDEF domain VV2_1222 6f0633ba04b05ee4e7eac073c28bba9c 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 2.1E-39 T 14-10-2018 IPR000160 GGDEF domain VV2_1222 6f0633ba04b05ee4e7eac073c28bba9c 398 SUPERFAMILY SSF55073 196 363 5.89E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2977 03c4c2bcb0d0281692a063ca07a1451a 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 6.0E-57 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_2977 03c4c2bcb0d0281692a063ca07a1451a 232 Gene3D G3DSA:3.20.20.70 2 232 2.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2977 03c4c2bcb0d0281692a063ca07a1451a 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.5E-51 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_2977 03c4c2bcb0d0281692a063ca07a1451a 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_2977 03c4c2bcb0d0281692a063ca07a1451a 232 SUPERFAMILY SSF51366 1 228 5.65E-76 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV1_2977 03c4c2bcb0d0281692a063ca07a1451a 232 SMART SM00934 5 226 3.2E-100 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_2977 03c4c2bcb0d0281692a063ca07a1451a 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.442 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_3013 af56a5ec7b286a77c066be53ae815faa 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.0E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_3013 af56a5ec7b286a77c066be53ae815faa 56 SUPERFAMILY SSF57829 2 55 1.16E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VV1_3013 af56a5ec7b286a77c066be53ae815faa 56 Pfam PF01783 Ribosomal L32p protein family 2 56 2.4E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_3013 af56a5ec7b286a77c066be53ae815faa 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.755 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:3.50.50.60 296 431 1.3E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:3.40.50.740 778 1240 9.3E-179 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:2.20.25.90 715 770 3.6E-20 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 SUPERFAMILY SSF46548 89 200 2.3E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.6E-16 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.6E-16 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 PRINTS PR00419 Adrenodoxin reductase family signature 257 267 1.6E-16 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.6E-16 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:3.30.70.20 614 704 7.2E-19 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 1.7E-11 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:3.40.50.720 186 295 7.4E-20 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:3.10.20.740 1 123 1.4E-25 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Pfam PF01568 Molydopterin dinucleotide binding domain 1282 1386 4.0E-30 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 175 8.5E-18 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:2.40.40.20 1272 1393 3.2E-42 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 720 1390 3.3E-246 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 SUPERFAMILY SSF50692 1250 1392 1.81E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 SUPERFAMILY SSF54862 566 706 1.67E-21 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 191 488 8.8E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1145 1162 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 716 769 7.8E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 686 697 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 SUPERFAMILY SSF51971 190 430 1.06E-62 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Pfam PF12838 4Fe-4S dicluster domain 634 700 9.9E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 SUPERFAMILY SSF53706 711 1247 1.3E-203 T 14-10-2018 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 SMART SM00926 715 770 1.2E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Pfam PF00384 Molybdopterin oxidoreductase 773 1199 1.5E-88 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 SUPERFAMILY SSF54292 1 98 5.06E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 720 737 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VV2_1360 2c68c5c0c0193269ae01020b1d242030 1399 Gene3D G3DSA:3.40.228.10 851 1052 9.3E-179 T 14-10-2018 VV1_1037 4a3091395cfc103f7a1a5176d8b4f996 328 SUPERFAMILY SSF56112 6 328 1.46E-89 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV1_1037 4a3091395cfc103f7a1a5176d8b4f996 328 Gene3D G3DSA:1.10.510.10 60 258 2.9E-123 T 14-10-2018 VV1_1037 4a3091395cfc103f7a1a5176d8b4f996 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.38 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VV1_1037 4a3091395cfc103f7a1a5176d8b4f996 328 Pfam PF01636 Phosphotransferase enzyme family 34 253 5.3E-44 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VV1_1037 4a3091395cfc103f7a1a5176d8b4f996 328 Gene3D G3DSA:1.20.1270.170 149 307 2.9E-123 T 14-10-2018 VV1_1037 4a3091395cfc103f7a1a5176d8b4f996 328 Gene3D G3DSA:3.30.200.70 13 108 2.9E-123 T 14-10-2018 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 331 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 349 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 Pfam PF00989 PAS fold 10 111 2.9E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 Gene3D G3DSA:3.30.565.10 193 350 4.9E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0891 413aeea58c00fec64071f83d780b5e05 350 SUPERFAMILY SSF55785 10 103 5.9E-9 T 14-10-2018 IPR035965 PAS domain superfamily VV1_0891 413aeea58c00fec64071f83d780b5e05 350 SMART SM00387 235 350 7.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0891 413aeea58c00fec64071f83d780b5e05 350 Gene3D G3DSA:1.10.287.130 115 192 1.2E-13 T 14-10-2018 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 122 7.8E-6 T 14-10-2018 IPR000014 PAS domain VV1_0891 413aeea58c00fec64071f83d780b5e05 350 SMART SM00091 6 74 8.9E-8 T 14-10-2018 IPR000014 PAS domain VV1_0891 413aeea58c00fec64071f83d780b5e05 350 SMART SM00388 131 196 2.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 SUPERFAMILY SSF47384 127 192 1.67E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 349 2.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0891 413aeea58c00fec64071f83d780b5e05 350 SUPERFAMILY SSF55874 198 349 4.32E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0891 413aeea58c00fec64071f83d780b5e05 350 Gene3D G3DSA:3.30.450.20 2 114 2.0E-27 T 14-10-2018 VV1_0891 413aeea58c00fec64071f83d780b5e05 350 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 191 2.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1376 12a54c2f560da06b61a21701e681cb3b 226 SUPERFAMILY SSF51206 18 142 4.45E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV2_1376 12a54c2f560da06b61a21701e681cb3b 226 Gene3D G3DSA:2.60.120.10 18 145 1.5E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1376 12a54c2f560da06b61a21701e681cb3b 226 Pfam PF00027 Cyclic nucleotide-binding domain 36 112 6.1E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_0598 b6f736e2b46edfae7540d6397f46b3a5 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.3E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VV1_0598 b6f736e2b46edfae7540d6397f46b3a5 130 SUPERFAMILY SSF54211 5 130 7.97E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0598 b6f736e2b46edfae7540d6397f46b3a5 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.501 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VV1_0598 b6f736e2b46edfae7540d6397f46b3a5 130 Gene3D G3DSA:3.30.230.10 1 130 6.7E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_0598 b6f736e2b46edfae7540d6397f46b3a5 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 SUPERFAMILY SSF53335 117 402 8.86E-66 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 Pfam PF01189 16S rRNA methyltransferase RsmB/F 219 384 1.6E-43 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 384 401 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 5.4E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV2_1139 06fd8ff27fc97085a5acbf35d5694f78 404 Gene3D G3DSA:3.40.50.150 126 401 8.1E-75 T 14-10-2018 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.5E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 2.1E-192 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 Gene3D G3DSA:3.40.440.10 6 249 2.5E-107 T 14-10-2018 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 218.736 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 Gene3D G3DSA:3.90.170.10 267 438 5.6E-67 T 14-10-2018 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 Gene3D G3DSA:1.10.300.10 102 201 2.5E-107 T 14-10-2018 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 SUPERFAMILY SSF52540 3 436 9.77E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 SMART SM00788 4 431 0.0 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV1_1299 69da8293c2717f9ed84fcc44d47e3c85 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 SMART SM00437 284 563 1.0E-87 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 Gene3D G3DSA:1.10.290.10 293 422 1.0E-164 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 Pfam PF01131 DNA topoisomerase 159 597 3.2E-114 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 SUPERFAMILY SSF56712 3 612 1.11E-185 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 Gene3D G3DSA:2.70.20.10 218 493 1.0E-164 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 SMART SM00493 2 125 1.8E-27 T 14-10-2018 IPR006171 TOPRIM domain VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 639 1.5E-235 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 652 65.205 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 Gene3D G3DSA:1.10.460.10 163 607 1.0E-164 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 SMART SM00436 129 224 1.5E-32 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 Gene3D G3DSA:3.40.50.140 2 157 1.0E-61 T 14-10-2018 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 Pfam PF01751 Toprim domain 4 134 6.5E-17 T 14-10-2018 IPR006171 TOPRIM domain VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV1_3130 858dd1120ed45bf0229fa430b8f53044 656 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 2.6E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 Pfam PF03466 LysR substrate binding domain 87 302 5.6E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 SUPERFAMILY SSF53850 90 302 1.49E-16 T 14-10-2018 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 3.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 3.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 5.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 Gene3D G3DSA:3.40.190.10 166 271 1.5E-12 T 14-10-2018 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 SUPERFAMILY SSF46785 4 86 1.75E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 Gene3D G3DSA:3.40.190.10 92 165 1.5E-12 T 14-10-2018 VV2_0257 cde073aabbc82fa4aeb2f6a2b34bc770 304 Gene3D G3DSA:1.10.10.10 2 83 4.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 SUPERFAMILY SSF46785 10 159 6.66E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 SMART SM00347 43 146 1.6E-25 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 Pfam PF01047 MarR family 51 111 9.8E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 Gene3D G3DSA:1.10.10.10 1 161 4.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 2.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 2.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 2.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0325 21e22c1a7cb93fb1e190cf078daf329d 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 2.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_1003 9bad9ac9f94b31c45f5aed14dbd888b0 204 SMART SM00479 6 173 1.8E-42 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV2_1003 9bad9ac9f94b31c45f5aed14dbd888b0 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 180 1.2E-28 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV2_1003 9bad9ac9f94b31c45f5aed14dbd888b0 204 Gene3D G3DSA:3.30.420.10 2 175 1.3E-48 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV2_1003 9bad9ac9f94b31c45f5aed14dbd888b0 204 SUPERFAMILY SSF53098 4 176 4.64E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_1003 9bad9ac9f94b31c45f5aed14dbd888b0 204 Pfam PF00929 Exonuclease 8 163 1.5E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_1765 936434c9ba5ae617d65693463758eb89 477 Gene3D G3DSA:1.20.1740.10 5 471 3.0E-8 T 14-10-2018 VV1_1765 936434c9ba5ae617d65693463758eb89 477 PIRSF PIRSF006060 1 475 3.4E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV1_1765 936434c9ba5ae617d65693463758eb89 477 Pfam PF13520 Amino acid permease 11 439 1.3E-30 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV2_1042 e04a7867ed4036476fa007153dc46db5 661 SMART SM00283 399 660 2.9E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1042 e04a7867ed4036476fa007153dc46db5 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 444 627 1.4E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1042 e04a7867ed4036476fa007153dc46db5 661 Gene3D G3DSA:1.10.287.950 331 661 3.1E-69 T 14-10-2018 VV2_1042 e04a7867ed4036476fa007153dc46db5 661 SUPERFAMILY SSF58104 352 661 3.92E-72 T 14-10-2018 VV2_1042 e04a7867ed4036476fa007153dc46db5 661 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 133 1.7E-13 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VV1_0832 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF54211 1 181 8.6E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0832 658e75b1198924c353e4bff213d5d76c 238 SUPERFAMILY SSF55666 153 236 1.14E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_0832 658e75b1198924c353e4bff213d5d76c 238 Gene3D G3DSA:3.30.230.70 13 238 2.1E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_0832 658e75b1198924c353e4bff213d5d76c 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 7.0E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_0832 658e75b1198924c353e4bff213d5d76c 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.006 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VV1_0832 658e75b1198924c353e4bff213d5d76c 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 9.6E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_0832 658e75b1198924c353e4bff213d5d76c 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site VV1_0832 658e75b1198924c353e4bff213d5d76c 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.8E-111 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 SUPERFAMILY SSF46785 9 85 1.36E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 62 2.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 Gene3D G3DSA:3.40.190.10 92 287 2.4E-38 T 14-10-2018 VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 SUPERFAMILY SSF53850 90 292 1.99E-27 T 14-10-2018 VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 Gene3D G3DSA:1.10.10.10 4 91 2.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 Pfam PF03466 LysR substrate binding domain 90 289 9.3E-26 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0587 53aba5ea2b69ebafd00e76c8e07271da 295 Gene3D G3DSA:3.40.190.10 164 261 2.4E-38 T 14-10-2018 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 7.6E-20 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 PIRSF PIRSF000190 1 211 1.4E-81 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Gene3D G3DSA:2.30.110.10 13 211 2.2E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 SUPERFAMILY SSF50475 11 211 5.24E-66 T 14-10-2018 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 5.5E-90 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 2.9E-24 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_1122 334bb3c5c33c81e37f5c19fe1e8dbc84 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.895 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_1642 a9881264a6f5cf2957d7377bb83839df 365 Pfam PF12060 Domain of unknown function (DUF3541) 30 252 8.3E-117 T 14-10-2018 IPR021928 Protein of unknown function DUF3541 VV2_1457 698dc3b32422134696491e4e35728f7e 318 SUPERFAMILY SSF56327 144 309 1.87E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 2 142 6.7E-31 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 PIRSF PIRSF000102 1 318 2.0E-90 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 311 4.4E-23 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 SUPERFAMILY SSF51735 3 145 2.1E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1457 698dc3b32422134696491e4e35728f7e 318 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 1.3E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.3E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 1.3E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.3E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.3E-20 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 Gene3D G3DSA:3.90.110.10 146 315 1.4E-45 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV2_1457 698dc3b32422134696491e4e35728f7e 318 Gene3D G3DSA:3.40.50.720 1 145 1.1E-38 T 14-10-2018 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 2.0E-10 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF51344 5 87 2.62E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 3.4E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 SUPERFAMILY SSF46604 89 138 2.28E-13 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:1.20.5.440 92 135 6.4E-18 T 14-10-2018 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 Gene3D G3DSA:2.60.15.10 4 91 8.5E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 4.0E-40 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.511 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1022 f50477ca2a47fd6b4f70fa3c99c223dd 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.6E-43 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV2_0934 9d20d4640b932593a6b1837285bd404d 268 Gene3D G3DSA:1.10.10.60 162 266 1.2E-23 T 14-10-2018 VV2_0934 9d20d4640b932593a6b1837285bd404d 268 SUPERFAMILY SSF46689 216 264 5.73E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0934 9d20d4640b932593a6b1837285bd404d 268 Pfam PF12833 Helix-turn-helix domain 188 264 2.7E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0934 9d20d4640b932593a6b1837285bd404d 268 SMART SM00342 181 263 3.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_0909 41c80f1048dbf1dfb2635d000dd2a34b 260 SUPERFAMILY SSF53335 27 258 2.01E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0909 41c80f1048dbf1dfb2635d000dd2a34b 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 259 1.1E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VV1_0909 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VV1_0909 41c80f1048dbf1dfb2635d000dd2a34b 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VV1_0909 41c80f1048dbf1dfb2635d000dd2a34b 260 Gene3D G3DSA:3.40.50.150 40 260 7.5E-75 T 14-10-2018 VV1_0909 41c80f1048dbf1dfb2635d000dd2a34b 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.268 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VV1_0909 41c80f1048dbf1dfb2635d000dd2a34b 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 1.5E-82 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 Pfam PF03466 LysR substrate binding domain 89 293 2.9E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:3.40.190.10 93 290 6.0E-72 T 14-10-2018 VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:1.10.10.10 1 92 3.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 SUPERFAMILY SSF46785 1 112 5.9E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 Gene3D G3DSA:3.40.190.10 163 267 6.0E-72 T 14-10-2018 VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2218 e5245aaa05521e51688bfbb34f9f680a 303 SUPERFAMILY SSF53850 89 296 2.85E-40 T 14-10-2018 VV1_2930 e85ae860d03883086253b0275327d133 171 Pfam PF16036 Chalcone isomerase-like 33 168 5.2E-8 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 VV1_0091 276e3f211de089cea6c5538a34fd2105 386 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 114 273 4.4E-9 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain VV2_1603 6eca526206eadde1f567faa1c05daab7 367 Pfam PF01553 Acyltransferase 92 240 5.7E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV2_1603 6eca526206eadde1f567faa1c05daab7 367 SUPERFAMILY SSF69593 85 297 1.44E-8 T 14-10-2018 VV2_0175 a2306508b25165ac28d61a0cee8b4275 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 2.2E-30 T 14-10-2018 IPR032036 Protein of unknown function DUF5062 VV2_0175 a2306508b25165ac28d61a0cee8b4275 86 Gene3D G3DSA:1.20.120.1930 1 86 2.1E-39 T 14-10-2018 VV1_0956 164a765c6efbf604568160922d919318 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 345 2.3E-67 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VV1_0956 164a765c6efbf604568160922d919318 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VV1_0956 164a765c6efbf604568160922d919318 386 Pfam PF07690 Major Facilitator Superfamily 5 341 6.2E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_0956 164a765c6efbf604568160922d919318 386 Gene3D G3DSA:1.20.1720.10 1 373 4.6E-89 T 14-10-2018 VV1_0956 164a765c6efbf604568160922d919318 386 SUPERFAMILY SSF103473 2 371 1.96E-58 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_0432 5017ee312314c6bf12eaf22320a284f6 64 SUPERFAMILY SSF140319 1 63 4.05E-27 T 14-10-2018 IPR036762 IscX-like superfamily VV1_0432 5017ee312314c6bf12eaf22320a284f6 64 Gene3D G3DSA:1.10.10.600 1 64 7.8E-28 T 14-10-2018 IPR036762 IscX-like superfamily VV1_0432 5017ee312314c6bf12eaf22320a284f6 64 PIRSF PIRSF039003 1 64 5.4E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV1_0432 5017ee312314c6bf12eaf22320a284f6 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 1.6E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV1_0432 5017ee312314c6bf12eaf22320a284f6 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 1.3E-32 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 3.4E-69 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 Gene3D G3DSA:3.40.50.150 7 239 2.6E-83 T 14-10-2018 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 PIRSF PIRSF000398 1 275 9.9E-72 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 SUPERFAMILY SSF53335 5 268 2.77E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 Gene3D G3DSA:1.10.1020.10 57 156 2.6E-83 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 8.7E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV1_1385 eecf4f1a2b70710ecde9f2a18ef792c3 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 5.5E-94 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VV1_1764 4a2a9af40287b2cacb2fbf137b03b3b1 478 PIRSF PIRSF006060 1 475 3.7E-40 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV1_1764 4a2a9af40287b2cacb2fbf137b03b3b1 478 Pfam PF13520 Amino acid permease 11 442 1.7E-29 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV1_1764 4a2a9af40287b2cacb2fbf137b03b3b1 478 Gene3D G3DSA:1.20.1740.10 14 475 3.1E-7 T 14-10-2018 VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 Gene3D G3DSA:3.30.70.330 479 548 9.9E-11 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 550 41.641 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 Pfam PF00270 DEAD/DEAH box helicase 30 195 1.1E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 SUPERFAMILY SSF52540 74 361 3.86E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 SMART SM00487 25 223 2.6E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 SMART SM00490 259 340 2.2E-34 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 Pfam PF03880 DbpA RNA binding domain 478 545 9.6E-17 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 Gene3D G3DSA:3.40.50.300 1 211 2.1E-73 T 14-10-2018 VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV2_0147 0b3a93f25c0c983ad285136763d0e369 641 Gene3D G3DSA:3.40.50.300 215 434 3.6E-52 T 14-10-2018 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:1.20.1090.10 643 864 6.9E-60 T 14-10-2018 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 SUPERFAMILY SSF56796 452 863 7.33E-115 T 14-10-2018 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:3.40.309.10 217 400 1.7E-171 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 SUPERFAMILY SSF53720 5 454 1.01E-84 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.8E-25 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:3.40.605.10 15 216 1.7E-171 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:3.40.50.1970 456 642 1.6E-58 T 14-10-2018 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 Gene3D G3DSA:3.40.605.10 401 455 1.7E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_3111 608892b03e04bedaf0936def6fbaf6b2 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 850 5.2E-113 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:2.60.120.10 43 164 8.3E-49 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00100 30 151 2.4E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 Gene3D G3DSA:1.10.10.10 165 247 3.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF46785 165 244 2.93E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 SUPERFAMILY SSF51206 23 162 2.36E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.4E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_2610 18a9677a861c5351ed77f5a56f17bae6 248 SMART SM00419 187 235 4.3E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 6.6E-227 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 4.4E-78 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 SUPERFAMILY SSF53649 4 509 9.16E-76 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 Gene3D G3DSA:3.40.1450.10 78 310 9.4E-208 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 Gene3D G3DSA:3.40.720.10 6 509 9.4E-208 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 PIRSF PIRSF001492 1 510 7.7E-202 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.4E-80 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 SUPERFAMILY SSF64158 78 308 8.5E-80 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV1_1281 72b44ae36232e0068b57d1c38e024739 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.104 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 Gene3D G3DSA:3.20.20.70 276 592 1.1E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 Pfam PF02065 Melibiase 255 594 4.7E-120 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PIRSF PIRSF005536 1 704 5.1E-232 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 Gene3D G3DSA:2.70.98.60 1 275 1.8E-50 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 Gene3D G3DSA:2.60.40.1180 593 704 1.6E-5 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 374 396 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 324 339 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 432 447 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 207 222 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 296 310 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 258 278 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 505 521 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 PRINTS PR00743 Glycosyl hydrolase family 36 signature 480 496 5.0E-57 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 ProSitePatterns PS00512 Alpha-galactosidase signature. 325 340 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 611 692 2.3E-9 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 SUPERFAMILY SSF51445 291 623 3.83E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1330 4094b18fea21bf44f8a9c963585395e5 706 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 25 237 1.3E-42 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV2_0245 686a2b981d424c10eb72f9104fb26ee6 185 Pfam PF03831 PhnA domain 119 184 1.4E-22 T 14-10-2018 IPR013988 PhnA protein, C-terminal VV2_0245 686a2b981d424c10eb72f9104fb26ee6 185 SUPERFAMILY SSF82057 117 184 2.56E-20 T 14-10-2018 VV2_0245 686a2b981d424c10eb72f9104fb26ee6 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 1.5E-10 T 14-10-2018 IPR013987 PhnA protein, N-terminal VV2_0245 686a2b981d424c10eb72f9104fb26ee6 185 Gene3D G3DSA:2.30.30.40 114 185 3.3E-24 T 14-10-2018 VV2_0245 686a2b981d424c10eb72f9104fb26ee6 185 SMART SM00782 6 52 2.4E-27 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VV1_0705 38fa1b4044f426c6cefe3b8c60a43a57 214 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 10 203 7.2E-57 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VV1_0705 38fa1b4044f426c6cefe3b8c60a43a57 214 SUPERFAMILY SSF52507 8 204 7.59E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VV1_0705 38fa1b4044f426c6cefe3b8c60a43a57 214 Pfam PF02441 Flavoprotein 8 184 1.7E-24 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VV1_0705 38fa1b4044f426c6cefe3b8c60a43a57 214 Gene3D G3DSA:3.40.50.1950 2 206 8.6E-77 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VV1_0705 38fa1b4044f426c6cefe3b8c60a43a57 214 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 8 205 34.806 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VV2_0392 c6d2b9f33c0b4bfa2d1647505d60aaf1 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 303 1.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_0392 c6d2b9f33c0b4bfa2d1647505d60aaf1 322 Gene3D G3DSA:1.10.3720.10 105 307 4.5E-20 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0392 c6d2b9f33c0b4bfa2d1647505d60aaf1 322 SUPERFAMILY SSF161098 106 304 3.66E-24 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2782 52316f0fcaddfcd8f4cc956b2685a08f 331 Gene3D G3DSA:1.10.3470.10 4 328 1.7E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV1_2782 52316f0fcaddfcd8f4cc956b2685a08f 331 Pfam PF01032 FecCD transport family 20 326 9.9E-83 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VV1_2782 52316f0fcaddfcd8f4cc956b2685a08f 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.139 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VV1_2782 52316f0fcaddfcd8f4cc956b2685a08f 331 SUPERFAMILY SSF81345 7 326 1.44E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1037 0e39e98464513cf66cb5bd9f691e65f7 151 SUPERFAMILY SSF51316 22 148 1.31E-51 T 14-10-2018 IPR011057 Mss4-like superfamily VV2_1037 0e39e98464513cf66cb5bd9f691e65f7 151 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 149 6.2E-49 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV2_1037 0e39e98464513cf66cb5bd9f691e65f7 151 Gene3D G3DSA:2.170.150.20 6 150 3.6E-52 T 14-10-2018 VV2_1037 0e39e98464513cf66cb5bd9f691e65f7 151 Pfam PF01641 SelR domain 28 144 6.9E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV2_1644 c86227729b5687ceede643d3b291adf4 459 SMART SM00267 283 458 1.1E-47 T 14-10-2018 IPR000160 GGDEF domain VV2_1644 c86227729b5687ceede643d3b291adf4 459 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 453 1.1E-43 T 14-10-2018 IPR000160 GGDEF domain VV2_1644 c86227729b5687ceede643d3b291adf4 459 Pfam PF03924 CHASE domain 109 221 9.0E-13 T 14-10-2018 IPR006189 CHASE domain VV2_1644 c86227729b5687ceede643d3b291adf4 459 SUPERFAMILY SSF55073 299 455 4.47E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1644 c86227729b5687ceede643d3b291adf4 459 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 454 2.6E-44 T 14-10-2018 IPR000160 GGDEF domain VV2_1644 c86227729b5687ceede643d3b291adf4 459 SMART SM01079 47 223 1.6E-28 T 14-10-2018 IPR006189 CHASE domain VV2_1644 c86227729b5687ceede643d3b291adf4 459 Gene3D G3DSA:3.30.70.270 290 458 9.1E-52 T 14-10-2018 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 Gene3D G3DSA:2.60.120.10 313 394 3.1E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PIRSF PIRSF001480 8 402 5.5E-101 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 Gene3D G3DSA:1.10.441.10 159 312 3.1E-128 T 14-10-2018 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 SUPERFAMILY SSF51182 9 393 1.34E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 394 6.5E-93 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 Gene3D G3DSA:2.60.120.10 16 287 3.1E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 2.0E-67 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_0515 ed5b801df1ea7a937ed5332cd7d89acd 402 Pfam PF01238 Phosphomannose isomerase type I 12 366 2.2E-82 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0629 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 Gene3D G3DSA:1.20.5.1030 67 123 5.1E-17 T 14-10-2018 IPR038379 SecE superfamily VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 6.2E-42 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 1.5E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 3.2E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VV1_1205 114de7c9edc3e7d440f0c1d6396f4ca9 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.517 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VV2_0447 fe54da16cd1fc3eb5fb47560c9227b11 205 Gene3D G3DSA:1.20.1050.10 83 199 2.9E-31 T 14-10-2018 VV2_0447 fe54da16cd1fc3eb5fb47560c9227b11 205 Gene3D G3DSA:3.40.30.10 1 77 3.4E-23 T 14-10-2018 VV2_0447 fe54da16cd1fc3eb5fb47560c9227b11 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 4.8E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV2_0447 fe54da16cd1fc3eb5fb47560c9227b11 205 SUPERFAMILY SSF52833 1 88 2.24E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0447 fe54da16cd1fc3eb5fb47560c9227b11 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 199 1.9E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VV2_0447 fe54da16cd1fc3eb5fb47560c9227b11 205 SUPERFAMILY SSF47616 83 203 1.21E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 454 1.8E-149 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 SUPERFAMILY SSF100950 63 294 6.7E-39 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 Pfam PF11870 Domain of unknown function (DUF3390) 384 471 5.7E-28 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 Gene3D G3DSA:1.10.1060.10 290 393 5.2E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 SUPERFAMILY SSF46548 285 388 5.58E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 Pfam PF13183 4Fe-4S dicluster domain 310 376 2.6E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 Gene3D G3DSA:3.40.50.10420 129 289 3.6E-13 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VV2_0799 29fa901ceb216da47c3518ae2966dbb7 476 Pfam PF02589 LUD domain 68 293 2.2E-52 T 14-10-2018 IPR003741 LUD domain VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 SUPERFAMILY SSF143990 18 162 1.57E-51 T 14-10-2018 IPR037238 YbiA-like superfamily VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 21 160 2.5E-34 T 14-10-2018 IPR012816 NADAR VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 PIRSF PIRSF001259 21 164 0.004 T 14-10-2018 VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 PIRSF PIRSF001259 153 367 4.9E-93 T 14-10-2018 VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 Gene3D G3DSA:3.40.50.10990 168 339 3.2E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 173 359 5.5E-81 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 167 362 44.339 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 Pfam PF08719 Domain of unknown function (DUF1768) 22 161 2.9E-36 T 14-10-2018 IPR012816 NADAR VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 Pfam PF00925 GTP cyclohydrolase II 174 336 6.6E-66 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 SUPERFAMILY SSF142695 168 338 1.07E-63 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV2_1180 b0e421f5c1ccb6c178333a8f64296006 367 Gene3D G3DSA:1.10.357.40 9 167 9.7E-56 T 14-10-2018 IPR037238 YbiA-like superfamily VV1_0781 516bd342e3ff06c9d6a35657f5078f94 727 Pfam PF02706 Chain length determinant protein 19 112 7.6E-20 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VV1_0781 516bd342e3ff06c9d6a35657f5078f94 727 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 514 717 1.6E-51 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VV1_0781 516bd342e3ff06c9d6a35657f5078f94 727 Gene3D G3DSA:3.40.50.300 449 726 5.8E-78 T 14-10-2018 VV1_0781 516bd342e3ff06c9d6a35657f5078f94 727 SUPERFAMILY SSF52540 528 721 8.83E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0781 516bd342e3ff06c9d6a35657f5078f94 727 Pfam PF13614 AAA domain 543 656 3.4E-11 T 14-10-2018 IPR025669 AAA domain VV1_0781 516bd342e3ff06c9d6a35657f5078f94 727 Pfam PF13807 G-rich domain on putative tyrosine kinase 375 455 1.2E-34 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 SMART SM00490 505 589 6.5E-23 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 SUPERFAMILY SSF52540 198 453 1.3E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 2.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 SMART SM00487 265 459 2.5E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 SUPERFAMILY SSF50249 9 174 1.22E-39 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 Gene3D G3DSA:3.40.50.300 209 450 8.7E-82 T 14-10-2018 VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 Gene3D G3DSA:3.40.50.300 457 630 2.8E-54 T 14-10-2018 VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 SUPERFAMILY SSF52540 292 653 2.42E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 Gene3D G3DSA:2.40.50.140 47 139 1.3E-12 T 14-10-2018 VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 665 2.0E-234 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 Pfam PF17191 RecG wedge domain 14 172 6.1E-21 T 14-10-2018 IPR033454 RecG, wedge domain VV1_0854 88e04dc2e5aabebe6f536dd9172bff72 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.4E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1054 ecb4533e264a69459dbe56c332d952a1 161 PIRSF PIRSF001338 1 160 1.1E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VV1_1054 ecb4533e264a69459dbe56c332d952a1 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.541 T 14-10-2018 IPR033747 Class I PurE VV1_1054 ecb4533e264a69459dbe56c332d952a1 161 SUPERFAMILY SSF52255 2 158 1.07E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VV1_1054 ecb4533e264a69459dbe56c332d952a1 161 SMART SM01001 1 152 3.1E-104 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VV1_1054 ecb4533e264a69459dbe56c332d952a1 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 7.9E-68 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VV1_1054 ecb4533e264a69459dbe56c332d952a1 161 Gene3D G3DSA:3.40.50.7700 1 161 3.9E-73 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VV1_1054 ecb4533e264a69459dbe56c332d952a1 161 Pfam PF00731 AIR carboxylase 2 150 5.2E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 Gene3D G3DSA:3.40.50.720 1 185 1.1E-63 T 14-10-2018 VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 182 1.1E-50 T 14-10-2018 VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 79 107 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 111 2.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 80 2.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 19 30 2.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 SUPERFAMILY SSF51735 1 184 3.58E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 111 4.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 166 4.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 130 4.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 30 4.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 82 4.5E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0742 6fb4d7b51e1fcf311994bc53bb7824f2 185 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 1 184 7.2E-95 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 VV1_0498 4804a36412e04339d19fb2ac5b6f48d6 598 SUPERFAMILY SSF51735 399 493 1.58E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0498 4804a36412e04339d19fb2ac5b6f48d6 598 Pfam PF00999 Sodium/hydrogen exchanger family 18 386 5.2E-34 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV1_0498 4804a36412e04339d19fb2ac5b6f48d6 598 Gene3D G3DSA:3.40.50.720 397 500 2.0E-10 T 14-10-2018 VV1_0498 4804a36412e04339d19fb2ac5b6f48d6 598 Gene3D G3DSA:1.20.1530.20 6 388 3.1E-16 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VV1_0498 4804a36412e04339d19fb2ac5b6f48d6 598 Pfam PF02254 TrkA-N domain 399 491 2.1E-7 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 SUPERFAMILY SSF52172 397 526 2.99E-6 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 SMART SM00448 1 118 2.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 Pfam PF00072 Response regulator receiver domain 3 118 1.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 Gene3D G3DSA:1.10.10.10 519 587 5.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 Gene3D G3DSA:3.40.50.2300 1 131 6.9E-29 T 14-10-2018 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 Pfam PF00563 EAL domain 140 370 9.6E-65 T 14-10-2018 IPR001633 EAL domain VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 SUPERFAMILY SSF52172 1 133 1.42E-26 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 Pfam PF00196 Bacterial regulatory proteins, luxR family 530 584 7.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 SMART SM00052 134 375 1.5E-67 T 14-10-2018 IPR001633 EAL domain VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 SUPERFAMILY SSF46894 522 585 1.26E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 561 573 1.7E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 545 561 1.7E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 531 545 1.7E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 SUPERFAMILY SSF141868 141 384 2.48E-71 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 ProSitePatterns PS00622 LuxR-type HTH domain signature. 545 572 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 Gene3D G3DSA:3.40.50.2300 394 512 1.7E-5 T 14-10-2018 VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 Gene3D G3DSA:3.20.20.450 139 385 9.2E-73 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0138 32b72df256266fd1c3f1cb2d7bbefe6e 588 SMART SM00421 528 585 2.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2691 0c01913e921ace6a2f9b8978f1cf9edd 381 Pfam PF12698 ABC-2 family transporter protein 22 366 2.3E-38 T 14-10-2018 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:3.90.1110.10 158 276 7.4E-28 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.8E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:2.40.50.100 714 788 3.1E-31 T 14-10-2018 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:2.40.270.10 1035 1241 2.0E-88 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.7E-24 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 14-10-2018 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 4.6E-157 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:3.90.1110.10 300 438 1.2E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:3.90.1100.10 647 713 2.1E-21 T 14-10-2018 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:3.90.1100.10 439 617 2.9E-65 T 14-10-2018 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:3.90.1100.10 19 157 3.3E-48 T 14-10-2018 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.293 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 14-10-2018 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 231 1.1E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_1211 0bb20c9bd7922b3d10380fdffdd7e904 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 7.4E-17 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV2_1308 432518db040884a7bc99242ec781ccf1 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 287 1.2E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV2_1308 432518db040884a7bc99242ec781ccf1 369 SUPERFAMILY SSF111369 57 179 1.57E-11 T 14-10-2018 VV2_1308 432518db040884a7bc99242ec781ccf1 369 Gene3D G3DSA:2.40.50.100 58 248 7.6E-43 T 14-10-2018 VV2_1308 432518db040884a7bc99242ec781ccf1 369 Gene3D G3DSA:1.10.287.470 91 213 7.6E-43 T 14-10-2018 VV2_1308 432518db040884a7bc99242ec781ccf1 369 SUPERFAMILY SSF111369 201 284 3.01E-5 T 14-10-2018 VV2_1308 432518db040884a7bc99242ec781ccf1 369 Gene3D G3DSA:2.40.30.170 249 325 7.6E-43 T 14-10-2018 VV2_1308 432518db040884a7bc99242ec781ccf1 369 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 317 1.5E-6 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV1_1011 bac15505f79bee19563dd39dfaa0c3e4 211 Gene3D G3DSA:3.40.50.150 4 210 6.9E-69 T 14-10-2018 VV1_1011 bac15505f79bee19563dd39dfaa0c3e4 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.0E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV1_1011 bac15505f79bee19563dd39dfaa0c3e4 211 PIRSF PIRSF003078 1 211 4.7E-60 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV1_1011 bac15505f79bee19563dd39dfaa0c3e4 211 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 3.8E-64 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV1_1011 bac15505f79bee19563dd39dfaa0c3e4 211 SUPERFAMILY SSF53335 7 209 9.73E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1011 bac15505f79bee19563dd39dfaa0c3e4 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.83 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 2.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF47384 774 854 2.75E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF12860 PAS fold 634 748 3.9E-44 T 14-10-2018 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:1.20.1730.10 33 510 7.4E-9 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF55874 843 1002 1.31E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:3.30.450.20 616 749 5.1E-12 T 14-10-2018 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 8.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:1.10.287.130 750 851 8.0E-15 T 14-10-2018 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:3.40.50.2300 1022 1143 1.1E-18 T 14-10-2018 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 SMART SM00448 1026 1139 7.3E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 SMART SM00387 897 1006 4.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF52172 1025 1142 9.11E-20 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 SMART SM00388 788 853 1.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Gene3D G3DSA:3.30.565.10 859 1011 1.8E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 SUPERFAMILY SSF55785 626 741 2.3E-9 T 14-10-2018 IPR035965 PAS domain superfamily VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 1.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1242 a970d8522bbdc93bcf8bac088bd832af 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 9.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 Gene3D G3DSA:3.20.20.80 213 611 7.5E-162 T 14-10-2018 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 122 196 2.0E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 SUPERFAMILY SSF81296 128 182 1.4E-7 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 Pfam PF00128 Alpha amylase, catalytic domain 264 338 2.4E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 SUPERFAMILY SSF81296 11 94 1.04E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 105 711 2.6E-246 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 SUPERFAMILY SSF51445 175 605 4.22E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 80 715 41.126 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 SUPERFAMILY SSF51011 612 714 7.44E-26 T 14-10-2018 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 PIRSF PIRSF000463 1 715 7.3E-279 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 Gene3D G3DSA:2.60.40.1180 612 714 1.3E-28 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 SMART SM00642 239 606 2.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 Gene3D G3DSA:2.60.40.10 1 209 6.4E-51 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1252 fe8f8bdeaedc33256d483a0f2face949 715 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 617 714 5.2E-16 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 Pfam PF00512 His Kinase A (phospho-acceptor) domain 567 631 8.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 SMART SM00387 676 787 1.2E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 SMART SM00304 346 398 0.0015 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 Gene3D G3DSA:3.30.450.20 392 524 3.7E-7 T 14-10-2018 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 SUPERFAMILY SSF47384 561 633 1.63E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 SMART SM00388 565 633 4.8E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 SUPERFAMILY SSF55874 634 785 3.67E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 765 1.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 746 1.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 784 1.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 732 1.0E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 Gene3D G3DSA:1.10.287.130 541 628 1.2E-17 T 14-10-2018 VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 Gene3D G3DSA:3.30.565.10 635 787 8.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 682 785 1.2E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0209 ea03fbd7ee82274f298600baa230efc7 787 PIRSF PIRSF037119 1 787 0.0 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB VV2_0448 f83db9bffa8a8ef7a22fef1814ab5410 195 SUPERFAMILY SSF46689 2 64 3.13E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0448 f83db9bffa8a8ef7a22fef1814ab5410 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 6.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0448 f83db9bffa8a8ef7a22fef1814ab5410 195 Gene3D G3DSA:1.10.357.10 74 190 3.7E-14 T 14-10-2018 VV2_0448 f83db9bffa8a8ef7a22fef1814ab5410 195 Gene3D G3DSA:1.10.10.60 1 65 9.9E-20 T 14-10-2018 VV2_0448 f83db9bffa8a8ef7a22fef1814ab5410 195 SUPERFAMILY SSF48498 81 174 3.81E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 Pfam PF06445 GyrI-like small molecule binding domain 157 287 3.8E-16 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 Pfam PF12833 Helix-turn-helix domain 18 97 4.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 Gene3D G3DSA:1.10.10.60 1 48 1.6E-17 T 14-10-2018 VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 SUPERFAMILY SSF46689 49 99 3.0E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 SUPERFAMILY SSF55136 124 289 3.84E-23 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 SUPERFAMILY SSF46689 2 46 1.61E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 Gene3D G3DSA:3.20.80.10 123 289 4.3E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 64 79 5.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 79 95 5.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 SMART SM00871 123 288 1.1E-17 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 SMART SM00342 12 95 9.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1338 50df45ee0edef8b1b5c82668ed53ca85 290 Gene3D G3DSA:1.10.10.60 49 109 1.3E-15 T 14-10-2018 VV1_2053 73352a9ff33b02443466a75f39d99558 350 Gene3D G3DSA:3.30.70.270 182 345 1.0E-40 T 14-10-2018 VV1_2053 73352a9ff33b02443466a75f39d99558 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 339 2.0E-33 T 14-10-2018 IPR000160 GGDEF domain VV1_2053 73352a9ff33b02443466a75f39d99558 350 SMART SM00267 184 344 2.3E-43 T 14-10-2018 IPR000160 GGDEF domain VV1_2053 73352a9ff33b02443466a75f39d99558 350 SUPERFAMILY SSF55073 200 343 7.38E-34 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2053 73352a9ff33b02443466a75f39d99558 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 343 2.5E-33 T 14-10-2018 IPR000160 GGDEF domain VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0763 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0421 0a037777869756efb3dc571de155339a 340 SMART SM00267 169 337 1.0E-36 T 14-10-2018 IPR000160 GGDEF domain VV1_0421 0a037777869756efb3dc571de155339a 340 SUPERFAMILY SSF55073 185 332 1.33E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_0421 0a037777869756efb3dc571de155339a 340 Gene3D G3DSA:3.30.70.270 177 338 2.9E-40 T 14-10-2018 VV1_0421 0a037777869756efb3dc571de155339a 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 333 1.0E-33 T 14-10-2018 IPR000160 GGDEF domain VV1_0421 0a037777869756efb3dc571de155339a 340 SUPERFAMILY SSF55781 7 168 4.58E-28 T 14-10-2018 VV1_0421 0a037777869756efb3dc571de155339a 340 Gene3D G3DSA:3.30.450.40 26 176 1.0E-28 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_0421 0a037777869756efb3dc571de155339a 340 SMART SM00065 25 177 5.4E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV1_0421 0a037777869756efb3dc571de155339a 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 333 2.4E-34 T 14-10-2018 IPR000160 GGDEF domain VV1_0421 0a037777869756efb3dc571de155339a 340 Pfam PF13185 GAF domain 26 168 3.2E-17 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_0468 fe52300adc65ca927b76c077d1390724 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 328 5.1E-89 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VV2_0468 fe52300adc65ca927b76c077d1390724 331 SUPERFAMILY SSF51556 5 328 7.36E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV2_0468 fe52300adc65ca927b76c077d1390724 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.69 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VV2_0468 fe52300adc65ca927b76c077d1390724 331 Pfam PF00962 Adenosine/AMP deaminase 6 327 6.2E-71 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VV2_0468 fe52300adc65ca927b76c077d1390724 331 Gene3D G3DSA:3.20.20.140 3 331 1.6E-104 T 14-10-2018 VV1_2331 8bb5104b60bb109d243c933c781f0c34 462 Pfam PF00263 Bacterial type II and III secretion system protein 256 415 2.5E-40 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VV1_2331 8bb5104b60bb109d243c933c781f0c34 462 Pfam PF13629 Pilus formation protein N terminal region 23 92 7.2E-18 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VV1_2331 8bb5104b60bb109d243c933c781f0c34 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 417 4.7E-9 T 14-10-2018 IPR001775 GspD/PilQ family VV1_2331 8bb5104b60bb109d243c933c781f0c34 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 252 276 4.7E-9 T 14-10-2018 IPR001775 GspD/PilQ family VV1_2331 8bb5104b60bb109d243c933c781f0c34 462 PRINTS PR00811 Bacterial general secretion pathway protein D signature 380 398 4.7E-9 T 14-10-2018 IPR001775 GspD/PilQ family VV2_1178 3515b49d0216bf48baee58570d2dffac 281 Pfam PF00005 ABC transporter 36 191 2.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1178 3515b49d0216bf48baee58570d2dffac 281 SMART SM00382 44 241 3.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1178 3515b49d0216bf48baee58570d2dffac 281 SUPERFAMILY SSF52540 15 263 3.01E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1178 3515b49d0216bf48baee58570d2dffac 281 Gene3D G3DSA:3.40.50.300 13 280 2.3E-83 T 14-10-2018 VV2_1178 3515b49d0216bf48baee58570d2dffac 281 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 Pfam PF00005 ABC transporter 40 181 1.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 SUPERFAMILY SSF50331 256 374 2.11E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 Gene3D G3DSA:3.40.50.300 22 241 2.0E-65 T 14-10-2018 VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 Gene3D G3DSA:2.40.50.140 300 359 1.1E-27 T 14-10-2018 VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 SUPERFAMILY SSF52540 22 262 2.79E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 Gene3D G3DSA:2.40.50.940 242 368 1.1E-27 T 14-10-2018 VV1_2752 63c7a33a16013ab4c4b7fdf918e03997 393 SMART SM00382 48 231 8.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0120 402ae37b45ee40e345a858743308a3c4 80 SMART SM00883 2 79 3.9E-14 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_0120 402ae37b45ee40e345a858743308a3c4 80 Pfam PF00166 Chaperonin 10 Kd subunit 2 76 5.9E-9 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_0120 402ae37b45ee40e345a858743308a3c4 80 Gene3D G3DSA:2.30.33.40 1 79 4.3E-9 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VV1_0120 402ae37b45ee40e345a858743308a3c4 80 SUPERFAMILY SSF50129 1 78 5.26E-14 T 14-10-2018 IPR011032 GroES-like superfamily VV1_0120 402ae37b45ee40e345a858743308a3c4 80 PRINTS PR00297 10kDa chaperonin signature 3 18 3.6E-8 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_0120 402ae37b45ee40e345a858743308a3c4 80 PRINTS PR00297 10kDa chaperonin signature 45 57 3.6E-8 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_0120 402ae37b45ee40e345a858743308a3c4 80 PRINTS PR00297 10kDa chaperonin signature 66 79 3.6E-8 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_0120 402ae37b45ee40e345a858743308a3c4 80 PRINTS PR00297 10kDa chaperonin signature 19 40 3.6E-8 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_0850 960a899997cb550cbb874ad314054634 455 Gene3D G3DSA:1.20.1600.10 34 439 9.2E-40 T 14-10-2018 VV2_0850 960a899997cb550cbb874ad314054634 455 Pfam PF02321 Outer membrane efflux protein 42 221 3.1E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV2_0850 960a899997cb550cbb874ad314054634 455 Pfam PF02321 Outer membrane efflux protein 258 436 1.2E-14 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV2_0850 960a899997cb550cbb874ad314054634 455 SUPERFAMILY SSF56954 2 438 5.1E-51 T 14-10-2018 VV1_2235 ae0e2b3ae473474b078f16d22ee69dec 445 Pfam PF01609 Transposase DDE domain 129 356 1.2E-23 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV1_2235 ae0e2b3ae473474b078f16d22ee69dec 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV1_2235 ae0e2b3ae473474b078f16d22ee69dec 445 SUPERFAMILY SSF53098 94 390 1.44E-23 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 Gene3D G3DSA:1.10.287.130 340 436 1.6E-26 T 14-10-2018 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 SUPERFAMILY SSF47384 358 439 1.61E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 SMART SM00388 373 438 3.2E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 Gene3D G3DSA:3.40.50.2300 816 880 9.7E-19 T 14-10-2018 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 Pfam PF00072 Response regulator receiver domain 760 873 9.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 8.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 601 3.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 SUPERFAMILY SSF55874 427 604 1.83E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 Gene3D G3DSA:3.30.565.10 437 606 5.8E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 Gene3D G3DSA:3.40.50.12330 751 815 4.6E-20 T 14-10-2018 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 1.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 SMART SM00387 485 602 5.1E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 SUPERFAMILY SSF52172 756 876 2.28E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0761 f4b6a332f9d5c5ed0c527c1d9ac6edc2 881 SMART SM00448 758 875 3.0E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0184 bcb0d0c4cacaf3fef7cb187e4abfb412 168 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 167 46.158 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VV1_0184 bcb0d0c4cacaf3fef7cb187e4abfb412 168 SUPERFAMILY SSF50104 116 165 2.51E-5 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VV1_0184 bcb0d0c4cacaf3fef7cb187e4abfb412 168 Gene3D G3DSA:3.30.70.940 1 166 3.5E-52 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_0184 bcb0d0c4cacaf3fef7cb187e4abfb412 168 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 165 2.3E-62 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VV1_0184 bcb0d0c4cacaf3fef7cb187e4abfb412 168 Pfam PF02357 Transcription termination factor nusG 2 93 2.0E-21 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_0184 bcb0d0c4cacaf3fef7cb187e4abfb412 168 SUPERFAMILY SSF82679 1 104 6.93E-30 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_0184 bcb0d0c4cacaf3fef7cb187e4abfb412 168 SMART SM00738 1 101 1.5E-29 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.04 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.0E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 Gene3D G3DSA:3.40.50.720 6 259 3.6E-107 T 14-10-2018 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 6.8E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 SUPERFAMILY SSF51735 123 280 1.06E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 Gene3D G3DSA:3.40.50.10860 8 276 3.6E-107 T 14-10-2018 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 SUPERFAMILY SSF53223 1 122 1.25E-39 T 14-10-2018 VV1_2022 704950e0fae3b6e7bfeb5c0a3beb668f 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.0E-68 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.498 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.4E-29 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 82 95 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 25 46 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 3 18 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.6E-24 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 SMART SM00883 2 95 2.6E-39 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 Gene3D G3DSA:2.30.33.40 1 96 5.3E-33 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VV2_1135 9de5a28f64a06bdf32ff9f38832bd0d5 96 SUPERFAMILY SSF50129 1 96 8.12E-28 T 14-10-2018 IPR011032 GroES-like superfamily VV2_0726 6ad42e54dfd442cd126c19504d945ed0 384 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 28 373 6.2E-132 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like VV2_0726 6ad42e54dfd442cd126c19504d945ed0 384 Pfam PF01344 Kelch motif 81 129 9.7E-9 T 14-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VV2_0726 6ad42e54dfd442cd126c19504d945ed0 384 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 7 384 45.559 T 14-10-2018 IPR019936 Mutatrotase, YjhT-like VV2_0726 6ad42e54dfd442cd126c19504d945ed0 384 Gene3D G3DSA:2.120.10.80 189 379 7.0E-9 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VV2_0726 6ad42e54dfd442cd126c19504d945ed0 384 SUPERFAMILY SSF50965 28 362 2.09E-26 T 14-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller VV2_0726 6ad42e54dfd442cd126c19504d945ed0 384 Gene3D G3DSA:2.120.10.80 21 188 6.2E-15 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:3.40.50.2300 1 123 6.8E-31 T 14-10-2018 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 Pfam PF00158 Sigma-54 interaction domain 134 299 3.6E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 Pfam PF00072 Response regulator receiver domain 2 108 1.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 SUPERFAMILY SSF52540 133 376 6.52E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 Pfam PF02954 Bacterial regulatory protein, Fis family 404 444 8.6E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 SUPERFAMILY SSF46689 346 443 1.25E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 SMART SM00448 1 108 3.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:1.10.8.60 305 385 7.0E-24 T 14-10-2018 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 SMART SM00382 153 296 7.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:1.10.10.60 399 442 5.2E-8 T 14-10-2018 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 Gene3D G3DSA:3.40.50.300 124 304 1.9E-65 T 14-10-2018 VV1_3091 d71cd0b6b66bf70b0569a0bfe15fee41 453 SUPERFAMILY SSF52172 2 177 6.55E-40 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 SUPERFAMILY SSF53822 60 331 2.98E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 Gene3D G3DSA:1.10.260.40 3 59 1.0E-24 T 14-10-2018 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 Gene3D G3DSA:3.40.50.2300 69 322 1.3E-91 T 14-10-2018 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.3E-45 T 14-10-2018 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 SUPERFAMILY SSF47413 1 59 8.61E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 SMART SM00354 1 71 2.9E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.61 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_2138 64f2be1cc5da8495a1879eecc7ff967f 334 Gene3D G3DSA:3.40.50.2300 161 323 1.3E-91 T 14-10-2018 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 Gene3D G3DSA:3.30.70.1170 170 227 4.2E-26 T 14-10-2018 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 Gene3D G3DSA:3.40.50.150 228 425 2.6E-69 T 14-10-2018 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 Gene3D G3DSA:1.10.287.730 143 169 6.2E-13 T 14-10-2018 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.6E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.6E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.6E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.6E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.6E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 Gene3D G3DSA:1.10.940.10 1 142 1.2E-43 T 14-10-2018 IPR035926 NusB-like superfamily VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 1.7E-152 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 SUPERFAMILY SSF53335 139 424 4.56E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 1.4E-68 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 Pfam PF01029 NusB family 1 123 4.2E-24 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV1_1046 23566555b61694a1f75b213b1c82b0f5 426 SUPERFAMILY SSF48013 1 146 2.13E-36 T 14-10-2018 IPR035926 NusB-like superfamily VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SMART SM00448 4 114 1.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Gene3D G3DSA:3.40.50.2300 1 123 4.0E-33 T 14-10-2018 VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Gene3D G3DSA:1.10.10.10 124 235 4.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SUPERFAMILY SSF46894 137 233 1.81E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SMART SM00862 156 232 1.4E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 4.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 SUPERFAMILY SSF52172 2 123 1.29E-35 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0548 fd83e0b7bccd49e2d46e1e3a6dc8c204 238 Pfam PF00072 Response regulator receiver domain 6 113 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0437 2475df50e040e9b102f05c3379f2836b 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.3E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VV1_0437 2475df50e040e9b102f05c3379f2836b 127 Gene3D G3DSA:3.90.1010.10 1 127 5.5E-59 T 14-10-2018 VV1_0437 2475df50e040e9b102f05c3379f2836b 127 Pfam PF01592 NifU-like N terminal domain 2 125 1.3E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VV1_0437 2475df50e040e9b102f05c3379f2836b 127 SUPERFAMILY SSF82649 1 125 9.94E-48 T 14-10-2018 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 SUPERFAMILY SSF49785 563 673 1.57E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Gene3D G3DSA:3.40.50.200 144 545 7.8E-157 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Gene3D G3DSA:2.60.120.260 561 674 7.5E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 6.6E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 6.6E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 6.6E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Pfam PF00082 Subtilase family 474 538 4.9E-13 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Pfam PF00082 Subtilase family 146 345 1.2E-27 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Gene3D G3DSA:3.50.30.30 335 480 7.8E-157 T 14-10-2018 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 SUPERFAMILY SSF52743 123 548 4.37E-102 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Gene3D G3DSA:3.30.70.80 37 125 7.5E-6 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 SUPERFAMILY SSF54897 41 119 5.95E-6 T 14-10-2018 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Pfam PF01483 Proprotein convertase P-domain 595 673 7.0E-20 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VV2_1482 8b46afbfceaec5fa65c31f11f11a7c9e 674 Pfam PF05922 Peptidase inhibitor I9 43 120 4.1E-8 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VV1_1594 7872f5e15fa2f31a22e1cddda9c49a34 384 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 365 7.6E-75 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1594 7872f5e15fa2f31a22e1cddda9c49a34 384 Gene3D G3DSA:3.40.1160.10 4 257 5.7E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1594 7872f5e15fa2f31a22e1cddda9c49a34 384 SUPERFAMILY SSF53633 6 236 5.37E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1594 7872f5e15fa2f31a22e1cddda9c49a34 384 PIRSF PIRSF000726 59 348 1.9E-74 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1594 7872f5e15fa2f31a22e1cddda9c49a34 384 PIRSF PIRSF000726 3 64 1.5E-22 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1594 7872f5e15fa2f31a22e1cddda9c49a34 384 Pfam PF00696 Amino acid kinase family 5 231 7.9E-53 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV1_1594 7872f5e15fa2f31a22e1cddda9c49a34 384 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 Pfam PF00072 Response regulator receiver domain 28 136 5.3E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 Pfam PF01966 HD domain 340 461 1.3E-18 T 14-10-2018 IPR006674 HD domain VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 Gene3D G3DSA:1.10.3210.10 314 513 3.1E-69 T 14-10-2018 VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 SUPERFAMILY SSF52172 24 158 2.42E-12 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 SMART SM00471 334 471 5.6E-4 T 14-10-2018 IPR003607 HD/PDEase domain VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 Pfam PF11849 Domain of unknown function (DUF3369) 148 313 1.5E-44 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 Gene3D G3DSA:3.40.50.2300 18 167 6.5E-15 T 14-10-2018 VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 SUPERFAMILY SSF109604 324 500 6.91E-39 T 14-10-2018 VV2_0465 3cb208630c0cf0e7213a07d63e2186ee 513 SMART SM00448 26 148 0.0056 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 Gene3D G3DSA:3.40.50.2300 1 129 2.1E-35 T 14-10-2018 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 SUPERFAMILY SSF52172 4 188 3.56E-37 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 Pfam PF00158 Sigma-54 interaction domain 144 310 1.3E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 Gene3D G3DSA:3.40.50.300 131 314 9.7E-64 T 14-10-2018 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 Gene3D G3DSA:1.10.8.60 315 390 1.4E-19 T 14-10-2018 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 SUPERFAMILY SSF46689 387 440 9.86E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 SMART SM00448 2 114 1.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 Gene3D G3DSA:1.10.10.60 391 442 5.1E-13 T 14-10-2018 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 SMART SM00382 164 307 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 SUPERFAMILY SSF52540 144 373 1.25E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 Pfam PF00072 Response regulator receiver domain 5 114 4.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0026 767a2696b3306831f3d520b9370e6b2f 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 9.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 3.4E-31 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 Gene3D G3DSA:3.30.230.10 1 167 5.3E-7 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 SUPERFAMILY SSF52540 187 500 1.48E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 Gene3D G3DSA:3.40.50.300 171 500 5.4E-54 T 14-10-2018 VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 2.2E-90 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 SMART SM00382 210 390 9.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 SUPERFAMILY SSF54211 2 169 2.96E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.1E-209 T 14-10-2018 IPR004482 Mg chelatase-related protein VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.9E-47 T 14-10-2018 VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VV1_1033 610ac5a519501a4e621fcc6c311ac523 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VV2_1306 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 Pfam PF01554 MatE 19 179 2.1E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_1306 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 Pfam PF01554 MatE 247 404 1.2E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_1306 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 9.1E-58 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_1306 3fa2bd709bcbc982c6e7fe9e95f9f9d0 446 PIRSF PIRSF006603 2 446 9.0E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1950 e652d5e6410a5d8debac64bdc730c59c 497 SMART SM00962 284 477 1.8E-65 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1950 e652d5e6410a5d8debac64bdc730c59c 497 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 91 372 3.8E-70 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VV1_1950 e652d5e6410a5d8debac64bdc730c59c 497 Gene3D G3DSA:3.40.50.300 279 465 1.4E-58 T 14-10-2018 VV1_1950 e652d5e6410a5d8debac64bdc730c59c 497 SMART SM00382 283 450 2.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1950 e652d5e6410a5d8debac64bdc730c59c 497 Pfam PF00448 SRP54-type protein, GTPase domain 286 474 5.5E-39 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1950 e652d5e6410a5d8debac64bdc730c59c 497 Gene3D G3DSA:1.20.120.1380 259 468 1.4E-58 T 14-10-2018 VV1_1950 e652d5e6410a5d8debac64bdc730c59c 497 SUPERFAMILY SSF52540 280 472 1.02E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 269 3.2E-55 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 SUPERFAMILY SSF160964 24 269 1.22E-82 T 14-10-2018 VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 Gene3D G3DSA:3.10.650.10 108 277 2.3E-49 T 14-10-2018 VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 Gene3D G3DSA:1.20.58.370 18 105 2.2E-33 T 14-10-2018 IPR035277 MalF, N-terminal VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 306 511 5.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 SUPERFAMILY SSF161098 271 512 2.49E-58 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 Gene3D G3DSA:2.40.430.10 128 213 2.3E-49 T 14-10-2018 VV2_1586 33618e57ae68c3978fc3be997b1f5cc7 523 Gene3D G3DSA:1.10.3720.10 279 521 1.4E-68 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0767 e1a15b2eb869fd5207661341427163cd 294 Gene3D G3DSA:1.10.10.10 2 83 5.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0767 e1a15b2eb869fd5207661341427163cd 294 SUPERFAMILY SSF53850 93 291 5.74E-27 T 14-10-2018 VV2_0767 e1a15b2eb869fd5207661341427163cd 294 Pfam PF03466 LysR substrate binding domain 91 287 5.5E-26 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0767 e1a15b2eb869fd5207661341427163cd 294 Gene3D G3DSA:3.40.190.10 84 179 5.2E-14 T 14-10-2018 VV2_0767 e1a15b2eb869fd5207661341427163cd 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0767 e1a15b2eb869fd5207661341427163cd 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0767 e1a15b2eb869fd5207661341427163cd 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0767 e1a15b2eb869fd5207661341427163cd 294 Gene3D G3DSA:3.40.190.10 180 255 9.0E-7 T 14-10-2018 VV2_0767 e1a15b2eb869fd5207661341427163cd 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 4.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0767 e1a15b2eb869fd5207661341427163cd 294 SUPERFAMILY SSF46785 4 112 4.68E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1251 5299f93ab04266e167eb59844f0bdf59 157 SUPERFAMILY SSF75217 2 155 7.85E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_1251 5299f93ab04266e167eb59844f0bdf59 157 PIRSF PIRSF029256 1 157 3.0E-66 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VV1_1251 5299f93ab04266e167eb59844f0bdf59 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 6.1E-58 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VV1_1251 5299f93ab04266e167eb59844f0bdf59 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 32.573 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VV1_1251 5299f93ab04266e167eb59844f0bdf59 157 Pfam PF00588 SpoU rRNA Methylase family 3 144 6.3E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV1_1251 5299f93ab04266e167eb59844f0bdf59 157 Gene3D G3DSA:3.40.1280.10 1 157 8.1E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 SMART SM00937 9 119 1.1E-54 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 Gene3D G3DSA:3.30.160.20 150 245 1.7E-96 T 14-10-2018 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 SUPERFAMILY SSF75620 2 288 1.57E-123 T 14-10-2018 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 Gene3D G3DSA:3.30.70.1660 54 282 1.7E-96 T 14-10-2018 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 Pfam PF00472 RF-1 domain 153 261 1.7E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 Pfam PF03462 PCRF domain 5 143 4.9E-46 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 287 4.1E-147 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 4 289 31.375 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 169 185 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV1_0527 59ffaba5dcb99866ae3d146d3753558a 289 Gene3D G3DSA:1.20.58.410 1 40 1.5E-7 T 14-10-2018 VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 SUPERFAMILY SSF48008 79 270 2.01E-57 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 Pfam PF07840 FadR C-terminal domain 72 274 6.6E-68 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.636 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 SUPERFAMILY SSF46785 12 74 9.23E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.20.120.530 80 149 1.5E-6 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.20.120.530 153 278 1.7E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 5.6E-115 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 SMART SM00345 12 71 1.6E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2233 1aca3f06de035ce82b2ef02724a644ee 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_0754 5273cc45afa3f4f8b8c3e126ef70d552 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 6.5E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0754 5273cc45afa3f4f8b8c3e126ef70d552 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0754 5273cc45afa3f4f8b8c3e126ef70d552 63 SUPERFAMILY SSF46561 1 61 2.62E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0754 5273cc45afa3f4f8b8c3e126ef70d552 63 Gene3D G3DSA:1.10.287.310 1 63 1.2E-31 T 14-10-2018 VV1_0754 5273cc45afa3f4f8b8c3e126ef70d552 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.5E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0754 5273cc45afa3f4f8b8c3e126ef70d552 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.125 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 SMART SM00382 361 546 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 Pfam PF00005 ABC transporter 352 500 4.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 SUPERFAMILY SSF90123 2 321 1.31E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 Gene3D G3DSA:3.40.50.300 328 588 6.9E-82 T 14-10-2018 VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 Gene3D G3DSA:1.20.1560.10 1 323 2.5E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 SUPERFAMILY SSF52540 330 570 6.97E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2299 61e12be28c35058fc0f60cf32f0ba36e 591 Pfam PF00664 ABC transporter transmembrane region 20 287 1.3E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 SUPERFAMILY SSF55424 337 451 1.62E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 SUPERFAMILY SSF51905 1 362 5.51E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 8.4E-65 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 9.9E-70 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PIRSF PIRSF000350 1 445 1.4E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 Gene3D G3DSA:3.50.50.60 144 261 1.5E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 Gene3D G3DSA:3.50.50.60 5 315 1.5E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.5E-214 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 Gene3D G3DSA:3.30.390.30 339 451 1.7E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 2.1E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.1E-28 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.1E-28 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.1E-28 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.1E-28 T 14-10-2018 VV1_1105 b2ff14c2ee15d8c716bd4877b1bcaa9c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.1E-28 T 14-10-2018 VV2_0261 c8fb47c169e19e8fbcc46f7349806f71 204 SUPERFAMILY SSF46565 125 203 1.06E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV2_0261 c8fb47c169e19e8fbcc46f7349806f71 204 Pfam PF00226 DnaJ domain 158 203 1.3E-9 T 14-10-2018 IPR001623 DnaJ domain VV2_0261 c8fb47c169e19e8fbcc46f7349806f71 204 SMART SM00271 152 204 8.8E-8 T 14-10-2018 IPR001623 DnaJ domain VV2_0261 c8fb47c169e19e8fbcc46f7349806f71 204 Gene3D G3DSA:1.10.287.110 147 204 6.8E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV2_0261 c8fb47c169e19e8fbcc46f7349806f71 204 Pfam PF12339 DNA-J related protein 16 137 6.6E-42 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal VV1_2244 01e08ee4b34fc81818777803a034c16f 627 SMART SM00283 365 626 8.3E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 Pfam PF02743 Cache domain 43 258 2.5E-29 T 14-10-2018 IPR033479 Double Cache domain 1 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 SMART SM00304 353 403 3.3 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 SMART SM00304 296 350 6.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 SUPERFAMILY SSF103190 89 175 1.96E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_2244 01e08ee4b34fc81818777803a034c16f 627 Gene3D G3DSA:1.10.287.950 297 627 5.1E-72 T 14-10-2018 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 SUPERFAMILY SSF58104 318 627 4.19E-76 T 14-10-2018 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 Pfam PF00672 HAMP domain 300 346 3.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 424 593 3.5E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 Gene3D G3DSA:3.30.450.20 64 168 4.0E-53 T 14-10-2018 VV1_2244 01e08ee4b34fc81818777803a034c16f 627 Gene3D G3DSA:3.30.450.20 52 269 4.0E-53 T 14-10-2018 VV2_0686 22d50f9a216572f17108e0df455d232e 282 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 267 3.5E-95 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VV2_0686 22d50f9a216572f17108e0df455d232e 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 275 5.4E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_0686 22d50f9a216572f17108e0df455d232e 282 SUPERFAMILY SSF161098 17 266 1.12E-52 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0686 22d50f9a216572f17108e0df455d232e 282 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 8.4E-122 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 VV2_0686 22d50f9a216572f17108e0df455d232e 282 Gene3D G3DSA:1.10.3720.10 13 274 4.7E-67 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0546 ada2de1429f557de857f8d9cbf5fd373 154 PIRSF PIRSF028680 1 154 3.2E-78 T 14-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VV2_1061 0934718d76ab8c20b9f86c240392a525 491 Pfam PF03553 Na+/H+ antiporter family 160 464 6.9E-51 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VV2_1061 0934718d76ab8c20b9f86c240392a525 491 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 470 7.9E-162 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 103 372 7.5E-180 T 14-10-2018 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 7.6E-199 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.375 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 5 233 7.5E-180 T 14-10-2018 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 PIRSF PIRSF000497 1 381 4.3E-175 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.6E-46 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 233 382 1.53E-70 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.5E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 Gene3D G3DSA:3.30.300.10 11 270 7.5E-180 T 14-10-2018 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 SUPERFAMILY SSF55973 111 232 1.26E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_1536 e302b638d54fd031d9662cacf5f03309 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 Pfam PF04055 Radical SAM superfamily 24 186 5.5E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 10 334 36.757 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 334 3.7E-105 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 SUPERFAMILY SSF102114 11 286 1.44E-69 T 14-10-2018 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 Pfam PF13353 4Fe-4S single cluster domain 28 130 1.8E-9 T 14-10-2018 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 Gene3D G3DSA:3.20.20.70 7 334 2.1E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 SMART SM00729 19 224 9.2E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV1_3088 59a797c6d60cc20b401a7a679a37e636 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 317 5.4E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 Pfam PF16448 LapD/MoxY periplasmic domain 25 148 9.6E-37 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 Gene3D G3DSA:3.30.1040.50 104 153 4.3E-17 T 14-10-2018 VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 Pfam PF00563 EAL domain 413 637 3.4E-40 T 14-10-2018 IPR001633 EAL domain VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 Gene3D G3DSA:3.20.20.450 403 638 2.6E-40 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 389 1.0E-13 T 14-10-2018 IPR000160 GGDEF domain VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 SMART SM00267 228 395 4.3E-13 T 14-10-2018 IPR000160 GGDEF domain VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 SMART SM00052 405 637 8.0E-12 T 14-10-2018 IPR001633 EAL domain VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 SUPERFAMILY SSF141868 413 638 2.88E-40 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 Gene3D G3DSA:3.30.70.270 225 395 1.5E-21 T 14-10-2018 VV2_1127 a494d85cd61b14cd10dd36b4a139ed5f 639 SUPERFAMILY SSF55073 245 393 4.63E-17 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2840 567bd1971d21cd8a7b58e0d0c95ba79a 831 Pfam PF00027 Cyclic nucleotide-binding domain 727 813 1.0E-6 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2840 567bd1971d21cd8a7b58e0d0c95ba79a 831 SUPERFAMILY SSF51206 701 825 7.33E-14 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_2840 567bd1971d21cd8a7b58e0d0c95ba79a 831 Pfam PF00999 Sodium/hydrogen exchanger family 11 426 7.5E-62 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV1_2840 567bd1971d21cd8a7b58e0d0c95ba79a 831 Gene3D G3DSA:2.60.120.10 666 830 2.8E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_2087 7b6a346ccea0ff071df3b0ea4637e27b 59 SUPERFAMILY SSF158997 1 53 3.27E-20 T 14-10-2018 VV1_2087 7b6a346ccea0ff071df3b0ea4637e27b 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.232 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 VV1_2087 7b6a346ccea0ff071df3b0ea4637e27b 59 Pfam PF03966 Trm112p-like protein 2 41 3.1E-11 T 14-10-2018 IPR005651 Trm112-like VV1_2087 7b6a346ccea0ff071df3b0ea4637e27b 59 Gene3D G3DSA:2.20.25.10 8 59 3.1E-23 T 14-10-2018 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 SUPERFAMILY SSF46689 489 584 6.4E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 Gene3D G3DSA:3.40.50.300 266 452 2.9E-55 T 14-10-2018 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 SUPERFAMILY SSF52540 284 510 5.4E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 SMART SM00382 300 444 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 Gene3D G3DSA:1.10.8.60 458 528 3.5E-10 T 14-10-2018 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 Gene3D G3DSA:1.10.10.60 541 582 5.0E-10 T 14-10-2018 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 Pfam PF01590 GAF domain 91 185 8.5E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 5.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 5.6E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 Pfam PF00158 Sigma-54 interaction domain 285 447 2.0E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV2_0870 92ce19bff0587fb4db4d8ef6e30d87b9 589 Gene3D G3DSA:3.30.450.40 4 188 3.0E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 2.6E-57 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 32.116 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 Gene3D G3DSA:3.40.50.720 3 356 7.2E-148 T 14-10-2018 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 SUPERFAMILY SSF51735 1 146 1.04E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.0E-21 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 Gene3D G3DSA:3.30.360.10 134 350 7.2E-148 T 14-10-2018 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 PIRSF PIRSF000148 1 371 1.4E-66 T 14-10-2018 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 SMART SM00859 2 121 1.4E-23 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 SUPERFAMILY SSF55347 133 354 4.76E-78 T 14-10-2018 VV1_3115 97085a0ba0d9127803fa6a1674e0fb25 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 2.1E-190 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_2861 2e35a6ac48ee0214dc1b646060565564 216 SMART SM00382 28 212 3.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2861 2e35a6ac48ee0214dc1b646060565564 216 Gene3D G3DSA:3.40.50.300 1 207 6.0E-53 T 14-10-2018 VV1_2861 2e35a6ac48ee0214dc1b646060565564 216 SUPERFAMILY SSF52540 10 199 5.9E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2861 2e35a6ac48ee0214dc1b646060565564 216 Pfam PF00005 ABC transporter 20 163 2.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2861 2e35a6ac48ee0214dc1b646060565564 216 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2243 a2412d07582d2579254e3a19353531e4 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 6.1E-136 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VV1_2243 a2412d07582d2579254e3a19353531e4 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.2E-173 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VV1_2243 a2412d07582d2579254e3a19353531e4 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 Pfam PF13533 Biotin-lipoyl like 71 110 3.8E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 Gene3D G3DSA:2.40.30.170 282 330 6.7E-15 T 14-10-2018 VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 Gene3D G3DSA:1.10.287.470 99 161 3.3E-11 T 14-10-2018 VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 SUPERFAMILY SSF111369 64 173 3.66E-7 T 14-10-2018 VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 Gene3D G3DSA:1.10.287.470 177 248 6.7E-15 T 14-10-2018 VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 Gene3D G3DSA:2.40.50.100 249 281 6.7E-15 T 14-10-2018 VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 227 321 1.3E-7 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 SUPERFAMILY SSF111369 199 290 1.83E-6 T 14-10-2018 VV2_0784 c74bb67ff3d208a083f1c631925c25e2 407 Gene3D G3DSA:2.40.50.100 70 98 3.3E-11 T 14-10-2018 VV1_2372 0870cf7a6748f4e6439b7e508ea3ccab 437 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 411 1.3E-76 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VV1_2372 0870cf7a6748f4e6439b7e508ea3ccab 437 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.446 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VV1_2372 0870cf7a6748f4e6439b7e508ea3ccab 437 SUPERFAMILY SSF54675 8 147 5.89E-35 T 14-10-2018 VV1_2372 0870cf7a6748f4e6439b7e508ea3ccab 437 SUPERFAMILY SSF51690 129 410 2.16E-86 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VV1_2372 0870cf7a6748f4e6439b7e508ea3ccab 437 PIRSF PIRSF000484 1 407 1.4E-73 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VV1_2372 0870cf7a6748f4e6439b7e508ea3ccab 437 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 5.7E-156 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VV1_2372 0870cf7a6748f4e6439b7e508ea3ccab 437 Gene3D G3DSA:3.20.140.10 2 427 3.6E-165 T 14-10-2018 VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 4.7E-101 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 SUPERFAMILY SSF51735 9 247 8.2E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 Gene3D G3DSA:3.40.50.720 1 248 1.6E-91 T 14-10-2018 VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 3.3E-68 T 14-10-2018 VV1_3009 1c63044d74d46ac9635bcc83a4858e5c 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 219 6.2E-6 T 14-10-2018 VV1_1222 b495591915da2f353560604d6774dcb0 196 Gene3D G3DSA:1.20.1590.10 3 195 1.4E-64 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily VV1_1222 b495591915da2f353560604d6774dcb0 196 Pfam PF04222 Protein of unknown function (DUF416) 6 193 5.2E-75 T 14-10-2018 IPR007338 Protein of unknown function DUF416 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 2.3E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 192 211 2.3E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 239 2.3E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 254 269 2.3E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 431 478 6.3E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 SUPERFAMILY SSF53738 13 199 2.5E-40 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Gene3D G3DSA:3.30.310.50 381 481 1.1E-15 T 14-10-2018 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 279 390 4.5E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Gene3D G3DSA:3.40.120.10 5 183 1.7E-46 T 14-10-2018 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 SUPERFAMILY SSF55957 385 471 2.75E-17 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 148 3.1E-37 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Gene3D G3DSA:3.40.120.10 275 380 1.2E-59 T 14-10-2018 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 174 274 4.9E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 SUPERFAMILY SSF53738 262 391 2.79E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1664 3d2d1f3324a552f7c49979e9cbd49e80 482 Gene3D G3DSA:3.40.120.10 184 377 1.2E-59 T 14-10-2018 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 297 1.6E-30 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.30.70.120 225 298 3.6E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 SUPERFAMILY SSF54913 225 297 5.23E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Pfam PF08029 HisG, C-terminal domain 222 295 5.1E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.40.190.10 102 191 2.1E-70 T 14-10-2018 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 SUPERFAMILY SSF53850 5 222 4.25E-67 T 14-10-2018 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.48 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 3.3E-55 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Gene3D G3DSA:3.40.190.10 6 219 2.1E-70 T 14-10-2018 VV1_2920 f72660d3af5fd7f5cdd3e128e2dbd9ea 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 7.7E-46 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VV1_0528 0355655d9068f979a048495b2e3b0323 579 SUPERFAMILY SSF64182 45 462 1.44E-118 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VV1_0528 0355655d9068f979a048495b2e3b0323 579 Pfam PF02272 DHHA1 domain 319 451 2.7E-26 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VV1_0528 0355655d9068f979a048495b2e3b0323 579 Gene3D G3DSA:3.10.310.30 325 456 4.1E-30 T 14-10-2018 VV1_0528 0355655d9068f979a048495b2e3b0323 579 Pfam PF01368 DHH family 71 204 2.0E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VV1_0528 0355655d9068f979a048495b2e3b0323 579 Gene3D G3DSA:3.90.1640.30 44 323 4.2E-88 T 14-10-2018 VV1_0528 0355655d9068f979a048495b2e3b0323 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 575 1.6E-155 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 488 85.456 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 1.1E-196 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 SMART SM01240 9 475 0.0 T 14-10-2018 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 PIRSF PIRSF000130 2 489 3.1E-202 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 Pfam PF00571 CBS domain 151 203 4.7E-4 T 14-10-2018 IPR000644 CBS domain VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 Pfam PF00571 CBS domain 97 142 7.2E-10 T 14-10-2018 IPR000644 CBS domain VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 297 309 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 475 1.5E-163 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 SUPERFAMILY SSF51412 3 479 8.63E-126 T 14-10-2018 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 SUPERFAMILY SSF54631 96 205 1.89E-26 T 14-10-2018 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 Gene3D G3DSA:3.20.20.70 2 488 1.2E-212 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 SMART SM00116 98 146 1.0E-12 T 14-10-2018 IPR000644 CBS domain VV1_0419 9768c134d029ffc8fdea53ce2b62ceaf 489 SMART SM00116 160 208 2.3E-5 T 14-10-2018 IPR000644 CBS domain VV2_1032 6e3821f3a44020e5377ed05967224758 655 Gene3D G3DSA:1.25.40.880 387 528 3.8E-59 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VV2_1032 6e3821f3a44020e5377ed05967224758 655 Pfam PF14864 Alkyl sulfatase C-terminal 536 655 2.9E-30 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal VV2_1032 6e3821f3a44020e5377ed05967224758 655 Gene3D G3DSA:3.60.15.30 27 386 5.4E-149 T 14-10-2018 VV2_1032 6e3821f3a44020e5377ed05967224758 655 SUPERFAMILY SSF56281 30 529 5.6E-147 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1032 6e3821f3a44020e5377ed05967224758 655 SUPERFAMILY SSF55718 538 655 2.05E-27 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV2_1032 6e3821f3a44020e5377ed05967224758 655 Gene3D G3DSA:3.30.1050.10 531 655 1.1E-31 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV2_1032 6e3821f3a44020e5377ed05967224758 655 Pfam PF00753 Metallo-beta-lactamase superfamily 125 351 7.7E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_1032 6e3821f3a44020e5377ed05967224758 655 SMART SM00849 129 351 2.2E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_1032 6e3821f3a44020e5377ed05967224758 655 Pfam PF14863 Alkyl sulfatase dimerisation 388 527 4.5E-57 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VV1_0167 357580ae679ac91485871a09d001ba56 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VV1_0167 357580ae679ac91485871a09d001ba56 127 SUPERFAMILY SSF55298 3 126 1.57E-47 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV1_0167 357580ae679ac91485871a09d001ba56 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 7.0E-50 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VV1_0167 357580ae679ac91485871a09d001ba56 127 Gene3D G3DSA:3.30.1330.40 1 127 8.0E-53 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV1_0167 357580ae679ac91485871a09d001ba56 127 Pfam PF01042 Endoribonuclease L-PSP 9 125 3.1E-43 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 PRINTS PR00095 Anthranilate synthase component I signature 414 428 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 PRINTS PR00095 Anthranilate synthase component I signature 319 332 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 PRINTS PR00095 Anthranilate synthase component I signature 399 413 2.9E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 Pfam PF00425 chorismate binding enzyme 204 457 6.6E-98 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 SUPERFAMILY SSF56322 22 465 3.01E-145 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 Pfam PF04715 Anthranilate synthase component I, N terminal region 37 168 1.2E-27 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 Gene3D G3DSA:3.60.120.10 17 466 6.0E-175 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV1_2265 681ab01d7c3b812d3ac0579d835349e2 466 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 122 458 9.2E-126 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 VV2_0358 b3147c7d951587e251518b618997911c 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 2.0E-147 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV2_0358 b3147c7d951587e251518b618997911c 442 PIRSF PIRSF004539 1 441 6.1E-182 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV2_0358 b3147c7d951587e251518b618997911c 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 3.4E-145 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 ProSitePatterns PS01068 OmpA-like domain. 276 320 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 Pfam PF00691 OmpA family 243 338 1.1E-24 T 14-10-2018 IPR006665 OmpA-like domain VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 Gene3D G3DSA:3.30.1330.60 227 351 4.7E-42 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 SUPERFAMILY SSF56925 24 183 4.45E-33 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 Pfam PF01389 OmpA-like transmembrane domain 27 182 1.9E-21 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 SUPERFAMILY SSF103088 234 344 1.57E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 PRINTS PR01021 OMPA domain signature 274 289 6.5E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 PRINTS PR01021 OMPA domain signature 244 266 6.5E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 PRINTS PR01021 OMPA domain signature 289 305 6.5E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_0559 62ee11e9a7d18d93a0f27544132d55ba 357 Gene3D G3DSA:2.40.160.20 12 209 8.4E-41 T 14-10-2018 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 SUPERFAMILY SSF53671 4 333 2.23E-97 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 Gene3D G3DSA:3.40.50.1370 151 319 1.5E-145 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 3.8E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 Gene3D G3DSA:3.40.50.1370 5 329 1.5E-145 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.6E-133 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.0E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 4.0E-58 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.489 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VV1_1466 f27c2057868300b60857452c8e19ab0e 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.3E-31 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VV2_1537 d2622445b49703b037ccf0f2e52c4a10 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 6.6E-33 T 14-10-2018 IPR000160 GGDEF domain VV2_1537 d2622445b49703b037ccf0f2e52c4a10 527 SMART SM00267 358 526 2.1E-33 T 14-10-2018 IPR000160 GGDEF domain VV2_1537 d2622445b49703b037ccf0f2e52c4a10 527 SUPERFAMILY SSF55073 374 525 3.69E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1537 d2622445b49703b037ccf0f2e52c4a10 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 525 6.0E-34 T 14-10-2018 IPR000160 GGDEF domain VV2_1537 d2622445b49703b037ccf0f2e52c4a10 527 SUPERFAMILY SSF48452 38 245 2.75E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1537 d2622445b49703b037ccf0f2e52c4a10 527 Gene3D G3DSA:1.25.40.10 33 357 5.9E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1537 d2622445b49703b037ccf0f2e52c4a10 527 Gene3D G3DSA:3.30.70.270 358 526 1.7E-42 T 14-10-2018 VV2_1513 17cfff0529a9f4f3bf29ce45825d3406 133 Gene3D G3DSA:2.40.50.200 28 133 2.5E-35 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VV2_1513 17cfff0529a9f4f3bf29ce45825d3406 133 Pfam PF04076 Bacterial OB fold (BOF) protein 35 132 1.1E-31 T 14-10-2018 IPR005220 Bacterial OB-fold VV2_1513 17cfff0529a9f4f3bf29ce45825d3406 133 SUPERFAMILY SSF101756 31 133 5.75E-33 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 Pfam PF00773 RNB domain 193 521 1.7E-86 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 SUPERFAMILY SSF50249 568 649 1.14E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 Pfam PF00575 S1 RNA binding domain 568 645 8.7E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 SMART SM00955 193 523 4.3E-115 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 SMART SM00316 566 650 6.8E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 SMART SM00357 23 79 3.8E-9 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 Pfam PF08206 Ribonuclease B OB domain 24 80 1.0E-17 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 SUPERFAMILY SSF50249 186 563 4.74E-108 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 Gene3D G3DSA:2.40.50.140 1 82 1.0E-27 T 14-10-2018 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 SUPERFAMILY SSF50249 83 173 7.78E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 Gene3D G3DSA:2.40.50.140 566 651 9.3E-33 T 14-10-2018 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 3.6E-184 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 SUPERFAMILY SSF50249 8 80 1.86E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 Gene3D G3DSA:2.40.50.640 83 157 1.3E-30 T 14-10-2018 VV2_0146 e27ce1ac283c7d294f4dc478e53c3fea 664 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 43.091 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.1E-266 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 SUPERFAMILY SSF55261 288 419 8.34E-48 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 Gene3D G3DSA:3.30.930.10 118 578 2.6E-196 T 14-10-2018 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 Pfam PF02938 GAD domain 307 406 2.6E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 SUPERFAMILY SSF55681 108 582 1.07E-102 T 14-10-2018 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.282 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 Gene3D G3DSA:3.30.1360.30 271 420 2.6E-196 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 SUPERFAMILY SSF50249 1 105 6.29E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2156 bfb640922958fbeb029667606b3d46ec 592 Gene3D G3DSA:2.40.50.140 1 106 2.7E-35 T 14-10-2018 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.4E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.0E-104 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2156 bfb640922958fbeb029667606b3d46ec 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 Gene3D G3DSA:3.30.2340.10 170 302 2.4E-105 T 14-10-2018 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 Gene3D G3DSA:3.30.2350.20 18 337 2.4E-105 T 14-10-2018 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 225 4.7E-55 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 6.5E-42 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 7.5E-20 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 SUPERFAMILY SSF55120 7 339 2.16E-97 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VV1_1584 7a7228b9d68a206dfa48d432c7244ff4 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 29.176 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 SUPERFAMILY SSF63411 50 259 7.67E-56 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Gene3D G3DSA:3.30.830.10 275 475 7.5E-32 T 14-10-2018 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 SUPERFAMILY SSF63411 281 469 6.17E-30 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Gene3D G3DSA:3.30.830.10 525 730 2.9E-47 T 14-10-2018 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Pfam PF05193 Peptidase M16 inactive domain 687 858 9.3E-20 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Pfam PF05193 Peptidase M16 inactive domain 220 394 1.4E-29 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Gene3D G3DSA:3.30.830.10 743 937 2.8E-35 T 14-10-2018 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Gene3D G3DSA:3.30.830.10 48 271 1.3E-67 T 14-10-2018 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 SUPERFAMILY SSF63411 519 721 3.83E-48 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 SUPERFAMILY SSF63411 738 942 7.81E-41 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Pfam PF00675 Insulinase (Peptidase family M16) 541 654 1.7E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VV1_1605 693ebc1b9a619ea627776b529ee27761 952 Pfam PF00675 Insulinase (Peptidase family M16) 63 180 1.3E-17 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VV2_1316 e39df3d15ba533ce4bc94da2286152cf 143 SUPERFAMILY SSF53474 3 119 9.38E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:3.40.50.620 1 187 3.9E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF06574 FAD synthetase 12 167 3.0E-57 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 PIRSF PIRSF004491 1 311 3.0E-106 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 Gene3D G3DSA:2.40.30.30 188 311 4.9E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 2.3E-108 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF52374 15 175 3.75E-33 T 14-10-2018 VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 SMART SM00904 183 307 5.5E-63 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 SUPERFAMILY SSF82114 174 309 1.92E-45 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VV1_0508 99fa8cdfd675ec384f7b512091c2071d 311 Pfam PF01687 Riboflavin kinase 184 306 4.0E-38 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VV2_1310 1625e3b914b3a12c4decd38cbed2f7ff 96 Gene3D G3DSA:1.20.5.780 2 87 3.8E-14 T 14-10-2018 VV2_1310 1625e3b914b3a12c4decd38cbed2f7ff 96 Pfam PF08681 Protein of unknown function (DUF1778) 8 82 5.7E-16 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 VV2_1310 1625e3b914b3a12c4decd38cbed2f7ff 96 SUPERFAMILY SSF47598 5 81 7.56E-17 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VV1_0318 af56929e8f868c7031a22642affb9a2e 155 SUPERFAMILY SSF48013 7 153 1.7E-38 T 14-10-2018 IPR035926 NusB-like superfamily VV1_0318 af56929e8f868c7031a22642affb9a2e 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 1.3E-42 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 VV1_0318 af56929e8f868c7031a22642affb9a2e 155 Pfam PF01029 NusB family 11 149 2.7E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VV1_0318 af56929e8f868c7031a22642affb9a2e 155 Gene3D G3DSA:1.10.940.10 3 155 1.2E-47 T 14-10-2018 IPR035926 NusB-like superfamily VV1_0318 af56929e8f868c7031a22642affb9a2e 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 22.977 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 VV1_0688 9b8895c0f0d32d18af2fd0e39de92c62 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 1.6E-7 T 14-10-2018 VV1_0688 9b8895c0f0d32d18af2fd0e39de92c62 185 PIRSF PIRSF006118 10 185 4.9E-75 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV1_0688 9b8895c0f0d32d18af2fd0e39de92c62 185 SUPERFAMILY SSF56784 21 178 1.84E-39 T 14-10-2018 IPR036412 HAD-like superfamily VV1_0688 9b8895c0f0d32d18af2fd0e39de92c62 185 Gene3D G3DSA:3.40.50.1000 2 185 5.0E-57 T 14-10-2018 IPR023214 HAD superfamily VV1_0688 9b8895c0f0d32d18af2fd0e39de92c62 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 174 5.8E-62 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV1_1008 7922789aa7a3597a729ef780700da97d 462 Pfam PF01926 50S ribosome-binding GTPase 226 315 5.2E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_1008 7922789aa7a3597a729ef780700da97d 462 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 13 462 33.028 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VV1_1008 7922789aa7a3597a729ef780700da97d 462 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 19 462 6.6E-102 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VV1_1008 7922789aa7a3597a729ef780700da97d 462 SUPERFAMILY SSF52540 79 380 1.27E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1008 7922789aa7a3597a729ef780700da97d 462 Gene3D G3DSA:3.40.50.300 225 390 1.7E-104 T 14-10-2018 VV1_1008 7922789aa7a3597a729ef780700da97d 462 SUPERFAMILY SSF116878 129 462 2.75E-53 T 14-10-2018 VV1_1008 7922789aa7a3597a729ef780700da97d 462 Pfam PF10396 GTP-binding protein TrmE N-terminus 14 128 2.5E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VV1_1008 7922789aa7a3597a729ef780700da97d 462 Pfam PF12631 MnmE helical domain 131 459 4.7E-62 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VV1_1008 7922789aa7a3597a729ef780700da97d 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 379 1.6E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1008 7922789aa7a3597a729ef780700da97d 462 Gene3D G3DSA:3.30.1360.120 3 129 3.7E-39 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VV1_1008 7922789aa7a3597a729ef780700da97d 462 Gene3D G3DSA:1.20.120.430 130 462 1.7E-104 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VV1_1679 98410e6eed6f1d7dd75f6c4309f1681b 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VV1_1679 98410e6eed6f1d7dd75f6c4309f1681b 113 Gene3D G3DSA:2.60.300.12 7 113 1.0E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VV1_1679 98410e6eed6f1d7dd75f6c4309f1681b 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.8E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VV1_1679 98410e6eed6f1d7dd75f6c4309f1681b 113 SUPERFAMILY SSF89360 7 99 8.83E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VV1_1679 98410e6eed6f1d7dd75f6c4309f1681b 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.3E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VV1_1679 98410e6eed6f1d7dd75f6c4309f1681b 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.96 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 Gene3D G3DSA:3.40.640.10 88 356 2.6E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 892 2.8E-63 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 Gene3D G3DSA:3.40.640.10 576 844 2.9E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 Gene3D G3DSA:3.90.1150.10 562 948 2.9E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 Gene3D G3DSA:1.20.1650.10 464 561 8.4E-41 T 14-10-2018 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 SUPERFAMILY SSF53383 501 957 3.52E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 Pfam PF00202 Aminotransferase class-III 52 465 4.2E-94 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 Gene3D G3DSA:3.90.1150.10 39 463 2.6E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 SUPERFAMILY SSF53383 43 465 2.04E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_3050 62863d1affba0bdfe2692fd2e44ea357 959 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 35 467 3.8E-158 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VV2_0391 dfaa2e494877df9d104273ea41acaad7 280 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0391 dfaa2e494877df9d104273ea41acaad7 280 SUPERFAMILY SSF52540 6 226 2.1E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0391 dfaa2e494877df9d104273ea41acaad7 280 SMART SM00382 34 216 1.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0391 dfaa2e494877df9d104273ea41acaad7 280 Pfam PF00005 ABC transporter 25 166 1.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0391 dfaa2e494877df9d104273ea41acaad7 280 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 4.6E-106 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 VV2_0391 dfaa2e494877df9d104273ea41acaad7 280 Gene3D G3DSA:3.40.50.300 3 278 2.8E-62 T 14-10-2018 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 Gene3D G3DSA:1.10.287.950 305 637 7.4E-78 T 14-10-2018 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 603 3.1E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 SUPERFAMILY SSF58104 328 637 9.02E-80 T 14-10-2018 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 SMART SM00283 375 636 2.5E-85 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 Gene3D G3DSA:3.30.450.20 158 282 5.8E-23 T 14-10-2018 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 SMART SM00304 306 360 3.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 Pfam PF02743 Cache domain 52 268 5.0E-13 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 531 7.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 7.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 500 7.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1567 1f459db516c432f4268ac1b4ba316991 637 Pfam PF00672 HAMP domain 307 356 1.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0236 b3336b7f78d276ba737780b83a7c71cd 543 Gene3D G3DSA:3.40.50.300 1 336 7.4E-17 T 14-10-2018 VV2_0236 b3336b7f78d276ba737780b83a7c71cd 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 2.0E-153 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 VV2_0236 b3336b7f78d276ba737780b83a7c71cd 543 SUPERFAMILY SSF52540 1 323 4.41E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1521 fd869186248617da1c587d79ecfffb0f 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 2.7E-47 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 VV1_1521 fd869186248617da1c587d79ecfffb0f 143 Gene3D G3DSA:2.60.40.3340 14 143 6.5E-39 T 14-10-2018 VV1_1123 fd651db577dad474bc10148885da2d1e 844 Pfam PF01295 Adenylate cyclase, class-I 226 829 1.9E-256 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VV1_1123 fd651db577dad474bc10148885da2d1e 844 Pfam PF12633 Adenylate cyclase NT domain 5 198 4.0E-76 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VV1_1123 fd651db577dad474bc10148885da2d1e 844 PIRSF PIRSF001444 1 844 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VV1_1230 633fb407c639cfc21b9d242199957c48 546 Pfam PF00672 HAMP domain 216 264 1.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1230 633fb407c639cfc21b9d242199957c48 546 Gene3D G3DSA:1.10.287.950 215 546 3.2E-68 T 14-10-2018 VV1_1230 633fb407c639cfc21b9d242199957c48 546 SUPERFAMILY SSF58104 237 546 3.53E-70 T 14-10-2018 VV1_1230 633fb407c639cfc21b9d242199957c48 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 509 1.3E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1230 633fb407c639cfc21b9d242199957c48 546 SMART SM01049 38 132 7.4E-45 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_1230 633fb407c639cfc21b9d242199957c48 546 Pfam PF17200 Single Cache domain 2 41 190 8.8E-46 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_1230 633fb407c639cfc21b9d242199957c48 546 SMART SM00304 215 269 1.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1230 633fb407c639cfc21b9d242199957c48 546 Gene3D G3DSA:3.30.450.20 37 192 6.5E-64 T 14-10-2018 VV1_1230 633fb407c639cfc21b9d242199957c48 546 SMART SM00283 284 545 5.6E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2808 944a1a955801f3712aca40c6a4e21278 414 Gene3D G3DSA:3.90.1150.10 24 405 6.1E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2808 944a1a955801f3712aca40c6a4e21278 414 Gene3D G3DSA:3.40.640.10 33 289 6.1E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2808 944a1a955801f3712aca40c6a4e21278 414 Pfam PF00266 Aminotransferase class-V 26 401 1.7E-71 T 14-10-2018 IPR000192 Aminotransferase class V domain VV1_2808 944a1a955801f3712aca40c6a4e21278 414 SUPERFAMILY SSF53383 5 410 2.55E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2808 944a1a955801f3712aca40c6a4e21278 414 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 5 404 1.1E-164 T 14-10-2018 IPR011340 Cysteine desulfurase-related VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 SMART SM00304 222 276 6.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 516 1.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 Gene3D G3DSA:3.30.450.20 30 200 5.6E-36 T 14-10-2018 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 7.8E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 7.8E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 Pfam PF17200 Single Cache domain 2 48 188 7.2E-33 T 14-10-2018 IPR033480 Single Cache domain 2 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 Gene3D G3DSA:1.10.287.950 221 553 1.2E-69 T 14-10-2018 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 SMART SM01049 44 130 3.8E-19 T 14-10-2018 IPR033480 Single Cache domain 2 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 SMART SM00283 291 552 1.9E-71 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1195 574686d0bcc31a62525b64bfa367bd27 553 SUPERFAMILY SSF58104 244 553 1.01E-74 T 14-10-2018 VV2_0706 a20629214d2b7126cec4ae168534acdc 392 Pfam PF03090 Replicase family 40 171 4.8E-39 T 14-10-2018 IPR004322 Plasmid replicase, bacterial VV2_0706 a20629214d2b7126cec4ae168534acdc 392 Pfam PF08708 Primase C terminal 1 (PriCT-1) 185 260 1.5E-14 T 14-10-2018 IPR014820 Primase, C-terminal 1 VV2_0706 a20629214d2b7126cec4ae168534acdc 392 Gene3D G3DSA:1.10.340.50 184 292 2.7E-12 T 14-10-2018 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 14-10-2018 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 SMART SM00354 9 79 3.8E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 SUPERFAMILY SSF53822 67 322 2.08E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_1098 1be2aaca898eca32406feb659bb99de8 335 Gene3D G3DSA:1.10.260.40 1 67 8.6E-18 T 14-10-2018 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 SUPERFAMILY SSF47413 9 67 8.04E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 2.8E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 Gene3D G3DSA:3.40.50.2300 70 311 1.3E-66 T 14-10-2018 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 3.0E-29 T 14-10-2018 VV1_1098 1be2aaca898eca32406feb659bb99de8 335 Gene3D G3DSA:3.40.50.2300 167 295 1.3E-66 T 14-10-2018 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 142 2.8E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 SUPERFAMILY SSF63882 191 362 1.19E-46 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 5.6E-32 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 6.7E-38 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Gene3D G3DSA:2.170.190.11 236 327 4.3E-133 T 14-10-2018 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Gene3D G3DSA:3.90.105.10 213 360 4.3E-133 T 14-10-2018 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Gene3D G3DSA:2.20.25.120 53 85 2.5E-56 T 14-10-2018 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 9.3E-21 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 SUPERFAMILY SSF52540 8 169 7.1E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 SUPERFAMILY SSF63867 512 590 1.44E-22 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Gene3D G3DSA:3.40.980.10 361 512 4.3E-133 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 166 3.2E-43 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 PIRSF PIRSF036618 1 592 0.0 T 14-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Gene3D G3DSA:2.40.340.10 513 583 4.3E-133 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 SUPERFAMILY SSF53218 363 508 5.23E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Pfam PF00994 Probable molybdopterin binding domain 366 502 3.7E-26 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 Gene3D G3DSA:3.40.50.300 10 165 2.5E-56 T 14-10-2018 VV1_2572 cd191ec4a8efc29b5de1bd152d1d3be0 592 SMART SM00852 366 503 9.6E-40 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 3.1E-104 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 Gene3D G3DSA:3.40.50.20 1 80 2.2E-17 T 14-10-2018 VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 Gene3D G3DSA:3.30.1490.20 102 163 1.2E-17 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.865 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 Gene3D G3DSA:3.30.470.20 164 375 1.3E-72 T 14-10-2018 VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 SUPERFAMILY SSF51246 299 373 1.33E-18 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 SUPERFAMILY SSF56059 92 295 2.3E-57 T 14-10-2018 VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 Pfam PF02222 ATP-grasp domain 101 274 4.4E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VV1_1053 a43fc668fe53f39a519886aecc0fe598 377 SUPERFAMILY SSF52440 1 88 6.47E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_0349 8ae81471f6997183c4d8f2ee66ebf32d 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 3.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0349 8ae81471f6997183c4d8f2ee66ebf32d 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0349 8ae81471f6997183c4d8f2ee66ebf32d 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_2624 c278e070dd63bc5935a29ec6ebf786e1 405 Gene3D G3DSA:1.10.3210.10 126 300 1.3E-8 T 14-10-2018 VV1_2624 c278e070dd63bc5935a29ec6ebf786e1 405 SUPERFAMILY SSF109604 132 278 2.73E-8 T 14-10-2018 VV1_2624 c278e070dd63bc5935a29ec6ebf786e1 405 Pfam PF08668 HDOD domain 137 280 8.1E-6 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VV1_1284 0f73d4119ff3eb34043f789e00b3290e 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.889 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VV1_1284 0f73d4119ff3eb34043f789e00b3290e 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 3.0E-87 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VV1_1284 0f73d4119ff3eb34043f789e00b3290e 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 2.7E-61 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 150 271 2.5E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.4E-68 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 6.7E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF51905 1 322 9.72E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PIRSF PIRSF000350 1 469 5.2E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.30.390.30 346 467 1.3E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 3.0E-149 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 Gene3D G3DSA:3.50.50.60 9 332 2.5E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.8E-41 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 8.8E-41 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 8.8E-41 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.8E-41 T 14-10-2018 VV1_1632 d36fec7e5c9e03de236a2a9a1b7b093f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.8E-41 T 14-10-2018 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 360 370 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 Gene3D G3DSA:3.50.50.60 13 374 1.6E-143 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 Pfam PF01266 FAD dependent oxidoreductase 13 331 2.5E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 355 367 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 2.7E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 494 5.8E-11 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 SUPERFAMILY SSF51905 11 330 8.14E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 SUPERFAMILY SSF54373 234 327 3.14E-7 T 14-10-2018 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 Gene3D G3DSA:3.30.9.10 90 328 1.6E-143 T 14-10-2018 VV1_1785 328a5e027b797ef14ec2075c2b7bc31a 513 Gene3D G3DSA:1.10.8.870 400 469 3.5E-20 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV1_0199 787a69e3bdb9d9b66f2f47f1a8acd313 308 SUPERFAMILY SSF51735 5 301 1.17E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0199 787a69e3bdb9d9b66f2f47f1a8acd313 308 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 7 300 1.7E-102 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 VV1_0199 787a69e3bdb9d9b66f2f47f1a8acd313 308 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 230 6.4E-21 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VV1_0199 787a69e3bdb9d9b66f2f47f1a8acd313 308 Pfam PF08338 Domain of unknown function (DUF1731) 257 303 1.6E-15 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 VV1_0199 787a69e3bdb9d9b66f2f47f1a8acd313 308 Gene3D G3DSA:3.40.50.720 6 308 7.5E-77 T 14-10-2018 VV1_3005 a274cd50f0055967969a42a7bca484e1 267 Pfam PF01063 Amino-transferase class IV 24 247 1.8E-40 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VV1_3005 a274cd50f0055967969a42a7bca484e1 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 3.2E-107 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 VV1_3005 a274cd50f0055967969a42a7bca484e1 267 SUPERFAMILY SSF56752 1 259 1.96E-67 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VV1_3005 a274cd50f0055967969a42a7bca484e1 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VV1_3005 a274cd50f0055967969a42a7bca484e1 267 Gene3D G3DSA:3.30.470.10 1 107 1.3E-27 T 14-10-2018 VV1_3005 a274cd50f0055967969a42a7bca484e1 267 Gene3D G3DSA:3.20.10.10 112 266 3.9E-47 T 14-10-2018 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 6.1E-14 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 SUPERFAMILY SSF54364 1 36 2.48E-13 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 SUPERFAMILY SSF55200 41 129 2.49E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 Gene3D G3DSA:3.30.110.10 34 129 5.2E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 7.5E-36 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 Gene3D G3DSA:3.10.20.80 1 33 2.6E-14 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VV1_2398 bfa544b62b39b03de651aaa7eb8895b6 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 1.4E-57 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 PRINTS PR00313 NodO calcium binding signature 2827 2836 6.6E-7 T 14-10-2018 VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 PRINTS PR00313 NodO calcium binding signature 2809 2817 6.6E-7 T 14-10-2018 VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 PRINTS PR00313 NodO calcium binding signature 2818 2826 6.6E-7 T 14-10-2018 VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 PRINTS PR00313 NodO calcium binding signature 2797 2808 6.6E-7 T 14-10-2018 VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 ProSitePatterns PS00018 EF-hand calcium-binding domain. 896 908 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 SUPERFAMILY SSF51120 2566 2915 1.09E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2805 2823 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2814 2832 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1205 1217 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.150.10.10 2774 2931 1.4E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 SUPERFAMILY SSF53300 2445 2630 7.79E-11 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 325 408 1.8E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 493 576 3.3E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 152 240 1.9E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 409 492 6.8E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 241 324 6.1E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.150.10.10 2158 2303 5.2E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1102 1114 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 1196 1293 2.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 577 675 5.1E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 990 1087 2.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 1297 1414 1.4E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 1093 1190 2.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 783 882 7.7E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 887 984 2.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Gene3D G3DSA:2.60.40.10 681 780 7.1E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2796 2814 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 ProSitePatterns PS00018 EF-hand calcium-binding domain. 999 1011 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Pfam PF12245 Bacterial Ig-like domain (group 3) 1374 1402 4.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Pfam PF12245 Bacterial Ig-like domain (group 3) 1164 1182 0.04 T 14-10-2018 IPR022038 Bacterial Ig-like domain VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Pfam PF12245 Bacterial Ig-like domain (group 3) 958 976 0.04 T 14-10-2018 IPR022038 Bacterial Ig-like domain VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Pfam PF12245 Bacterial Ig-like domain (group 3) 1267 1285 0.04 T 14-10-2018 IPR022038 Bacterial Ig-like domain VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 Pfam PF12245 Bacterial Ig-like domain (group 3) 1061 1079 0.04 T 14-10-2018 IPR022038 Bacterial Ig-like domain VV1_2715 40a51fbcf84a0142a4f41aa4bbcee837 2937 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 2844 2934 8.5E-7 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VV2_1013 4223117cf8ce4f8fe970136a6c97ff1d 665 Gene3D G3DSA:1.10.3470.10 354 665 2.8E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1013 4223117cf8ce4f8fe970136a6c97ff1d 665 Gene3D G3DSA:1.10.3470.10 13 341 3.8E-77 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1013 4223117cf8ce4f8fe970136a6c97ff1d 665 SUPERFAMILY SSF81345 352 665 4.71E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1013 4223117cf8ce4f8fe970136a6c97ff1d 665 SUPERFAMILY SSF81345 17 336 5.36E-64 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1013 4223117cf8ce4f8fe970136a6c97ff1d 665 Pfam PF01032 FecCD transport family 369 665 3.8E-68 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VV2_1013 4223117cf8ce4f8fe970136a6c97ff1d 665 Pfam PF01032 FecCD transport family 29 336 1.4E-72 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VV2_1018 f2d13b53b64162965c0a37a2455da60a 397 Pfam PF01979 Amidohydrolase family 55 383 9.5E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VV2_1018 f2d13b53b64162965c0a37a2455da60a 397 Gene3D G3DSA:3.20.20.140 58 354 8.3E-125 T 14-10-2018 VV2_1018 f2d13b53b64162965c0a37a2455da60a 397 Gene3D G3DSA:2.30.40.10 13 381 8.3E-125 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_1018 f2d13b53b64162965c0a37a2455da60a 397 SUPERFAMILY SSF51338 9 385 2.33E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_1018 f2d13b53b64162965c0a37a2455da60a 397 SUPERFAMILY SSF51556 58 354 7.4E-98 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV2_1018 f2d13b53b64162965c0a37a2455da60a 397 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 11 380 2.4E-93 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VV2_1018 f2d13b53b64162965c0a37a2455da60a 397 PIRSF PIRSF038994 5 387 2.7E-122 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VV1_1967 f5c95431b5309b3b120d69701a957a1a 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV1_1967 f5c95431b5309b3b120d69701a957a1a 184 Pfam PF08534 Redoxin 41 164 1.1E-27 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VV1_1967 f5c95431b5309b3b120d69701a957a1a 184 Gene3D G3DSA:3.40.30.10 19 184 4.2E-45 T 14-10-2018 VV1_1967 f5c95431b5309b3b120d69701a957a1a 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 2.6E-72 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VV1_1967 f5c95431b5309b3b120d69701a957a1a 184 SUPERFAMILY SSF52833 46 178 5.0E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 Pfam PF00005 ABC transporter 20 161 1.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 SMART SM00382 28 211 8.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 SUPERFAMILY SSF50331 236 361 2.92E-31 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:2.40.50.100 239 361 1.3E-49 T 14-10-2018 VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 SUPERFAMILY SSF52540 4 243 3.51E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 Pfam PF08402 TOBE domain 281 353 9.6E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:3.40.50.300 1 238 5.8E-75 T 14-10-2018 VV2_1584 e805b93fcbbb52c1c7f191b6222c3610 371 Gene3D G3DSA:2.40.50.140 287 344 1.3E-49 T 14-10-2018 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 9.0E-183 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.85 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 SUPERFAMILY SSF51412 6 334 2.22E-100 T 14-10-2018 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 336 1.3E-81 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 PIRSF PIRSF000235 1 348 1.1E-193 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 Gene3D G3DSA:3.20.20.70 1 345 1.3E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0712 f87caa85aaf11c96fd4ded2c7159c861 348 SMART SM01240 7 344 9.7E-139 T 14-10-2018 VV1_0798 3ff4fa1ff62469840d94bcf43663d87a 352 Gene3D G3DSA:3.40.50.2000 2 150 1.2E-55 T 14-10-2018 VV1_0798 3ff4fa1ff62469840d94bcf43663d87a 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 2.5E-72 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VV1_0798 3ff4fa1ff62469840d94bcf43663d87a 352 SUPERFAMILY SSF53756 3 344 4.24E-98 T 14-10-2018 VV1_0798 3ff4fa1ff62469840d94bcf43663d87a 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 344 4.8E-149 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VV1_0798 3ff4fa1ff62469840d94bcf43663d87a 352 Gene3D G3DSA:3.40.50.2000 166 346 3.8E-59 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.928 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF00204 DNA gyrase B 218 384 2.0E-42 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 SMART SM00387 27 173 7.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.30.230.10 216 389 1.2E-57 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 8.2E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.8E-123 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.30.565.10 2 215 5.5E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF55874 5 215 8.75E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF54211 217 382 1.65E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 SMART SM00433 34 622 2.7E-212 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 SUPERFAMILY SSF56719 388 619 1.67E-79 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-57 T 14-10-2018 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Gene3D G3DSA:3.40.50.670 390 621 2.6E-92 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0606 fbab8d9692e9e2a7085e2422d42da5c0 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 14-10-2018 IPR006171 TOPRIM domain VV1_1273 04af7342727beae7ae8c3c8923f020a7 317 SUPERFAMILY SSF64182 5 316 4.71E-41 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 Gene3D G3DSA:3.30.450.20 238 359 9.1E-7 T 14-10-2018 VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 Pfam PF13426 PAS domain 259 352 0.053 T 14-10-2018 IPR000014 PAS domain VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 Pfam PF13426 PAS domain 412 466 0.15 T 14-10-2018 IPR000014 PAS domain VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 Pfam PF17152 Periplasmic sensor domain 50 142 1.4E-6 T 14-10-2018 IPR033417 Periplasmic sensor domain CHASE8 VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 Gene3D G3DSA:3.30.70.270 472 639 4.0E-50 T 14-10-2018 VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 Gene3D G3DSA:1.20.1480.50 144 237 4.8E-7 T 14-10-2018 VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 SMART SM00267 467 633 6.3E-47 T 14-10-2018 IPR000160 GGDEF domain VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 629 1.5E-40 T 14-10-2018 IPR000160 GGDEF domain VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 475 631 8.0E-36 T 14-10-2018 IPR000160 GGDEF domain VV2_1462 861fc993fa8eed3e4a5edfe154df8096 639 SUPERFAMILY SSF55073 483 635 1.02E-41 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 SUPERFAMILY SSF53850 89 295 8.69E-41 T 14-10-2018 VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 Gene3D G3DSA:1.10.10.10 1 90 7.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 Pfam PF03466 LysR substrate binding domain 88 294 1.3E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 Gene3D G3DSA:3.40.190.10 92 291 2.7E-54 T 14-10-2018 VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 Gene3D G3DSA:3.40.190.10 164 265 2.7E-54 T 14-10-2018 VV2_0964 4d9ef2415aaf7ddbb09ba19213db3a84 315 SUPERFAMILY SSF46785 4 112 2.87E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 Gene3D G3DSA:3.90.226.10 5 207 7.0E-85 T 14-10-2018 VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 Pfam PF00574 Clp protease 25 205 8.4E-90 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.1E-107 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.494 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 SUPERFAMILY SSF52096 23 207 1.24E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV1_0023 5f8a847fdabff315fe4f29bd1049e1b0 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:1.10.560.10 8 521 1.3E-239 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:3.50.7.10 192 372 1.3E-239 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF52029 185 376 4.49E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 5.4E-96 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.8E-254 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.44 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 3 230 1.02E-67 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 Gene3D G3DSA:3.30.260.10 136 410 1.3E-239 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 SUPERFAMILY SSF48592 373 525 2.44E-31 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VV1_1260 cc9ff9b8a8d25c6c81d6ee3e8f4c3156 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 Gene3D G3DSA:3.40.50.2300 11 143 6.2E-20 T 14-10-2018 VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 SUPERFAMILY SSF46894 145 211 4.42E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 Gene3D G3DSA:1.10.10.10 145 214 3.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 SMART SM00421 152 209 8.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1429 ab3338494e0afd1fd6da17ae9daeeda5 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 4.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_1161 46d26a9cfe850bae6cada45095aa45c8 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 272 2.0E-115 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VV1_1161 46d26a9cfe850bae6cada45095aa45c8 280 Gene3D G3DSA:3.30.70.2350 1 70 2.1E-26 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VV1_1161 46d26a9cfe850bae6cada45095aa45c8 280 Pfam PF01694 Rhomboid family 133 271 1.3E-30 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VV1_1161 46d26a9cfe850bae6cada45095aa45c8 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 4.3E-34 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VV1_1161 46d26a9cfe850bae6cada45095aa45c8 280 Gene3D G3DSA:1.20.1540.10 94 273 1.2E-52 T 14-10-2018 IPR035952 Rhomboid-like superfamily VV1_1161 46d26a9cfe850bae6cada45095aa45c8 280 SUPERFAMILY SSF144091 96 275 8.24E-42 T 14-10-2018 VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 SUPERFAMILY SSF109604 181 400 4.39E-43 T 14-10-2018 VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 SUPERFAMILY SSF141868 5 193 3.79E-30 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 PIRSF PIRSF003180 1 403 8.8E-171 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 Gene3D G3DSA:1.10.3210.10 197 396 1.9E-20 T 14-10-2018 VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 Pfam PF00563 EAL domain 75 190 7.2E-17 T 14-10-2018 IPR001633 EAL domain VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 Gene3D G3DSA:3.20.20.450 4 196 6.4E-20 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 SMART SM00052 2 195 1.1E-4 T 14-10-2018 IPR001633 EAL domain VV1_2911 b3d55877eb79bda0d4d37826d3c2a26d 404 Pfam PF08668 HDOD domain 205 319 2.4E-12 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 Gene3D G3DSA:3.90.110.10 147 310 6.8E-54 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.802 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 Gene3D G3DSA:3.40.50.720 1 146 4.4E-66 T 14-10-2018 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 5.1E-130 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 PIRSF PIRSF000102 1 306 1.9E-62 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 SUPERFAMILY SSF56327 146 309 2.01E-41 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 5.4E-47 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 SUPERFAMILY SSF51735 1 145 2.7E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0673 98a2df33aee35b7fe7ef83bbb7795e17 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 3.5E-48 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VV1_2885 03db29d82e9b011bacd6341cc696e772 261 SMART SM00382 38 227 2.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2885 03db29d82e9b011bacd6341cc696e772 261 Pfam PF00005 ABC transporter 30 178 3.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2885 03db29d82e9b011bacd6341cc696e772 261 Gene3D G3DSA:3.40.50.300 1 259 2.8E-69 T 14-10-2018 VV1_2885 03db29d82e9b011bacd6341cc696e772 261 SUPERFAMILY SSF52540 3 252 1.62E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2014 e95dc7b0b5d2b1569f2fcd14c28b7132 145 PIRSF PIRSF006173 1 144 1.4E-64 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VV1_2014 e95dc7b0b5d2b1569f2fcd14c28b7132 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 2.0E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VV1_2014 e95dc7b0b5d2b1569f2fcd14c28b7132 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 40.423 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VV2_0194 a908de06fe458745ad087e6183bc0304 356 Gene3D G3DSA:2.40.50.100 57 189 1.3E-61 T 14-10-2018 VV2_0194 a908de06fe458745ad087e6183bc0304 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 350 1.4E-55 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV2_0194 a908de06fe458745ad087e6183bc0304 356 Gene3D G3DSA:2.40.420.20 272 348 1.3E-61 T 14-10-2018 VV2_0194 a908de06fe458745ad087e6183bc0304 356 Pfam PF13533 Biotin-lipoyl like 57 104 6.6E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_0194 a908de06fe458745ad087e6183bc0304 356 Pfam PF13437 HlyD family secretion protein 155 261 1.0E-6 T 14-10-2018 VV2_0194 a908de06fe458745ad087e6183bc0304 356 Gene3D G3DSA:1.10.287.470 91 149 1.3E-61 T 14-10-2018 VV2_0194 a908de06fe458745ad087e6183bc0304 356 Gene3D G3DSA:2.40.30.170 43 271 1.3E-61 T 14-10-2018 VV2_0194 a908de06fe458745ad087e6183bc0304 356 SUPERFAMILY SSF111369 46 269 2.22E-24 T 14-10-2018 VV1_0017 46cac86b2fe00358700a545d4696f081 100 Gene3D G3DSA:1.10.150.280 27 99 1.2E-21 T 14-10-2018 VV1_0017 46cac86b2fe00358700a545d4696f081 100 Pfam PF12836 Helix-hairpin-helix motif 38 98 2.5E-22 T 14-10-2018 VV1_0017 46cac86b2fe00358700a545d4696f081 100 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 38 99 6.9E-27 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VV1_0017 46cac86b2fe00358700a545d4696f081 100 SUPERFAMILY SSF47781 34 98 2.22E-25 T 14-10-2018 IPR010994 RuvA domain 2-like VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 711 2.3E-128 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 Gene3D G3DSA:2.40.170.20 166 711 4.1E-80 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 SUPERFAMILY SSF56935 25 711 2.18E-109 T 14-10-2018 VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 694 711 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 1.8E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 Pfam PF00593 TonB dependent receptor 233 710 1.4E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 711 2.5E-126 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VV2_1549 1296d87b3c30a73eb2623928a0e8cdc6 711 Gene3D G3DSA:2.170.130.10 28 155 2.4E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VV1_0842 504a6d0cb0dacd841043aae890dd5fe6 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 167 1.4E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV1_0842 504a6d0cb0dacd841043aae890dd5fe6 862 Gene3D G3DSA:2.170.130.10 31 171 1.3E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VV1_0842 504a6d0cb0dacd841043aae890dd5fe6 862 SUPERFAMILY SSF56935 37 862 3.66E-94 T 14-10-2018 VV1_0842 504a6d0cb0dacd841043aae890dd5fe6 862 Gene3D G3DSA:2.40.170.20 227 862 5.9E-56 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV1_0842 504a6d0cb0dacd841043aae890dd5fe6 862 Pfam PF00593 TonB dependent receptor 339 860 1.5E-47 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 SUPERFAMILY SSF89550 5 263 1.08E-13 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 SUPERFAMILY SSF50249 978 1066 5.31E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 Gene3D G3DSA:3.20.20.140 1 270 1.4E-91 T 14-10-2018 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.5E-32 T 14-10-2018 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 Gene3D G3DSA:2.40.50.140 984 1072 1.8E-8 T 14-10-2018 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 Pfam PF02811 PHP domain 8 171 8.5E-43 T 14-10-2018 IPR004013 PHP domain GO:0003824 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 3.0E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 7.7E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.3E-175 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1875 1b7e05d11cc89a1a3bc34f5b14354869 1159 SMART SM00481 7 74 2.1E-26 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 8.7E-132 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.828 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 PIRSF PIRSF000166 2 305 5.7E-129 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 SUPERFAMILY SSF102886 5 305 7.85E-138 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 Gene3D G3DSA:3.40.1500.10 1 305 2.1E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 PRINTS PR00073 Coprogen oxidase signature 31 47 6.3E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 PRINTS PR00073 Coprogen oxidase signature 166 195 6.3E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 PRINTS PR00073 Coprogen oxidase signature 238 265 6.3E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 PRINTS PR00073 Coprogen oxidase signature 94 118 6.3E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 PRINTS PR00073 Coprogen oxidase signature 266 292 6.3E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_1056 b46e20c9db4cb10a6abd98ac0d9d1e08 305 PRINTS PR00073 Coprogen oxidase signature 129 151 6.3E-69 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VV1_0428 4b567436a56f249173762c01ac2f1125 316 Pfam PF13413 Helix-turn-helix domain 25 83 6.9E-18 T 14-10-2018 VV1_0428 4b567436a56f249173762c01ac2f1125 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 2.6E-23 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 VV1_0428 4b567436a56f249173762c01ac2f1125 316 SUPERFAMILY SSF47413 17 93 9.48E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_0428 4b567436a56f249173762c01ac2f1125 316 Gene3D G3DSA:1.10.260.40 11 120 8.6E-23 T 14-10-2018 VV2_0699 e9449e13f77358372a20b92426224595 326 SUPERFAMILY SSF90002 232 324 3.53E-17 T 14-10-2018 VV2_0699 e9449e13f77358372a20b92426224595 326 Gene3D G3DSA:3.30.1220.10 211 325 3.4E-16 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily VV2_0699 e9449e13f77358372a20b92426224595 326 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 182 1.8E-54 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VV2_0699 e9449e13f77358372a20b92426224595 326 Gene3D G3DSA:3.40.50.300 5 201 1.4E-64 T 14-10-2018 VV2_0699 e9449e13f77358372a20b92426224595 326 SUPERFAMILY SSF52540 6 199 1.87E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0699 e9449e13f77358372a20b92426224595 326 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 232 324 1.9E-18 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VV2_0699 e9449e13f77358372a20b92426224595 326 SMART SM00833 232 325 3.7E-15 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VV2_0155 fed590f5df5f6537873fee03ee829727 320 SUPERFAMILY SSF53300 94 256 1.73E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0155 fed590f5df5f6537873fee03ee829727 320 Pfam PF01882 Protein of unknown function DUF58 58 143 1.8E-21 T 14-10-2018 IPR002881 Domain of unknown function DUF58 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF00072 Response regulator receiver domain 6 115 5.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 SMART SM00448 4 115 5.7E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:1.10.10.60 382 469 2.2E-25 T 14-10-2018 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 SMART SM00382 163 306 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:1.10.8.60 314 381 9.5E-17 T 14-10-2018 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF52540 142 386 4.19E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 6.3E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 469 2.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 2.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF52172 2 188 4.41E-44 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:3.40.50.300 128 313 1.1E-67 T 14-10-2018 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 Gene3D G3DSA:3.40.50.2300 1 124 2.8E-40 T 14-10-2018 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 SUPERFAMILY SSF46689 383 468 9.68E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 468 1.8E-239 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VV1_0892 1c91ce3b4bb257bbc4531e227cec425f 469 Pfam PF00158 Sigma-54 interaction domain 143 309 2.7E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 446 3.7E-168 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 Pfam PF04052 TolB amino-terminal domain 25 126 6.5E-35 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 Gene3D G3DSA:2.120.10.30 184 449 1.1E-98 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 445 51.723 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 Pfam PF07676 WD40-like Beta Propeller Repeat 221 247 1.0E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 Pfam PF07676 WD40-like Beta Propeller Repeat 256 291 1.7E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 Pfam PF07676 WD40-like Beta Propeller Repeat 299 335 2.7E-13 T 14-10-2018 IPR011659 WD40-like Beta Propeller VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 SUPERFAMILY SSF52964 29 180 1.31E-41 T 14-10-2018 VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 SUPERFAMILY SSF69304 175 447 8.76E-58 T 14-10-2018 VV1_2170 53acbc6c7b6b20910df7dc2687329278 449 Gene3D G3DSA:3.40.50.10070 23 182 4.8E-49 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VV1_2792 a50bfe75b724e210d7f8ec5ba0e94470 473 Pfam PF00929 Exonuclease 11 190 3.5E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_2792 a50bfe75b724e210d7f8ec5ba0e94470 473 PIRSF PIRSF000977 1 473 1.1E-197 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VV1_2792 a50bfe75b724e210d7f8ec5ba0e94470 473 Gene3D G3DSA:2.30.30.450 212 350 1.6E-55 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VV1_2792 a50bfe75b724e210d7f8ec5ba0e94470 473 SUPERFAMILY SSF53098 7 471 4.62E-136 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2792 a50bfe75b724e210d7f8ec5ba0e94470 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.2E-103 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VV1_2792 a50bfe75b724e210d7f8ec5ba0e94470 473 Gene3D G3DSA:3.30.420.10 1 199 6.9E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2792 a50bfe75b724e210d7f8ec5ba0e94470 473 Gene3D G3DSA:1.20.1280.70 357 418 1.6E-28 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Gene3D G3DSA:3.30.360.10 625 795 6.3E-120 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 SUPERFAMILY SSF55021 303 381 2.69E-21 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Gene3D G3DSA:3.30.2130.10 302 464 5.1E-44 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 SUPERFAMILY SSF55347 614 797 2.03E-50 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 SUPERFAMILY SSF51735 463 636 1.58E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Gene3D G3DSA:3.40.1160.10 3 295 1.3E-86 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_0545 8cdb02847f9883ababc16d017d97109b 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.6E-26 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Gene3D G3DSA:1.20.120.1320 41 142 1.3E-86 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Gene3D G3DSA:3.40.50.720 467 811 6.3E-120 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 SUPERFAMILY SSF53633 1 298 5.54E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_0545 8cdb02847f9883ababc16d017d97109b 819 SUPERFAMILY SSF55021 383 476 1.66E-20 T 14-10-2018 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.9E-47 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.5E-129 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_0545 8cdb02847f9883ababc16d017d97109b 819 Pfam PF01842 ACT domain 324 378 2.7E-9 T 14-10-2018 IPR002912 ACT domain VV1_0453 562663053e573a526ae505a5c6f10244 202 Gene3D G3DSA:3.40.30.10 1 197 4.1E-73 T 14-10-2018 VV1_0453 562663053e573a526ae505a5c6f10244 202 Pfam PF00578 AhpC/TSA family 4 139 5.4E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV1_0453 562663053e573a526ae505a5c6f10244 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.1E-8 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV1_0453 562663053e573a526ae505a5c6f10244 202 PIRSF PIRSF000239 1 201 4.4E-61 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV1_0453 562663053e573a526ae505a5c6f10244 202 SUPERFAMILY SSF52833 1 194 9.84E-68 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 492 4.1E-21 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 SUPERFAMILY SSF56300 19 327 1.14E-75 T 14-10-2018 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 1.9E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 Gene3D G3DSA:3.90.780.10 330 542 1.9E-30 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 SUPERFAMILY SSF55816 339 547 3.4E-24 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 PRINTS PR01607 Apyrase family signature 230 253 3.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 PRINTS PR01607 Apyrase family signature 257 277 3.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 PRINTS PR01607 Apyrase family signature 203 220 3.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 PRINTS PR01607 Apyrase family signature 26 44 3.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_2771 caba649795ecb2aa613368934f1ac1b9 634 Gene3D G3DSA:3.60.21.10 24 321 1.0E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV1_1486 6189114038a784f60e1e351cb05b2eef 256 Pfam PF04794 YdjC-like protein 6 235 5.4E-51 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like VV1_1486 6189114038a784f60e1e351cb05b2eef 256 SUPERFAMILY SSF88713 4 247 4.89E-67 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV1_1486 6189114038a784f60e1e351cb05b2eef 256 Gene3D G3DSA:3.20.20.370 3 248 7.9E-71 T 14-10-2018 VV1_1486 6189114038a784f60e1e351cb05b2eef 256 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 5 244 37.663 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VV1_1630 1016ffdb10942f964eed9336087a4736 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VV1_1630 1016ffdb10942f964eed9336087a4736 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.9E-4 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_1630 1016ffdb10942f964eed9336087a4736 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 2.8E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_1630 1016ffdb10942f964eed9336087a4736 886 PIRSF PIRSF000156 1 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VV1_1630 1016ffdb10942f964eed9336087a4736 886 Gene3D G3DSA:3.40.50.970 472 705 4.1E-111 T 14-10-2018 VV1_1630 1016ffdb10942f964eed9336087a4736 886 SUPERFAMILY SSF52518 475 700 1.65E-97 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_1630 1016ffdb10942f964eed9336087a4736 886 Gene3D G3DSA:3.40.50.970 55 471 8.1E-133 T 14-10-2018 VV1_1630 1016ffdb10942f964eed9336087a4736 886 SUPERFAMILY SSF52518 56 469 6.11E-140 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_1630 1016ffdb10942f964eed9336087a4736 886 Gene3D G3DSA:3.40.50.920 706 886 1.2E-69 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV1_1630 1016ffdb10942f964eed9336087a4736 886 SUPERFAMILY SSF52922 701 885 1.04E-57 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV1_3076 4913c8bf3f13cecc92fe26505ad27e67 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 128 5.8E-49 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VV1_3076 4913c8bf3f13cecc92fe26505ad27e67 130 PIRSF PIRSF007010 1 130 1.2E-55 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VV1_3076 4913c8bf3f13cecc92fe26505ad27e67 130 Gene3D G3DSA:3.30.300.250 19 129 9.0E-40 T 14-10-2018 VV1_1133 96a481a34e0d70419cb82e8f018ce3c3 201 Pfam PF03942 DTW domain 5 183 2.0E-42 T 14-10-2018 IPR005636 DTW VV1_1133 96a481a34e0d70419cb82e8f018ce3c3 201 SMART SM01144 2 193 4.1E-56 T 14-10-2018 IPR005636 DTW VV1_1871 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Pfam PF07977 FabA-like domain 17 141 1.7E-39 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_1871 2fdb0eb0b60f7bd55d38061cbdf4e589 150 SUPERFAMILY SSF54637 7 146 5.89E-49 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_1871 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Gene3D G3DSA:3.10.129.10 2 150 2.8E-61 T 14-10-2018 VV1_1871 2fdb0eb0b60f7bd55d38061cbdf4e589 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.549 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_1871 2fdb0eb0b60f7bd55d38061cbdf4e589 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.9E-60 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 SUPERFAMILY SSF56300 27 364 1.14E-86 T 14-10-2018 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 Gene3D G3DSA:3.90.780.10 414 597 3.5E-49 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 ProSitePatterns PS00786 5'-nucleotidase signature 2. 119 130 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 558 1.6E-18 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 33 657 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 Gene3D G3DSA:3.60.21.10 26 364 9.0E-137 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV1_0728 0fee7865afb8606c0e954e259be5266e 657 SUPERFAMILY SSF55816 365 607 1.57E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 PRINTS PR01607 Apyrase family signature 32 50 4.2E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 PRINTS PR01607 Apyrase family signature 540 559 4.2E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 PRINTS PR01607 Apyrase family signature 438 461 4.2E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 PRINTS PR01607 Apyrase family signature 225 242 4.2E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 PRINTS PR01607 Apyrase family signature 253 276 4.2E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 PRINTS PR01607 Apyrase family signature 293 313 4.2E-30 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0728 0fee7865afb8606c0e954e259be5266e 657 Pfam PF00149 Calcineurin-like phosphoesterase 34 269 7.9E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV1_1942 d67282e3477ed193a02037ec3685e49d 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.8E-16 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VV1_1942 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF101801 247 322 3.53E-13 T 14-10-2018 IPR036429 SpoA-like superfamily VV1_1942 d67282e3477ed193a02037ec3685e49d 347 SUPERFAMILY SSF103039 4 230 5.75E-21 T 14-10-2018 IPR028976 CheC-like superfamily VV1_1942 d67282e3477ed193a02037ec3685e49d 347 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 1.8E-121 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV1_1942 d67282e3477ed193a02037ec3685e49d 347 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 14-10-2018 IPR028976 CheC-like superfamily VV1_1942 d67282e3477ed193a02037ec3685e49d 347 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV1_1942 d67282e3477ed193a02037ec3685e49d 347 PIRSF PIRSF002888 1 328 9.6E-90 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV1_1942 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV1_1942 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV1_1942 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV1_1942 d67282e3477ed193a02037ec3685e49d 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VV1_0525 85015549800db911e247b36d5efb51be 444 Pfam PF00158 Sigma-54 interaction domain 146 305 8.7E-34 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_0525 85015549800db911e247b36d5efb51be 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 5.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_0525 85015549800db911e247b36d5efb51be 444 SMART SM00382 166 303 0.0054 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0525 85015549800db911e247b36d5efb51be 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_0525 85015549800db911e247b36d5efb51be 444 SUPERFAMILY SSF46689 351 438 2.69E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0525 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:1.10.10.60 387 440 9.5E-13 T 14-10-2018 VV1_0525 85015549800db911e247b36d5efb51be 444 SUPERFAMILY SSF52540 146 379 7.07E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0525 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:1.10.8.60 312 382 3.1E-23 T 14-10-2018 VV1_0525 85015549800db911e247b36d5efb51be 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_0525 85015549800db911e247b36d5efb51be 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_0525 85015549800db911e247b36d5efb51be 444 Gene3D G3DSA:3.40.50.300 145 310 2.6E-35 T 14-10-2018 VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 Pfam PF01794 Ferric reductase like transmembrane component 43 179 2.5E-20 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 Pfam PF00175 Oxidoreductase NAD-binding domain 327 419 7.8E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 Pfam PF08022 FAD-binding domain 229 315 1.0E-8 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 Gene3D G3DSA:3.40.50.80 319 443 2.2E-16 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 Gene3D G3DSA:2.40.30.10 219 314 8.0E-15 T 14-10-2018 VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 325 344 2.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 254 266 2.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 PRINTS PR00410 Phenol hydroxylase reductase family signature 407 415 2.8E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 SUPERFAMILY SSF63380 229 316 9.08E-16 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV2_0858 32cd189dbc1ddd3dba0af2fcb2e23dfc 443 SUPERFAMILY SSF52343 316 440 2.49E-20 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 SUPERFAMILY SSF49303 613 706 2.59E-19 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 6.1E-115 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 SUPERFAMILY SSF49785 2 206 1.7E-62 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 SUPERFAMILY SSF74650 715 1001 9.52E-88 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 SUPERFAMILY SSF51445 321 599 7.98E-85 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 207 3.7E-48 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 SMART SM01038 728 999 4.2E-129 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 SUPERFAMILY SSF49303 209 319 8.84E-25 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 7.2E-18 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 3.9E-13 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Pfam PF02929 Beta galactosidase small chain 730 998 5.2E-71 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Gene3D G3DSA:2.70.98.10 733 1004 5.7E-83 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Gene3D G3DSA:2.60.120.260 1 207 3.5E-74 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 4.7E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 4.7E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 4.7E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 4.7E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 4.7E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Gene3D G3DSA:2.60.40.10 603 706 1.2E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Gene3D G3DSA:2.60.40.10 208 319 2.4E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1767 8de4d9bd089e744791ae11d1e13c7caf 1032 Gene3D G3DSA:3.20.20.80 320 600 4.4E-102 T 14-10-2018 VV1_0126 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Gene3D G3DSA:1.10.10.10 126 222 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0126 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 SUPERFAMILY SSF52172 1 167 8.11E-38 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0126 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 SMART SM00862 146 220 3.6E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0126 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Gene3D G3DSA:3.40.50.2300 1 124 3.4E-36 T 14-10-2018 VV1_0126 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Pfam PF00072 Response regulator receiver domain 3 112 3.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0126 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0126 0e5ac0f17d7a4361b3aa875b4c76a2c7 222 SMART SM00448 1 113 6.2E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1200 6edc141c52217640b5a79cf530aae1b0 307 Gene3D G3DSA:3.40.50.300 1 307 2.2E-92 T 14-10-2018 VV1_1200 6edc141c52217640b5a79cf530aae1b0 307 SUPERFAMILY SSF52540 3 307 4.3E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1200 6edc141c52217640b5a79cf530aae1b0 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 232 3.5E-12 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VV1_1200 6edc141c52217640b5a79cf530aae1b0 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 4.3E-146 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VV1_1200 6edc141c52217640b5a79cf530aae1b0 307 PIRSF PIRSF000545 1 307 3.9E-149 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VV1_1200 6edc141c52217640b5a79cf530aae1b0 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 177.179 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VV2_1072 ee184c29e6f2a9a67fbbaa23af733a1e 209 Gene3D G3DSA:3.20.20.70 1 209 5.6E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1072 ee184c29e6f2a9a67fbbaa23af733a1e 209 SUPERFAMILY SSF51569 4 208 2.2E-67 T 14-10-2018 VV2_1072 ee184c29e6f2a9a67fbbaa23af733a1e 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV2_1072 ee184c29e6f2a9a67fbbaa23af733a1e 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV2_1072 ee184c29e6f2a9a67fbbaa23af733a1e 209 Pfam PF01081 KDPG and KHG aldolase 4 198 1.2E-78 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV2_1072 ee184c29e6f2a9a67fbbaa23af733a1e 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 5.8E-83 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 SUPERFAMILY SSF52210 239 385 9.42E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 PIRSF PIRSF001554 1 388 3.7E-155 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.431 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.8E-174 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 Pfam PF00549 CoA-ligase 262 382 1.2E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 SUPERFAMILY SSF56059 1 238 1.77E-79 T 14-10-2018 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.30.470.20 1 234 4.3E-92 T 14-10-2018 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.40.50.261 240 388 8.0E-58 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 Gene3D G3DSA:3.30.1490.20 21 104 4.3E-92 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_0155 aa7eef59fd434c8c2fd6420efe697e38 388 Pfam PF08442 ATP-grasp domain 2 203 2.6E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_1881 b9e77e991c6f7fae382945111338cbff 229 Pfam PF06930 Protein of unknown function (DUF1282) 14 224 1.4E-58 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 VV1_2370 79b56ed257e20f4e885f3c195feffb94 327 SUPERFAMILY SSF46589 14 99 1.2E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VV1_2370 79b56ed257e20f4e885f3c195feffb94 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.2E-106 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VV1_2370 79b56ed257e20f4e885f3c195feffb94 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.9E-112 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VV1_2370 79b56ed257e20f4e885f3c195feffb94 327 Gene3D G3DSA:3.30.930.10 7 327 3.6E-127 T 14-10-2018 VV1_2370 79b56ed257e20f4e885f3c195feffb94 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.332 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VV1_2370 79b56ed257e20f4e885f3c195feffb94 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.4E-25 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VV1_2370 79b56ed257e20f4e885f3c195feffb94 327 SUPERFAMILY SSF55681 92 327 5.97E-83 T 14-10-2018 VV2_0092 8ca97cd3892a00e0b2c3395a4eddf0f2 382 Pfam PF13432 Tetratricopeptide repeat 90 148 2.2E-5 T 14-10-2018 VV2_0092 8ca97cd3892a00e0b2c3395a4eddf0f2 382 Gene3D G3DSA:1.25.40.10 23 259 4.3E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0092 8ca97cd3892a00e0b2c3395a4eddf0f2 382 SUPERFAMILY SSF48452 57 212 1.28E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 Gene3D G3DSA:3.40.140.10 36 186 1.9E-43 T 14-10-2018 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 36 302 7.2E-101 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 164 284 2.5E-44 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 Hamap MF_01558 Cytidine deaminase [cdd]. 8 300 51.183 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 67 147 3.1E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 SUPERFAMILY SSF53927 159 297 1.38E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 SUPERFAMILY SSF53927 8 154 3.68E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 PIRSF PIRSF006334 21 302 1.2E-112 T 14-10-2018 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 Gene3D G3DSA:3.40.140.10 187 302 2.7E-29 T 14-10-2018 VV1_2379 2d603d5cd5f4499d95d245d07aba802f 302 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 109 143 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV1_0820 bfed14f26e7b6e267865a2481c0257df 658 SUPERFAMILY SSF53649 296 589 5.23E-25 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_0820 bfed14f26e7b6e267865a2481c0257df 658 Pfam PF00884 Sulfatase 282 572 9.4E-22 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV1_0820 bfed14f26e7b6e267865a2481c0257df 658 Gene3D G3DSA:3.40.720.10 276 583 5.5E-34 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_3011 908e3650f49f4d2943119f61336b1924 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 1.6E-142 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV1_3011 908e3650f49f4d2943119f61336b1924 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.567 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV1_3011 908e3650f49f4d2943119f61336b1924 316 Gene3D G3DSA:3.40.47.10 1 316 4.4E-126 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_3011 908e3650f49f4d2943119f61336b1924 316 SUPERFAMILY SSF53901 3 316 1.55E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_3011 908e3650f49f4d2943119f61336b1924 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 6.8E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV1_3011 908e3650f49f4d2943119f61336b1924 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 183 3.0E-30 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV1_1004 7e86773070c4488000347add6c4bad2f 46 Pfam PF00468 Ribosomal protein L34 3 45 5.3E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1004 7e86773070c4488000347add6c4bad2f 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 41 4.0E-14 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1004 7e86773070c4488000347add6c4bad2f 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.38 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1004 7e86773070c4488000347add6c4bad2f 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 5.6E-26 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1004 7e86773070c4488000347add6c4bad2f 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1736 21bb00fa0a895bd9f246026a9f6285c8 307 Gene3D G3DSA:3.40.50.1000 109 279 7.7E-22 T 14-10-2018 IPR023214 HAD superfamily VV1_1736 21bb00fa0a895bd9f246026a9f6285c8 307 SUPERFAMILY SSF56784 35 248 5.61E-14 T 14-10-2018 IPR036412 HAD-like superfamily VV1_1736 21bb00fa0a895bd9f246026a9f6285c8 307 Pfam PF12710 haloacid dehalogenase-like hydrolase 40 232 1.5E-12 T 14-10-2018 VV1_1603 3d62ba47081c99f8b5ec7fb2cba93f10 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 3.7E-20 T 14-10-2018 VV1_1603 3d62ba47081c99f8b5ec7fb2cba93f10 316 SMART SM00829 12 312 3.7E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VV1_1603 3d62ba47081c99f8b5ec7fb2cba93f10 316 Gene3D G3DSA:3.40.50.720 133 263 5.8E-93 T 14-10-2018 VV1_1603 3d62ba47081c99f8b5ec7fb2cba93f10 316 SUPERFAMILY SSF51735 122 246 3.2E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1603 3d62ba47081c99f8b5ec7fb2cba93f10 316 Gene3D G3DSA:3.90.180.10 10 310 5.8E-93 T 14-10-2018 VV1_1603 3d62ba47081c99f8b5ec7fb2cba93f10 316 SUPERFAMILY SSF50129 4 154 3.65E-35 T 14-10-2018 IPR011032 GroES-like superfamily VV1_1603 3d62ba47081c99f8b5ec7fb2cba93f10 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 3.8E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 Gene3D G3DSA:1.10.10.60 163 272 9.6E-25 T 14-10-2018 VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 Pfam PF12852 Cupin 2 153 5.1E-21 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 Pfam PF12833 Helix-turn-helix domain 190 266 1.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF51215 31 150 3.4E-7 T 14-10-2018 IPR037923 Transcription regulator HTH-like VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 SMART SM00342 184 266 8.0E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF46689 220 265 5.82E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2208 240578cf8980ab78c603e0909d9e63c6 279 SUPERFAMILY SSF46689 167 218 1.75E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 SUPERFAMILY SSF141868 535 786 1.7E-83 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 Gene3D G3DSA:3.20.20.450 532 787 2.6E-88 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 Pfam PF14827 Double sensory domain of two-component sensor kinase 47 202 1.4E-10 T 14-10-2018 IPR029150 Double Cache domain 3 VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 SMART SM00267 351 519 4.3E-44 T 14-10-2018 IPR000160 GGDEF domain VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 519 2.5E-29 T 14-10-2018 IPR000160 GGDEF domain VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 SMART SM00052 529 774 2.5E-96 T 14-10-2018 IPR001633 EAL domain VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 Gene3D G3DSA:1.20.1480.50 270 359 1.2E-15 T 14-10-2018 VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 Pfam PF00563 EAL domain 535 769 9.4E-71 T 14-10-2018 IPR001633 EAL domain VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 SUPERFAMILY SSF158472 304 353 7.06E-12 T 14-10-2018 VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 Gene3D G3DSA:3.30.70.270 360 531 1.1E-44 T 14-10-2018 VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 Pfam PF00672 HAMP domain 303 353 3.0E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 514 1.4E-35 T 14-10-2018 IPR000160 GGDEF domain VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 SUPERFAMILY SSF55073 367 519 8.63E-34 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0556 c650c442f7d7946309f78c3a2cabf688 797 SMART SM00304 303 356 2.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 SUPERFAMILY SSF88946 53 161 1.38E-45 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Gene3D G3DSA:1.10.10.10 164 239 6.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 PRINTS PR00046 Major sigma-70 factor signature 263 275 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 PRINTS PR00046 Major sigma-70 factor signature 139 147 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 PRINTS PR00046 Major sigma-70 factor signature 284 299 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 PRINTS PR00046 Major sigma-70 factor signature 115 128 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 PRINTS PR00046 Major sigma-70 factor signature 299 310 6.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 284 310 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 87 313 1.9E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 325 2.7E-138 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Pfam PF00140 Sigma-70 factor, region 1.2 53 86 4.1E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Pfam PF04542 Sigma-70 region 2 91 160 6.9E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 SUPERFAMILY SSF88659 221 320 2.62E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Gene3D G3DSA:1.10.601.10 4 160 1.5E-47 T 14-10-2018 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 15 325 39.578 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 SUPERFAMILY SSF88659 164 237 3.49E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Pfam PF04545 Sigma-70, region 4 259 312 1.1E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Gene3D G3DSA:1.10.10.10 241 321 7.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 Pfam PF04539 Sigma-70 region 3 171 244 3.4E-22 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VV1_1588 9512ac96ef9fa08ee789aa9647667c8f 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 115 128 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_2824 70025b41c507a7f9b7db371371c3ee22 553 SUPERFAMILY SSF53383 27 527 6.8E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2824 70025b41c507a7f9b7db371371c3ee22 553 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.8E-294 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VV1_2824 70025b41c507a7f9b7db371371c3ee22 553 Gene3D G3DSA:3.40.640.10 122 387 3.0E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2824 70025b41c507a7f9b7db371371c3ee22 553 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 442 7.0E-57 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VV1_2824 70025b41c507a7f9b7db371371c3ee22 553 Gene3D G3DSA:3.90.1150.170 56 523 3.0E-111 T 14-10-2018 VV1_0450 5e4c0961c0c2646c3ddc673107eac7d2 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 35 544 4.2E-263 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VV1_0450 5e4c0961c0c2646c3ddc673107eac7d2 545 Gene3D G3DSA:3.20.20.360 13 423 2.0E-191 T 14-10-2018 VV1_0450 5e4c0961c0c2646c3ddc673107eac7d2 545 Pfam PF01274 Malate synthase 24 544 1.1E-201 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VV1_0450 5e4c0961c0c2646c3ddc673107eac7d2 545 SUPERFAMILY SSF51645 19 544 3.66E-188 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VV1_0450 5e4c0961c0c2646c3ddc673107eac7d2 545 ProSitePatterns PS00510 Malate synthase signature. 278 293 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VV1_0450 5e4c0961c0c2646c3ddc673107eac7d2 545 PIRSF PIRSF001363 12 545 3.6E-254 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VV1_0450 5e4c0961c0c2646c3ddc673107eac7d2 545 Gene3D G3DSA:1.20.1220.12 424 545 1.7E-49 T 14-10-2018 VV2_0013 01f645c838a85d5674db3626a7f36a7b 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 9.8E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_0013 01f645c838a85d5674db3626a7f36a7b 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 5.6E-19 T 14-10-2018 VV2_0013 01f645c838a85d5674db3626a7f36a7b 203 SUPERFAMILY SSF56784 11 198 3.18E-35 T 14-10-2018 IPR036412 HAD-like superfamily VV2_0013 01f645c838a85d5674db3626a7f36a7b 203 Gene3D G3DSA:1.10.260.80 24 75 4.6E-55 T 14-10-2018 VV2_0013 01f645c838a85d5674db3626a7f36a7b 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 13 165 9.6E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_0013 01f645c838a85d5674db3626a7f36a7b 203 Gene3D G3DSA:3.40.50.1000 12 188 4.6E-55 T 14-10-2018 IPR023214 HAD superfamily VV1_1017 e31540dde49f246c735e61da66b4f2e4 156 SUPERFAMILY SSF81573 63 121 1.57E-14 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VV1_1017 e31540dde49f246c735e61da66b4f2e4 156 Gene3D G3DSA:1.20.5.620 62 122 7.7E-22 T 14-10-2018 VV1_1017 e31540dde49f246c735e61da66b4f2e4 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.448 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VV1_1017 e31540dde49f246c735e61da66b4f2e4 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.9E-59 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VV1_1017 e31540dde49f246c735e61da66b4f2e4 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.9E-36 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VV2_1394 bee44b688661c6c2f1c16a4b6c773578 376 SUPERFAMILY SSF53335 2 375 1.75E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV2_1394 bee44b688661c6c2f1c16a4b6c773578 376 Gene3D G3DSA:3.40.50.150 14 369 7.6E-77 T 14-10-2018 VV2_1394 bee44b688661c6c2f1c16a4b6c773578 376 Gene3D G3DSA:3.40.1350.30 56 212 7.6E-77 T 14-10-2018 VV2_1394 bee44b688661c6c2f1c16a4b6c773578 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 308 339 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VV2_1394 bee44b688661c6c2f1c16a4b6c773578 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 3 375 7.0E-175 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 VV2_1394 bee44b688661c6c2f1c16a4b6c773578 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 209 375 8.0E-21 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VV2_1394 bee44b688661c6c2f1c16a4b6c773578 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 376 81.244 T 14-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.5E-90 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 257 8.9E-114 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 SUPERFAMILY SSF51621 6 436 6.28E-153 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 Pfam PF00463 Isocitrate lyase family 259 436 5.7E-53 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 Pfam PF00463 Isocitrate lyase family 15 257 1.2E-62 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 PIRSF PIRSF001362 1 437 5.6E-224 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VV1_0449 9b2e29ee9b0f8334758dd2a1d2e9dea7 437 Gene3D G3DSA:3.20.20.60 2 419 1.7E-181 T 14-10-2018 VV1_1844 9a5341435ebdc61d2fc25c5fc4658819 287 SMART SM00849 34 272 3.7E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_1844 9a5341435ebdc61d2fc25c5fc4658819 287 Gene3D G3DSA:3.60.15.10 4 285 3.5E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_1844 9a5341435ebdc61d2fc25c5fc4658819 287 Pfam PF00753 Metallo-beta-lactamase superfamily 35 120 9.6E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_1844 9a5341435ebdc61d2fc25c5fc4658819 287 SUPERFAMILY SSF56281 30 274 1.27E-24 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 SUPERFAMILY SSF158544 219 287 1.31E-19 T 14-10-2018 IPR038072 GspK, central domain superfamily VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 Pfam PF03934 Type II secretion system (T2SS), protein K 34 321 6.7E-87 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 Gene3D G3DSA:1.10.40.60 220 289 7.6E-87 T 14-10-2018 IPR038072 GspK, central domain superfamily VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 SUPERFAMILY SSF158544 105 217 1.12E-29 T 14-10-2018 IPR038072 GspK, central domain superfamily VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 SUPERFAMILY SSF54523 40 329 1.54E-35 T 14-10-2018 VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 Gene3D G3DSA:3.30.1300.30 46 313 7.6E-87 T 14-10-2018 VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 Gene3D G3DSA:1.10.40.60 103 219 7.6E-87 T 14-10-2018 IPR038072 GspK, central domain superfamily VV1_0870 94d61ec3db94bf9a7c7967e5f8b84a36 340 PIRSF PIRSF002786 4 332 8.9E-65 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 SMART SM00642 18 419 1.7E-165 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 Gene3D G3DSA:2.60.40.1180 481 561 8.8E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 Gene3D G3DSA:3.90.400.10 112 175 9.5E-31 T 14-10-2018 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 SUPERFAMILY SSF51011 480 559 1.98E-17 T 14-10-2018 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 Gene3D G3DSA:3.20.20.80 176 480 2.2E-115 T 14-10-2018 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 Gene3D G3DSA:3.20.20.80 1 111 2.2E-49 T 14-10-2018 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 5.6E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 1.6E-271 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 6.7E-129 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV1_0288 1bdbd00867bef1d6f4bf4613741e016b 561 SUPERFAMILY SSF51445 9 477 1.83E-164 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_3033 44a674f9ade1f2b6a0515fcceb81f2e4 226 Gene3D G3DSA:3.30.70.20 103 156 5.5E-59 T 14-10-2018 VV1_3033 44a674f9ade1f2b6a0515fcceb81f2e4 226 Gene3D G3DSA:3.30.70.20 42 217 5.5E-59 T 14-10-2018 VV1_3033 44a674f9ade1f2b6a0515fcceb81f2e4 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_3033 44a674f9ade1f2b6a0515fcceb81f2e4 226 Pfam PF13247 4Fe-4S dicluster domain 89 186 4.1E-26 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_3033 44a674f9ade1f2b6a0515fcceb81f2e4 226 SUPERFAMILY SSF54862 40 222 2.51E-63 T 14-10-2018 VV1_3033 44a674f9ade1f2b6a0515fcceb81f2e4 226 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 18 226 9.5E-124 T 14-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VV1_1763 56876db3a9714f2099b6dbd5db7251ca 788 Gene3D G3DSA:3.30.1390.40 485 516 3.3E-256 T 14-10-2018 VV1_1763 56876db3a9714f2099b6dbd5db7251ca 788 Pfam PF01204 Trehalase 578 766 1.9E-9 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 VV1_1763 56876db3a9714f2099b6dbd5db7251ca 788 Gene3D G3DSA:2.70.98.50 29 260 8.9E-97 T 14-10-2018 VV1_1763 56876db3a9714f2099b6dbd5db7251ca 788 Gene3D G3DSA:1.50.10.10 306 784 3.3E-256 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VV1_1763 56876db3a9714f2099b6dbd5db7251ca 788 Gene3D G3DSA:1.10.287.100 261 299 4.8E-20 T 14-10-2018 VV1_1763 56876db3a9714f2099b6dbd5db7251ca 788 SUPERFAMILY SSF48208 301 783 2.57E-83 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VV1_1320 63a4f6cd497fede8795dcb0262ee5949 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 2.5E-34 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VV1_1320 63a4f6cd497fede8795dcb0262ee5949 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.109 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VV1_1320 63a4f6cd497fede8795dcb0262ee5949 70 SUPERFAMILY SSF118001 1 70 1.44E-28 T 14-10-2018 IPR036685 YehU-like superfamily VV1_1320 63a4f6cd497fede8795dcb0262ee5949 70 Gene3D G3DSA:1.10.10.610 1 70 4.2E-30 T 14-10-2018 IPR036685 YehU-like superfamily VV1_1320 63a4f6cd497fede8795dcb0262ee5949 70 PIRSF PIRSF006169 1 70 2.6E-36 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VV1_1320 63a4f6cd497fede8795dcb0262ee5949 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 53 4.0E-24 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 PIRSF PIRSF001220 1 335 3.2E-95 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 Pfam PF00710 Asparaginase, N-terminal 5 191 5.5E-67 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 Gene3D G3DSA:3.40.50.40 210 337 3.4E-46 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 PIRSF PIRSF500176 2 333 2.9E-109 T 14-10-2018 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.4E-118 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 Gene3D G3DSA:3.40.50.1170 1 209 8.1E-93 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 SUPERFAMILY SSF53774 3 336 5.89E-114 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VV1_3135 c0787b10bd71f88aa175e95bfb0eb873 337 SMART SM00870 5 324 5.5E-140 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SMART SM00387 718 834 1.6E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SUPERFAMILY SSF55785 476 589 2.97E-17 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Pfam PF00989 PAS fold 474 582 3.6E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Pfam PF00072 Response regulator receiver domain 994 1104 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Pfam PF00072 Response regulator receiver domain 855 965 1.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SUPERFAMILY SSF55874 660 830 1.7E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Gene3D G3DSA:3.40.50.2300 850 969 2.8E-25 T 14-10-2018 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Gene3D G3DSA:3.30.565.10 670 838 1.5E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 718 830 1.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Gene3D G3DSA:3.40.50.2300 989 1132 1.5E-38 T 14-10-2018 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Pfam PF00512 His Kinase A (phospho-acceptor) domain 606 671 2.9E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SUPERFAMILY SSF52172 989 1110 3.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Gene3D G3DSA:3.30.450.40 297 465 5.9E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SMART SM00091 471 538 7.9E-7 T 14-10-2018 IPR000014 PAS domain VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SMART SM00086 544 586 0.0068 T 14-10-2018 IPR001610 PAC motif VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SUPERFAMILY SSF47384 591 672 1.39E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Gene3D G3DSA:1.20.120.160 1144 1261 3.0E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SUPERFAMILY SSF55781 287 450 1.52E-7 T 14-10-2018 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Pfam PF01627 Hpt domain 1166 1250 2.6E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SUPERFAMILY SSF47226 1087 1228 2.36E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 474 593 1.2E-15 T 14-10-2018 IPR000014 PAS domain VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Gene3D G3DSA:3.30.450.20 467 585 6.0E-18 T 14-10-2018 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 Gene3D G3DSA:1.10.287.130 586 669 2.8E-29 T 14-10-2018 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SUPERFAMILY SSF52172 851 970 6.55E-26 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SMART SM00073 1155 1252 1.2E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 812 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 831 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 8.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SMART SM00448 991 1104 4.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SMART SM00448 852 965 2.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0980 1de45c4f932a00381b10cd5bf4759533 1328 SMART SM00388 606 671 9.2E-27 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1267 49314cb71613e1ee67e151d97df294f2 127 Pfam PF02300 Fumarate reductase subunit C 2 127 7.1E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VV1_1267 49314cb71613e1ee67e151d97df294f2 127 SUPERFAMILY SSF81343 1 127 4.14E-52 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1267 49314cb71613e1ee67e151d97df294f2 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.991 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VV1_1267 49314cb71613e1ee67e151d97df294f2 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-64 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VV1_1267 49314cb71613e1ee67e151d97df294f2 127 Gene3D G3DSA:1.20.1300.10 1 127 3.6E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1267 49314cb71613e1ee67e151d97df294f2 127 PIRSF PIRSF000180 1 127 6.0E-58 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VV2_0341 2e4cf028967974b40f67cd6851e1e392 334 Gene3D G3DSA:2.40.30.170 36 266 3.9E-57 T 14-10-2018 VV2_0341 2e4cf028967974b40f67cd6851e1e392 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 259 2.8E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV2_0341 2e4cf028967974b40f67cd6851e1e392 334 Gene3D G3DSA:1.10.287.470 86 153 3.9E-57 T 14-10-2018 VV2_0341 2e4cf028967974b40f67cd6851e1e392 334 SUPERFAMILY SSF111369 39 267 4.05E-26 T 14-10-2018 VV2_0341 2e4cf028967974b40f67cd6851e1e392 334 Gene3D G3DSA:2.40.50.100 48 188 3.9E-57 T 14-10-2018 VV2_0341 2e4cf028967974b40f67cd6851e1e392 334 Gene3D G3DSA:2.40.420.20 31 324 3.9E-57 T 14-10-2018 VV2_0341 2e4cf028967974b40f67cd6851e1e392 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 326 4.0E-60 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 Gene3D G3DSA:3.10.50.40 171 270 1.5E-69 T 14-10-2018 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 Gene3D G3DSA:1.10.4030.30 25 272 1.5E-69 T 14-10-2018 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 Pfam PF00639 PPIC-type PPIASE domain 284 375 1.7E-21 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 Hamap MF_01183 Chaperone SurA [surA]. 8 423 32.341 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.0E-20 T 14-10-2018 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 SUPERFAMILY SSF54534 172 270 1.05E-24 T 14-10-2018 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 SUPERFAMILY SSF109998 24 197 9.03E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 Pfam PF09312 SurA N-terminal domain 24 141 5.1E-44 T 14-10-2018 IPR015391 SurA N-terminal VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 Gene3D G3DSA:3.10.50.40 275 415 5.5E-38 T 14-10-2018 VV1_0661 41acb3c5e26e415f9cd72b4669bebe14 428 SUPERFAMILY SSF54534 278 380 5.89E-29 T 14-10-2018 VV1_0286 bcd21de3c25c21cd530fd7fa583c92b4 416 PIRSF PIRSF000412 1 416 5.6E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV1_0286 bcd21de3c25c21cd530fd7fa583c92b4 416 SUPERFAMILY SSF53383 6 415 5.44E-185 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_0286 bcd21de3c25c21cd530fd7fa583c92b4 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV1_0286 bcd21de3c25c21cd530fd7fa583c92b4 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 4.2E-183 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV1_0286 bcd21de3c25c21cd530fd7fa583c92b4 416 Gene3D G3DSA:3.90.1150.10 10 395 4.1E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_0286 bcd21de3c25c21cd530fd7fa583c92b4 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.414 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV1_0286 bcd21de3c25c21cd530fd7fa583c92b4 416 Gene3D G3DSA:3.40.640.10 37 288 4.1E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0051 09896fa65fc0d7803eb64e85460ac60f 493 SUPERFAMILY SSF53720 10 452 1.27E-109 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV2_0051 09896fa65fc0d7803eb64e85460ac60f 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VV2_0051 09896fa65fc0d7803eb64e85460ac60f 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 241 252 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VV2_0051 09896fa65fc0d7803eb64e85460ac60f 493 Pfam PF00171 Aldehyde dehydrogenase family 12 437 2.0E-83 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV2_0051 09896fa65fc0d7803eb64e85460ac60f 493 PIRSF PIRSF036492 1 481 1.6E-163 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VV2_0051 09896fa65fc0d7803eb64e85460ac60f 493 Gene3D G3DSA:3.40.309.10 217 418 3.2E-148 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV2_0051 09896fa65fc0d7803eb64e85460ac60f 493 Gene3D G3DSA:3.40.605.10 15 438 3.2E-148 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_2036 f9b7891536294c8f13e71c7eeebd8ef5 428 SUPERFAMILY SSF52540 1 93 8.11E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2036 f9b7891536294c8f13e71c7eeebd8ef5 428 SUPERFAMILY SSF81301 184 268 2.26E-5 T 14-10-2018 VV1_2036 f9b7891536294c8f13e71c7eeebd8ef5 428 Gene3D G3DSA:3.40.50.300 3 145 6.9E-6 T 14-10-2018 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 PIRSF PIRSF039144 3 114 2.9E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 SMART SM00938 6 107 8.5E-70 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 Gene3D G3DSA:3.30.70.120 1 114 3.6E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV1_1879 b35520bfc929594b1a9cc88938a99471 114 SUPERFAMILY SSF54913 3 114 2.38E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV1_1879 b35520bfc929594b1a9cc88938a99471 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.5E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 25 43 5.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 54 77 5.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 85 105 5.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 PRINTS PR00340 P-II protein signature 4 19 5.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1879 b35520bfc929594b1a9cc88938a99471 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 SMART SM00411 1 90 3.7E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 SUPERFAMILY SSF47729 1 90 2.06E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 Gene3D G3DSA:4.10.520.10 1 90 2.2E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_1224 cb962fcecd337369870c2eec928d65ee 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV2_0903 c32b7e79c440caba5fd350e14c1a99b4 687 SMART SM00642 203 646 3.2E-96 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_0903 c32b7e79c440caba5fd350e14c1a99b4 687 PIRSF PIRSF036917 1 685 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VV2_0903 c32b7e79c440caba5fd350e14c1a99b4 687 Pfam PF00128 Alpha amylase, catalytic domain 236 606 2.7E-53 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_0903 c32b7e79c440caba5fd350e14c1a99b4 687 Gene3D G3DSA:3.20.20.80 430 653 1.5E-39 T 14-10-2018 VV2_0903 c32b7e79c440caba5fd350e14c1a99b4 687 Gene3D G3DSA:3.20.20.80 186 426 2.7E-58 T 14-10-2018 VV2_0903 c32b7e79c440caba5fd350e14c1a99b4 687 SUPERFAMILY SSF51445 189 655 3.36E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_2120 0bd5ea38543ca96da78d256df0706480 106 Gene3D G3DSA:3.30.1390.10 1 106 6.3E-45 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV1_2120 0bd5ea38543ca96da78d256df0706480 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 3.7E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VV1_2120 0bd5ea38543ca96da78d256df0706480 106 SUPERFAMILY SSF54736 21 105 6.8E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV1_2120 0bd5ea38543ca96da78d256df0706480 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.258 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VV2_0428 d98b632609f32691af673d1e1226661b 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 333 1.4E-73 T 14-10-2018 VV2_0428 d98b632609f32691af673d1e1226661b 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 513 2.2E-105 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VV2_0428 d98b632609f32691af673d1e1226661b 611 SUPERFAMILY SSF69255 372 460 3.14E-33 T 14-10-2018 VV2_0428 d98b632609f32691af673d1e1226661b 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 531 1.5E-178 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VV2_0428 d98b632609f32691af673d1e1226661b 611 Gene3D G3DSA:2.30.110.50 15 331 7.0E-65 T 14-10-2018 VV2_0428 d98b632609f32691af673d1e1226661b 611 SUPERFAMILY SSF69349 450 601 1.1E-38 T 14-10-2018 VV2_0428 d98b632609f32691af673d1e1226661b 611 SUPERFAMILY SSF69279 209 367 6.12E-11 T 14-10-2018 VV2_0428 d98b632609f32691af673d1e1226661b 611 Gene3D G3DSA:2.40.50.230 363 465 1.5E-42 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VV2_0428 d98b632609f32691af673d1e1226661b 611 SUPERFAMILY SSF69279 13 195 1.93E-41 T 14-10-2018 VV2_0428 d98b632609f32691af673d1e1226661b 611 Gene3D G3DSA:3.55.50.10 109 199 7.0E-65 T 14-10-2018 VV2_0428 d98b632609f32691af673d1e1226661b 611 Gene3D G3DSA:3.30.1920.30 230 293 7.0E-65 T 14-10-2018 VV1_1592 a429f47b74ef347314c16b87b59e05c5 153 Pfam PF02631 RecX family 36 150 4.6E-29 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VV1_1592 a429f47b74ef347314c16b87b59e05c5 153 Gene3D G3DSA:1.10.10.10 104 151 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1592 a429f47b74ef347314c16b87b59e05c5 153 Gene3D G3DSA:1.10.10.10 11 56 2.8E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1592 a429f47b74ef347314c16b87b59e05c5 153 Hamap MF_01114 Regulatory protein RecX [recX]. 11 153 13.429 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VV1_1592 a429f47b74ef347314c16b87b59e05c5 153 Gene3D G3DSA:1.10.10.10 58 101 4.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2655 df2dc2af7e313a188c96f457ae174288 160 Gene3D G3DSA:3.30.70.990 9 94 4.9E-27 T 14-10-2018 IPR035570 UPF0234, N-terminal VV1_2655 df2dc2af7e313a188c96f457ae174288 160 Gene3D G3DSA:3.30.70.860 95 160 2.2E-30 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VV1_2655 df2dc2af7e313a188c96f457ae174288 160 SUPERFAMILY SSF89963 2 85 1.44E-29 T 14-10-2018 IPR036183 YajQ-like superfamily VV1_2655 df2dc2af7e313a188c96f457ae174288 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 4.3E-63 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VV1_2655 df2dc2af7e313a188c96f457ae174288 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.225 T 14-10-2018 IPR007551 Protein of unknown function DUF520 VV1_2655 df2dc2af7e313a188c96f457ae174288 160 SUPERFAMILY SSF89963 88 160 1.83E-28 T 14-10-2018 IPR036183 YajQ-like superfamily VV1_3132 f65975829ad02699753b604ef41157fc 670 SUPERFAMILY SSF51395 4 365 1.18E-107 T 14-10-2018 VV1_3132 f65975829ad02699753b604ef41157fc 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 2.1E-8 T 14-10-2018 VV1_3132 f65975829ad02699753b604ef41157fc 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 2.1E-8 T 14-10-2018 VV1_3132 f65975829ad02699753b604ef41157fc 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 330 7.1E-82 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VV1_3132 f65975829ad02699753b604ef41157fc 670 SUPERFAMILY SSF51971 335 519 5.18E-39 T 14-10-2018 VV1_3132 f65975829ad02699753b604ef41157fc 670 Gene3D G3DSA:3.50.50.60 471 623 2.2E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_3132 f65975829ad02699753b604ef41157fc 670 Gene3D G3DSA:3.20.20.70 4 370 3.7E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_3132 f65975829ad02699753b604ef41157fc 670 Gene3D G3DSA:3.40.50.720 377 664 2.2E-104 T 14-10-2018 VV1_3132 f65975829ad02699753b604ef41157fc 670 SUPERFAMILY SSF51905 373 630 1.53E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_3132 f65975829ad02699753b604ef41157fc 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 628 9.4E-27 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 Gene3D G3DSA:3.40.250.10 384 482 1.6E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.1E-70 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 SUPERFAMILY SSF52402 174 372 1.01E-40 T 14-10-2018 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 220.348 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 SUPERFAMILY SSF52821 401 481 2.49E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 Pfam PF02926 THUMP domain 59 158 1.6E-22 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.7E-42 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 Gene3D G3DSA:3.30.2130.30 1 174 2.4E-32 T 14-10-2018 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 Gene3D G3DSA:3.40.50.620 175 383 6.5E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.6E-110 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 SMART SM00981 75 165 1.9E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 VV1_0310 5098ba39c9ba3e14dc698a1117e694d5 482 SUPERFAMILY SSF143437 1 173 9.77E-47 T 14-10-2018 VV2_1224 440742b3fb86d6299cca127996b23801 1976 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1667 1754 5.8E-21 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VV2_1224 440742b3fb86d6299cca127996b23801 1976 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 324 388 3.2E-8 T 14-10-2018 VV2_1224 440742b3fb86d6299cca127996b23801 1976 SUPERFAMILY SSF69318 212 505 7.06E-25 T 14-10-2018 VV2_1224 440742b3fb86d6299cca127996b23801 1976 Gene3D G3DSA:2.180.10.10 1465 1754 1.4E-31 T 14-10-2018 VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 Gene3D G3DSA:1.25.40.10 4 190 7.2E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 SUPERFAMILY SSF46565 264 320 7.46E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 Pfam PF08238 Sel1 repeat 27 60 0.094 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 Pfam PF08238 Sel1 repeat 99 128 5.5 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 Pfam PF08238 Sel1 repeat 63 96 0.012 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 SMART SM00671 61 96 4.8E-4 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 SMART SM00671 97 132 110.0 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 SMART SM00671 26 60 11.0 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 Gene3D G3DSA:1.10.287.110 254 323 1.7E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily VV1_2381 b9f55505fbaaf67b31d8bcb353b521c6 323 SUPERFAMILY SSF81901 10 133 3.79E-18 T 14-10-2018 VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 Gene3D G3DSA:2.40.50.140 4 67 8.9E-29 T 14-10-2018 VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 PRINTS PR00050 Cold shock protein signature 7 22 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 PRINTS PR00050 Cold shock protein signature 42 60 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 PRINTS PR00050 Cold shock protein signature 27 36 7.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 SMART SM00357 6 69 3.9E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 4.9E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 SUPERFAMILY SSF50249 3 68 8.81E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_0519 9c5d6022174155d7105ccb88ca5aabe1 69 PIRSF PIRSF002599 1 69 2.2E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81593 818 945 1.49E-31 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 279 3.2E-92 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 555 807 2.8E-100 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:1.10.4050.10 9 112 1.4E-12 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:1.20.120.1510 450 563 2.2E-33 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81301 527 817 4.9E-92 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81301 24 289 5.32E-87 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:1.20.120.330 288 443 2.6E-54 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 947 19.782 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:1.20.120.330 814 948 8.5E-42 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF08335 GlnD PII-uridylyltransferase 828 914 7.1E-7 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Pfam PF08335 GlnD PII-uridylyltransferase 300 438 4.1E-45 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 SUPERFAMILY SSF81593 290 439 4.55E-43 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:3.30.460.10 115 287 5.1E-66 T 14-10-2018 VV1_0614 4ac92a307fdad0b365e073a99e7ab0c7 950 Gene3D G3DSA:3.30.460.100 564 813 6.1E-96 T 14-10-2018 VV1_2327 fe43743d45f1e3cd2284ad45c50980dc 967 Pfam PF07603 Protein of unknown function (DUF1566) 845 934 4.7E-9 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 VV1_2327 fe43743d45f1e3cd2284ad45c50980dc 967 SUPERFAMILY SSF49363 680 730 4.71E-7 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 VV1_2327 fe43743d45f1e3cd2284ad45c50980dc 967 Gene3D G3DSA:2.60.40.10 649 740 4.4E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2327 fe43743d45f1e3cd2284ad45c50980dc 967 ProSitePatterns PS00018 EF-hand calcium-binding domain. 456 468 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VV2_1212 f56f12650484f71606a45e4b35fa878a 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 113 6.2E-10 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VV2_1212 f56f12650484f71606a45e4b35fa878a 131 Gene3D G3DSA:2.170.150.70 14 131 1.3E-37 T 14-10-2018 VV2_1212 f56f12650484f71606a45e4b35fa878a 131 SUPERFAMILY SSF51316 9 130 6.28E-33 T 14-10-2018 IPR011057 Mss4-like superfamily VV1_0212 b03d4a597312b87d6ed8743043d67614 169 SUPERFAMILY SSF51261 18 166 1.5E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_0212 b03d4a597312b87d6ed8743043d67614 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VV1_0212 b03d4a597312b87d6ed8743043d67614 169 Gene3D G3DSA:2.70.70.10 9 169 1.0E-61 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_0212 b03d4a597312b87d6ed8743043d67614 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.8E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VV1_0212 b03d4a597312b87d6ed8743043d67614 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 1.4E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.3E-46 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 8.4E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Gene3D G3DSA:3.30.310.50 371 446 3.1E-24 T 14-10-2018 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 7.1E-203 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Gene3D G3DSA:3.40.120.10 176 363 2.2E-62 T 14-10-2018 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.789 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Gene3D G3DSA:3.40.120.10 4 155 7.8E-49 T 14-10-2018 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 2.2E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 SUPERFAMILY SSF53738 4 182 1.14E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 SUPERFAMILY SSF53738 157 257 1.02E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Gene3D G3DSA:3.40.120.10 258 340 2.2E-62 T 14-10-2018 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 SUPERFAMILY SSF53738 259 366 4.32E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 SUPERFAMILY SSF55957 359 445 1.57E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_1692 0fd9157b373eb77d3d5ca6478ed957d2 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 367 3.0E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV1_2567 ce1e83e0b69eb3e1bf781570d8a641ca 675 SUPERFAMILY SSF58104 372 673 5.23E-57 T 14-10-2018 VV1_2567 ce1e83e0b69eb3e1bf781570d8a641ca 675 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 491 638 3.6E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2567 ce1e83e0b69eb3e1bf781570d8a641ca 675 SMART SM00283 412 673 1.6E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2567 ce1e83e0b69eb3e1bf781570d8a641ca 675 Gene3D G3DSA:1.10.287.950 347 675 1.2E-56 T 14-10-2018 VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 Gene3D G3DSA:3.30.300.160 62 140 2.3E-10 T 14-10-2018 VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 SUPERFAMILY SSF52540 170 559 4.3E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 Gene3D G3DSA:3.30.450.90 151 289 9.1E-48 T 14-10-2018 VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 Gene3D G3DSA:3.40.50.300 291 561 4.6E-106 T 14-10-2018 VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 141 2.6E-19 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 Pfam PF00437 Type II/IV secretion system protein 189 456 4.7E-88 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 384 398 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 SUPERFAMILY SSF160246 1 140 1.02E-32 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VV1_1625 305b70b1a36dcd07f407eb326b17a420 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 560 2.9E-255 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VV2_1624 fb4f1087a90face4105292b558afd59f 623 Gene3D G3DSA:3.30.450.20 62 173 5.7E-70 T 14-10-2018 VV2_1624 fb4f1087a90face4105292b558afd59f 623 SUPERFAMILY SSF103190 56 184 1.7E-17 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_1624 fb4f1087a90face4105292b558afd59f 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 589 1.8E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1624 fb4f1087a90face4105292b558afd59f 623 Pfam PF00672 HAMP domain 292 342 1.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1624 fb4f1087a90face4105292b558afd59f 623 Gene3D G3DSA:3.30.450.20 49 266 5.7E-70 T 14-10-2018 VV2_1624 fb4f1087a90face4105292b558afd59f 623 SMART SM00304 292 346 9.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1624 fb4f1087a90face4105292b558afd59f 623 Gene3D G3DSA:1.10.287.950 292 623 1.7E-70 T 14-10-2018 VV2_1624 fb4f1087a90face4105292b558afd59f 623 SMART SM00283 361 622 9.4E-78 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1624 fb4f1087a90face4105292b558afd59f 623 Pfam PF02743 Cache domain 32 254 8.7E-29 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_1624 fb4f1087a90face4105292b558afd59f 623 SUPERFAMILY SSF58104 314 621 4.97E-76 T 14-10-2018 VV1_1809 cb2ca8ac1fb5840a34292eb910a037cc 199 SUPERFAMILY SSF52317 3 192 2.95E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_1809 cb2ca8ac1fb5840a34292eb910a037cc 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 184 2.8E-62 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 VV1_1809 cb2ca8ac1fb5840a34292eb910a037cc 199 Gene3D G3DSA:3.40.50.880 1 194 3.0E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_1809 cb2ca8ac1fb5840a34292eb910a037cc 199 Pfam PF01965 DJ-1/PfpI family 3 169 1.9E-37 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.814 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13181 Tetratricopeptide repeat 216 246 0.04 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13181 Tetratricopeptide repeat 180 213 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 SUPERFAMILY SSF48452 31 96 2.77E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 SUPERFAMILY SSF48452 109 279 1.18E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 180 213 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 69 102 81.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 214 247 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 SMART SM00028 35 68 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.02 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2978 38d4d23c66e38e274972d4bf75633a8f 389 Gene3D G3DSA:1.25.40.10 22 356 1.2E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0280 142648b2b52a70f917dde6e2ab2c4eee 264 Pfam PF05036 Sporulation related domain 187 258 8.3E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VV1_0280 142648b2b52a70f917dde6e2ab2c4eee 264 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 250 3.9E-46 T 14-10-2018 IPR012997 Rare lipoprotein A VV1_0280 142648b2b52a70f917dde6e2ab2c4eee 264 SUPERFAMILY SSF50685 83 171 1.12E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily VV1_0280 142648b2b52a70f917dde6e2ab2c4eee 264 Gene3D G3DSA:2.40.40.10 80 174 6.0E-39 T 14-10-2018 IPR036908 RlpA-like domain superfamily VV1_0280 142648b2b52a70f917dde6e2ab2c4eee 264 SUPERFAMILY SSF110997 186 258 1.09E-11 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV1_0280 142648b2b52a70f917dde6e2ab2c4eee 264 Pfam PF03330 Lytic transglycolase 81 170 5.3E-28 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VV1_0280 142648b2b52a70f917dde6e2ab2c4eee 264 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 21 173 25.138 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 SMART SM00382 509 695 1.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 ProSitePatterns PS00211 ABC transporters family signature. 621 635 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 SUPERFAMILY SSF52540 474 719 5.76E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 Pfam PF00664 ABC transporter transmembrane region 172 438 5.6E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 Gene3D G3DSA:1.20.1560.10 155 469 1.4E-71 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 Gene3D G3DSA:3.40.50.300 475 721 3.1E-88 T 14-10-2018 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 SUPERFAMILY SSF90123 156 467 1.31E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 Gene3D G3DSA:3.90.70.10 27 146 2.0E-9 T 14-10-2018 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 Pfam PF03412 Peptidase C39 family 25 120 2.1E-6 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 28 721 0.0 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VV2_0484 becf64e671b50a8838df4c3d8ceceb32 722 Pfam PF00005 ABC transporter 500 649 8.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2358 c85fbb6da1a37008669fd8f127db3195 170 Gene3D G3DSA:3.40.50.1000 13 170 1.6E-29 T 14-10-2018 IPR023214 HAD superfamily VV1_2358 c85fbb6da1a37008669fd8f127db3195 170 Pfam PF13419 Haloacid dehalogenase-like hydrolase 37 144 5.8E-10 T 14-10-2018 VV1_2358 c85fbb6da1a37008669fd8f127db3195 170 SUPERFAMILY SSF56784 13 153 4.0E-23 T 14-10-2018 IPR036412 HAD-like superfamily VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 Pfam PF13416 Bacterial extracellular solute-binding protein 47 327 2.0E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 Gene3D G3DSA:3.40.190.10 24 338 1.1E-135 T 14-10-2018 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 Gene3D G3DSA:3.40.190.10 341 353 1.8E-11 T 14-10-2018 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 147 166 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 167 186 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 66 84 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 295 316 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 353 372 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 229 248 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 126 145 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 PRINTS PR00181 Maltose binding protein signature 32 50 2.6E-66 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 Gene3D G3DSA:3.40.190.10 134 279 1.1E-135 T 14-10-2018 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 Gene3D G3DSA:3.40.190.10 354 392 1.8E-11 T 14-10-2018 VV2_1230 6b36006aaf4144c21917b711fcdd1d14 392 SUPERFAMILY SSF53850 23 391 1.38E-89 T 14-10-2018 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 Gene3D G3DSA:3.40.50.300 104 392 5.3E-130 T 14-10-2018 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 392 517 1.1E-43 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 385 2.4E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 12 522 1.8E-250 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 SUPERFAMILY SSF50615 20 104 3.73E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 Gene3D G3DSA:2.40.30.20 11 103 4.5E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 Gene3D G3DSA:1.20.150.20 393 523 1.7E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 38 102 5.7E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 11 522 49.539 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 SUPERFAMILY SSF47917 393 521 6.28E-45 T 14-10-2018 VV1_1019 685c6900a531aa79c09998a5dd02a059 523 SUPERFAMILY SSF52540 106 391 1.22E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1019 685c6900a531aa79c09998a5dd02a059 523 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 376 385 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_0003 518eadb43a91c6068e459e28dd3f2894 554 Gene3D G3DSA:2.30.40.10 60 117 5.1E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_0003 518eadb43a91c6068e459e28dd3f2894 554 SUPERFAMILY SSF51556 114 477 5.99E-36 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_0003 518eadb43a91c6068e459e28dd3f2894 554 Pfam PF07969 Amidohydrolase family 102 533 2.3E-24 T 14-10-2018 IPR013108 Amidohydrolase 3 VV1_0003 518eadb43a91c6068e459e28dd3f2894 554 SUPERFAMILY SSF51338 54 539 4.32E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_0834 0b08b2ae71f0fbd87da34b433d5747fe 346 SUPERFAMILY SSF103481 69 170 7.98E-13 T 14-10-2018 VV1_0834 0b08b2ae71f0fbd87da34b433d5747fe 346 Pfam PF00892 EamA-like transporter family 183 315 1.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0834 0b08b2ae71f0fbd87da34b433d5747fe 346 Pfam PF00892 EamA-like transporter family 36 168 3.2E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 Gene3D G3DSA:3.60.150.10 1 361 5.7E-162 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 Pfam PF01264 Chorismate synthase 10 345 2.0E-145 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 9.7E-145 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 PIRSF PIRSF001456 3 360 4.3E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 SUPERFAMILY SSF103263 4 354 3.79E-151 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV1_1981 c3c22e1639c42dbd4d239157319ef4b5 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.984 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VV2_0172 9a4eb87d5f6f7ad704459adb22189410 372 Gene3D G3DSA:1.10.3290.10 37 291 5.6E-45 T 14-10-2018 IPR036597 Fido-like domain superfamily VV2_0172 9a4eb87d5f6f7ad704459adb22189410 372 SUPERFAMILY SSF140931 94 293 2.35E-38 T 14-10-2018 IPR036597 Fido-like domain superfamily VV2_0172 9a4eb87d5f6f7ad704459adb22189410 372 Pfam PF02661 Fic/DOC family 111 223 1.5E-15 T 14-10-2018 IPR003812 Fido domain VV2_0172 9a4eb87d5f6f7ad704459adb22189410 372 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 9.8E-28 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 SUPERFAMILY SSF52540 155 292 1.2E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 Gene3D G3DSA:3.40.50.11040 3 178 3.6E-20 T 14-10-2018 VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 Pfam PF05127 Helicase 181 348 4.6E-57 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 SUPERFAMILY SSF55729 374 547 3.17E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 675 43.505 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 Pfam PF08351 Domain of unknown function (DUF1726) 69 117 5.4E-6 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 Pfam PF13718 GNAT acetyltransferase 2 383 497 6.5E-19 T 14-10-2018 IPR000182 GNAT domain VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 Gene3D G3DSA:3.40.50.12320 179 338 4.5E-47 T 14-10-2018 VV2_1171 1002c13bcd1ce8b365b7ec64ab09199e 675 Gene3D G3DSA:3.40.630.30 341 545 1.4E-69 T 14-10-2018 VV1_1164 5069ae18f6585b526e4e3924981f1b9f 284 Gene3D G3DSA:1.10.357.140 19 179 9.9E-43 T 14-10-2018 VV1_1164 5069ae18f6585b526e4e3924981f1b9f 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 2.2E-107 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VV1_1164 5069ae18f6585b526e4e3924981f1b9f 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.663 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VV1_1164 5069ae18f6585b526e4e3924981f1b9f 284 Pfam PF01040 UbiA prenyltransferase family 24 266 3.3E-69 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VV1_1428 8a3ebef9b6656fef1124b5f9081a897d 290 SUPERFAMILY SSF53448 2 271 1.38E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_1428 8a3ebef9b6656fef1124b5f9081a897d 290 Pfam PF00483 Nucleotidyl transferase 9 265 3.2E-32 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VV1_1428 8a3ebef9b6656fef1124b5f9081a897d 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 7.0E-124 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VV1_1428 8a3ebef9b6656fef1124b5f9081a897d 290 Gene3D G3DSA:3.90.550.10 1 278 1.3E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV2_0163 c566a7f639f91b0e16b1405558756c1a 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 408 4.2E-148 T 14-10-2018 VV2_0163 c566a7f639f91b0e16b1405558756c1a 440 SUPERFAMILY SSF102114 24 372 1.96E-37 T 14-10-2018 VV2_0163 c566a7f639f91b0e16b1405558756c1a 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 3.0E-6 T 14-10-2018 VV2_0163 c566a7f639f91b0e16b1405558756c1a 440 Pfam PF04055 Radical SAM superfamily 24 196 3.4E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV2_0163 c566a7f639f91b0e16b1405558756c1a 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 5.2E-18 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VV2_0163 c566a7f639f91b0e16b1405558756c1a 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 1.9E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VV2_0163 c566a7f639f91b0e16b1405558756c1a 440 Gene3D G3DSA:3.20.20.70 15 411 2.2E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 3.2E-136 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SMART SM00864 13 205 1.6E-112 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Gene3D G3DSA:3.40.50.1440 5 220 1.5E-79 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Gene3D G3DSA:3.30.1330.20 221 327 1.3E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.4E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SUPERFAMILY SSF52490 13 208 8.11E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 5.2E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 391 38.123 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SUPERFAMILY SSF55307 204 320 9.61E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VV1_0572 468bb7b53fc1ad2b5ed7ccfd41ae6d2e 404 SMART SM00865 207 325 1.4E-55 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VV2_1314 3b4e6b05d6a8b78ccf5348cfd5a23810 466 Pfam PF13250 Domain of unknown function (DUF4041) 166 218 7.1E-17 T 14-10-2018 IPR025280 Domain of unknown function DUF4041 VV2_1314 3b4e6b05d6a8b78ccf5348cfd5a23810 466 SMART SM00974 333 416 6.5E-28 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VV2_1314 3b4e6b05d6a8b78ccf5348cfd5a23810 466 Pfam PF10544 T5orf172 domain 323 414 1.4E-12 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VV2_1477 b90939447bc812c1ec7620ce53d0e5df 127 SUPERFAMILY SSF54593 1 126 1.51E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_1477 b90939447bc812c1ec7620ce53d0e5df 127 Gene3D G3DSA:3.10.180.10 7 126 5.1E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_1477 b90939447bc812c1ec7620ce53d0e5df 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.2E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 Gene3D G3DSA:1.10.10.10 147 259 6.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 Pfam PF00486 Transcriptional regulatory protein, C terminal 177 252 9.4E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 SMART SM00862 176 252 7.3E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 Pfam PF00072 Response regulator receiver domain 31 139 7.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 SUPERFAMILY SSF46894 153 253 1.98E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 SUPERFAMILY SSF52172 21 151 1.21E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 SMART SM00448 29 139 4.4E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2009 6e3c4335a9812c1c0b74767fb8d90971 261 Gene3D G3DSA:3.40.50.2300 22 146 5.2E-32 T 14-10-2018 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 SUPERFAMILY SSF52540 118 378 4.5E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 SMART SM00490 519 603 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Gene3D G3DSA:2.30.30.140 1 53 1.6E-23 T 14-10-2018 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Gene3D G3DSA:2.30.30.930 55 114 4.2E-28 T 14-10-2018 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Gene3D G3DSA:3.40.50.10810 150 430 1.7E-102 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Gene3D G3DSA:3.30.360.80 714 786 2.1E-30 T 14-10-2018 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.8E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.259 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Gene3D G3DSA:3.40.50.300 431 635 2.4E-47 T 14-10-2018 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Pfam PF00176 SNF2 family N-terminal domain 174 342 1.5E-14 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.7E-150 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 SMART SM00487 150 346 1.6E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_1459 5127c9d96cf2cb31dd2161c11c24d969 969 SUPERFAMILY SSF52540 198 657 3.17E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 SUPERFAMILY SSF51395 1 336 1.23E-105 T 14-10-2018 VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.562 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 PIRSF PIRSF000164 10 336 4.3E-107 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.3E-88 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.7E-145 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 Gene3D G3DSA:3.20.20.70 2 336 2.6E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VV1_2637 714a6a06178d9f2b17172d9d10ddf668 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VV1_1979 aacb97f39c0529ef1f3392b7775cf7e9 176 Gene3D G3DSA:3.30.1370.110 49 175 2.6E-28 T 14-10-2018 VV1_1979 aacb97f39c0529ef1f3392b7775cf7e9 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 40.19 T 14-10-2018 IPR022990 Uncharacterised protein family UPF0115 VV1_1979 aacb97f39c0529ef1f3392b7775cf7e9 176 SMART SM00463 94 172 2.1E-16 T 14-10-2018 IPR002625 Smr domain VV1_1979 aacb97f39c0529ef1f3392b7775cf7e9 176 Pfam PF01713 Smr domain 97 171 2.1E-18 T 14-10-2018 IPR002625 Smr domain VV1_1979 aacb97f39c0529ef1f3392b7775cf7e9 176 SUPERFAMILY SSF160443 95 171 3.4E-12 T 14-10-2018 IPR036063 Smr domain superfamily VV2_1335 09a67934b7d69518b0134e25b50902be 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 1.0E-16 T 14-10-2018 IPR022569 Ferredoxin, C-terminal VV2_1335 09a67934b7d69518b0134e25b50902be 107 SUPERFAMILY SSF54862 3 96 7.38E-23 T 14-10-2018 VV2_1335 09a67934b7d69518b0134e25b50902be 107 Gene3D G3DSA:3.30.70.20 2 103 1.1E-25 T 14-10-2018 VV2_1335 09a67934b7d69518b0134e25b50902be 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_1335 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VV2_1335 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VV2_1335 09a67934b7d69518b0134e25b50902be 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF55031 181 291 5.08E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 SUPERFAMILY SSF53187 6 376 2.24E-66 T 14-10-2018 VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.111 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 Gene3D G3DSA:3.40.630.10 9 364 4.6E-127 T 14-10-2018 VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 7.6E-180 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 7.0E-46 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 Pfam PF07687 Peptidase dimerisation domain 177 284 1.1E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 Gene3D G3DSA:3.30.70.360 181 294 4.6E-127 T 14-10-2018 VV1_1916 5209ff9658cf86d355d7336e0a37ba23 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV1_2354 950c8a28994aff3392b133d8a3559426 537 SUPERFAMILY SSF58104 227 536 1.7E-68 T 14-10-2018 VV1_2354 950c8a28994aff3392b133d8a3559426 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 4.0E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_2354 950c8a28994aff3392b133d8a3559426 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 4.0E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_2354 950c8a28994aff3392b133d8a3559426 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 4.0E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_2354 950c8a28994aff3392b133d8a3559426 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 501 1.0E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2354 950c8a28994aff3392b133d8a3559426 537 Gene3D G3DSA:1.10.287.950 206 537 4.4E-66 T 14-10-2018 VV1_2354 950c8a28994aff3392b133d8a3559426 537 SMART SM00283 274 535 4.0E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2354 950c8a28994aff3392b133d8a3559426 537 SMART SM00304 205 259 9.5E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2131 0b63aae601a539a78b4f980025f0223c 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV1_2131 0b63aae601a539a78b4f980025f0223c 405 Gene3D G3DSA:3.90.550.10 2 286 3.5E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2131 0b63aae601a539a78b4f980025f0223c 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.357 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV1_2131 0b63aae601a539a78b4f980025f0223c 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV1_2131 0b63aae601a539a78b4f980025f0223c 405 SUPERFAMILY SSF51161 293 403 5.89E-14 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_2131 0b63aae601a539a78b4f980025f0223c 405 Gene3D G3DSA:2.160.10.10 287 403 3.1E-32 T 14-10-2018 VV1_2131 0b63aae601a539a78b4f980025f0223c 405 Pfam PF00483 Nucleotidyl transferase 6 273 8.3E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VV1_2131 0b63aae601a539a78b4f980025f0223c 405 SUPERFAMILY SSF53448 4 358 4.22E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2131 0b63aae601a539a78b4f980025f0223c 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 1.4E-152 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV1_2131 0b63aae601a539a78b4f980025f0223c 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV1_1489 87f9b2cc81ffac57399b7ea1ee12bdee 418 Pfam PF11871 Domain of unknown function (DUF3391) 4 138 5.5E-30 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 VV1_1489 87f9b2cc81ffac57399b7ea1ee12bdee 418 SUPERFAMILY SSF109604 160 331 2.47E-26 T 14-10-2018 VV1_1489 87f9b2cc81ffac57399b7ea1ee12bdee 418 SMART SM00471 165 301 1.9E-7 T 14-10-2018 IPR003607 HD/PDEase domain VV1_1489 87f9b2cc81ffac57399b7ea1ee12bdee 418 Pfam PF01966 HD domain 171 291 2.7E-15 T 14-10-2018 IPR006674 HD domain VV1_1489 87f9b2cc81ffac57399b7ea1ee12bdee 418 Gene3D G3DSA:1.10.3210.10 14 330 2.7E-56 T 14-10-2018 VV1_1489 87f9b2cc81ffac57399b7ea1ee12bdee 418 TIGRFAM TIGR00277 HDIG: HDIG domain 167 260 2.6E-7 T 14-10-2018 IPR006675 HDIG domain VV1_1814 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88946 9 117 2.94E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1814 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04542 Sigma-70 region 2 36 102 4.7E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1814 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.10.10 130 197 9.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1814 18bbf3ef431660a0224b7b9a4273bde6 197 Gene3D G3DSA:1.10.1740.10 16 99 6.5E-25 T 14-10-2018 VV1_1814 18bbf3ef431660a0224b7b9a4273bde6 197 SUPERFAMILY SSF88659 130 192 5.05E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1814 18bbf3ef431660a0224b7b9a4273bde6 197 Pfam PF04545 Sigma-70, region 4 142 190 2.9E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VV1_1814 18bbf3ef431660a0224b7b9a4273bde6 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 190 1.0E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_2820 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04994 TfoX C-terminal domain 114 193 2.5E-28 T 14-10-2018 IPR007077 TfoX, C-terminal VV1_2820 9af49552851ba75be8d779f8953c33fa 195 SUPERFAMILY SSF159894 3 102 4.97E-29 T 14-10-2018 VV1_2820 9af49552851ba75be8d779f8953c33fa 195 PIRSF PIRSF028788 4 194 7.8E-40 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VV1_2820 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:1.10.150.20 113 194 6.3E-18 T 14-10-2018 VV1_2820 9af49552851ba75be8d779f8953c33fa 195 Pfam PF04993 TfoX N-terminal domain 11 101 4.2E-26 T 14-10-2018 IPR007076 TfoX, N-terminal VV1_2820 9af49552851ba75be8d779f8953c33fa 195 Gene3D G3DSA:3.30.1460.30 3 102 7.6E-21 T 14-10-2018 VV1_0248 896699582d671f97604705947ff71b86 553 SUPERFAMILY SSF56300 31 364 9.59E-97 T 14-10-2018 VV1_0248 896699582d671f97604705947ff71b86 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 5.1E-34 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 Gene3D G3DSA:3.60.21.10 30 365 2.1E-125 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV1_0248 896699582d671f97604705947ff71b86 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 SUPERFAMILY SSF55816 366 543 2.49E-51 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 487 506 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 36 54 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 211 228 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 242 265 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 287 307 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 PRINTS PR01607 Apyrase family signature 420 443 1.3E-51 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0248 896699582d671f97604705947ff71b86 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.4E-22 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV1_0248 896699582d671f97604705947ff71b86 553 Gene3D G3DSA:3.90.780.10 366 552 2.4E-58 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_0216 195b1f2b1aba9c39fd7c76d41bd84627 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 5.3E-92 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VV1_0216 195b1f2b1aba9c39fd7c76d41bd84627 397 Gene3D G3DSA:1.20.1330.10 42 241 5.5E-31 T 14-10-2018 VV1_0216 195b1f2b1aba9c39fd7c76d41bd84627 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 142 1.9E-11 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_0216 195b1f2b1aba9c39fd7c76d41bd84627 397 SUPERFAMILY SSF64518 1 397 2.62E-63 T 14-10-2018 VV1_0216 195b1f2b1aba9c39fd7c76d41bd84627 397 Gene3D G3DSA:1.20.1330.10 270 372 2.9E-9 T 14-10-2018 VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SUPERFAMILY SSF81901 102 318 1.88E-46 T 14-10-2018 VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SUPERFAMILY SSF81901 46 124 2.04E-6 T 14-10-2018 VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Gene3D G3DSA:1.25.40.10 46 252 3.5E-46 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SMART SM00671 128 163 3.6E-8 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SMART SM00671 279 314 2.6E-6 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SMART SM00671 200 235 1.2E-5 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SMART SM00671 96 127 13.0 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SMART SM00671 237 278 5.3 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SMART SM00671 164 199 4.6E-7 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 SMART SM00671 60 95 300.0 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Gene3D G3DSA:1.25.40.10 253 345 1.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Pfam PF08238 Sel1 repeat 112 127 160.0 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Pfam PF08238 Sel1 repeat 280 314 1.2E-6 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Pfam PF08238 Sel1 repeat 129 163 6.8E-6 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Pfam PF08238 Sel1 repeat 165 199 4.6E-7 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Pfam PF08238 Sel1 repeat 257 275 0.65 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1036 b5593e19ae4ceacfcaf386cad16b664a 347 Pfam PF08238 Sel1 repeat 201 235 0.0024 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2509 fdfac2e5e49d5a52f80d8bd675990c19 219 PIRSF PIRSF006324 11 219 1.2E-55 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_2509 fdfac2e5e49d5a52f80d8bd675990c19 219 Pfam PF01810 LysE type translocator 26 217 1.2E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 SMART SM00267 454 619 4.5E-46 T 14-10-2018 IPR000160 GGDEF domain VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 SUPERFAMILY SSF55073 470 618 8.63E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 Gene3D G3DSA:3.30.70.270 469 624 1.6E-42 T 14-10-2018 VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 SUPERFAMILY SSF103190 36 206 4.79E-42 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 SUPERFAMILY SSF55785 352 462 4.89E-16 T 14-10-2018 IPR035965 PAS domain superfamily VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 Pfam PF13426 PAS domain 352 452 1.4E-9 T 14-10-2018 IPR000014 PAS domain VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 1.4E-39 T 14-10-2018 IPR000160 GGDEF domain VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 Gene3D G3DSA:3.30.450.20 339 468 7.0E-20 T 14-10-2018 VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 Gene3D G3DSA:3.30.450.20 207 302 1.6E-35 T 14-10-2018 VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 Gene3D G3DSA:1.20.5.170 26 72 7.2E-22 T 14-10-2018 VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 SMART SM00091 340 407 7.4E-4 T 14-10-2018 IPR000014 PAS domain VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 8.9E-12 T 14-10-2018 IPR000014 PAS domain VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 615 1.9E-36 T 14-10-2018 IPR000160 GGDEF domain VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 SUPERFAMILY SSF103190 207 298 3.06E-22 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_0646 ef61bd769f194726c093a1aed3f91d27 626 Gene3D G3DSA:3.30.450.20 73 206 9.0E-30 T 14-10-2018 VV1_1160 8c1c7eca1d017aa3da3611961167a6bc 106 SMART SM00450 7 102 2.2E-17 T 14-10-2018 IPR001763 Rhodanese-like domain VV1_1160 8c1c7eca1d017aa3da3611961167a6bc 106 Gene3D G3DSA:3.40.250.10 1 101 4.5E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV1_1160 8c1c7eca1d017aa3da3611961167a6bc 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.601 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VV1_1160 8c1c7eca1d017aa3da3611961167a6bc 106 SUPERFAMILY SSF52821 1 105 1.96E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV1_1160 8c1c7eca1d017aa3da3611961167a6bc 106 Pfam PF00581 Rhodanese-like domain 13 98 4.4E-11 T 14-10-2018 IPR001763 Rhodanese-like domain VV1_3190 d64e0474c2014c3390160b250bd0d963 105 SMART SM00530 9 68 1.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_3190 d64e0474c2014c3390160b250bd0d963 105 Gene3D G3DSA:1.10.260.40 6 104 2.6E-25 T 14-10-2018 VV1_3190 d64e0474c2014c3390160b250bd0d963 105 Pfam PF12844 Helix-turn-helix domain 9 69 1.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_3190 d64e0474c2014c3390160b250bd0d963 105 SUPERFAMILY SSF47413 6 73 6.76E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1542 540e3bf67f7c2a453956eb7526ec0a7a 267 Gene3D G3DSA:1.10.1660.10 7 80 2.2E-25 T 14-10-2018 VV2_1542 540e3bf67f7c2a453956eb7526ec0a7a 267 Pfam PF13411 MerR HTH family regulatory protein 12 79 8.4E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_1542 540e3bf67f7c2a453956eb7526ec0a7a 267 SMART SM00422 12 81 2.5E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_1542 540e3bf67f7c2a453956eb7526ec0a7a 267 SUPERFAMILY SSF46955 12 105 8.24E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV2_1237 8f997534292d5057e075d29bc73c56b2 290 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 53.229 T 14-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 VV2_1237 8f997534292d5057e075d29bc73c56b2 290 SUPERFAMILY SSF53613 2 275 1.71E-69 T 14-10-2018 IPR029056 Ribokinase-like VV2_1237 8f997534292d5057e075d29bc73c56b2 290 Gene3D G3DSA:3.40.1190.20 1 289 5.8E-87 T 14-10-2018 IPR029056 Ribokinase-like VV2_1237 8f997534292d5057e075d29bc73c56b2 290 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 1.0E-103 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VV2_1237 8f997534292d5057e075d29bc73c56b2 290 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 4.4E-21 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VV2_0010 7646dc621fae9f681a1963587380955a 547 Pfam PF01266 FAD dependent oxidoreductase 11 359 2.5E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV2_0010 7646dc621fae9f681a1963587380955a 547 Gene3D G3DSA:3.30.9.10 86 318 4.4E-79 T 14-10-2018 VV2_0010 7646dc621fae9f681a1963587380955a 547 Gene3D G3DSA:3.50.50.60 11 366 4.4E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0010 7646dc621fae9f681a1963587380955a 547 Gene3D G3DSA:1.10.10.1100 418 489 2.7E-20 T 14-10-2018 VV2_0010 7646dc621fae9f681a1963587380955a 547 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 537 2.3E-267 T 14-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV2_0010 7646dc621fae9f681a1963587380955a 547 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 482 1.7E-10 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VV2_0010 7646dc621fae9f681a1963587380955a 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV2_0010 7646dc621fae9f681a1963587380955a 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV2_0010 7646dc621fae9f681a1963587380955a 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV2_0010 7646dc621fae9f681a1963587380955a 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV2_0010 7646dc621fae9f681a1963587380955a 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV2_0010 7646dc621fae9f681a1963587380955a 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 2.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VV2_0010 7646dc621fae9f681a1963587380955a 547 SUPERFAMILY SSF51905 9 319 1.79E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 SUPERFAMILY SSF53706 60 646 3.14E-201 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 PIRSF PIRSF036643 12 439 4.0E-101 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 PIRSF PIRSF036643 641 677 420.0 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 PIRSF PIRSF036643 785 951 8.8E-17 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 PIRSF PIRSF036643 448 593 3.9E-11 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 Gene3D G3DSA:2.40.40.20 767 951 8.0E-49 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 SMART SM00926 61 115 7.1E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 SUPERFAMILY SSF50692 752 951 1.62E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 6.6E-55 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 Gene3D G3DSA:3.40.228.10 195 394 6.8E-133 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.4E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 Gene3D G3DSA:3.40.50.740 126 617 6.8E-133 T 14-10-2018 VV1_2590 7dcf084dffd555ddf1b287db77d0a92e 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 8.7E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VV1_2193 594ca4c1c1f63fa664d77012defa47ef 195 Gene3D G3DSA:3.40.630.30 36 172 2.5E-18 T 14-10-2018 VV1_2193 594ca4c1c1f63fa664d77012defa47ef 195 Pfam PF13302 Acetyltransferase (GNAT) domain 80 171 1.6E-10 T 14-10-2018 IPR000182 GNAT domain VV1_2193 594ca4c1c1f63fa664d77012defa47ef 195 SUPERFAMILY SSF55729 39 185 2.66E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1985 779e590db5ed841d7d429231e7712c1d 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 4.9E-45 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VV1_1985 779e590db5ed841d7d429231e7712c1d 672 SUPERFAMILY SSF51905 266 663 1.29E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1985 779e590db5ed841d7d429231e7712c1d 672 Gene3D G3DSA:3.30.9.10 349 573 4.0E-133 T 14-10-2018 VV1_1985 779e590db5ed841d7d429231e7712c1d 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 1.1E-153 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VV1_1985 779e590db5ed841d7d429231e7712c1d 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.716 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VV1_1985 779e590db5ed841d7d429231e7712c1d 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 1.5E-43 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV1_1985 779e590db5ed841d7d429231e7712c1d 672 Gene3D G3DSA:3.50.50.60 265 663 4.0E-133 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1985 779e590db5ed841d7d429231e7712c1d 672 Gene3D G3DSA:3.40.50.150 7 253 4.4E-104 T 14-10-2018 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 Pfam PF03466 LysR substrate binding domain 90 294 2.1E-23 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 Gene3D G3DSA:1.10.10.10 7 93 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 Gene3D G3DSA:3.40.190.10 164 263 1.3E-37 T 14-10-2018 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 SUPERFAMILY SSF53850 91 293 3.8E-25 T 14-10-2018 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 Gene3D G3DSA:3.40.190.10 103 290 1.3E-37 T 14-10-2018 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1377 7e64196d9fc7e47b011b022d58e57e5a 297 SUPERFAMILY SSF46785 7 80 2.73E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 SUPERFAMILY SSF48168 10 221 7.19E-75 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 SUPERFAMILY SSF51998 222 739 1.8E-164 T 14-10-2018 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 Gene3D G3DSA:3.20.70.20 78 742 3.0E-155 T 14-10-2018 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.9E-11 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.2E-39 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 Pfam PF03477 ATP cone domain 6 92 1.8E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.5E-173 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3041 8cef44323c93d8db47c0ed0b1354a16c 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 5.4E-114 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3049 9488790c0912f66bedda213bedf39842 414 Gene3D G3DSA:3.30.360.10 159 355 3.1E-143 T 14-10-2018 VV1_3049 9488790c0912f66bedda213bedf39842 414 SUPERFAMILY SSF51735 3 178 1.36E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_3049 9488790c0912f66bedda213bedf39842 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 9.9E-30 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VV1_3049 9488790c0912f66bedda213bedf39842 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.0E-34 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VV1_3049 9488790c0912f66bedda213bedf39842 414 Gene3D G3DSA:3.40.50.720 4 398 3.1E-143 T 14-10-2018 VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 Gene3D G3DSA:3.40.50.300 1 165 2.9E-29 T 14-10-2018 VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 SMART SM00490 261 344 2.2E-11 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 Gene3D G3DSA:3.40.50.300 210 367 4.9E-32 T 14-10-2018 VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 SUPERFAMILY SSF57829 424 465 2.2E-6 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.6E-23 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 SUPERFAMILY SSF52540 48 360 9.9E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 Pfam PF00271 Helicase conserved C-terminal domain 238 342 1.9E-13 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2845 f46afe167d8815c654315bc37a89c9dd 580 SMART SM00487 1 177 2.1E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_1086 83a3a1d31c836b82dfc757a173e0c2a5 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 425 2.6E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV1_1086 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.90.76.10 57 165 2.9E-124 T 14-10-2018 VV1_1086 83a3a1d31c836b82dfc757a173e0c2a5 518 SUPERFAMILY SSF53850 26 516 5.43E-129 T 14-10-2018 VV1_1086 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.40.190.10 32 278 2.9E-124 T 14-10-2018 VV1_1086 83a3a1d31c836b82dfc757a173e0c2a5 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VV1_1086 83a3a1d31c836b82dfc757a173e0c2a5 518 Gene3D G3DSA:3.10.105.10 279 494 2.9E-124 T 14-10-2018 VV1_1086 83a3a1d31c836b82dfc757a173e0c2a5 518 PIRSF PIRSF002741 20 502 1.1E-94 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV2_0397 636bee614abc2360feeca7b27832ff0a 297 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 47 61 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV2_0397 636bee614abc2360feeca7b27832ff0a 297 SUPERFAMILY SSF53790 41 280 3.93E-69 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VV2_0397 636bee614abc2360feeca7b27832ff0a 297 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 42 276 1.8E-87 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV2_0397 636bee614abc2360feeca7b27832ff0a 297 Gene3D G3DSA:3.30.950.10 158 286 5.6E-36 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VV2_0397 636bee614abc2360feeca7b27832ff0a 297 Gene3D G3DSA:3.40.1010.10 40 157 1.7E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VV2_0397 636bee614abc2360feeca7b27832ff0a 297 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 44 252 4.7E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 Gene3D G3DSA:3.30.565.10 318 447 4.1E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 SMART SM00388 222 286 1.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 8.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 8.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 8.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 SUPERFAMILY SSF47384 207 284 2.75E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 SUPERFAMILY SSF55874 330 441 4.32E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 439 1.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 SMART SM00387 331 441 1.5E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 Gene3D G3DSA:1.10.287.130 173 286 4.0E-17 T 14-10-2018 VV2_0778 43775501a5a8a5e84406f816d9416c8e 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 285 2.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0447 25458cfc034b99910596661851d699f9 400 SUPERFAMILY SSF50494 36 319 2.54E-41 T 14-10-2018 IPR009003 Peptidase S1, PA clan VV1_0447 25458cfc034b99910596661851d699f9 400 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV1_0447 25458cfc034b99910596661851d699f9 400 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VV1_0447 25458cfc034b99910596661851d699f9 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 7.0E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_0447 25458cfc034b99910596661851d699f9 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 7.0E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_0447 25458cfc034b99910596661851d699f9 400 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 7.0E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_0447 25458cfc034b99910596661851d699f9 400 Gene3D G3DSA:2.40.10.10 164 318 9.5E-24 T 14-10-2018 VV1_0447 25458cfc034b99910596661851d699f9 400 Gene3D G3DSA:2.40.10.10 36 158 2.2E-19 T 14-10-2018 VV1_0447 25458cfc034b99910596661851d699f9 400 Pfam PF00089 Trypsin 36 315 4.8E-29 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV1_0447 25458cfc034b99910596661851d699f9 400 SMART SM00020 24 315 2.3E-29 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV1_0447 25458cfc034b99910596661851d699f9 400 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 378 398 1.8E-5 T 14-10-2018 IPR020008 GlyGly-CTERM domain VV1_2797 009000df490406b34d71311fc5cd9ee2 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_2797 009000df490406b34d71311fc5cd9ee2 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.724 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_2797 009000df490406b34d71311fc5cd9ee2 367 SUPERFAMILY SSF56104 14 344 7.52E-69 T 14-10-2018 VV1_2797 009000df490406b34d71311fc5cd9ee2 367 Gene3D G3DSA:3.30.200.20 13 129 8.2E-24 T 14-10-2018 VV1_2797 009000df490406b34d71311fc5cd9ee2 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 8.0E-214 T 14-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 VV1_2797 009000df490406b34d71311fc5cd9ee2 367 Gene3D G3DSA:3.30.470.20 130 292 3.3E-15 T 14-10-2018 VV1_2797 009000df490406b34d71311fc5cd9ee2 367 Pfam PF01259 SAICAR synthetase 22 293 4.9E-47 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 Gene3D G3DSA:1.10.287.130 167 277 7.0E-24 T 14-10-2018 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 SMART SM00388 222 282 1.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 SMART SM00387 321 431 1.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 SUPERFAMILY SSF47384 215 277 8.83E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 7.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 7.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 SUPERFAMILY SSF55874 285 429 2.23E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 Gene3D G3DSA:3.30.565.10 284 432 2.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 SMART SM00304 169 221 1.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 429 5.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 Pfam PF00672 HAMP domain 169 217 1.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0857 0b679907a26aedf1240c33ffa605b29a 432 SUPERFAMILY SSF158472 171 218 2.62E-5 T 14-10-2018 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.2E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF81301 180 393 1.31E-59 T 14-10-2018 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 701 5.3E-268 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Gene3D G3DSA:3.10.20.30 382 456 3.0E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Gene3D G3DSA:3.30.70.260 627 706 3.1E-12 T 14-10-2018 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF02824 TGS domain 389 447 3.8E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF81271 376 448 1.64E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SMART SM00471 41 153 2.6E-10 T 14-10-2018 IPR003607 HD/PDEase domain VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF13291 ACT domain 627 703 2.3E-13 T 14-10-2018 IPR002912 ACT domain VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SMART SM00954 235 345 2.7E-59 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Pfam PF13328 HD domain 28 175 4.2E-53 T 14-10-2018 IPR003607 HD/PDEase domain VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF55021 633 703 2.83E-6 T 14-10-2018 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Gene3D G3DSA:1.10.3210.10 3 190 6.8E-79 T 14-10-2018 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 SUPERFAMILY SSF109604 3 190 4.71E-74 T 14-10-2018 VV1_0852 8f7fc84a3ae947dc0d05bc8b665c4ea1 706 Gene3D G3DSA:3.30.460.10 193 325 6.9E-47 T 14-10-2018 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SMART SM00889 485 603 8.5E-76 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.307 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF50447 271 409 5.08E-36 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54211 484 604 7.59E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.230.10 489 693 9.5E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 4.6E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF52540 6 288 1.97E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 8.0E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF14492 Elongation Factor G, domain II 409 483 2.4E-33 T 14-10-2018 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:2.40.30.10 299 405 3.3E-48 T 14-10-2018 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54980 608 695 6.71E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.70.240 609 680 9.5E-92 T 14-10-2018 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.6E-48 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SMART SM00838 605 693 1.5E-57 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.4E-67 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 SUPERFAMILY SSF54980 407 485 8.99E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.40.50.300 1 298 9.9E-117 T 14-10-2018 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Gene3D G3DSA:3.30.70.870 410 488 4.1E-32 T 14-10-2018 VV1_1338 5a62b31effbd9ea7c0bb8e1d2e377e0e 699 Pfam PF00679 Elongation factor G C-terminus 605 691 5.8E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like VV1_0454 58b08c5d7d889e65318f17f60e286408 250 Gene3D G3DSA:3.20.20.380 3 249 2.3E-86 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VV1_0454 58b08c5d7d889e65318f17f60e286408 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.2 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VV1_0454 58b08c5d7d889e65318f17f60e286408 250 Pfam PF03932 CutC family 4 205 1.4E-82 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VV1_0454 58b08c5d7d889e65318f17f60e286408 250 SUPERFAMILY SSF110395 4 247 2.35E-71 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VV2_0414 5b430ed33a3e3bf975a96ff87efdb5c9 454 SUPERFAMILY SSF56219 32 450 9.35E-14 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV2_0414 5b430ed33a3e3bf975a96ff87efdb5c9 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 38 445 1.1E-26 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV2_1556 c70b6a1a332dfe8759ac605af157bc01 273 Pfam PF12849 PBP superfamily domain 19 258 1.2E-40 T 14-10-2018 IPR024370 PBP domain VV2_1556 c70b6a1a332dfe8759ac605af157bc01 273 SUPERFAMILY SSF53850 16 273 9.92E-72 T 14-10-2018 VV2_1556 c70b6a1a332dfe8759ac605af157bc01 273 Gene3D G3DSA:3.40.190.10 99 233 2.1E-83 T 14-10-2018 VV2_1556 c70b6a1a332dfe8759ac605af157bc01 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 271 3.9E-77 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VV2_1556 c70b6a1a332dfe8759ac605af157bc01 273 Gene3D G3DSA:3.40.190.10 30 270 2.1E-83 T 14-10-2018 VV2_1484 ae0f791ec7720f202d6164c0d4138d13 397 Gene3D G3DSA:3.40.640.10 58 296 1.6E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1484 ae0f791ec7720f202d6164c0d4138d13 397 Gene3D G3DSA:3.90.1150.10 40 387 1.6E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_1484 ae0f791ec7720f202d6164c0d4138d13 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VV2_1484 ae0f791ec7720f202d6164c0d4138d13 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.398 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VV2_1484 ae0f791ec7720f202d6164c0d4138d13 397 SUPERFAMILY SSF53383 4 395 3.9E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1484 ae0f791ec7720f202d6164c0d4138d13 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 6.0E-209 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VV2_1484 ae0f791ec7720f202d6164c0d4138d13 397 Pfam PF00155 Aminotransferase class I and II 43 387 1.1E-76 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV1_2045 5545fa3c296ec432166ed68f65df11ca 602 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 60 473 5.6E-16 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_2045 5545fa3c296ec432166ed68f65df11ca 602 Gene3D G3DSA:3.40.50.300 267 492 4.9E-8 T 14-10-2018 VV1_2045 5545fa3c296ec432166ed68f65df11ca 602 Gene3D G3DSA:3.40.50.300 6 258 1.3E-8 T 14-10-2018 VV1_2045 5545fa3c296ec432166ed68f65df11ca 602 SUPERFAMILY SSF52540 58 475 3.59E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0803 3ce4137a0ff06f37b3bb8543fcef4c38 688 SMART SM00327 308 481 1.8E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_0803 3ce4137a0ff06f37b3bb8543fcef4c38 688 Pfam PF13768 von Willebrand factor type A domain 312 460 3.5E-17 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_0803 3ce4137a0ff06f37b3bb8543fcef4c38 688 Gene3D G3DSA:3.40.50.410 309 480 5.6E-30 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0803 3ce4137a0ff06f37b3bb8543fcef4c38 688 SMART SM00609 32 160 1.6E-6 T 14-10-2018 IPR013694 VIT domain VV2_0803 3ce4137a0ff06f37b3bb8543fcef4c38 688 Pfam PF08487 Vault protein inter-alpha-trypsin domain 48 158 2.8E-27 T 14-10-2018 IPR013694 VIT domain VV2_0803 3ce4137a0ff06f37b3bb8543fcef4c38 688 SUPERFAMILY SSF53300 307 476 1.22E-29 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0985 1b965d0923f786a95e64f93081c6808a 336 Gene3D G3DSA:3.40.190.10 32 326 1.3E-89 T 14-10-2018 VV2_0985 1b965d0923f786a95e64f93081c6808a 336 Pfam PF16868 NMT1-like family 32 326 1.2E-109 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VV2_0985 1b965d0923f786a95e64f93081c6808a 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 326 3.4E-102 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VV2_0985 1b965d0923f786a95e64f93081c6808a 336 SUPERFAMILY SSF53850 29 327 5.26E-63 T 14-10-2018 VV2_0985 1b965d0923f786a95e64f93081c6808a 336 Gene3D G3DSA:3.40.190.10 120 263 1.3E-89 T 14-10-2018 VV1_2706 e16869c3aa71e533b6b68e45d00fb382 249 SUPERFAMILY SSF52540 8 242 1.77E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2706 e16869c3aa71e533b6b68e45d00fb382 249 PIRSF PIRSF039085 5 248 1.4E-111 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VV1_2706 e16869c3aa71e533b6b68e45d00fb382 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2706 e16869c3aa71e533b6b68e45d00fb382 249 Pfam PF00005 ABC transporter 24 172 4.4E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2706 e16869c3aa71e533b6b68e45d00fb382 249 Gene3D G3DSA:3.40.50.300 6 249 1.5E-80 T 14-10-2018 VV1_2706 e16869c3aa71e533b6b68e45d00fb382 249 SMART SM00382 33 220 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1359 e4f03734199df272df864a96970c8e36 734 SUPERFAMILY SSF52540 76 380 5.21E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1359 e4f03734199df272df864a96970c8e36 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.17 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VV1_1359 e4f03734199df272df864a96970c8e36 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 1.0E-190 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VV1_1359 e4f03734199df272df864a96970c8e36 734 Gene3D G3DSA:3.40.50.300 187 380 2.1E-76 T 14-10-2018 VV1_1359 e4f03734199df272df864a96970c8e36 734 SUPERFAMILY SSF52540 462 633 1.66E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1359 e4f03734199df272df864a96970c8e36 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 6.7E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_1359 e4f03734199df272df864a96970c8e36 734 SMART SM00487 195 396 8.3E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_1359 e4f03734199df272df864a96970c8e36 734 Pfam PF00271 Helicase conserved C-terminal domain 514 589 5.3E-8 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1359 e4f03734199df272df864a96970c8e36 734 Gene3D G3DSA:1.10.8.630 4 113 9.3E-35 T 14-10-2018 VV1_1359 e4f03734199df272df864a96970c8e36 734 SMART SM00490 493 590 1.3E-12 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2319 c212753195e2d3d22bf71f26de680260 637 SUPERFAMILY SSF53067 222 482 6.95E-27 T 14-10-2018 VV1_2319 c212753195e2d3d22bf71f26de680260 637 Gene3D G3DSA:3.90.640.10 263 343 5.4E-35 T 14-10-2018 VV1_2319 c212753195e2d3d22bf71f26de680260 637 SUPERFAMILY SSF53067 15 208 4.78E-27 T 14-10-2018 VV1_2319 c212753195e2d3d22bf71f26de680260 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 227 240 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV1_2319 c212753195e2d3d22bf71f26de680260 637 Gene3D G3DSA:3.30.420.40 220 344 5.4E-35 T 14-10-2018 VV1_2319 c212753195e2d3d22bf71f26de680260 637 PRINTS PR00301 70kDa heat shock protein signature 15 28 4.8E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2319 c212753195e2d3d22bf71f26de680260 637 PRINTS PR00301 70kDa heat shock protein signature 166 186 4.8E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2319 c212753195e2d3d22bf71f26de680260 637 PRINTS PR00301 70kDa heat shock protein signature 233 243 4.8E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2319 c212753195e2d3d22bf71f26de680260 637 Gene3D G3DSA:3.30.420.40 17 214 5.4E-35 T 14-10-2018 VV1_2319 c212753195e2d3d22bf71f26de680260 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 19 26 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV1_2319 c212753195e2d3d22bf71f26de680260 637 Pfam PF00012 Hsp70 protein 17 345 8.1E-17 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0124 0bba06fec8ea9ab6060f88a430c0ef41 189 SUPERFAMILY SSF53955 11 187 3.94E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_0124 0bba06fec8ea9ab6060f88a430c0ef41 189 Pfam PF09374 Predicted Peptidoglycan domain 104 187 2.3E-20 T 14-10-2018 IPR018537 Peptidoglycan binding domain VV1_0124 0bba06fec8ea9ab6060f88a430c0ef41 189 Pfam PF05838 Glycosyl hydrolase 108 18 99 3.9E-15 T 14-10-2018 IPR008565 Protein of unknown function DUF847 VV1_0124 0bba06fec8ea9ab6060f88a430c0ef41 189 Gene3D G3DSA:1.20.141.10 10 188 1.6E-32 T 14-10-2018 VV2_1551 89a8960c4a2796fa3dcbdc82b6594bfd 483 Pfam PF07603 Protein of unknown function (DUF1566) 296 435 4.2E-17 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 VV1_2495 3e4039f8061e7cfb4e71d2b10784a02f 175 Pfam PF07799 Protein of unknown function (DUF1643) 21 117 4.5E-10 T 14-10-2018 IPR012441 Protein of unknown function DUF1643 VV2_1074 c1672a90b65ceb40e8e9e54f9e924f8c 308 Gene3D G3DSA:3.40.190.10 92 297 3.2E-65 T 14-10-2018 VV2_1074 c1672a90b65ceb40e8e9e54f9e924f8c 308 Pfam PF03466 LysR substrate binding domain 88 301 8.1E-45 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1074 c1672a90b65ceb40e8e9e54f9e924f8c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1074 c1672a90b65ceb40e8e9e54f9e924f8c 308 SUPERFAMILY SSF53850 89 303 1.48E-40 T 14-10-2018 VV2_1074 c1672a90b65ceb40e8e9e54f9e924f8c 308 Gene3D G3DSA:3.40.190.10 163 272 3.2E-65 T 14-10-2018 VV2_1074 c1672a90b65ceb40e8e9e54f9e924f8c 308 Gene3D G3DSA:1.10.10.10 3 91 6.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1074 c1672a90b65ceb40e8e9e54f9e924f8c 308 SUPERFAMILY SSF46785 4 85 1.66E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SUPERFAMILY SSF50249 88 174 6.86E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PIRSF PIRSF002111 1 534 1.2E-218 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SUPERFAMILY SSF50249 255 364 2.65E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Gene3D G3DSA:2.40.50.140 444 528 2.5E-20 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Gene3D G3DSA:2.40.50.140 99 178 2.9E-5 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.0E-96 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Pfam PF00575 S1 RNA binding domain 18 86 1.2E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Pfam PF00575 S1 RNA binding domain 189 260 2.7E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Pfam PF00575 S1 RNA binding domain 104 171 1.2E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Pfam PF00575 S1 RNA binding domain 362 434 2.9E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Pfam PF00575 S1 RNA binding domain 275 347 4.1E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Pfam PF00575 S1 RNA binding domain 449 520 8.9E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SUPERFAMILY SSF50249 189 277 1.42E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SMART SM00316 275 347 8.1E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SMART SM00316 190 260 7.7E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SMART SM00316 362 434 2.9E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SMART SM00316 103 171 1.8E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SMART SM00316 19 87 4.9E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SMART SM00316 449 520 1.1E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Gene3D G3DSA:2.40.50.140 6 98 6.0E-17 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SUPERFAMILY SSF50249 4 112 1.97E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 4.7E-230 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SUPERFAMILY SSF50249 429 539 7.38E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Gene3D G3DSA:2.40.50.140 269 357 2.2E-31 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 Gene3D G3DSA:2.40.50.140 358 443 9.5E-24 T 14-10-2018 VV1_2982 30f42a55003c20040d84a97bf3e5dbbe 556 SUPERFAMILY SSF50249 347 438 4.1E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1640 268265b8ef85b11054b64d6fb85f09a3 307 Pfam PF00005 ABC transporter 20 164 9.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1640 268265b8ef85b11054b64d6fb85f09a3 307 Gene3D G3DSA:3.40.50.300 1 235 1.2E-65 T 14-10-2018 VV1_1640 268265b8ef85b11054b64d6fb85f09a3 307 SUPERFAMILY SSF52540 3 232 3.48E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1640 268265b8ef85b11054b64d6fb85f09a3 307 SMART SM00382 29 213 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1640 268265b8ef85b11054b64d6fb85f09a3 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2650 65b1ccf3478acebddd22de9d62bb5527 278 Gene3D G3DSA:1.10.10.10 215 277 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2650 65b1ccf3478acebddd22de9d62bb5527 278 PIRSF PIRSF012524 1 278 3.1E-99 T 14-10-2018 IPR014464 Conserved virulence factor B VV1_2650 65b1ccf3478acebddd22de9d62bb5527 278 Pfam PF13509 S1 domain 71 132 2.1E-5 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VV1_2650 65b1ccf3478acebddd22de9d62bb5527 278 Pfam PF13509 S1 domain 4 63 4.3E-22 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 SUPERFAMILY SSF47323 455 577 1.77E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.129 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 SUPERFAMILY SSF55190 2 96 5.89E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 SMART SM01016 5 87 2.2E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 3.2E-162 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 Pfam PF05746 DALR anticodon binding domain 461 577 3.7E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 SUPERFAMILY SSF52374 111 454 1.72E-93 T 14-10-2018 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 SMART SM00836 461 577 2.1E-41 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 Gene3D G3DSA:3.40.50.620 108 454 3.1E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 3.8E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 4.5E-199 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 Gene3D G3DSA:3.30.1360.70 1 106 2.5E-33 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VV1_0145 34be27670d3c4b48333fc6fcd26bada7 577 Gene3D G3DSA:1.10.730.10 455 577 1.0E-35 T 14-10-2018 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 SUPERFAMILY SSF51120 11 203 7.1E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 27 40 48.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 5.3E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.021 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 2.6E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 59 0.0056 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Gene3D G3DSA:2.150.10.10 58 96 1.9E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Gene3D G3DSA:2.150.10.10 97 224 1.0E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 Gene3D G3DSA:2.150.10.10 2 57 2.6E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 PRINTS PR00313 NodO calcium binding signature 88 96 2.3E-12 T 14-10-2018 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 PRINTS PR00313 NodO calcium binding signature 106 114 2.3E-12 T 14-10-2018 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.3E-12 T 14-10-2018 VV1_3061 b189a58f32bfb6fe4198c9f9b9ce8880 236 PRINTS PR00313 NodO calcium binding signature 67 78 2.3E-12 T 14-10-2018 VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 81 103 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 111 126 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 PRINTS PR01021 OMPA domain signature 126 142 1.5E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 ProSitePatterns PS01068 OmpA-like domain. 113 157 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 Pfam PF00691 OmpA family 80 175 2.5E-22 T 14-10-2018 IPR006665 OmpA-like domain VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 Gene3D G3DSA:3.30.1330.60 54 181 4.8E-41 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 SUPERFAMILY SSF103088 72 181 1.44E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 181 30.793 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VV1_2171 46004e9c732ca6de3281633b5daf0dc4 181 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 78 181 1.6E-44 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 VV1_1424 3cdaafe639c11988a2022c022a636747 490 SUPERFAMILY SSF55021 338 435 3.88E-20 T 14-10-2018 VV1_1424 3cdaafe639c11988a2022c022a636747 490 Gene3D G3DSA:3.40.1160.10 47 331 1.4E-100 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1424 3cdaafe639c11988a2022c022a636747 490 PIRSF PIRSF000726 43 490 9.9E-130 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1424 3cdaafe639c11988a2022c022a636747 490 Gene3D G3DSA:3.30.70.260 421 490 3.5E-16 T 14-10-2018 VV1_1424 3cdaafe639c11988a2022c022a636747 490 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 45 489 6.2E-124 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1424 3cdaafe639c11988a2022c022a636747 490 SUPERFAMILY SSF55021 418 489 6.87E-13 T 14-10-2018 VV1_1424 3cdaafe639c11988a2022c022a636747 490 Gene3D G3DSA:1.20.120.1320 83 176 1.4E-100 T 14-10-2018 VV1_1424 3cdaafe639c11988a2022c022a636747 490 SUPERFAMILY SSF53633 46 334 1.57E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1424 3cdaafe639c11988a2022c022a636747 490 Gene3D G3DSA:3.30.70.260 351 420 1.1E-28 T 14-10-2018 VV1_1424 3cdaafe639c11988a2022c022a636747 490 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 45 489 5.2E-124 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1424 3cdaafe639c11988a2022c022a636747 490 Pfam PF00696 Amino acid kinase family 46 319 1.4E-47 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV1_1424 3cdaafe639c11988a2022c022a636747 490 ProSitePatterns PS00324 Aspartokinase signature. 47 55 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV2_0669 be81893679b85cee0e09b16ddc3a7c4e 394 SUPERFAMILY SSF52540 32 384 2.5E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0669 be81893679b85cee0e09b16ddc3a7c4e 394 PIRSF PIRSF026760 36 387 1.3E-157 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 VV2_0669 be81893679b85cee0e09b16ddc3a7c4e 394 Gene3D G3DSA:3.40.50.300 175 383 4.2E-66 T 14-10-2018 VV2_0669 be81893679b85cee0e09b16ddc3a7c4e 394 Gene3D G3DSA:3.40.50.720 28 174 3.0E-47 T 14-10-2018 VV2_0669 be81893679b85cee0e09b16ddc3a7c4e 394 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 184 372 4.5E-60 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop VV2_0669 be81893679b85cee0e09b16ddc3a7c4e 394 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 75 172 2.8E-20 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain VV1_2361 64ed8f7263d1756cf81424646e1ac520 167 Gene3D G3DSA:3.40.630.30 2 161 8.7E-28 T 14-10-2018 VV1_2361 64ed8f7263d1756cf81424646e1ac520 167 SUPERFAMILY SSF55729 12 159 3.48E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2361 64ed8f7263d1756cf81424646e1ac520 167 Pfam PF13302 Acetyltransferase (GNAT) domain 6 138 1.1E-18 T 14-10-2018 IPR000182 GNAT domain VV1_2918 c2a8ce1e11bf48176762e4506cb6d851 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.023 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VV1_2918 c2a8ce1e11bf48176762e4506cb6d851 346 SUPERFAMILY SSF53383 12 343 2.75E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2918 c2a8ce1e11bf48176762e4506cb6d851 346 Gene3D G3DSA:3.40.640.10 49 253 7.5E-120 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2918 c2a8ce1e11bf48176762e4506cb6d851 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VV1_2918 c2a8ce1e11bf48176762e4506cb6d851 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 2.4E-117 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VV1_2918 c2a8ce1e11bf48176762e4506cb6d851 346 Gene3D G3DSA:3.90.1150.10 4 336 7.5E-120 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2918 c2a8ce1e11bf48176762e4506cb6d851 346 Pfam PF00155 Aminotransferase class I and II 44 337 7.4E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 SUPERFAMILY SSF101790 288 380 1.96E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 Gene3D G3DSA:4.10.1250.10 242 290 3.1E-21 T 14-10-2018 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 Gene3D G3DSA:3.30.1360.120 16 240 1.4E-85 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 SUPERFAMILY SSF103025 15 290 1.88E-91 T 14-10-2018 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 Gene3D G3DSA:3.30.70.1400 65 148 1.4E-85 T 14-10-2018 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 15 375 2.0E-108 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 PIRSF PIRSF006487 1 381 1.2E-81 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 Pfam PF01571 Aminomethyltransferase folate-binding domain 19 263 9.5E-89 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 371 4.3E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VV2_0190 d83e4456bc3819ba7694f31314e51e70 381 Gene3D G3DSA:2.40.30.110 293 370 1.4E-26 T 14-10-2018 VV2_0571 c5ad9df3572fcb3473adb84f6f604106 210 Pfam PF01810 LysE type translocator 16 205 9.3E-27 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV2_0571 c5ad9df3572fcb3473adb84f6f604106 210 PIRSF PIRSF006324 1 209 1.3E-55 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_0208 48126af8fd270d9f67fd3b1bd84fe26e 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 1.1E-41 T 14-10-2018 VV1_0208 48126af8fd270d9f67fd3b1bd84fe26e 246 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 246 27.615 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 SMART SM01097 3 133 2.1E-93 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.798 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 3.1E-149 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 5.5E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 Gene3D G3DSA:3.50.30.20 2 151 4.0E-62 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.3E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 Gene3D G3DSA:3.40.50.880 152 378 1.8E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 SUPERFAMILY SSF52317 153 377 4.29E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 SUPERFAMILY SSF52021 4 142 9.68E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 7.1E-40 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 7.1E-40 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 7.1E-40 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 7.1E-40 T 14-10-2018 VV1_0566 021c5ad30139c3809dbfcf5f56052afa 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 7.1E-40 T 14-10-2018 VV2_0135 1664af53214914252e7a0ec6895c706e 660 SUPERFAMILY SSF56935 147 435 4.4E-7 T 14-10-2018 VV2_0135 1664af53214914252e7a0ec6895c706e 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 657 3.4E-157 T 14-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VV2_0135 1664af53214914252e7a0ec6895c706e 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 57 659 6.5E-164 T 14-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VV2_0135 1664af53214914252e7a0ec6895c706e 660 SUPERFAMILY SSF56935 425 656 6.41E-6 T 14-10-2018 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.63 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 Gene3D G3DSA:3.20.20.70 4 245 6.1E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 316 5.6E-95 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 1.1E-162 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 SUPERFAMILY SSF51395 6 319 8.06E-75 T 14-10-2018 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 PIRSF PIRSF006621 1 323 2.4E-76 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_1398 891771c5b5551c147d3e0cd9903e7ff7 326 Gene3D G3DSA:1.20.120.1460 249 325 1.4E-22 T 14-10-2018 VV1_3059 61310c0234bd3aa69a3636d5993f5edf 106 Gene3D G3DSA:3.10.450.140 5 105 1.8E-40 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VV1_3059 61310c0234bd3aa69a3636d5993f5edf 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 37.328 T 14-10-2018 IPR007376 dsDNA mimic, putative VV1_3059 61310c0234bd3aa69a3636d5993f5edf 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.6E-45 T 14-10-2018 IPR007376 dsDNA mimic, putative VV1_3059 61310c0234bd3aa69a3636d5993f5edf 106 PIRSF PIRSF004916 1 105 2.2E-51 T 14-10-2018 IPR007376 dsDNA mimic, putative VV1_3059 61310c0234bd3aa69a3636d5993f5edf 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 18 104 1.0E-44 T 14-10-2018 IPR007376 dsDNA mimic, putative VV1_3059 61310c0234bd3aa69a3636d5993f5edf 106 SUPERFAMILY SSF102816 3 105 5.89E-48 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily VV2_0025 cf98ba1e05fb2e4d65e8aa0c871eea5f 316 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 9 151 2.4E-18 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase VV2_0025 cf98ba1e05fb2e4d65e8aa0c871eea5f 316 Gene3D G3DSA:3.20.80.10 162 312 8.5E-22 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_0025 cf98ba1e05fb2e4d65e8aa0c871eea5f 316 SUPERFAMILY SSF55961 10 149 3.67E-16 T 14-10-2018 VV2_0025 cf98ba1e05fb2e4d65e8aa0c871eea5f 316 SUPERFAMILY SSF55136 167 304 3.5E-10 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_0025 cf98ba1e05fb2e4d65e8aa0c871eea5f 316 Gene3D G3DSA:3.30.530.20 6 157 2.3E-13 T 14-10-2018 IPR023393 START-like domain superfamily VV1_0914 aa6d2e4f317ee1b2f24dd6e59f367102 177 Pfam PF13358 DDE superfamily endonuclease 7 146 2.0E-27 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VV1_0914 aa6d2e4f317ee1b2f24dd6e59f367102 177 Gene3D G3DSA:3.30.420.470 4 171 1.0E-12 T 14-10-2018 VV1_2071 40c1019df610666854cee79e422773cd 291 Pfam PF01636 Phosphotransferase enzyme family 30 216 4.1E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VV1_2071 40c1019df610666854cee79e422773cd 291 SUPERFAMILY SSF56112 26 269 5.83E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV1_2071 40c1019df610666854cee79e422773cd 291 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 283 9.3E-107 T 14-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 VV1_2071 40c1019df610666854cee79e422773cd 291 Gene3D G3DSA:3.90.1200.10 106 287 2.3E-13 T 14-10-2018 VV1_1052 9ef09f4a5a185506309633abd750c5fa 189 SUPERFAMILY SSF57783 16 64 9.86E-15 T 14-10-2018 VV1_1052 9ef09f4a5a185506309633abd750c5fa 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 57 3.5E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VV1_1052 9ef09f4a5a185506309633abd750c5fa 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 4.4E-17 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VV1_1052 9ef09f4a5a185506309633abd750c5fa 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 116 152 6.2E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VV1_1052 9ef09f4a5a185506309633abd750c5fa 189 SUPERFAMILY SSF57783 66 109 3.57E-14 T 14-10-2018 VV1_1052 9ef09f4a5a185506309633abd750c5fa 189 Gene3D G3DSA:3.30.65.10 62 111 6.2E-8 T 14-10-2018 VV1_1052 9ef09f4a5a185506309633abd750c5fa 189 Gene3D G3DSA:3.30.65.10 11 61 3.8E-9 T 14-10-2018 VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 366 482 5.3E-15 T 14-10-2018 IPR000014 PAS domain VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 SUPERFAMILY SSF55073 492 646 1.8E-45 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 SMART SM00091 246 312 1.9 T 14-10-2018 IPR000014 PAS domain VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 SMART SM00091 361 427 1.4E-11 T 14-10-2018 IPR000014 PAS domain VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 SUPERFAMILY SSF158472 181 227 1.44E-5 T 14-10-2018 VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 SMART SM00267 476 647 3.3E-58 T 14-10-2018 IPR000160 GGDEF domain VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 487 642 5.1E-45 T 14-10-2018 IPR000160 GGDEF domain VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 Pfam PF00989 PAS fold 366 410 1.5E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 Gene3D G3DSA:3.30.450.20 242 350 5.8E-8 T 14-10-2018 VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 Pfam PF13426 PAS domain 258 352 0.005 T 14-10-2018 IPR000014 PAS domain VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 Gene3D G3DSA:3.30.450.20 358 479 2.7E-16 T 14-10-2018 VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 644 6.5E-46 T 14-10-2018 IPR000160 GGDEF domain VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 SUPERFAMILY SSF55785 349 451 8.77E-16 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 Gene3D G3DSA:3.30.70.270 480 649 2.4E-54 T 14-10-2018 VV2_0275 9e331c3d5ffc277b2648f6b0b2a0cfc0 662 Pfam PF17152 Periplasmic sensor domain 44 139 3.1E-8 T 14-10-2018 IPR033417 Periplasmic sensor domain CHASE8 VV1_2599 8631ee44e9634efe8120388b41d93b6b 245 Pfam PF02146 Sir2 family 13 186 2.4E-48 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 VV1_2599 8631ee44e9634efe8120388b41d93b6b 245 Gene3D G3DSA:3.40.50.1220 8 225 1.1E-79 T 14-10-2018 VV1_2599 8631ee44e9634efe8120388b41d93b6b 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.293 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VV1_2599 8631ee44e9634efe8120388b41d93b6b 245 Gene3D G3DSA:3.30.1600.10 22 158 1.1E-79 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VV1_2599 8631ee44e9634efe8120388b41d93b6b 245 SUPERFAMILY SSF52467 6 235 1.16E-72 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV1_0043 fb9900583191caf8a242742c132376a6 356 Gene3D G3DSA:1.20.58.1390 101 315 2.8E-111 T 14-10-2018 VV1_0043 fb9900583191caf8a242742c132376a6 356 Pfam PF00891 O-methyltransferase 168 338 3.9E-14 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 VV1_0043 fb9900583191caf8a242742c132376a6 356 SUPERFAMILY SSF46785 19 99 2.18E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0043 fb9900583191caf8a242742c132376a6 356 SUPERFAMILY SSF53335 99 341 3.41E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0043 fb9900583191caf8a242742c132376a6 356 Gene3D G3DSA:1.10.10.10 2 98 5.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0043 fb9900583191caf8a242742c132376a6 356 PIRSF PIRSF005739 3 347 9.8E-11 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 VV1_0043 fb9900583191caf8a242742c132376a6 356 Gene3D G3DSA:3.40.50.150 166 350 2.8E-111 T 14-10-2018 VV1_2322 957d3b099dccf2b49033aa8b6b5b3e3f 176 SUPERFAMILY SSF53098 4 175 3.51E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2322 957d3b099dccf2b49033aa8b6b5b3e3f 176 Gene3D G3DSA:3.30.420.10 1 176 4.3E-37 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2322 957d3b099dccf2b49033aa8b6b5b3e3f 176 Pfam PF00929 Exonuclease 7 171 2.6E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_2322 957d3b099dccf2b49033aa8b6b5b3e3f 176 SMART SM00479 5 176 1.7E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 Pfam PF00245 Alkaline phosphatase 26 503 3.6E-83 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 Gene3D G3DSA:3.30.40.70 439 462 5.8E-20 T 14-10-2018 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 SMART SM00098 27 415 3.7E-55 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 SUPERFAMILY SSF53649 11 504 2.38E-112 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 Gene3D G3DSA:1.10.1200.140 388 438 6.7E-22 T 14-10-2018 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 6.5E-38 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 Gene3D G3DSA:3.40.720.10 463 525 2.9E-7 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 Gene3D G3DSA:3.40.720.10 24 371 1.5E-135 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_2018 c35ed761d9980e09a2dc4f349bd9a2f3 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 Gene3D G3DSA:3.40.50.300 4 278 3.0E-81 T 14-10-2018 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 Gene3D G3DSA:3.40.50.300 279 541 1.1E-84 T 14-10-2018 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 SMART SM00382 312 504 4.6E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 SMART SM00382 35 235 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 SUPERFAMILY SSF52540 6 256 2.49E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 Pfam PF00005 ABC transporter 304 455 2.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 SUPERFAMILY SSF52540 294 526 8.23E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 Pfam PF00005 ABC transporter 26 185 3.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 538 0.001 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_0794 0ba8fdfa68614d3df96443bd4f2ee6eb 542 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 267 8.7E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 9.7E-152 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 Gene3D G3DSA:3.40.640.10 59 304 2.4E-151 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 Gene3D G3DSA:3.90.1150.10 25 392 2.4E-151 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 SUPERFAMILY SSF53383 16 400 2.31E-129 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.105 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 PIRSF PIRSF000521 27 155 2.3E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 PIRSF PIRSF000521 172 402 3.0E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.5E-207 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VV1_1313 a91866fa1acf7b8c5975704466fbfeb6 403 Pfam PF00202 Aminotransferase class-III 22 399 3.4E-127 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 SMART SM00861 353 524 7.7E-68 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 Gene3D G3DSA:3.40.50.920 537 663 3.4E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 332 8.1E-168 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 SUPERFAMILY SSF52922 532 663 8.64E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 SUPERFAMILY SSF52518 4 319 3.75E-121 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.9E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 4.1E-21 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 Gene3D G3DSA:3.40.50.970 1 324 4.4E-133 T 14-10-2018 VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 SUPERFAMILY SSF52518 332 525 1.62E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV2_0553 063fcd4d6520f23142979f3f5b9dd7d4 663 Gene3D G3DSA:3.40.50.970 325 536 1.3E-85 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Gene3D G3DSA:3.40.190.10 254 457 8.0E-22 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 SUPERFAMILY SSF53850 41 209 3.57E-23 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 SUPERFAMILY SSF53850 252 465 9.51E-26 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Gene3D G3DSA:3.30.70.270 502 655 1.0E-31 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Gene3D G3DSA:3.40.190.10 41 194 4.8E-18 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 SMART SM00062 26 220 3.4E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 SUPERFAMILY SSF55073 513 652 1.88E-27 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 505 653 1.7E-27 T 14-10-2018 IPR000160 GGDEF domain VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Gene3D G3DSA:3.40.190.10 99 184 4.8E-18 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Gene3D G3DSA:3.40.190.10 333 432 8.0E-22 T 14-10-2018 VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 185 5.1E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 SMART SM00267 497 656 5.2E-23 T 14-10-2018 IPR000160 GGDEF domain VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Pfam PF00990 Diguanylate cyclase, GGDEF domain 509 653 1.8E-26 T 14-10-2018 IPR000160 GGDEF domain VV1_3146 dd0fe8de8f129a9a027ccb35cb99fb5d 657 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 457 1.4E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0042 98274a0add0f66c2740a91bc0472503b 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 9.2E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 528 9.2E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 SMART SM00304 303 357 3.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 Gene3D G3DSA:3.30.450.20 64 174 4.2E-24 T 14-10-2018 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 600 3.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 SUPERFAMILY SSF103190 119 185 1.62E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_0042 98274a0add0f66c2740a91bc0472503b 635 Gene3D G3DSA:3.30.450.20 57 276 4.2E-24 T 14-10-2018 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 SUPERFAMILY SSF58104 325 634 3.14E-72 T 14-10-2018 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 Gene3D G3DSA:1.10.287.950 304 635 2.6E-67 T 14-10-2018 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 Pfam PF02743 Cache domain 35 265 2.8E-21 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_0042 98274a0add0f66c2740a91bc0472503b 635 SMART SM00283 372 633 2.0E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2266 b09d8fb7c0af6aeb3eca7c09c667b17f 507 PIRSF PIRSF001394 1 507 3.7E-214 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VV1_2266 b09d8fb7c0af6aeb3eca7c09c667b17f 507 SUPERFAMILY SSF117457 317 489 1.23E-63 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VV1_2266 b09d8fb7c0af6aeb3eca7c09c667b17f 507 Pfam PF05683 Fumarase C-terminus 289 490 1.9E-83 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VV1_2266 b09d8fb7c0af6aeb3eca7c09c667b17f 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.2E-61 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VV1_2266 b09d8fb7c0af6aeb3eca7c09c667b17f 507 Gene3D G3DSA:3.20.130.10 306 490 7.8E-62 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VV1_2266 b09d8fb7c0af6aeb3eca7c09c667b17f 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.4E-97 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VV1_2266 b09d8fb7c0af6aeb3eca7c09c667b17f 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 1.8E-50 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VV2_0569 21f428376a54f59ff607b225c71abb69 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 1.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 1.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 1.0E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 SUPERFAMILY SSF53738 301 445 4.32E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 SUPERFAMILY SSF55957 434 540 2.88E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Gene3D G3DSA:3.30.310.50 448 551 1.2E-8 T 14-10-2018 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 537 3.8E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 312 6.7E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 SUPERFAMILY SSF53738 203 309 3.53E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 4.8E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Gene3D G3DSA:3.40.120.10 203 322 1.4E-20 T 14-10-2018 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 439 1.2E-17 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Gene3D G3DSA:3.40.120.10 323 443 3.6E-31 T 14-10-2018 VV2_0569 21f428376a54f59ff607b225c71abb69 568 SUPERFAMILY SSF53738 30 218 8.24E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VV2_0569 21f428376a54f59ff607b225c71abb69 568 Gene3D G3DSA:3.40.120.10 32 184 4.9E-48 T 14-10-2018 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 Gene3D G3DSA:3.40.50.970 1 175 3.6E-67 T 14-10-2018 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.1E-39 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 SUPERFAMILY SSF52518 1 178 1.72E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 Gene3D G3DSA:3.40.50.970 350 548 4.2E-67 T 14-10-2018 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.8E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.0E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 Gene3D G3DSA:3.40.50.1220 180 349 1.5E-51 T 14-10-2018 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 SUPERFAMILY SSF52518 358 545 2.5E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 SUPERFAMILY SSF52467 182 342 5.57E-55 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 2.8E-210 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VV1_1032 16561f9b48b44986fd466024ae7b6c4b 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VV2_0863 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-31 T 14-10-2018 IPR023635 Peptide deformylase VV2_0863 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.2E-31 T 14-10-2018 IPR023635 Peptide deformylase VV2_0863 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.2E-31 T 14-10-2018 IPR023635 Peptide deformylase VV2_0863 09861b72745271ad1ac6eae45404d50f 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.2E-31 T 14-10-2018 IPR023635 Peptide deformylase VV2_0863 09861b72745271ad1ac6eae45404d50f 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.2E-49 T 14-10-2018 IPR023635 Peptide deformylase VV2_0863 09861b72745271ad1ac6eae45404d50f 168 PIRSF PIRSF004749 1 168 6.1E-53 T 14-10-2018 IPR023635 Peptide deformylase VV2_0863 09861b72745271ad1ac6eae45404d50f 168 SUPERFAMILY SSF56420 2 165 3.01E-57 T 14-10-2018 IPR036821 Peptide deformylase superfamily VV2_0863 09861b72745271ad1ac6eae45404d50f 168 Gene3D G3DSA:3.90.45.10 1 168 2.5E-66 T 14-10-2018 IPR036821 Peptide deformylase superfamily VV2_0863 09861b72745271ad1ac6eae45404d50f 168 Pfam PF01327 Polypeptide deformylase 4 152 1.6E-47 T 14-10-2018 IPR023635 Peptide deformylase VV2_0863 09861b72745271ad1ac6eae45404d50f 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.876 T 14-10-2018 IPR023635 Peptide deformylase VV1_1797 565a4b1c88d7376421a713be51427f67 704 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 702 1.1E-212 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VV1_1797 565a4b1c88d7376421a713be51427f67 704 Pfam PF13538 UvrD-like helicase C-terminal domain 631 677 1.0E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain VV1_1797 565a4b1c88d7376421a713be51427f67 704 Pfam PF13604 AAA domain 238 398 2.1E-31 T 14-10-2018 VV1_1797 565a4b1c88d7376421a713be51427f67 704 SUPERFAMILY SSF52540 16 443 4.03E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1797 565a4b1c88d7376421a713be51427f67 704 SUPERFAMILY SSF52540 363 701 5.05E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1797 565a4b1c88d7376421a713be51427f67 704 Gene3D G3DSA:3.40.50.300 203 438 1.3E-74 T 14-10-2018 VV1_1797 565a4b1c88d7376421a713be51427f67 704 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 23 700 49.413 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VV1_1797 565a4b1c88d7376421a713be51427f67 704 Gene3D G3DSA:1.10.10.1020 9 125 6.0E-23 T 14-10-2018 VV1_1797 565a4b1c88d7376421a713be51427f67 704 Gene3D G3DSA:3.40.50.300 568 691 5.6E-27 T 14-10-2018 VV1_1797 565a4b1c88d7376421a713be51427f67 704 Gene3D G3DSA:3.40.50.300 448 567 4.7E-23 T 14-10-2018 VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 SUPERFAMILY SSF47413 2 60 3.12E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 Gene3D G3DSA:1.10.260.40 1 55 2.7E-22 T 14-10-2018 VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 SMART SM00354 1 71 5.9E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 SUPERFAMILY SSF53822 61 331 2.57E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 Gene3D G3DSA:3.40.50.2300 56 305 5.4E-74 T 14-10-2018 VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 Gene3D G3DSA:3.40.50.2300 160 289 5.4E-74 T 14-10-2018 VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.9E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1297 11904b1010ef5d284755c5c06f7a5aff 336 Pfam PF13377 Periplasmic binding protein-like domain 169 328 3.0E-34 T 14-10-2018 VV1_2492 c388f78df892c0f24bbe38ae7773623a 180 Pfam PF11665 Protein of unknown function (DUF3265) 1 19 8.4E-7 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VV2_0510 ea935d9ace3c518dbeaccf43cb22837a 465 Pfam PF07690 Major Facilitator Superfamily 35 396 3.6E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0510 ea935d9ace3c518dbeaccf43cb22837a 465 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 1.0E-139 T 14-10-2018 VV2_0510 ea935d9ace3c518dbeaccf43cb22837a 465 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VV2_0510 ea935d9ace3c518dbeaccf43cb22837a 465 PIRSF PIRSF002808 9 460 8.8E-109 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VV2_0510 ea935d9ace3c518dbeaccf43cb22837a 465 Gene3D G3DSA:1.20.1250.20 28 230 9.5E-34 T 14-10-2018 VV2_0510 ea935d9ace3c518dbeaccf43cb22837a 465 SUPERFAMILY SSF103473 17 450 1.57E-59 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0510 ea935d9ace3c518dbeaccf43cb22837a 465 Gene3D G3DSA:1.20.1250.20 246 459 3.4E-38 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:1.10.287.470 161 175 5.4E-10 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.50.100 195 244 1.6E-25 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.30.170 245 318 1.6E-25 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.30.170 112 125 5.4E-10 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.50.320 414 485 5.1E-21 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.50.320 493 564 9.2E-13 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.420.20 324 413 2.0E-23 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 SUPERFAMILY SSF111369 130 322 3.92E-15 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 212 390 7.0E-32 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 4.7E-77 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.50.100 126 160 5.4E-10 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Gene3D G3DSA:2.40.420.20 100 111 5.4E-10 T 14-10-2018 VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Pfam PF11604 Copper binding periplasmic protein CusF 417 483 2.4E-24 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF VV2_0851 52f6077705ba8f668fb5d4637acd3522 567 Pfam PF11604 Copper binding periplasmic protein CusF 497 562 8.4E-16 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF VV2_1203 8c5cdec4b7edb9e7fbafeb324853dab7 667 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 303 649 1.6E-118 T 14-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VV2_1203 8c5cdec4b7edb9e7fbafeb324853dab7 667 Pfam PF05013 N-formylglutamate amidohydrolase 42 229 3.3E-19 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase VV2_1203 8c5cdec4b7edb9e7fbafeb324853dab7 667 SUPERFAMILY SSF53187 36 230 1.51E-14 T 14-10-2018 VV2_1203 8c5cdec4b7edb9e7fbafeb324853dab7 667 SMART SM01154 328 666 4.5E-151 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VV2_1203 8c5cdec4b7edb9e7fbafeb324853dab7 667 Gene3D G3DSA:3.40.630.40 33 261 2.5E-6 T 14-10-2018 VV2_1203 8c5cdec4b7edb9e7fbafeb324853dab7 667 Pfam PF08014 Domain of unknown function (DUF1704) 329 663 6.9E-108 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 SUPERFAMILY SSF81464 25 117 2.13E-27 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 SUPERFAMILY SSF49503 115 315 3.04E-52 T 14-10-2018 IPR008972 Cupredoxin VV2_0568 ef8781925708f6bf9ecf94452a293636 386 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 3.0E-60 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 8.4E-40 T 14-10-2018 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 8.4E-40 T 14-10-2018 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 8.4E-40 T 14-10-2018 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 8.4E-40 T 14-10-2018 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 8.4E-40 T 14-10-2018 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 8.4E-40 T 14-10-2018 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 8.4E-40 T 14-10-2018 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 25 108 6.5E-15 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 282 356 2.3E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 Gene3D G3DSA:1.10.760.10 263 384 2.2E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 Gene3D G3DSA:2.60.40.420 120 259 1.9E-53 T 14-10-2018 IPR008972 Cupredoxin VV2_0568 ef8781925708f6bf9ecf94452a293636 386 Gene3D G3DSA:1.10.287.90 25 119 1.2E-25 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 2.7E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 SUPERFAMILY SSF46626 265 371 2.58E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0568 ef8781925708f6bf9ecf94452a293636 386 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_3056 50e4517f2b0f4a98ee765b91f9a31c2f 698 SMART SM00052 436 680 4.0E-59 T 14-10-2018 IPR001633 EAL domain VV1_3056 50e4517f2b0f4a98ee765b91f9a31c2f 698 SUPERFAMILY SSF141868 451 688 1.44E-63 T 14-10-2018 IPR035919 EAL domain superfamily VV1_3056 50e4517f2b0f4a98ee765b91f9a31c2f 698 Pfam PF02378 Phosphotransferase system, EIIC 31 333 7.4E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV1_3056 50e4517f2b0f4a98ee765b91f9a31c2f 698 Gene3D G3DSA:3.20.20.450 443 690 1.1E-67 T 14-10-2018 IPR035919 EAL domain superfamily VV1_3056 50e4517f2b0f4a98ee765b91f9a31c2f 698 Pfam PF00563 EAL domain 450 674 1.4E-59 T 14-10-2018 IPR001633 EAL domain VV2_1434 d74cf20193254ea1febc68f176386433 198 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 197 8.4E-63 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VV2_1434 d74cf20193254ea1febc68f176386433 198 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 26.184 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VV2_1434 d74cf20193254ea1febc68f176386433 198 Gene3D G3DSA:3.40.1280.10 1 198 8.8E-57 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV2_1434 d74cf20193254ea1febc68f176386433 198 SUPERFAMILY SSF75217 1 197 2.35E-63 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 577 8.4E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 SMART SM00388 352 417 4.3E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Pfam PF02743 Cache domain 41 227 1.4E-12 T 14-10-2018 IPR033479 Double Cache domain 1 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Gene3D G3DSA:3.40.50.2300 589 718 3.1E-34 T 14-10-2018 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Gene3D G3DSA:1.10.287.130 317 415 6.2E-26 T 14-10-2018 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 SUPERFAMILY SSF47384 340 418 2.75E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 1.9E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Gene3D G3DSA:3.30.450.20 37 204 1.4E-23 T 14-10-2018 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Pfam PF00072 Response regulator receiver domain 601 712 1.9E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 SMART SM00448 598 712 1.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 Gene3D G3DSA:3.30.565.10 416 581 4.8E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 SUPERFAMILY SSF55874 406 577 1.03E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 SMART SM00387 464 579 2.4E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 SUPERFAMILY SSF52172 596 731 1.99E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2179 ea3770c471ed9353ce50d6d24a31ef15 805 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 165 325 1.5E-50 T 14-10-2018 IPR000160 GGDEF domain VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 SUPERFAMILY SSF55073 169 327 1.41E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 Gene3D G3DSA:3.40.50.2300 1 141 2.9E-31 T 14-10-2018 VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 SMART SM00267 153 329 5.3E-64 T 14-10-2018 IPR000160 GGDEF domain VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 SMART SM00448 5 119 8.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 Pfam PF00072 Response regulator receiver domain 8 112 7.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 SUPERFAMILY SSF52172 3 144 5.69E-34 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 Gene3D G3DSA:3.30.70.270 149 327 1.8E-59 T 14-10-2018 VV2_0379 009d73c8c9e866ebfa1f9583728c45f2 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 327 5.7E-53 T 14-10-2018 IPR000160 GGDEF domain VV1_2791 ae85416b9993b0d70a3c448c496d7864 232 Pfam PF08732 HIM1 80 168 3.3E-10 T 14-10-2018 IPR014843 Protein Him1/Fmp52 VV1_2791 ae85416b9993b0d70a3c448c496d7864 232 SUPERFAMILY SSF51735 6 227 3.28E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2791 ae85416b9993b0d70a3c448c496d7864 232 Gene3D G3DSA:3.40.50.720 2 231 4.3E-53 T 14-10-2018 VV2_0977 b9cdd3ef8147e513ed6ec0616334265e 218 Pfam PF00805 Pentapeptide repeats (8 copies) 55 83 0.0036 T 14-10-2018 IPR001646 Pentapeptide repeat VV2_0977 b9cdd3ef8147e513ed6ec0616334265e 218 Pfam PF00805 Pentapeptide repeats (8 copies) 12 42 3.7E-6 T 14-10-2018 IPR001646 Pentapeptide repeat VV2_0977 b9cdd3ef8147e513ed6ec0616334265e 218 SUPERFAMILY SSF141571 2 51 7.46E-10 T 14-10-2018 VV2_0977 b9cdd3ef8147e513ed6ec0616334265e 218 Gene3D G3DSA:2.160.20.80 3 217 4.2E-63 T 14-10-2018 VV2_0977 b9cdd3ef8147e513ed6ec0616334265e 218 SUPERFAMILY SSF141571 53 216 1.67E-38 T 14-10-2018 VV2_0977 b9cdd3ef8147e513ed6ec0616334265e 218 Pfam PF13599 Pentapeptide repeats (9 copies) 98 166 1.5E-11 T 14-10-2018 IPR001646 Pentapeptide repeat VV2_0340 61de5659625251539152dc7a97955db1 1064 SUPERFAMILY SSF82693 164 351 6.8E-10 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:3.30.70.1320 158 355 2.6E-226 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:3.30.70.1430 62 841 2.6E-226 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 SUPERFAMILY SSF82714 746 830 1.09E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0340 61de5659625251539152dc7a97955db1 1064 PRINTS PR00702 Acriflavin resistance protein family signature 413 437 7.1E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0340 61de5659625251539152dc7a97955db1 1064 PRINTS PR00702 Acriflavin resistance protein family signature 492 515 7.1E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0340 61de5659625251539152dc7a97955db1 1064 PRINTS PR00702 Acriflavin resistance protein family signature 32 56 7.1E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0340 61de5659625251539152dc7a97955db1 1064 PRINTS PR00702 Acriflavin resistance protein family signature 385 406 7.1E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0340 61de5659625251539152dc7a97955db1 1064 PRINTS PR00702 Acriflavin resistance protein family signature 60 78 7.1E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0340 61de5659625251539152dc7a97955db1 1064 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 7.1E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0340 61de5659625251539152dc7a97955db1 1064 SUPERFAMILY SSF82866 320 518 9.94E-38 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:3.30.2090.10 203 293 2.6E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0340 61de5659625251539152dc7a97955db1 1064 SUPERFAMILY SSF82693 582 696 1.44E-13 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:1.20.1640.10 35 532 2.6E-226 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:1.20.1640.10 533 1055 2.6E-226 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:3.30.70.1430 584 693 2.6E-226 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 SUPERFAMILY SSF82714 209 290 8.11E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0340 61de5659625251539152dc7a97955db1 1064 Pfam PF00873 AcrB/AcrD/AcrF family 29 1057 5.3E-158 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:3.30.70.1440 694 903 2.6E-226 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 Gene3D G3DSA:3.30.2090.10 743 833 2.6E-226 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0340 61de5659625251539152dc7a97955db1 1064 SUPERFAMILY SSF82866 835 1062 5.23E-42 T 14-10-2018 VV2_0340 61de5659625251539152dc7a97955db1 1064 SUPERFAMILY SSF82693 62 153 4.01E-19 T 14-10-2018 VV1_0390 ad495ea5bf35e6ad47e1609905a05c80 137 Pfam PF00717 Peptidase S24-like 46 88 9.7E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VV1_0390 ad495ea5bf35e6ad47e1609905a05c80 137 Gene3D G3DSA:2.10.109.10 14 126 1.5E-31 T 14-10-2018 VV1_0390 ad495ea5bf35e6ad47e1609905a05c80 137 SUPERFAMILY SSF51306 3 124 1.74E-23 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VV1_1794 0e1100771cf667077f243792aefa9fce 607 SUPERFAMILY SSF53649 246 571 6.8E-56 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_1794 0e1100771cf667077f243792aefa9fce 607 Pfam PF00884 Sulfatase 250 521 1.5E-32 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV1_1794 0e1100771cf667077f243792aefa9fce 607 PIRSF PIRSF004950 1 606 1.6E-235 T 14-10-2018 IPR012159 Inner membrane protein YejM VV1_1794 0e1100771cf667077f243792aefa9fce 607 Gene3D G3DSA:3.40.720.10 241 536 1.5E-51 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_1794 0e1100771cf667077f243792aefa9fce 607 Pfam PF11893 Domain of unknown function (DUF3413) 2 242 6.5E-59 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 SUPERFAMILY SSF56281 1 441 1.31E-121 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 SMART SM00849 13 232 3.5E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 Gene3D G3DSA:3.40.50.10890 216 404 4.4E-130 T 14-10-2018 VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 Pfam PF10996 Beta-Casp domain 248 378 7.3E-27 T 14-10-2018 IPR022712 Beta-Casp domain VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 SMART SM01027 248 378 3.4E-54 T 14-10-2018 IPR022712 Beta-Casp domain VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 Pfam PF00753 Metallo-beta-lactamase superfamily 16 194 9.1E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 392 440 6.6E-13 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VV1_0769 d35a2f83f266a192ed48369a63cf606a 446 Gene3D G3DSA:3.60.15.10 6 439 4.4E-130 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_0357 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF53067 186 381 9.72E-66 T 14-10-2018 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:1.20.1270.10 523 602 5.1E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF100920 383 539 4.71E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 5 378 2.3E-167 T 14-10-2018 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF100934 534 607 3.88E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.90.640.10 228 315 2.3E-167 T 14-10-2018 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.362 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 SUPERFAMILY SSF53067 1 182 2.49E-66 T 14-10-2018 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 Pfam PF00012 Hsp70 protein 4 601 1.8E-264 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.8E-286 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:2.60.34.10 382 522 9.2E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 7.3E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0357 db9f022f21899a17e8c4f2470e501071 636 Gene3D G3DSA:3.30.420.40 179 365 2.3E-167 T 14-10-2018 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.9E-65 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Pfam PF07517 SecA DEAD-like domain 7 403 2.9E-133 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Pfam PF02810 SEC-C motif 887 905 2.0E-10 T 14-10-2018 IPR004027 SEC-C motif VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 SUPERFAMILY SSF52540 5 416 1.31E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 ProSitePatterns PS01312 SecA family signature. 501 516 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 SMART SM00957 6 403 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Pfam PF01043 SecA preprotein cross-linking domain 232 359 3.0E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Gene3D G3DSA:3.40.50.300 22 416 2.4E-176 T 14-10-2018 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Gene3D G3DSA:3.40.50.300 418 620 3.1E-87 T 14-10-2018 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Gene3D G3DSA:3.90.1440.10 229 369 2.4E-176 T 14-10-2018 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Gene3D G3DSA:1.10.3060.10 621 833 1.4E-75 T 14-10-2018 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 SMART SM00958 228 359 3.1E-81 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 SUPERFAMILY SSF81767 227 369 1.22E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 SUPERFAMILY SSF81886 620 895 1.96E-82 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.01 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VV1_0569 f668f186fe56d0854a796e190d9ff8fb 907 SUPERFAMILY SSF52540 418 610 2.01E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0149 360289532495f6998fe4709d3284fefa 538 SUPERFAMILY SSF53649 40 487 7.41E-122 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_0149 360289532495f6998fe4709d3284fefa 538 Pfam PF00884 Sulfatase 44 370 8.6E-66 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV2_0149 360289532495f6998fe4709d3284fefa 538 Gene3D G3DSA:3.40.720.10 41 445 2.9E-99 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 Pfam PF00155 Aminotransferase class I and II 30 395 1.2E-82 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 Gene3D G3DSA:3.40.640.10 63 303 3.3E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 Gene3D G3DSA:3.90.1150.10 8 395 3.3E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 SUPERFAMILY SSF53383 1 398 2.2E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 PRINTS PR00799 Aspartate aminotransferase signature 344 362 1.0E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 PRINTS PR00799 Aspartate aminotransferase signature 209 221 1.0E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 PRINTS PR00799 Aspartate aminotransferase signature 178 197 1.0E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 PRINTS PR00799 Aspartate aminotransferase signature 276 301 1.0E-37 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV1_2248 7ff2fad54e9b23abc0cca793ecabd230 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VV1_0402 3979028de3ec2b931dcf23a9567cb7af 156 Pfam PF01381 Helix-turn-helix 84 135 8.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_0402 3979028de3ec2b931dcf23a9567cb7af 156 Gene3D G3DSA:1.10.260.40 79 148 1.7E-7 T 14-10-2018 VV1_0402 3979028de3ec2b931dcf23a9567cb7af 156 SUPERFAMILY SSF47413 80 140 1.13E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_0402 3979028de3ec2b931dcf23a9567cb7af 156 SMART SM00530 83 139 9.3E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 SUPERFAMILY SSF118215 30 444 1.11E-82 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 Gene3D G3DSA:1.10.3860.10 21 463 8.9E-96 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 2.2E-90 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.5E-14 T 14-10-2018 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 2.5E-14 T 14-10-2018 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.5E-14 T 14-10-2018 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 2.5E-14 T 14-10-2018 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 2.5E-14 T 14-10-2018 VV1_0166 920863343ccca02160ffbe951cabd4a1 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.5E-14 T 14-10-2018 VV1_0409 24d74102eec8c39fba8d3861109ff11c 328 Pfam PF01300 Telomere recombination 27 203 1.7E-56 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VV1_0409 24d74102eec8c39fba8d3861109ff11c 328 PIRSF PIRSF004930 5 328 8.3E-112 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 VV1_0409 24d74102eec8c39fba8d3861109ff11c 328 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 325 3.1E-16 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain VV1_0409 24d74102eec8c39fba8d3861109ff11c 328 SUPERFAMILY SSF55821 20 213 4.27E-62 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VV1_0409 24d74102eec8c39fba8d3861109ff11c 328 Gene3D G3DSA:3.90.870.10 10 219 5.5E-78 T 14-10-2018 VV1_0409 24d74102eec8c39fba8d3861109ff11c 328 Gene3D G3DSA:3.40.50.11030 220 328 8.7E-10 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily VV1_0409 24d74102eec8c39fba8d3861109ff11c 328 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 18 211 8.0E-60 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VV1_1039 8a63630586dd0172eb175718816646d8 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.7E-45 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VV1_1039 8a63630586dd0172eb175718816646d8 88 Gene3D G3DSA:1.10.1580.20 1 88 8.0E-44 T 14-10-2018 IPR038134 YihD-like superfamily VV1_1039 8a63630586dd0172eb175718816646d8 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 5.0E-40 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 VV1_2583 c7994b5ef0033103836710c32b3bfb15 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 586 3.9E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2583 c7994b5ef0033103836710c32b3bfb15 620 SUPERFAMILY SSF58104 311 620 5.89E-68 T 14-10-2018 VV1_2583 c7994b5ef0033103836710c32b3bfb15 620 Gene3D G3DSA:1.10.287.950 289 620 5.5E-63 T 14-10-2018 VV1_2583 c7994b5ef0033103836710c32b3bfb15 620 SMART SM00283 358 619 1.6E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2583 c7994b5ef0033103836710c32b3bfb15 620 SMART SM00304 289 343 2.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2583 c7994b5ef0033103836710c32b3bfb15 620 Pfam PF00672 HAMP domain 289 339 1.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0344 652d529497555c50997af41dbdd83935 376 Gene3D G3DSA:3.40.50.720 180 318 1.7E-153 T 14-10-2018 VV1_0344 652d529497555c50997af41dbdd83935 376 SMART SM00829 16 373 0.0024 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VV1_0344 652d529497555c50997af41dbdd83935 376 SUPERFAMILY SSF50129 2 193 4.72E-73 T 14-10-2018 IPR011032 GroES-like superfamily VV1_0344 652d529497555c50997af41dbdd83935 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VV1_0344 652d529497555c50997af41dbdd83935 376 SUPERFAMILY SSF50129 324 375 3.95E-11 T 14-10-2018 IPR011032 GroES-like superfamily VV1_0344 652d529497555c50997af41dbdd83935 376 SUPERFAMILY SSF51735 166 339 1.56E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0344 652d529497555c50997af41dbdd83935 376 Gene3D G3DSA:3.90.180.10 12 370 1.7E-153 T 14-10-2018 VV1_0344 652d529497555c50997af41dbdd83935 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 8.0E-225 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 VV1_0344 652d529497555c50997af41dbdd83935 376 Pfam PF00107 Zinc-binding dehydrogenase 203 326 7.7E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VV1_0344 652d529497555c50997af41dbdd83935 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 3.2E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 Gene3D G3DSA:3.20.20.70 2 358 4.1E-145 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 5.0E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 PIRSF PIRSF001359 13 358 1.2E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 2.4E-174 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.3E-110 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 SUPERFAMILY SSF51569 4 356 6.45E-129 T 14-10-2018 VV1_1541 c15815bc77dc1913d9578fbf02019df9 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV2_1000 e2c54df46d3bb90200839a5ca008bb20 337 SMART SM00267 172 337 4.5E-34 T 14-10-2018 IPR000160 GGDEF domain VV2_1000 e2c54df46d3bb90200839a5ca008bb20 337 Gene3D G3DSA:3.30.70.270 172 337 7.8E-46 T 14-10-2018 VV2_1000 e2c54df46d3bb90200839a5ca008bb20 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 336 1.7E-37 T 14-10-2018 IPR000160 GGDEF domain VV2_1000 e2c54df46d3bb90200839a5ca008bb20 337 SUPERFAMILY SSF55073 188 336 1.41E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1000 e2c54df46d3bb90200839a5ca008bb20 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 334 2.5E-34 T 14-10-2018 IPR000160 GGDEF domain VV2_0772 da2d43443c55163a459095f94e2ed39c 313 Gene3D G3DSA:3.40.190.10 90 291 7.3E-51 T 14-10-2018 VV2_0772 da2d43443c55163a459095f94e2ed39c 313 SUPERFAMILY SSF53850 88 293 3.62E-39 T 14-10-2018 VV2_0772 da2d43443c55163a459095f94e2ed39c 313 Pfam PF03466 LysR substrate binding domain 91 295 3.6E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0772 da2d43443c55163a459095f94e2ed39c 313 Gene3D G3DSA:3.40.190.10 168 267 7.3E-51 T 14-10-2018 VV2_0772 da2d43443c55163a459095f94e2ed39c 313 SUPERFAMILY SSF46785 2 84 1.82E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0772 da2d43443c55163a459095f94e2ed39c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0772 da2d43443c55163a459095f94e2ed39c 313 Gene3D G3DSA:1.10.10.10 1 86 6.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0772 da2d43443c55163a459095f94e2ed39c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0772 da2d43443c55163a459095f94e2ed39c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0772 da2d43443c55163a459095f94e2ed39c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0684 7585c0bc5466e40dbedda6a382999fac 193 Pfam PF06821 Serine hydrolase 9 183 1.7E-50 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 VV2_0684 7585c0bc5466e40dbedda6a382999fac 193 SUPERFAMILY SSF53474 7 179 5.05E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0684 7585c0bc5466e40dbedda6a382999fac 193 Gene3D G3DSA:3.40.50.1820 1 192 3.7E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0110 c535c613318411e8c55a9e1b3a395f1d 285 SUPERFAMILY SSF81345 6 280 1.19E-60 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_0110 c535c613318411e8c55a9e1b3a395f1d 285 Pfam PF01032 FecCD transport family 6 280 2.8E-62 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VV2_0110 c535c613318411e8c55a9e1b3a395f1d 285 Gene3D G3DSA:1.10.3470.10 2 285 7.6E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_1038 cf8b314a18a1325b34c23d6ae49521c9 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 155 2.5E-56 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1038 cf8b314a18a1325b34c23d6ae49521c9 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 160 34.893 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1038 cf8b314a18a1325b34c23d6ae49521c9 175 SUPERFAMILY SSF55068 3 166 2.22E-70 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1038 cf8b314a18a1325b34c23d6ae49521c9 175 Gene3D G3DSA:3.30.1060.10 1 163 4.9E-67 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1038 cf8b314a18a1325b34c23d6ae49521c9 175 Pfam PF01625 Peptide methionine sulfoxide reductase 6 155 9.0E-61 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Gene3D G3DSA:3.30.1330.10 214 419 1.9E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SUPERFAMILY SSF109736 155 220 7.59E-22 T 14-10-2018 VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 5.6E-105 T 14-10-2018 VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SUPERFAMILY SSF55326 221 428 1.15E-65 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Gene3D G3DSA:3.40.50.880 983 1297 5.7E-139 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SUPERFAMILY SSF56042 825 1035 3.29E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SUPERFAMILY SSF56042 432 615 7.03E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Gene3D G3DSA:1.10.8.750 153 213 6.7E-28 T 14-10-2018 VV1_0340 8695932cbe54562391b7f664d3350e14 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SUPERFAMILY SSF55326 619 816 6.54E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SUPERFAMILY SSF52317 1037 1295 9.35E-98 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SUPERFAMILY SSF82697 1 151 4.29E-51 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 2.8E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 966 4.2E-13 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Gene3D G3DSA:3.90.650.10 420 606 3.5E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 SMART SM01211 1041 1296 2.9E-156 T 14-10-2018 VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Gene3D G3DSA:3.30.1330.10 614 808 1.6E-25 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Gene3D G3DSA:3.90.650.10 809 982 2.8E-30 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_0340 8695932cbe54562391b7f664d3350e14 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.359 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_0154 996d92290ac70d28475142cd243eaab0 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.466 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_0154 996d92290ac70d28475142cd243eaab0 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VV1_0154 996d92290ac70d28475142cd243eaab0 290 Pfam PF00549 CoA-ligase 151 270 1.8E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV1_0154 996d92290ac70d28475142cd243eaab0 290 Pfam PF02629 CoA binding domain 6 99 1.5E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VV1_0154 996d92290ac70d28475142cd243eaab0 290 PIRSF PIRSF001553 1 289 5.9E-135 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_0154 996d92290ac70d28475142cd243eaab0 290 Gene3D G3DSA:3.40.50.720 2 123 4.5E-52 T 14-10-2018 VV1_0154 996d92290ac70d28475142cd243eaab0 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VV1_0154 996d92290ac70d28475142cd243eaab0 290 SUPERFAMILY SSF51735 1 122 2.89E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0154 996d92290ac70d28475142cd243eaab0 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 9.8E-147 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_0154 996d92290ac70d28475142cd243eaab0 290 SUPERFAMILY SSF52210 123 286 2.22E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV1_0154 996d92290ac70d28475142cd243eaab0 290 Gene3D G3DSA:3.40.50.261 124 288 1.8E-76 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VV1_0154 996d92290ac70d28475142cd243eaab0 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 14-10-2018 VV1_0154 996d92290ac70d28475142cd243eaab0 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 14-10-2018 VV1_0154 996d92290ac70d28475142cd243eaab0 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 14-10-2018 VV1_0154 996d92290ac70d28475142cd243eaab0 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 14-10-2018 VV1_0154 996d92290ac70d28475142cd243eaab0 290 SMART SM00881 4 100 3.3E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 1.4E-36 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 769 249.191 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 SUPERFAMILY SSF46548 336 446 6.67E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 Gene3D G3DSA:3.40.50.11540 145 291 4.8E-13 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 Pfam PF12838 4Fe-4S dicluster domain 378 430 2.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 Pfam PF10531 SLBB domain 296 345 4.3E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 4.9E-190 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 Gene3D G3DSA:1.10.1060.10 364 445 5.9E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 SUPERFAMILY SSF142019 96 302 2.09E-59 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_3095 8af28dedb44b0f0c94bbec903705a4f1 919 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 3.6E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_0568 a8a1a69f32e09b3c8e52405f7d2ff9f5 133 SUPERFAMILY SSF55811 2 129 2.84E-36 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_0568 a8a1a69f32e09b3c8e52405f7d2ff9f5 133 Gene3D G3DSA:3.90.79.10 1 133 7.0E-43 T 14-10-2018 VV1_0568 a8a1a69f32e09b3c8e52405f7d2ff9f5 133 PRINTS PR00502 NUDIX hydrolase family signature 49 64 1.0E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_0568 a8a1a69f32e09b3c8e52405f7d2ff9f5 133 PRINTS PR00502 NUDIX hydrolase family signature 35 49 1.0E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_0568 a8a1a69f32e09b3c8e52405f7d2ff9f5 133 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV1_0568 a8a1a69f32e09b3c8e52405f7d2ff9f5 133 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 128 1.3E-43 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VV1_0568 a8a1a69f32e09b3c8e52405f7d2ff9f5 133 Pfam PF00293 NUDIX domain 8 127 3.9E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 Gene3D G3DSA:1.10.1060.10 107 244 3.7E-50 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 SUPERFAMILY SSF54292 5 106 1.84E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 2.6E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 Gene3D G3DSA:3.10.20.30 4 106 7.1E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 8.3E-94 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 SUPERFAMILY SSF46548 107 226 1.74E-30 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_1268 671377a1716a3ac35bbcc1ae70cf207c 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.4E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_1466 38e0375c7bb207406dbb260fb2ee1866 312 SUPERFAMILY SSF103481 46 144 1.7E-13 T 14-10-2018 VV2_1466 38e0375c7bb207406dbb260fb2ee1866 312 SUPERFAMILY SSF103481 187 297 7.85E-8 T 14-10-2018 VV2_1466 38e0375c7bb207406dbb260fb2ee1866 312 Pfam PF00892 EamA-like transporter family 161 295 8.1E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1466 38e0375c7bb207406dbb260fb2ee1866 312 Pfam PF00892 EamA-like transporter family 12 141 8.7E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0207 0f9e71044e897bc88c74bc9df86eaa79 311 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 305 22.228 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VV1_0207 0f9e71044e897bc88c74bc9df86eaa79 311 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 175 302 1.9E-46 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VV1_0207 0f9e71044e897bc88c74bc9df86eaa79 311 Gene3D G3DSA:3.30.1400.10 173 311 2.7E-49 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VV1_0207 0f9e71044e897bc88c74bc9df86eaa79 311 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 176 311 1.0E-77 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VV1_0207 0f9e71044e897bc88c74bc9df86eaa79 311 SUPERFAMILY SSF64383 175 307 3.27E-48 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VV1_0207 0f9e71044e897bc88c74bc9df86eaa79 311 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 303 3.8E-86 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VV1_0207 0f9e71044e897bc88c74bc9df86eaa79 311 SMART SM00771 173 303 6.6E-70 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 867 2.0E-109 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Pfam PF01433 Peptidase family M1 domain 208 435 9.8E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Gene3D G3DSA:2.60.40.1730 15 193 2.4E-70 T 14-10-2018 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Gene3D G3DSA:2.60.40.1840 443 544 7.6E-36 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Gene3D G3DSA:1.10.1740.60 194 278 4.7E-39 T 14-10-2018 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 1.3E-33 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Gene3D G3DSA:1.25.50.10 545 867 2.0E-111 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.5E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 SUPERFAMILY SSF55486 203 449 9.08E-74 T 14-10-2018 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 Gene3D G3DSA:1.10.390.10 279 442 4.7E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VV1_2641 d4185eecafe87701cde3bb7a0bf970bd 869 SUPERFAMILY SSF63737 2 192 1.96E-47 T 14-10-2018 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 Gene3D G3DSA:3.50.50.60 149 251 5.8E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0556 50cf2093c541f97913f8d61031e580dc 472 SUPERFAMILY SSF51971 147 401 8.83E-70 T 14-10-2018 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 SUPERFAMILY SSF46548 8 159 1.41E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 8 471 6.0E-253 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 Gene3D G3DSA:1.10.1060.10 12 148 3.1E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 Gene3D G3DSA:3.50.50.60 252 400 1.3E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0556 50cf2093c541f97913f8d61031e580dc 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 27 136 7.0E-39 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 PRINTS PR00419 Adrenodoxin reductase family signature 173 186 1.1E-36 T 14-10-2018 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.1E-36 T 14-10-2018 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.1E-36 T 14-10-2018 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 PRINTS PR00419 Adrenodoxin reductase family signature 215 225 1.1E-36 T 14-10-2018 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 PRINTS PR00419 Adrenodoxin reductase family signature 150 172 1.1E-36 T 14-10-2018 VV1_0556 50cf2093c541f97913f8d61031e580dc 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 459 6.6E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 Gene3D G3DSA:3.30.390.120 314 376 1.2E-7 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 277 8.7E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 1.9E-14 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.9E-14 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 1.9E-14 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 1.9E-14 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 Gene3D G3DSA:3.50.50.60 6 278 5.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 SUPERFAMILY SSF51905 5 304 1.3E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 378 56.446 T 14-10-2018 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 Gene3D G3DSA:3.50.50.60 108 242 5.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.7E-21 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.7E-21 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.7E-21 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.7E-21 T 14-10-2018 VV2_1344 72f1aa4b189324b4b121ab89f08c9fdd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 2.7E-21 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Pfam PF00122 E1-E2 ATPase 395 575 4.1E-50 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 SUPERFAMILY SSF55008 1 62 4.71E-7 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 825 850 3.9E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 794 810 3.9E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 817 829 2.8E-27 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 610 2.8E-27 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 794 813 2.8E-27 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 730 2.8E-27 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 751 2.8E-27 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 444 458 2.8E-27 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 SUPERFAMILY SSF55008 66 125 1.31E-7 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 SUPERFAMILY SSF81653 397 494 6.15E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 308 904 1.7E-185 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Gene3D G3DSA:3.40.1110.10 607 726 6.1E-91 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Gene3D G3DSA:3.40.50.1000 577 846 6.1E-91 T 14-10-2018 IPR023214 HAD superfamily VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 SUPERFAMILY SSF55008 171 237 3.8E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 366 871 2.0E-89 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 SUPERFAMILY SSF81665 343 590 2.75E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 36 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 ProSitePatterns PS01047 Heavy-metal-associated domain. 175 204 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 598 604 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 ProSitePatterns PS01229 Hypothetical cof family signature 2. 794 816 - T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 SUPERFAMILY SSF56784 594 900 4.13E-59 T 14-10-2018 IPR036412 HAD-like superfamily VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Gene3D G3DSA:3.30.70.100 67 125 3.0E-5 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 327 903 4.7E-182 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Pfam PF00403 Heavy-metal-associated domain 175 234 1.7E-12 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Pfam PF00403 Heavy-metal-associated domain 5 61 5.6E-6 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Gene3D G3DSA:3.30.70.100 4 63 2.6E-6 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Gene3D G3DSA:3.30.70.100 171 238 7.4E-18 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Gene3D G3DSA:2.70.150.20 382 498 7.3E-38 T 14-10-2018 VV1_0239 a5d7f6e08c53899b4d88939f42d363c4 912 Pfam PF00702 haloacid dehalogenase-like hydrolase 592 808 8.9E-44 T 14-10-2018 VV1_0838 cad4f9738120085cb9f3c740bf2a2567 289 SMART SM00382 35 244 2.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0838 cad4f9738120085cb9f3c740bf2a2567 289 SUPERFAMILY SSF52540 6 257 2.55E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0838 cad4f9738120085cb9f3c740bf2a2567 289 Gene3D G3DSA:3.40.50.300 4 288 3.2E-91 T 14-10-2018 VV1_0838 cad4f9738120085cb9f3c740bf2a2567 289 Pfam PF00005 ABC transporter 26 186 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0838 cad4f9738120085cb9f3c740bf2a2567 289 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_3165 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Pfam PF01553 Acyltransferase 442 567 3.1E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_3165 67f5ed7bdabecdb3678a9d07b48ab2ab 624 SUPERFAMILY SSF69593 402 570 7.19E-30 T 14-10-2018 VV1_3165 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Gene3D G3DSA:1.20.1250.20 10 422 2.3E-25 T 14-10-2018 VV1_3165 67f5ed7bdabecdb3678a9d07b48ab2ab 624 Pfam PF07690 Major Facilitator Superfamily 19 381 3.8E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_3165 67f5ed7bdabecdb3678a9d07b48ab2ab 624 SMART SM00563 456 570 1.5E-35 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_3165 67f5ed7bdabecdb3678a9d07b48ab2ab 624 SUPERFAMILY SSF103473 13 423 9.68E-26 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_0393 f9f75f828c1fb7c57f3596a908a635a3 180 Pfam PF06114 IrrE N-terminal-like domain 46 171 1.9E-28 T 14-10-2018 IPR010359 IrrE N-terminal-like domain VV1_0393 f9f75f828c1fb7c57f3596a908a635a3 180 Gene3D G3DSA:3.40.390.50 23 135 9.5E-10 T 14-10-2018 VV1_1035 2cee0fd4ad46da12aca156f3511320ec 293 SMART SM00563 85 227 7.5E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_1035 2cee0fd4ad46da12aca156f3511320ec 293 Pfam PF01553 Acyltransferase 73 226 1.0E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_1035 2cee0fd4ad46da12aca156f3511320ec 293 SUPERFAMILY SSF69593 15 289 1.31E-27 T 14-10-2018 VV1_2259 b36c1f8390624246fdb1ce537d3d157f 571 Pfam PF00563 EAL domain 358 567 2.6E-40 T 14-10-2018 IPR001633 EAL domain VV1_2259 b36c1f8390624246fdb1ce537d3d157f 571 SUPERFAMILY SSF141868 353 567 1.29E-46 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2259 b36c1f8390624246fdb1ce537d3d157f 571 Gene3D G3DSA:3.20.20.450 351 570 1.5E-46 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2259 b36c1f8390624246fdb1ce537d3d157f 571 SMART SM00052 343 571 4.4E-14 T 14-10-2018 IPR001633 EAL domain VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 SUPERFAMILY SSF55186 551 709 2.35E-52 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 SUPERFAMILY SSF101353 255 462 5.36E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 199.45 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 3.1E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Gene3D G3DSA:3.10.310.40 749 857 1.2E-32 T 14-10-2018 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Pfam PF02272 DHHA1 domain 722 856 8.5E-30 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Gene3D G3DSA:3.30.930.10 2 251 6.4E-120 T 14-10-2018 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.1E-227 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Gene3D G3DSA:3.30.54.20 623 676 2.0E-51 T 14-10-2018 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 SUPERFAMILY SSF55681 3 254 2.73E-108 T 14-10-2018 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.0E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Gene3D G3DSA:2.40.30.130 462 551 9.2E-11 T 14-10-2018 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 SUPERFAMILY SSF50447 454 551 1.09E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 SMART SM00863 652 695 1.1E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VV1_1593 795de94d3b65fbee15ab08a18ba9e4d6 860 Gene3D G3DSA:3.30.980.10 562 696 2.0E-51 T 14-10-2018 VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.7E-222 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 4.1E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 8.7E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 Gene3D G3DSA:1.10.8.60 335 440 5.6E-40 T 14-10-2018 VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 SMART SM00382 49 332 7.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 SUPERFAMILY SSF52540 3 441 1.68E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 SMART SM01086 335 429 3.3E-19 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 1.5E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_1355 709dd45c367dd9b1524f4ccba535f0c0 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.088 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VV1_1044 03e2016c0ded12216d25065602abf0b8 481 PIRSF PIRSF006247 1 481 9.6E-166 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VV1_1044 03e2016c0ded12216d25065602abf0b8 481 Pfam PF02386 Cation transport protein 60 475 4.5E-51 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VV1_1044 03e2016c0ded12216d25065602abf0b8 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.2E-115 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 SUPERFAMILY SSF51735 143 320 4.34E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 Gene3D G3DSA:3.40.50.720 143 324 1.6E-156 T 14-10-2018 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 1.3E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 SUPERFAMILY SSF52283 1 174 1.02E-52 T 14-10-2018 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 1.4E-36 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 SMART SM01003 4 143 6.0E-69 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 Gene3D G3DSA:3.40.50.720 3 371 1.6E-156 T 14-10-2018 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 5.0E-73 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 4.7E-271 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 PIRSF PIRSF000203 1 516 1.9E-268 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VV2_0317 1e460a7d38485af2eeedd36b6bc6ed64 518 SMART SM01002 152 317 1.6E-79 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 Pfam PF00158 Sigma-54 interaction domain 188 354 1.8E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 SMART SM00382 208 351 6.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 Gene3D G3DSA:1.10.10.60 456 510 1.8E-10 T 14-10-2018 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 SUPERFAMILY SSF52540 187 424 8.05E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 510 62.584 T 14-10-2018 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 Gene3D G3DSA:1.10.8.60 359 424 6.6E-20 T 14-10-2018 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 SUPERFAMILY SSF46689 461 509 2.11E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 SMART SM00065 20 168 1.4E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 Pfam PF01590 GAF domain 22 154 1.3E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 Gene3D G3DSA:3.40.50.300 175 358 2.0E-62 T 14-10-2018 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 SUPERFAMILY SSF55781 7 167 8.51E-18 T 14-10-2018 VV2_1342 52f053876c9dc5363fcb32d726cb5821 510 Gene3D G3DSA:3.30.450.40 4 172 6.2E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_0122 a8cd0f477cff6a4321418c6627aab758 690 Gene3D G3DSA:3.40.50.300 507 684 1.2E-26 T 14-10-2018 VV2_0122 a8cd0f477cff6a4321418c6627aab758 690 Pfam PF00580 UvrD/REP helicase N-terminal domain 200 498 1.3E-37 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VV2_0122 a8cd0f477cff6a4321418c6627aab758 690 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 6.5E-52 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain VV2_0122 a8cd0f477cff6a4321418c6627aab758 690 Gene3D G3DSA:3.40.50.300 361 506 4.3E-18 T 14-10-2018 VV2_0122 a8cd0f477cff6a4321418c6627aab758 690 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 5.4E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VV2_0122 a8cd0f477cff6a4321418c6627aab758 690 Gene3D G3DSA:3.40.50.300 193 336 5.8E-27 T 14-10-2018 VV2_0122 a8cd0f477cff6a4321418c6627aab758 690 SUPERFAMILY SSF52540 198 681 1.59E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 1.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Pfam PF00072 Response regulator receiver domain 715 828 9.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 PIRSF PIRSF036437 1 970 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SUPERFAMILY SSF52172 712 835 6.12E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Gene3D G3DSA:3.40.50.2300 704 837 1.3E-32 T 14-10-2018 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 535 6.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SMART SM00387 582 695 7.1E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 966 0.0 T 14-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Gene3D G3DSA:1.20.120.160 855 970 4.5E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 694 2.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Gene3D G3DSA:1.10.287.130 404 533 5.3E-25 T 14-10-2018 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SUPERFAMILY SSF47384 459 536 1.14E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SUPERFAMILY SSF47226 860 969 3.79E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Pfam PF01627 Hpt domain 883 955 1.2E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SMART SM00388 470 535 8.8E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Gene3D G3DSA:1.20.58.920 47 182 3.0E-45 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Gene3D G3DSA:1.20.58.920 183 323 7.0E-52 T 14-10-2018 IPR038188 TorS, sensor domain superfamily VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SMART SM00073 873 969 1.2E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SMART SM00448 713 828 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 Gene3D G3DSA:3.30.565.10 534 697 4.0E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0125 8f2ab5bdc51e7828c2a3a89a631a6b64 970 SUPERFAMILY SSF55874 524 699 8.77E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0770 4c976dcf431edf3c57a1defd3f582d74 100 Pfam PF01541 GIY-YIG catalytic domain 6 78 4.4E-13 T 14-10-2018 IPR000305 GIY-YIG endonuclease VV1_0770 4c976dcf431edf3c57a1defd3f582d74 100 SUPERFAMILY SSF82771 4 90 1.57E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VV1_0770 4c976dcf431edf3c57a1defd3f582d74 100 Gene3D G3DSA:3.40.1440.10 4 99 7.9E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 SUPERFAMILY SSF52172 4 135 5.69E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 Gene3D G3DSA:3.40.50.12740 5 211 3.0E-67 T 14-10-2018 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 SMART SM00448 5 118 7.9E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 Pfam PF00072 Response regulator receiver domain 7 119 2.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 7.2E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 SMART SM00421 148 205 5.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2241 e39e2688071dde0348c18fea5c4ef5bb 212 SUPERFAMILY SSF46894 139 211 1.29E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 Pfam PF01039 Carboxyl transferase domain 99 240 1.1E-14 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 Gene3D G3DSA:3.90.226.10 25 285 4.2E-83 T 14-10-2018 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 SUPERFAMILY SSF52096 25 282 2.36E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 8.9E-140 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.393 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1993 8fc8e5f9c5c72b071078fb14020ba203 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 200 399 1.2E-17 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 SUPERFAMILY SSF74863 34 147 6.67E-41 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 Pfam PF11412 Disulphide bond corrector protein DsbC 36 146 4.9E-30 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 592 38.397 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 Gene3D G3DSA:3.40.30.10 464 592 4.2E-33 T 14-10-2018 VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 Pfam PF13899 Thioredoxin-like 484 562 1.8E-13 T 14-10-2018 VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 Gene3D G3DSA:2.60.40.1250 29 163 1.4E-40 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 ProSitePatterns PS00194 Thioredoxin family active site. 500 518 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV1_1247 c78b86452694bb926845bcb0a5b25d92 593 SUPERFAMILY SSF52833 475 590 6.59E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0751 3c905d086ab242b0ea3fd0a9aa033bd2 219 Gene3D G3DSA:2.40.10.220 111 215 1.5E-7 T 14-10-2018 VV2_0751 3c905d086ab242b0ea3fd0a9aa033bd2 219 Pfam PF07238 PilZ domain 112 198 1.9E-12 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VV2_0751 3c905d086ab242b0ea3fd0a9aa033bd2 219 Gene3D G3DSA:2.30.110.10 2 110 2.2E-6 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VV2_0751 3c905d086ab242b0ea3fd0a9aa033bd2 219 Pfam PF12945 Flagellar protein YcgR 15 103 2.4E-9 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VV2_0751 3c905d086ab242b0ea3fd0a9aa033bd2 219 SUPERFAMILY SSF141371 114 215 1.37E-20 T 14-10-2018 VV2_0751 3c905d086ab242b0ea3fd0a9aa033bd2 219 SUPERFAMILY SSF141371 2 113 5.89E-24 T 14-10-2018 VV2_1080 cb2694cb385d291bf7a4b462da9463ca 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 491 564 5.4E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_1080 cb2694cb385d291bf7a4b462da9463ca 586 Pfam PF03611 PTS system sugar-specific permease component 15 415 3.8E-123 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VV2_1080 cb2694cb385d291bf7a4b462da9463ca 586 PIRSF PIRSF037343 1 582 6.7E-284 T 14-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted VV2_1080 cb2694cb385d291bf7a4b462da9463ca 586 Gene3D G3DSA:3.40.50.2300 489 579 7.0E-18 T 14-10-2018 VV2_1080 cb2694cb385d291bf7a4b462da9463ca 586 SUPERFAMILY SSF52794 490 580 2.88E-14 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 Gene3D G3DSA:3.60.120.10 7 521 2.5E-185 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 PIRSF PIRSF001373 3 521 2.8E-260 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 25 198 4.7E-13 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 6.1E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 6.1E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 6.1E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 6.1E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 Pfam PF00425 chorismate binding enzyme 246 506 9.8E-84 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 1.9E-227 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_3064 2188692aaa1e01d82b3f0a18e09ea944 521 SUPERFAMILY SSF56322 14 516 5.49E-157 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV2_0020 9f31043f675e9c81bcafbf290f31c35c 481 Gene3D G3DSA:3.90.640.10 366 409 1.3E-12 T 14-10-2018 VV2_0020 9f31043f675e9c81bcafbf290f31c35c 481 SUPERFAMILY SSF53067 32 236 4.21E-26 T 14-10-2018 VV2_0020 9f31043f675e9c81bcafbf290f31c35c 481 Pfam PF00012 Hsp70 protein 160 290 7.9E-12 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV2_0020 9f31043f675e9c81bcafbf290f31c35c 481 Gene3D G3DSA:3.30.420.40 410 464 1.3E-12 T 14-10-2018 VV2_0020 9f31043f675e9c81bcafbf290f31c35c 481 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 244 257 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV2_0020 9f31043f675e9c81bcafbf290f31c35c 481 SUPERFAMILY SSF53067 239 478 2.1E-33 T 14-10-2018 VV1_2890 f0c0e546d2e482658f8ed5b124d640ae 579 Pfam PF02065 Melibiase 170 352 2.2E-16 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VV1_2890 f0c0e546d2e482658f8ed5b124d640ae 579 SUPERFAMILY SSF51445 193 532 2.15E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_2890 f0c0e546d2e482658f8ed5b124d640ae 579 Gene3D G3DSA:3.20.20.70 188 495 6.2E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 4.6E-55 T 14-10-2018 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 261 3.8E-111 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 212 231 6.6E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 6.6E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 173 196 6.6E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 238 257 6.6E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 108 128 6.6E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 88 105 6.6E-60 T 14-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV2_0834 045413f116faa5f808fbdf69dea8b243 262 SUPERFAMILY SSF51735 8 260 1.85E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0834 045413f116faa5f808fbdf69dea8b243 262 Gene3D G3DSA:3.40.50.720 2 261 2.2E-72 T 14-10-2018 VV2_1213 d54e44d999b4885c3a9d734f1999d63e 478 Pfam PF03600 Citrate transporter 46 421 9.5E-53 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VV1_1554 1ce75f08fdda6c370aef818311248dcc 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 8.0E-31 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VV1_1554 1ce75f08fdda6c370aef818311248dcc 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.7E-29 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 VV1_1554 1ce75f08fdda6c370aef818311248dcc 68 Gene3D G3DSA:3.30.1910.10 1 63 1.9E-30 T 14-10-2018 VV1_0367 59a0b242c6a429ef15c568cc6ddfe132 554 Gene3D G3DSA:3.40.50.300 1 234 1.3E-42 T 14-10-2018 VV1_0367 59a0b242c6a429ef15c568cc6ddfe132 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 1.3E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VV1_0367 59a0b242c6a429ef15c568cc6ddfe132 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 5.8E-171 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VV1_0367 59a0b242c6a429ef15c568cc6ddfe132 554 Gene3D G3DSA:3.40.50.300 245 553 3.5E-51 T 14-10-2018 VV1_0367 59a0b242c6a429ef15c568cc6ddfe132 554 PIRSF PIRSF003128 1 554 2.3E-160 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VV1_0367 59a0b242c6a429ef15c568cc6ddfe132 554 SUPERFAMILY SSF52540 1 510 2.9E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0750 200e194ade84358526dfad03b797dbe6 324 SUPERFAMILY SSF103481 39 138 1.03E-10 T 14-10-2018 VV2_0750 200e194ade84358526dfad03b797dbe6 324 SUPERFAMILY SSF103481 214 294 1.2E-10 T 14-10-2018 VV2_0750 200e194ade84358526dfad03b797dbe6 324 Pfam PF00892 EamA-like transporter family 155 294 4.7E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0750 200e194ade84358526dfad03b797dbe6 324 Pfam PF00892 EamA-like transporter family 4 136 1.9E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1162 2b71ef30bf216ed0165bb8c68e33a9a6 214 Pfam PF03975 CheD chemotactic sensory transduction 84 181 5.6E-30 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VV2_1162 2b71ef30bf216ed0165bb8c68e33a9a6 214 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 25 185 29.176 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 VV2_1162 2b71ef30bf216ed0165bb8c68e33a9a6 214 Gene3D G3DSA:3.30.1330.200 29 191 1.9E-48 T 14-10-2018 IPR038592 CheD-like superfamily VV2_1162 2b71ef30bf216ed0165bb8c68e33a9a6 214 SUPERFAMILY SSF64438 30 186 1.28E-48 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 SUPERFAMILY SSF56300 12 324 3.37E-74 T 14-10-2018 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 Pfam PF00149 Calcineurin-like phosphoesterase 17 256 2.5E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 Pfam PF02872 5'-nucleotidase, C-terminal domain 376 543 5.3E-23 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 Gene3D G3DSA:3.90.780.10 374 580 1.5E-33 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 Gene3D G3DSA:3.60.21.10 7 373 1.0E-88 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 PRINTS PR01607 Apyrase family signature 15 33 4.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 PRINTS PR01607 Apyrase family signature 518 537 4.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 PRINTS PR01607 Apyrase family signature 239 262 4.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 PRINTS PR01607 Apyrase family signature 220 237 4.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 PRINTS PR01607 Apyrase family signature 279 299 4.1E-15 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV2_0237 2b9ba2d25272e3f7414a6f80f3969a7e 581 SUPERFAMILY SSF55816 374 571 5.36E-40 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VV1_1586 2d7f84d93094f4888391bee6bf842399 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.793 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VV1_1586 2d7f84d93094f4888391bee6bf842399 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VV1_1586 2d7f84d93094f4888391bee6bf842399 208 SUPERFAMILY SSF53335 13 204 4.56E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1586 2d7f84d93094f4888391bee6bf842399 208 Gene3D G3DSA:3.40.50.150 1 206 1.6E-74 T 14-10-2018 VV1_1586 2d7f84d93094f4888391bee6bf842399 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 203 2.1E-67 T 14-10-2018 VV1_1586 2d7f84d93094f4888391bee6bf842399 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 206 2.1E-76 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VV2_0121 b39cb61fc5e43d708efa20587305b286 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 2.5E-244 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VV2_0121 b39cb61fc5e43d708efa20587305b286 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 7.2E-114 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VV2_0121 b39cb61fc5e43d708efa20587305b286 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 711 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS VV2_0121 b39cb61fc5e43d708efa20587305b286 717 Pfam PF13515 Fusaric acid resistance protein-like 405 524 4.8E-23 T 14-10-2018 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 183 197 1.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 226 244 1.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 376 400 1.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 151 169 1.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 PRINTS PR01009 Flagellar M-ring protein signature 296 314 1.9E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 55 579 1.7E-75 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 Gene3D G3DSA:3.30.300.30 153 248 3.1E-9 T 14-10-2018 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 PIRSF PIRSF004862 29 581 2.8E-172 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 Pfam PF01514 Secretory protein of YscJ/FliF family 64 250 1.1E-54 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF VV1_1935 28a43d9ccff393082f6dd1a8221130a3 581 Pfam PF08345 Flagellar M-ring protein C-terminal 283 453 1.8E-40 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 4.2E-260 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 SUPERFAMILY SSF53697 245 610 3.25E-113 T 14-10-2018 VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 Gene3D G3DSA:3.40.50.10490 249 609 8.2E-145 T 14-10-2018 VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 SUPERFAMILY SSF56235 2 234 8.58E-76 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 Gene3D G3DSA:3.60.20.10 2 241 2.2E-81 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 Pfam PF01380 SIS domain 290 419 9.5E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 Gene3D G3DSA:3.40.50.10490 448 595 8.2E-145 T 14-10-2018 VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 Pfam PF13522 Glutamine amidotransferase domain 55 174 2.6E-22 T 14-10-2018 VV1_0641 2c83a3cd35370a310a4bdaba9f342bab 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.513 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VV1_0709 9265e32889c484ffd4fff6e1b558f403 119 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 9.1E-21 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VV1_0593 8134a991993596a5793af1985fd21b80 158 Pfam PF04386 Stringent starvation protein B 9 158 6.0E-41 T 14-10-2018 IPR007481 Stringent starvation protein B VV1_0593 8134a991993596a5793af1985fd21b80 158 SUPERFAMILY SSF101738 4 120 1.22E-49 T 14-10-2018 IPR036760 SspB-like superfamily VV1_0593 8134a991993596a5793af1985fd21b80 158 Gene3D G3DSA:2.30.30.220 3 141 1.7E-52 T 14-10-2018 IPR036760 SspB-like superfamily VV1_0593 8134a991993596a5793af1985fd21b80 158 PIRSF PIRSF005276 3 158 8.5E-63 T 14-10-2018 IPR007481 Stringent starvation protein B VV2_1329 ed9dd5e077cd51bcf9f788c0f36bc8ec 413 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 47 406 0.0 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1329 ed9dd5e077cd51bcf9f788c0f36bc8ec 413 SUPERFAMILY SSF56935 29 413 4.27E-95 T 14-10-2018 VV2_1329 ed9dd5e077cd51bcf9f788c0f36bc8ec 413 Pfam PF02264 LamB porin 31 413 1.1E-84 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1329 ed9dd5e077cd51bcf9f788c0f36bc8ec 413 Gene3D G3DSA:2.40.170.10 28 413 5.9E-93 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VV1_1529 4eab0581aaebeda26ba67fc75b57a53b 187 Gene3D G3DSA:3.40.1740.10 1 187 5.3E-70 T 14-10-2018 VV1_1529 4eab0581aaebeda26ba67fc75b57a53b 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 5.5E-52 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VV1_1529 4eab0581aaebeda26ba67fc75b57a53b 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.241 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 VV1_1529 4eab0581aaebeda26ba67fc75b57a53b 187 SUPERFAMILY SSF143456 1 187 3.01E-67 T 14-10-2018 VV1_3040 b9af4f51232c954e122af0ea54535971 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.376 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VV1_3040 b9af4f51232c954e122af0ea54535971 235 Pfam PF13489 Methyltransferase domain 52 200 1.0E-24 T 14-10-2018 VV1_3040 b9af4f51232c954e122af0ea54535971 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 3.9E-87 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VV1_3040 b9af4f51232c954e122af0ea54535971 235 SUPERFAMILY SSF53335 15 230 1.08E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_3040 b9af4f51232c954e122af0ea54535971 235 Gene3D G3DSA:3.40.50.150 11 235 2.1E-74 T 14-10-2018 VV2_0115 17dee2a9433dcd825784c74c44c00b53 82 Gene3D G3DSA:1.20.1280.290 27 76 2.5E-6 T 14-10-2018 VV2_0115 17dee2a9433dcd825784c74c44c00b53 82 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 4.0E-34 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 VV2_0115 17dee2a9433dcd825784c74c44c00b53 82 Pfam PF10688 Bacterial inner membrane protein 4 73 3.5E-8 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 Gene3D G3DSA:3.20.20.10 71 355 1.1E-240 T 14-10-2018 IPR029066 PLP-binding barrel VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 Gene3D G3DSA:2.40.37.10 18 576 1.1E-240 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 1.0E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 1.0E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 1.0E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 1.0E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 Gene3D G3DSA:1.20.58.930 372 467 1.1E-240 T 14-10-2018 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PIRSF PIRSF001336 2 640 5.7E-257 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 80 350 1.1E-51 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 SUPERFAMILY SSF51419 70 352 1.54E-64 T 14-10-2018 IPR029066 PLP-binding barrel VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 43.419 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 2.3E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV1_2356 de6d9e19d766d65a414064b5ed3cbb1f 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 11 638 1.3E-270 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 2.2E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 2.2E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 2.2E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 14 228 1.4E-46 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 251 9.7E-97 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 Gene3D G3DSA:1.10.800.10 1 263 1.3E-98 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VV2_0455 f23aff25309da8acc6ebb2a2f0591212 263 SUPERFAMILY SSF56534 3 247 1.83E-96 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VV2_1473 50389d67881d0d1bba643497489be5e3 508 SUPERFAMILY SSF56634 21 502 5.63E-190 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 PIRSF PIRSF038928 15 501 1.2E-186 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 SMART SM01060 25 411 1.5E-241 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 PRINTS PR00067 Catalase signature 122 139 4.4E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 PRINTS PR00067 Catalase signature 336 362 4.4E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 PRINTS PR00067 Catalase signature 101 119 4.4E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 PRINTS PR00067 Catalase signature 141 159 4.4E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 PRINTS PR00067 Catalase signature 38 61 4.4E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 PRINTS PR00067 Catalase signature 304 331 4.4E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 ProSitePatterns PS00438 Catalase proximal active site signature. 61 77 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 Pfam PF00199 Catalase 25 406 7.4E-167 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 Gene3D G3DSA:2.40.180.10 21 508 9.3E-206 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 VV2_1473 50389d67881d0d1bba643497489be5e3 508 Pfam PF06628 Catalase-related immune-responsive 436 494 4.5E-18 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV2_1473 50389d67881d0d1bba643497489be5e3 508 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VV1_1548 b7fe7adf4abd3240c056363650b50897 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 5.4E-53 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VV1_1548 b7fe7adf4abd3240c056363650b50897 199 SUPERFAMILY SSF100950 5 197 1.09E-58 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV1_1548 b7fe7adf4abd3240c056363650b50897 199 PIRSF PIRSF006806 3 192 9.8E-35 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VV1_1548 b7fe7adf4abd3240c056363650b50897 199 Gene3D G3DSA:3.40.50.10420 2 197 2.8E-56 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VV1_1548 b7fe7adf4abd3240c056363650b50897 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 189 5.3E-44 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VV1_0906 95d487cb879f5bf26ec046a6e7d45b34 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 9.4E-23 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VV1_0906 95d487cb879f5bf26ec046a6e7d45b34 78 Pfam PF02416 mttA/Hcf106 family 4 61 9.2E-15 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VV1_0906 95d487cb879f5bf26ec046a6e7d45b34 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 26.024 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VV1_0946 1850e40f98521e0ed6fc270b188ed9ce 223 Pfam PF01810 LysE type translocator 16 212 1.1E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_0946 1850e40f98521e0ed6fc270b188ed9ce 223 PIRSF PIRSF006324 1 214 6.5E-49 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_1995 650f75e4866998ff993a21d47e927606 187 SUPERFAMILY SSF110997 110 183 4.84E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV1_1995 650f75e4866998ff993a21d47e927606 187 Pfam PF05036 Sporulation related domain 111 178 4.5E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VV1_1995 650f75e4866998ff993a21d47e927606 187 Gene3D G3DSA:3.30.70.1070 105 180 2.5E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV1_0503 24061acac679f9e1705c49acab94ba3d 242 Gene3D G3DSA:2.40.50.1020 164 242 1.0E-8 T 14-10-2018 VV1_0503 24061acac679f9e1705c49acab94ba3d 242 SMART SM00448 2 112 2.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0503 24061acac679f9e1705c49acab94ba3d 242 Pfam PF04397 LytTr DNA-binding domain 146 238 5.2E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VV1_0503 24061acac679f9e1705c49acab94ba3d 242 SMART SM00850 145 239 6.2E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VV1_0503 24061acac679f9e1705c49acab94ba3d 242 Pfam PF00072 Response regulator receiver domain 5 112 3.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0503 24061acac679f9e1705c49acab94ba3d 242 Gene3D G3DSA:3.40.50.2300 1 128 2.3E-30 T 14-10-2018 VV1_0503 24061acac679f9e1705c49acab94ba3d 242 SUPERFAMILY SSF52172 1 121 2.56E-30 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3168 08c3dc97d995e5a1a814864f7e3d4dfe 476 Pfam PF00501 AMP-binding enzyme 16 379 1.2E-52 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV1_3168 08c3dc97d995e5a1a814864f7e3d4dfe 476 Gene3D G3DSA:3.30.300.30 375 475 5.2E-15 T 14-10-2018 VV1_3168 08c3dc97d995e5a1a814864f7e3d4dfe 476 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV1_3168 08c3dc97d995e5a1a814864f7e3d4dfe 476 SUPERFAMILY SSF56801 12 471 7.72E-83 T 14-10-2018 VV1_3168 08c3dc97d995e5a1a814864f7e3d4dfe 476 Gene3D G3DSA:3.40.50.12780 6 374 4.4E-65 T 14-10-2018 VV1_3168 08c3dc97d995e5a1a814864f7e3d4dfe 476 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 467 7.2E-129 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 VV1_2340 768389f8c8f438cdb60d4185989df08b 465 SUPERFAMILY SSF53300 118 458 1.6E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV1_2340 768389f8c8f438cdb60d4185989df08b 465 Gene3D G3DSA:3.40.50.410 305 462 9.5E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV1_2340 768389f8c8f438cdb60d4185989df08b 465 Gene3D G3DSA:3.40.50.410 113 217 6.9E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV1_2340 768389f8c8f438cdb60d4185989df08b 465 Pfam PF00092 von Willebrand factor type A domain 129 193 1.1E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A VV1_2340 768389f8c8f438cdb60d4185989df08b 465 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 6 48 1.5E-7 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VV2_1600 5a78421a5a4cf362f75f882eacbd8c2a 174 SUPERFAMILY SSF52374 1 171 8.44E-25 T 14-10-2018 VV2_1600 5a78421a5a4cf362f75f882eacbd8c2a 174 Gene3D G3DSA:3.40.50.620 1 173 1.8E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV2_1600 5a78421a5a4cf362f75f882eacbd8c2a 174 Pfam PF01467 Cytidylyltransferase-like 7 143 1.7E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.426 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.4E-264 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Gene3D G3DSA:3.30.870.10 320 499 1.0E-72 T 14-10-2018 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Gene3D G3DSA:3.30.870.10 500 686 5.6E-73 T 14-10-2018 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.1E-30 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Pfam PF02503 Polyphosphate kinase middle domain 119 319 6.0E-46 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 SUPERFAMILY SSF56024 315 494 6.59E-56 T 14-10-2018 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.1E-146 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 SUPERFAMILY SSF143724 107 313 5.1E-63 T 14-10-2018 VV1_0464 dec97b378901528d9b6254869a0ee340 700 SUPERFAMILY SSF140356 4 105 3.53E-32 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Gene3D G3DSA:3.30.1840.10 110 307 6.0E-75 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 PIRSF PIRSF015589 1 694 2.2E-253 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VV1_0464 dec97b378901528d9b6254869a0ee340 700 Gene3D G3DSA:1.20.58.310 9 109 6.3E-36 T 14-10-2018 VV1_0464 dec97b378901528d9b6254869a0ee340 700 SUPERFAMILY SSF56024 500 683 8.75E-68 T 14-10-2018 VV1_0260 1a7c950598592bfb25324cfde9931838 383 Gene3D G3DSA:3.40.50.300 24 298 2.5E-151 T 14-10-2018 VV1_0260 1a7c950598592bfb25324cfde9931838 383 Pfam PF06071 Protein of unknown function (DUF933) 299 382 1.4E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 VV1_0260 1a7c950598592bfb25324cfde9931838 383 Pfam PF01926 50S ribosome-binding GTPase 25 141 1.2E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0260 1a7c950598592bfb25324cfde9931838 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 90 105 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0260 1a7c950598592bfb25324cfde9931838 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 107 125 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0260 1a7c950598592bfb25324cfde9931838 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 46 64 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0260 1a7c950598592bfb25324cfde9931838 383 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 45 5.2E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0260 1a7c950598592bfb25324cfde9931838 383 SUPERFAMILY SSF81271 299 380 1.37E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VV1_0260 1a7c950598592bfb25324cfde9931838 383 SUPERFAMILY SSF52540 23 321 1.49E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0260 1a7c950598592bfb25324cfde9931838 383 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 21 383 2.5E-168 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VV1_0260 1a7c950598592bfb25324cfde9931838 383 Gene3D G3DSA:3.10.20.30 68 382 2.5E-151 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_0260 1a7c950598592bfb25324cfde9931838 383 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 22 383 45.169 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VV1_0260 1a7c950598592bfb25324cfde9931838 383 Gene3D G3DSA:1.10.150.300 140 220 2.5E-151 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 VV1_0260 1a7c950598592bfb25324cfde9931838 383 PIRSF PIRSF006641 20 383 1.2E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VV1_0689 18544608a2a0f799f6d246984c6319b6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 7.4E-49 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VV1_0689 18544608a2a0f799f6d246984c6319b6 187 PIRSF PIRSF028513 2 185 1.8E-32 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VV1_0689 18544608a2a0f799f6d246984c6319b6 187 Gene3D G3DSA:2.60.450.10 59 186 4.1E-39 T 14-10-2018 VV1_0689 18544608a2a0f799f6d246984c6319b6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.3E-52 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VV1_0689 18544608a2a0f799f6d246984c6319b6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 24.422 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VV1_2083 6a8367e8c19653d65804121feda05b90 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 8.9E-46 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 VV2_1573 0840628295d81bd749db74e94f214e26 446 Gene3D G3DSA:2.40.50.100 302 338 5.7E-14 T 14-10-2018 VV2_1573 0840628295d81bd749db74e94f214e26 446 Pfam PF13533 Biotin-lipoyl like 78 115 2.4E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_1573 0840628295d81bd749db74e94f214e26 446 Pfam PF13437 HlyD family secretion protein 302 413 6.8E-18 T 14-10-2018 VV2_1573 0840628295d81bd749db74e94f214e26 446 Gene3D G3DSA:2.40.30.170 339 422 5.7E-14 T 14-10-2018 VV2_1573 0840628295d81bd749db74e94f214e26 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1573 0840628295d81bd749db74e94f214e26 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1573 0840628295d81bd749db74e94f214e26 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1573 0840628295d81bd749db74e94f214e26 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1573 0840628295d81bd749db74e94f214e26 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1573 0840628295d81bd749db74e94f214e26 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 3.2E-39 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_1573 0840628295d81bd749db74e94f214e26 446 Gene3D G3DSA:1.10.287.470 228 301 5.7E-14 T 14-10-2018 VV2_1573 0840628295d81bd749db74e94f214e26 446 SUPERFAMILY SSF111369 78 140 1.96E-5 T 14-10-2018 VV2_1573 0840628295d81bd749db74e94f214e26 446 Gene3D G3DSA:2.40.50.100 76 181 7.3E-9 T 14-10-2018 VV2_1573 0840628295d81bd749db74e94f214e26 446 Gene3D G3DSA:1.10.287.470 104 177 7.3E-9 T 14-10-2018 VV2_1573 0840628295d81bd749db74e94f214e26 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 34 446 1.6E-94 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VV1_2883 d597c7213a55dd064fd7b082279c40fb 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 8.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2883 d597c7213a55dd064fd7b082279c40fb 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 4.8E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VV1_2883 d597c7213a55dd064fd7b082279c40fb 295 SUPERFAMILY SSF161098 89 276 3.79E-22 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2883 d597c7213a55dd064fd7b082279c40fb 295 Gene3D G3DSA:1.10.3720.10 84 292 6.6E-20 T 14-10-2018 IPR035906 MetI-like superfamily VV1_3124 f38a735fc7f784c34d806d31afa550c3 456 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 428 4.6E-125 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VV1_3124 f38a735fc7f784c34d806d31afa550c3 456 Pfam PF02386 Cation transport protein 50 438 5.5E-56 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VV2_1425 07ab328064a9e1a36f27ee579344e727 632 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 297 457 9.9E-7 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VV2_1425 07ab328064a9e1a36f27ee579344e727 632 Gene3D G3DSA:3.40.640.10 126 468 1.5E-46 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1425 07ab328064a9e1a36f27ee579344e727 632 SUPERFAMILY SSF53383 47 592 3.21E-58 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 SMART SM00342 171 253 1.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 Gene3D G3DSA:2.60.120.10 6 87 2.2E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 Pfam PF12833 Helix-turn-helix domain 177 253 3.0E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 Gene3D G3DSA:1.10.10.60 156 213 1.5E-10 T 14-10-2018 VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 Pfam PF02311 AraC-like ligand binding domain 19 94 3.3E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 Gene3D G3DSA:1.10.10.60 214 259 5.7E-10 T 14-10-2018 VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 SUPERFAMILY SSF51182 29 122 6.05E-7 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_0956 68ab3953f587dc163aa07a55c532fe83 259 SUPERFAMILY SSF46689 207 254 2.15E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 Pfam PF04851 Type III restriction enzyme, res subunit 168 325 7.2E-42 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 SUPERFAMILY SSF52540 137 364 5.41E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 35 122 3.0E-9 T 14-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 Gene3D G3DSA:3.40.50.300 343 570 4.9E-55 T 14-10-2018 VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 Pfam PF08463 EcoEI R protein C-terminal 656 811 3.4E-28 T 14-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 SUPERFAMILY SSF52540 281 527 1.98E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 Gene3D G3DSA:3.40.50.300 148 342 8.1E-73 T 14-10-2018 VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 SMART SM00487 165 360 5.4E-21 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 Gene3D G3DSA:3.90.1570.30 1 145 2.5E-51 T 14-10-2018 VV1_2037 8c3ebcb878f755dfb8b56d138cbb5948 814 Pfam PF00271 Helicase conserved C-terminal domain 411 525 2.3E-6 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0168 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV2_0168 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV2_0168 e66b95e06d17b26a285e7084d984eaf6 440 SUPERFAMILY SSF53098 100 357 2.12E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_1699 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV1_1699 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV1_1699 e66b95e06d17b26a285e7084d984eaf6 440 SUPERFAMILY SSF53098 100 357 2.12E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_1047 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV2_1047 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV2_1047 e66b95e06d17b26a285e7084d984eaf6 440 SUPERFAMILY SSF53098 100 357 2.12E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_0004 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF13006 Insertion element 4 transposase N-terminal 18 109 2.8E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV2_0004 e66b95e06d17b26a285e7084d984eaf6 440 Pfam PF01609 Transposase DDE domain 128 352 3.2E-24 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV2_0004 e66b95e06d17b26a285e7084d984eaf6 440 SUPERFAMILY SSF53098 100 357 2.12E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_0179 a6c7b1784d793bfcda2388fcb60ef478 523 SUPERFAMILY SSF55604 438 510 5.75E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV1_0179 a6c7b1784d793bfcda2388fcb60ef478 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 1.9E-23 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV1_0179 a6c7b1784d793bfcda2388fcb60ef478 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 4.8E-65 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV1_0179 a6c7b1784d793bfcda2388fcb60ef478 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV1_0179 a6c7b1784d793bfcda2388fcb60ef478 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 7.5E-209 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VV1_0179 a6c7b1784d793bfcda2388fcb60ef478 523 Gene3D G3DSA:3.30.1360.60 434 513 8.0E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV1_0179 a6c7b1784d793bfcda2388fcb60ef478 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 3.6E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV1_1386 d5f15a3613b3dd2b6bdb8c79ef792b32 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VV1_1386 d5f15a3613b3dd2b6bdb8c79ef792b32 222 PIRSF PIRSF001461 1 222 1.7E-106 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VV1_1386 d5f15a3613b3dd2b6bdb8c79ef792b32 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VV1_1386 d5f15a3613b3dd2b6bdb8c79ef792b32 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.3E-92 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VV1_1386 d5f15a3613b3dd2b6bdb8c79ef792b32 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 3.7E-100 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VV1_1386 d5f15a3613b3dd2b6bdb8c79ef792b32 222 SUPERFAMILY SSF51366 4 218 3.77E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV1_1386 d5f15a3613b3dd2b6bdb8c79ef792b32 222 Gene3D G3DSA:3.20.20.70 5 222 8.7E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0019 3e6c1cfa97bcd606c81d011df5f7b4f5 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 2.5E-128 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VV2_0019 3e6c1cfa97bcd606c81d011df5f7b4f5 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV2_0019 3e6c1cfa97bcd606c81d011df5f7b4f5 382 SUPERFAMILY SSF56796 5 381 1.11E-137 T 14-10-2018 VV2_0019 3e6c1cfa97bcd606c81d011df5f7b4f5 382 Gene3D G3DSA:3.40.50.1970 2 183 2.5E-58 T 14-10-2018 VV2_0019 3e6c1cfa97bcd606c81d011df5f7b4f5 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VV2_0019 3e6c1cfa97bcd606c81d011df5f7b4f5 382 Gene3D G3DSA:1.20.1090.10 184 382 4.5E-79 T 14-10-2018 VV1_1461 7f1a4578fb783f3296e7bac769c9c04d 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 1.2E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1461 7f1a4578fb783f3296e7bac769c9c04d 250 SUPERFAMILY SSF55120 7 221 2.56E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1461 7f1a4578fb783f3296e7bac769c9c04d 250 Gene3D G3DSA:3.30.2350.10 4 221 4.9E-68 T 14-10-2018 VV1_1461 7f1a4578fb783f3296e7bac769c9c04d 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SUPERFAMILY SSF47384 652 732 7.65E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:3.40.50.2300 950 1092 2.1E-30 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SMART SM00062 271 486 0.0023 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SMART SM00062 36 256 1.2E-7 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SUPERFAMILY SSF55874 720 887 2.62E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:1.10.287.130 656 732 5.4E-19 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:3.30.450.20 529 655 3.9E-7 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 842 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 886 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 828 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 239 1.2E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 730 1.9E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SUPERFAMILY SSF52172 970 1097 4.98E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:3.30.565.10 733 891 2.0E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:3.40.190.10 269 480 5.7E-24 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Pfam PF00072 Response regulator receiver domain 971 1084 1.1E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SUPERFAMILY SSF53850 38 249 4.73E-23 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Pfam PF01627 Hpt domain 1103 1192 1.5E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SMART SM00387 778 889 1.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SMART SM00388 666 731 8.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:3.40.190.10 122 212 3.5E-32 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:3.40.190.10 356 445 5.7E-24 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SMART SM00448 969 1085 2.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:3.40.190.10 28 236 3.5E-32 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SUPERFAMILY SSF47226 1068 1172 2.22E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Gene3D G3DSA:1.20.120.160 1093 1197 1.1E-6 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 274 480 4.3E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 SUPERFAMILY SSF53850 270 486 5.1E-19 T 14-10-2018 VV2_0137 b8260aa112f42ac84ee4ffe48831c38c 1199 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 779 887 4.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 Gene3D G3DSA:1.10.10.10 1 90 4.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 Gene3D G3DSA:3.40.190.10 93 254 9.6E-38 T 14-10-2018 VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 Gene3D G3DSA:3.40.190.10 159 249 9.6E-38 T 14-10-2018 VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 Pfam PF03466 LysR substrate binding domain 89 274 3.7E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 SUPERFAMILY SSF46785 1 87 1.36E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0874 b1b29a69cf9c85afe8f49e282a0725f3 283 SUPERFAMILY SSF53850 88 277 7.96E-20 T 14-10-2018 VV1_2723 74c437b3860fa73ab57f8fe3fbac6496 545 SUPERFAMILY SSF58104 236 544 1.07E-78 T 14-10-2018 VV1_2723 74c437b3860fa73ab57f8fe3fbac6496 545 Pfam PF00672 HAMP domain 215 264 6.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2723 74c437b3860fa73ab57f8fe3fbac6496 545 SMART SM00304 303 370 42.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2723 74c437b3860fa73ab57f8fe3fbac6496 545 SMART SM00304 214 268 1.0E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2723 74c437b3860fa73ab57f8fe3fbac6496 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 510 2.6E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2723 74c437b3860fa73ab57f8fe3fbac6496 545 SMART SM00283 283 544 5.0E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2723 74c437b3860fa73ab57f8fe3fbac6496 545 Gene3D G3DSA:1.10.287.950 213 545 1.1E-77 T 14-10-2018 VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 1.3E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.602 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 SUPERFAMILY SSF51161 252 434 1.22E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 Gene3D G3DSA:2.160.10.10 225 453 9.3E-70 T 14-10-2018 VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 Gene3D G3DSA:3.90.550.10 1 224 5.2E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 7.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 8.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 296 4.9E-5 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 2.6E-204 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VV1_1023 196dd49a49a4ef488a888dbaedb4cc5d 453 SUPERFAMILY SSF53448 1 249 8.76E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV2_1236 f465bee64baea2a76914d712f64df00e 436 Pfam PF13520 Amino acid permease 9 414 6.3E-47 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV2_1236 f465bee64baea2a76914d712f64df00e 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.561 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VV2_1236 f465bee64baea2a76914d712f64df00e 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 5.4E-204 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VV2_1236 f465bee64baea2a76914d712f64df00e 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 1.7E-125 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 VV2_1236 f465bee64baea2a76914d712f64df00e 436 Gene3D G3DSA:1.20.1740.10 1 435 9.5E-62 T 14-10-2018 VV2_1236 f465bee64baea2a76914d712f64df00e 436 PIRSF PIRSF006060 1 432 2.5E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV1_0131 2962952f5d112bd91cd37a52033e2787 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.24 T 14-10-2018 IPR027354 YcgL domain VV1_0131 2962952f5d112bd91cd37a52033e2787 93 SUPERFAMILY SSF160191 1 92 1.27E-37 T 14-10-2018 IPR038068 YcgL-like superfamily VV1_0131 2962952f5d112bd91cd37a52033e2787 93 Gene3D G3DSA:3.10.510.20 1 73 9.7E-30 T 14-10-2018 IPR038068 YcgL-like superfamily VV1_0131 2962952f5d112bd91cd37a52033e2787 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 5.0E-35 T 14-10-2018 IPR027354 YcgL domain VV1_0131 2962952f5d112bd91cd37a52033e2787 93 Pfam PF05166 YcgL domain 3 74 1.8E-31 T 14-10-2018 IPR027354 YcgL domain VV1_2701 cb13325fd69e0753e989d412d28db550 264 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 19 228 1.3E-75 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein VV1_2701 cb13325fd69e0753e989d412d28db550 264 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 73 84 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_2701 cb13325fd69e0753e989d412d28db550 264 SUPERFAMILY SSF54862 72 221 2.67E-27 T 14-10-2018 VV1_2701 cb13325fd69e0753e989d412d28db550 264 Gene3D G3DSA:3.30.70.20 68 144 2.2E-10 T 14-10-2018 VV1_2701 cb13325fd69e0753e989d412d28db550 264 Pfam PF12838 4Fe-4S dicluster domain 158 211 1.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2701 cb13325fd69e0753e989d412d28db550 264 Pfam PF12838 4Fe-4S dicluster domain 72 127 8.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2701 cb13325fd69e0753e989d412d28db550 264 Gene3D G3DSA:3.30.70.20 147 231 5.1E-11 T 14-10-2018 VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 Gene3D G3DSA:1.20.81.30 57 172 6.8E-36 T 14-10-2018 VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.7E-33 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 2.5E-24 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 1.4E-154 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 4.8E-36 T 14-10-2018 IPR003004 GspF/PilC family VV1_0875 572fdc188365ca42648c9b69f02c00f3 405 Gene3D G3DSA:1.20.81.30 257 368 8.6E-25 T 14-10-2018 VV1_1106 781f2a627afc2c50dca9bf99895ba062 279 Gene3D G3DSA:3.40.50.150 1 279 1.6E-115 T 14-10-2018 VV1_1106 781f2a627afc2c50dca9bf99895ba062 279 SUPERFAMILY SSF53335 9 275 5.55E-97 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1106 781f2a627afc2c50dca9bf99895ba062 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_1106 781f2a627afc2c50dca9bf99895ba062 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.4E-118 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VV1_1106 781f2a627afc2c50dca9bf99895ba062 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.38 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VV2_0738 792b4f32f956bdf1ac8ab6f24f1ba43b 554 Gene3D G3DSA:3.40.190.10 125 350 5.8E-31 T 14-10-2018 VV2_0738 792b4f32f956bdf1ac8ab6f24f1ba43b 554 SUPERFAMILY SSF53850 122 548 5.61E-43 T 14-10-2018 VV2_0738 792b4f32f956bdf1ac8ab6f24f1ba43b 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 313 7.9E-16 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV2_0738 792b4f32f956bdf1ac8ab6f24f1ba43b 554 Pfam PF12793 Sugar transport-related sRNA regulator N-term 7 117 3.0E-16 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VV1_1041 9eb0ff0a1c7453d8d25b0c74fee58695 266 Pfam PF07070 SpoOM protein 6 222 3.6E-77 T 14-10-2018 IPR009776 Sporulation stage 0, protein M VV2_0277 0a5768bd18fc16e258be02044ffc258f 295 SUPERFAMILY SSF53850 96 291 7.24E-17 T 14-10-2018 VV2_0277 0a5768bd18fc16e258be02044ffc258f 295 Gene3D G3DSA:3.40.190.290 133 289 4.3E-7 T 14-10-2018 VV2_0277 0a5768bd18fc16e258be02044ffc258f 295 SUPERFAMILY SSF46785 6 86 1.27E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0277 0a5768bd18fc16e258be02044ffc258f 295 Pfam PF03466 LysR substrate binding domain 122 291 2.1E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0277 0a5768bd18fc16e258be02044ffc258f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0277 0a5768bd18fc16e258be02044ffc258f 295 Gene3D G3DSA:1.10.10.10 5 90 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_3048 8a817b2f6fc3ae1b9403650ec18aa93b 377 SUPERFAMILY SSF51419 14 242 4.14E-42 T 14-10-2018 IPR029066 PLP-binding barrel VV1_3048 8a817b2f6fc3ae1b9403650ec18aa93b 377 Gene3D G3DSA:3.20.20.10 15 242 1.4E-142 T 14-10-2018 IPR029066 PLP-binding barrel VV1_3048 8a817b2f6fc3ae1b9403650ec18aa93b 377 Gene3D G3DSA:2.40.37.10 7 372 1.4E-142 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV1_3048 8a817b2f6fc3ae1b9403650ec18aa93b 377 PIRSF PIRSF038941 1 372 8.3E-130 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VV1_3048 8a817b2f6fc3ae1b9403650ec18aa93b 377 SUPERFAMILY SSF50621 212 358 1.12E-22 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV1_3048 8a817b2f6fc3ae1b9403650ec18aa93b 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.1E-164 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VV1_1678 42f741901e281feaa5502231a083e4d9 431 Gene3D G3DSA:3.90.1150.10 6 418 6.2E-179 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_1678 42f741901e281feaa5502231a083e4d9 431 SUPERFAMILY SSF53383 1 423 4.18E-134 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_1678 42f741901e281feaa5502231a083e4d9 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.237 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VV1_1678 42f741901e281feaa5502231a083e4d9 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.5E-193 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VV1_1678 42f741901e281feaa5502231a083e4d9 431 Pfam PF00202 Aminotransferase class-III 33 395 1.2E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_1678 42f741901e281feaa5502231a083e4d9 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_1678 42f741901e281feaa5502231a083e4d9 431 Gene3D G3DSA:3.40.640.10 69 317 6.2E-179 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 Pfam PF00672 HAMP domain 204 249 9.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 498 2.1E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 SUPERFAMILY SSF58104 224 533 2.35E-72 T 14-10-2018 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM00304 257 309 57.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM00304 204 256 3.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 Gene3D G3DSA:3.30.450.20 37 180 1.1E-31 T 14-10-2018 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM01049 36 123 1.9E-21 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 SMART SM00283 271 532 1.7E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 Pfam PF17200 Single Cache domain 2 40 180 7.9E-29 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_1774 b2933908fbcd4c4e74d8c4285405b2ed 533 Gene3D G3DSA:1.10.287.950 204 533 7.8E-73 T 14-10-2018 VV1_0652 a531a77fb18f68d949526017d41fbfe9 185 SMART SM00014 71 180 2.4E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV1_0652 a531a77fb18f68d949526017d41fbfe9 185 Pfam PF01569 PAP2 superfamily 71 182 7.2E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV1_0652 a531a77fb18f68d949526017d41fbfe9 185 Gene3D G3DSA:1.20.144.10 99 185 2.0E-19 T 14-10-2018 VV1_0652 a531a77fb18f68d949526017d41fbfe9 185 SUPERFAMILY SSF48317 17 182 1.83E-37 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VV1_2229 213520d6c02a15a916b3d9f6b4f5dc22 318 SUPERFAMILY SSF51395 1 312 1.12E-71 T 14-10-2018 VV1_2229 213520d6c02a15a916b3d9f6b4f5dc22 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.497 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VV1_2229 213520d6c02a15a916b3d9f6b4f5dc22 318 PIRSF PIRSF006621 1 318 1.6E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_2229 213520d6c02a15a916b3d9f6b4f5dc22 318 Gene3D G3DSA:1.20.225.30 243 314 3.8E-25 T 14-10-2018 VV1_2229 213520d6c02a15a916b3d9f6b4f5dc22 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_2229 213520d6c02a15a916b3d9f6b4f5dc22 318 Gene3D G3DSA:3.20.20.70 1 242 2.2E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2229 213520d6c02a15a916b3d9f6b4f5dc22 318 Pfam PF01207 Dihydrouridine synthase (Dus) 5 300 2.5E-76 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_1218 2e1501f420d07fd9941fa08e7a817f78 355 SUPERFAMILY SSF51726 1 354 1.38E-122 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV1_1218 2e1501f420d07fd9941fa08e7a817f78 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.539 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VV1_1218 2e1501f420d07fd9941fa08e7a817f78 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 6.9E-140 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VV1_1218 2e1501f420d07fd9941fa08e7a817f78 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.9E-141 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VV1_1218 2e1501f420d07fd9941fa08e7a817f78 355 Gene3D G3DSA:3.20.20.210 1 355 3.5E-159 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV1_1218 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VV1_1218 2e1501f420d07fd9941fa08e7a817f78 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VV1_0190 4b5f4b23ca0adc2c2e4609a30c4df044 290 SMART SM00862 29 107 5.1E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0190 4b5f4b23ca0adc2c2e4609a30c4df044 290 Gene3D G3DSA:1.10.10.10 5 107 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0190 4b5f4b23ca0adc2c2e4609a30c4df044 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 1.8E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0190 4b5f4b23ca0adc2c2e4609a30c4df044 290 SUPERFAMILY SSF46894 7 109 2.64E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 1.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 SMART SM00448 4 117 2.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 SUPERFAMILY SSF52172 5 133 4.27E-33 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 SUPERFAMILY SSF46894 130 204 1.02E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 SMART SM00421 145 202 1.1E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 Gene3D G3DSA:3.40.50.12740 4 206 6.9E-65 T 14-10-2018 VV2_0718 1905a1b67abcf4976f1de64941f1a0b4 210 Pfam PF00072 Response regulator receiver domain 6 117 1.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 3.2E-37 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 7.3E-27 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 SMART SM00226 3 145 4.4E-52 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 Gene3D G3DSA:3.40.50.2300 1 146 8.0E-51 T 14-10-2018 VV1_0783 1c4b8d99c86d882ed6b7e7ac310bfd5a 146 SUPERFAMILY SSF52788 1 146 1.05E-41 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 Pfam PF07549 SecD/SecF GG Motif 115 141 3.6E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 Gene3D G3DSA:1.20.1640.10 451 603 7.8E-8 T 14-10-2018 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.4E-37 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 2.6E-151 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 Pfam PF02355 Protein export membrane protein 436 597 5.3E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 Gene3D G3DSA:3.30.70.3400 222 440 1.8E-50 T 14-10-2018 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 1.3E-82 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 Gene3D G3DSA:3.30.1360.200 281 434 1.8E-50 T 14-10-2018 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.212 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 SUPERFAMILY SSF82866 413 609 4.19E-45 T 14-10-2018 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 3.6E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 3.6E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_0443 62945cba300701ad2f9ccc62c2cf7dc0 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 3.6E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2284 7fc81630b065229d1b89458f12c20d10 305 SUPERFAMILY SSF53850 92 301 4.75E-30 T 14-10-2018 VV1_2284 7fc81630b065229d1b89458f12c20d10 305 Gene3D G3DSA:3.40.190.10 92 298 2.8E-33 T 14-10-2018 VV1_2284 7fc81630b065229d1b89458f12c20d10 305 Pfam PF03466 LysR substrate binding domain 98 300 5.0E-14 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_2284 7fc81630b065229d1b89458f12c20d10 305 SUPERFAMILY SSF46785 6 87 2.92E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2284 7fc81630b065229d1b89458f12c20d10 305 Gene3D G3DSA:1.10.10.10 3 89 8.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2284 7fc81630b065229d1b89458f12c20d10 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2284 7fc81630b065229d1b89458f12c20d10 305 Gene3D G3DSA:3.40.190.10 176 274 2.8E-33 T 14-10-2018 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 Gene3D G3DSA:2.130.10.10 105 376 3.9E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1098 1139 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 Gene3D G3DSA:2.130.10.10 393 635 7.6E-18 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 SUPERFAMILY SSF101898 225 450 2.07E-9 T 14-10-2018 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 SUPERFAMILY SSF46689 1097 1144 1.21E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 SMART SM00342 1061 1143 8.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 SUPERFAMILY SSF63829 392 575 3.05E-14 T 14-10-2018 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 SUPERFAMILY SSF50998 62 325 7.46E-5 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 Pfam PF12833 Helix-turn-helix domain 1068 1143 6.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_0150 db8cb4167895c56ea120ae78f1c0be73 1150 Gene3D G3DSA:1.10.10.60 1045 1144 6.6E-23 T 14-10-2018 VV1_0712 33eb552f9136952c6c93ada77091b861 571 Gene3D G3DSA:2.40.160.50 263 571 9.8E-99 T 14-10-2018 VV1_0712 33eb552f9136952c6c93ada77091b861 571 Gene3D G3DSA:3.10.20.310 186 262 6.7E-20 T 14-10-2018 VV1_0712 33eb552f9136952c6c93ada77091b861 571 Gene3D G3DSA:3.10.20.310 98 185 1.5E-30 T 14-10-2018 VV1_0712 33eb552f9136952c6c93ada77091b861 571 Gene3D G3DSA:3.10.20.310 22 97 9.8E-20 T 14-10-2018 VV1_0712 33eb552f9136952c6c93ada77091b861 571 Pfam PF17243 POTRA domain TamA domain 1 26 95 7.9E-18 T 14-10-2018 IPR035243 TamA, POTRA domain 1 VV1_0712 33eb552f9136952c6c93ada77091b861 571 Pfam PF01103 Surface antigen 275 568 2.0E-29 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VV1_0712 33eb552f9136952c6c93ada77091b861 571 Pfam PF07244 Surface antigen variable number repeat 106 178 4.7E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 SUPERFAMILY SSF54862 28 143 4.6E-16 T 14-10-2018 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 Pfam PF04055 Radical SAM superfamily 29 233 5.3E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 SUPERFAMILY SSF102114 83 289 3.57E-8 T 14-10-2018 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 Pfam PF13353 4Fe-4S single cluster domain 21 146 9.2E-8 T 14-10-2018 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 287 2.6E-124 T 14-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 Gene3D G3DSA:3.20.20.70 8 68 2.4E-12 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 Gene3D G3DSA:3.20.20.70 69 280 1.4E-33 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 PIRSF PIRSF000371 1 293 1.4E-82 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VV1_2283 8e36433aae28ed265e14cc6aa5e1ff82 297 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 Gene3D G3DSA:1.10.10.10 10 98 6.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 Gene3D G3DSA:3.40.190.10 101 304 9.6E-69 T 14-10-2018 VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 SUPERFAMILY SSF46785 15 95 5.77E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 7.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 Gene3D G3DSA:3.40.190.10 180 279 9.6E-69 T 14-10-2018 VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 Pfam PF03466 LysR substrate binding domain 107 307 2.2E-22 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0984 acd41a6306b35f3745ff36e1fabe9341 321 SUPERFAMILY SSF53850 100 306 1.81E-39 T 14-10-2018 VV1_2258 f5ace4cee823664a43695ab06241ef76 155 SUPERFAMILY SSF55729 1 140 8.47E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2258 f5ace4cee823664a43695ab06241ef76 155 Gene3D G3DSA:3.40.630.30 2 151 1.7E-15 T 14-10-2018 VV1_2258 f5ace4cee823664a43695ab06241ef76 155 Pfam PF00583 Acetyltransferase (GNAT) family 20 133 3.3E-8 T 14-10-2018 IPR000182 GNAT domain VV2_1200 eafc76d7cf5310fd64462782f1cd12dd 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.7E-139 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VV2_1200 eafc76d7cf5310fd64462782f1cd12dd 266 SUPERFAMILY SSF100950 1 262 1.1E-103 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV2_1200 eafc76d7cf5310fd64462782f1cd12dd 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VV2_1200 eafc76d7cf5310fd64462782f1cd12dd 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 6.4E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VV2_1200 eafc76d7cf5310fd64462782f1cd12dd 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.134 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VV2_1200 eafc76d7cf5310fd64462782f1cd12dd 266 Gene3D G3DSA:3.40.50.1360 1 266 3.6E-120 T 14-10-2018 VV2_0488 9c4c80540d123cba93906929ac9dd950 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV2_0488 9c4c80540d123cba93906929ac9dd950 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.3E-57 T 14-10-2018 VV2_0488 9c4c80540d123cba93906929ac9dd950 252 Gene3D G3DSA:3.40.50.720 1 252 5.7E-72 T 14-10-2018 VV2_0488 9c4c80540d123cba93906929ac9dd950 252 SUPERFAMILY SSF51735 6 250 3.47E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.2E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0014 T 14-10-2018 VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0488 9c4c80540d123cba93906929ac9dd950 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0520 389b2d48e0f5cf720bab8b76b089ec83 172 Gene3D G3DSA:3.90.79.10 1 159 6.1E-51 T 14-10-2018 VV1_0520 389b2d48e0f5cf720bab8b76b089ec83 172 SUPERFAMILY SSF55811 6 152 1.22E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_0520 389b2d48e0f5cf720bab8b76b089ec83 172 Pfam PF00293 NUDIX domain 7 145 3.1E-27 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_0520 389b2d48e0f5cf720bab8b76b089ec83 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.482 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VV1_0520 389b2d48e0f5cf720bab8b76b089ec83 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.5E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_0520 389b2d48e0f5cf720bab8b76b089ec83 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.5E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_0520 389b2d48e0f5cf720bab8b76b089ec83 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV2_0433 036c074e9374ccee20cbffb958ff5dc8 157 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 8 147 1.9E-34 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VV2_0433 036c074e9374ccee20cbffb958ff5dc8 157 Pfam PF04965 Gene 25-like lysozyme 33 133 1.8E-16 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VV2_0433 036c074e9374ccee20cbffb958ff5dc8 157 SUPERFAMILY SSF160719 33 142 6.28E-9 T 14-10-2018 VV2_0710 f55720e1227a3213cfe2e738c89d32bc 202 Gene3D G3DSA:2.10.109.10 86 202 4.5E-30 T 14-10-2018 VV2_0710 f55720e1227a3213cfe2e738c89d32bc 202 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 19 81 1.7E-16 T 14-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 VV2_0710 f55720e1227a3213cfe2e738c89d32bc 202 Gene3D G3DSA:1.10.260.40 15 84 2.3E-18 T 14-10-2018 VV2_0710 f55720e1227a3213cfe2e738c89d32bc 202 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 96 196 4.0E-24 T 14-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 VV1_2940 acc3f8d27323bf4cbc1d02771273b2df 227 Pfam PF13500 AAA domain 4 211 5.1E-40 T 14-10-2018 VV1_2940 acc3f8d27323bf4cbc1d02771273b2df 227 SUPERFAMILY SSF52540 2 213 6.2E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2940 acc3f8d27323bf4cbc1d02771273b2df 227 Gene3D G3DSA:3.40.50.300 2 224 6.6E-71 T 14-10-2018 VV1_2940 acc3f8d27323bf4cbc1d02771273b2df 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 30.083 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VV1_2940 acc3f8d27323bf4cbc1d02771273b2df 227 PIRSF PIRSF006755 1 227 2.6E-79 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VV1_2940 acc3f8d27323bf4cbc1d02771273b2df 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 5.9E-54 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VV1_0862 575b47e53b2aba3cff73724a7aba0e8a 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 3.1E-109 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VV1_0862 575b47e53b2aba3cff73724a7aba0e8a 255 Pfam PF00561 alpha/beta hydrolase fold 16 242 2.7E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0862 575b47e53b2aba3cff73724a7aba0e8a 255 SUPERFAMILY SSF53474 3 252 5.04E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0862 575b47e53b2aba3cff73724a7aba0e8a 255 Gene3D G3DSA:3.40.50.1820 1 253 3.7E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0862 575b47e53b2aba3cff73724a7aba0e8a 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 47.2 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VV2_0003 017e96679f6d047657cedca891b77b2a 154 Pfam PF04224 Protein of unknown function, DUF417 8 146 2.4E-42 T 14-10-2018 IPR007339 Inner membrane protein RclC-like VV2_0003 017e96679f6d047657cedca891b77b2a 154 PIRSF PIRSF028065 1 149 1.4E-81 T 14-10-2018 IPR016865 Inner membrane protein RclC VV1_1002 97b18b5af67d9cb1cc955465a343877b 223 SUPERFAMILY SSF161098 13 203 1.7E-43 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1002 97b18b5af67d9cb1cc955465a343877b 223 Gene3D G3DSA:1.10.3720.10 1 222 2.6E-53 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1002 97b18b5af67d9cb1cc955465a343877b 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.1E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV1_1002 97b18b5af67d9cb1cc955465a343877b 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 7.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 SMART SM00388 205 272 1.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 5.1E-31 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 Gene3D G3DSA:3.30.450.20 85 200 1.3E-9 T 14-10-2018 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 8.5E-138 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 SMART SM00387 317 429 2.6E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0467 9a376db8811c9f3597581096baabf0c1 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 6.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0467 9a376db8811c9f3597581096baabf0c1 432 SUPERFAMILY SSF55785 86 197 1.08E-11 T 14-10-2018 IPR035965 PAS domain superfamily VV1_0467 9a376db8811c9f3597581096baabf0c1 432 SUPERFAMILY SSF55874 261 427 3.27E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0467 9a376db8811c9f3597581096baabf0c1 432 SUPERFAMILY SSF47384 192 272 1.31E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 Pfam PF00989 PAS fold 99 187 2.0E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 5.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 SMART SM00091 98 164 1.7E-5 T 14-10-2018 IPR000014 PAS domain VV1_0467 9a376db8811c9f3597581096baabf0c1 432 Gene3D G3DSA:3.30.565.10 282 430 2.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0467 9a376db8811c9f3597581096baabf0c1 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 1.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0467 9a376db8811c9f3597581096baabf0c1 432 Gene3D G3DSA:1.10.287.130 201 275 1.2E-20 T 14-10-2018 VV1_2290 f7e618fc31f69764971de296f58bde99 248 Gene3D G3DSA:3.40.190.10 109 206 1.3E-15 T 14-10-2018 VV1_2290 f7e618fc31f69764971de296f58bde99 248 SUPERFAMILY SSF53850 29 243 5.87E-28 T 14-10-2018 VV1_2290 f7e618fc31f69764971de296f58bde99 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 242 2.5E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2290 f7e618fc31f69764971de296f58bde99 248 Gene3D G3DSA:3.40.190.10 45 240 1.3E-15 T 14-10-2018 VV2_0446 b5f7e4f56c6ff00f9fbb387318e2c798 722 Pfam PF00069 Protein kinase domain 100 318 8.2E-38 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV2_0446 b5f7e4f56c6ff00f9fbb387318e2c798 722 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 227 239 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VV2_0446 b5f7e4f56c6ff00f9fbb387318e2c798 722 Gene3D G3DSA:1.10.510.10 189 378 3.5E-31 T 14-10-2018 VV2_0446 b5f7e4f56c6ff00f9fbb387318e2c798 722 SMART SM00220 100 382 3.5E-36 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV2_0446 b5f7e4f56c6ff00f9fbb387318e2c798 722 Gene3D G3DSA:3.30.200.20 39 188 2.4E-25 T 14-10-2018 VV2_0446 b5f7e4f56c6ff00f9fbb387318e2c798 722 SUPERFAMILY SSF56112 94 344 4.05E-53 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV1_0001 64787929b621371b9a87fbd8484f87b3 333 Gene3D G3DSA:3.40.710.10 31 331 4.8E-76 T 14-10-2018 VV1_0001 64787929b621371b9a87fbd8484f87b3 333 Pfam PF13354 Beta-lactamase enzyme family 60 303 1.7E-47 T 14-10-2018 VV1_0001 64787929b621371b9a87fbd8484f87b3 333 PRINTS PR00118 Beta-lactamase class A signature 39 63 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV1_0001 64787929b621371b9a87fbd8484f87b3 333 PRINTS PR00118 Beta-lactamase class A signature 151 175 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV1_0001 64787929b621371b9a87fbd8484f87b3 333 PRINTS PR00118 Beta-lactamase class A signature 115 140 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV1_0001 64787929b621371b9a87fbd8484f87b3 333 PRINTS PR00118 Beta-lactamase class A signature 70 87 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV1_0001 64787929b621371b9a87fbd8484f87b3 333 SUPERFAMILY SSF56601 36 329 2.65E-61 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 51.238 T 14-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 PRINTS PR00762 Chloride channel signature 181 200 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 PRINTS PR00762 Chloride channel signature 385 401 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 PRINTS PR00762 Chloride channel signature 403 422 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 PRINTS PR00762 Chloride channel signature 350 370 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 PRINTS PR00762 Chloride channel signature 100 117 3.2E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 Gene3D G3DSA:1.10.3080.10 29 467 5.9E-143 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 SUPERFAMILY SSF81340 26 451 2.62E-114 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VV2_0540 026a7e5b9e65215fe247af6c776e585d 467 Pfam PF00654 Voltage gated chloride channel 88 435 8.0E-95 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 Gene3D G3DSA:3.40.50.300 132 313 3.2E-62 T 14-10-2018 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 Gene3D G3DSA:3.40.50.2300 1 131 1.4E-29 T 14-10-2018 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 SUPERFAMILY SSF52172 3 186 3.98E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 Pfam PF02954 Bacterial regulatory protein, Fis family 451 487 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 Gene3D G3DSA:1.10.8.60 314 394 1.3E-27 T 14-10-2018 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 Gene3D G3DSA:1.10.10.60 445 488 1.3E-7 T 14-10-2018 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 SUPERFAMILY SSF52540 142 385 2.55E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 SUPERFAMILY SSF46689 439 492 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 SMART SM00448 3 114 2.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 Pfam PF00158 Sigma-54 interaction domain 143 309 1.1E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 SMART SM00382 162 304 1.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_2664 d5a07defd2037a401f21c42212f2c0d5 497 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1227 a60acbb99b6de52be9e15695cb857e1e 423 Pfam PF02264 LamB porin 68 423 4.1E-38 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1227 a60acbb99b6de52be9e15695cb857e1e 423 SUPERFAMILY SSF56935 32 423 8.37E-84 T 14-10-2018 VV2_1227 a60acbb99b6de52be9e15695cb857e1e 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 94 417 4.0E-151 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1227 a60acbb99b6de52be9e15695cb857e1e 423 Gene3D G3DSA:2.40.170.10 31 423 1.8E-36 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VV2_0577 fb10f1b02d2c9aa94b1eda7298adb7cd 140 Gene3D G3DSA:2.20.25.10 1 43 1.5E-22 T 14-10-2018 VV2_0577 fb10f1b02d2c9aa94b1eda7298adb7cd 140 Pfam PF02566 OsmC-like protein 38 133 5.8E-18 T 14-10-2018 IPR003718 OsmC/Ohr family VV2_0577 fb10f1b02d2c9aa94b1eda7298adb7cd 140 Gene3D G3DSA:3.30.300.20 44 140 7.5E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV2_0577 fb10f1b02d2c9aa94b1eda7298adb7cd 140 SUPERFAMILY SSF82784 1 135 9.42E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VV2_0577 fb10f1b02d2c9aa94b1eda7298adb7cd 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 4.9E-52 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 505 1.0E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 Gene3D G3DSA:1.10.287.950 209 540 9.5E-77 T 14-10-2018 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 SMART SM00304 209 263 8.5E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 SUPERFAMILY SSF58104 231 540 4.58E-81 T 14-10-2018 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 SMART SM00283 278 539 4.5E-84 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 Pfam PF00672 HAMP domain 209 259 6.7E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 185 205 9.9E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 9.9E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 9.9E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1262 bf93262db6567b3927d54f7875bb402f 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 9.9E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 6.3E-61 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF47917 352 466 1.73E-50 T 14-10-2018 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:1.10.1140.10 352 467 5.6E-54 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 8.1E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF50615 1 75 1.91E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 SMART SM00382 142 334 5.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:3.40.50.300 76 351 1.8E-111 T 14-10-2018 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.205 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.3E-249 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 SUPERFAMILY SSF52540 77 355 8.49E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1021 006d3fe3b073c67f6a283fc12f5fc6e8 467 Gene3D G3DSA:2.40.10.170 2 75 4.2E-30 T 14-10-2018 VV1_1578 b4162f12567cd6edc544d67fe053e061 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 8.7E-64 T 14-10-2018 IPR017926 Glutamine amidotransferase VV1_1578 b4162f12567cd6edc544d67fe053e061 545 Gene3D G3DSA:3.40.50.300 1 285 1.7E-133 T 14-10-2018 VV1_1578 b4162f12567cd6edc544d67fe053e061 545 Gene3D G3DSA:3.40.50.880 286 543 4.6E-106 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_1578 b4162f12567cd6edc544d67fe053e061 545 Pfam PF06418 CTP synthase N-terminus 5 265 7.1E-125 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VV1_1578 b4162f12567cd6edc544d67fe053e061 545 SUPERFAMILY SSF52540 3 269 1.9E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1578 b4162f12567cd6edc544d67fe053e061 545 SUPERFAMILY SSF52317 289 538 6.66E-89 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_1578 b4162f12567cd6edc544d67fe053e061 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.404 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VV1_1578 b4162f12567cd6edc544d67fe053e061 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.2E-262 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 SUPERFAMILY SSF48334 267 564 1.96E-89 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 SMART SM00533 283 590 9.0E-105 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 SUPERFAMILY SSF55271 5 113 2.09E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Gene3D G3DSA:3.30.420.110 127 261 9.2E-35 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Gene3D G3DSA:3.40.1170.10 1 121 1.7E-52 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 SUPERFAMILY SSF53150 114 266 1.31E-40 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Gene3D G3DSA:1.10.1420.10 386 502 2.0E-105 T 14-10-2018 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.232 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 SMART SM00534 606 793 7.8E-119 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Gene3D G3DSA:1.10.1420.10 266 558 2.0E-105 T 14-10-2018 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Pfam PF00488 MutS domain V 609 796 5.9E-87 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Gene3D G3DSA:3.40.50.300 567 851 1.3E-100 T 14-10-2018 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Pfam PF05192 MutS domain III 269 558 3.4E-40 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Pfam PF05188 MutS domain II 128 253 5.8E-31 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Pfam PF05190 MutS family domain IV 427 517 7.9E-29 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 SUPERFAMILY SSF52540 566 796 3.85E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 Pfam PF01624 MutS domain I 8 119 1.7E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 PIRSF PIRSF037677 190 833 1.2E-130 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VV1_1589 36793e7bf29371a9f0254b5600d1a648 853 PIRSF PIRSF037677 2 181 2.4E-27 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 55 150 3.31E-23 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 5.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.70.1440 672 873 1.5E-256 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.2090.10 194 286 1.5E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82714 729 804 1.7E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.70.1430 573 671 1.5E-256 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.70.1320 151 343 1.5E-256 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:1.20.1640.10 25 521 1.5E-256 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:1.20.1640.10 522 1025 1.5E-256 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82866 810 1032 4.05E-47 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82714 199 282 8.37E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82866 307 506 5.49E-34 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.2090.10 723 813 1.5E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Pfam PF00873 AcrB/AcrD/AcrF family 19 1029 2.1E-171 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 SUPERFAMILY SSF82693 151 338 2.33E-18 T 14-10-2018 VV1_2874 a1785d6fe0b3eefb70ea22d265b49792 1035 Gene3D G3DSA:3.30.70.1430 55 821 1.5E-256 T 14-10-2018 VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 SMART SM00116 275 322 5.0 T 14-10-2018 IPR000644 CBS domain VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 SMART SM00116 210 258 0.0077 T 14-10-2018 IPR000644 CBS domain VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 PIRSF PIRSF004692 1 323 2.6E-130 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 Pfam PF00571 CBS domain 268 320 2.1E-5 T 14-10-2018 IPR000644 CBS domain VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 Pfam PF00571 CBS domain 203 258 1.3E-4 T 14-10-2018 IPR000644 CBS domain VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 Pfam PF01380 SIS domain 41 172 9.5E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 Gene3D G3DSA:3.40.50.10490 6 195 3.2E-66 T 14-10-2018 VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 SUPERFAMILY SSF53697 9 316 7.12E-69 T 14-10-2018 VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 Gene3D G3DSA:3.10.580.10 196 320 2.6E-44 T 14-10-2018 VV1_0687 f3aa3595c6cff59638aa5d635af0ecd2 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 3.0E-113 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VV1_1394 58c4da4f38ffe07448b61855f7d9f90f 403 Gene3D G3DSA:2.40.160.50 171 400 2.0E-15 T 14-10-2018 VV1_1394 58c4da4f38ffe07448b61855f7d9f90f 403 Pfam PF01103 Surface antigen 133 376 1.3E-10 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VV1_1649 8817ee4dc389df40317db7d5b7f61ae2 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 229 3.5E-75 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VV1_1649 8817ee4dc389df40317db7d5b7f61ae2 238 Gene3D G3DSA:3.40.1350.60 81 236 5.9E-56 T 14-10-2018 VV1_1649 8817ee4dc389df40317db7d5b7f61ae2 238 Pfam PF03749 Sugar fermentation stimulation protein 14 229 1.5E-76 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VV1_1649 8817ee4dc389df40317db7d5b7f61ae2 238 Gene3D G3DSA:2.40.50.580 1 80 4.0E-26 T 14-10-2018 VV1_1649 8817ee4dc389df40317db7d5b7f61ae2 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 237 53.989 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.406 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.6E-42 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 Gene3D G3DSA:3.30.572.10 1 283 1.8E-80 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 SUPERFAMILY SSF55831 2 283 2.88E-91 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.7E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV1_0516 8abd770796337a055dd2ce38c16f53e0 283 Pfam PF00303 Thymidylate synthase 2 283 1.4E-74 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VV2_0793 05a595cb9992f14477516eab766f7028 166 SUPERFAMILY SSF48452 4 91 4.56E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Gene3D G3DSA:3.40.50.2300 128 283 2.2E-5 T 14-10-2018 VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SUPERFAMILY SSF55785 467 590 6.6E-19 T 14-10-2018 IPR035965 PAS domain superfamily VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SUPERFAMILY SSF141868 783 1031 2.09E-68 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Gene3D G3DSA:3.40.50.2300 70 281 2.2E-5 T 14-10-2018 VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SMART SM00091 482 547 0.0099 T 14-10-2018 IPR000014 PAS domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SMART SM00091 357 423 15.0 T 14-10-2018 IPR000014 PAS domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Pfam PF13426 PAS domain 493 591 6.8E-9 T 14-10-2018 IPR000014 PAS domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 480 600 9.1E-15 T 14-10-2018 IPR000014 PAS domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Gene3D G3DSA:3.30.450.20 343 482 1.4E-9 T 14-10-2018 VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Gene3D G3DSA:3.30.70.270 595 765 3.4E-46 T 14-10-2018 VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SMART SM00267 593 765 6.0E-46 T 14-10-2018 IPR000160 GGDEF domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Gene3D G3DSA:3.30.450.20 483 594 2.0E-18 T 14-10-2018 VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SMART SM00052 777 1024 1.6E-55 T 14-10-2018 IPR001633 EAL domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 600 764 2.1E-34 T 14-10-2018 IPR000160 GGDEF domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SUPERFAMILY SSF55785 345 468 2.79E-8 T 14-10-2018 IPR035965 PAS domain superfamily VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 SUPERFAMILY SSF55073 609 765 4.0E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Pfam PF00990 Diguanylate cyclase, GGDEF domain 604 761 2.1E-35 T 14-10-2018 IPR000160 GGDEF domain VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Gene3D G3DSA:3.20.20.450 766 1026 1.1E-75 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1110 6a914c0d7e72cb31af6d77810453a3a0 1039 Pfam PF00563 EAL domain 785 1019 1.4E-55 T 14-10-2018 IPR001633 EAL domain VV1_2658 6adca74207e1eb49ae3e140f910e5e2d 106 Pfam PF01740 STAS domain 10 99 2.1E-10 T 14-10-2018 IPR002645 STAS domain VV1_2658 6adca74207e1eb49ae3e140f910e5e2d 106 SUPERFAMILY SSF52091 7 101 1.77E-20 T 14-10-2018 IPR036513 STAS domain superfamily VV1_2658 6adca74207e1eb49ae3e140f910e5e2d 106 Gene3D G3DSA:3.30.750.24 2 105 6.6E-20 T 14-10-2018 IPR036513 STAS domain superfamily VV2_1678 f4c9365abd57f519c781f3c712e8d917 285 Pfam PF02698 DUF218 domain 6 132 5.3E-14 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VV1_0723 4bad2250fc4cba849228a2b1059a9a52 207 Pfam PF01583 Adenylylsulphate kinase 31 182 7.0E-72 T 14-10-2018 VV1_0723 4bad2250fc4cba849228a2b1059a9a52 207 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.171 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VV1_0723 4bad2250fc4cba849228a2b1059a9a52 207 SUPERFAMILY SSF52540 25 198 6.13E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0723 4bad2250fc4cba849228a2b1059a9a52 207 Gene3D G3DSA:3.40.50.300 9 206 2.1E-79 T 14-10-2018 VV1_0723 4bad2250fc4cba849228a2b1059a9a52 207 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 198 3.0E-83 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VV1_0231 0752662846074612c3ff241c5eb63189 141 SUPERFAMILY SSF140566 1 113 3.53E-20 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VV1_0231 0752662846074612c3ff241c5eb63189 141 Pfam PF05130 FlgN protein 2 131 7.3E-25 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 4.5E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 2.0E-17 T 14-10-2018 VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 SMART SM00344 6 115 2.3E-46 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 SUPERFAMILY SSF46785 4 65 8.27E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 SUPERFAMILY SSF54909 66 151 1.47E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 Gene3D G3DSA:3.30.70.920 58 152 7.2E-27 T 14-10-2018 VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 Gene3D G3DSA:1.10.10.10 1 57 4.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 6.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 6.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1112 39911c8c0a4414d6937a87fcfa0c7782 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 6.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_2351 54688c347d8c473a1c9c9c26d70b9fb2 415 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 24 398 5.2E-61 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VV1_2351 54688c347d8c473a1c9c9c26d70b9fb2 415 Pfam PF07690 Major Facilitator Superfamily 29 368 5.1E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_2351 54688c347d8c473a1c9c9c26d70b9fb2 415 Gene3D G3DSA:1.20.1720.10 24 399 4.2E-99 T 14-10-2018 VV1_2351 54688c347d8c473a1c9c9c26d70b9fb2 415 SUPERFAMILY SSF103473 23 403 6.28E-59 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.562 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.7E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.1E-74 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 Gene3D G3DSA:3.40.50.300 1 214 1.9E-77 T 14-10-2018 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 SUPERFAMILY SSF52540 1 193 2.34E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 Pfam PF00406 Adenylate kinase 5 185 2.4E-59 T 14-10-2018 VV1_0188 14c3df06f1f753d501feba0741a9d0b3 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VV2_0875 bc24d6da15284931b4d8d844a5057db3 268 Pfam PF02567 Phenazine biosynthesis-like protein 10 264 6.9E-62 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VV2_0875 bc24d6da15284931b4d8d844a5057db3 268 SUPERFAMILY SSF54506 4 268 1.26E-66 T 14-10-2018 VV2_0875 bc24d6da15284931b4d8d844a5057db3 268 PIRSF PIRSF016184 3 268 1.6E-50 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VV2_0875 bc24d6da15284931b4d8d844a5057db3 268 Gene3D G3DSA:3.10.310.10 118 256 8.8E-85 T 14-10-2018 VV2_0875 bc24d6da15284931b4d8d844a5057db3 268 Gene3D G3DSA:3.10.310.10 8 264 8.8E-85 T 14-10-2018 VV2_0875 bc24d6da15284931b4d8d844a5057db3 268 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 227 2.2E-37 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VV1_2673 edef0b575a3c676fea62a19379218623 368 Pfam PF00534 Glycosyl transferases group 1 187 332 2.0E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_2673 edef0b575a3c676fea62a19379218623 368 Gene3D G3DSA:3.40.50.2000 174 350 1.1E-60 T 14-10-2018 VV1_2673 edef0b575a3c676fea62a19379218623 368 SUPERFAMILY SSF53756 9 362 1.41E-69 T 14-10-2018 VV1_2673 edef0b575a3c676fea62a19379218623 368 Pfam PF13439 Glycosyltransferase Family 4 20 177 9.3E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VV1_2673 edef0b575a3c676fea62a19379218623 368 Gene3D G3DSA:3.40.50.2000 36 362 1.1E-60 T 14-10-2018 VV1_1673 817a06280ed2e8c121c84f7e9ea7e217 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VV1_1673 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.10.105.10 269 516 2.6E-194 T 14-10-2018 VV1_1673 817a06280ed2e8c121c84f7e9ea7e217 557 PIRSF PIRSF002741 2 539 9.2E-69 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV1_1673 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.90.76.10 63 169 2.6E-194 T 14-10-2018 VV1_1673 817a06280ed2e8c121c84f7e9ea7e217 557 SUPERFAMILY SSF53850 37 541 9.77E-106 T 14-10-2018 VV1_1673 817a06280ed2e8c121c84f7e9ea7e217 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 452 4.9E-76 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV1_1673 817a06280ed2e8c121c84f7e9ea7e217 557 Gene3D G3DSA:3.40.190.10 44 540 2.6E-194 T 14-10-2018 VV1_2228 558584a467315f0cf4f739760461db76 472 SUPERFAMILY SSF55073 315 464 3.84E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2228 558584a467315f0cf4f739760461db76 472 Gene3D G3DSA:3.30.70.270 298 466 2.5E-44 T 14-10-2018 VV1_2228 558584a467315f0cf4f739760461db76 472 SMART SM00267 298 465 1.6E-34 T 14-10-2018 IPR000160 GGDEF domain VV1_2228 558584a467315f0cf4f739760461db76 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 460 1.9E-33 T 14-10-2018 IPR000160 GGDEF domain VV1_2228 558584a467315f0cf4f739760461db76 472 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 464 5.9E-40 T 14-10-2018 IPR000160 GGDEF domain VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 Pfam PF00005 ABC transporter 353 500 6.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 SUPERFAMILY SSF52540 336 572 2.51E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 SUPERFAMILY SSF90123 7 325 2.35E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 Pfam PF00664 ABC transporter transmembrane region 21 291 1.8E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 Gene3D G3DSA:3.40.50.300 331 581 2.2E-72 T 14-10-2018 VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 SMART SM00382 361 547 9.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2300 2730a45e3e6d55c6443d0cd559d8d34b 581 Gene3D G3DSA:1.20.1560.10 6 318 3.6E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_1667 1b2c72515a1d89c9fdff420fa30e1514 296 Gene3D G3DSA:3.30.420.40 5 114 1.0E-67 T 14-10-2018 VV1_1667 1b2c72515a1d89c9fdff420fa30e1514 296 SUPERFAMILY SSF53067 1 111 3.98E-24 T 14-10-2018 VV1_1667 1b2c72515a1d89c9fdff420fa30e1514 296 SUPERFAMILY SSF53067 114 283 2.78E-43 T 14-10-2018 VV1_1667 1b2c72515a1d89c9fdff420fa30e1514 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 5.9E-46 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VV1_1667 1b2c72515a1d89c9fdff420fa30e1514 296 Gene3D G3DSA:3.30.420.40 115 261 1.0E-67 T 14-10-2018 VV1_1114 b350f6e7c7259d284d6582688d4a1ee5 296 Pfam PF00892 EamA-like transporter family 138 276 1.7E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_1114 b350f6e7c7259d284d6582688d4a1ee5 296 SUPERFAMILY SSF103481 35 128 3.79E-5 T 14-10-2018 VV1_1114 b350f6e7c7259d284d6582688d4a1ee5 296 SUPERFAMILY SSF103481 182 276 2.16E-5 T 14-10-2018 VV1_1114 b350f6e7c7259d284d6582688d4a1ee5 296 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.8E-73 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 Gene3D G3DSA:3.40.50.10490 99 292 5.1E-242 T 14-10-2018 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 SUPERFAMILY SSF53697 6 548 8.9E-227 T 14-10-2018 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 Gene3D G3DSA:3.40.50.10490 13 507 5.1E-242 T 14-10-2018 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 Pfam PF00342 Phosphoglucose isomerase 53 542 7.0E-254 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 Gene3D G3DSA:1.10.1390.10 508 550 3.8E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1396 3e8de8dfbcc8a6f1aed99e456d7b01aa 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.101 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0526 b9a4a9caae775fb44be9e1ffe7567f32 157 SUPERFAMILY SSF54534 16 156 8.64E-50 T 14-10-2018 VV2_0526 b9a4a9caae775fb44be9e1ffe7567f32 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 5.4E-11 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VV2_0526 b9a4a9caae775fb44be9e1ffe7567f32 157 Gene3D G3DSA:3.10.50.40 20 157 4.1E-52 T 14-10-2018 VV2_0526 b9a4a9caae775fb44be9e1ffe7567f32 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 9.7E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VV2_0344 604f777a5c3bf8daed6aef0b8dca265b 106 SUPERFAMILY SSF46785 14 105 1.08E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0344 604f777a5c3bf8daed6aef0b8dca265b 106 SMART SM00418 24 102 9.6E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0344 604f777a5c3bf8daed6aef0b8dca265b 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 41 4.7E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0344 604f777a5c3bf8daed6aef0b8dca265b 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 4.7E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0344 604f777a5c3bf8daed6aef0b8dca265b 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 4.7E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0344 604f777a5c3bf8daed6aef0b8dca265b 106 Gene3D G3DSA:1.10.10.10 11 106 9.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0344 604f777a5c3bf8daed6aef0b8dca265b 106 Pfam PF01022 Bacterial regulatory protein, arsR family 31 76 6.6E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 Gene3D G3DSA:1.10.238.260 280 393 2.3E-32 T 14-10-2018 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.356 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.9E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 SMART SM00917 369 499 4.1E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 SUPERFAMILY SSF110921 392 498 8.24E-21 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 SUPERFAMILY SSF51569 1 291 2.38E-100 T 14-10-2018 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.8E-237 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 Gene3D G3DSA:3.30.160.270 394 500 2.9E-7 T 14-10-2018 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 Pfam PF00682 HMGL-like 4 273 2.3E-101 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VV1_0654 e500defb8be47ecceda6043b560fa6e1 515 Gene3D G3DSA:3.20.20.70 1 277 7.1E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0319 c7b438f84d804eabbb8383847cc76b82 124 Pfam PF10719 Late competence development protein ComFB 8 85 6.3E-13 T 14-10-2018 IPR019657 Late competence development protein ComFB VV1_2293 80d593117ba5ff237a6476702665e505 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 1.6E-113 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 387 1.6E-111 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 4.6E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_2293 80d593117ba5ff237a6476702665e505 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site VV1_2293 80d593117ba5ff237a6476702665e505 401 Gene3D G3DSA:1.20.1740.10 3 400 2.4E-13 T 14-10-2018 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 SUPERFAMILY SSF47757 8 72 9.02E-6 T 14-10-2018 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 269 2.4E-40 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 138 154 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 1.0E-28 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 SUPERFAMILY SSF53335 77 256 5.86E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 SMART SM00138 11 274 4.2E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 Gene3D G3DSA:3.40.50.150 76 276 4.5E-58 T 14-10-2018 VV2_0377 d1e9541a07087b2530ed4389cc65d477 279 Pfam PF03705 CheR methyltransferase, all-alpha domain 13 63 5.7E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VV1_0136 52e64172a557f313ebf87dfa7d93d377 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.1E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VV1_0136 52e64172a557f313ebf87dfa7d93d377 565 SUPERFAMILY SSF56801 14 553 1.1E-150 T 14-10-2018 VV1_0136 52e64172a557f313ebf87dfa7d93d377 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV1_0136 52e64172a557f313ebf87dfa7d93d377 565 Gene3D G3DSA:3.30.300.310 458 559 3.6E-30 T 14-10-2018 VV1_0136 52e64172a557f313ebf87dfa7d93d377 565 Gene3D G3DSA:3.40.50.12780 9 457 2.3E-117 T 14-10-2018 VV1_0136 52e64172a557f313ebf87dfa7d93d377 565 Pfam PF00501 AMP-binding enzyme 29 461 3.2E-108 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV2_1216 6024ffb107bcf8b1c69b18de48f83f8e 283 Gene3D G3DSA:3.40.50.1820 61 264 3.4E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_1216 6024ffb107bcf8b1c69b18de48f83f8e 283 Pfam PF12146 Serine aminopeptidase, S33 84 184 4.9E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 VV2_1216 6024ffb107bcf8b1c69b18de48f83f8e 283 SUPERFAMILY SSF53474 34 266 7.09E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 Gene3D G3DSA:3.40.50.1000 14 267 2.6E-74 T 14-10-2018 IPR023214 HAD superfamily VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 ProSitePatterns PS01229 Hypothetical cof family signature 2. 223 245 - T 14-10-2018 VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 271 5.4E-66 T 14-10-2018 VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 14-10-2018 VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 SUPERFAMILY SSF56784 12 275 2.66E-69 T 14-10-2018 IPR036412 HAD-like superfamily VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 271 1.4E-59 T 14-10-2018 IPR000150 Cof family GO:0016787 VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 242 7.1E-32 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VV1_1136 75af7279bd82c9ee0e1d7ba772bc3309 276 Gene3D G3DSA:3.30.1240.10 91 198 2.6E-74 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 SUPERFAMILY SSF51905 1 312 8.91E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 SUPERFAMILY SSF55424 319 438 1.37E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 Gene3D G3DSA:3.50.50.60 111 436 2.3E-149 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 1.1E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 Gene3D G3DSA:3.50.50.60 2 336 2.3E-149 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.8E-22 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.8E-22 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.8E-22 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.8E-22 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 5.8E-22 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 7.5E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.1E-16 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 4.1E-16 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.1E-16 T 14-10-2018 VV1_0165 32c38d98ea7912ec039e3f44a6e99e1b 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 4.1E-16 T 14-10-2018 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 9.5E-27 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 SUPERFAMILY SSF54675 13 128 3.3E-33 T 14-10-2018 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 SUPERFAMILY SSF51690 130 294 2.67E-60 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 3.4E-96 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 PIRSF PIRSF006250 16 295 1.4E-102 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 Gene3D G3DSA:3.20.20.70 138 284 1.8E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 2.9E-60 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VV1_1627 3d0b774bf2c799f41e36995b28327f6a 295 Gene3D G3DSA:3.90.1170.20 21 293 1.8E-126 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VV1_1638 dd2bc3fdd7a5d0177fccda2d5c7105a0 556 SUPERFAMILY SSF52091 439 541 4.12E-13 T 14-10-2018 IPR036513 STAS domain superfamily VV1_1638 dd2bc3fdd7a5d0177fccda2d5c7105a0 556 Pfam PF00916 Sulfate permease family 11 376 4.7E-84 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VV1_1638 dd2bc3fdd7a5d0177fccda2d5c7105a0 556 Gene3D G3DSA:3.30.750.24 428 550 7.0E-17 T 14-10-2018 IPR036513 STAS domain superfamily VV1_1638 dd2bc3fdd7a5d0177fccda2d5c7105a0 556 Pfam PF01740 STAS domain 440 533 5.8E-15 T 14-10-2018 IPR002645 STAS domain VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 SUPERFAMILY SSF52540 68 351 1.85E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 Gene3D G3DSA:3.40.50.300 1 202 3.6E-65 T 14-10-2018 VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 Gene3D G3DSA:3.40.50.300 205 402 3.0E-44 T 14-10-2018 VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 SMART SM00487 19 212 8.6E-47 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 1.4E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 1.5E-25 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_1063 dc015e306b58196b37bc29c947c96bb7 412 SMART SM00490 250 331 4.2E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 SUPERFAMILY SSF47819 315 390 7.85E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 Pfam PF00570 HRDC domain 232 298 1.6E-10 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 Hamap MF_01899 Ribonuclease D [rnd]. 22 389 42.79 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 SUPERFAMILY SSF53098 17 228 1.52E-70 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 SUPERFAMILY SSF47819 212 320 8.94E-24 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 TIGRFAM TIGR01388 rnd: ribonuclease D 24 389 1.3E-141 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 Gene3D G3DSA:1.10.150.80 215 312 8.9E-18 T 14-10-2018 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 SMART SM00474 22 190 2.7E-45 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 Pfam PF01612 3'-5' exonuclease 22 189 1.5E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 Gene3D G3DSA:3.30.420.10 20 212 1.7E-67 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_0135 573a0c0b8b7ad3acdadc9084fcf186d0 390 Gene3D G3DSA:1.10.150.80 313 390 4.8E-26 T 14-10-2018 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 470 693 3.84E-59 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 618 877 9.2E-108 T 14-10-2018 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 239 468 7.9E-73 T 14-10-2018 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 643 6.1E-81 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 1 228 1.1E-85 T 14-10-2018 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Pfam PF05193 Peptidase M16 inactive domain 182 358 2.8E-24 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Pfam PF05193 Peptidase M16 inactive domain 648 823 1.5E-9 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VV1_1977 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 233 468 4.63E-78 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 703 909 6.46E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 SUPERFAMILY SSF63411 4 226 1.15E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 1.3E-36 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VV1_1977 481195880be5dc5ac188c27f263ed22e 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VV1_1977 481195880be5dc5ac188c27f263ed22e 925 Gene3D G3DSA:3.30.830.10 470 852 9.2E-108 T 14-10-2018 VV1_2768 9399bbbb32a728738b033daf389d2197 357 PIRSF PIRSF009283 1 355 3.6E-127 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VV1_2768 9399bbbb32a728738b033daf389d2197 357 SUPERFAMILY SSF54593 5 341 5.15E-81 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2768 9399bbbb32a728738b033daf389d2197 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 8.4E-58 T 14-10-2018 VV1_2768 9399bbbb32a728738b033daf389d2197 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.3E-134 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VV1_2768 9399bbbb32a728738b033daf389d2197 357 Gene3D G3DSA:3.10.180.10 158 355 1.8E-69 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2768 9399bbbb32a728738b033daf389d2197 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 5.4E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_2768 9399bbbb32a728738b033daf389d2197 357 Gene3D G3DSA:3.10.180.10 3 155 8.7E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_1411 95f9e9d298be8da90e48ed30b1083794 550 Pfam PF08019 Domain of unknown function (DUF1705) 60 211 1.4E-49 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VV2_1411 95f9e9d298be8da90e48ed30b1083794 550 Gene3D G3DSA:3.40.720.10 217 550 9.8E-83 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV2_1411 95f9e9d298be8da90e48ed30b1083794 550 Pfam PF00884 Sulfatase 242 532 1.2E-42 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV2_1411 95f9e9d298be8da90e48ed30b1083794 550 SUPERFAMILY SSF53649 306 504 1.45E-18 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.191 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 SUPERFAMILY SSF143975 3 420 7.06E-136 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 Pfam PF00920 Dehydratase family 34 604 3.0E-220 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 Gene3D G3DSA:3.50.30.80 421 573 3.3E-56 T 14-10-2018 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.3E-266 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1029 92a122bb69b8a6612f4e961e20f41557 613 SUPERFAMILY SSF52016 421 608 1.02E-61 T 14-10-2018 VV1_2639 b5b9977f2412e5bef2de2b1391dc6408 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VV1_2639 b5b9977f2412e5bef2de2b1391dc6408 1613 SUPERFAMILY SSF51735 945 1281 1.44E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2639 b5b9977f2412e5bef2de2b1391dc6408 1613 SUPERFAMILY SSF53223 754 940 8.82E-26 T 14-10-2018 VV1_2639 b5b9977f2412e5bef2de2b1391dc6408 1613 PIRSF PIRSF036761 1 1610 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VV1_0900 05fcdde3f837686a8a65706d004ee289 220 Gene3D G3DSA:3.40.50.300 6 205 3.8E-57 T 14-10-2018 VV1_0900 05fcdde3f837686a8a65706d004ee289 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 19 202 27.303 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VV1_0900 05fcdde3f837686a8a65706d004ee289 220 Pfam PF01926 50S ribosome-binding GTPase 33 151 1.2E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0900 05fcdde3f837686a8a65706d004ee289 220 SUPERFAMILY SSF52540 19 205 1.25E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0900 05fcdde3f837686a8a65706d004ee289 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 15 198 6.9E-73 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 SMART SM00448 5 118 1.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 Gene3D G3DSA:3.40.50.2300 2 134 1.1E-30 T 14-10-2018 VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 Pfam PF00072 Response regulator receiver domain 7 110 2.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 SUPERFAMILY SSF52738 155 343 3.01E-67 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 PIRSF PIRSF000876 2 344 1.3E-131 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 Gene3D G3DSA:3.40.50.180 149 344 2.3E-69 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 Pfam PF01339 CheB methylesterase 160 338 8.3E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 344 39.337 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV2_1161 7348e05d255f97bc4c49cfa0d9518a8a 344 SUPERFAMILY SSF52172 3 110 1.57E-27 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0125 83f4c77180960ba18b1a522c74f3815b 418 SMART SM00388 220 286 8.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0125 83f4c77180960ba18b1a522c74f3815b 418 Gene3D G3DSA:1.10.287.130 206 285 2.6E-11 T 14-10-2018 VV1_0125 83f4c77180960ba18b1a522c74f3815b 418 SUPERFAMILY SSF55874 286 407 3.76E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0125 83f4c77180960ba18b1a522c74f3815b 418 SUPERFAMILY SSF47384 205 284 3.92E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_0125 83f4c77180960ba18b1a522c74f3815b 418 Gene3D G3DSA:3.30.565.10 293 417 9.7E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0125 83f4c77180960ba18b1a522c74f3815b 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 284 2.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 Pfam PF01145 SPFH domain / Band 7 family 26 195 4.7E-34 T 14-10-2018 IPR001107 Band 7 domain VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 Gene3D G3DSA:3.30.479.30 50 182 4.0E-43 T 14-10-2018 VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 SUPERFAMILY SSF117892 53 187 1.96E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 SMART SM00244 22 180 7.3E-60 T 14-10-2018 IPR001107 Band 7 domain VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 PRINTS PR00721 Stomatin signature 175 196 9.5E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 PRINTS PR00721 Stomatin signature 132 155 9.5E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 PRINTS PR00721 Stomatin signature 77 98 9.5E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 PRINTS PR00721 Stomatin signature 112 129 9.5E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 PRINTS PR00721 Stomatin signature 156 174 9.5E-29 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site VV1_0202 7d944413ded72318e357bcc3e022c4a0 307 Pfam PF16200 C-terminal region of band_7 242 301 4.6E-7 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 VV1_2315 2940d6084c50c9ec3b25cded209b12da 437 SMART SM00267 250 422 2.1E-56 T 14-10-2018 IPR000160 GGDEF domain VV1_2315 2940d6084c50c9ec3b25cded209b12da 437 Gene3D G3DSA:3.30.70.270 254 423 3.4E-53 T 14-10-2018 VV1_2315 2940d6084c50c9ec3b25cded209b12da 437 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 415 6.0E-45 T 14-10-2018 IPR000160 GGDEF domain VV1_2315 2940d6084c50c9ec3b25cded209b12da 437 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 416 3.2E-44 T 14-10-2018 IPR000160 GGDEF domain VV1_2315 2940d6084c50c9ec3b25cded209b12da 437 SUPERFAMILY SSF55073 266 420 1.49E-46 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 Pfam PF00072 Response regulator receiver domain 186 303 1.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 SMART SM00448 184 305 2.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 PIRSF PIRSF002867 1 312 6.7E-104 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 Pfam PF01584 CheW-like domain 21 160 1.5E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 SUPERFAMILY SSF52172 183 309 6.69E-22 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:2.40.50.180 39 158 2.8E-28 T 14-10-2018 VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:2.30.30.40 24 152 2.8E-28 T 14-10-2018 VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 SUPERFAMILY SSF50341 16 161 1.57E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 Gene3D G3DSA:3.40.50.2300 182 311 1.0E-21 T 14-10-2018 VV1_2990 40279ae3a7f65c301d0a2cfae81c0c02 313 SMART SM00260 17 158 3.1E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 SMART SM00971 9 113 4.4E-58 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 1.7E-37 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.0E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:2.160.10.10 143 267 2.7E-37 T 14-10-2018 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 SUPERFAMILY SSF51161 8 258 5.24E-63 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 Gene3D G3DSA:1.10.3130.10 1 142 9.3E-52 T 14-10-2018 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 PIRSF PIRSF000441 75 262 4.9E-56 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 PIRSF PIRSF000441 7 73 120.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV1_1276 10f5ffd3b985c536652d967408ce9ae2 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_2985 054fd1e7603a701f0d9345c16484396a 353 Gene3D G3DSA:3.40.1750.20 206 270 2.5E-44 T 14-10-2018 VV1_2985 054fd1e7603a701f0d9345c16484396a 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 4.1E-55 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VV1_2985 054fd1e7603a701f0d9345c16484396a 353 Gene3D G3DSA:3.90.226.10 109 306 2.5E-44 T 14-10-2018 VV1_2985 054fd1e7603a701f0d9345c16484396a 353 Pfam PF01343 Peptidase family S49 166 314 1.0E-46 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VV1_2985 054fd1e7603a701f0d9345c16484396a 353 SUPERFAMILY SSF52096 103 303 2.6E-30 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_1899 38cb592cdfa2784f51dd0f0e0ad8e026 212 Gene3D G3DSA:3.40.50.170 2 212 1.2E-85 T 14-10-2018 VV1_1899 38cb592cdfa2784f51dd0f0e0ad8e026 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 1.0E-77 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VV1_1899 38cb592cdfa2784f51dd0f0e0ad8e026 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.875 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VV1_1899 38cb592cdfa2784f51dd0f0e0ad8e026 212 SUPERFAMILY SSF53328 2 194 1.18E-66 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1899 38cb592cdfa2784f51dd0f0e0ad8e026 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1899 38cb592cdfa2784f51dd0f0e0ad8e026 212 Pfam PF00551 Formyl transferase 2 182 5.6E-66 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1272 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1272 a68ce82ce0910ac51f43298133480ca9 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 2.7E-42 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR VV1_1272 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 9.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1272 a68ce82ce0910ac51f43298133480ca9 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 9.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1272 a68ce82ce0910ac51f43298133480ca9 211 Gene3D G3DSA:1.10.357.10 1 208 1.3E-65 T 14-10-2018 VV1_1272 a68ce82ce0910ac51f43298133480ca9 211 SUPERFAMILY SSF46689 2 72 1.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1535 6a512c8ae5ee25ca3cc2cf2e79b943f9 376 Gene3D G3DSA:1.10.287.470 96 219 1.2E-33 T 14-10-2018 VV2_1535 6a512c8ae5ee25ca3cc2cf2e79b943f9 376 Pfam PF13533 Biotin-lipoyl like 64 111 1.6E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_1535 6a512c8ae5ee25ca3cc2cf2e79b943f9 376 Gene3D G3DSA:2.40.50.100 62 255 1.2E-33 T 14-10-2018 VV2_1535 6a512c8ae5ee25ca3cc2cf2e79b943f9 376 Gene3D G3DSA:2.40.30.170 256 304 1.2E-33 T 14-10-2018 VV2_1535 6a512c8ae5ee25ca3cc2cf2e79b943f9 376 SUPERFAMILY SSF111369 61 184 3.27E-9 T 14-10-2018 VV2_0359 16cf59622c999a0d4d8b65f43ef77042 425 SUPERFAMILY SSF48452 57 235 7.96E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0359 16cf59622c999a0d4d8b65f43ef77042 425 Gene3D G3DSA:1.25.40.10 30 173 1.2E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0359 16cf59622c999a0d4d8b65f43ef77042 425 SMART SM00028 66 99 72.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0359 16cf59622c999a0d4d8b65f43ef77042 425 SMART SM00028 278 311 78.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0359 16cf59622c999a0d4d8b65f43ef77042 425 SMART SM00028 342 375 390.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0359 16cf59622c999a0d4d8b65f43ef77042 425 SMART SM00028 104 137 6.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0359 16cf59622c999a0d4d8b65f43ef77042 425 Gene3D G3DSA:1.25.40.10 174 315 7.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0616 f4cae6014eedbefa6fae02079d893ed5 135 PIRSF PIRSF006092 13 127 2.0E-27 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VV2_0616 f4cae6014eedbefa6fae02079d893ed5 135 Gene3D G3DSA:3.10.50.30 45 135 1.2E-26 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VV2_0616 f4cae6014eedbefa6fae02079d893ed5 135 Pfam PF14760 Rnk N-terminus 6 43 1.3E-11 T 14-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VV2_0616 f4cae6014eedbefa6fae02079d893ed5 135 SUPERFAMILY SSF54534 49 126 3.27E-16 T 14-10-2018 VV2_0616 f4cae6014eedbefa6fae02079d893ed5 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 8.3E-16 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VV1_2692 97b7e1437949374817b91d580f349776 395 SMART SM00421 330 387 1.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2692 97b7e1437949374817b91d580f349776 395 Gene3D G3DSA:1.10.10.10 313 390 1.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2692 97b7e1437949374817b91d580f349776 395 SUPERFAMILY SSF46894 323 387 6.46E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1270 fda08acf693457c865cab03cfc608c04 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VV2_1270 fda08acf693457c865cab03cfc608c04 915 Gene3D G3DSA:3.30.830.10 7 248 3.0E-58 T 14-10-2018 VV2_1270 fda08acf693457c865cab03cfc608c04 915 Pfam PF00675 Insulinase (Peptidase family M16) 49 160 2.4E-25 T 14-10-2018 IPR011765 Peptidase M16, N-terminal VV2_1270 fda08acf693457c865cab03cfc608c04 915 Gene3D G3DSA:3.30.830.10 254 466 1.8E-7 T 14-10-2018 VV2_1270 fda08acf693457c865cab03cfc608c04 915 SUPERFAMILY SSF63411 758 907 8.56E-13 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV2_1270 fda08acf693457c865cab03cfc608c04 915 Gene3D G3DSA:3.30.830.10 740 914 1.8E-12 T 14-10-2018 VV2_1270 fda08acf693457c865cab03cfc608c04 915 SUPERFAMILY SSF63411 26 237 2.97E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV2_1270 fda08acf693457c865cab03cfc608c04 915 Pfam PF05193 Peptidase M16 inactive domain 198 374 2.2E-13 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VV2_1270 fda08acf693457c865cab03cfc608c04 915 Pfam PF05193 Peptidase M16 inactive domain 669 847 1.0E-5 T 14-10-2018 IPR007863 Peptidase M16, C-terminal VV2_1270 fda08acf693457c865cab03cfc608c04 915 Gene3D G3DSA:3.30.830.10 507 716 6.8E-13 T 14-10-2018 VV2_1270 fda08acf693457c865cab03cfc608c04 915 SUPERFAMILY SSF63411 500 718 6.56E-25 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1917 8778c9f5a51e0e5c2f0491a5de1ba615 115 SUPERFAMILY SSF52833 2 114 6.47E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_1917 8778c9f5a51e0e5c2f0491a5de1ba615 115 Gene3D G3DSA:3.40.30.10 2 115 4.1E-43 T 14-10-2018 VV1_1917 8778c9f5a51e0e5c2f0491a5de1ba615 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 5.2E-32 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR VV1_1917 8778c9f5a51e0e5c2f0491a5de1ba615 115 Pfam PF03960 ArsC family 6 113 6.5E-20 T 14-10-2018 IPR006660 Arsenate reductase-like VV2_1358 ae47a5326ff11cd83dc47ef5b99771cb 219 SUPERFAMILY SSF56784 4 209 1.71E-26 T 14-10-2018 IPR036412 HAD-like superfamily VV2_1358 ae47a5326ff11cd83dc47ef5b99771cb 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 2.8E-25 T 14-10-2018 VV2_1358 ae47a5326ff11cd83dc47ef5b99771cb 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 3.5E-24 T 14-10-2018 VV2_1358 ae47a5326ff11cd83dc47ef5b99771cb 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 202 2.2E-49 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VV2_1358 ae47a5326ff11cd83dc47ef5b99771cb 219 Gene3D G3DSA:3.40.50.1000 6 216 1.5E-53 T 14-10-2018 IPR023214 HAD superfamily VV2_1358 ae47a5326ff11cd83dc47ef5b99771cb 219 Gene3D G3DSA:1.20.1440.100 17 90 1.5E-53 T 14-10-2018 VV1_0111 8a42136fa68ab7ed64fdd20d0ed51b4d 78 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 3 61 6.3E-17 T 14-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system VV2_0011 248616eb0eaf6c8098e1ebe2e5069764 438 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 427 50.675 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV2_0011 248616eb0eaf6c8098e1ebe2e5069764 438 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 423 1.1E-191 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV2_0011 248616eb0eaf6c8098e1ebe2e5069764 438 SUPERFAMILY SSF51905 1 427 1.05E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0011 248616eb0eaf6c8098e1ebe2e5069764 438 Pfam PF00890 FAD binding domain 5 411 4.4E-72 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV2_0011 248616eb0eaf6c8098e1ebe2e5069764 438 Gene3D G3DSA:3.50.50.60 2 116 6.3E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0011 248616eb0eaf6c8098e1ebe2e5069764 438 PIRSF PIRSF000141 2 430 1.0E-182 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VV1_1694 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 3.2E-21 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VV1_1694 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Gene3D G3DSA:3.30.300.70 1 80 9.2E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VV1_1694 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF74942 84 151 1.57E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VV1_1694 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Pfam PF02576 RimP N-terminal domain 12 83 4.8E-29 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VV1_1694 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.907 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VV1_1694 7e6d45ecbbe31e4c0ee3d42fb3287d8c 151 SUPERFAMILY SSF75420 2 83 4.71E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily VV2_1107 376d892c79227a61aa203b9244228751 403 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 274 364 4.3E-17 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VV2_1107 376d892c79227a61aa203b9244228751 403 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 178 401 8.0E-11 T 14-10-2018 VV2_1107 376d892c79227a61aa203b9244228751 403 SUPERFAMILY SSF102114 13 344 1.44E-45 T 14-10-2018 VV2_1107 376d892c79227a61aa203b9244228751 403 Pfam PF04055 Radical SAM superfamily 24 188 3.1E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV2_1107 376d892c79227a61aa203b9244228751 403 Gene3D G3DSA:3.20.20.70 15 386 3.8E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1107 376d892c79227a61aa203b9244228751 403 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 383 2.1E-151 T 14-10-2018 VV2_1107 376d892c79227a61aa203b9244228751 403 Pfam PF13186 Iron-sulfur cluster-binding domain 274 334 4.9E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VV2_1471 b800f05f21c393b815e845df78341c61 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VV2_1471 b800f05f21c393b815e845df78341c61 170 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 62 72 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VV2_1471 b800f05f21c393b815e845df78341c61 170 Gene3D G3DSA:2.60.40.200 20 170 3.0E-47 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VV2_1471 b800f05f21c393b815e845df78341c61 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 169 1.0E-32 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VV2_1471 b800f05f21c393b815e845df78341c61 170 SUPERFAMILY SSF49329 28 170 7.2E-49 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VV2_1456 b7132770aa64faf544d4300a55b080e7 295 SUPERFAMILY SSF103481 190 283 2.35E-15 T 14-10-2018 VV2_1456 b7132770aa64faf544d4300a55b080e7 295 Pfam PF00892 EamA-like transporter family 8 137 4.1E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1456 b7132770aa64faf544d4300a55b080e7 295 Pfam PF00892 EamA-like transporter family 149 279 1.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1456 b7132770aa64faf544d4300a55b080e7 295 SUPERFAMILY SSF103481 40 141 4.71E-10 T 14-10-2018 VV1_1364 c0202f0e35a89fb22e6c0e5e45de80ba 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 8.5E-199 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 VV1_1364 c0202f0e35a89fb22e6c0e5e45de80ba 388 Gene3D G3DSA:3.40.640.10 3 248 2.5E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_1364 c0202f0e35a89fb22e6c0e5e45de80ba 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VV1_1364 c0202f0e35a89fb22e6c0e5e45de80ba 388 SUPERFAMILY SSF53383 9 383 2.39E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_1364 c0202f0e35a89fb22e6c0e5e45de80ba 388 Gene3D G3DSA:3.90.1150.10 249 387 1.8E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_1364 c0202f0e35a89fb22e6c0e5e45de80ba 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 382 1.7E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VV1_1364 c0202f0e35a89fb22e6c0e5e45de80ba 388 PIRSF PIRSF001434 1 385 1.6E-130 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VV1_1122 dd113d522a19a533e11949c8f6051286 312 Gene3D G3DSA:3.30.160.40 222 307 5.6E-29 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.214 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 3.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 Gene3D G3DSA:3.40.190.10 7 211 1.6E-85 T 14-10-2018 VV1_1122 dd113d522a19a533e11949c8f6051286 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 1.5E-80 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 SUPERFAMILY SSF53850 6 220 3.26E-87 T 14-10-2018 VV1_1122 dd113d522a19a533e11949c8f6051286 312 Gene3D G3DSA:3.40.190.10 104 203 1.6E-85 T 14-10-2018 VV1_1122 dd113d522a19a533e11949c8f6051286 312 SUPERFAMILY SSF54782 221 310 2.75E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 PIRSF PIRSF001438 1 312 3.8E-124 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 5.5E-116 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1122 dd113d522a19a533e11949c8f6051286 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.2E-20 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 SUPERFAMILY SSF47323 657 939 9.35E-73 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 Pfam PF06827 Zinc finger found in FPG and IleRS 909 936 2.0E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 SUPERFAMILY SSF52374 4 652 2.21E-138 T 14-10-2018 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 Gene3D G3DSA:1.10.730.20 645 940 1.1E-84 T 14-10-2018 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 Gene3D G3DSA:3.40.50.620 25 634 5.9E-243 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 Gene3D G3DSA:3.90.740.10 195 413 5.9E-243 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 5.1E-295 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.478 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 9.9E-220 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 SUPERFAMILY SSF50677 205 408 9.1E-55 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 Pfam PF08264 Anticodon-binding domain of tRNA 690 850 3.1E-25 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VV1_0507 e4d341734d681aa7e83c3d661011a91a 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 Pfam PF14559 Tetratricopeptide repeat 352 416 2.2E-10 T 14-10-2018 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 SUPERFAMILY SSF48452 311 455 4.09E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 Gene3D G3DSA:1.25.40.10 264 469 7.4E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 Gene3D G3DSA:3.30.2010.10 76 148 1.0E-6 T 14-10-2018 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 483 42.196 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 SMART SM00028 426 459 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 SMART SM00028 307 340 56.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 SMART SM00028 341 374 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1907 8f78c0b66405cb370ce3d3f09630baec 484 Pfam PF01435 Peptidase family M48 70 252 5.1E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF52172 16 135 7.97E-21 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.40.50.2300 12 131 6.7E-18 T 14-10-2018 VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF52172 136 273 1.21E-31 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 412 6.2E-33 T 14-10-2018 IPR000160 GGDEF domain VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.30.70.270 265 416 2.7E-40 T 14-10-2018 VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00448 15 127 3.7E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00448 136 250 2.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00072 Response regulator receiver domain 17 116 8.0E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 Pfam PF00072 Response regulator receiver domain 139 247 9.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 414 5.9E-38 T 14-10-2018 IPR000160 GGDEF domain VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 SMART SM00267 256 416 1.2E-41 T 14-10-2018 IPR000160 GGDEF domain VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 SUPERFAMILY SSF55073 272 414 4.39E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1829 cc106d8cc7fd0410dab821c986d3b2f2 416 Gene3D G3DSA:3.40.50.2300 132 264 1.2E-31 T 14-10-2018 VV2_0513 c26c693d13376aa3d9353c8cffde71dd 446 Gene3D G3DSA:1.20.1250.20 239 438 7.3E-44 T 14-10-2018 VV2_0513 c26c693d13376aa3d9353c8cffde71dd 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VV2_0513 c26c693d13376aa3d9353c8cffde71dd 446 Pfam PF07690 Major Facilitator Superfamily 36 396 5.2E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0513 c26c693d13376aa3d9353c8cffde71dd 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 6.1E-141 T 14-10-2018 VV2_0513 c26c693d13376aa3d9353c8cffde71dd 446 SUPERFAMILY SSF103473 10 431 6.93E-81 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0513 c26c693d13376aa3d9353c8cffde71dd 446 PIRSF PIRSF002808 6 443 4.1E-145 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VV2_0513 c26c693d13376aa3d9353c8cffde71dd 446 Gene3D G3DSA:1.20.1250.20 19 223 6.8E-53 T 14-10-2018 VV1_2151 e44a25d315a7e037b9877af0693a313c 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 3.1E-59 T 14-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VV1_2151 e44a25d315a7e037b9877af0693a313c 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 4.9E-108 T 14-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VV1_1733 241d4568b3c2203249c6e8162262adf8 540 Pfam PF07695 7TM diverse intracellular signalling 180 372 4.2E-17 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 VV1_1733 241d4568b3c2203249c6e8162262adf8 540 SUPERFAMILY SSF55073 400 537 1.73E-31 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1733 241d4568b3c2203249c6e8162262adf8 540 SMART SM00267 385 540 1.2E-29 T 14-10-2018 IPR000160 GGDEF domain VV1_1733 241d4568b3c2203249c6e8162262adf8 540 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 537 8.3E-24 T 14-10-2018 IPR000160 GGDEF domain VV1_1733 241d4568b3c2203249c6e8162262adf8 540 Gene3D G3DSA:3.30.70.270 385 540 2.0E-33 T 14-10-2018 VV1_1733 241d4568b3c2203249c6e8162262adf8 540 Pfam PF00990 Diguanylate cyclase, GGDEF domain 395 536 2.0E-27 T 14-10-2018 IPR000160 GGDEF domain VV1_0807 49c9c6b8fb5a8e3331b033ff8596190b 387 SUPERFAMILY SSF53756 1 383 5.13E-95 T 14-10-2018 VV1_0807 49c9c6b8fb5a8e3331b033ff8596190b 387 Gene3D G3DSA:3.40.50.2000 3 368 4.4E-86 T 14-10-2018 VV1_0807 49c9c6b8fb5a8e3331b033ff8596190b 387 Gene3D G3DSA:3.40.50.2000 189 356 4.4E-86 T 14-10-2018 VV1_0807 49c9c6b8fb5a8e3331b033ff8596190b 387 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 370 4.3E-89 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_0807 49c9c6b8fb5a8e3331b033ff8596190b 387 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 369 1.7E-145 T 14-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 451 550 2.95E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF50249 608 695 9.42E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 234 550 1.3E-113 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:2.40.50.140 623 694 2.6E-29 T 14-10-2018 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54791 555 623 1.14E-15 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.4E-17 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 7.9E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00322 553 618 1.7E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF55666 146 236 3.23E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.16 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 5 145 1.27E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 2.7E-24 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.7E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.230.70 2 229 1.4E-77 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SMART SM00316 621 691 1.8E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Gene3D G3DSA:3.30.1370.10 551 622 1.1E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 Pfam PF00013 KH domain 557 615 1.0E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 PIRSF PIRSF005499 2 708 1.2E-295 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VV1_1708 5de812332fc70fca8bbd0194eaeec94f 708 SUPERFAMILY SSF54211 293 489 2.53E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_3020 74f831ec9effe307b50f1c1ca5bcb3f9 519 SUPERFAMILY SSF52091 416 498 4.91E-11 T 14-10-2018 IPR036513 STAS domain superfamily VV1_3020 74f831ec9effe307b50f1c1ca5bcb3f9 519 Pfam PF00916 Sulfate permease family 13 374 2.2E-57 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VV1_3020 74f831ec9effe307b50f1c1ca5bcb3f9 519 Pfam PF01740 STAS domain 417 503 1.2E-5 T 14-10-2018 IPR002645 STAS domain VV1_3020 74f831ec9effe307b50f1c1ca5bcb3f9 519 Gene3D G3DSA:3.30.750.24 408 499 2.5E-26 T 14-10-2018 IPR036513 STAS domain superfamily VV1_1783 91cfca85e40c68c2d23871e1790e0d87 366 SUPERFAMILY SSF55729 1 147 1.25E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1783 91cfca85e40c68c2d23871e1790e0d87 366 Pfam PF13673 Acetyltransferase (GNAT) domain 20 126 2.4E-17 T 14-10-2018 IPR000182 GNAT domain VV1_1783 91cfca85e40c68c2d23871e1790e0d87 366 Gene3D G3DSA:3.40.630.30 1 149 7.1E-32 T 14-10-2018 VV1_1783 91cfca85e40c68c2d23871e1790e0d87 366 Pfam PF11814 Peptidase_C39 like family 157 359 4.8E-80 T 14-10-2018 IPR021770 Protein of unknown function DUF3335 VV1_1143 2fc1509a39ba36aec4f08e6c43a5bf21 406 Pfam PF07690 Major Facilitator Superfamily 20 341 4.3E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_1143 2fc1509a39ba36aec4f08e6c43a5bf21 406 Gene3D G3DSA:1.20.1250.20 8 398 1.0E-25 T 14-10-2018 VV1_1143 2fc1509a39ba36aec4f08e6c43a5bf21 406 SUPERFAMILY SSF103473 10 400 3.01E-33 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_2654 19581ec1fbb72e22776957517d66d93d 350 Gene3D G3DSA:3.20.20.70 1 350 8.9E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2654 19581ec1fbb72e22776957517d66d93d 350 SUPERFAMILY SSF51569 8 347 8.06E-129 T 14-10-2018 VV1_2654 19581ec1fbb72e22776957517d66d93d 350 Pfam PF00793 DAHP synthetase I family 42 338 5.1E-99 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV1_2654 19581ec1fbb72e22776957517d66d93d 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.3E-159 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV1_2654 19581ec1fbb72e22776957517d66d93d 350 PIRSF PIRSF001361 2 350 8.3E-155 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV1_0625 dc2de8b1d8f312fd5c7968779fa9a034 119 Gene3D G3DSA:3.30.1130.10 1 118 5.1E-46 T 14-10-2018 VV1_0625 dc2de8b1d8f312fd5c7968779fa9a034 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 1.6E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VV1_0625 dc2de8b1d8f312fd5c7968779fa9a034 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 1.3E-29 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VV1_0625 dc2de8b1d8f312fd5c7968779fa9a034 119 SMART SM00905 6 116 9.5E-49 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VV1_0625 dc2de8b1d8f312fd5c7968779fa9a034 119 SUPERFAMILY SSF55620 3 117 3.45E-37 T 14-10-2018 VV1_0625 dc2de8b1d8f312fd5c7968779fa9a034 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 3.1E-36 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VV2_0404 d213b5726f911409ab106c1e3835962f 471 SUPERFAMILY SSF56959 127 331 1.18E-7 T 14-10-2018 IPR036435 Leukocidin/porin MspA superfamily VV2_0404 d213b5726f911409ab106c1e3835962f 471 Gene3D G3DSA:3.30.70.2270 153 203 1.1E-85 T 14-10-2018 VV2_0404 d213b5726f911409ab106c1e3835962f 471 SMART SM00458 338 465 4.4E-29 T 14-10-2018 IPR000772 Ricin B, lectin domain VV2_0404 d213b5726f911409ab106c1e3835962f 471 Gene3D G3DSA:2.70.240.10 36 333 1.1E-85 T 14-10-2018 VV2_0404 d213b5726f911409ab106c1e3835962f 471 Pfam PF07968 Leukocidin/Hemolysin toxin family 71 331 7.1E-66 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 VV2_0404 d213b5726f911409ab106c1e3835962f 471 Pfam PF00652 Ricin-type beta-trefoil lectin domain 339 429 1.8E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain VV2_0404 d213b5726f911409ab106c1e3835962f 471 Gene3D G3DSA:2.80.10.50 335 471 8.8E-44 T 14-10-2018 VV2_0404 d213b5726f911409ab106c1e3835962f 471 SUPERFAMILY SSF50370 334 462 5.4E-18 T 14-10-2018 IPR035992 Ricin B-like lectins VV1_2173 12f5c777612368ddb2619bdeaea3d1fb 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.632 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VV1_2173 12f5c777612368ddb2619bdeaea3d1fb 353 Gene3D G3DSA:3.40.50.10800 200 295 1.4E-93 T 14-10-2018 VV1_2173 12f5c777612368ddb2619bdeaea3d1fb 353 Gene3D G3DSA:3.40.50.10800 115 340 1.4E-93 T 14-10-2018 VV1_2173 12f5c777612368ddb2619bdeaea3d1fb 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.0E-113 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VV1_2173 12f5c777612368ddb2619bdeaea3d1fb 353 SUPERFAMILY SSF142754 29 341 1.57E-105 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VV1_2173 12f5c777612368ddb2619bdeaea3d1fb 353 Gene3D G3DSA:3.40.50.10800 32 322 1.4E-93 T 14-10-2018 VV1_2173 12f5c777612368ddb2619bdeaea3d1fb 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 1.4E-101 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 4.9E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 59 1.0E-10 T 14-10-2018 IPR004176 Clp, N-terminal VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SUPERFAMILY SSF52540 442 749 1.39E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:1.10.8.60 658 758 4.0E-31 T 14-10-2018 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 332 6.9E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:3.40.50.300 161 355 4.1E-62 T 14-10-2018 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:1.10.1780.10 1 143 5.1E-41 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SUPERFAMILY SSF52540 172 431 1.32E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SUPERFAMILY SSF81923 1 142 1.7E-58 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:1.10.8.60 356 443 1.3E-34 T 14-10-2018 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 738 1.5E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Gene3D G3DSA:3.40.50.300 444 657 5.6E-76 T 14-10-2018 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 739 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SMART SM01086 658 747 1.8E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SMART SM00382 492 659 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 SMART SM00382 211 356 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2121 ea653cbb8f94b1d07de5c7f63fae1e2a 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 652 1.7E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV2_1321 d24a78a14b3715a913306762ffbe64a5 440 SUPERFAMILY SSF111369 60 323 2.22E-8 T 14-10-2018 VV2_1321 d24a78a14b3715a913306762ffbe64a5 440 Gene3D G3DSA:1.10.287.470 103 218 5.0E-34 T 14-10-2018 VV2_1321 d24a78a14b3715a913306762ffbe64a5 440 Gene3D G3DSA:2.40.420.20 362 425 5.0E-34 T 14-10-2018 VV2_1321 d24a78a14b3715a913306762ffbe64a5 440 Gene3D G3DSA:2.40.30.170 60 361 5.0E-34 T 14-10-2018 VV2_1321 d24a78a14b3715a913306762ffbe64a5 440 Gene3D G3DSA:2.40.50.100 66 252 5.0E-34 T 14-10-2018 VV1_1223 26347a78fabb31e93264c0347986c73f 362 SUPERFAMILY SSF54631 181 315 8.1E-25 T 14-10-2018 VV1_1223 26347a78fabb31e93264c0347986c73f 362 Pfam PF01595 Domain of unknown function DUF21 9 177 5.2E-29 T 14-10-2018 IPR002550 CNNM, transmembrane domain VV1_1223 26347a78fabb31e93264c0347986c73f 362 Gene3D G3DSA:3.10.580.10 186 315 1.2E-39 T 14-10-2018 VV1_1223 26347a78fabb31e93264c0347986c73f 362 Pfam PF00571 CBS domain 262 313 4.3E-6 T 14-10-2018 IPR000644 CBS domain VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 SUPERFAMILY SSF100920 384 537 4.58E-52 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 Gene3D G3DSA:1.20.1270.10 520 616 6.8E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 Gene3D G3DSA:3.90.640.10 238 311 6.4E-111 T 14-10-2018 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.0E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 Pfam PF00012 Hsp70 protein 22 601 1.3E-187 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 Gene3D G3DSA:2.60.34.10 379 519 7.9E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 Gene3D G3DSA:3.30.420.40 23 374 6.4E-111 T 14-10-2018 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.404 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 SUPERFAMILY SSF53067 20 196 3.63E-50 T 14-10-2018 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 SUPERFAMILY SSF53067 200 377 3.41E-49 T 14-10-2018 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 7.1E-267 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 SUPERFAMILY SSF100934 504 615 6.08E-34 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VV1_0434 7b542100b3b569a725f3b9daff40daa5 617 Gene3D G3DSA:3.30.420.40 194 361 6.4E-111 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:1.20.1640.10 503 1005 2.7E-245 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:3.30.70.1430 557 655 2.7E-245 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 SUPERFAMILY SSF82714 711 788 6.02E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 SUPERFAMILY SSF82866 295 495 7.59E-32 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 SUPERFAMILY SSF82693 41 137 3.66E-17 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 SUPERFAMILY SSF82693 138 324 8.37E-19 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 SUPERFAMILY SSF82866 792 1012 8.37E-45 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 SUPERFAMILY SSF82714 187 269 1.7E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.4E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:3.30.70.1430 40 805 2.7E-245 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:3.30.2090.10 707 797 2.7E-245 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:3.30.70.1440 656 855 2.7E-245 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:3.30.2090.10 182 275 2.7E-245 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 SUPERFAMILY SSF82693 557 651 2.62E-6 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:1.20.1640.10 12 502 2.7E-245 T 14-10-2018 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Pfam PF00873 AcrB/AcrD/AcrF family 5 1007 3.2E-164 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0029 be7cd5b3fd945f9462ad4835f63c7765 1016 Gene3D G3DSA:3.30.70.1320 138 328 2.7E-245 T 14-10-2018 VV2_0367 ea376bd29e123760954c77188b2b748f 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV2_0367 ea376bd29e123760954c77188b2b748f 252 SUPERFAMILY SSF53790 12 252 2.09E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VV2_0367 ea376bd29e123760954c77188b2b748f 252 Gene3D G3DSA:3.40.1010.10 11 128 2.5E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VV2_0367 ea376bd29e123760954c77188b2b748f 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 224 4.7E-50 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VV2_0367 ea376bd29e123760954c77188b2b748f 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 93 126 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV2_0367 ea376bd29e123760954c77188b2b748f 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 246 4.7E-94 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VV2_0367 ea376bd29e123760954c77188b2b748f 252 Gene3D G3DSA:3.30.950.10 129 251 9.4E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 Gene3D G3DSA:3.40.190.80 143 267 1.1E-38 T 14-10-2018 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 Gene3D G3DSA:3.30.540.10 1 140 1.3E-50 T 14-10-2018 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.2E-33 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 Pfam PF00459 Inositol monophosphatase family 2 258 8.8E-71 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VV1_0441 2c652cad16a9467cdacfdd7d8587ff31 267 SUPERFAMILY SSF56655 1 259 2.49E-85 T 14-10-2018 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 601 672 3.4E-9 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 Pfam PF08453 Peptidase family M9 N-terminal 31 211 1.3E-54 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 Pfam PF01752 Collagenase 273 557 1.2E-110 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 Gene3D G3DSA:2.60.120.380 583 685 2.8E-12 T 14-10-2018 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 Gene3D G3DSA:2.60.120.380 705 806 2.3E-6 T 14-10-2018 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 Gene3D G3DSA:1.10.1740.190 302 449 4.6E-32 T 14-10-2018 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 457 472 4.5E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 391 407 4.5E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 451 4.5E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 373 387 4.5E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1146 dbc70e0f7b629504a2d3dd390bdfb3df 807 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 4.5E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 SUPERFAMILY SSF53706 42 660 7.59E-169 T 14-10-2018 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 14-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 Pfam PF00384 Molybdopterin oxidoreductase 87 561 2.2E-80 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.50.740 87 569 1.6E-241 T 14-10-2018 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 SUPERFAMILY SSF50692 669 817 5.42E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.90.55.10 82 615 1.6E-241 T 14-10-2018 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:3.40.228.10 179 641 1.6E-241 T 14-10-2018 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.3E-23 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VV1_2895 a7a1e328a174f12b507a78f18b5e3059 820 Gene3D G3DSA:2.40.40.20 649 813 5.8E-47 T 14-10-2018 VV1_0828 f1a0c343f74773975dc06fdaa2a648b1 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 7.5E-77 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VV1_0828 f1a0c343f74773975dc06fdaa2a648b1 401 Pfam PF02441 Flavoprotein 7 179 9.0E-45 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VV1_0828 f1a0c343f74773975dc06fdaa2a648b1 401 Gene3D G3DSA:3.40.50.10300 187 400 7.3E-86 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VV1_0828 f1a0c343f74773975dc06fdaa2a648b1 401 Gene3D G3DSA:3.40.50.1950 1 186 8.7E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VV1_0828 f1a0c343f74773975dc06fdaa2a648b1 401 SUPERFAMILY SSF102645 184 399 3.4E-81 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VV1_0828 f1a0c343f74773975dc06fdaa2a648b1 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 4.4E-152 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 VV1_0828 f1a0c343f74773975dc06fdaa2a648b1 401 SUPERFAMILY SSF52507 1 182 1.27E-61 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VV1_1792 777220183acd5e9f933d2b992e79d796 298 Gene3D G3DSA:3.40.190.290 94 295 1.4E-37 T 14-10-2018 VV1_1792 777220183acd5e9f933d2b992e79d796 298 Gene3D G3DSA:1.10.10.10 4 92 4.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1792 777220183acd5e9f933d2b992e79d796 298 SUPERFAMILY SSF53850 92 296 1.01E-41 T 14-10-2018 VV1_1792 777220183acd5e9f933d2b992e79d796 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1792 777220183acd5e9f933d2b992e79d796 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1792 777220183acd5e9f933d2b992e79d796 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1792 777220183acd5e9f933d2b992e79d796 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1792 777220183acd5e9f933d2b992e79d796 298 Pfam PF03466 LysR substrate binding domain 92 293 3.0E-47 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1792 777220183acd5e9f933d2b992e79d796 298 SUPERFAMILY SSF46785 5 113 2.2E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.344 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 SUPERFAMILY SSF54211 3 191 1.14E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 181 198 2.1E-31 T 14-10-2018 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 103 118 2.1E-31 T 14-10-2018 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 10 25 2.1E-31 T 14-10-2018 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 143 156 2.1E-31 T 14-10-2018 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 PRINTS PR00958 Homoserine kinase signature 260 275 2.1E-31 T 14-10-2018 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 Gene3D G3DSA:3.30.230.10 5 173 6.0E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 Pfam PF08544 GHMP kinases C terminal 218 292 1.2E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 SUPERFAMILY SSF55060 178 294 1.15E-32 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 Gene3D G3DSA:3.30.70.890 174 283 6.0E-90 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 313 9.7E-109 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 5.5E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VV1_0544 1ad918fa7f01bb1a7be23088ef9a7720 318 PIRSF PIRSF000676 1 316 6.1E-79 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VV1_0328 f35ea71c1aebad54aaa3eead6403a07e 415 SUPERFAMILY SSF53474 46 410 2.34E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0328 f35ea71c1aebad54aaa3eead6403a07e 415 Gene3D G3DSA:3.40.50.1820 18 415 2.1E-121 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0328 f35ea71c1aebad54aaa3eead6403a07e 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.006 T 14-10-2018 IPR010520 UPF0255 family VV1_0328 f35ea71c1aebad54aaa3eead6403a07e 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 1.9E-235 T 14-10-2018 IPR010520 UPF0255 family VV1_1522 47a0812d45bc3bc521f3f38d0de6e565 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 19.616 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VV1_1522 47a0812d45bc3bc521f3f38d0de6e565 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 91 1.0E-25 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 VV1_1522 47a0812d45bc3bc521f3f38d0de6e565 96 Gene3D G3DSA:3.30.1200.10 1 96 7.4E-34 T 14-10-2018 IPR036591 YggU-like superfamily VV1_1522 47a0812d45bc3bc521f3f38d0de6e565 96 SUPERFAMILY SSF69786 4 96 1.7E-31 T 14-10-2018 IPR036591 YggU-like superfamily VV1_1522 47a0812d45bc3bc521f3f38d0de6e565 96 SMART SM01152 8 84 3.4E-35 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VV1_1522 47a0812d45bc3bc521f3f38d0de6e565 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 3.1E-24 T 14-10-2018 IPR003746 Protein of unknown function DUF167 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Gene3D G3DSA:1.20.1330.10 44 165 1.5E-57 T 14-10-2018 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Gene3D G3DSA:1.20.1330.10 283 334 1.6E-32 T 14-10-2018 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.1E-34 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Gene3D G3DSA:1.20.58.1830 340 374 1.6E-32 T 14-10-2018 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Gene3D G3DSA:1.20.58.1830 5 32 1.5E-57 T 14-10-2018 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Pfam PF00700 Bacterial flagellin C-terminal helical region 290 374 7.6E-21 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Pfam PF07196 Flagellin hook IN motif 194 243 1.6E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 PRINTS PR00207 Flagellin signature 75 94 5.1E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 PRINTS PR00207 Flagellin signature 36 53 5.1E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 PRINTS PR00207 Flagellin signature 110 133 5.1E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 SUPERFAMILY SSF64518 1 374 1.83E-78 T 14-10-2018 VV1_0213 768f31b0a67ad49c4e26310cf08f2640 375 Gene3D G3DSA:2.170.280.10 187 282 1.6E-32 T 14-10-2018 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 SUPERFAMILY SSF46946 2 114 6.62E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.0E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:1.10.8.50 1 71 6.1E-28 T 14-10-2018 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 PIRSF PIRSF002134 1 118 3.3E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.2E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.048 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0739 0f5ea1e39b6612f69a8a6d04ced4e7fe 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.5E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:3.40.50.620 30 247 3.5E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.8E-128 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:2.40.240.10 348 466 1.0E-80 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 3.1E-63 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:2.40.240.10 340 547 1.0E-80 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:3.90.800.10 101 209 3.5E-106 T 14-10-2018 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Gene3D G3DSA:1.10.1160.10 261 339 6.6E-37 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.2E-295 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 SUPERFAMILY SSF50715 340 548 1.57E-78 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 SUPERFAMILY SSF52374 11 337 2.17E-103 T 14-10-2018 VV1_0176 fcb3cd07b87e6501306994e8a415b39f 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.196 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VV2_0882 e234bee2a6b7e1db53f81f107ccb875e 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.1E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0882 e234bee2a6b7e1db53f81f107ccb875e 276 Gene3D G3DSA:1.10.10.10 3 85 6.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0882 e234bee2a6b7e1db53f81f107ccb875e 276 SUPERFAMILY SSF46785 2 81 2.56E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0274 994ad6f2bfcd9f524ba7f9dd97ddd165 176 Pfam PF04390 Lipopolysaccharide-assembly 41 159 2.5E-11 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VV1_0274 994ad6f2bfcd9f524ba7f9dd97ddd165 176 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 24.436 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VV1_0274 994ad6f2bfcd9f524ba7f9dd97ddd165 176 Gene3D G3DSA:3.30.160.150 18 167 1.6E-49 T 14-10-2018 VV2_1682 f7e6d766dc7a02c4a44654154c7b00dd 827 Gene3D G3DSA:3.80.10.10 609 823 2.3E-30 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily VV2_1682 f7e6d766dc7a02c4a44654154c7b00dd 827 Gene3D G3DSA:3.80.10.10 331 608 1.8E-36 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily VV2_1682 f7e6d766dc7a02c4a44654154c7b00dd 827 SUPERFAMILY SSF52058 354 619 2.72E-21 T 14-10-2018 VV2_1682 f7e6d766dc7a02c4a44654154c7b00dd 827 Gene3D G3DSA:2.60.40.10 226 320 5.1E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1682 f7e6d766dc7a02c4a44654154c7b00dd 827 SUPERFAMILY SSF52058 611 792 1.47E-16 T 14-10-2018 VV2_1682 f7e6d766dc7a02c4a44654154c7b00dd 827 Gene3D G3DSA:2.60.40.10 153 224 3.7E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1682 f7e6d766dc7a02c4a44654154c7b00dd 827 Gene3D G3DSA:2.60.40.10 46 125 1.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0043 68b244c0420924aca96c056ae275befb 559 Gene3D G3DSA:3.40.640.10 118 440 9.8E-61 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0043 68b244c0420924aca96c056ae275befb 559 SUPERFAMILY SSF53383 95 555 1.04E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0043 68b244c0420924aca96c056ae275befb 559 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 99 462 1.3E-31 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 SUPERFAMILY SSF111369 258 330 4.05E-6 T 14-10-2018 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 Gene3D G3DSA:2.40.50.100 278 312 2.8E-16 T 14-10-2018 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 Gene3D G3DSA:2.40.50.100 122 183 4.0E-11 T 14-10-2018 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 Gene3D G3DSA:1.10.287.470 184 249 2.1E-10 T 14-10-2018 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 SUPERFAMILY SSF111369 122 249 1.7E-11 T 14-10-2018 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 Gene3D G3DSA:1.10.287.470 258 277 2.8E-16 T 14-10-2018 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 Gene3D G3DSA:2.40.30.170 313 351 2.8E-16 T 14-10-2018 VV2_0704 fc28161d8684ed95000f3be1b3a898d4 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 122 347 1.2E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_1952 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.1E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.1E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.1E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.1E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04542 Sigma-70 region 2 19 91 4.8E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 PIRSF PIRSF000770 3 243 2.4E-37 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04545 Sigma-70, region 4 187 234 2.5E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.10.1740.10 4 88 2.2E-28 T 14-10-2018 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88659 161 239 1.25E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1952 19c20735a79bb1141cb020bddb97b963 244 Gene3D G3DSA:1.20.140.160 90 239 4.5E-43 T 14-10-2018 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 3.1E-84 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88659 92 159 1.09E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1952 19c20735a79bb1141cb020bddb97b963 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 3.9E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 SUPERFAMILY SSF88946 6 91 2.75E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 Pfam PF04539 Sigma-70 region 3 101 171 3.3E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VV1_1952 19c20735a79bb1141cb020bddb97b963 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 63.819 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 SUPERFAMILY SSF82693 138 328 2.88E-23 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 SUPERFAMILY SSF82714 185 269 4.97E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:1.20.1640.10 509 1030 5.7E-274 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 SUPERFAMILY SSF82714 716 800 3.14E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:3.30.70.1430 562 664 5.7E-274 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 2.5E-246 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:3.30.2090.10 716 804 5.7E-274 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:3.30.70.1320 135 328 5.7E-274 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.1E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.1E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.1E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.1E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.1E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.1E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.1E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 SUPERFAMILY SSF82693 46 127 6.8E-20 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:3.30.2090.10 182 274 5.7E-274 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1034 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 SUPERFAMILY SSF82866 294 498 1.44E-42 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:1.20.1640.10 15 508 5.7E-274 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:3.30.70.1430 42 812 5.7E-274 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 Gene3D G3DSA:3.30.70.1440 665 862 5.7E-274 T 14-10-2018 VV2_0852 4a74228f483ebec0b71807b8e657aeed 1042 SUPERFAMILY SSF82866 798 1035 3.4E-51 T 14-10-2018 VV1_2753 d85b36ab1b3646decafde7af48433465 257 SMART SM00420 10 63 1.0E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_2753 d85b36ab1b3646decafde7af48433465 257 Pfam PF00455 DeoR C terminal sensor domain 79 237 3.2E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VV1_2753 d85b36ab1b3646decafde7af48433465 257 SMART SM01134 77 238 4.5E-58 T 14-10-2018 VV1_2753 d85b36ab1b3646decafde7af48433465 257 Pfam PF08220 DeoR-like helix-turn-helix domain 10 65 1.1E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_2753 d85b36ab1b3646decafde7af48433465 257 SUPERFAMILY SSF100950 78 236 5.44E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV1_2753 d85b36ab1b3646decafde7af48433465 257 SUPERFAMILY SSF46785 7 80 5.96E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2753 d85b36ab1b3646decafde7af48433465 257 Gene3D G3DSA:1.10.10.10 2 60 4.5E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2753 d85b36ab1b3646decafde7af48433465 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 1.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_2753 d85b36ab1b3646decafde7af48433465 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 1.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_2753 d85b36ab1b3646decafde7af48433465 257 Gene3D G3DSA:3.30.750.70 78 143 6.0E-5 T 14-10-2018 VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 Pfam PF13488 Glycine zipper 40 87 5.9E-12 T 14-10-2018 IPR039567 Glycine zipper domain VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 Gene3D G3DSA:3.30.1330.60 81 223 1.6E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 PRINTS PR01021 OMPA domain signature 119 141 8.4E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 PRINTS PR01021 OMPA domain signature 149 164 8.4E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 PRINTS PR01021 OMPA domain signature 164 180 8.4E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 SUPERFAMILY SSF103088 107 222 1.57E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 Pfam PF00691 OmpA family 119 213 2.1E-18 T 14-10-2018 IPR006665 OmpA-like domain VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 182 201 7.2E-5 T 14-10-2018 VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 164 181 7.2E-5 T 14-10-2018 VV1_2382 dfbd7f4091a1288e605364c7e49469aa 223 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 202 222 7.2E-5 T 14-10-2018 VV2_1064 ccb93d918e8834e06ff45899fadd0561 395 SUPERFAMILY SSF51658 1 384 5.47E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VV2_1064 ccb93d918e8834e06ff45899fadd0561 395 PIRSF PIRSF016049 1 394 1.2E-176 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VV2_1064 ccb93d918e8834e06ff45899fadd0561 395 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 395 223.577 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VV2_1064 ccb93d918e8834e06ff45899fadd0561 395 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 1.9E-212 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VV2_1064 ccb93d918e8834e06ff45899fadd0561 395 Gene3D G3DSA:3.20.20.150 1 173 1.5E-70 T 14-10-2018 VV2_1064 ccb93d918e8834e06ff45899fadd0561 395 Gene3D G3DSA:3.20.20.150 174 395 1.8E-79 T 14-10-2018 VV2_1064 ccb93d918e8834e06ff45899fadd0561 395 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 5.4E-156 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 Gene3D G3DSA:3.40.50.300 210 372 1.1E-47 T 14-10-2018 VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 Gene3D G3DSA:3.30.70.330 385 458 1.6E-17 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 Pfam PF00270 DEAD/DEAH box helicase 27 193 8.0E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 Pfam PF03880 DbpA RNA binding domain 385 455 1.1E-19 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 SUPERFAMILY SSF52540 72 358 2.19E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 Gene3D G3DSA:3.40.50.300 2 209 6.6E-72 T 14-10-2018 VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 SMART SM00490 256 337 2.3E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 Pfam PF00271 Helicase conserved C-terminal domain 230 337 2.0E-28 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0136 8c57345e62a19e4129049cd0ec395a3d 459 SMART SM00487 22 219 6.4E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 SMART SM00267 428 596 2.1E-51 T 14-10-2018 IPR000160 GGDEF domain VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 SUPERFAMILY SSF55073 444 594 4.79E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 SUPERFAMILY SSF158472 381 429 8.37E-5 T 14-10-2018 VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 Pfam PF00990 Diguanylate cyclase, GGDEF domain 439 592 1.3E-38 T 14-10-2018 IPR000160 GGDEF domain VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 Gene3D G3DSA:1.20.1480.50 348 435 4.4E-7 T 14-10-2018 VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 594 4.5E-44 T 14-10-2018 IPR000160 GGDEF domain VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 SMART SM00304 381 433 0.001 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0940 8375909fdfb251bf80ed78d219dd1614 607 Gene3D G3DSA:3.30.70.270 436 601 5.1E-45 T 14-10-2018 VV1_1049 a92f1c44afdb608455830491e0f174ae 365 SMART SM00257 39 87 2.0E-4 T 14-10-2018 IPR018392 LysM domain VV1_1049 a92f1c44afdb608455830491e0f174ae 365 Pfam PF01476 LysM domain 40 85 7.3E-12 T 14-10-2018 IPR018392 LysM domain VV1_1049 a92f1c44afdb608455830491e0f174ae 365 Gene3D G3DSA:3.10.350.10 38 85 6.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1049 a92f1c44afdb608455830491e0f174ae 365 SUPERFAMILY SSF54106 38 86 1.1E-6 T 14-10-2018 VV2_1495 78097a8ec0934972be60a4aa3c558bf7 85 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 10 82 3.9E-8 T 14-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family VV2_1495 78097a8ec0934972be60a4aa3c558bf7 85 Gene3D G3DSA:3.90.1720.10 6 84 1.8E-7 T 14-10-2018 VV2_1495 78097a8ec0934972be60a4aa3c558bf7 85 SUPERFAMILY SSF54001 10 84 9.81E-11 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 SUPERFAMILY SSF48179 205 382 2.58E-44 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 40.546 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 Gene3D G3DSA:3.40.50.720 2 206 1.5E-77 T 14-10-2018 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 SUPERFAMILY SSF51735 3 202 5.69E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 Gene3D G3DSA:1.10.1040.10 208 382 6.2E-64 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 2.8E-58 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV1_0639 7a6a5ffc1fa2b260ac529f906f28f4de 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 7.9E-23 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 SUPERFAMILY SSF46785 917 982 2.54E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 Gene3D G3DSA:3.40.50.300 597 899 1.0E-120 T 14-10-2018 VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 Pfam PF01580 FtsK/SpoIIIE family 600 813 1.2E-71 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 1.3E-41 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 Gene3D G3DSA:1.10.10.10 911 978 3.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 SMART SM00843 917 982 2.2E-38 T 14-10-2018 IPR018541 FtsK gamma domain VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 Gene3D G3DSA:3.30.980.40 492 596 6.5E-33 T 14-10-2018 VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 SUPERFAMILY SSF52540 574 886 2.52E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2950 295a88aad2ccc326d385ec6c3ce1a467 985 Pfam PF09397 Ftsk gamma domain 919 979 1.1E-25 T 14-10-2018 IPR018541 FtsK gamma domain VV1_1728 0b7e64ad5c8f6d6630ba8921306e41ca 239 Gene3D G3DSA:3.40.50.1580 1 237 3.2E-76 T 14-10-2018 VV1_1728 0b7e64ad5c8f6d6630ba8921306e41ca 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_1728 0b7e64ad5c8f6d6630ba8921306e41ca 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.1E-120 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV1_1728 0b7e64ad5c8f6d6630ba8921306e41ca 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.76 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV1_1728 0b7e64ad5c8f6d6630ba8921306e41ca 239 SUPERFAMILY SSF53167 3 234 5.11E-93 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VV1_1728 0b7e64ad5c8f6d6630ba8921306e41ca 239 Pfam PF01048 Phosphorylase superfamily 15 220 1.8E-39 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV1_2205 3a169ea8442756c38db9e81a3a30015a 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 170 332 4.3E-17 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV1_2205 3a169ea8442756c38db9e81a3a30015a 596 SUPERFAMILY SSF53850 130 594 1.81E-59 T 14-10-2018 VV1_2205 3a169ea8442756c38db9e81a3a30015a 596 Gene3D G3DSA:3.40.190.10 128 359 3.9E-27 T 14-10-2018 VV1_2205 3a169ea8442756c38db9e81a3a30015a 596 Pfam PF12793 Sugar transport-related sRNA regulator N-term 13 126 6.4E-33 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VV1_1241 6d9ab45ff41a328dc62b173df80adcc6 396 PIRSF PIRSF004925 2 389 3.3E-104 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VV1_1241 6d9ab45ff41a328dc62b173df80adcc6 396 Gene3D G3DSA:1.20.1250.20 2 183 6.2E-16 T 14-10-2018 VV1_1241 6d9ab45ff41a328dc62b173df80adcc6 396 SUPERFAMILY SSF103473 8 373 3.53E-35 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_1241 6d9ab45ff41a328dc62b173df80adcc6 396 Pfam PF12832 MFS_1 like family 13 361 1.6E-40 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain VV1_1241 6d9ab45ff41a328dc62b173df80adcc6 396 Gene3D G3DSA:1.20.1250.20 195 387 7.2E-31 T 14-10-2018 VV1_1193 13b0c10a0777775d797934353b02802e 177 Gene3D G3DSA:3.30.420.470 4 171 2.6E-12 T 14-10-2018 VV1_1193 13b0c10a0777775d797934353b02802e 177 Pfam PF13358 DDE superfamily endonuclease 7 146 1.3E-27 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 9 347 2.9E-139 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 Hamap MF_00219 Dihydroorotase [pyrC]. 7 347 47.126 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 PIRSF PIRSF001237 5 347 1.4E-142 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 Pfam PF01979 Amidohydrolase family 16 322 1.0E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 ProSitePatterns PS00482 Dihydroorotase signature 1. 16 24 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 SUPERFAMILY SSF51556 6 347 1.96E-146 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV2_1596 23c56a15d2ea81295089acf83b95c2f6 347 Gene3D G3DSA:3.20.20.140 7 347 2.0E-110 T 14-10-2018 VV1_2603 79d1518eeb3fb15453bade9f05d1bdcf 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 7.7E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2603 79d1518eeb3fb15453bade9f05d1bdcf 285 Gene3D G3DSA:1.10.3720.10 6 277 7.6E-54 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2603 79d1518eeb3fb15453bade9f05d1bdcf 285 SUPERFAMILY SSF161098 9 274 2.49E-54 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1270 0815ce5d85c45c238e285f0abca2ac3c 323 SUPERFAMILY SSF55681 10 320 1.11E-81 T 14-10-2018 VV1_1270 0815ce5d85c45c238e285f0abca2ac3c 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 97 114 2.8E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_1270 0815ce5d85c45c238e285f0abca2ac3c 323 PRINTS PR00982 Lysyl-tRNA synthetase signature 29 39 2.8E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_1270 0815ce5d85c45c238e285f0abca2ac3c 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 52.826 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VV1_1270 0815ce5d85c45c238e285f0abca2ac3c 323 Gene3D G3DSA:3.30.930.10 1 322 6.1E-109 T 14-10-2018 VV1_1270 0815ce5d85c45c238e285f0abca2ac3c 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 319 2.2E-43 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1270 0815ce5d85c45c238e285f0abca2ac3c 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 3.8E-127 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.3E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 14-10-2018 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 SMART SM00662 23 235 1.0E-103 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF56553 53 179 1.73E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:3.30.1360.10 17 229 1.1E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 1.2E-111 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:2.170.120.12 53 178 1.1E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 14-10-2018 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0736 4620ebc6b5a5872619646f6a3aaac60a 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.681 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_2850 a473d27929276a4db2ae8e6328d6f475 92 Pfam PF01386 Ribosomal L25p family 4 89 2.0E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VV1_2850 a473d27929276a4db2ae8e6328d6f475 92 Gene3D G3DSA:2.40.240.10 1 92 8.5E-35 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_2850 a473d27929276a4db2ae8e6328d6f475 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.282 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VV1_2850 a473d27929276a4db2ae8e6328d6f475 92 SUPERFAMILY SSF50715 1 92 6.1E-28 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VV1_2850 a473d27929276a4db2ae8e6328d6f475 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 6.0E-48 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VV1_0078 f432c561893b008dec8e813da64e02dd 234 SUPERFAMILY SSF56349 20 226 5.89E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_0078 f432c561893b008dec8e813da64e02dd 234 Pfam PF00589 Phage integrase family 20 217 4.5E-21 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_0078 f432c561893b008dec8e813da64e02dd 234 Gene3D G3DSA:1.10.443.10 16 233 3.6E-27 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 Gene3D G3DSA:1.10.10.10 124 228 1.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 3.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 Gene3D G3DSA:3.40.50.2300 1 121 6.7E-38 T 14-10-2018 VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 SMART SM00448 1 112 1.2E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 222 2.8E-101 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 SUPERFAMILY SSF52172 1 178 5.89E-40 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0991 a1a4ba08ce3f534c015c1310f7efbb47 231 SMART SM00862 147 222 3.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_0872 f9519e766599c6c55165eb4b590f08ea 120 Pfam PF02501 Type II secretion system (T2SS), protein I 43 118 1.4E-22 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VV1_0872 f9519e766599c6c55165eb4b590f08ea 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 106 2.8E-36 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VV1_0872 f9519e766599c6c55165eb4b590f08ea 120 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 2.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0872 f9519e766599c6c55165eb4b590f08ea 120 Gene3D G3DSA:3.30.1300.30 33 120 8.4E-39 T 14-10-2018 VV1_0872 f9519e766599c6c55165eb4b590f08ea 120 SUPERFAMILY SSF54523 40 118 2.04E-23 T 14-10-2018 VV1_0872 f9519e766599c6c55165eb4b590f08ea 120 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0872 f9519e766599c6c55165eb4b590f08ea 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 4.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 Gene3D G3DSA:3.40.50.300 1 285 8.1E-88 T 14-10-2018 VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 SMART SM00382 348 518 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 SMART SM00382 31 236 5.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 4.2E-292 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 Pfam PF12848 ABC transporter 230 306 4.1E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 SUPERFAMILY SSF52540 9 243 4.46E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 Gene3D G3DSA:3.40.50.300 286 555 4.2E-76 T 14-10-2018 VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 Pfam PF00005 ABC transporter 22 191 8.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 SUPERFAMILY SSF52540 303 525 2.52E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 Pfam PF00005 ABC transporter 340 473 1.2E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0491 73a260c46bb3f59cc3b41d0e7fb899b3 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1654 2f893bf7b1b09b0febb8087b08ade9dd 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 373 2.9E-163 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV1_1654 2f893bf7b1b09b0febb8087b08ade9dd 378 Gene3D G3DSA:3.40.50.10350 2 361 1.7E-143 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VV1_1654 2f893bf7b1b09b0febb8087b08ade9dd 378 Pfam PF02595 Glycerate kinase family 3 372 1.2E-151 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV1_1654 2f893bf7b1b09b0febb8087b08ade9dd 378 PIRSF PIRSF006078 1 377 9.9E-141 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VV1_1654 2f893bf7b1b09b0febb8087b08ade9dd 378 Gene3D G3DSA:3.90.1510.10 42 276 1.7E-143 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VV1_1654 2f893bf7b1b09b0febb8087b08ade9dd 378 SUPERFAMILY SSF110738 1 375 2.48E-145 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VV1_1842 cb6a822e4598a4ca3f26bb98bf6d9dd0 369 Gene3D G3DSA:3.30.470.20 186 269 2.7E-9 T 14-10-2018 VV1_1842 cb6a822e4598a4ca3f26bb98bf6d9dd0 369 SUPERFAMILY SSF56059 124 278 1.36E-12 T 14-10-2018 VV1_1842 cb6a822e4598a4ca3f26bb98bf6d9dd0 369 Gene3D G3DSA:3.30.1490.20 102 185 2.7E-9 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_1842 cb6a822e4598a4ca3f26bb98bf6d9dd0 369 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 258 265 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_1842 cb6a822e4598a4ca3f26bb98bf6d9dd0 369 Gene3D G3DSA:3.40.50.20 3 101 2.7E-9 T 14-10-2018 VV1_1842 cb6a822e4598a4ca3f26bb98bf6d9dd0 369 Pfam PF02655 ATP-grasp domain 110 267 1.5E-5 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14841 FliG middle domain 134 206 2.7E-25 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PIRSF PIRSF003161 18 351 2.7E-113 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF14842 FliG N-terminal domain 24 124 2.8E-27 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 107 212 5.0E-29 T 14-10-2018 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 214 351 8.6E-44 T 14-10-2018 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 133 344 8.63E-67 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 SUPERFAMILY SSF48029 25 136 4.58E-20 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 Pfam PF01706 FliG C-terminal domain 236 343 1.8E-41 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 7.4E-60 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 Gene3D G3DSA:1.10.220.30 20 104 1.5E-17 T 14-10-2018 VV1_1936 75f594f89c55c2e6c82ca1df568fdd32 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 2.9E-96 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VV1_2670 859221717d826ded1dc7d1d379fb2ac2 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 202 233 3.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_2670 859221717d826ded1dc7d1d379fb2ac2 256 SUPERFAMILY SSF51161 132 251 1.83E-30 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_2670 859221717d826ded1dc7d1d379fb2ac2 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 207 235 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV1_2670 859221717d826ded1dc7d1d379fb2ac2 256 Gene3D G3DSA:2.160.10.10 88 254 4.6E-36 T 14-10-2018 VV1_2085 2550beb03b2295fb08c7799049b938ac 583 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2085 2550beb03b2295fb08c7799049b938ac 583 SUPERFAMILY SSF90123 14 327 1.7E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2085 2550beb03b2295fb08c7799049b938ac 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 6.7E-244 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VV1_2085 2550beb03b2295fb08c7799049b938ac 583 Pfam PF00005 ABC transporter 359 509 2.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2085 2550beb03b2295fb08c7799049b938ac 583 Gene3D G3DSA:1.20.1560.10 2 328 9.3E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2085 2550beb03b2295fb08c7799049b938ac 583 SUPERFAMILY SSF52540 332 580 4.07E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2085 2550beb03b2295fb08c7799049b938ac 583 Gene3D G3DSA:3.40.50.300 329 581 7.6E-97 T 14-10-2018 VV1_2085 2550beb03b2295fb08c7799049b938ac 583 SMART SM00382 368 555 1.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2085 2550beb03b2295fb08c7799049b938ac 583 Pfam PF00664 ABC transporter transmembrane region 28 293 2.5E-55 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV1_2080 9d9c0326038ad98836f1854db960241b 401 Pfam PF02687 FtsX-like permease family 295 394 2.8E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV1_2080 9d9c0326038ad98836f1854db960241b 401 Pfam PF12704 MacB-like periplasmic core domain 29 202 3.0E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VV1_2080 9d9c0326038ad98836f1854db960241b 401 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 401 5.7E-130 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.4E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.8E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 SUPERFAMILY SSF50129 1 95 1.17E-31 T 14-10-2018 IPR011032 GroES-like superfamily VV1_1259 f4e65b0978431a86bc740c098f333da6 96 SMART SM00883 2 95 8.8E-51 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.088 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VV1_1259 f4e65b0978431a86bc740c098f333da6 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VV2_1082 3bc86885c9592d8350dc35a945667d7e 230 SMART SM01007 7 197 1.2E-65 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VV2_1082 3bc86885c9592d8350dc35a945667d7e 230 SUPERFAMILY SSF53639 2 220 3.34E-65 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VV2_1082 3bc86885c9592d8350dc35a945667d7e 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.3E-43 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal VV2_1082 3bc86885c9592d8350dc35a945667d7e 230 Gene3D G3DSA:3.40.225.10 1 229 8.3E-57 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VV2_0952 a4a3f648d82e767ebf63989dce8fcd58 546 SUPERFAMILY SSF53474 76 481 1.75E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0952 a4a3f648d82e767ebf63989dce8fcd58 546 Pfam PF07519 Tannase and feruloyl esterase 87 539 1.9E-86 T 14-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 VV2_0952 a4a3f648d82e767ebf63989dce8fcd58 546 Gene3D G3DSA:3.40.50.1820 83 274 9.5E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_1923 7b22bec905938563fa23dbaef3674764 377 SUPERFAMILY SSF64518 5 376 2.35E-94 T 14-10-2018 VV1_1923 7b22bec905938563fa23dbaef3674764 377 Gene3D G3DSA:1.20.1330.10 183 328 4.3E-18 T 14-10-2018 VV1_1923 7b22bec905938563fa23dbaef3674764 377 Gene3D G3DSA:1.10.8.410 329 376 4.9E-18 T 14-10-2018 VV1_1923 7b22bec905938563fa23dbaef3674764 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 4.9E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_1923 7b22bec905938563fa23dbaef3674764 377 Gene3D G3DSA:1.20.58.1830 5 33 3.7E-74 T 14-10-2018 VV1_1923 7b22bec905938563fa23dbaef3674764 377 Gene3D G3DSA:1.20.1330.10 45 173 3.7E-74 T 14-10-2018 VV1_1923 7b22bec905938563fa23dbaef3674764 377 Pfam PF07196 Flagellin hook IN motif 204 246 3.3E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV1_1923 7b22bec905938563fa23dbaef3674764 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.8E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VV1_1923 7b22bec905938563fa23dbaef3674764 377 PRINTS PR00207 Flagellin signature 37 54 3.0E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_1923 7b22bec905938563fa23dbaef3674764 377 PRINTS PR00207 Flagellin signature 76 95 3.0E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV1_1923 7b22bec905938563fa23dbaef3674764 377 PRINTS PR00207 Flagellin signature 111 134 3.0E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VV2_0203 e218adfed8f5ad8d3b899885123da0ab 270 Gene3D G3DSA:3.40.190.10 36 264 3.7E-16 T 14-10-2018 VV2_0203 e218adfed8f5ad8d3b899885123da0ab 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 268 4.3E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0203 e218adfed8f5ad8d3b899885123da0ab 270 Gene3D G3DSA:3.40.190.10 115 230 3.7E-16 T 14-10-2018 VV2_0203 e218adfed8f5ad8d3b899885123da0ab 270 SUPERFAMILY SSF53850 31 269 2.07E-25 T 14-10-2018 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 SUPERFAMILY SSF51316 240 379 6.8E-60 T 14-10-2018 IPR011057 Mss4-like superfamily VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 Pfam PF01625 Peptide methionine sulfoxide reductase 44 194 1.5E-55 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 Gene3D G3DSA:3.30.1060.10 18 202 5.0E-61 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 238 364 35.198 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 Gene3D G3DSA:2.170.150.20 234 380 1.4E-56 T 14-10-2018 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 193 1.2E-49 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 240 372 6.0E-61 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 Pfam PF01641 SelR domain 244 363 2.0E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 41 200 33.879 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV2_1649 1419df8cb2f4f9389df7bae06051bef3 380 SUPERFAMILY SSF55068 33 206 1.12E-68 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 6.2E-40 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 4.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 4.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 4.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 4.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 4.1E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF47323 642 898 2.8E-67 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:1.10.287.380 877 949 1.5E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.073 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:3.90.740.10 197 357 1.3E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.3E-226 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF46589 884 948 6.8E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF50677 191 365 1.44E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:3.40.50.620 358 577 1.5E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:3.40.50.620 2 196 2.6E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1474 66f3a36558df75918ffb862c58047d5e 951 SUPERFAMILY SSF52374 1 641 1.99E-135 T 14-10-2018 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 944 3.4E-19 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 Gene3D G3DSA:1.10.730.10 578 818 4.5E-71 T 14-10-2018 VV1_1474 66f3a36558df75918ffb862c58047d5e 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 6.4E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 Gene3D G3DSA:3.40.50.720 155 288 1.2E-116 T 14-10-2018 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 SUPERFAMILY SSF50129 3 175 1.13E-51 T 14-10-2018 IPR011032 GroES-like superfamily VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 3.3E-180 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 SUPERFAMILY SSF51735 143 307 8.02E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 Gene3D G3DSA:3.90.180.10 22 330 1.2E-116 T 14-10-2018 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.335 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 SMART SM00829 14 340 6.2E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VV2_1485 9a883ca4143ba23ef58b470d5780a88b 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 1.0E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VV1_0676 59b3cc1ef414985a46a8756da0c4bc49 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 670 2.5E-78 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV1_0676 59b3cc1ef414985a46a8756da0c4bc49 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 852 2.8E-68 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 VV1_0676 59b3cc1ef414985a46a8756da0c4bc49 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 731 1.7E-213 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VV2_0473 70ded357683860344b4a69841693f1fd 321 SMART SM00893 8 194 2.2E-31 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VV2_0473 70ded357683860344b4a69841693f1fd 321 Pfam PF01012 Electron transfer flavoprotein domain 8 180 2.1E-43 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VV2_0473 70ded357683860344b4a69841693f1fd 321 Gene3D G3DSA:3.40.50.620 7 194 3.1E-47 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV2_0473 70ded357683860344b4a69841693f1fd 321 SUPERFAMILY SSF52402 7 175 1.19E-45 T 14-10-2018 VV2_0473 70ded357683860344b4a69841693f1fd 321 SUPERFAMILY SSF52467 199 320 5.54E-50 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV2_0473 70ded357683860344b4a69841693f1fd 321 Gene3D G3DSA:3.40.50.1220 196 321 2.9E-58 T 14-10-2018 VV2_0473 70ded357683860344b4a69841693f1fd 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 8.6E-37 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VV2_0473 70ded357683860344b4a69841693f1fd 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 VV2_0473 70ded357683860344b4a69841693f1fd 321 PIRSF PIRSF000089 4 321 4.8E-113 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VV1_0780 5b9be3177e4af38c3a03ba3cd598d551 379 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 10 377 4.3E-164 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 VV1_0780 5b9be3177e4af38c3a03ba3cd598d551 379 SUPERFAMILY SSF53756 8 378 2.08E-139 T 14-10-2018 VV1_0780 5b9be3177e4af38c3a03ba3cd598d551 379 Gene3D G3DSA:3.40.50.2000 195 364 1.3E-155 T 14-10-2018 VV1_0780 5b9be3177e4af38c3a03ba3cd598d551 379 Gene3D G3DSA:3.40.50.2000 10 375 1.3E-155 T 14-10-2018 VV1_0780 5b9be3177e4af38c3a03ba3cd598d551 379 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 30 377 8.8E-125 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_2711 9da0105bf076d50d8efdcbd37e9d0067 90 Pfam PF00708 Acylphosphatase 7 89 9.6E-24 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV1_2711 9da0105bf076d50d8efdcbd37e9d0067 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV1_2711 9da0105bf076d50d8efdcbd37e9d0067 90 Gene3D G3DSA:3.30.70.100 1 90 1.2E-29 T 14-10-2018 VV1_2711 9da0105bf076d50d8efdcbd37e9d0067 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV1_2711 9da0105bf076d50d8efdcbd37e9d0067 90 SUPERFAMILY SSF54975 5 89 8.07E-27 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VV1_1379 f0095ac62320b40e7416ecfd9878de1c 196 PIRSF PIRSF016482 1 196 1.6E-66 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VV1_1379 f0095ac62320b40e7416ecfd9878de1c 196 Pfam PF04350 Pilus assembly protein, PilO 47 189 8.6E-46 T 14-10-2018 IPR007445 Pilus assembly protein, PilO VV1_1379 f0095ac62320b40e7416ecfd9878de1c 196 Gene3D G3DSA:3.30.70.60 92 196 6.0E-26 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF03462 PCRF domain 13 205 8.6E-76 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 SMART SM00937 67 180 3.4E-67 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.9E-170 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:1.20.58.410 3 104 1.3E-8 T 14-10-2018 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:3.30.70.1660 115 343 2.2E-95 T 14-10-2018 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 Gene3D G3DSA:3.30.160.20 212 293 2.2E-95 T 14-10-2018 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 Pfam PF00472 RF-1 domain 218 323 5.2E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 SUPERFAMILY SSF75620 12 355 4.84E-137 T 14-10-2018 VV1_0253 10730ca2cb1a85e0814ea4b0fc3a007a 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.924 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VV1_0051 e96415d48f0520046af680ac924fbef9 123 SUPERFAMILY SSF54637 15 110 2.24E-16 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_0051 e96415d48f0520046af680ac924fbef9 123 PIRSF PIRSF030962 1 123 1.1E-64 T 14-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_0051 e96415d48f0520046af680ac924fbef9 123 Gene3D G3DSA:3.10.129.10 3 123 4.0E-34 T 14-10-2018 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 318 2.6E-68 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 Gene3D G3DSA:1.10.10.10 2 65 5.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1198 951d8e972a59e9398646e7d849323d4f 322 Gene3D G3DSA:2.30.30.100 272 322 8.3E-15 T 14-10-2018 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 SUPERFAMILY SSF55681 78 269 1.39E-60 T 14-10-2018 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 208 3.3E-21 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 Gene3D G3DSA:3.30.930.10 67 271 1.2E-68 T 14-10-2018 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 Pfam PF02237 Biotin protein ligase C terminal domain 274 318 4.2E-9 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.501 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VV1_1198 951d8e972a59e9398646e7d849323d4f 322 SUPERFAMILY SSF46785 9 61 8.37E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1198 951d8e972a59e9398646e7d849323d4f 322 SUPERFAMILY SSF50037 273 318 5.95E-9 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VV1_1198 951d8e972a59e9398646e7d849323d4f 322 Pfam PF08279 HTH domain 9 60 9.0E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 SUPERFAMILY SSF46894 155 222 4.42E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 SMART SM00421 160 217 5.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 217 4.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 Gene3D G3DSA:3.30.450.20 14 132 3.6E-10 T 14-10-2018 VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 Gene3D G3DSA:1.10.10.10 154 222 5.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 SUPERFAMILY SSF55785 16 127 1.56E-8 T 14-10-2018 IPR035965 PAS domain superfamily VV2_1121 fbe6f8279d1d8e36403680d09dd89523 246 Pfam PF08448 PAS fold 17 128 1.1E-23 T 14-10-2018 IPR013656 PAS fold-4 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 Gene3D G3DSA:3.30.1130.10 85 217 1.2E-51 T 14-10-2018 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 3.2E-79 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 SUPERFAMILY SSF55620 9 216 4.37E-74 T 14-10-2018 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 Gene3D G3DSA:1.10.286.10 1 84 2.1E-37 T 14-10-2018 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 Pfam PF01227 GTP cyclohydrolase I 38 215 4.5E-64 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VV2_0543 ed3bde2a69dd46226fec60c030b26566 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.797 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 SUPERFAMILY SSF56931 14 255 1.26E-71 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 Gene3D G3DSA:2.40.230.10 9 255 1.2E-67 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 Pfam PF02253 Phospholipase A1 19 252 2.3E-60 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 54 71 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 220 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 225 245 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 123 137 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 138 156 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV1_2799 e3c1bbc8d20bdea77c688c0b2aeb23d1 255 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 188 4.1E-26 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VV2_0839 a15bee330da47be60f2cf56e4635611b 109 SUPERFAMILY SSF48600 5 97 2.44E-26 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV2_0839 a15bee330da47be60f2cf56e4635611b 109 Pfam PF01817 Chorismate mutase type II 17 93 9.0E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV2_0839 a15bee330da47be60f2cf56e4635611b 109 SMART SM00830 17 96 8.7E-25 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV2_0839 a15bee330da47be60f2cf56e4635611b 109 PIRSF PIRSF029775 1 104 1.8E-43 T 14-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV2_0839 a15bee330da47be60f2cf56e4635611b 109 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 13 93 4.7E-26 T 14-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV2_0839 a15bee330da47be60f2cf56e4635611b 109 Gene3D G3DSA:1.20.59.10 4 104 1.5E-36 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VV1_1430 bffe5fdca954a77788e5577deb88e025 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.881 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VV1_1430 bffe5fdca954a77788e5577deb88e025 179 Gene3D G3DSA:2.40.50.140 2 147 7.6E-51 T 14-10-2018 VV1_1430 bffe5fdca954a77788e5577deb88e025 179 Pfam PF00436 Single-strand binding protein family 6 105 1.3E-42 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VV1_1430 bffe5fdca954a77788e5577deb88e025 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 2.3E-62 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VV1_1430 bffe5fdca954a77788e5577deb88e025 179 SUPERFAMILY SSF50249 4 179 1.3E-60 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2106 8a9b20b0197e5f64c4857f26964286d3 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.5E-98 T 14-10-2018 VV1_2106 8a9b20b0197e5f64c4857f26964286d3 268 SUPERFAMILY SSF56219 1 268 4.71E-85 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV1_2106 8a9b20b0197e5f64c4857f26964286d3 268 Gene3D G3DSA:3.60.10.10 1 268 2.7E-78 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV1_2106 8a9b20b0197e5f64c4857f26964286d3 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VV1_2106 8a9b20b0197e5f64c4857f26964286d3 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 260 1.5E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV1_2106 8a9b20b0197e5f64c4857f26964286d3 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 VV1_2106 8a9b20b0197e5f64c4857f26964286d3 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 5.3E-86 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 17 64 1.1E-17 T 14-10-2018 VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 SUPERFAMILY SSF46785 16 76 3.86E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 SUPERFAMILY SSF54909 79 161 1.07E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 35 61 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 Gene3D G3DSA:3.30.70.920 71 153 1.3E-20 T 14-10-2018 VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 Gene3D G3DSA:1.10.10.10 7 70 2.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 44 7.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 44 63 7.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 33 7.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 Pfam PF01037 Lrp/AsnC ligand binding domain 83 156 6.8E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV2_1256 567f4a61402442ac7ddcf7c8be7a125c 162 SMART SM00344 17 126 3.4E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV2_0271 3971d4339a7bbb951b979c15aeb758ea 311 SUPERFAMILY SSF50891 185 295 3.0E-9 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV2_0271 3971d4339a7bbb951b979c15aeb758ea 311 SMART SM00797 27 308 4.3E-129 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VV2_0271 3971d4339a7bbb951b979c15aeb758ea 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 29 291 4.3E-80 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VV2_0271 3971d4339a7bbb951b979c15aeb758ea 311 Gene3D G3DSA:2.40.100.10 182 309 6.5E-41 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV2_0271 3971d4339a7bbb951b979c15aeb758ea 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 6 292 9.6E-77 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 12 888 17.942 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 Pfam PF00311 Phosphoenolpyruvate carboxylase 140 888 2.4E-288 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 SUPERFAMILY SSF51621 17 888 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 Gene3D G3DSA:1.20.1440.90 284 398 5.7E-27 T 14-10-2018 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 546 558 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 586 615 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 395 415 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 197 213 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 256 271 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 718 744 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 144 157 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 544 564 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_1369 b078fcea0a5d7dca3ab2accd295b1d4b 888 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 145 156 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VV1_2565 1be2bc65d65fc681396e7d672b209bed 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 7.4E-42 T 14-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VV1_0211 263f3b2d965a996a8360878543740102 574 SUPERFAMILY SSF51621 249 549 4.45E-110 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_0211 263f3b2d965a996a8360878543740102 574 PIRSF PIRSF000732 1 574 1.1E-219 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VV1_0211 263f3b2d965a996a8360878543740102 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 4.1E-32 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV1_0211 263f3b2d965a996a8360878543740102 574 SUPERFAMILY SSF52009 125 243 9.29E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VV1_0211 263f3b2d965a996a8360878543740102 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.2E-247 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VV1_0211 263f3b2d965a996a8360878543740102 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 5.4E-124 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VV1_0211 263f3b2d965a996a8360878543740102 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VV1_0211 263f3b2d965a996a8360878543740102 574 SUPERFAMILY SSF47831 24 143 9.02E-33 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VV1_0211 263f3b2d965a996a8360878543740102 574 Gene3D G3DSA:3.50.30.10 4 233 1.2E-80 T 14-10-2018 VV1_0211 263f3b2d965a996a8360878543740102 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.5E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV1_0211 263f3b2d965a996a8360878543740102 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 14-10-2018 VV1_0211 263f3b2d965a996a8360878543740102 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 14-10-2018 VV1_0211 263f3b2d965a996a8360878543740102 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 14-10-2018 VV1_0211 263f3b2d965a996a8360878543740102 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 14-10-2018 VV1_0211 263f3b2d965a996a8360878543740102 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VV1_0211 263f3b2d965a996a8360878543740102 574 Gene3D G3DSA:3.20.20.60 234 574 1.6E-125 T 14-10-2018 VV1_0211 263f3b2d965a996a8360878543740102 574 Gene3D G3DSA:1.10.274.10 21 146 1.2E-80 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VV2_1160 4f34ee92624a7196914a5465e7a74500 390 SMART SM00283 95 363 6.2E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1160 4f34ee92624a7196914a5465e7a74500 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 314 1.5E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1160 4f34ee92624a7196914a5465e7a74500 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 222 251 1.0E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1160 4f34ee92624a7196914a5465e7a74500 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 220 1.0E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1160 4f34ee92624a7196914a5465e7a74500 390 SUPERFAMILY SSF58104 101 345 1.11E-36 T 14-10-2018 VV2_1160 4f34ee92624a7196914a5465e7a74500 390 Gene3D G3DSA:1.10.287.950 86 371 5.3E-34 T 14-10-2018 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 Pfam PF03167 Uracil DNA glycosylase superfamily 53 207 2.7E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 Gene3D G3DSA:3.40.470.10 1 225 4.9E-105 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 6.9E-88 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 SMART SM00986 49 210 6.9E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 SMART SM00987 49 210 6.9E-41 T 14-10-2018 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 SUPERFAMILY SSF52141 5 222 2.05E-96 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_0540 54823b5d5c96c26e3782e287e4800203 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.209 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VV1_0430 4513327b545e4f904be7458f522e3930 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_0430 4513327b545e4f904be7458f522e3930 141 Gene3D G3DSA:3.30.70.141 1 141 1.1E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 SUPERFAMILY SSF54919 1 140 1.02E-60 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 SMART SM00562 3 140 4.5E-91 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.783 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.7E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV1_0430 4513327b545e4f904be7458f522e3930 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.5E-58 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VV2_0507 5af9836ccf17021a7454d38be63f70b0 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 1.6E-41 T 14-10-2018 VV2_0507 5af9836ccf17021a7454d38be63f70b0 343 SMART SM00829 20 337 6.7E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VV2_0507 5af9836ccf17021a7454d38be63f70b0 343 Gene3D G3DSA:3.40.50.720 128 309 2.1E-131 T 14-10-2018 VV2_0507 5af9836ccf17021a7454d38be63f70b0 343 Gene3D G3DSA:3.90.180.10 17 337 2.1E-131 T 14-10-2018 VV2_0507 5af9836ccf17021a7454d38be63f70b0 343 SUPERFAMILY SSF50129 5 144 1.96E-42 T 14-10-2018 IPR011032 GroES-like superfamily VV2_0507 5af9836ccf17021a7454d38be63f70b0 343 Pfam PF00107 Zinc-binding dehydrogenase 159 287 3.5E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VV2_0507 5af9836ccf17021a7454d38be63f70b0 343 SUPERFAMILY SSF51735 124 304 2.18E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 SUPERFAMILY SSF47384 412 482 4.71E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 SMART SM00387 542 654 3.8E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 Gene3D G3DSA:1.10.287.130 393 494 1.5E-18 T 14-10-2018 VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 Gene3D G3DSA:3.30.565.10 499 656 2.4E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 631 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 653 5.8E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 62 168 2.1E-32 T 14-10-2018 IPR033414 Periplasmic sensor domain VV2_0464 be61b032ee747b1d987eb8f7f283b80c 665 SUPERFAMILY SSF55874 489 652 5.24E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 SMART SM00344 1 111 1.6E-20 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 Pfam PF01037 Lrp/AsnC ligand binding domain 76 140 5.6E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 Gene3D G3DSA:3.30.70.920 54 149 2.8E-13 T 14-10-2018 VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 Gene3D G3DSA:1.10.10.10 1 52 6.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 7.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 7.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 7.8E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 SUPERFAMILY SSF46785 1 56 3.18E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0773 86b6ccf3f628bfc8e4dedb7ccd7bd531 149 SUPERFAMILY SSF54909 76 146 1.74E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 149 2.0E-78 T 14-10-2018 VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 Pfam PF01220 Dehydroquinase class II 6 142 4.9E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 SUPERFAMILY SSF52304 4 145 9.16E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 144 1.2E-63 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 Gene3D G3DSA:3.40.50.9100 1 149 8.9E-66 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.151 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VV1_1236 94aca3ce8ddddda4824c0db92fb1331e 149 PIRSF PIRSF001399 3 149 3.0E-58 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VV1_1547 64988a8721523ba729331b955ac05639 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.4E-58 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VV1_1547 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF75445 127 198 5.49E-24 T 14-10-2018 VV1_1547 64988a8721523ba729331b955ac05639 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.919 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VV1_1547 64988a8721523ba729331b955ac05639 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.3E-68 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VV1_1547 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.40.50.1360 7 207 2.7E-81 T 14-10-2018 VV1_1547 64988a8721523ba729331b955ac05639 218 SUPERFAMILY SSF100950 1 146 1.49E-46 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV1_1547 64988a8721523ba729331b955ac05639 218 Gene3D G3DSA:3.30.70.260 125 196 2.7E-81 T 14-10-2018 VV1_0336 79202ac11e3c0feaffcd04c755803f87 352 SUPERFAMILY SSF53187 20 318 4.3E-76 T 14-10-2018 VV1_0336 79202ac11e3c0feaffcd04c755803f87 352 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 7.6E-72 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VV1_0336 79202ac11e3c0feaffcd04c755803f87 352 PIRSF PIRSF039012 4 325 1.3E-90 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VV1_0336 79202ac11e3c0feaffcd04c755803f87 352 Gene3D G3DSA:3.40.630.10 16 320 1.4E-91 T 14-10-2018 VV1_1003 2761308d1823e155e0b12538d59559ac 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1003 2761308d1823e155e0b12538d59559ac 245 Pfam PF00005 ABC transporter 17 168 5.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1003 2761308d1823e155e0b12538d59559ac 245 Gene3D G3DSA:3.40.50.300 1 244 1.3E-77 T 14-10-2018 VV1_1003 2761308d1823e155e0b12538d59559ac 245 PIRSF PIRSF039085 1 244 5.5E-107 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VV1_1003 2761308d1823e155e0b12538d59559ac 245 SUPERFAMILY SSF52540 1 238 7.45E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1003 2761308d1823e155e0b12538d59559ac 245 SMART SM00382 26 216 4.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Gene3D G3DSA:1.10.8.60 759 852 4.0E-10 T 14-10-2018 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Gene3D G3DSA:3.40.50.300 159 351 4.8E-61 T 14-10-2018 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 843 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 SMART SM01086 759 851 4.5E-6 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 587 754 2.4E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 759 832 5.6E-10 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Gene3D G3DSA:3.40.50.300 353 534 1.8E-41 T 14-10-2018 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 SMART SM00382 207 352 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 SMART SM00382 587 747 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Gene3D G3DSA:1.10.1780.10 1 158 4.9E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 SUPERFAMILY SSF52540 168 491 1.17E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 665 683 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 636 654 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 698 712 2.7E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 325 2.4E-9 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 SUPERFAMILY SSF52540 536 843 7.09E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 Gene3D G3DSA:3.40.50.300 540 756 8.1E-66 T 14-10-2018 VV2_0430 897b446fca5fa1d1122fb6a78046f9d0 854 SUPERFAMILY SSF81923 11 128 5.69E-15 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VV1_2491 30051b0dd6774f7452a29ba804e1c2f9 146 Pfam PF00583 Acetyltransferase (GNAT) family 38 126 3.3E-12 T 14-10-2018 IPR000182 GNAT domain VV1_2491 30051b0dd6774f7452a29ba804e1c2f9 146 Gene3D G3DSA:3.40.630.30 3 146 1.3E-18 T 14-10-2018 VV1_2491 30051b0dd6774f7452a29ba804e1c2f9 146 SUPERFAMILY SSF55729 3 134 5.13E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 SUPERFAMILY SSF47648 2 67 5.76E-18 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 1.6E-103 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 Gene3D G3DSA:1.20.970.10 10 183 9.5E-123 T 14-10-2018 VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 5.5E-128 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 SUPERFAMILY SSF52418 70 329 1.24E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 Gene3D G3DSA:3.40.1030.10 67 321 9.5E-123 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 6.1E-16 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV1_3066 4ca7747099d9e7e3cf21c92280c56c78 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.519 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VV1_2807 925f74959cf24a4628e0b91b3619a87c 307 Pfam PF10977 Protein of unknown function (DUF2797) 71 303 1.8E-95 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 5.3E-62 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.3E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 3.6E-125 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF52374 340 471 2.61E-23 T 14-10-2018 VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.1190.20 6 310 7.2E-112 T 14-10-2018 IPR029056 Ribokinase-like VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.4E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 Gene3D G3DSA:3.40.50.620 324 474 2.4E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 SUPERFAMILY SSF53613 12 304 5.61E-58 T 14-10-2018 IPR029056 Ribokinase-like VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.696 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VV1_0613 b40625423efb081d2dc1a20c18bf83d1 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV2_0222 62839b21ae02d76bbacb522fc07bdef7 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 2.7E-26 T 14-10-2018 VV2_0222 62839b21ae02d76bbacb522fc07bdef7 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 188 2.2E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_0222 62839b21ae02d76bbacb522fc07bdef7 222 SUPERFAMILY SSF56784 5 218 9.32E-45 T 14-10-2018 IPR036412 HAD-like superfamily VV2_0222 62839b21ae02d76bbacb522fc07bdef7 222 Gene3D G3DSA:3.40.50.1000 9 203 5.7E-43 T 14-10-2018 IPR023214 HAD superfamily VV2_0222 62839b21ae02d76bbacb522fc07bdef7 222 Gene3D G3DSA:1.10.150.240 21 88 5.7E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VV1_1585 00a48178de768a94a08f025c39285bb6 255 Pfam PF01975 Survival protein SurE 11 189 2.0E-61 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VV1_1585 00a48178de768a94a08f025c39285bb6 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 10 240 2.0E-75 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VV1_1585 00a48178de768a94a08f025c39285bb6 255 Gene3D G3DSA:3.40.1210.10 1 255 4.7E-97 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VV1_1585 00a48178de768a94a08f025c39285bb6 255 SUPERFAMILY SSF64167 9 253 9.55E-87 T 14-10-2018 VV1_1585 00a48178de768a94a08f025c39285bb6 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 9 255 41.127 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VV1_2367 bec38fa46ec1840819213841f6069407 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 76 259 1.9E-65 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VV1_2367 bec38fa46ec1840819213841f6069407 261 Gene3D G3DSA:2.50.20.10 23 259 3.4E-93 T 14-10-2018 VV1_2367 bec38fa46ec1840819213841f6069407 261 SUPERFAMILY SSF89392 100 202 4.71E-6 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV1_1880 f051689420d7760d00afc5a1b50c20e7 284 Gene3D G3DSA:3.60.10.10 61 283 9.1E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV1_1880 f051689420d7760d00afc5a1b50c20e7 284 SUPERFAMILY SSF56219 60 279 1.7E-24 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV1_1880 f051689420d7760d00afc5a1b50c20e7 284 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 59.72 T 14-10-2018 IPR022958 Uncharacterised protein family UPF0294 VV1_1880 f051689420d7760d00afc5a1b50c20e7 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 1.6E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV2_0335 4494fc7d69d2e97113819cd37969e9ef 770 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 580 735 2.9E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0335 4494fc7d69d2e97113819cd37969e9ef 770 Gene3D G3DSA:1.10.287.950 440 770 3.0E-72 T 14-10-2018 VV2_0335 4494fc7d69d2e97113819cd37969e9ef 770 SUPERFAMILY SSF58104 461 770 3.14E-72 T 14-10-2018 VV2_0335 4494fc7d69d2e97113819cd37969e9ef 770 Pfam PF02743 Cache domain 37 397 5.3E-12 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_0335 4494fc7d69d2e97113819cd37969e9ef 770 SMART SM00283 508 769 2.2E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0335 4494fc7d69d2e97113819cd37969e9ef 770 SMART SM00304 440 493 4.7E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0266 6760cb77de9de97f0dce8078a71e78fc 200 Gene3D G3DSA:3.40.50.1110 20 200 3.5E-64 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VV2_0266 6760cb77de9de97f0dce8078a71e78fc 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VV2_0266 6760cb77de9de97f0dce8078a71e78fc 200 SUPERFAMILY SSF52266 22 199 3.21E-50 T 14-10-2018 VV2_0266 6760cb77de9de97f0dce8078a71e78fc 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 183 3.8E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 Gene3D G3DSA:3.30.379.10 132 256 1.6E-19 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 Gene3D G3DSA:3.20.20.80 258 636 2.0E-135 T 14-10-2018 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 SUPERFAMILY SSF51445 260 620 1.81E-126 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 3.7E-49 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 137 256 6.7E-15 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 5.2E-121 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VV1_1666 6dd4a9f74ada17fadfd374e63385ce7a 639 SUPERFAMILY SSF55545 125 259 7.33E-24 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VV1_1722 00e783e7eeb4d4440b3c4cf7230799cd 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV1_1722 00e783e7eeb4d4440b3c4cf7230799cd 265 PIRSF PIRSF005902 1 265 5.1E-60 T 14-10-2018 IPR001130 TatD family GO:0016788 VV1_1722 00e783e7eeb4d4440b3c4cf7230799cd 265 SUPERFAMILY SSF51556 1 263 7.95E-69 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_1722 00e783e7eeb4d4440b3c4cf7230799cd 265 Gene3D G3DSA:3.20.20.140 1 264 5.3E-74 T 14-10-2018 VV1_1722 00e783e7eeb4d4440b3c4cf7230799cd 265 Pfam PF01026 TatD related DNase 4 262 2.3E-56 T 14-10-2018 IPR001130 TatD family GO:0016788 VV1_1722 00e783e7eeb4d4440b3c4cf7230799cd 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 198 214 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VV1_0993 b909f4a36df55ebbf06823a229867f10 753 SUPERFAMILY SSF141868 503 742 2.35E-87 T 14-10-2018 IPR035919 EAL domain superfamily VV1_0993 b909f4a36df55ebbf06823a229867f10 753 Gene3D G3DSA:3.30.70.270 321 499 1.9E-51 T 14-10-2018 VV1_0993 b909f4a36df55ebbf06823a229867f10 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 327 483 6.5E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_0993 b909f4a36df55ebbf06823a229867f10 753 Gene3D G3DSA:3.20.20.450 500 746 9.0E-94 T 14-10-2018 IPR035919 EAL domain superfamily VV1_0993 b909f4a36df55ebbf06823a229867f10 753 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 323 485 1.9E-38 T 14-10-2018 IPR000160 GGDEF domain VV1_0993 b909f4a36df55ebbf06823a229867f10 753 SMART SM00052 497 740 5.6E-109 T 14-10-2018 IPR001633 EAL domain VV1_0993 b909f4a36df55ebbf06823a229867f10 753 Pfam PF00563 EAL domain 503 735 1.4E-73 T 14-10-2018 IPR001633 EAL domain VV1_0993 b909f4a36df55ebbf06823a229867f10 753 SUPERFAMILY SSF55073 332 488 6.75E-46 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_0993 b909f4a36df55ebbf06823a229867f10 753 Pfam PF03924 CHASE domain 133 235 1.6E-15 T 14-10-2018 IPR006189 CHASE domain VV1_0993 b909f4a36df55ebbf06823a229867f10 753 SMART SM00267 316 487 2.5E-51 T 14-10-2018 IPR000160 GGDEF domain VV1_0993 b909f4a36df55ebbf06823a229867f10 753 SMART SM01079 71 248 2.9E-40 T 14-10-2018 IPR006189 CHASE domain VV1_2314 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Gene3D G3DSA:3.40.190.10 16 110 4.3E-5 T 14-10-2018 VV1_2314 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 SUPERFAMILY SSF53850 20 245 3.21E-27 T 14-10-2018 VV1_2314 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Gene3D G3DSA:3.40.190.10 193 311 1.9E-8 T 14-10-2018 VV1_2314 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Gene3D G3DSA:3.40.190.10 111 192 4.6E-10 T 14-10-2018 VV1_2314 0572a186b69ddd2b07bbbfb1cb4b8f4e 311 Pfam PF09084 NMT1/THI5 like 31 239 2.1E-18 T 14-10-2018 IPR015168 SsuA/THI5-like VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Gene3D G3DSA:3.20.20.80 758 782 3.6E-13 T 14-10-2018 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 SUPERFAMILY SSF54556 628 751 7.63E-14 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 ProSitePatterns PS01095 Chitinases family 18 active site. 470 478 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 SMART SM00495 37 83 7.0E-16 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 SMART SM00495 1012 1057 0.014 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 SUPERFAMILY SSF51445 315 785 2.28E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Gene3D G3DSA:3.20.20.80 300 651 2.6E-81 T 14-10-2018 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Gene3D G3DSA:2.60.40.10 97 189 6.3E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Gene3D G3DSA:2.60.40.10 192 283 6.2E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 SMART SM00636 321 781 3.0E-121 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Gene3D G3DSA:3.10.50.10 694 757 3.6E-13 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 SUPERFAMILY SSF51055 22 87 1.1E-17 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Pfam PF06483 Chitinase C 809 974 3.3E-71 T 14-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Gene3D G3DSA:2.10.10.20 16 88 5.6E-15 T 14-10-2018 VV2_0213 f9dcdc116581c9399e82dbda7128ee96 1060 Pfam PF00704 Glycosyl hydrolases family 18 322 781 2.2E-85 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 Gene3D G3DSA:3.40.50.2300 145 369 1.6E-86 T 14-10-2018 VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 SUPERFAMILY SSF53822 29 371 1.21E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 Gene3D G3DSA:3.40.50.2300 32 356 1.6E-86 T 14-10-2018 VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 256 274 8.7E-13 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 VV2_0939 64d9393c6c6a3b2a0c63fce495e423fc 387 Pfam PF13458 Periplasmic binding protein 29 366 1.6E-71 T 14-10-2018 IPR028081 Leucine-binding protein domain VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 SUPERFAMILY SSF48256 4 428 5.89E-170 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.9E-135 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 Gene3D G3DSA:1.10.580.10 57 411 1.0E-150 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 3.6E-239 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 Gene3D G3DSA:2.20.28.60 1 50 1.8E-26 T 14-10-2018 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 PIRSF PIRSF001369 38 429 1.0E-174 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VV1_0162 de01f0c2de3bf73eef77eeca0d63925c 429 Gene3D G3DSA:1.10.230.10 268 376 1.0E-150 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VV1_1176 c89844ea40f8890c214f1f3212a91ad1 148 SMART SM00360 62 134 1.1E-20 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VV1_1176 c89844ea40f8890c214f1f3212a91ad1 148 SUPERFAMILY SSF54928 44 139 8.46E-27 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VV1_1176 c89844ea40f8890c214f1f3212a91ad1 148 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 132 7.8E-18 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VV1_1176 c89844ea40f8890c214f1f3212a91ad1 148 Gene3D G3DSA:3.30.70.330 47 144 4.1E-26 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VV2_0900 895652e6ef748da6d988153aaea29e22 249 Pfam PF07670 Nucleoside recognition 85 179 2.4E-10 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 7.0E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 5.5E-22 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:3.50.30.10 173 399 3.0E-56 T 14-10-2018 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:1.10.274.10 190 314 3.0E-56 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF51621 422 713 6.28E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 SMART SM00065 17 163 1.6E-22 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 1.0E-95 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF47831 203 311 2.62E-26 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:3.20.20.60 400 739 6.1E-105 T 14-10-2018 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Gene3D G3DSA:3.30.450.40 1 161 6.2E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF52009 293 412 7.72E-26 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 Pfam PF01590 GAF domain 17 153 1.1E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 SUPERFAMILY SSF55781 2 158 1.79E-33 T 14-10-2018 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 172 730 4.9E-134 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 7.1E-23 T 14-10-2018 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 7.1E-23 T 14-10-2018 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.1E-23 T 14-10-2018 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 7.1E-23 T 14-10-2018 VV1_0519 84ee5620193ea5a31e81a29599f17e26 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 Gene3D G3DSA:3.40.50.300 142 282 1.3E-11 T 14-10-2018 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 Pfam PF14532 Sigma-54 interaction domain 145 245 9.1E-6 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 SUPERFAMILY SSF52172 5 186 5.27E-39 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 SUPERFAMILY SSF46689 318 402 1.39E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 Pfam PF02954 Bacterial regulatory protein, Fis family 361 399 1.1E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 Gene3D G3DSA:3.40.50.2300 1 136 2.6E-36 T 14-10-2018 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 Gene3D G3DSA:1.10.10.60 349 404 5.6E-9 T 14-10-2018 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 SMART SM00448 3 114 1.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 Gene3D G3DSA:1.10.8.60 283 348 5.1E-12 T 14-10-2018 VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 SUPERFAMILY SSF52540 144 335 9.02E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1124 20a07a29deb7bd6cfef78fad2c07494d 409 Pfam PF00072 Response regulator receiver domain 6 115 8.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2674 da834980ff35f0f877ddd8123e6485eb 409 Pfam PF13641 Glycosyltransferase like family 2 66 286 5.6E-13 T 14-10-2018 VV1_2674 da834980ff35f0f877ddd8123e6485eb 409 SUPERFAMILY SSF53448 56 330 2.72E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2674 da834980ff35f0f877ddd8123e6485eb 409 Gene3D G3DSA:3.90.550.10 33 294 3.9E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0289 75abf55868cc03fd4ff3c4fa75286306 478 Gene3D G3DSA:3.30.1360.60 6 82 2.5E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV1_0289 75abf55868cc03fd4ff3c4fa75286306 478 SUPERFAMILY SSF55604 13 85 1.31E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV1_0289 75abf55868cc03fd4ff3c4fa75286306 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 34 115 7.3E-14 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV1_0289 75abf55868cc03fd4ff3c4fa75286306 478 Pfam PF02378 Phosphotransferase system, EIIC 116 408 1.4E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV1_0289 75abf55868cc03fd4ff3c4fa75286306 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 25 42 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV1_0289 75abf55868cc03fd4ff3c4fa75286306 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 11 465 3.4E-203 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 VV1_0289 75abf55868cc03fd4ff3c4fa75286306 478 Pfam PF00367 phosphotransferase system, EIIB 15 47 5.5E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 Pfam PF03129 Anticodon binding domain 329 420 8.9E-11 T 14-10-2018 IPR004154 Anticodon-binding VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 SUPERFAMILY SSF52954 327 422 1.8E-26 T 14-10-2018 VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 Gene3D G3DSA:3.40.50.800 326 422 1.6E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 SUPERFAMILY SSF55681 5 320 9.36E-105 T 14-10-2018 VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 9.5E-44 T 14-10-2018 VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 5.1E-157 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.524 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 PIRSF PIRSF001549 2 422 8.9E-125 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VV1_0426 c832dc0b66d854aacb73813c2c5dd754 422 Gene3D G3DSA:3.30.930.10 2 323 3.1E-118 T 14-10-2018 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.1150.10 425 594 8.0E-70 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF55904 568 708 1.44E-42 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.90.100.10 595 711 4.6E-45 T 14-10-2018 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.40.50.2300 1 129 4.2E-53 T 14-10-2018 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.6E-44 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 2.1E-29 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 Gene3D G3DSA:3.40.640.10 130 424 1.7E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 PIRSF PIRSF009393 1 711 1.2E-287 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VV1_2060 26cb5e756dfb885468defd4049d0c820 711 SUPERFAMILY SSF53383 130 562 7.24E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2060 26cb5e756dfb885468defd4049d0c820 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-186 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VV2_0105 165cc5c3bb8ab60115a2c0d638160d8c 197 SMART SM01266 1 52 4.4E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VV2_0105 165cc5c3bb8ab60115a2c0d638160d8c 197 Gene3D G3DSA:2.160.10.10 1 194 2.8E-66 T 14-10-2018 VV2_0105 165cc5c3bb8ab60115a2c0d638160d8c 197 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV2_0105 165cc5c3bb8ab60115a2c0d638160d8c 197 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 158 2.9E-12 T 14-10-2018 IPR001451 Hexapeptide repeat VV2_0105 165cc5c3bb8ab60115a2c0d638160d8c 197 SUPERFAMILY SSF51161 1 188 4.3E-54 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV2_0105 165cc5c3bb8ab60115a2c0d638160d8c 197 Pfam PF12464 Maltose acetyltransferase 1 51 2.1E-10 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 SUPERFAMILY SSF46785 5 61 1.39E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 SUPERFAMILY SSF100950 75 234 1.67E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 SMART SM01134 74 232 2.2E-42 T 14-10-2018 VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 SMART SM00420 6 58 3.6E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 Gene3D G3DSA:1.10.10.10 1 59 6.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.1E-39 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV2_1079 e1f01a2fdf68d1c1400abdda63322b1e 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 3.6E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV2_0652 ee5c122c1fd29d0ed110286becc73c0d 245 SUPERFAMILY SSF47240 60 205 3.78E-6 T 14-10-2018 IPR009078 Ferritin-like superfamily VV1_0302 403604cabfdd875c73dbddf32f713de5 249 SMART SM00892 40 232 7.6E-65 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VV1_0302 403604cabfdd875c73dbddf32f713de5 249 SMART SM00477 41 232 5.0E-63 T 14-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VV1_0302 403604cabfdd875c73dbddf32f713de5 249 Pfam PF01223 DNA/RNA non-specific endonuclease 24 231 7.5E-57 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VV1_0302 403604cabfdd875c73dbddf32f713de5 249 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 14-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 VV1_0302 403604cabfdd875c73dbddf32f713de5 249 SUPERFAMILY SSF54060 23 241 5.3E-70 T 14-10-2018 VV1_0302 403604cabfdd875c73dbddf32f713de5 249 Gene3D G3DSA:3.40.570.10 13 244 1.5E-73 T 14-10-2018 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 Gene3D G3DSA:3.30.420.150 114 291 5.3E-84 T 14-10-2018 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 Gene3D G3DSA:3.30.420.40 11 298 5.3E-84 T 14-10-2018 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 SUPERFAMILY SSF53067 134 305 9.99E-43 T 14-10-2018 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 PIRSF PIRSF001267 1 497 1.3E-178 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 3.7E-88 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 Gene3D G3DSA:1.10.3210.10 306 497 1.7E-47 T 14-10-2018 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 SUPERFAMILY SSF109604 309 495 1.1E-41 T 14-10-2018 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 SUPERFAMILY SSF53067 9 129 8.42E-37 T 14-10-2018 VV1_0940 92f94547239e6b0aefd10d732c65b10f 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 53.083 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 VV1_0198 388142c2f1a9bdcab614851421297a77 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 4.5E-72 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 VV1_0907 39b52185ca0e9799e45d260175caf8e5 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 5.6E-176 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VV1_0907 39b52185ca0e9799e45d260175caf8e5 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.997 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VV1_0907 39b52185ca0e9799e45d260175caf8e5 544 Pfam PF03109 ABC1 family 112 231 4.0E-36 T 14-10-2018 IPR004147 UbiB domain VV1_0907 39b52185ca0e9799e45d260175caf8e5 544 SUPERFAMILY SSF56112 94 436 1.57E-45 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV1_2608 08eec7e234798ed9def1dff02995b37b 310 SUPERFAMILY SSF52402 29 255 2.92E-56 T 14-10-2018 VV1_2608 08eec7e234798ed9def1dff02995b37b 310 Gene3D G3DSA:3.40.50.620 2 265 6.7E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_2608 08eec7e234798ed9def1dff02995b37b 310 PIRSF PIRSF004976 1 274 6.8E-76 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VV1_2608 08eec7e234798ed9def1dff02995b37b 310 Pfam PF01171 PP-loop family 43 203 3.4E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VV1_2608 08eec7e234798ed9def1dff02995b37b 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 270 57.674 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 PIRSF PIRSF006205 1 402 6.0E-153 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 9.2E-47 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 2.0E-39 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 SUPERFAMILY SSF51735 2 150 2.02E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1866 849092e96032af1f170c4a62a3bb6023 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 397 8.2E-163 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.853 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 Gene3D G3DSA:1.10.1740.10 312 401 1.2E-27 T 14-10-2018 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 SUPERFAMILY SSF69055 302 399 7.19E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 Gene3D G3DSA:3.40.50.720 1 150 2.3E-52 T 14-10-2018 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.2E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VV1_1866 849092e96032af1f170c4a62a3bb6023 402 SUPERFAMILY SSF55347 126 274 5.89E-63 T 14-10-2018 VV1_1337 a5cbda310e39f5e8722bb1da7385bf97 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.5E-72 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VV1_1337 a5cbda310e39f5e8722bb1da7385bf97 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.7E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain VV1_1337 a5cbda310e39f5e8722bb1da7385bf97 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_1337 a5cbda310e39f5e8722bb1da7385bf97 156 SUPERFAMILY SSF47973 6 149 4.97E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VV1_1337 a5cbda310e39f5e8722bb1da7385bf97 156 PIRSF PIRSF002122 3 156 2.3E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VV1_1337 a5cbda310e39f5e8722bb1da7385bf97 156 Gene3D G3DSA:1.10.455.10 2 155 2.5E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VV1_1337 a5cbda310e39f5e8722bb1da7385bf97 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.12 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VV1_3002 b62b83239ba9604b43b9d961b205db76 212 Gene3D G3DSA:3.40.50.300 4 211 1.3E-63 T 14-10-2018 VV1_3002 b62b83239ba9604b43b9d961b205db76 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.325 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VV1_3002 b62b83239ba9604b43b9d961b205db76 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 8.0E-64 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VV1_3002 b62b83239ba9604b43b9d961b205db76 212 SUPERFAMILY SSF52540 1 210 1.4E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3002 b62b83239ba9604b43b9d961b205db76 212 Pfam PF02223 Thymidylate kinase 9 199 3.7E-58 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VV1_3002 b62b83239ba9604b43b9d961b205db76 212 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VV1_1711 c5c38692d86518fbbfebdbfa07926484 443 PIRSF PIRSF006603 1 441 3.6E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1711 c5c38692d86518fbbfebdbfa07926484 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 8.9E-48 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1711 c5c38692d86518fbbfebdbfa07926484 443 Pfam PF01554 MatE 15 176 8.0E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1711 c5c38692d86518fbbfebdbfa07926484 443 Pfam PF01554 MatE 240 398 4.5E-9 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_1066 5771af9f819c564833870d79b0bbc2c2 327 SUPERFAMILY SSF53850 137 277 1.15E-9 T 14-10-2018 VV2_1066 5771af9f819c564833870d79b0bbc2c2 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 2.2E-80 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VV2_1066 5771af9f819c564833870d79b0bbc2c2 327 Gene3D G3DSA:3.40.190.170 29 327 1.9E-107 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VV2_1066 5771af9f819c564833870d79b0bbc2c2 327 PIRSF PIRSF006470 1 326 4.5E-94 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VV2_1066 5771af9f819c564833870d79b0bbc2c2 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 311 1.0E-87 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 Gene3D G3DSA:3.30.70.20 29 83 8.4E-12 T 14-10-2018 VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 SUPERFAMILY SSF46548 31 154 9.94E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.887 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 Pfam PF12838 4Fe-4S dicluster domain 106 151 1.4E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 Pfam PF12838 4Fe-4S dicluster domain 34 79 6.2E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 Gene3D G3DSA:3.30.70.20 92 157 1.0E-9 T 14-10-2018 VV2_1693 34eee9d68eeea4f1d36e08d9ed0a3b6d 160 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 19 154 1.3E-41 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VV1_0130 57df654fd34e048fc1bedee594a3afd0 323 Gene3D G3DSA:1.10.530.10 66 318 2.1E-91 T 14-10-2018 VV1_0130 57df654fd34e048fc1bedee594a3afd0 323 Gene3D G3DSA:1.10.8.350 34 199 2.1E-91 T 14-10-2018 VV1_0130 57df654fd34e048fc1bedee594a3afd0 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 1.4E-113 T 14-10-2018 IPR011970 Lytic murein transglycosylase VV1_0130 57df654fd34e048fc1bedee594a3afd0 323 SUPERFAMILY SSF53955 12 322 4.78E-100 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_0130 57df654fd34e048fc1bedee594a3afd0 323 Pfam PF13406 Transglycosylase SLT domain 23 319 9.6E-111 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 VV2_0899 b7526fdebf2ca3a5956d02ff6ce5a0e0 155 Pfam PF07670 Nucleoside recognition 31 124 2.0E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 SUPERFAMILY SSF53901 1 251 2.47E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 Gene3D G3DSA:3.40.47.10 1 253 1.3E-68 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.4E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 SUPERFAMILY SSF53901 213 401 3.0E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 Gene3D G3DSA:3.40.47.10 258 401 7.6E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.5E-46 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VV1_1986 e20f78db70c78b95fd7b6b2aa9fead89 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.3E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VV1_1210 212ab150c3477692c596cc114ac218df 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 5.4E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1210 212ab150c3477692c596cc114ac218df 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 2.2E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1210 212ab150c3477692c596cc114ac218df 122 SUPERFAMILY SSF48300 4 58 1.83E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1210 212ab150c3477692c596cc114ac218df 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 93 2.0E-12 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1210 212ab150c3477692c596cc114ac218df 122 SUPERFAMILY SSF54736 51 122 1.62E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV1_1210 212ab150c3477692c596cc114ac218df 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.725 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1210 212ab150c3477692c596cc114ac218df 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 4.3E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1210 212ab150c3477692c596cc114ac218df 122 Gene3D G3DSA:1.20.5.710 2 51 6.9E-23 T 14-10-2018 VV1_1210 212ab150c3477692c596cc114ac218df 122 Gene3D G3DSA:3.30.1390.10 52 122 3.3E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VV1_0489 2bd2ec621959bdccc47ff03ff29b2ec1 102 Pfam PF01371 Trp repressor protein 9 94 5.2E-34 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VV1_0489 2bd2ec621959bdccc47ff03ff29b2ec1 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 81 2.0E-39 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VV1_0489 2bd2ec621959bdccc47ff03ff29b2ec1 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 2 84 4.1E-27 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VV1_0489 2bd2ec621959bdccc47ff03ff29b2ec1 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.735 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VV1_0489 2bd2ec621959bdccc47ff03ff29b2ec1 102 PIRSF PIRSF003196 1 100 4.7E-41 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VV1_0489 2bd2ec621959bdccc47ff03ff29b2ec1 102 Gene3D G3DSA:1.10.1270.10 1 98 5.2E-34 T 14-10-2018 IPR038116 TrpR-like superfamily VV1_0489 2bd2ec621959bdccc47ff03ff29b2ec1 102 SUPERFAMILY SSF48295 2 95 1.78E-30 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 Gene3D G3DSA:3.40.50.150 13 363 7.8E-142 T 14-10-2018 VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 SUPERFAMILY SSF53335 10 367 2.35E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 368 1.5E-192 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 3.0E-196 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.968 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 Gene3D G3DSA:3.40.1350.30 45 189 7.8E-142 T 14-10-2018 VV1_1171 460169b1da7750d3987f182fb1fe4fd9 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VV2_0625 c17a19bb72b1fe45e8a4350f9c80ce36 134 SUPERFAMILY SSF158682 5 117 1.2E-15 T 14-10-2018 IPR029024 TerB-like VV2_0625 c17a19bb72b1fe45e8a4350f9c80ce36 134 Pfam PF05099 Tellurite resistance protein TerB 10 110 1.9E-5 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VV2_0625 c17a19bb72b1fe45e8a4350f9c80ce36 134 Gene3D G3DSA:1.10.3680.10 2 129 3.5E-13 T 14-10-2018 IPR029024 TerB-like VV1_3001 5d70b52e8464f42116374671ee484e68 318 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 205 312 1.2E-19 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3001 5d70b52e8464f42116374671ee484e68 318 SUPERFAMILY SSF52540 3 192 4.59E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3001 5d70b52e8464f42116374671ee484e68 318 Gene3D G3DSA:1.20.272.10 209 317 2.3E-6 T 14-10-2018 VV1_3001 5d70b52e8464f42116374671ee484e68 318 Pfam PF13177 DNA polymerase III, delta subunit 10 165 2.8E-43 T 14-10-2018 VV1_3001 5d70b52e8464f42116374671ee484e68 318 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 11 194 9.5E-60 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3001 5d70b52e8464f42116374671ee484e68 318 SUPERFAMILY SSF48019 205 317 2.72E-23 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VV1_3001 5d70b52e8464f42116374671ee484e68 318 Gene3D G3DSA:3.40.50.300 1 166 3.2E-49 T 14-10-2018 VV2_1025 51eb1ca0cc56e06e694a4096536e6b11 262 SUPERFAMILY SSF46785 5 70 1.18E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1025 51eb1ca0cc56e06e694a4096536e6b11 262 SMART SM00420 6 58 5.8E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV2_1025 51eb1ca0cc56e06e694a4096536e6b11 262 SMART SM01134 73 233 2.0E-68 T 14-10-2018 VV2_1025 51eb1ca0cc56e06e694a4096536e6b11 262 SUPERFAMILY SSF100950 74 234 9.21E-34 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV2_1025 51eb1ca0cc56e06e694a4096536e6b11 262 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.3E-51 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VV2_1025 51eb1ca0cc56e06e694a4096536e6b11 262 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 8.4E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV2_0082 97b090e205be1ce68998f167496e2db8 1286 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 150 437 4.0E-81 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VV2_0082 97b090e205be1ce68998f167496e2db8 1286 SUPERFAMILY SSF55486 276 360 1.81E-6 T 14-10-2018 VV2_0082 97b090e205be1ce68998f167496e2db8 1286 Gene3D G3DSA:2.60.40.10 1068 1150 2.0E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0082 97b090e205be1ce68998f167496e2db8 1286 Gene3D G3DSA:2.60.40.10 794 876 7.8E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0082 97b090e205be1ce68998f167496e2db8 1286 PIRSF PIRSF036597 970 1285 2.4E-136 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related VV2_0082 97b090e205be1ce68998f167496e2db8 1286 PIRSF PIRSF036597 7 977 0.0 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related VV1_0710 31cd3ed5ee992fdd5ef14b9ab9ecff13 124 SUPERFAMILY SSF110857 12 123 2.09E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VV1_0710 31cd3ed5ee992fdd5ef14b9ab9ecff13 124 Gene3D G3DSA:3.10.490.10 13 124 2.1E-40 T 14-10-2018 VV1_0710 31cd3ed5ee992fdd5ef14b9ab9ecff13 124 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 14 121 7.8E-26 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VV2_1550 1fd0b826887868bd25ca8d9be71a3808 763 Pfam PF01483 Proprotein convertase P-domain 630 715 2.3E-18 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VV2_1550 1fd0b826887868bd25ca8d9be71a3808 763 SUPERFAMILY SSF55486 171 486 4.47E-43 T 14-10-2018 VV2_1550 1fd0b826887868bd25ca8d9be71a3808 763 SUPERFAMILY SSF49785 589 717 2.72E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1550 1fd0b826887868bd25ca8d9be71a3808 763 Gene3D G3DSA:2.60.120.260 592 743 4.9E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1631 7a06048eddba0337939a8e78bc847637 129 Gene3D G3DSA:3.90.1590.10 2 95 7.5E-8 T 14-10-2018 VV2_1631 7a06048eddba0337939a8e78bc847637 129 SUPERFAMILY SSF51316 6 110 2.3E-20 T 14-10-2018 IPR011057 Mss4-like superfamily VV2_1631 7a06048eddba0337939a8e78bc847637 129 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 109 1.1E-11 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 8.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 8.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 8.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 8.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 8.7E-51 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 SUPERFAMILY SSF63411 4 162 3.85E-66 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.585 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 6.0E-84 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 PIRSF PIRSF006160 1 162 1.0E-66 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 2.4E-61 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1608 a8c914624d0bb57cf95fcb836cf422f2 172 Gene3D G3DSA:3.30.1360.80 1 172 2.0E-72 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_1372 fe9e6791bdc55a6e9f8a4ed056232fcf 263 PIRSF PIRSF000728 2 262 4.8E-70 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1372 fe9e6791bdc55a6e9f8a4ed056232fcf 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 235 2.1E-64 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1372 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.794 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1372 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Pfam PF00696 Amino acid kinase family 9 231 1.6E-36 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV1_1372 fe9e6791bdc55a6e9f8a4ed056232fcf 263 SUPERFAMILY SSF53633 8 262 4.19E-59 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1372 fe9e6791bdc55a6e9f8a4ed056232fcf 263 Gene3D G3DSA:3.40.1160.10 5 260 7.7E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV2_1687 0f37beb3c0f57550be5a5667c182a1cb 486 Gene3D G3DSA:3.40.605.10 18 474 5.3E-179 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV2_1687 0f37beb3c0f57550be5a5667c182a1cb 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VV2_1687 0f37beb3c0f57550be5a5667c182a1cb 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 60.543 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VV2_1687 0f37beb3c0f57550be5a5667c182a1cb 486 Pfam PF00171 Aldehyde dehydrogenase family 15 474 1.7E-175 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV2_1687 0f37beb3c0f57550be5a5667c182a1cb 486 SUPERFAMILY SSF53720 3 478 1.24E-170 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV2_1687 0f37beb3c0f57550be5a5667c182a1cb 486 Gene3D G3DSA:3.40.309.10 253 446 5.3E-179 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV2_0646 2716d09a555e36c64cb807e3b59d0fdb 274 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 23 274 2.4E-80 T 14-10-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF VV2_0646 2716d09a555e36c64cb807e3b59d0fdb 274 Pfam PF13728 F plasmid transfer operon protein 46 263 9.9E-50 T 14-10-2018 IPR039555 F plasmid transfer operon protein VV1_0738 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 14-10-2018 VV1_0738 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV1_0738 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV1_0738 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site VV1_0738 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0738 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VV1_0738 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 Pfam PF00696 Amino acid kinase family 25 270 1.5E-26 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 225.233 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 SUPERFAMILY SSF55729 300 424 2.3E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 1.7E-207 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 Gene3D G3DSA:3.40.630.30 297 445 8.9E-37 T 14-10-2018 VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 Gene3D G3DSA:3.40.1160.10 7 296 9.8E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 PIRSF PIRSF000423 1 445 2.8E-205 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 SUPERFAMILY SSF53633 4 294 6.42E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1799 53fe740306f23d49651d12e4d5a991ec 445 Pfam PF00583 Acetyltransferase (GNAT) family 331 416 4.5E-8 T 14-10-2018 IPR000182 GNAT domain VV2_1454 6fac8c3029a9b76688fee31184b8601a 255 Gene3D G3DSA:3.40.190.10 27 93 6.2E-15 T 14-10-2018 VV2_1454 6fac8c3029a9b76688fee31184b8601a 255 Gene3D G3DSA:3.40.190.10 94 182 6.2E-15 T 14-10-2018 VV2_1454 6fac8c3029a9b76688fee31184b8601a 255 SUPERFAMILY SSF53850 11 199 4.16E-24 T 14-10-2018 VV2_1454 6fac8c3029a9b76688fee31184b8601a 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 179 2.4E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_1104 38b871cd1346aee00c95c3b37d711379 639 SUPERFAMILY SSF53850 83 625 1.99E-77 T 14-10-2018 VV2_1104 38b871cd1346aee00c95c3b37d711379 639 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 534 4.1E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV2_1104 38b871cd1346aee00c95c3b37d711379 639 Gene3D G3DSA:3.10.105.10 351 600 2.8E-37 T 14-10-2018 VV2_1104 38b871cd1346aee00c95c3b37d711379 639 Gene3D G3DSA:3.40.190.10 69 346 4.5E-42 T 14-10-2018 VV1_1477 f466dc04ab4bffaceb87b84484d10418 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 6.4E-116 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VV1_1477 f466dc04ab4bffaceb87b84484d10418 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 6.8E-68 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VV2_0466 66c015fcf00d38b04e8d3172b67af1ae 106 Gene3D G3DSA:3.30.70.1240 1 104 2.6E-28 T 14-10-2018 IPR023389 DOPA-like superfamily VV2_0466 66c015fcf00d38b04e8d3172b67af1ae 106 PIRSF PIRSF028139 1 106 2.7E-43 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VV2_0466 66c015fcf00d38b04e8d3172b67af1ae 106 SUPERFAMILY SSF143410 1 103 4.84E-34 T 14-10-2018 IPR023389 DOPA-like superfamily VV2_0466 66c015fcf00d38b04e8d3172b67af1ae 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 2.0E-27 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase VV2_0192 d73fefa919335621ac8a8e3935fa3517 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0192 d73fefa919335621ac8a8e3935fa3517 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0192 d73fefa919335621ac8a8e3935fa3517 241 SUPERFAMILY SSF46689 9 86 1.69E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0192 d73fefa919335621ac8a8e3935fa3517 241 Gene3D G3DSA:1.10.357.10 1 201 8.9E-24 T 14-10-2018 VV2_0192 d73fefa919335621ac8a8e3935fa3517 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1250 3ee1a38aadf8b39af5a7affa513978e5 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VV2_1250 3ee1a38aadf8b39af5a7affa513978e5 817 Gene3D G3DSA:3.40.50.2000 475 797 2.0E-142 T 14-10-2018 VV2_1250 3ee1a38aadf8b39af5a7affa513978e5 817 PIRSF PIRSF000460 1 817 2.2E-211 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VV2_1250 3ee1a38aadf8b39af5a7affa513978e5 817 SUPERFAMILY SSF53756 8 815 0.0 T 14-10-2018 VV2_1250 3ee1a38aadf8b39af5a7affa513978e5 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VV2_1250 3ee1a38aadf8b39af5a7affa513978e5 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VV2_1250 3ee1a38aadf8b39af5a7affa513978e5 817 Gene3D G3DSA:3.40.50.2000 5 474 1.6E-192 T 14-10-2018 VV2_0202 8fe669cf86a070a15b79505be20d6fc0 322 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 273 6.5E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV2_0202 8fe669cf86a070a15b79505be20d6fc0 322 Gene3D G3DSA:3.60.10.10 1 318 2.0E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV2_0202 8fe669cf86a070a15b79505be20d6fc0 322 SUPERFAMILY SSF56219 2 317 9.29E-36 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV2_0046 a5cbc8ec853c8ae60c9eba2d4ebca393 213 Pfam PF01852 START domain 23 205 6.0E-11 T 14-10-2018 IPR002913 START domain GO:0008289 VV2_0046 a5cbc8ec853c8ae60c9eba2d4ebca393 213 SUPERFAMILY SSF55961 19 203 7.33E-41 T 14-10-2018 VV2_0046 a5cbc8ec853c8ae60c9eba2d4ebca393 213 PIRSF PIRSF039033 2 213 4.5E-66 T 14-10-2018 IPR028347 START domain-containing protein VV2_0046 a5cbc8ec853c8ae60c9eba2d4ebca393 213 Gene3D G3DSA:3.30.530.20 24 210 2.0E-51 T 14-10-2018 IPR023393 START-like domain superfamily VV1_3195 bc782399e3fe2080be08ce09973abab1 409 SUPERFAMILY SSF111369 100 227 2.35E-11 T 14-10-2018 VV1_3195 bc782399e3fe2080be08ce09973abab1 409 SUPERFAMILY SSF111369 236 330 1.57E-6 T 14-10-2018 VV1_3195 bc782399e3fe2080be08ce09973abab1 409 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 100 329 1.3E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_3195 bc782399e3fe2080be08ce09973abab1 409 Gene3D G3DSA:1.10.287.470 162 227 2.5E-10 T 14-10-2018 VV1_3195 bc782399e3fe2080be08ce09973abab1 409 Gene3D G3DSA:2.40.50.100 100 161 5.0E-11 T 14-10-2018 VV1_3195 bc782399e3fe2080be08ce09973abab1 409 Gene3D G3DSA:2.40.30.170 271 392 1.8E-25 T 14-10-2018 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 Pfam PF03466 LysR substrate binding domain 91 294 1.4E-31 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 Gene3D G3DSA:3.40.190.10 98 283 3.7E-41 T 14-10-2018 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 SUPERFAMILY SSF53850 93 296 4.03E-30 T 14-10-2018 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 SUPERFAMILY SSF46785 6 88 4.77E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.4E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 Gene3D G3DSA:3.40.190.10 169 271 3.7E-41 T 14-10-2018 VV2_1365 d6edaeb4dd4266026bed2d497a09269a 298 Gene3D G3DSA:1.10.10.10 5 97 6.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2947 251881d534aedde21c9840a0dc3bca05 449 SMART SM00382 50 166 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2947 251881d534aedde21c9840a0dc3bca05 449 SUPERFAMILY SSF52540 11 236 1.22E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2947 251881d534aedde21c9840a0dc3bca05 449 Gene3D G3DSA:1.10.3710.10 347 448 4.3E-38 T 14-10-2018 VV1_2947 251881d534aedde21c9840a0dc3bca05 449 Gene3D G3DSA:3.40.50.300 3 165 1.4E-48 T 14-10-2018 VV1_2947 251881d534aedde21c9840a0dc3bca05 449 Gene3D G3DSA:1.20.272.10 242 346 1.9E-43 T 14-10-2018 VV1_2947 251881d534aedde21c9840a0dc3bca05 449 Pfam PF16193 AAA C-terminal domain 190 268 1.6E-21 T 14-10-2018 IPR032423 AAA C-terminal domain VV1_2947 251881d534aedde21c9840a0dc3bca05 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.9E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_2947 251881d534aedde21c9840a0dc3bca05 449 Gene3D G3DSA:1.10.8.60 166 241 2.3E-23 T 14-10-2018 VV1_2947 251881d534aedde21c9840a0dc3bca05 449 SUPERFAMILY SSF48019 253 435 3.51E-73 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VV1_2947 251881d534aedde21c9840a0dc3bca05 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.4E-67 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VV1_2710 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:1.10.10.370 39 109 2.4E-31 T 14-10-2018 VV1_2710 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Gene3D G3DSA:3.30.1420.10 2 38 1.6E-13 T 14-10-2018 VV1_2710 c95f5f5eb218c0ce3d178e2e406ca5b0 109 PIRSF PIRSF006223 2 109 1.2E-40 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VV1_2710 c95f5f5eb218c0ce3d178e2e406ca5b0 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 2.9E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VV1_2710 c95f5f5eb218c0ce3d178e2e406ca5b0 109 SUPERFAMILY SSF69721 2 109 2.75E-41 T 14-10-2018 IPR025526 DsrC-like domain superfamily VV1_2710 c95f5f5eb218c0ce3d178e2e406ca5b0 109 Pfam PF04358 DsrC like protein 4 109 2.4E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 Gene3D G3DSA:3.40.190.10 88 291 4.1E-47 T 14-10-2018 VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 Gene3D G3DSA:3.40.190.10 169 267 4.1E-47 T 14-10-2018 VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 Gene3D G3DSA:1.10.10.10 1 86 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 SUPERFAMILY SSF53850 88 294 3.62E-37 T 14-10-2018 VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 SUPERFAMILY SSF46785 2 82 3.63E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0160 f878a44c954daa521df0c6d5d6d5d215 301 Pfam PF03466 LysR substrate binding domain 96 296 8.8E-25 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 1.4E-38 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 175 496 1.9E-78 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 Gene3D G3DSA:3.40.930.10 1 154 1.8E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 Gene3D G3DSA:3.40.50.2300 520 621 1.2E-33 T 14-10-2018 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 9.5E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 SUPERFAMILY SSF55804 3 146 2.35E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 Pfam PF02378 Phosphotransferase system, EIIC 188 446 7.8E-13 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 SUPERFAMILY SSF52794 525 618 2.96E-28 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 7.3E-28 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VV2_1353 594d8e35a4fac3a032a55fb0e7fd359e 621 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 1.0E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SMART SM01003 4 137 7.5E-79 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Gene3D G3DSA:3.40.50.720 130 305 1.2E-135 T 14-10-2018 VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF52283 1 360 8.5E-67 T 14-10-2018 VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.3E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SMART SM01002 149 297 9.6E-89 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Gene3D G3DSA:3.40.50.720 3 353 1.2E-135 T 14-10-2018 VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 PIRSF PIRSF000183 1 371 8.4E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.9E-155 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 SUPERFAMILY SSF51735 137 303 1.27E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2952 001e2f96003a1cdb9bbe13c1c03a9c3f 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.9E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 SUPERFAMILY SSF52540 133 344 5.31E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 14-10-2018 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Gene3D G3DSA:3.40.50.300 118 297 1.2E-49 T 14-10-2018 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.0E-97 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 SMART SM00760 376 445 3.4E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 1.1E-186 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Pfam PF11638 DnaA N-terminal domain 4 65 9.7E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 SMART SM00382 165 378 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.492 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VV1_0999 4b2afe4237faddbc78ea9fdba552b476 468 Gene3D G3DSA:3.30.300.180 2 114 1.7E-41 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 PIRSF PIRSF000149 1 346 2.5E-126 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 169 325 7.1E-56 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 SUPERFAMILY SSF55347 164 326 2.8E-59 T 14-10-2018 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 346 66.402 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 Gene3D G3DSA:3.30.360.10 163 327 5.5E-127 T 14-10-2018 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 2.3E-30 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 121 134 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 296 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 158 176 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 241 258 1.6E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 SUPERFAMILY SSF51735 2 188 2.38E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 337 3.7E-191 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 SMART SM00846 2 164 8.7E-65 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1539 465391ccc220802bb1f9af46a5997f9d 346 Gene3D G3DSA:3.40.50.720 3 337 5.5E-127 T 14-10-2018 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 Gene3D G3DSA:1.20.140.160 131 283 2.6E-14 T 14-10-2018 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 7.9E-126 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 SUPERFAMILY SSF88659 199 281 8.78E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 279 5.3E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 7.7E-7 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.016 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 Pfam PF04545 Sigma-70, region 4 229 279 9.1E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 Gene3D G3DSA:1.10.601.10 12 122 1.4E-26 T 14-10-2018 VV1_1158 07e0665d46eca0b50609509aab6d6acc 285 SUPERFAMILY SSF88946 11 122 2.22E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VV1_2431 78239c4e07b9fd5a9c56f60e47fd6d59 77 Pfam PF13302 Acetyltransferase (GNAT) domain 1 53 1.0E-10 T 14-10-2018 IPR000182 GNAT domain VV1_2431 78239c4e07b9fd5a9c56f60e47fd6d59 77 Gene3D G3DSA:3.40.630.30 1 76 3.3E-16 T 14-10-2018 VV1_2431 78239c4e07b9fd5a9c56f60e47fd6d59 77 SUPERFAMILY SSF55729 2 74 2.57E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2524 78239c4e07b9fd5a9c56f60e47fd6d59 77 Pfam PF13302 Acetyltransferase (GNAT) domain 1 53 1.0E-10 T 14-10-2018 IPR000182 GNAT domain VV1_2524 78239c4e07b9fd5a9c56f60e47fd6d59 77 Gene3D G3DSA:3.40.630.30 1 76 3.3E-16 T 14-10-2018 VV1_2524 78239c4e07b9fd5a9c56f60e47fd6d59 77 SUPERFAMILY SSF55729 2 74 2.57E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_3079 a7bf55fb1ccc09831592161fc65a4fe7 324 SUPERFAMILY SSF52540 32 302 1.66E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3079 a7bf55fb1ccc09831592161fc65a4fe7 324 SMART SM00382 33 239 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_3079 a7bf55fb1ccc09831592161fc65a4fe7 324 Gene3D G3DSA:3.40.50.300 1 322 4.2E-98 T 14-10-2018 VV1_3079 a7bf55fb1ccc09831592161fc65a4fe7 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.0E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_3079 a7bf55fb1ccc09831592161fc65a4fe7 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 4.5E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_3079 a7bf55fb1ccc09831592161fc65a4fe7 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_3079 a7bf55fb1ccc09831592161fc65a4fe7 324 Pfam PF00005 ABC transporter 25 181 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0722 b2db7f4d3923c90196fc6fa9e5893bd5 152 Gene3D G3DSA:1.10.1130.10 65 132 5.2E-30 T 14-10-2018 VV2_0722 b2db7f4d3923c90196fc6fa9e5893bd5 152 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 9.8E-50 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VV2_0722 b2db7f4d3923c90196fc6fa9e5893bd5 152 PIRSF PIRSF006105 1 152 2.5E-48 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VV2_0722 b2db7f4d3923c90196fc6fa9e5893bd5 152 SUPERFAMILY SSF48695 33 149 5.99E-42 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV2_1024 8bfdf27d6378900fbadb4c092dd1756b 435 PIRSF PIRSF009264 1 430 6.5E-205 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VV2_1024 8bfdf27d6378900fbadb4c092dd1756b 435 Gene3D G3DSA:1.10.400.20 288 411 1.4E-169 T 14-10-2018 VV2_1024 8bfdf27d6378900fbadb4c092dd1756b 435 SUPERFAMILY SSF51569 4 424 3.85E-163 T 14-10-2018 VV2_1024 8bfdf27d6378900fbadb4c092dd1756b 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 4.9E-211 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VV2_1024 8bfdf27d6378900fbadb4c092dd1756b 435 Gene3D G3DSA:3.20.20.70 8 416 1.4E-169 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1024 8bfdf27d6378900fbadb4c092dd1756b 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 7.4E-193 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 SUPERFAMILY SSF56601 30 466 2.67E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_1685 f4c0094492eca7845712e696ed5607e5 476 Gene3D G3DSA:3.50.80.20 86 178 3.2E-11 T 14-10-2018 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 Gene3D G3DSA:3.40.710.10 239 470 1.4E-56 T 14-10-2018 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 48 439 5.1E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 279 301 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 338 352 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 417 430 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 62 81 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 353 367 3.3E-26 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_1685 f4c0094492eca7845712e696ed5607e5 476 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 36 451 4.4E-98 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV1_0585 f343ccb3b94d40dce0abf58ebe97fb37 105 Pfam PF04999 Cell division protein FtsL 8 103 9.7E-37 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VV1_0585 f343ccb3b94d40dce0abf58ebe97fb37 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 103 1.6E-27 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VV1_0585 f343ccb3b94d40dce0abf58ebe97fb37 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.39 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VV1_0293 2ab6168e50b98bcdd85cccd383f172ee 225 Gene3D G3DSA:1.10.3720.10 12 225 5.7E-52 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0293 2ab6168e50b98bcdd85cccd383f172ee 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 8.7E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0293 2ab6168e50b98bcdd85cccd383f172ee 225 SUPERFAMILY SSF161098 15 210 1.16E-47 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1973 da87863b14adb351c697f8a8c8066bdb 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 5.1E-84 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 SUPERFAMILY SSF56024 247 392 9.42E-26 T 14-10-2018 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 PIRSF PIRSF000850 2 446 1.6E-213 T 14-10-2018 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 Gene3D G3DSA:3.30.870.10 12 441 2.1E-167 T 14-10-2018 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 Gene3D G3DSA:3.30.870.10 18 225 2.1E-167 T 14-10-2018 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 Pfam PF13091 PLD-like domain 34 146 2.4E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 Pfam PF13091 PLD-like domain 252 402 1.2E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 SMART SM00155 347 374 0.0047 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 SMART SM00155 126 152 5.3E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_1195 d9ed251740cad5680eda949e535ee9ae 446 SUPERFAMILY SSF56024 8 179 1.88E-27 T 14-10-2018 VV1_2089 37cfafa9aff4f29542bc254229d73a18 262 Gene3D G3DSA:3.30.70.270 121 262 1.1E-26 T 14-10-2018 VV1_2089 37cfafa9aff4f29542bc254229d73a18 262 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 262 9.0E-21 T 14-10-2018 IPR000160 GGDEF domain VV1_2089 37cfafa9aff4f29542bc254229d73a18 262 SUPERFAMILY SSF55073 136 262 3.3E-26 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2089 37cfafa9aff4f29542bc254229d73a18 262 SMART SM00267 120 261 4.0E-19 T 14-10-2018 IPR000160 GGDEF domain VV1_2089 37cfafa9aff4f29542bc254229d73a18 262 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 262 3.8E-20 T 14-10-2018 IPR000160 GGDEF domain VV2_0272 bc5c4a9ebcd2e535c3c7635ba50ee20d 227 SUPERFAMILY SSF160467 7 95 1.19E-10 T 14-10-2018 VV2_0272 bc5c4a9ebcd2e535c3c7635ba50ee20d 227 Gene3D G3DSA:2.40.100.10 91 226 1.7E-44 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV2_0272 bc5c4a9ebcd2e535c3c7635ba50ee20d 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 202 2.9E-55 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VV2_0272 bc5c4a9ebcd2e535c3c7635ba50ee20d 227 Gene3D G3DSA:3.30.1360.40 6 83 2.1E-8 T 14-10-2018 VV2_0272 bc5c4a9ebcd2e535c3c7635ba50ee20d 227 SUPERFAMILY SSF50891 92 220 3.68E-34 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV2_0272 bc5c4a9ebcd2e535c3c7635ba50ee20d 227 SMART SM00796 6 204 1.3E-58 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VV2_1151 b9b634d45414800874694fef9155fbbb 325 SUPERFAMILY SSF53098 132 286 4.17E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_1151 b9b634d45414800874694fef9155fbbb 325 Pfam PF13518 Helix-turn-helix domain 7 57 1.5E-11 T 14-10-2018 VV2_1151 b9b634d45414800874694fef9155fbbb 325 Pfam PF00665 Integrase core domain 132 240 7.1E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV2_1151 b9b634d45414800874694fef9155fbbb 325 Gene3D G3DSA:3.30.420.10 132 293 1.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV2_1151 b9b634d45414800874694fef9155fbbb 325 SUPERFAMILY SSF46689 6 110 8.06E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1172 6a1a04f09f9b8beab915962cb534cf7c 324 SMART SM00470 53 149 2.5E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VV2_1172 6a1a04f09f9b8beab915962cb534cf7c 324 SUPERFAMILY SSF110849 75 150 1.41E-8 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VV2_1172 6a1a04f09f9b8beab915962cb534cf7c 324 Pfam PF02195 ParB-like nuclease domain 77 145 3.1E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin VV2_1172 6a1a04f09f9b8beab915962cb534cf7c 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 231 3.8E-23 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VV2_1172 6a1a04f09f9b8beab915962cb534cf7c 324 Gene3D G3DSA:1.10.10.2830 153 271 2.2E-16 T 14-10-2018 VV1_0670 c5a516981688324e960ebf8e25793526 85 SUPERFAMILY SSF110324 2 80 1.43E-34 T 14-10-2018 VV1_0670 c5a516981688324e960ebf8e25793526 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0670 c5a516981688324e960ebf8e25793526 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0670 c5a516981688324e960ebf8e25793526 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.9E-44 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0670 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.8E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0670 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.8E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0670 c5a516981688324e960ebf8e25793526 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.8E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0670 c5a516981688324e960ebf8e25793526 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.447 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0670 c5a516981688324e960ebf8e25793526 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0670 c5a516981688324e960ebf8e25793526 85 Gene3D G3DSA:2.40.50.100 21 85 2.5E-31 T 14-10-2018 VV1_2585 a3997b420f40993358cb4492fb2b2762 152 Pfam PF11749 Protein of unknown function (DUF3305) 45 142 1.6E-21 T 14-10-2018 IPR021736 Protein of unknown function DUF3305 VV1_0634 2f2b23d350fec4dc7047c30bbe916ac3 238 PIRSF PIRSF029033 1 238 1.2E-103 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VV1_0634 2f2b23d350fec4dc7047c30bbe916ac3 238 Pfam PF04402 Protein of unknown function (DUF541) 41 211 9.2E-16 T 14-10-2018 IPR007497 Protein of unknown function DUF541 VV1_2139 ba5e5d0f9f041567a783a5104b603879 215 Hamap MF_01150 Chaperone protein TorD [torD]. 4 213 34.283 T 14-10-2018 IPR023069 Chaperone TorD VV1_2139 ba5e5d0f9f041567a783a5104b603879 215 Gene3D G3DSA:1.20.1280.20 130 215 1.1E-20 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VV1_2139 ba5e5d0f9f041567a783a5104b603879 215 Gene3D G3DSA:1.20.120.1820 4 127 3.9E-41 T 14-10-2018 VV1_2139 ba5e5d0f9f041567a783a5104b603879 215 Pfam PF02613 Nitrate reductase delta subunit 51 183 8.1E-39 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VV1_2139 ba5e5d0f9f041567a783a5104b603879 215 SUPERFAMILY SSF89155 9 213 3.66E-51 T 14-10-2018 IPR036411 TorD-like superfamily VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 15 206 1.4E-81 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 Pfam PF11612 Type II secretion system (T2SS), protein J 67 204 1.7E-39 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 37 4.3E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 37 3.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 Gene3D G3DSA:3.10.610.10 46 159 3.2E-35 T 14-10-2018 VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 Gene3D G3DSA:2.10.70.20 161 209 3.6E-15 T 14-10-2018 VV1_0871 c2b4248d962bfc6c48dc17c6d9805a38 233 SUPERFAMILY SSF54523 48 211 1.22E-55 T 14-10-2018 VV1_0632 49093642fe448de279058b007c61c618 624 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 386 622 1.5E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VV1_0632 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 414 427 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 583 598 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 438 446 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 562 574 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 PRINTS PR00046 Major sigma-70 factor signature 598 609 3.3E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_0632 49093642fe448de279058b007c61c618 624 Pfam PF04542 Sigma-70 region 2 390 459 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.10.10 463 539 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0632 49093642fe448de279058b007c61c618 624 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 583 609 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 386 611 1.5E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.601.10 113 459 2.8E-139 T 14-10-2018 VV1_0632 49093642fe448de279058b007c61c618 624 SUPERFAMILY SSF88659 463 536 2.25E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_0632 49093642fe448de279058b007c61c618 624 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 623 45.832 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VV1_0632 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.220.120 1 64 5.3E-29 T 14-10-2018 VV1_0632 49093642fe448de279058b007c61c618 624 Pfam PF04545 Sigma-70, region 4 558 611 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 414 427 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 Pfam PF04539 Sigma-70 region 3 469 544 1.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 SUPERFAMILY SSF88659 520 622 1.37E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_0632 49093642fe448de279058b007c61c618 624 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 2.2E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 SUPERFAMILY SSF88946 115 457 1.44E-97 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VV1_0632 49093642fe448de279058b007c61c618 624 Gene3D G3DSA:1.10.10.10 540 624 4.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0632 49093642fe448de279058b007c61c618 624 Pfam PF04546 Sigma-70, non-essential region 139 359 4.5E-68 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV2_1391 97d1c3f6f1546f31d3cb21ada23befff 300 Gene3D G3DSA:3.40.190.290 91 291 3.5E-57 T 14-10-2018 VV2_1391 97d1c3f6f1546f31d3cb21ada23befff 300 Pfam PF03466 LysR substrate binding domain 89 290 7.1E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1391 97d1c3f6f1546f31d3cb21ada23befff 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1391 97d1c3f6f1546f31d3cb21ada23befff 300 SUPERFAMILY SSF53850 90 294 6.36E-43 T 14-10-2018 VV2_1391 97d1c3f6f1546f31d3cb21ada23befff 300 SUPERFAMILY SSF46785 4 86 4.28E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1391 97d1c3f6f1546f31d3cb21ada23befff 300 Gene3D G3DSA:1.10.10.10 3 89 3.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1334 0d9f45da34b91f844009555ec4deaab3 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 5.6E-30 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV2_1334 0d9f45da34b91f844009555ec4deaab3 244 Gene3D G3DSA:3.30.1330.30 1 93 9.0E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VV2_1334 0d9f45da34b91f844009555ec4deaab3 244 SUPERFAMILY SSF75217 97 243 4.19E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV2_1334 0d9f45da34b91f844009555ec4deaab3 244 SUPERFAMILY SSF55315 4 92 4.24E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VV2_1334 0d9f45da34b91f844009555ec4deaab3 244 Gene3D G3DSA:3.40.1280.10 96 244 8.7E-41 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_1650 44613f04113ed2a889497b978d601a6d 831 Pfam PF00271 Helicase conserved C-terminal domain 215 337 2.1E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1650 44613f04113ed2a889497b978d601a6d 831 PIRSF PIRSF005496 10 830 0.0 T 14-10-2018 VV1_1650 44613f04113ed2a889497b978d601a6d 831 SUPERFAMILY SSF52540 11 488 7.19E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1650 44613f04113ed2a889497b978d601a6d 831 SMART SM00847 398 487 2.8E-7 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VV1_1650 44613f04113ed2a889497b978d601a6d 831 Gene3D G3DSA:3.40.50.300 191 357 7.1E-53 T 14-10-2018 VV1_1650 44613f04113ed2a889497b978d601a6d 831 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 15 828 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VV1_1650 44613f04113ed2a889497b978d601a6d 831 Pfam PF04408 Helicase associated domain (HA2) 399 462 2.1E-6 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VV1_1650 44613f04113ed2a889497b978d601a6d 831 Gene3D G3DSA:3.40.50.300 5 190 6.7E-54 T 14-10-2018 VV1_1650 44613f04113ed2a889497b978d601a6d 831 SMART SM00487 13 197 6.7E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_1650 44613f04113ed2a889497b978d601a6d 831 SMART SM00490 237 338 1.8E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1650 44613f04113ed2a889497b978d601a6d 831 Pfam PF08482 ATP-dependent helicase C-terminal 684 816 9.8E-53 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VV1_1650 44613f04113ed2a889497b978d601a6d 831 Pfam PF00270 DEAD/DEAH box helicase 25 174 7.7E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_2386 b26329bc5dc3c7fdf62ade55f1812b40 153 Gene3D G3DSA:1.20.120.1630 3 153 7.6E-22 T 14-10-2018 VV1_2386 b26329bc5dc3c7fdf62ade55f1812b40 153 Pfam PF04191 Phospholipid methyltransferase 38 142 5.7E-13 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VV1_2386 b26329bc5dc3c7fdf62ade55f1812b40 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 5.0E-21 T 14-10-2018 VV1_2479 ec0904810e9067ba88eb19ed9a94aea0 159 Pfam PF00583 Acetyltransferase (GNAT) family 46 138 3.7E-11 T 14-10-2018 IPR000182 GNAT domain VV1_2479 ec0904810e9067ba88eb19ed9a94aea0 159 SUPERFAMILY SSF55729 2 141 2.06E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2479 ec0904810e9067ba88eb19ed9a94aea0 159 Gene3D G3DSA:3.40.630.30 11 155 1.6E-22 T 14-10-2018 VV2_1144 e8ee97647149da8581db32c1faf9fb15 247 Gene3D G3DSA:3.20.20.450 18 247 4.1E-43 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1144 e8ee97647149da8581db32c1faf9fb15 247 SMART SM00052 8 244 5.2E-10 T 14-10-2018 IPR001633 EAL domain VV2_1144 e8ee97647149da8581db32c1faf9fb15 247 Pfam PF00563 EAL domain 22 243 2.3E-38 T 14-10-2018 IPR001633 EAL domain VV2_1144 e8ee97647149da8581db32c1faf9fb15 247 SUPERFAMILY SSF141868 24 244 4.58E-43 T 14-10-2018 IPR035919 EAL domain superfamily VV1_0505 dc1858da0a7e4ab69b034843d023a555 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 9.6E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VV1_0505 dc1858da0a7e4ab69b034843d023a555 143 SUPERFAMILY SSF54534 4 142 5.7E-37 T 14-10-2018 VV1_0505 dc1858da0a7e4ab69b034843d023a555 143 Gene3D G3DSA:3.10.50.40 13 140 6.5E-43 T 14-10-2018 VV1_0505 dc1858da0a7e4ab69b034843d023a555 143 Gene3D G3DSA:2.40.10.330 72 128 6.5E-43 T 14-10-2018 VV1_0558 2681542c31ee0a13f99047aa220c8c1e 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.6E-100 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_0558 2681542c31ee0a13f99047aa220c8c1e 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.3E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV1_0558 2681542c31ee0a13f99047aa220c8c1e 231 Gene3D G3DSA:3.40.50.1580 1 231 6.6E-72 T 14-10-2018 VV1_0558 2681542c31ee0a13f99047aa220c8c1e 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.082 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VV1_0558 2681542c31ee0a13f99047aa220c8c1e 231 SUPERFAMILY SSF53167 1 230 4.58E-75 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.142 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 Gene3D G3DSA:3.40.50.450 4 287 1.1E-115 T 14-10-2018 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 SUPERFAMILY SSF53784 3 310 1.2E-112 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PIRSF PIRSF000532 1 320 2.9E-126 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 6.5E-129 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 5.9E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 Gene3D G3DSA:3.40.50.460 143 252 1.1E-115 T 14-10-2018 VV1_1257 ae815f0be22e5f1c50de6257ccaffd52 320 Pfam PF00365 Phosphofructokinase 4 276 2.5E-108 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 5.6E-27 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 5.9E-39 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.4E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.4E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.4E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.4E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.4E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 PIRSF PIRSF000349 1 202 6.6E-82 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 Gene3D G3DSA:2.40.500.20 84 201 9.2E-48 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 SUPERFAMILY SSF46609 1 86 7.46E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 Gene3D G3DSA:1.10.287.990 20 83 2.1E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_1252 bd063081e4d6e803ce75c60e19e84fd2 202 SUPERFAMILY SSF54719 87 201 1.7E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Gene3D G3DSA:2.60.40.10 626 730 8.7E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Gene3D G3DSA:2.60.40.10 218 330 1.2E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 SUPERFAMILY SSF49303 634 728 1.2E-25 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1030 17.055 T 14-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 444 458 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 SUPERFAMILY SSF51445 331 619 4.59E-99 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 SUPERFAMILY SSF49303 219 330 1.5E-20 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 SUPERFAMILY SSF74650 738 1029 1.48E-90 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 372 390 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 341 355 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 444 459 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 528 543 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 3.2E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 SMART SM01038 754 1028 6.2E-100 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Gene3D G3DSA:2.70.98.10 736 1029 2.1E-92 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 332 624 2.0E-111 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Gene3D G3DSA:2.60.120.260 7 216 8.4E-82 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 SUPERFAMILY SSF49785 9 215 6.09E-65 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Pfam PF16353 Domain of unknown function(DUF4981) 639 724 5.7E-20 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Pfam PF02929 Beta galactosidase small chain 758 1026 5.3E-64 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Gene3D G3DSA:3.20.20.80 331 621 8.9E-124 T 14-10-2018 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Pfam PF00703 Glycosyl hydrolases family 2 219 330 1.9E-14 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VV2_1327 b319570451e37c1ccb01cd188b416a37 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 215 1.1E-54 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV2_1480 ef9c23d74802e2e62bb167cd893841fd 445 SUPERFAMILY SSF53098 94 390 9.1E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_1480 ef9c23d74802e2e62bb167cd893841fd 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV2_1480 ef9c23d74802e2e62bb167cd893841fd 445 Pfam PF01609 Transposase DDE domain 129 356 3.6E-25 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV1_2969 ef9c23d74802e2e62bb167cd893841fd 445 SUPERFAMILY SSF53098 94 390 9.1E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2969 ef9c23d74802e2e62bb167cd893841fd 445 Pfam PF13006 Insertion element 4 transposase N-terminal 20 112 9.7E-29 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV1_2969 ef9c23d74802e2e62bb167cd893841fd 445 Pfam PF01609 Transposase DDE domain 129 356 3.6E-25 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 Gene3D G3DSA:3.30.565.10 410 558 2.9E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 SUPERFAMILY SSF55781 227 351 2.45E-7 T 14-10-2018 VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 Gene3D G3DSA:3.30.450.40 227 352 5.3E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 Pfam PF06580 Histidine kinase 367 444 1.9E-26 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 SUPERFAMILY SSF55874 420 553 9.99E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 Pfam PF13492 GAF domain 241 351 5.8E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 Pfam PF07694 5TMR of 5TMR-LYT 26 194 1.0E-60 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VV1_0502 1a6fcd207ea2baa74537a4d2787cd6ce 560 Gene3D G3DSA:1.10.1760.20 32 203 4.7E-6 T 14-10-2018 VV1_2466 9ee1c3769bbc3f37c54fbf643128e3ea 1256 SUPERFAMILY SSF52540 188 378 2.89E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2466 9ee1c3769bbc3f37c54fbf643128e3ea 1256 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 195 312 1.3E-4 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VV1_2466 9ee1c3769bbc3f37c54fbf643128e3ea 1256 SMART SM00382 201 323 0.0014 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2466 9ee1c3769bbc3f37c54fbf643128e3ea 1256 Gene3D G3DSA:3.40.50.300 166 312 4.3E-5 T 14-10-2018 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 Gene3D G3DSA:3.30.870.10 49 244 2.6E-37 T 14-10-2018 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 SUPERFAMILY SSF56024 56 228 2.0E-38 T 14-10-2018 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 Pfam PF13091 PLD-like domain 306 444 2.1E-21 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 Pfam PF13091 PLD-like domain 72 193 1.9E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 Gene3D G3DSA:3.30.870.10 284 460 3.1E-36 T 14-10-2018 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 SMART SM00155 161 188 0.34 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 SMART SM00155 395 422 5.2E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV2_0702 750ae65058e86a4e44818ee68e028ef3 501 SUPERFAMILY SSF56024 276 441 2.0E-32 T 14-10-2018 VV1_2432 07a6a202893a412214c95c46d4340605 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.1E-15 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV1_2432 07a6a202893a412214c95c46d4340605 85 SUPERFAMILY SSF143120 1 75 6.1E-17 T 14-10-2018 IPR036165 YefM-like superfamily VV1_2432 07a6a202893a412214c95c46d4340605 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 14-10-2018 VV1_2432 07a6a202893a412214c95c46d4340605 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 14-10-2018 VV1_2409 07a6a202893a412214c95c46d4340605 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.1E-15 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV1_2409 07a6a202893a412214c95c46d4340605 85 SUPERFAMILY SSF143120 1 75 6.1E-17 T 14-10-2018 IPR036165 YefM-like superfamily VV1_2409 07a6a202893a412214c95c46d4340605 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 14-10-2018 VV1_2409 07a6a202893a412214c95c46d4340605 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 14-10-2018 VV1_0013 96773909ce9e6a72cf19e8910b065948 179 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 179 34.782 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VV1_0013 96773909ce9e6a72cf19e8910b065948 179 SUPERFAMILY SSF109604 51 178 7.85E-19 T 14-10-2018 VV1_0013 96773909ce9e6a72cf19e8910b065948 179 Gene3D G3DSA:1.10.3210.10 47 179 1.7E-45 T 14-10-2018 VV1_0013 96773909ce9e6a72cf19e8910b065948 179 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 65 161 1.0E-40 T 14-10-2018 VV2_0949 25a7a990babb5ff1211608fc33ea74ce 328 SUPERFAMILY SSF46626 26 174 1.13E-46 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0949 25a7a990babb5ff1211608fc33ea74ce 328 Pfam PF00034 Cytochrome c 195 304 2.2E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0949 25a7a990babb5ff1211608fc33ea74ce 328 PIRSF PIRSF000294 4 328 1.1E-121 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VV2_0949 25a7a990babb5ff1211608fc33ea74ce 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 6.1E-48 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VV2_0949 25a7a990babb5ff1211608fc33ea74ce 328 SUPERFAMILY SSF46626 173 324 2.87E-41 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0949 25a7a990babb5ff1211608fc33ea74ce 328 Gene3D G3DSA:1.10.760.10 39 186 3.5E-112 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0949 25a7a990babb5ff1211608fc33ea74ce 328 Gene3D G3DSA:1.10.760.10 37 310 3.5E-112 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_3073 ffa44385c082e21cffce948391bd5cee 187 Pfam PF04279 Intracellular septation protein A 1 174 1.0E-68 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VV1_3073 ffa44385c082e21cffce948391bd5cee 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.496 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VV1_3073 ffa44385c082e21cffce948391bd5cee 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 2.6E-64 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VV2_1071 981eb3180c330091a7523b14098f2458 325 Pfam PF00294 pfkB family carbohydrate kinase 1 314 4.7E-62 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VV2_1071 981eb3180c330091a7523b14098f2458 325 SUPERFAMILY SSF53613 1 314 8.42E-68 T 14-10-2018 IPR029056 Ribokinase-like VV2_1071 981eb3180c330091a7523b14098f2458 325 Gene3D G3DSA:3.40.1190.20 1 320 6.3E-76 T 14-10-2018 IPR029056 Ribokinase-like VV2_1071 981eb3180c330091a7523b14098f2458 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 SUPERFAMILY SSF46785 7 84 2.65E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 Pfam PF01022 Bacterial regulatory protein, arsR family 14 58 2.9E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 30 48 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 Gene3D G3DSA:1.10.10.10 5 95 5.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.8E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV2_0894 d59cfe18a82f3f0580166de7bc4f9ed5 115 SMART SM00418 5 84 1.1E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_2942 a59452c12eb5e970142e992bbe916e5a 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 382 43.573 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VV1_2942 a59452c12eb5e970142e992bbe916e5a 385 SUPERFAMILY SSF53383 6 378 4.17E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2942 a59452c12eb5e970142e992bbe916e5a 385 Pfam PF00155 Aminotransferase class I and II 43 377 2.4E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV1_2942 a59452c12eb5e970142e992bbe916e5a 385 Gene3D G3DSA:3.40.640.10 59 285 3.3E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2942 a59452c12eb5e970142e992bbe916e5a 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 378 9.7E-131 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VV1_2942 a59452c12eb5e970142e992bbe916e5a 385 Gene3D G3DSA:3.90.1150.10 43 375 3.3E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 SUPERFAMILY SSF53807 20 288 2.6E-73 T 14-10-2018 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 275 8.4E-55 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 Gene3D G3DSA:3.40.50.1980 21 177 5.2E-44 T 14-10-2018 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 Gene3D G3DSA:3.40.50.1980 178 291 7.5E-36 T 14-10-2018 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 PRINTS PR00690 Adhesin family signature 177 198 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 PRINTS PR00690 Adhesin family signature 50 63 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 PRINTS PR00690 Adhesin family signature 230 248 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 PRINTS PR00690 Adhesin family signature 63 80 1.0E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 PRINTS PR00691 Adhesin B signature 121 140 9.9E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 PRINTS PR00691 Adhesin B signature 63 82 9.9E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VV1_0151 56a69aeafd142c7bde69927cbf9c0d6a 291 PRINTS PR00691 Adhesin B signature 44 62 9.9E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 VV2_1640 69663106876177ef4893ad36bfa14be6 202 Pfam PF11140 Protein of unknown function (DUF2913) 13 192 5.6E-46 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 VV1_1348 1773dea0095c3fd230837bd27c3664b5 208 SUPERFAMILY SSF46785 6 183 1.28E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1348 1773dea0095c3fd230837bd27c3664b5 208 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.6E-6 T 14-10-2018 VV1_1348 1773dea0095c3fd230837bd27c3664b5 208 Gene3D G3DSA:1.10.10.10 2 85 4.9E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0702 f6fd4ac79733405817170754da78bdb0 535 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 516 1.0E-160 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VV1_0702 f6fd4ac79733405817170754da78bdb0 535 Gene3D G3DSA:1.10.3720.10 6 259 1.8E-41 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0702 f6fd4ac79733405817170754da78bdb0 535 Gene3D G3DSA:1.10.3720.10 282 530 2.7E-27 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0702 f6fd4ac79733405817170754da78bdb0 535 SUPERFAMILY SSF161098 17 257 3.66E-40 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0702 f6fd4ac79733405817170754da78bdb0 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 512 4.0E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0702 f6fd4ac79733405817170754da78bdb0 535 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 257 1.4E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0702 f6fd4ac79733405817170754da78bdb0 535 SUPERFAMILY SSF161098 278 518 4.58E-30 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 5.1E-85 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 Pfam PF01578 Cytochrome C assembly protein 16 184 1.1E-31 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1963 e88e2b0991173370460473f0e14bc4e3 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.6E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_0433 923d80f3de09dae1110833f7466c22bc 112 Gene3D G3DSA:3.10.20.30 1 112 8.2E-37 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_0433 923d80f3de09dae1110833f7466c22bc 112 SUPERFAMILY SSF54292 5 107 1.57E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV1_0433 923d80f3de09dae1110833f7466c22bc 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VV1_0433 923d80f3de09dae1110833f7466c22bc 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.2E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV1_0433 923d80f3de09dae1110833f7466c22bc 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 3.0E-61 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VV1_0433 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VV1_0433 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VV1_0433 923d80f3de09dae1110833f7466c22bc 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VV1_3090 8d3c483e0430782943609ee67af874b7 115 SUPERFAMILY SSF47226 2 107 6.15E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_3090 8d3c483e0430782943609ee67af874b7 115 Pfam PF01627 Hpt domain 24 102 1.0E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_3090 8d3c483e0430782943609ee67af874b7 115 Gene3D G3DSA:1.20.120.160 1 112 3.0E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_3125 3d908686199b812d9bdb0e7ae8345ecc 160 Pfam PF04074 Domain of unknown function (DUF386) 9 155 4.3E-37 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VV1_3125 3d908686199b812d9bdb0e7ae8345ecc 160 SUPERFAMILY SSF51197 8 156 8.51E-38 T 14-10-2018 VV1_3125 3d908686199b812d9bdb0e7ae8345ecc 160 Gene3D G3DSA:2.60.120.370 7 158 1.9E-35 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily VV1_3125 3d908686199b812d9bdb0e7ae8345ecc 160 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 7 156 3.8E-36 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VV2_1648 6a6674217f5394deb51978da4e6aeb4f 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 335 4.2E-43 T 14-10-2018 IPR000160 GGDEF domain VV2_1648 6a6674217f5394deb51978da4e6aeb4f 338 Gene3D G3DSA:3.30.70.270 165 336 5.3E-51 T 14-10-2018 VV2_1648 6a6674217f5394deb51978da4e6aeb4f 338 SUPERFAMILY SSF55073 184 336 1.18E-42 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1648 6a6674217f5394deb51978da4e6aeb4f 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 334 1.3E-41 T 14-10-2018 IPR000160 GGDEF domain VV2_1648 6a6674217f5394deb51978da4e6aeb4f 338 SMART SM00267 168 338 2.0E-53 T 14-10-2018 IPR000160 GGDEF domain VV1_0329 a426ca18bc1f05d02cf95307a385ce30 154 Gene3D G3DSA:3.40.50.2020 1 152 1.1E-40 T 14-10-2018 VV1_0329 a426ca18bc1f05d02cf95307a385ce30 154 Pfam PF00156 Phosphoribosyl transferase domain 32 144 6.1E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV1_0329 a426ca18bc1f05d02cf95307a385ce30 154 SUPERFAMILY SSF53271 5 146 1.26E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV1_0329 a426ca18bc1f05d02cf95307a385ce30 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.625 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VV1_1294 f0f4661fee8256388bbf2cd58172022a 86 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VV1_1294 f0f4661fee8256388bbf2cd58172022a 86 SUPERFAMILY SSF50182 7 69 1.16E-24 T 14-10-2018 IPR010920 LSM domain superfamily VV1_1294 f0f4661fee8256388bbf2cd58172022a 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VV1_1294 f0f4661fee8256388bbf2cd58172022a 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.6E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VV1_1294 f0f4661fee8256388bbf2cd58172022a 86 Gene3D G3DSA:2.30.30.100 1 72 4.5E-35 T 14-10-2018 VV2_0731 82bb75a0c3b662800f2428bda8af0228 427 PIRSF PIRSF006066 1 425 1.2E-140 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV2_0731 82bb75a0c3b662800f2428bda8af0228 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 1.1E-118 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV2_0731 82bb75a0c3b662800f2428bda8af0228 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 1.4E-141 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 SUPERFAMILY SSF50331 238 368 5.83E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 SUPERFAMILY SSF52540 4 245 5.18E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 Gene3D G3DSA:2.40.50.940 224 361 8.1E-31 T 14-10-2018 VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 Gene3D G3DSA:2.40.50.140 293 352 8.1E-31 T 14-10-2018 VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 SMART SM00382 30 214 1.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 Pfam PF00005 ABC transporter 21 163 5.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0032 0ec8d4e48b667b7e6e11b36c597fea05 371 Gene3D G3DSA:3.40.50.300 3 223 3.3E-71 T 14-10-2018 VV2_1663 d0c08dc9384d2775c6ec5d86f3644b18 459 Gene3D G3DSA:3.40.640.10 89 348 1.1E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1663 d0c08dc9384d2775c6ec5d86f3644b18 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV2_1663 d0c08dc9384d2775c6ec5d86f3644b18 459 Gene3D G3DSA:3.90.1150.10 61 444 1.1E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_1663 d0c08dc9384d2775c6ec5d86f3644b18 459 Pfam PF00202 Aminotransferase class-III 57 449 2.0E-85 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV2_1663 d0c08dc9384d2775c6ec5d86f3644b18 459 SUPERFAMILY SSF53383 57 450 4.26E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1663 d0c08dc9384d2775c6ec5d86f3644b18 459 PIRSF PIRSF000521 8 158 1.5E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV2_1663 d0c08dc9384d2775c6ec5d86f3644b18 459 PIRSF PIRSF000521 150 452 2.1E-19 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VV1_2923 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:1.10.287.1050 1 83 9.8E-30 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VV1_2923 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SMART SM00528 88 135 2.9E-25 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VV1_2923 eb8474f5d2e4551f07bd3f970c3d5ddf 135 PIRSF PIRSF002096 1 135 2.6E-54 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VV1_2923 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Pfam PF00816 H-NS histone family 32 129 1.6E-19 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VV1_2923 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 14-10-2018 VV1_2923 eb8474f5d2e4551f07bd3f970c3d5ddf 135 SUPERFAMILY SSF81273 2 58 3.14E-16 T 14-10-2018 VV1_2923 eb8474f5d2e4551f07bd3f970c3d5ddf 135 Gene3D G3DSA:4.10.430.10 92 135 8.3E-25 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 Gene3D G3DSA:2.40.30.10 5 109 9.3E-24 T 14-10-2018 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 Pfam PF00970 Oxidoreductase FAD-binding domain 18 109 1.6E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 SUPERFAMILY SSF54292 238 345 1.7E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 296 304 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 Gene3D G3DSA:3.40.50.80 118 255 3.2E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 337 7.1E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 Gene3D G3DSA:3.10.20.30 260 347 9.6E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 8.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 8.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 8.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 SUPERFAMILY SSF52343 119 250 5.63E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 Pfam PF00175 Oxidoreductase NAD-binding domain 126 229 3.5E-11 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV1_2865 fae6e22767f55764ec50510a1e6dbb0c 347 SUPERFAMILY SSF63380 4 110 3.57E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_2199 b9c787dcecc0c2dc31374f8b496c79f0 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 180 1.3E-8 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VV1_2199 b9c787dcecc0c2dc31374f8b496c79f0 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 510 5.9E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2199 b9c787dcecc0c2dc31374f8b496c79f0 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 6.0E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_2199 b9c787dcecc0c2dc31374f8b496c79f0 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 6.0E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_2199 b9c787dcecc0c2dc31374f8b496c79f0 546 Gene3D G3DSA:1.10.287.950 228 546 4.5E-62 T 14-10-2018 VV1_2199 b9c787dcecc0c2dc31374f8b496c79f0 546 SUPERFAMILY SSF58104 248 546 4.36E-63 T 14-10-2018 VV1_2199 b9c787dcecc0c2dc31374f8b496c79f0 546 SMART SM00283 284 545 2.1E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0483 794aceb04bb58da040d7c108f13410b0 238 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 236 1.8E-71 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VV1_0483 794aceb04bb58da040d7c108f13410b0 238 Gene3D G3DSA:3.60.140.10 1 237 1.7E-86 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VV1_0483 794aceb04bb58da040d7c108f13410b0 238 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 28 237 6.4E-59 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VV1_0483 794aceb04bb58da040d7c108f13410b0 238 SUPERFAMILY SSF64438 2 238 4.4E-83 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VV1_1815 6513be95f39d682fcf68837921565b64 222 Pfam PF12973 ChrR Cupin-like domain 126 196 2.2E-14 T 14-10-2018 IPR025979 ChrR-like cupin domain VV1_1815 6513be95f39d682fcf68837921565b64 222 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 219 2.2E-89 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative VV1_1815 6513be95f39d682fcf68837921565b64 222 Pfam PF13490 Putative zinc-finger 9 37 4.5E-6 T 14-10-2018 IPR027383 Putative zinc-finger VV1_1815 6513be95f39d682fcf68837921565b64 222 Gene3D G3DSA:2.60.120.10 110 200 1.5E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_1815 6513be95f39d682fcf68837921565b64 222 Gene3D G3DSA:1.10.10.1320 1 108 3.9E-15 T 14-10-2018 VV1_1815 6513be95f39d682fcf68837921565b64 222 SUPERFAMILY SSF51182 112 206 1.3E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV1_1956 1da0539f363b9696bde9677becc17d5d 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 38.622 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV1_1956 1da0539f363b9696bde9677becc17d5d 376 PIRSF PIRSF000876 1 374 2.0E-126 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV1_1956 1da0539f363b9696bde9677becc17d5d 376 Gene3D G3DSA:3.40.50.180 183 372 1.3E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VV1_1956 1da0539f363b9696bde9677becc17d5d 376 Gene3D G3DSA:3.40.50.2300 2 130 6.7E-31 T 14-10-2018 VV1_1956 1da0539f363b9696bde9677becc17d5d 376 SMART SM00448 3 126 2.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1956 1da0539f363b9696bde9677becc17d5d 376 SUPERFAMILY SSF52172 2 109 1.39E-26 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1956 1da0539f363b9696bde9677becc17d5d 376 Pfam PF00072 Response regulator receiver domain 5 109 6.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1956 1da0539f363b9696bde9677becc17d5d 376 SUPERFAMILY SSF52738 185 370 1.7E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VV1_1956 1da0539f363b9696bde9677becc17d5d 376 Pfam PF01339 CheB methylesterase 191 368 4.8E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 PIRSF PIRSF000103 1 302 1.8E-77 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 Gene3D G3DSA:3.40.50.720 1 167 4.4E-57 T 14-10-2018 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 Gene3D G3DSA:1.10.1040.10 169 302 1.5E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 SUPERFAMILY SSF51735 3 167 4.36E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 296 1.5E-124 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 3.9E-29 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 SUPERFAMILY SSF48179 168 298 5.78E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV2_0489 f41c2c80d65460ec37f95e723d23b5c7 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 8.5E-55 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.1E-44 T 14-10-2018 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 360 1.8E-31 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 SUPERFAMILY SSF52540 34 222 2.0E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Gene3D G3DSA:3.40.50.300 13 177 7.6E-102 T 14-10-2018 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Gene3D G3DSA:3.30.300.150 578 716 1.6E-40 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Gene3D G3DSA:1.10.8.60 8 240 7.6E-102 T 14-10-2018 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 593 731 3.5E-50 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 SMART SM00382 37 179 2.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 519 591 3.0E-21 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 Gene3D G3DSA:1.20.272.10 242 361 4.0E-40 T 14-10-2018 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.8E-132 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VV1_2003 4ea92e94a8c02e80251ccbd88c253ee7 734 SUPERFAMILY SSF48019 243 362 5.78E-33 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.713 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.6E-53 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.3E-63 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 Gene3D G3DSA:1.10.520.20 2 106 2.2E-37 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 SUPERFAMILY SSF47928 4 105 2.62E-28 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1018 c7d286438abad2d6719cfea0e1aa8e3e 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.6E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 Pfam PF00318 Ribosomal protein S2 9 224 6.1E-93 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.9E-106 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.85 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:1.10.287.610 103 150 4.4E-91 T 14-10-2018 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 SUPERFAMILY SSF52313 6 232 3.92E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 Gene3D G3DSA:3.40.50.10490 8 218 4.4E-91 T 14-10-2018 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1859 41e705eebc3ea5b113708b0bf32bacd6 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 Pfam PF01842 ACT domain 5 52 2.2E-6 T 14-10-2018 IPR002912 ACT domain VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.723 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 Pfam PF00551 Formyl transferase 82 259 2.2E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 SUPERFAMILY SSF55021 4 54 3.04E-8 T 14-10-2018 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 Gene3D G3DSA:3.30.70.260 1 79 1.0E-14 T 14-10-2018 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 PIRSF PIRSF036480 1 277 1.2E-111 T 14-10-2018 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 Gene3D G3DSA:3.40.50.170 81 277 3.2E-67 T 14-10-2018 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 7.7E-65 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 8.5E-122 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VV1_0143 e6b048ae88ef52577a7a24b44087929a 277 SUPERFAMILY SSF53328 82 276 1.31E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1595 984597e5e15a9a19dbde2d45e7c34b49 63 Pfam PF02599 Global regulator protein family 1 52 1.4E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VV1_1595 984597e5e15a9a19dbde2d45e7c34b49 63 Gene3D G3DSA:3.30.70.1680 1 59 9.0E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VV1_1595 984597e5e15a9a19dbde2d45e7c34b49 63 SUPERFAMILY SSF117130 1 54 4.32E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VV1_1595 984597e5e15a9a19dbde2d45e7c34b49 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 1.8E-29 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VV1_1595 984597e5e15a9a19dbde2d45e7c34b49 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 61 17.001 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VV1_1595 984597e5e15a9a19dbde2d45e7c34b49 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VV2_1589 0a14c84846516d73c0df37561e6bf212 161 Gene3D G3DSA:3.10.129.10 2 161 5.3E-43 T 14-10-2018 VV2_1589 0a14c84846516d73c0df37561e6bf212 161 SUPERFAMILY SSF54637 6 154 5.61E-41 T 14-10-2018 IPR029069 HotDog domain superfamily VV2_1589 0a14c84846516d73c0df37561e6bf212 161 Pfam PF03061 Thioesterase superfamily 22 96 2.4E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.456 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 SUPERFAMILY SSF57716 217 268 3.71E-16 T 14-10-2018 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 SUPERFAMILY SSF81624 2 134 7.72E-39 T 14-10-2018 IPR035937 MutM-like, N-terminal VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.5E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 SUPERFAMILY SSF46946 130 221 1.15E-28 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 5.8E-94 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 SMART SM01232 129 221 2.0E-44 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 SMART SM00898 2 115 6.6E-52 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 3.2E-25 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.3E-30 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 Gene3D G3DSA:1.10.8.50 131 269 1.1E-46 T 14-10-2018 VV1_0821 6dff2c26798d17d8469c47dc72b9584e 269 Gene3D G3DSA:3.20.190.10 2 128 9.0E-40 T 14-10-2018 IPR035937 MutM-like, N-terminal VV1_0793 4dedbae560972f5ea4ba7dafc73ff552 243 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 27 235 4.2E-61 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VV1_0793 4dedbae560972f5ea4ba7dafc73ff552 243 Gene3D G3DSA:2.40.360.10 31 242 1.7E-61 T 14-10-2018 IPR023373 YmcC-like superfamily VV1_0793 4dedbae560972f5ea4ba7dafc73ff552 243 SUPERFAMILY SSF159270 32 239 4.18E-56 T 14-10-2018 IPR023373 YmcC-like superfamily VV2_0673 5561843a180e88560e2cc9428836a884 105 Pfam PF08895 Domain of unknown function (DUF1840) 1 102 6.3E-28 T 14-10-2018 IPR014991 Protein of unknown function DUF1840 VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Gene3D G3DSA:3.10.350.10 353 421 9.2E-14 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Gene3D G3DSA:3.10.350.10 422 490 2.3E-14 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 SUPERFAMILY SSF53955 133 288 2.39E-41 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 SUPERFAMILY SSF54106 494 539 5.1E-10 T 14-10-2018 VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Pfam PF01476 LysM domain 439 481 6.5E-12 T 14-10-2018 IPR018392 LysM domain VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Pfam PF01476 LysM domain 365 407 7.4E-10 T 14-10-2018 IPR018392 LysM domain VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Pfam PF01476 LysM domain 496 538 1.1E-11 T 14-10-2018 IPR018392 LysM domain VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 154 182 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Pfam PF01464 Transglycosylase SLT domain 148 247 9.7E-23 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Gene3D G3DSA:3.10.350.10 493 541 6.9E-13 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Pfam PF06474 MltD lipid attachment motif 2 39 5.6E-17 T 14-10-2018 IPR010511 Lytic murein transglycosylase D , lipid attachment domain VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 SMART SM00257 364 407 3.3E-12 T 14-10-2018 IPR018392 LysM domain VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 SMART SM00257 438 482 3.1E-13 T 14-10-2018 IPR018392 LysM domain VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 SMART SM00257 495 539 2.1E-10 T 14-10-2018 IPR018392 LysM domain VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 SUPERFAMILY SSF54106 363 407 2.09E-10 T 14-10-2018 VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 Gene3D G3DSA:1.10.530.10 131 282 2.1E-29 T 14-10-2018 VV1_1882 e1324408ae011bb85dd034ae7cbaf46f 547 SUPERFAMILY SSF54106 437 482 1.96E-10 T 14-10-2018 VV1_1089 1003d8fd6c7cec1e05860480e4c76c35 314 SUPERFAMILY SSF110997 73 145 3.79E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV1_1089 1003d8fd6c7cec1e05860480e4c76c35 314 Pfam PF05036 Sporulation related domain 74 143 2.2E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VV1_0865 452973842df92354f2efe83ed98dd93d 184 Gene3D G3DSA:3.90.79.10 7 183 2.0E-48 T 14-10-2018 VV1_0865 452973842df92354f2efe83ed98dd93d 184 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV1_0865 452973842df92354f2efe83ed98dd93d 184 Pfam PF00293 NUDIX domain 47 155 9.3E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_0865 452973842df92354f2efe83ed98dd93d 184 SUPERFAMILY SSF55811 7 178 2.98E-38 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_0865 452973842df92354f2efe83ed98dd93d 184 PRINTS PR00502 NUDIX hydrolase family signature 89 104 7.3E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_0865 452973842df92354f2efe83ed98dd93d 184 PRINTS PR00502 NUDIX hydrolase family signature 75 89 7.3E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV2_0208 4ffdd24fc7a8c00e876cc3c7dd6be926 433 Gene3D G3DSA:3.40.190.10 135 276 5.6E-21 T 14-10-2018 VV2_0208 4ffdd24fc7a8c00e876cc3c7dd6be926 433 SUPERFAMILY SSF53850 32 290 1.55E-27 T 14-10-2018 VV2_0208 4ffdd24fc7a8c00e876cc3c7dd6be926 433 Pfam PF13343 Bacterial extracellular solute-binding protein 83 295 5.3E-13 T 14-10-2018 VV1_1488 bfd0a177e000bd89125c7b861536e923 135 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 129 9.6E-10 T 14-10-2018 IPR028973 PhnB-like VV1_1488 bfd0a177e000bd89125c7b861536e923 135 SUPERFAMILY SSF54593 1 131 2.67E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_1488 bfd0a177e000bd89125c7b861536e923 135 Gene3D G3DSA:3.10.180.10 8 135 5.1E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_1709 8b95427bc93ebcd2b294565f37f9ca53 302 Pfam PF13176 Tetratricopeptide repeat 240 263 0.029 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1709 8b95427bc93ebcd2b294565f37f9ca53 302 Gene3D G3DSA:1.25.40.10 25 296 9.4E-80 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1709 8b95427bc93ebcd2b294565f37f9ca53 302 SUPERFAMILY SSF48452 34 286 6.88E-69 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1709 8b95427bc93ebcd2b294565f37f9ca53 302 SMART SM00028 237 270 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1709 8b95427bc93ebcd2b294565f37f9ca53 302 SMART SM00028 100 133 0.0011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1709 8b95427bc93ebcd2b294565f37f9ca53 302 SMART SM00028 66 99 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1709 8b95427bc93ebcd2b294565f37f9ca53 302 PIRSF PIRSF004654 1 295 1.0E-87 T 14-10-2018 IPR023605 Lipoprotein NlpI VV2_1381 5facd3d369e0ceb3af1b9e8dd51501e4 404 Gene3D G3DSA:3.90.1260.10 76 361 5.0E-90 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV2_1381 5facd3d369e0ceb3af1b9e8dd51501e4 404 SUPERFAMILY SSF69864 185 379 3.92E-46 T 14-10-2018 VV2_1381 5facd3d369e0ceb3af1b9e8dd51501e4 404 Pfam PF00764 Arginosuccinate synthase 24 371 2.9E-54 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV2_1381 5facd3d369e0ceb3af1b9e8dd51501e4 404 SUPERFAMILY SSF52402 18 172 2.87E-23 T 14-10-2018 VV2_1381 5facd3d369e0ceb3af1b9e8dd51501e4 404 Gene3D G3DSA:3.40.50.620 20 182 5.0E-90 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_2570 945fa7e1d020f17d0084b62d76ac054a 303 Gene3D G3DSA:3.30.420.40 4 297 1.5E-103 T 14-10-2018 VV1_2570 945fa7e1d020f17d0084b62d76ac054a 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 65.686 T 14-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VV1_2570 945fa7e1d020f17d0084b62d76ac054a 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_2570 945fa7e1d020f17d0084b62d76ac054a 303 Gene3D G3DSA:3.30.420.40 119 290 1.5E-103 T 14-10-2018 VV1_2570 945fa7e1d020f17d0084b62d76ac054a 303 SUPERFAMILY SSF53067 1 299 6.49E-57 T 14-10-2018 VV1_2570 945fa7e1d020f17d0084b62d76ac054a 303 Pfam PF00480 ROK family 2 300 3.3E-73 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV2_0716 c52d48d1f326292c7aa72bc9f06b6007 334 SMART SM00448 3 115 4.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0716 c52d48d1f326292c7aa72bc9f06b6007 334 Pfam PF00072 Response regulator receiver domain 5 115 3.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0716 c52d48d1f326292c7aa72bc9f06b6007 334 SUPERFAMILY SSF103039 140 329 1.16E-37 T 14-10-2018 IPR028976 CheC-like superfamily VV2_0716 c52d48d1f326292c7aa72bc9f06b6007 334 Gene3D G3DSA:3.40.50.2300 2 124 2.9E-28 T 14-10-2018 VV2_0716 c52d48d1f326292c7aa72bc9f06b6007 334 SUPERFAMILY SSF52172 4 122 6.26E-28 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0716 c52d48d1f326292c7aa72bc9f06b6007 334 Gene3D G3DSA:3.40.1550.10 139 328 1.0E-30 T 14-10-2018 IPR028976 CheC-like superfamily VV1_2872 e66f95db34cc03a19dcc1f693eb39680 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.4E-171 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VV1_2872 e66f95db34cc03a19dcc1f693eb39680 402 SUPERFAMILY SSF53383 21 388 2.02E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2872 e66f95db34cc03a19dcc1f693eb39680 402 PIRSF PIRSF001434 1 391 1.8E-124 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VV1_2872 e66f95db34cc03a19dcc1f693eb39680 402 Gene3D G3DSA:3.40.640.10 3 255 1.0E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2872 e66f95db34cc03a19dcc1f693eb39680 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VV1_2872 e66f95db34cc03a19dcc1f693eb39680 402 Gene3D G3DSA:3.90.1150.10 256 390 2.5E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2872 e66f95db34cc03a19dcc1f693eb39680 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 388 1.5E-116 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VV2_0239 11a2ce0167c92212d714cf5209813e89 324 Pfam PF03741 Integral membrane protein TerC family 71 272 6.0E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VV2_0239 11a2ce0167c92212d714cf5209813e89 324 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 2 304 2.1E-104 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 SUPERFAMILY SSF51735 4 195 2.36E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 4.3E-63 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 84.265 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 1.4E-114 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 Gene3D G3DSA:3.40.50.720 5 180 1.3E-58 T 14-10-2018 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 Gene3D G3DSA:3.30.360.10 181 489 3.0E-124 T 14-10-2018 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 3.5E-202 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 3.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 3.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 3.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 3.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 3.4E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 SUPERFAMILY SSF55347 182 490 4.58E-113 T 14-10-2018 VV1_2684 6964a1e8ccc3e5393c2f42270f87f9ac 501 PIRSF PIRSF000110 2 490 1.9E-176 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VV1_0526 726a9ab821f24cc846a49561158a8964 510 Gene3D G3DSA:2.40.50.140 10 155 2.4E-28 T 14-10-2018 VV1_0526 726a9ab821f24cc846a49561158a8964 510 Gene3D G3DSA:3.30.930.10 156 506 2.1E-130 T 14-10-2018 VV1_0526 726a9ab821f24cc846a49561158a8964 510 SUPERFAMILY SSF55681 161 507 1.71E-118 T 14-10-2018 VV1_0526 726a9ab821f24cc846a49561158a8964 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.196 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0526 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 7.7E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0526 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 7.7E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0526 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 7.7E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0526 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 7.7E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0526 726a9ab821f24cc846a49561158a8964 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 7.7E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0526 726a9ab821f24cc846a49561158a8964 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 3.7E-199 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VV1_0526 726a9ab821f24cc846a49561158a8964 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 7.1E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV1_0526 726a9ab821f24cc846a49561158a8964 510 SUPERFAMILY SSF50249 16 154 1.27E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0526 726a9ab821f24cc846a49561158a8964 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 7.4E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV2_1492 b7c7dc2287eb7b3a8ad13027bcd5eb64 94 Gene3D G3DSA:1.10.1220.10 2 91 5.3E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VV2_1492 b7c7dc2287eb7b3a8ad13027bcd5eb64 94 Pfam PF04221 RelB antitoxin 5 44 4.8E-5 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ VV2_0701 043ad4bbaf6898a20126edd35d9f7bb8 502 SUPERFAMILY SSF56601 40 383 7.57E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV2_0701 043ad4bbaf6898a20126edd35d9f7bb8 502 Gene3D G3DSA:3.40.710.10 47 384 6.8E-72 T 14-10-2018 VV2_0701 043ad4bbaf6898a20126edd35d9f7bb8 502 Pfam PF00144 Beta-lactamase 52 372 3.9E-51 T 14-10-2018 IPR001466 Beta-lactamase-related VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 SUPERFAMILY SSF56784 1 267 3.33E-77 T 14-10-2018 IPR036412 HAD-like superfamily VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.8E-67 T 14-10-2018 VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 5.3E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 Gene3D G3DSA:3.40.50.1000 3 263 1.3E-80 T 14-10-2018 IPR023214 HAD superfamily VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 5.7E-62 T 14-10-2018 IPR000150 Cof family GO:0016787 VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 Gene3D G3DSA:3.30.1240.10 86 191 1.3E-80 T 14-10-2018 VV1_2722 b5196650386fdc1d63137d1caa29f67d 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 VV2_0031 9f3784d15ce066a6679a52a939a4ddc8 423 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 1.8E-64 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 VV2_0031 9f3784d15ce066a6679a52a939a4ddc8 423 Pfam PF02308 MgtC family 17 141 9.1E-19 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 Gene3D G3DSA:3.40.50.300 1 200 6.5E-69 T 14-10-2018 VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 Pfam PF00271 Helicase conserved C-terminal domain 216 324 3.5E-19 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 Pfam PF00270 DEAD/DEAH box helicase 21 180 6.6E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 SMART SM00490 244 325 4.8E-25 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 Gene3D G3DSA:3.40.50.300 202 387 2.1E-47 T 14-10-2018 VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 Pfam PF16124 RecQ zinc-binding 511 558 3.9E-8 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 SUPERFAMILY SSF52540 59 341 1.84E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 349 3.0E-112 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 SMART SM00487 14 210 7.4E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_1831 e157b39e442fe4ab564ea06b7bbcaf2f 639 Gene3D G3DSA:1.10.10.10 499 637 1.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0560 7a783b556f42dc63186f27316afbfb16 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site VV2_0560 7a783b556f42dc63186f27316afbfb16 299 Gene3D G3DSA:1.10.357.140 23 183 1.8E-23 T 14-10-2018 VV2_0560 7a783b556f42dc63186f27316afbfb16 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.418 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VV2_0560 7a783b556f42dc63186f27316afbfb16 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 1.2E-97 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VV2_0560 7a783b556f42dc63186f27316afbfb16 299 Pfam PF01040 UbiA prenyltransferase family 32 277 1.4E-62 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VV1_3034 276dc8d3bb3d140f3fe8a438a6ace6c5 185 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 142 178 3.3E-5 T 14-10-2018 IPR010177 Doubled CXXCH motif VV1_3034 276dc8d3bb3d140f3fe8a438a6ace6c5 185 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 33 179 5.5E-66 T 14-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 VV1_3034 276dc8d3bb3d140f3fe8a438a6ace6c5 185 SUPERFAMILY SSF48695 7 183 1.59E-26 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV1_3034 276dc8d3bb3d140f3fe8a438a6ace6c5 185 Pfam PF13435 Cytochrome c554 and c-prime 25 78 8.4E-4 T 14-10-2018 IPR023155 Cytochrome c-552/4 VV1_3034 276dc8d3bb3d140f3fe8a438a6ace6c5 185 Gene3D G3DSA:3.90.10.10 16 131 1.3E-5 T 14-10-2018 VV1_3034 276dc8d3bb3d140f3fe8a438a6ace6c5 185 Gene3D G3DSA:3.90.10.10 132 184 2.7E-6 T 14-10-2018 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.4E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 Gene3D G3DSA:2.40.10.10 31 142 1.4E-32 T 14-10-2018 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 Pfam PF13180 PDZ domain 258 347 3.2E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 7.0E-168 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 SMART SM00228 257 339 6.3E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 Pfam PF13365 Trypsin-like peptidase domain 82 216 8.3E-33 T 14-10-2018 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 SUPERFAMILY SSF50494 43 266 2.03E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 Gene3D G3DSA:2.30.42.10 257 354 2.1E-24 T 14-10-2018 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 SUPERFAMILY SSF50156 240 347 6.97E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV1_0604 1dbe864d512e4829ca33d1e525a3192b 355 Gene3D G3DSA:2.40.10.10 143 256 1.3E-36 T 14-10-2018 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 SUPERFAMILY SSF48452 38 199 1.29E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 Gene3D G3DSA:1.25.40.10 37 243 9.1E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 Pfam PF14559 Tetratricopeptide repeat 152 199 1.2E-6 T 14-10-2018 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 Pfam PF13431 Tetratricopeptide repeat 94 125 1.4E-7 T 14-10-2018 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 38 71 33.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 142 175 4.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 72 105 0.65 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 SMART SM00028 106 139 41.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_2773 be0d1989d484c395a7629f1d532f2755 244 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 1.3E-87 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW VV1_3107 77615855ae81d0bed0a6f769b4198083 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 195 6.3E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 SUPERFAMILY SSF54719 89 198 7.59E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 8 87 1.4E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 SUPERFAMILY SSF46609 5 88 8.12E-36 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 PIRSF PIRSF000349 1 199 1.7E-84 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 Gene3D G3DSA:2.40.500.20 88 199 1.6E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.6E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 1.6E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 PRINTS PR01703 Manganese superoxide dismutase signature 32 45 1.6E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 PRINTS PR01703 Manganese superoxide dismutase signature 11 22 1.6E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 PRINTS PR01703 Manganese superoxide dismutase signature 70 83 1.6E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 Gene3D G3DSA:1.10.287.990 25 87 2.1E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV1_3107 77615855ae81d0bed0a6f769b4198083 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VV2_0157 28e63a4c65a64435b1964bf4eada0537 362 Pfam PF00092 von Willebrand factor type A domain 107 297 2.1E-25 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_0157 28e63a4c65a64435b1964bf4eada0537 362 SUPERFAMILY SSF53300 103 300 9.94E-36 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0157 28e63a4c65a64435b1964bf4eada0537 362 Gene3D G3DSA:3.40.50.410 105 304 6.0E-50 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0157 28e63a4c65a64435b1964bf4eada0537 362 SMART SM00327 105 304 8.7E-25 T 14-10-2018 IPR002035 von Willebrand factor, type A VV1_1801 444ec3ab8ddfc3b41174c865da398344 367 Gene3D G3DSA:2.40.240.50 119 257 1.2E-133 T 14-10-2018 VV1_1801 444ec3ab8ddfc3b41174c865da398344 367 SUPERFAMILY SSF50685 20 350 5.93E-100 T 14-10-2018 IPR036908 RlpA-like domain superfamily VV1_1801 444ec3ab8ddfc3b41174c865da398344 367 SMART SM00925 119 252 6.9E-62 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VV1_1801 444ec3ab8ddfc3b41174c865da398344 367 Pfam PF03562 MltA specific insert domain 107 252 1.1E-35 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VV1_1801 444ec3ab8ddfc3b41174c865da398344 367 Pfam PF06725 3D domain 272 348 1.9E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VV1_1801 444ec3ab8ddfc3b41174c865da398344 367 Gene3D G3DSA:2.40.40.10 51 348 1.2E-133 T 14-10-2018 IPR036908 RlpA-like domain superfamily VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 Gene3D G3DSA:2.60.40.3470 27 142 3.2E-14 T 14-10-2018 VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 Pfam PF00263 Bacterial type II and III secretion system protein 434 592 1.9E-45 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 161 592 2.2E-162 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 Pfam PF07660 Secretin and TonB N terminus short domain 186 234 8.7E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 Gene3D G3DSA:3.30.1370.120 258 321 3.0E-11 T 14-10-2018 IPR038591 NolW-like superfamily VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 430 454 9.4E-21 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 575 9.4E-21 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 465 475 9.4E-21 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 325 335 9.4E-21 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 PRINTS PR00811 Bacterial general secretion pathway protein D signature 580 594 9.4E-21 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 538 571 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 SMART SM00965 186 234 7.2E-10 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 Gene3D G3DSA:3.55.50.30 143 257 3.2E-38 T 14-10-2018 VV1_1381 2ed84ad5fc332770fb85375550e3fb6c 594 Pfam PF03958 Bacterial type II/III secretion system short domain 260 325 1.6E-11 T 14-10-2018 IPR005644 NolW-like VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 Pfam PF14450 Cell division protein FtsA 207 381 1.9E-24 T 14-10-2018 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 198 384 3.02E-46 T 14-10-2018 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.0E-150 T 14-10-2018 IPR020823 Cell division protein FtsA VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 PIRSF PIRSF003101 1 420 5.8E-147 T 14-10-2018 IPR020823 Cell division protein FtsA VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 SUPERFAMILY SSF53067 8 221 1.71E-59 T 14-10-2018 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.90.640.10 235 300 8.4E-112 T 14-10-2018 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 13 379 8.4E-112 T 14-10-2018 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.420.40 197 359 8.4E-112 T 14-10-2018 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 Gene3D G3DSA:3.30.1490.110 87 169 8.4E-112 T 14-10-2018 VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.297 T 14-10-2018 IPR020823 Cell division protein FtsA VV1_0574 d0dec83904f7f6393afa5c6d9be114a5 420 SMART SM00842 10 196 3.3E-94 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VV2_0104 b90ec7821cf06a5aab16969db0a21fef 224 SUPERFAMILY SSF52172 1 131 1.85E-28 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0104 b90ec7821cf06a5aab16969db0a21fef 224 Gene3D G3DSA:3.40.50.12740 2 203 1.1E-24 T 14-10-2018 VV2_0104 b90ec7821cf06a5aab16969db0a21fef 224 Pfam PF00072 Response regulator receiver domain 4 114 1.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0104 b90ec7821cf06a5aab16969db0a21fef 224 PIRSF PIRSF006171 1 222 1.2E-65 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VV2_0104 b90ec7821cf06a5aab16969db0a21fef 224 SMART SM00448 2 115 2.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 SMART SM00487 20 229 1.6E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 Gene3D G3DSA:3.40.50.300 221 425 2.9E-48 T 14-10-2018 VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 SMART SM00490 258 339 9.2E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 Gene3D G3DSA:3.40.50.300 1 220 6.1E-75 T 14-10-2018 VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 SUPERFAMILY SSF52540 75 356 4.82E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 Pfam PF00270 DEAD/DEAH box helicase 25 195 8.7E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_0382 b4396b68960a654655dd57acb8ac8c47 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV1_0265 46d94565b899e9306703bcff41753a67 406 Gene3D G3DSA:3.30.9.50 104 290 3.6E-98 T 14-10-2018 VV1_0265 46d94565b899e9306703bcff41753a67 406 Pfam PF01494 FAD binding domain 175 333 8.6E-20 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VV1_0265 46d94565b899e9306703bcff41753a67 406 SUPERFAMILY SSF51905 27 399 6.24E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0265 46d94565b899e9306703bcff41753a67 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 1.6E-18 T 14-10-2018 VV1_0265 46d94565b899e9306703bcff41753a67 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 332 1.6E-18 T 14-10-2018 VV1_0265 46d94565b899e9306703bcff41753a67 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 29 51 1.6E-18 T 14-10-2018 VV1_0265 46d94565b899e9306703bcff41753a67 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 316 1.6E-18 T 14-10-2018 VV1_0265 46d94565b899e9306703bcff41753a67 406 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 29 405 8.1E-112 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VV1_0265 46d94565b899e9306703bcff41753a67 406 Gene3D G3DSA:3.50.50.60 29 352 3.6E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0679 dfe70747ec4dca2a4c410b589cb0fb46 421 Gene3D G3DSA:3.65.10.10 22 229 1.2E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VV1_0679 dfe70747ec4dca2a4c410b589cb0fb46 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.595 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_0679 dfe70747ec4dca2a4c410b589cb0fb46 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 1.6E-122 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VV1_0679 dfe70747ec4dca2a4c410b589cb0fb46 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.9E-182 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_0679 dfe70747ec4dca2a4c410b589cb0fb46 421 SUPERFAMILY SSF55205 6 418 2.78E-142 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VV1_0679 dfe70747ec4dca2a4c410b589cb0fb46 421 Gene3D G3DSA:3.65.10.10 12 414 1.2E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VV1_2871 0efc6c18c120aca052805e219209af9e 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.604 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VV1_2871 0efc6c18c120aca052805e219209af9e 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 1.8E-149 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VV1_2871 0efc6c18c120aca052805e219209af9e 484 Gene3D G3DSA:3.30.870.10 314 456 9.0E-24 T 14-10-2018 VV1_2871 0efc6c18c120aca052805e219209af9e 484 SMART SM00155 397 424 1.9E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_2871 0efc6c18c120aca052805e219209af9e 484 SMART SM00155 219 246 4.0E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_2871 0efc6c18c120aca052805e219209af9e 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 3.9E-6 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal VV1_2871 0efc6c18c120aca052805e219209af9e 484 Gene3D G3DSA:3.30.870.10 116 307 2.5E-37 T 14-10-2018 VV1_2871 0efc6c18c120aca052805e219209af9e 484 PIRSF PIRSF000850 384 474 0.87 T 14-10-2018 VV1_2871 0efc6c18c120aca052805e219209af9e 484 PIRSF PIRSF000850 108 252 26.0 T 14-10-2018 VV1_2871 0efc6c18c120aca052805e219209af9e 484 PIRSF PIRSF000850 287 376 0.0075 T 14-10-2018 VV1_2871 0efc6c18c120aca052805e219209af9e 484 Pfam PF13091 PLD-like domain 325 448 1.8E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_2871 0efc6c18c120aca052805e219209af9e 484 Pfam PF13091 PLD-like domain 135 266 3.5E-16 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_2871 0efc6c18c120aca052805e219209af9e 484 SUPERFAMILY SSF56024 273 469 3.36E-47 T 14-10-2018 VV1_2871 0efc6c18c120aca052805e219209af9e 484 SUPERFAMILY SSF56024 67 313 1.84E-50 T 14-10-2018 VV1_1969 8dbba885c9ef2bb461a46c046b3418e8 404 SUPERFAMILY SSF48452 161 266 2.6E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1969 8dbba885c9ef2bb461a46c046b3418e8 404 Pfam PF14559 Tetratricopeptide repeat 176 244 3.5E-8 T 14-10-2018 VV1_1969 8dbba885c9ef2bb461a46c046b3418e8 404 Gene3D G3DSA:1.25.40.10 153 294 3.8E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1969 8dbba885c9ef2bb461a46c046b3418e8 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 5.1E-32 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.414 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 203 6.4E-72 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 PIRSF PIRSF016262 1 217 7.2E-63 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 2.4E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 3.0E-25 T 14-10-2018 VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 SUPERFAMILY SSF55681 3 205 6.55E-71 T 14-10-2018 VV1_0283 8f626a3091c4810b8a4a8c241eb9e6c2 218 Gene3D G3DSA:3.30.930.10 1 203 2.4E-64 T 14-10-2018 VV2_0102 01071f918bebc0451495189203a38bd7 467 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 467 4.0E-139 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV2_0102 01071f918bebc0451495189203a38bd7 467 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 22 461 2.6E-116 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV2_0102 01071f918bebc0451495189203a38bd7 467 PIRSF PIRSF002457 2 467 4.0E-138 T 14-10-2018 IPR030676 Citrate carrier CitT-related VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 SMART SM00448 1 112 1.7E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 SUPERFAMILY SSF46894 119 217 3.12E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 Pfam PF00072 Response regulator receiver domain 3 113 3.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 Gene3D G3DSA:3.40.50.2300 1 122 6.0E-37 T 14-10-2018 VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 SMART SM00862 145 216 3.3E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 Gene3D G3DSA:1.10.10.10 123 219 8.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2847 745972a3a78ce06b1d179aa63a3afdce 219 SUPERFAMILY SSF52172 1 133 2.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0959 5596b3d86701308669128ab1c5f71f91 176 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.9E-24 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VV1_0194 aacd03a1c8caba789206b83cfdc3037b 185 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 4 171 1.2E-32 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VV1_0194 aacd03a1c8caba789206b83cfdc3037b 185 SUPERFAMILY SSF56300 4 165 8.05E-36 T 14-10-2018 VV1_0194 aacd03a1c8caba789206b83cfdc3037b 185 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 164 1.4E-24 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VV1_0194 aacd03a1c8caba789206b83cfdc3037b 185 Gene3D G3DSA:3.60.21.10 2 184 1.3E-61 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 Pfam PF03466 LysR substrate binding domain 91 292 2.2E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF53850 91 321 5.07E-41 T 14-10-2018 VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 167 267 7.8E-98 T 14-10-2018 VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:1.10.10.10 1 86 3.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 SUPERFAMILY SSF46785 1 113 7.07E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2954 f8fa0545412bf38a9cefd076dcc042e2 324 Gene3D G3DSA:3.40.190.10 93 303 7.8E-98 T 14-10-2018 VV1_2526 564d8cd1f22df1fb4cb2317971bde897 80 SUPERFAMILY SSF47598 4 46 1.78E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VV1_2526 564d8cd1f22df1fb4cb2317971bde897 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 3.8E-38 T 14-10-2018 IPR022789 Antitoxin ParD VV1_2526 564d8cd1f22df1fb4cb2317971bde897 80 Gene3D G3DSA:1.10.8.1250 10 80 1.3E-25 T 14-10-2018 IPR038296 Antitoxin ParD superfamily VV1_2526 564d8cd1f22df1fb4cb2317971bde897 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 1.6E-30 T 14-10-2018 IPR022789 Antitoxin ParD VV2_0720 ae8a285477534e0d96dc660498e98b7b 101 Gene3D G3DSA:3.30.70.920 6 75 1.7E-22 T 14-10-2018 VV2_0720 ae8a285477534e0d96dc660498e98b7b 101 Pfam PF03927 NapD protein 6 80 2.1E-28 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VV2_0720 ae8a285477534e0d96dc660498e98b7b 101 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.281 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VV1_0952 3d8af052dd0d002d77036f37508f2606 291 Hamap MF_00697 UPF0276 protein . 10 282 45.587 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 VV1_0952 3d8af052dd0d002d77036f37508f2606 291 Pfam PF05114 Protein of unknown function (DUF692) 10 274 6.1E-107 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 VV1_0952 3d8af052dd0d002d77036f37508f2606 291 Gene3D G3DSA:3.20.20.150 7 283 7.0E-88 T 14-10-2018 VV1_0952 3d8af052dd0d002d77036f37508f2606 291 SUPERFAMILY SSF51658 29 255 1.08E-6 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VV2_1326 ce1c89f0a1b117e0563400efc1e32e37 324 Pfam PF13407 Periplasmic binding protein domain 27 296 8.6E-57 T 14-10-2018 IPR025997 Periplasmic binding protein VV2_1326 ce1c89f0a1b117e0563400efc1e32e37 324 SUPERFAMILY SSF53822 23 323 1.56E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_1326 ce1c89f0a1b117e0563400efc1e32e37 324 Gene3D G3DSA:3.40.50.2300 27 299 3.7E-111 T 14-10-2018 VV2_1326 ce1c89f0a1b117e0563400efc1e32e37 324 Gene3D G3DSA:3.40.50.2300 132 276 3.7E-111 T 14-10-2018 VV1_3043 9795ab53138a60c20324b9f14f413c8f 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV1_3043 9795ab53138a60c20324b9f14f413c8f 92 SUPERFAMILY SSF54292 4 85 9.7E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV1_3043 9795ab53138a60c20324b9f14f413c8f 92 Gene3D G3DSA:3.10.20.30 3 90 1.3E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_3043 9795ab53138a60c20324b9f14f413c8f 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 4.5E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 129 7.3E-23 T 14-10-2018 IPR029095 NarX-like, N-terminal VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 SUPERFAMILY SSF55874 445 561 1.7E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 PIRSF PIRSF003167 2 311 2.7E-76 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 PIRSF PIRSF003167 298 570 1.4E-101 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 562 1.3E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 Gene3D G3DSA:1.20.120.960 40 148 1.9E-12 T 14-10-2018 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 SMART SM00387 474 567 3.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 Gene3D G3DSA:3.30.565.10 434 567 2.2E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 Gene3D G3DSA:1.10.287.130 173 287 1.9E-7 T 14-10-2018 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 SUPERFAMILY SSF158472 176 225 8.63E-8 T 14-10-2018 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF00672 HAMP domain 176 223 2.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 SMART SM00304 176 228 1.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0719 84419ca3eb7b7d6a19e4282526875f81 571 Pfam PF07730 Histidine kinase 365 433 6.1E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VV2_0924 824f237cf797a06da9ff9f05f2d18a13 172 Gene3D G3DSA:3.40.630.30 11 150 9.8E-20 T 14-10-2018 VV2_0924 824f237cf797a06da9ff9f05f2d18a13 172 SUPERFAMILY SSF55729 40 148 3.21E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0924 824f237cf797a06da9ff9f05f2d18a13 172 Pfam PF00583 Acetyltransferase (GNAT) family 42 127 6.8E-14 T 14-10-2018 IPR000182 GNAT domain VV1_2631 bd060643a55246eabf527b4992a94e79 568 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 548 568 0.0016 T 14-10-2018 IPR020008 GlyGly-CTERM domain VV1_2631 bd060643a55246eabf527b4992a94e79 568 Pfam PF11949 Protein of unknown function (DUF3466) 7 179 4.4E-11 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VV1_2631 bd060643a55246eabf527b4992a94e79 568 Pfam PF11949 Protein of unknown function (DUF3466) 232 568 1.1E-55 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 PIRSF PIRSF037565 1 376 4.7E-175 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 50.001 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 Pfam PF05175 Methyltransferase small domain 200 373 2.0E-52 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 Gene3D G3DSA:3.40.50.150 8 182 5.5E-53 T 14-10-2018 VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 Pfam PF08468 Methyltransferase small domain N-terminal 49 168 2.0E-5 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 SUPERFAMILY SSF53335 193 355 2.71E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1819 7c166e55175cf4c164c15c500e5b1a58 376 Gene3D G3DSA:3.40.50.150 186 376 4.8E-48 T 14-10-2018 VV1_0030 0259835cb1a4332a79cc36fcf5f62e9a 332 Gene3D G3DSA:3.40.190.170 27 328 1.4E-91 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VV1_0030 0259835cb1a4332a79cc36fcf5f62e9a 332 PIRSF PIRSF006470 1 332 2.7E-121 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VV1_0030 0259835cb1a4332a79cc36fcf5f62e9a 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 1.1E-78 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VV1_0030 0259835cb1a4332a79cc36fcf5f62e9a 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.1E-104 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VV2_0457 c874729a8796bcaa2a90b5b837eef55a 197 Gene3D G3DSA:3.40.50.150 3 178 1.4E-27 T 14-10-2018 VV2_0457 c874729a8796bcaa2a90b5b837eef55a 197 Pfam PF08242 Methyltransferase domain 45 139 3.8E-13 T 14-10-2018 IPR013217 Methyltransferase type 12 VV2_0457 c874729a8796bcaa2a90b5b837eef55a 197 SUPERFAMILY SSF53335 9 183 4.45E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52440 556 675 3.02E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.1380 937 1072 3.5E-33 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.470.20 665 934 3.9E-125 T 14-10-2018 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52440 1 127 3.17E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF56059 673 932 3.54E-104 T 14-10-2018 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.107 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.30.470.20 119 403 3.7E-129 T 14-10-2018 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 14-10-2018 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF48108 397 554 3.01E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.20 1 116 8.1E-51 T 14-10-2018 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SMART SM01096 424 547 5.8E-76 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:3.40.50.20 554 662 2.6E-49 T 14-10-2018 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02142 MGS-like domain 956 1041 1.5E-15 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SMART SM00851 955 1041 2.0E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.389 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.1E-41 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.2E-37 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 Gene3D G3DSA:1.10.1030.10 404 553 6.7E-53 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VV1_0565 f98cba2fdf6b9af53f5f65ced5bde0bd 1077 SUPERFAMILY SSF52335 936 1071 2.62E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VV1_2028 ab2775aaa77546632e7a346af0deb7fc 300 Pfam PF13280 WYL domain 123 291 1.9E-9 T 14-10-2018 IPR026881 WYL domain VV1_2028 ab2775aaa77546632e7a346af0deb7fc 300 PIRSF PIRSF015558 4 300 6.0E-105 T 14-10-2018 IPR016634 WYL domain protein, s026 type VV2_0411 377d5703cfbeefae622424c258898a3a 459 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 59 445 2.1E-144 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VV2_0411 377d5703cfbeefae622424c258898a3a 459 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 455 2.1E-125 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Pfam PF13361 UvrD-like helicase C-terminal domain 457 831 4.0E-19 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Pfam PF12705 PD-(D/E)XK nuclease superfamily 979 1177 2.7E-8 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 SUPERFAMILY SSF52980 924 1205 5.36E-84 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Pfam PF00580 UvrD/REP helicase N-terminal domain 31 452 8.1E-60 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Gene3D G3DSA:3.40.50.300 25 452 2.3E-160 T 14-10-2018 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 SUPERFAMILY SSF52540 30 863 3.65E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Gene3D G3DSA:1.10.3170.10 173 365 2.3E-160 T 14-10-2018 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Gene3D G3DSA:1.10.486.10 602 750 2.3E-159 T 14-10-2018 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Gene3D G3DSA:3.40.50.300 461 867 2.3E-159 T 14-10-2018 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Gene3D G3DSA:3.90.320.10 912 1209 4.3E-99 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 23 1204 22.879 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VV1_1796 fb29210d1fade8ba2a8b756e0754edab 1221 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 26 1203 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 SUPERFAMILY SSF50891 19 180 9.35E-55 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 PIRSF PIRSF001467 5 179 2.5E-24 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 Gene3D G3DSA:2.40.100.10 18 181 1.1E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 7.0E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 7.0E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 7.0E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV1_1817 7d08e5864f117bc888207c3e1f90d555 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 1.1E-44 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VV2_1159 f06d0986f07b66af5cb8545019cd8d28 99 SUPERFAMILY SSF52091 7 98 1.28E-21 T 14-10-2018 IPR036513 STAS domain superfamily VV2_1159 f06d0986f07b66af5cb8545019cd8d28 99 Gene3D G3DSA:3.30.750.24 3 99 3.8E-19 T 14-10-2018 IPR036513 STAS domain superfamily VV2_1159 f06d0986f07b66af5cb8545019cd8d28 99 Pfam PF01740 STAS domain 6 96 2.7E-10 T 14-10-2018 IPR002645 STAS domain VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 Gene3D G3DSA:1.10.10.10 1 69 2.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 Pfam PF01726 LexA DNA binding domain 1 65 8.3E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.01 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 6.3E-81 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 7.0E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 7.0E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 7.0E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 Gene3D G3DSA:2.10.109.10 85 207 1.0E-44 T 14-10-2018 VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 SUPERFAMILY SSF46785 3 69 3.09E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 SUPERFAMILY SSF51306 81 203 1.92E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VV1_1166 326eb4879f53976aa93c03bb3fdda5ea 207 Pfam PF00717 Peptidase S24-like 119 184 2.3E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VV1_1810 6cb31207a32f8dcd1b2e603462320ce2 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 7.1E-36 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VV1_1810 6cb31207a32f8dcd1b2e603462320ce2 297 SUPERFAMILY SSF48179 168 291 1.09E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_1810 6cb31207a32f8dcd1b2e603462320ce2 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 1.4E-82 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 VV1_1810 6cb31207a32f8dcd1b2e603462320ce2 297 SUPERFAMILY SSF51735 3 166 6.39E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1810 6cb31207a32f8dcd1b2e603462320ce2 297 Gene3D G3DSA:1.10.1040.10 168 297 7.7E-42 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV1_1810 6cb31207a32f8dcd1b2e603462320ce2 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 5.8E-32 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VV1_1810 6cb31207a32f8dcd1b2e603462320ce2 297 Gene3D G3DSA:3.40.50.720 2 167 9.4E-51 T 14-10-2018 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 595 1.4E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 Gene3D G3DSA:3.30.450.20 53 267 1.2E-49 T 14-10-2018 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 SUPERFAMILY SSF58104 320 629 1.57E-76 T 14-10-2018 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 Gene3D G3DSA:1.10.287.950 301 629 9.1E-70 T 14-10-2018 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 SMART SM00304 295 352 2.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 SMART SM00304 387 454 70.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 Pfam PF02743 Cache domain 39 260 3.3E-25 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 Pfam PF00672 HAMP domain 304 348 1.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 SMART SM00283 367 628 8.0E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 Gene3D G3DSA:3.30.450.20 64 171 1.2E-49 T 14-10-2018 VV2_0401 76a6e1caf50458578b6b34f4ad76bdd9 629 SUPERFAMILY SSF103190 77 177 4.71E-8 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_1238 eefb099b7371abb0673995008e4291d6 406 Gene3D G3DSA:1.10.3860.10 3 405 4.6E-71 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV2_1238 eefb099b7371abb0673995008e4291d6 406 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 8.8E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VV2_1238 eefb099b7371abb0673995008e4291d6 406 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.285 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VV2_1238 eefb099b7371abb0673995008e4291d6 406 SUPERFAMILY SSF118215 15 399 5.23E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV2_1238 eefb099b7371abb0673995008e4291d6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 2.4E-13 T 14-10-2018 VV2_1238 eefb099b7371abb0673995008e4291d6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 2.4E-13 T 14-10-2018 VV2_1238 eefb099b7371abb0673995008e4291d6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 2.4E-13 T 14-10-2018 VV2_1238 eefb099b7371abb0673995008e4291d6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 2.4E-13 T 14-10-2018 VV2_1238 eefb099b7371abb0673995008e4291d6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 2.4E-13 T 14-10-2018 VV1_2775 ecc8f208d9b3845533fee0a8bf8a914b 177 Gene3D G3DSA:3.30.2010.10 83 170 8.9E-6 T 14-10-2018 VV1_2775 ecc8f208d9b3845533fee0a8bf8a914b 177 Pfam PF01863 Protein of unknown function DUF45 101 157 1.4E-9 T 14-10-2018 IPR002725 Protein of unknown function DUF45 VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 407 440 7.8E-4 T 14-10-2018 IPR006530 YD repeat VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 504 545 7.5E-4 T 14-10-2018 IPR006530 YD repeat VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 441 472 2.8E-5 T 14-10-2018 IPR006530 YD repeat VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 Gene3D G3DSA:3.90.930.1 430 575 1.0E-11 T 14-10-2018 VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1054 1129 3.5E-28 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 Pfam PF03527 RHS protein 1027 1063 3.9E-16 T 14-10-2018 IPR001826 RHS protein VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 PRINTS PR00394 RHS protein signature 1074 1094 1.5E-12 T 14-10-2018 IPR001826 RHS protein VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 PRINTS PR00394 RHS protein signature 1021 1041 1.5E-12 T 14-10-2018 IPR001826 RHS protein VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 PRINTS PR00394 RHS protein signature 1097 1116 1.5E-12 T 14-10-2018 IPR001826 RHS protein VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 Gene3D G3DSA:2.180.10.10 821 1129 7.9E-42 T 14-10-2018 VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 Pfam PF05593 RHS Repeat 421 457 5.3E-8 T 14-10-2018 IPR031325 RHS repeat VV2_0425 f9c583b23f1c4aced6432f8029f7bdb5 1477 Pfam PF05593 RHS Repeat 311 346 2.2E-7 T 14-10-2018 IPR031325 RHS repeat VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 Gene3D G3DSA:3.30.450.20 67 171 2.8E-44 T 14-10-2018 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 SUPERFAMILY SSF103190 92 181 9.42E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 Pfam PF02743 Cache domain 46 260 1.6E-31 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 492 1.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 1.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 296 1.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 Gene3D G3DSA:1.10.287.950 299 629 1.3E-70 T 14-10-2018 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 Gene3D G3DSA:3.30.450.20 57 271 2.8E-44 T 14-10-2018 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 SMART SM00283 367 628 1.1E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 SUPERFAMILY SSF58104 320 629 1.44E-74 T 14-10-2018 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 SMART SM00304 359 405 87.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 SMART SM00304 298 352 6.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 595 6.5E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1553 c3f1c29e56797d5a58f1a4733a46a4d3 629 Pfam PF00672 HAMP domain 307 347 2.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2882 c3b660b7d96c48c4cea2ce77b4f70e63 320 Gene3D G3DSA:1.10.3720.10 69 308 2.0E-22 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2882 c3b660b7d96c48c4cea2ce77b4f70e63 320 SUPERFAMILY SSF161098 69 298 4.74E-20 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2882 c3b660b7d96c48c4cea2ce77b4f70e63 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.7E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2951 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:3.30.70.920 64 159 2.5E-24 T 14-10-2018 VV1_2951 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_2951 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_2951 a4fc7a799e91ad484a7962701988234f 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_2951 a4fc7a799e91ad484a7962701988234f 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 14-10-2018 VV1_2951 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF54909 74 158 8.98E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_2951 a4fc7a799e91ad484a7962701988234f 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VV1_2951 a4fc7a799e91ad484a7962701988234f 164 Gene3D G3DSA:1.10.10.10 1 63 3.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2951 a4fc7a799e91ad484a7962701988234f 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.5E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV1_2951 a4fc7a799e91ad484a7962701988234f 164 SMART SM00344 12 121 4.3E-55 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV1_2951 a4fc7a799e91ad484a7962701988234f 164 SUPERFAMILY SSF46785 12 70 2.17E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0678 bdb5749d5363dbff680d17cd8c8baf51 241 SUPERFAMILY SSF69593 5 235 8.11E-56 T 14-10-2018 VV1_0678 bdb5749d5363dbff680d17cd8c8baf51 241 Pfam PF01553 Acyltransferase 58 180 2.5E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_0678 bdb5749d5363dbff680d17cd8c8baf51 241 SMART SM00563 67 182 3.7E-39 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_0678 bdb5749d5363dbff680d17cd8c8baf51 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.2E-43 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VV2_0877 76066d6144c273e83ca826d82d9a06da 274 Pfam PF00196 Bacterial regulatory proteins, luxR family 210 264 3.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0877 76066d6144c273e83ca826d82d9a06da 274 SMART SM00421 208 265 3.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0877 76066d6144c273e83ca826d82d9a06da 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 241 253 6.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0877 76066d6144c273e83ca826d82d9a06da 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 225 6.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0877 76066d6144c273e83ca826d82d9a06da 274 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 241 6.9E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0877 76066d6144c273e83ca826d82d9a06da 274 Gene3D G3DSA:1.10.10.10 207 268 5.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0877 76066d6144c273e83ca826d82d9a06da 274 SUPERFAMILY SSF46894 206 268 1.19E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_2700 919e8d6946def6473bbf911337645165 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 4.7E-117 T 14-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family VV1_2700 919e8d6946def6473bbf911337645165 284 Pfam PF12801 4Fe-4S binding domain 174 211 1.9E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2700 919e8d6946def6473bbf911337645165 284 Pfam PF12801 4Fe-4S binding domain 82 127 1.3E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2700 919e8d6946def6473bbf911337645165 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_2700 919e8d6946def6473bbf911337645165 284 SUPERFAMILY SSF54862 93 277 8.37E-21 T 14-10-2018 VV1_2700 919e8d6946def6473bbf911337645165 284 Gene3D G3DSA:3.30.70.3270 207 284 1.4E-7 T 14-10-2018 VV1_2700 919e8d6946def6473bbf911337645165 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 9.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV2_0829 eb7ef1cc275a1d7c9a9472b69f9d4963 231 SUPERFAMILY SSF56214 110 224 8.2E-12 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VV2_0829 eb7ef1cc275a1d7c9a9472b69f9d4963 231 PRINTS PR01399 Enterobactin synthetase component D signature 47 67 1.0E-16 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VV2_0829 eb7ef1cc275a1d7c9a9472b69f9d4963 231 PRINTS PR01399 Enterobactin synthetase component D signature 77 95 1.0E-16 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VV2_0829 eb7ef1cc275a1d7c9a9472b69f9d4963 231 PRINTS PR01399 Enterobactin synthetase component D signature 155 171 1.0E-16 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 VV2_0829 eb7ef1cc275a1d7c9a9472b69f9d4963 231 Gene3D G3DSA:3.90.470.20 28 131 9.0E-7 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VV2_0829 eb7ef1cc275a1d7c9a9472b69f9d4963 231 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 201 5.2E-10 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF116726 390 437 2.75E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Gene3D G3DSA:3.30.70.1450 140 232 1.4E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.0E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.0E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.0E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.0E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.0E-33 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02254 TrkA-N domain 3 116 4.0E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02254 TrkA-N domain 235 350 4.6E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF116726 136 223 1.57E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF51735 1 151 6.55E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02080 TrkA-C domain 390 449 8.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Gene3D G3DSA:3.40.50.720 2 139 7.2E-52 T 14-10-2018 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 SUPERFAMILY SSF51735 232 376 3.02E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Gene3D G3DSA:3.30.70.1450 367 458 9.7E-29 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_1045 5af121d0d00b2a2f87ea8c680f0737e1 458 Gene3D G3DSA:3.40.50.720 233 366 1.7E-37 T 14-10-2018 VV2_0204 9173f5f5db699f53541aecbba31005a6 184 SUPERFAMILY SSF55174 18 92 4.56E-17 T 14-10-2018 VV2_0204 9173f5f5db699f53541aecbba31005a6 184 Pfam PF13275 S4 domain 29 91 5.5E-22 T 14-10-2018 VV2_0204 9173f5f5db699f53541aecbba31005a6 184 Gene3D G3DSA:3.10.290.10 20 93 8.0E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 Pfam PF05134 Type II secretion system (T2SS), protein L 9 240 1.9E-76 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 PIRSF PIRSF015761 22 402 4.2E-31 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 Pfam PF12693 GspL periplasmic domain 245 402 6.1E-54 T 14-10-2018 IPR025691 GspL periplasmic domain VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 Gene3D G3DSA:3.30.420.380 8 237 1.8E-88 T 14-10-2018 VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 401 4.6E-98 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 SUPERFAMILY SSF53067 6 148 1.73E-43 T 14-10-2018 VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 SUPERFAMILY SSF53067 150 238 5.83E-22 T 14-10-2018 VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 Gene3D G3DSA:3.30.1360.100 317 403 6.7E-29 T 14-10-2018 VV1_0869 c041a98737c974f6f1e47287ce201ab4 403 Gene3D G3DSA:3.30.420.370 146 215 1.8E-88 T 14-10-2018 VV2_0177 4390fe293d301d873f4594c1efd9f36f 248 SUPERFAMILY SSF56317 5 241 9.68E-46 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV2_0177 4390fe293d301d873f4594c1efd9f36f 248 Pfam PF00795 Carbon-nitrogen hydrolase 7 241 9.7E-23 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VV2_0177 4390fe293d301d873f4594c1efd9f36f 248 Gene3D G3DSA:3.60.110.10 1 245 1.2E-44 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV2_1662 1e7e036f4557ccdb7005abfab48bb815 271 Gene3D G3DSA:1.10.150.240 24 102 4.0E-96 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VV2_1662 1e7e036f4557ccdb7005abfab48bb815 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 9.4E-118 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VV2_1662 1e7e036f4557ccdb7005abfab48bb815 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 3.3E-9 T 14-10-2018 VV2_1662 1e7e036f4557ccdb7005abfab48bb815 271 SUPERFAMILY SSF56784 6 260 1.12E-53 T 14-10-2018 IPR036412 HAD-like superfamily VV2_1662 1e7e036f4557ccdb7005abfab48bb815 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 6.0E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1662 1e7e036f4557ccdb7005abfab48bb815 271 Gene3D G3DSA:3.40.50.1000 8 271 4.0E-96 T 14-10-2018 IPR023214 HAD superfamily VV2_1662 1e7e036f4557ccdb7005abfab48bb815 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 141.286 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VV2_0487 6fbe29132c683a84897c4d5418f684c2 67 Pfam PF08808 RES domain 2 51 4.8E-6 T 14-10-2018 IPR014914 RES domain VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 SUPERFAMILY SSF54686 3 133 4.58E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 7.5E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.624 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 3.5E-57 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 4.5E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0755 f458c70dc0ff8e2a21cfa6d519da71f3 136 Gene3D G3DSA:3.90.1170.10 1 136 2.1E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_2363 22eda69d8b766c5b353edb2007b3927d 1297 SUPERFAMILY SSF55486 269 652 7.8E-16 T 14-10-2018 VV1_2363 22eda69d8b766c5b353edb2007b3927d 1297 Gene3D G3DSA:3.40.390.10 472 653 2.6E-8 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VV1_2363 22eda69d8b766c5b353edb2007b3927d 1297 Pfam PF16313 Met-zincin 577 799 3.5E-7 T 14-10-2018 IPR032534 Domain of unknown function DUF4953 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 Pfam PF01743 Poly A polymerase head domain 52 181 1.8E-39 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 208 269 2.3E-21 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 453 37.686 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 SUPERFAMILY SSF81301 23 178 2.4E-42 T 14-10-2018 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 Gene3D G3DSA:1.10.3090.10 179 429 7.1E-93 T 14-10-2018 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 327 442 2.4E-37 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 SUPERFAMILY SSF81891 179 391 3.92E-49 T 14-10-2018 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 Gene3D G3DSA:3.30.460.10 18 177 6.4E-64 T 14-10-2018 VV1_1645 aa6289be4485b4ed630ff7a9accf3094 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 448 6.1E-163 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VV2_0598 b013be9ea37de699ee9a410accf63540 308 Pfam PF00005 ABC transporter 22 165 5.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0598 b013be9ea37de699ee9a410accf63540 308 SUPERFAMILY SSF52540 4 227 3.33E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0598 b013be9ea37de699ee9a410accf63540 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0598 b013be9ea37de699ee9a410accf63540 308 SMART SM00382 30 212 3.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0598 b013be9ea37de699ee9a410accf63540 308 Gene3D G3DSA:3.40.50.300 2 240 1.9E-71 T 14-10-2018 VV2_0080 19d1d042917b0abeb5e4dc0842c2e213 1021 SUPERFAMILY SSF52540 26 1000 6.0E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0080 19d1d042917b0abeb5e4dc0842c2e213 1021 Pfam PF13558 Putative exonuclease SbcCD, C subunit 909 971 8.0E-12 T 14-10-2018 VV2_0080 19d1d042917b0abeb5e4dc0842c2e213 1021 Gene3D G3DSA:3.40.50.300 1 237 6.9E-41 T 14-10-2018 VV2_0080 19d1d042917b0abeb5e4dc0842c2e213 1021 Pfam PF13476 AAA domain 5 237 1.3E-25 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain VV2_0080 19d1d042917b0abeb5e4dc0842c2e213 1021 SUPERFAMILY SSF52540 637 1001 9.46E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1579 a839e995071b25adf89e4c1a8298c0a4 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 396 467 9.4E-8 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VV2_1579 a839e995071b25adf89e4c1a8298c0a4 726 Pfam PF13614 AAA domain 552 669 1.4E-10 T 14-10-2018 IPR025669 AAA domain VV2_1579 a839e995071b25adf89e4c1a8298c0a4 726 Gene3D G3DSA:3.40.50.300 462 726 8.3E-68 T 14-10-2018 VV2_1579 a839e995071b25adf89e4c1a8298c0a4 726 Pfam PF02706 Chain length determinant protein 21 106 8.8E-10 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VV2_1579 a839e995071b25adf89e4c1a8298c0a4 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 722 2.1E-42 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VV2_1579 a839e995071b25adf89e4c1a8298c0a4 726 SUPERFAMILY SSF52540 539 715 8.61E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.968 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 7.5E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 PIRSF PIRSF005457 1 252 1.7E-97 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 SMART SM00849 12 166 5.7E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 2.2E-103 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 Gene3D G3DSA:3.60.15.10 1 252 9.2E-93 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.8E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VV1_1883 fb305dbff1f60079b3d6926e4e1d084e 252 SUPERFAMILY SSF56281 2 252 2.88E-70 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.382 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 Gene3D G3DSA:1.10.8.100 200 266 3.1E-24 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 SMART SM00650 25 197 5.1E-89 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 6.2E-88 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 SUPERFAMILY SSF53335 7 264 2.39E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.2E-77 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VV1_0663 dc344f333fbb5b970a06292b25b56b8e 268 Gene3D G3DSA:3.40.50.150 1 198 1.7E-65 T 14-10-2018 VV1_3101 4e07e0b60a5e35722bd510ccbcd48a04 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 1.7E-72 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VV1_3101 4e07e0b60a5e35722bd510ccbcd48a04 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 6.0E-72 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 VV2_0480 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 6.7E-6 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VV2_0480 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 6.7E-6 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VV2_0480 b2241f901f0a02899dfad299521d6b4d 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 6.7E-6 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VV2_0480 b2241f901f0a02899dfad299521d6b4d 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 2.5E-47 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 VV1_1687 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF54534 81 156 7.98E-24 T 14-10-2018 VV1_1687 3447e47c1d4980544692625facd3423f 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.554 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VV1_1687 3447e47c1d4980544692625facd3423f 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 6.5E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VV1_1687 3447e47c1d4980544692625facd3423f 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 5.3E-54 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VV1_1687 3447e47c1d4980544692625facd3423f 157 PIRSF PIRSF006092 1 157 4.4E-48 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VV1_1687 3447e47c1d4980544692625facd3423f 157 SUPERFAMILY SSF46557 2 75 5.49E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VV1_1687 3447e47c1d4980544692625facd3423f 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.2E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VV1_1687 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV1_1687 3447e47c1d4980544692625facd3423f 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VV1_1687 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:1.10.287.180 1 74 7.8E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VV1_1687 3447e47c1d4980544692625facd3423f 157 Gene3D G3DSA:3.10.50.30 75 157 1.1E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VV2_0375 ffac497f6b6ecb443179e3906a9a125d 225 Gene3D G3DSA:3.10.129.10 76 223 5.6E-35 T 14-10-2018 VV2_0375 ffac497f6b6ecb443179e3906a9a125d 225 SUPERFAMILY SSF54637 79 218 2.68E-28 T 14-10-2018 IPR029069 HotDog domain superfamily VV2_0375 ffac497f6b6ecb443179e3906a9a125d 225 Pfam PF01575 MaoC like domain 82 200 1.2E-22 T 14-10-2018 IPR002539 MaoC-like dehydratase domain VV2_0957 826280411c924c13ece3911d1b62a5d0 385 Gene3D G3DSA:1.20.1720.10 7 370 2.9E-71 T 14-10-2018 VV2_0957 826280411c924c13ece3911d1b62a5d0 385 PRINTS PR01035 Tetracycline resistance protein signature 127 149 7.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VV2_0957 826280411c924c13ece3911d1b62a5d0 385 PRINTS PR01035 Tetracycline resistance protein signature 4 20 7.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VV2_0957 826280411c924c13ece3911d1b62a5d0 385 PRINTS PR01035 Tetracycline resistance protein signature 294 314 7.2E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VV2_0957 826280411c924c13ece3911d1b62a5d0 385 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 368 7.7E-61 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VV2_0957 826280411c924c13ece3911d1b62a5d0 385 Pfam PF07690 Major Facilitator Superfamily 19 343 5.9E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0957 826280411c924c13ece3911d1b62a5d0 385 SUPERFAMILY SSF103473 4 370 1.44E-47 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 6.8E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 6.8E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 6.8E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 6.8E-62 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 Gene3D G3DSA:2.40.50.100 76 154 2.5E-32 T 14-10-2018 VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 Pfam PF00364 Biotin-requiring enzyme 79 153 5.6E-25 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VV1_1235 aadfcf8ccf0ce8da2026c180f3ffb324 154 SUPERFAMILY SSF51230 79 154 4.97E-26 T 14-10-2018 IPR011053 Single hybrid motif VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 238 496 2.2E-70 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 12 215 24.922 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 PIRSF PIRSF017184 8 497 6.1E-144 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 Pfam PF01256 Carbohydrate kinase 253 492 2.5E-61 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 Pfam PF03853 YjeF-related protein N-terminus 33 194 2.5E-47 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 SUPERFAMILY SSF64153 10 252 2.88E-65 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 230 496 22.613 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 SUPERFAMILY SSF53613 228 496 2.36E-79 T 14-10-2018 IPR029056 Ribokinase-like VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 14 214 5.0E-53 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 Gene3D G3DSA:3.40.50.10260 6 220 4.0E-63 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 435 445 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site VV2_0714 c986f8f222a3cbafdfa5f573a877397a 498 Gene3D G3DSA:3.40.1190.20 224 497 4.2E-87 T 14-10-2018 IPR029056 Ribokinase-like VV2_1143 9d2ca6f0ef83b9ddd2edc6c936039e0f 352 SUPERFAMILY SSF56935 26 350 1.28E-40 T 14-10-2018 VV2_1143 9d2ca6f0ef83b9ddd2edc6c936039e0f 352 Gene3D G3DSA:2.40.160.10 22 351 6.6E-34 T 14-10-2018 IPR023614 Porin domain superfamily VV2_1184 0106d7c6a5a3e94381ccfae5dc3306a0 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.989 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_1184 0106d7c6a5a3e94381ccfae5dc3306a0 238 Gene3D G3DSA:3.30.70.980 131 202 3.6E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_1184 0106d7c6a5a3e94381ccfae5dc3306a0 238 Pfam PF01709 Transcriptional regulator 5 236 1.1E-73 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_1184 0106d7c6a5a3e94381ccfae5dc3306a0 238 Gene3D G3DSA:1.10.10.200 17 78 3.7E-17 T 14-10-2018 IPR017856 Integrase-like, N-terminal VV2_1184 0106d7c6a5a3e94381ccfae5dc3306a0 238 SUPERFAMILY SSF75625 1 237 5.49E-77 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_1184 0106d7c6a5a3e94381ccfae5dc3306a0 238 Gene3D G3DSA:3.30.70.980 83 235 3.6E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_0002 6218154a90b0f1a5eb66c20210f68700 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 182 1.8E-54 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VV1_0002 6218154a90b0f1a5eb66c20210f68700 328 Gene3D G3DSA:3.30.1220.10 212 325 5.3E-16 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily VV1_0002 6218154a90b0f1a5eb66c20210f68700 328 Gene3D G3DSA:3.40.50.300 5 201 2.0E-64 T 14-10-2018 VV1_0002 6218154a90b0f1a5eb66c20210f68700 328 SUPERFAMILY SSF52540 6 199 1.19E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0002 6218154a90b0f1a5eb66c20210f68700 328 SUPERFAMILY SSF90002 232 324 4.05E-17 T 14-10-2018 VV1_0002 6218154a90b0f1a5eb66c20210f68700 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 232 324 5.1E-19 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VV1_0002 6218154a90b0f1a5eb66c20210f68700 328 SMART SM00833 232 325 3.4E-17 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VV1_2546 80b71db19904991c5f2bd895d25dc6d7 93 SUPERFAMILY SSF143120 10 81 1.03E-16 T 14-10-2018 IPR036165 YefM-like superfamily VV1_2546 80b71db19904991c5f2bd895d25dc6d7 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 1.6E-12 T 14-10-2018 VV1_2546 80b71db19904991c5f2bd895d25dc6d7 93 Gene3D G3DSA:3.40.1620.40 12 74 2.2E-10 T 14-10-2018 VV1_2546 80b71db19904991c5f2bd895d25dc6d7 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 3.3E-16 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VV1_2713 68e135872bf1e87ffe2345330e593112 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 168 376 1.1E-30 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VV1_2713 68e135872bf1e87ffe2345330e593112 397 SUPERFAMILY SSF88697 4 73 2.13E-17 T 14-10-2018 IPR015947 PUA-like superfamily VV1_2713 68e135872bf1e87ffe2345330e593112 397 Gene3D G3DSA:3.40.50.150 181 397 1.3E-68 T 14-10-2018 VV1_2713 68e135872bf1e87ffe2345330e593112 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.24 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 VV1_2713 68e135872bf1e87ffe2345330e593112 397 Gene3D G3DSA:2.30.130.10 1 72 2.4E-28 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 VV1_2713 68e135872bf1e87ffe2345330e593112 397 Gene3D G3DSA:3.30.750.80 73 180 2.2E-36 T 14-10-2018 VV1_2713 68e135872bf1e87ffe2345330e593112 397 SMART SM00359 3 87 3.2E-14 T 14-10-2018 IPR002478 PUA domain GO:0003723 VV1_2713 68e135872bf1e87ffe2345330e593112 397 SUPERFAMILY SSF53335 78 393 7.63E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1946 1688dba375e2077d4a5333347c3ce287 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-28 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV1_1946 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV1_1946 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV1_1946 1688dba375e2077d4a5333347c3ce287 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV1_1946 1688dba375e2077d4a5333347c3ce287 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.9E-33 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VV1_1946 1688dba375e2077d4a5333347c3ce287 89 PIRSF PIRSF004669 1 89 2.3E-30 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VV2_1078 024405343aa971244d5ccbb6f14e78cd 355 SUPERFAMILY SSF56281 35 290 1.09E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1078 024405343aa971244d5ccbb6f14e78cd 355 Gene3D G3DSA:3.60.15.10 3 355 6.9E-110 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1078 024405343aa971244d5ccbb6f14e78cd 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 2.6E-12 T 14-10-2018 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 Gene3D G3DSA:3.20.20.60 6 341 1.8E-154 T 14-10-2018 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 Gene3D G3DSA:2.40.33.10 74 172 1.8E-154 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 4.5E-130 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 SUPERFAMILY SSF50800 74 169 7.15E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 SUPERFAMILY SSF52935 329 480 1.09E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 3.8E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.2E-55 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.7E-167 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 SUPERFAMILY SSF51621 4 345 9.81E-86 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_2992 cdb63c039a02f31e1940b41f21752b3a 482 Gene3D G3DSA:3.40.1380.20 342 476 1.8E-154 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_1380 885acbdb4538752545a3b8cc0a6a4526 170 Gene3D G3DSA:2.30.30.830 90 170 1.1E-23 T 14-10-2018 VV1_1380 885acbdb4538752545a3b8cc0a6a4526 170 PIRSF PIRSF016481 1 170 2.0E-48 T 14-10-2018 IPR007446 Pilus assembly protein PilP VV1_1380 885acbdb4538752545a3b8cc0a6a4526 170 Pfam PF04351 Pilus assembly protein, PilP 24 169 3.2E-40 T 14-10-2018 IPR007446 Pilus assembly protein PilP VV2_1426 f401d2f5baf096c99f785ffeeeac7b65 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.93 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV2_1426 f401d2f5baf096c99f785ffeeeac7b65 218 Gene3D G3DSA:3.90.870.10 6 218 1.4E-88 T 14-10-2018 VV2_1426 f401d2f5baf096c99f785ffeeeac7b65 218 SUPERFAMILY SSF55821 10 213 7.78E-82 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VV2_1426 f401d2f5baf096c99f785ffeeeac7b65 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 1.0E-76 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV2_1426 f401d2f5baf096c99f785ffeeeac7b65 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 4.1E-79 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV2_0064 3f8a5b8659d6ed1aa48f05707296f997 292 Pfam PF13407 Periplasmic binding protein domain 28 277 5.3E-60 T 14-10-2018 IPR025997 Periplasmic binding protein VV2_0064 3f8a5b8659d6ed1aa48f05707296f997 292 Gene3D G3DSA:3.40.50.2300 125 259 2.1E-96 T 14-10-2018 VV2_0064 3f8a5b8659d6ed1aa48f05707296f997 292 Gene3D G3DSA:3.40.50.2300 31 278 2.1E-96 T 14-10-2018 VV2_0064 3f8a5b8659d6ed1aa48f05707296f997 292 SUPERFAMILY SSF53822 8 292 1.18E-86 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_1548 19086210c5b216aff771d51d4cfc7412 676 SUPERFAMILY SSF50993 22 390 4.45E-29 T 14-10-2018 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 582 597 7.2E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 434 452 7.2E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 600 622 7.2E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 460 484 7.2E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 507 7.2E-30 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 16 385 5.1E-30 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 Gene3D G3DSA:3.40.50.1820 24 664 8.6E-149 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_1548 19086210c5b216aff771d51d4cfc7412 676 Gene3D G3DSA:2.130.10.120 75 395 8.6E-149 T 14-10-2018 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 Pfam PF00326 Prolyl oligopeptidase family 449 669 2.8E-61 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VV2_1548 19086210c5b216aff771d51d4cfc7412 676 SUPERFAMILY SSF53474 406 650 2.34E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0268 c2e81efaeeddc2856829f9b684460246 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VV1_0268 c2e81efaeeddc2856829f9b684460246 154 SUPERFAMILY SSF55486 5 149 3.91E-48 T 14-10-2018 VV1_0268 c2e81efaeeddc2856829f9b684460246 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 23.834 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VV1_0268 c2e81efaeeddc2856829f9b684460246 154 Gene3D G3DSA:3.40.390.30 1 154 9.2E-60 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VV1_0268 c2e81efaeeddc2856829f9b684460246 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 3.3E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VV1_0268 c2e81efaeeddc2856829f9b684460246 154 Pfam PF02130 Uncharacterized protein family UPF0054 21 142 8.3E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VV2_0056 e0e2e449ff6b650d38852b89a092a683 481 SMART SM00327 320 479 6.5E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_0056 e0e2e449ff6b650d38852b89a092a683 481 SUPERFAMILY SSF53300 317 471 2.04E-25 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0056 e0e2e449ff6b650d38852b89a092a683 481 Pfam PF05762 VWA domain containing CoxE-like protein 316 448 2.4E-10 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like VV2_0056 e0e2e449ff6b650d38852b89a092a683 481 Gene3D G3DSA:3.40.50.410 322 465 5.7E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV1_0531 98c57f85b601474aa4477a8f9546b5df 172 Gene3D G3DSA:3.40.50.360 1 172 1.5E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_0531 98c57f85b601474aa4477a8f9546b5df 172 PIRSF PIRSF038996 1 172 9.7E-58 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VV1_0531 98c57f85b601474aa4477a8f9546b5df 172 SUPERFAMILY SSF52218 1 169 2.35E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_0531 98c57f85b601474aa4477a8f9546b5df 172 Pfam PF00258 Flavodoxin 5 160 6.5E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV1_0531 98c57f85b601474aa4477a8f9546b5df 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 169 3.7E-67 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 8.2E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 SUPERFAMILY SSF55315 3 77 2.35E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 8.7E-86 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 SUPERFAMILY SSF75217 69 244 6.21E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 Gene3D G3DSA:3.30.1330.30 1 77 2.3E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 5.5E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 Gene3D G3DSA:3.40.1280.10 78 244 8.9E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.65 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VV1_1305 9f198aa56028a5b4711c6f5e7cb67422 247 SMART SM00967 5 81 4.6E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VV1_2667 5f83c6ae86a42eea1b7010c34d9b6f67 392 Gene3D G3DSA:3.40.50.2000 198 358 1.4E-22 T 14-10-2018 VV1_2667 5f83c6ae86a42eea1b7010c34d9b6f67 392 SUPERFAMILY SSF53756 4 369 4.66E-35 T 14-10-2018 VV1_2667 5f83c6ae86a42eea1b7010c34d9b6f67 392 Pfam PF00534 Glycosyl transferases group 1 206 353 1.3E-18 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.7E-80 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 Gene3D G3DSA:3.20.20.60 4 332 6.3E-147 T 14-10-2018 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 SUPERFAMILY SSF52935 323 469 7.85E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.3E-27 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.8E-154 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 Gene3D G3DSA:2.40.33.10 71 167 6.3E-147 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 SUPERFAMILY SSF51621 1 339 1.4E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 SUPERFAMILY SSF50800 70 167 4.88E-29 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 7.9E-186 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV1_0644 e378cf902f1ac7eba8d7e9dd6102a603 470 Gene3D G3DSA:3.40.1380.20 336 467 3.9E-41 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VV2_0660 5f8f2f0c901ec1b1d0971dd16f559c27 92 SUPERFAMILY SSF54060 20 91 3.53E-11 T 14-10-2018 VV2_0945 838891f2f72aa45eacf1fb72d2b811bf 150 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 98 7.6E-14 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VV2_0945 838891f2f72aa45eacf1fb72d2b811bf 150 SUPERFAMILY SSF53146 2 117 1.02E-19 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VV2_0945 838891f2f72aa45eacf1fb72d2b811bf 150 Gene3D G3DSA:3.30.420.130 1 108 2.6E-13 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VV2_0459 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 281 1.1E-26 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV2_0459 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 SUPERFAMILY SSF161111 7 214 2.48E-33 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VV2_0459 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 Gene3D G3DSA:1.20.1510.10 9 214 5.8E-21 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VV2_0459 7f5debf44f1b9009e9d1bfa04a8c6c3c 297 Pfam PF01545 Cation efflux family 14 214 1.8E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV1_2304 ebe70c98d3802bcf4cfad0a922f80eae 174 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 96 3.3E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VV1_2304 ebe70c98d3802bcf4cfad0a922f80eae 174 Gene3D G3DSA:3.10.560.10 14 169 5.9E-22 T 14-10-2018 VV1_2304 ebe70c98d3802bcf4cfad0a922f80eae 174 Gene3D G3DSA:3.30.1950.10 29 100 5.9E-22 T 14-10-2018 VV1_2304 ebe70c98d3802bcf4cfad0a922f80eae 174 Pfam PF10531 SLBB domain 102 145 2.0E-12 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 2.1E-213 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.5E-30 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 6.4E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 SUPERFAMILY SSF55931 102 468 5.4E-140 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 SMART SM01230 102 379 1.7E-155 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 Gene3D G3DSA:3.30.590.10 105 457 8.1E-151 T 14-10-2018 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 SUPERFAMILY SSF54368 3 100 1.26E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV1_0889 8a51775a76da460e6116335bcbdf97da 469 Gene3D G3DSA:3.10.20.70 2 104 3.4E-40 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF07732 Multicopper oxidase 46 157 3.9E-39 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF07731 Multicopper oxidase 359 460 7.6E-26 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 Gene3D G3DSA:2.60.40.420 9 154 9.5E-45 T 14-10-2018 IPR008972 Cupredoxin VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 ProSitePatterns PS00080 Multicopper oxidases signature 2. 443 454 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 SUPERFAMILY SSF49503 313 460 6.27E-34 T 14-10-2018 IPR008972 Cupredoxin VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 26 2.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 SUPERFAMILY SSF49503 160 281 2.06E-16 T 14-10-2018 IPR008972 Cupredoxin VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 SUPERFAMILY SSF49503 32 156 4.08E-39 T 14-10-2018 IPR008972 Cupredoxin VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 Gene3D G3DSA:2.60.40.420 161 294 9.5E-22 T 14-10-2018 IPR008972 Cupredoxin VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 Pfam PF00394 Multicopper oxidase 172 284 9.9E-7 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 VV1_0966 4a5925d2a7b7986246277d68ce66631e 461 Gene3D G3DSA:2.60.40.420 309 461 7.3E-37 T 14-10-2018 IPR008972 Cupredoxin VV2_0872 2f3926752002ac920f589cfa64435ae9 318 SUPERFAMILY SSF53822 23 303 2.88E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_0872 2f3926752002ac920f589cfa64435ae9 318 Gene3D G3DSA:3.40.50.2300 122 263 2.1E-58 T 14-10-2018 VV2_0872 2f3926752002ac920f589cfa64435ae9 318 Gene3D G3DSA:3.40.50.2300 28 280 2.1E-58 T 14-10-2018 VV2_0872 2f3926752002ac920f589cfa64435ae9 318 Pfam PF13407 Periplasmic binding protein domain 24 280 2.5E-44 T 14-10-2018 IPR025997 Periplasmic binding protein VV2_1373 35866873383338c3fc01d151a2032827 242 Gene3D G3DSA:3.40.50.1580 1 241 2.3E-73 T 14-10-2018 VV2_1373 35866873383338c3fc01d151a2032827 242 Pfam PF01048 Phosphorylase superfamily 17 199 1.0E-31 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV2_1373 35866873383338c3fc01d151a2032827 242 SUPERFAMILY SSF53167 4 220 4.58E-68 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VV2_0990 3e4891b50163175b4b34d762704c240a 126 Pfam PF11777 Protein of unknown function (DUF3316) 6 119 3.4E-18 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VV2_0990 3e4891b50163175b4b34d762704c240a 126 PIRSF PIRSF028299 4 126 1.7E-50 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VV1_1426 28b21741730034f1256c5e27f5ce24cc 587 Pfam PF04932 O-Antigen ligase 221 366 5.5E-15 T 14-10-2018 IPR007016 O-antigen ligase-related VV1_1426 28b21741730034f1256c5e27f5ce24cc 587 Pfam PF15864 Protein glycosylation ligase 174 199 2.5E-11 T 14-10-2018 IPR031726 Protein glycosylation ligase domain VV1_1426 28b21741730034f1256c5e27f5ce24cc 587 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 576 1.2E-63 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VV1_0735 2c0e7dac255f2aacd460d6fb3c02319c 127 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0735 2c0e7dac255f2aacd460d6fb3c02319c 127 Gene3D G3DSA:3.90.1030.10 1 117 4.2E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0735 2c0e7dac255f2aacd460d6fb3c02319c 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0735 2c0e7dac255f2aacd460d6fb3c02319c 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0735 2c0e7dac255f2aacd460d6fb3c02319c 127 SUPERFAMILY SSF64263 1 119 5.49E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0735 2c0e7dac255f2aacd460d6fb3c02319c 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.7E-49 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:1.10.8.10 1 55 9.3E-26 T 14-10-2018 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:3.30.479.20 56 139 2.7E-26 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF54713 55 137 2.83E-18 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 76.094 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 Pfam PF00889 Elongation factor TS 70 260 4.7E-62 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF46934 3 53 2.21E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 2.7E-104 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 SUPERFAMILY SSF54713 141 277 3.92E-46 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1860 b37f3a1ff566f9db263a05ad0736041a 280 Gene3D G3DSA:1.10.286.20 184 223 3.5E-23 T 14-10-2018 VV1_1231 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1231 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV1_1231 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV1_1231 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV1_1231 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV1_1231 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV1_1231 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VV1_1231 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1231 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1231 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_1231 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 14-10-2018 VV2_0817 6baba60b63ed9274ff4bdfc3b3edb563 229 SUPERFAMILY SSF161098 10 202 3.01E-41 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0817 6baba60b63ed9274ff4bdfc3b3edb563 229 Gene3D G3DSA:1.10.3720.10 2 219 2.1E-50 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0817 6baba60b63ed9274ff4bdfc3b3edb563 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 6.5E-17 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV2_0817 6baba60b63ed9274ff4bdfc3b3edb563 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 2.8E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2919 101085b8f240423f2056b4094789cad2 431 Pfam PF00815 Histidinol dehydrogenase 26 424 1.5E-170 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 Gene3D G3DSA:3.40.50.1980 30 229 2.8E-125 T 14-10-2018 VV1_2919 101085b8f240423f2056b4094789cad2 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PIRSF PIRSF000099 1 427 6.7E-169 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 Gene3D G3DSA:3.40.50.1980 231 346 2.8E-125 T 14-10-2018 VV1_2919 101085b8f240423f2056b4094789cad2 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.327 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.0E-101 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2919 101085b8f240423f2056b4094789cad2 431 SUPERFAMILY SSF53720 3 424 5.89E-92 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV1_2919 101085b8f240423f2056b4094789cad2 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 5.6E-166 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VV1_2069 431312cce890d4d87f83b823b31e4252 129 Gene3D G3DSA:2.60.40.3230 18 128 6.8E-27 T 14-10-2018 IPR038483 YcfL-like superfamily VV1_2069 431312cce890d4d87f83b823b31e4252 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 4.6E-28 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 VV2_0381 bb6800fec9c2430f4ce45454c0df845c 278 SUPERFAMILY SSF52768 44 247 1.28E-20 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VV2_0381 bb6800fec9c2430f4ce45454c0df845c 278 Gene3D G3DSA:3.40.800.10 38 214 7.0E-10 T 14-10-2018 VV2_0381 bb6800fec9c2430f4ce45454c0df845c 278 Pfam PF00491 Arginase family 56 210 2.8E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV1_2548 5d69248f58d3175236501ac64efcb33c 322 Pfam PF00665 Integrase core domain 172 279 3.6E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_2548 5d69248f58d3175236501ac64efcb33c 322 Gene3D G3DSA:1.10.10.60 2 45 1.0E-6 T 14-10-2018 VV1_2548 5d69248f58d3175236501ac64efcb33c 322 Gene3D G3DSA:3.30.420.10 167 321 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2548 5d69248f58d3175236501ac64efcb33c 322 Pfam PF13936 Helix-turn-helix domain 2 45 2.3E-16 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VV1_2548 5d69248f58d3175236501ac64efcb33c 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 14-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VV1_2548 5d69248f58d3175236501ac64efcb33c 322 SUPERFAMILY SSF53098 175 319 1.77E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_1167 afccbd9a86d420e45fe61f2a58fb8e54 168 Gene3D G3DSA:2.30.30.40 27 153 5.2E-31 T 14-10-2018 VV2_1167 afccbd9a86d420e45fe61f2a58fb8e54 168 SUPERFAMILY SSF50341 18 161 1.44E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV2_1167 afccbd9a86d420e45fe61f2a58fb8e54 168 Pfam PF01584 CheW-like domain 24 160 1.3E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_1167 afccbd9a86d420e45fe61f2a58fb8e54 168 SMART SM00260 20 159 6.3E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_1167 afccbd9a86d420e45fe61f2a58fb8e54 168 Gene3D G3DSA:2.40.50.180 43 154 5.2E-31 T 14-10-2018 VV2_1620 da89c5cce24f237065c7a6e75b06c6f3 92 SUPERFAMILY SSF54534 6 90 3.79E-24 T 14-10-2018 VV2_1620 da89c5cce24f237065c7a6e75b06c6f3 92 Gene3D G3DSA:3.10.50.40 2 92 1.5E-31 T 14-10-2018 VV2_1620 da89c5cce24f237065c7a6e75b06c6f3 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 4.2E-19 T 14-10-2018 VV2_1289 a036437a613397446da874b57aee8622 340 SUPERFAMILY SSF47413 11 60 4.98E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1289 a036437a613397446da874b57aee8622 340 SMART SM00354 10 80 1.4E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1289 a036437a613397446da874b57aee8622 340 Gene3D G3DSA:3.40.50.2300 70 314 1.9E-77 T 14-10-2018 VV2_1289 a036437a613397446da874b57aee8622 340 SUPERFAMILY SSF53822 70 336 1.4E-78 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_1289 a036437a613397446da874b57aee8622 340 Gene3D G3DSA:3.40.50.2300 168 297 1.9E-77 T 14-10-2018 VV2_1289 a036437a613397446da874b57aee8622 340 Pfam PF13377 Periplasmic binding protein-like domain 178 335 8.4E-38 T 14-10-2018 VV2_1289 a036437a613397446da874b57aee8622 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 9.2E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1289 a036437a613397446da874b57aee8622 340 Gene3D G3DSA:1.10.260.40 1 66 3.8E-17 T 14-10-2018 VV2_1289 a036437a613397446da874b57aee8622 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 14-10-2018 VV1_1730 fabb822f626126b1243cb93b95043eab 326 Gene3D G3DSA:3.30.70.2020 8 322 2.1E-167 T 14-10-2018 VV1_1730 fabb822f626126b1243cb93b95043eab 326 Gene3D G3DSA:1.10.150.210 115 177 2.1E-167 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VV1_1730 fabb822f626126b1243cb93b95043eab 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 8.9E-83 T 14-10-2018 VV1_1730 fabb822f626126b1243cb93b95043eab 326 SUPERFAMILY SSF56784 104 311 6.64E-48 T 14-10-2018 IPR036412 HAD-like superfamily VV1_1730 fabb822f626126b1243cb93b95043eab 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 1.9E-11 T 14-10-2018 VV1_1730 fabb822f626126b1243cb93b95043eab 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 4.8E-24 T 14-10-2018 VV1_1730 fabb822f626126b1243cb93b95043eab 326 Gene3D G3DSA:3.40.50.1000 3 310 2.1E-167 T 14-10-2018 IPR023214 HAD superfamily VV1_1551 99ae798ac257bbcb701aa93203b33d5e 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 179 3.0E-36 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VV1_1551 99ae798ac257bbcb701aa93203b33d5e 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 35.791 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VV1_1551 99ae798ac257bbcb701aa93203b33d5e 191 SUPERFAMILY SSF101327 6 178 4.05E-47 T 14-10-2018 IPR036255 YgfB-like superfamily VV1_1551 99ae798ac257bbcb701aa93203b33d5e 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 23 169 1.0E-10 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VV1_1551 99ae798ac257bbcb701aa93203b33d5e 191 Gene3D G3DSA:1.20.120.740 3 191 3.7E-49 T 14-10-2018 VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 TIGRFAM TIGR00277 HDIG: HDIG domain 248 338 3.0E-7 T 14-10-2018 IPR006675 HDIG domain VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 SUPERFAMILY SSF109604 238 409 1.59E-32 T 14-10-2018 VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 SMART SM00471 244 379 1.5E-10 T 14-10-2018 IPR003607 HD/PDEase domain VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 SMART SM00471 30 159 21.0 T 14-10-2018 IPR003607 HD/PDEase domain VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 Pfam PF01966 HD domain 248 369 6.6E-18 T 14-10-2018 IPR006674 HD domain VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 Gene3D G3DSA:1.10.3210.10 19 197 1.0E-18 T 14-10-2018 VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 SUPERFAMILY SSF109604 25 193 4.19E-14 T 14-10-2018 VV1_2288 24ac26bf5ec271eb0554eeb2b7b35eb2 422 Gene3D G3DSA:1.10.3210.10 230 420 3.0E-50 T 14-10-2018 VV1_1100 3379568ac53a886cbf48d6796594d93e 173 Pfam PF01202 Shikimate kinase 13 129 8.8E-13 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VV1_1100 3379568ac53a886cbf48d6796594d93e 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 165 6.9E-64 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VV1_1100 3379568ac53a886cbf48d6796594d93e 173 SUPERFAMILY SSF52540 4 166 2.93E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1100 3379568ac53a886cbf48d6796594d93e 173 Gene3D G3DSA:3.40.50.300 2 167 7.0E-65 T 14-10-2018 VV1_2863 c2e06d3093297c046c49632133544025 509 SUPERFAMILY SSF46689 459 507 8.06E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2863 c2e06d3093297c046c49632133544025 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VV1_2863 c2e06d3093297c046c49632133544025 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 1.1E-4 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_2863 c2e06d3093297c046c49632133544025 509 Gene3D G3DSA:1.10.10.60 455 509 2.8E-8 T 14-10-2018 VV1_2863 c2e06d3093297c046c49632133544025 509 SUPERFAMILY SSF52540 193 430 1.13E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2863 c2e06d3093297c046c49632133544025 509 Gene3D G3DSA:3.40.50.300 180 364 2.7E-64 T 14-10-2018 VV1_2863 c2e06d3093297c046c49632133544025 509 SUPERFAMILY SSF55781 7 166 3.71E-17 T 14-10-2018 VV1_2863 c2e06d3093297c046c49632133544025 509 Pfam PF00158 Sigma-54 interaction domain 195 361 8.9E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_2863 c2e06d3093297c046c49632133544025 509 Gene3D G3DSA:1.10.8.60 365 444 8.5E-16 T 14-10-2018 VV1_2863 c2e06d3093297c046c49632133544025 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV1_2863 c2e06d3093297c046c49632133544025 509 SMART SM00065 21 170 2.0E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV1_2863 c2e06d3093297c046c49632133544025 509 Gene3D G3DSA:3.30.450.40 4 174 9.6E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_2863 c2e06d3093297c046c49632133544025 509 SMART SM00382 214 358 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2644 8519aeb6bc404fe618e121eb46b1f001 207 Pfam PF04352 ProQ/FINO family 6 113 7.2E-43 T 14-10-2018 IPR016103 ProQ/FinO domain VV1_2644 8519aeb6bc404fe618e121eb46b1f001 207 Pfam PF17516 ProQ C-terminal domain 158 206 2.6E-22 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VV1_2644 8519aeb6bc404fe618e121eb46b1f001 207 Gene3D G3DSA:1.10.1710.10 1 121 6.3E-24 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VV1_2644 8519aeb6bc404fe618e121eb46b1f001 207 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 207 30.33 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VV1_2644 8519aeb6bc404fe618e121eb46b1f001 207 SMART SM00945 3 117 3.2E-63 T 14-10-2018 IPR016103 ProQ/FinO domain VV1_2644 8519aeb6bc404fe618e121eb46b1f001 207 SUPERFAMILY SSF48657 4 117 2.22E-39 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily VV1_1138 9bd637fba0feb239f0f5083e3c56a361 207 Pfam PF01810 LysE type translocator 17 204 2.1E-36 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_1138 9bd637fba0feb239f0f5083e3c56a361 207 PIRSF PIRSF006324 2 207 3.6E-57 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV2_0001 423ca5202b308da006632220f6a1709d 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 253 4.3E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_0001 423ca5202b308da006632220f6a1709d 266 Gene3D G3DSA:1.10.3720.10 74 260 2.3E-34 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0001 423ca5202b308da006632220f6a1709d 266 SUPERFAMILY SSF161098 74 258 3.92E-39 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0001 423ca5202b308da006632220f6a1709d 266 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 2 258 5.2E-120 T 14-10-2018 IPR017784 ABC transporter, choline, permease protein VV1_2496 5484e56f81d5b1668dcf8cb75a0259bc 77 Pfam PF13302 Acetyltransferase (GNAT) domain 1 53 1.0E-10 T 14-10-2018 IPR000182 GNAT domain VV1_2496 5484e56f81d5b1668dcf8cb75a0259bc 77 Gene3D G3DSA:3.40.630.30 1 77 3.4E-16 T 14-10-2018 VV1_2496 5484e56f81d5b1668dcf8cb75a0259bc 77 SUPERFAMILY SSF55729 2 75 2.38E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0407 2d6dedec80fe42738b1fe90f94662be2 352 SUPERFAMILY SSF51695 22 348 3.4E-90 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VV2_0407 2d6dedec80fe42738b1fe90f94662be2 352 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 27 343 2.9E-64 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VV2_0407 2d6dedec80fe42738b1fe90f94662be2 352 Gene3D G3DSA:3.20.20.190 20 349 8.9E-123 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 SUPERFAMILY SSF58104 337 646 2.09E-70 T 14-10-2018 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 540 3.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 509 3.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 195 210 3.6E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 SMART SM00283 384 645 7.9E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 SMART SM01358 35 288 1.6E-42 T 14-10-2018 IPR032255 Helical bimodular sensor domain VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 612 4.6E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 SMART SM00304 317 369 4.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1253 e4a30bbf1b2d4f069046830a73935fe8 647 Gene3D G3DSA:1.10.287.950 316 647 4.2E-69 T 14-10-2018 VV2_0090 3d95a78aeab1959fd2859280c692aad0 305 Pfam PF00482 Type II secretion system (T2SS), protein F 137 261 3.8E-18 T 14-10-2018 IPR018076 Type II secretion system F domain VV2_0090 3d95a78aeab1959fd2859280c692aad0 305 Gene3D G3DSA:1.20.81.30 125 240 2.8E-5 T 14-10-2018 VV1_1266 d6872ba127935bb89a12317791ed857a 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.285 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VV1_1266 d6872ba127935bb89a12317791ed857a 125 Gene3D G3DSA:1.20.1300.10 6 125 2.7E-43 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1266 d6872ba127935bb89a12317791ed857a 125 SUPERFAMILY SSF81343 7 125 1.19E-49 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1266 d6872ba127935bb89a12317791ed857a 125 Pfam PF02313 Fumarate reductase subunit D 11 123 3.5E-43 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VV1_1266 d6872ba127935bb89a12317791ed857a 125 PIRSF PIRSF000179 6 125 7.3E-55 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VV1_1266 d6872ba127935bb89a12317791ed857a 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 2.0E-60 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VV1_1296 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 141 162 6.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_1296 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 94 116 6.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_1296 8df298d839681030beb360542fb55ec1 399 PRINTS PR00721 Stomatin signature 197 220 6.1E-7 T 14-10-2018 IPR001972 Stomatin family GO:0016020 VV1_1296 8df298d839681030beb360542fb55ec1 399 TIGRFAM TIGR01933 hflK: HflK protein 89 349 1.9E-124 T 14-10-2018 IPR010201 HflK GO:0016021 VV1_1296 8df298d839681030beb360542fb55ec1 399 Pfam PF01145 SPFH domain / Band 7 family 91 262 2.0E-31 T 14-10-2018 IPR001107 Band 7 domain VV1_1296 8df298d839681030beb360542fb55ec1 399 Pfam PF12221 Bacterial membrane protein N terminal 1 58 7.4E-14 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal VV1_1296 8df298d839681030beb360542fb55ec1 399 SMART SM00244 87 247 1.9E-52 T 14-10-2018 IPR001107 Band 7 domain VV1_1296 8df298d839681030beb360542fb55ec1 399 SUPERFAMILY SSF117892 120 252 8.5E-23 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VV1_1296 8df298d839681030beb360542fb55ec1 399 Gene3D G3DSA:3.30.479.30 117 249 4.6E-22 T 14-10-2018 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 83 177 2.5E-38 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-73 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.168 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Gene3D G3DSA:3.90.930.12 1 82 4.5E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PIRSF PIRSF002162 1 177 1.1E-42 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 1 82 4.68E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 91 164 2.0E-17 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 Pfam PF00347 Ribosomal protein L6 11 82 8.1E-21 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0745 4a0d61b8b8d7e489cd4f1d0743d78d99 177 SUPERFAMILY SSF56053 83 177 2.88E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 SUPERFAMILY SSF46785 17 109 1.9E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.5E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 SMART SM00895 92 219 8.8E-21 T 14-10-2018 IPR011711 GntR, C-terminal VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 Gene3D G3DSA:1.10.10.10 4 83 4.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 Gene3D G3DSA:1.20.120.530 85 227 3.1E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 Pfam PF07729 FCD domain 92 217 1.6E-24 T 14-10-2018 IPR011711 GntR, C-terminal VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 SUPERFAMILY SSF48008 88 225 2.2E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_2733 b8e9fb703582ed1cd8171ada0fb80013 231 SMART SM00345 24 82 2.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 Gene3D G3DSA:1.20.120.530 159 300 2.1E-11 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 73 1.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 SMART SM00895 165 289 2.6E-9 T 14-10-2018 IPR011711 GntR, C-terminal VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 Gene3D G3DSA:1.10.10.10 107 154 1.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 SUPERFAMILY SSF46785 11 73 1.4E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 Pfam PF07729 FCD domain 183 288 3.8E-7 T 14-10-2018 IPR011711 GntR, C-terminal VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 SUPERFAMILY SSF48008 164 295 1.05E-11 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV2_1014 7747dc6aed44e26e83bd3a7fcff4eb6f 321 Gene3D G3DSA:1.10.10.10 1 74 3.5E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 Gene3D G3DSA:3.40.50.970 376 564 7.2E-46 T 14-10-2018 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 Gene3D G3DSA:3.40.50.1220 216 342 5.9E-41 T 14-10-2018 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 Gene3D G3DSA:3.40.50.970 4 199 8.8E-58 T 14-10-2018 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 560 32.601 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 Pfam PF16582 Middle domain of thiamine pyrophosphate 190 394 2.5E-43 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 SUPERFAMILY SSF52467 218 347 1.49E-7 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 142 1.8E-27 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 531 2.4E-5 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 PIRSF PIRSF004983 3 564 3.1E-192 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 436 1.0E-136 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 SUPERFAMILY SSF52518 381 553 5.89E-24 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_3172 a4c1d3381beae0a3cf17cb221f2c4be1 564 SUPERFAMILY SSF52518 9 179 1.61E-30 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_1902 80b2bcfaee7d2cd667e358907798eb41 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 3.0E-111 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VV1_1902 80b2bcfaee7d2cd667e358907798eb41 417 Pfam PF00860 Permease family 3 371 3.0E-91 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VV1_1902 80b2bcfaee7d2cd667e358907798eb41 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VV2_0282 01b56923edc33ef40ab7a1ace7cbb668 103 SUPERFAMILY SSF55159 3 99 4.84E-27 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VV2_0282 01b56923edc33ef40ab7a1ace7cbb668 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.1E-38 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VV2_0282 01b56923edc33ef40ab7a1ace7cbb668 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.9E-19 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VV2_0282 01b56923edc33ef40ab7a1ace7cbb668 103 Gene3D G3DSA:3.30.780.10 23 103 8.5E-34 T 14-10-2018 VV2_0282 01b56923edc33ef40ab7a1ace7cbb668 103 PIRSF PIRSF037511 1 103 5.2E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VV1_1255 7035a959eab4208cf99da1c395a62c8f 171 PIRSF PIRSF034445 1 160 4.0E-20 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VV1_1255 7035a959eab4208cf99da1c395a62c8f 171 Pfam PF07813 LTXXQ motif family protein 40 150 6.1E-25 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VV1_1255 7035a959eab4208cf99da1c395a62c8f 171 Gene3D G3DSA:1.20.120.1490 37 155 2.7E-27 T 14-10-2018 VV2_0879 0faa2d93c7c62c617970401d7865a5b9 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 2.9E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VV2_0879 0faa2d93c7c62c617970401d7865a5b9 346 Gene3D G3DSA:3.30.360.10 128 329 1.1E-117 T 14-10-2018 VV2_0879 0faa2d93c7c62c617970401d7865a5b9 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 203 1.1E-12 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VV2_0879 0faa2d93c7c62c617970401d7865a5b9 346 Gene3D G3DSA:3.40.50.720 6 315 1.1E-117 T 14-10-2018 VV2_0879 0faa2d93c7c62c617970401d7865a5b9 346 SUPERFAMILY SSF51735 4 203 1.52E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0065 3720992f27ca7871280af512e41f0b50 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 6.3E-110 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VV2_0065 3720992f27ca7871280af512e41f0b50 306 Gene3D G3DSA:3.40.1190.20 1 301 3.1E-104 T 14-10-2018 IPR029056 Ribokinase-like VV2_0065 3720992f27ca7871280af512e41f0b50 306 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.031 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VV2_0065 3720992f27ca7871280af512e41f0b50 306 PRINTS PR00990 Ribokinase signature 217 228 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VV2_0065 3720992f27ca7871280af512e41f0b50 306 PRINTS PR00990 Ribokinase signature 6 27 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VV2_0065 3720992f27ca7871280af512e41f0b50 306 PRINTS PR00990 Ribokinase signature 33 52 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VV2_0065 3720992f27ca7871280af512e41f0b50 306 PRINTS PR00990 Ribokinase signature 173 188 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VV2_0065 3720992f27ca7871280af512e41f0b50 306 PRINTS PR00990 Ribokinase signature 105 118 2.4E-36 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VV2_0065 3720992f27ca7871280af512e41f0b50 306 SUPERFAMILY SSF53613 1 302 3.27E-84 T 14-10-2018 IPR029056 Ribokinase-like VV2_0065 3720992f27ca7871280af512e41f0b50 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VV2_0065 3720992f27ca7871280af512e41f0b50 306 Pfam PF00294 pfkB family carbohydrate kinase 1 294 7.8E-75 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VV1_1876 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.0E-48 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 7.2E-64 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.1E-163 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 SUPERFAMILY SSF52096 5 318 3.83E-104 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_1876 8d437094930fbca336600d3432fa0ca5 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.427 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1876 8d437094930fbca336600d3432fa0ca5 319 Gene3D G3DSA:3.90.226.10 2 318 1.5E-119 T 14-10-2018 VV2_1533 3368556b407b40f0951a998385733a71 574 SMART SM00382 324 510 8.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1533 3368556b407b40f0951a998385733a71 574 SMART SM00382 29 221 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1533 3368556b407b40f0951a998385733a71 574 Gene3D G3DSA:3.40.50.300 1 251 4.0E-69 T 14-10-2018 VV2_1533 3368556b407b40f0951a998385733a71 574 SUPERFAMILY SSF52540 2 235 9.85E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1533 3368556b407b40f0951a998385733a71 574 SUPERFAMILY SSF52540 297 526 1.7E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1533 3368556b407b40f0951a998385733a71 574 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1533 3368556b407b40f0951a998385733a71 574 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1533 3368556b407b40f0951a998385733a71 574 Pfam PF00005 ABC transporter 315 461 2.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1533 3368556b407b40f0951a998385733a71 574 Pfam PF00005 ABC transporter 20 170 9.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1533 3368556b407b40f0951a998385733a71 574 Gene3D G3DSA:3.40.50.300 296 573 4.1E-66 T 14-10-2018 VV2_1533 3368556b407b40f0951a998385733a71 574 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 2.5E-20 T 14-10-2018 IPR022216 Putative ABC cobalt transporter VV2_1501 14a79197785d73410c29ca0ae46f1c11 242 Pfam PF06629 MltA-interacting protein MipA 33 242 1.1E-34 T 14-10-2018 IPR010583 MltA-interacting MipA VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 Pfam PF14864 Alkyl sulfatase C-terminal 532 655 6.6E-41 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 Pfam PF00753 Metallo-beta-lactamase superfamily 126 349 2.0E-37 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 Gene3D G3DSA:3.60.15.30 25 384 1.3E-166 T 14-10-2018 VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 Gene3D G3DSA:3.30.1050.10 528 655 7.3E-46 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 SUPERFAMILY SSF56281 26 526 3.64E-156 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 SMART SM00849 127 349 5.3E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 SUPERFAMILY SSF55718 534 655 5.65E-37 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 Pfam PF14863 Alkyl sulfatase dimerisation 388 524 1.4E-56 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VV2_0989 e47931725ba2a5930dbe22b32a87f3a2 655 Gene3D G3DSA:1.25.40.880 385 525 6.7E-59 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VV1_1332 779865bbb20783bcab07be1ec311974a 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 8.0E-62 T 14-10-2018 IPR013559 YheO-like VV1_1332 779865bbb20783bcab07be1ec311974a 240 Pfam PF13309 HTH domain 174 231 6.4E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VV1_1332 779865bbb20783bcab07be1ec311974a 240 Pfam PF08348 YheO-like PAS domain 31 139 8.7E-36 T 14-10-2018 IPR013559 YheO-like VV1_1587 1fcd3a58cb9a286c7d9bbc7293ec9a28 298 Pfam PF01476 LysM domain 39 81 9.2E-10 T 14-10-2018 IPR018392 LysM domain VV1_1587 1fcd3a58cb9a286c7d9bbc7293ec9a28 298 Pfam PF01551 Peptidase family M23 199 293 2.1E-31 T 14-10-2018 IPR016047 Peptidase M23 VV1_1587 1fcd3a58cb9a286c7d9bbc7293ec9a28 298 Gene3D G3DSA:2.70.70.10 168 297 5.1E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1587 1fcd3a58cb9a286c7d9bbc7293ec9a28 298 SUPERFAMILY SSF51261 38 297 1.57E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1587 1fcd3a58cb9a286c7d9bbc7293ec9a28 298 Gene3D G3DSA:3.10.350.10 36 81 1.3E-11 T 14-10-2018 IPR036779 LysM domain superfamily VV1_1587 1fcd3a58cb9a286c7d9bbc7293ec9a28 298 SMART SM00257 38 82 2.1E-9 T 14-10-2018 IPR018392 LysM domain VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 524 2.2E-250 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 SUPERFAMILY SSF52029 185 376 4.36E-80 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 SUPERFAMILY SSF48592 7 521 7.41E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.6E-98 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 SUPERFAMILY SSF54849 137 203 1.37E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 PRINTS PR00298 60kDa chaperonin signature 27 53 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 PRINTS PR00298 60kDa chaperonin signature 350 375 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 PRINTS PR00298 60kDa chaperonin signature 83 110 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 PRINTS PR00298 60kDa chaperonin signature 398 419 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 PRINTS PR00298 60kDa chaperonin signature 268 291 2.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 Gene3D G3DSA:3.50.7.10 192 372 1.9E-237 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 Gene3D G3DSA:1.10.560.10 8 521 1.9E-237 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 532 39.826 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 Gene3D G3DSA:3.30.260.10 136 410 1.9E-237 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VV2_1134 0e0e34d515c29d0d9717f04772a86cdf 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 PIRSF PIRSF000137 2 491 6.6E-129 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 32 55 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 204 218 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 SUPERFAMILY SSF51905 8 483 2.46E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 SUPERFAMILY SSF54373 240 423 5.89E-47 T 14-10-2018 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 Pfam PF00732 GMC oxidoreductase 4 245 5.4E-72 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 Gene3D G3DSA:3.30.560.10 4 418 2.6E-159 T 14-10-2018 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 Pfam PF05199 GMC oxidoreductase 338 475 2.4E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VV1_2149 0cf2c529a231b5f5cb10dcf2f9742550 497 Gene3D G3DSA:3.50.50.60 31 480 2.6E-159 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 31 310 1.3E-108 T 14-10-2018 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 Gene3D G3DSA:3.40.190.10 131 315 1.3E-108 T 14-10-2018 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 5.0E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 SUPERFAMILY SSF53850 26 330 5.65E-86 T 14-10-2018 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PIRSF PIRSF019574 1 343 3.8E-109 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2601 c33e1f8def1eefe251da4a3ac5b98d66 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.9E-71 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_0592 b17a143b26e7e4c7339bed4225a13475 197 SMART SM00749 48 111 13.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VV1_0592 b17a143b26e7e4c7339bed4225a13475 197 SMART SM00749 125 188 1.9E-5 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VV1_0592 b17a143b26e7e4c7339bed4225a13475 197 Pfam PF04972 BON domain 120 185 3.8E-19 T 14-10-2018 IPR007055 BON domain VV1_0592 b17a143b26e7e4c7339bed4225a13475 197 Pfam PF04972 BON domain 44 110 1.5E-10 T 14-10-2018 IPR007055 BON domain VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 Pfam PF00072 Response regulator receiver domain 8 117 6.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 1.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 Gene3D G3DSA:3.40.50.12740 6 206 1.3E-52 T 14-10-2018 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 SUPERFAMILY SSF52172 4 129 4.7E-26 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 SUPERFAMILY SSF46894 129 202 5.44E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 SMART SM00421 144 201 6.9E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0511 921ddb5ae3034a1a17a6023642793e87 206 SMART SM00448 6 116 3.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0879 654adec41240ab0bc6e479261b5684f0 128 PIRSF PIRSF016821 5 128 1.5E-43 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VV1_0879 654adec41240ab0bc6e479261b5684f0 128 Pfam PF01479 S4 domain 8 53 1.7E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0879 654adec41240ab0bc6e479261b5684f0 128 Gene3D G3DSA:3.10.290.10 2 107 1.0E-38 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_0879 654adec41240ab0bc6e479261b5684f0 128 SUPERFAMILY SSF55174 8 105 2.22E-32 T 14-10-2018 VV1_0879 654adec41240ab0bc6e479261b5684f0 128 SMART SM00363 8 71 1.4E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 Gene3D G3DSA:2.30.30.60 135 184 2.4E-22 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 Pfam PF05552 Conserved TM helix 21 69 1.0E-12 T 14-10-2018 IPR008910 Conserved TM helix VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 SUPERFAMILY SSF50182 120 185 1.21E-17 T 14-10-2018 IPR010920 LSM domain superfamily VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 Pfam PF00924 Mechanosensitive ion channel 77 274 2.0E-57 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 SUPERFAMILY SSF82861 33 118 6.67E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 SUPERFAMILY SSF82689 187 284 1.7E-34 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VV1_1542 a2cdc27eb2ed546e5b725097b61d5336 287 Gene3D G3DSA:3.30.70.100 185 279 9.0E-30 T 14-10-2018 VV1_2926 7d5d92a294793950f7bd531a5c29e079 374 SUPERFAMILY SSF52402 5 247 1.59E-56 T 14-10-2018 VV1_2926 7d5d92a294793950f7bd531a5c29e079 374 Gene3D G3DSA:2.40.30.10 287 372 2.7E-33 T 14-10-2018 VV1_2926 7d5d92a294793950f7bd531a5c29e079 374 Gene3D G3DSA:3.40.50.620 1 215 5.8E-94 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_2926 7d5d92a294793950f7bd531a5c29e079 374 Pfam PF03054 tRNA methyl transferase 7 365 1.1E-142 T 14-10-2018 VV1_2926 7d5d92a294793950f7bd531a5c29e079 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 1.4E-151 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VV1_2926 7d5d92a294793950f7bd531a5c29e079 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 40.093 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VV1_2926 7d5d92a294793950f7bd531a5c29e079 374 Gene3D G3DSA:2.30.30.280 216 286 1.2E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VV2_1559 7a31b7c1a8fe618e2fbf423d8da72368 249 SMART SM00382 28 220 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1559 7a31b7c1a8fe618e2fbf423d8da72368 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 1.7E-125 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VV2_1559 7a31b7c1a8fe618e2fbf423d8da72368 249 Gene3D G3DSA:3.40.50.300 4 246 5.5E-62 T 14-10-2018 VV2_1559 7a31b7c1a8fe618e2fbf423d8da72368 249 Pfam PF00005 ABC transporter 19 174 3.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1559 7a31b7c1a8fe618e2fbf423d8da72368 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1559 7a31b7c1a8fe618e2fbf423d8da72368 249 SUPERFAMILY SSF52540 4 235 4.58E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1193 6a4cffd56ff4c9d3e4aeef544e7030a4 256 Pfam PF00072 Response regulator receiver domain 8 116 5.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1193 6a4cffd56ff4c9d3e4aeef544e7030a4 256 SMART SM00850 161 256 5.4E-30 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VV2_1193 6a4cffd56ff4c9d3e4aeef544e7030a4 256 Gene3D G3DSA:3.40.50.2300 2 128 1.3E-32 T 14-10-2018 VV2_1193 6a4cffd56ff4c9d3e4aeef544e7030a4 256 SMART SM00448 5 117 3.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1193 6a4cffd56ff4c9d3e4aeef544e7030a4 256 Pfam PF04397 LytTr DNA-binding domain 162 255 2.8E-28 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VV2_1193 6a4cffd56ff4c9d3e4aeef544e7030a4 256 Gene3D G3DSA:2.40.50.40 155 221 2.3E-11 T 14-10-2018 VV2_1193 6a4cffd56ff4c9d3e4aeef544e7030a4 256 SUPERFAMILY SSF52172 2 129 4.13E-33 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0695 44fe211708ab8649f2e917c0364cdddc 97 SUPERFAMILY SSF46689 4 83 1.61E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.2E-34 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.220.10 1 159 7.3E-60 T 14-10-2018 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 Gene3D G3DSA:3.40.630.10 181 497 2.5E-141 T 14-10-2018 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF53187 179 496 8.48E-126 T 14-10-2018 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.835 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 2.6E-124 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VV1_1476 21c2105d5bab47f4688b358489b63c5e 502 SUPERFAMILY SSF52949 1 184 3.47E-52 T 14-10-2018 VV2_0787 95a3817d78773818c4909be1dac92420 300 SUPERFAMILY SSF46689 59 107 9.68E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0787 95a3817d78773818c4909be1dac92420 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 1.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0787 95a3817d78773818c4909be1dac92420 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 1.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0787 95a3817d78773818c4909be1dac92420 300 SMART SM00871 150 299 8.0E-20 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VV2_0787 95a3817d78773818c4909be1dac92420 300 SMART SM00342 23 106 1.4E-33 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0787 95a3817d78773818c4909be1dac92420 300 Gene3D G3DSA:1.10.10.60 57 112 5.7E-15 T 14-10-2018 VV2_0787 95a3817d78773818c4909be1dac92420 300 Pfam PF12833 Helix-turn-helix domain 29 107 4.0E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0787 95a3817d78773818c4909be1dac92420 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_0787 95a3817d78773818c4909be1dac92420 300 Gene3D G3DSA:1.10.10.60 2 56 1.0E-16 T 14-10-2018 VV2_0787 95a3817d78773818c4909be1dac92420 300 SUPERFAMILY SSF55136 153 298 6.17E-29 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_0787 95a3817d78773818c4909be1dac92420 300 Pfam PF06445 GyrI-like small molecule binding domain 152 292 5.1E-28 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VV2_0787 95a3817d78773818c4909be1dac92420 300 SUPERFAMILY SSF46689 6 57 3.23E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0787 95a3817d78773818c4909be1dac92420 300 Gene3D G3DSA:3.20.80.10 151 300 4.9E-34 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_0131 bb38eca50dc9452ce742c117e50d4eab 185 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 9 182 1.8E-57 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VV2_0131 bb38eca50dc9452ce742c117e50d4eab 185 PIRSF PIRSF000013 1 185 1.5E-71 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VV2_0131 bb38eca50dc9452ce742c117e50d4eab 185 Gene3D G3DSA:1.10.3820.10 11 185 2.3E-31 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VV2_0131 bb38eca50dc9452ce742c117e50d4eab 185 SUPERFAMILY SSF48695 8 182 1.52E-30 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV1_1954 3c0e441507c605553ba5910991cca358 246 SUPERFAMILY SSF75708 27 245 1.7E-65 T 14-10-2018 VV1_1954 3c0e441507c605553ba5910991cca358 246 Gene3D G3DSA:1.10.287.500 55 189 6.8E-46 T 14-10-2018 VV1_1954 3c0e441507c605553ba5910991cca358 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 3.7E-75 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VV1_1954 3c0e441507c605553ba5910991cca358 246 PIRSF PIRSF002884 13 246 2.7E-96 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Pfam PF00742 Homoserine dehydrogenase 601 796 1.2E-42 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 PIRSF PIRSF000727 5 803 1.2E-299 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Gene3D G3DSA:3.30.360.10 612 782 2.9E-103 T 14-10-2018 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Pfam PF00696 Amino acid kinase family 5 272 9.3E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Gene3D G3DSA:1.20.120.1320 44 137 1.9E-74 T 14-10-2018 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 SUPERFAMILY SSF51735 448 623 1.22E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Gene3D G3DSA:3.40.50.720 451 799 2.9E-103 T 14-10-2018 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Gene3D G3DSA:3.40.1160.10 8 290 1.9E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 4.5E-15 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Gene3D G3DSA:3.30.70.260 381 443 1.7E-5 T 14-10-2018 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 4.6E-65 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 Gene3D G3DSA:3.30.70.260 366 380 1.7E-5 T 14-10-2018 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 SUPERFAMILY SSF53633 5 291 6.02E-58 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1365 a6609e883decf383cfede8858e97d5ea 803 SUPERFAMILY SSF55347 601 784 5.23E-45 T 14-10-2018 VV1_1365 a6609e883decf383cfede8858e97d5ea 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VV2_0965 548f35c533b9fcfd36550423767ea4fc 97 Gene3D G3DSA:3.30.70.100 1 95 8.0E-25 T 14-10-2018 VV2_0965 548f35c533b9fcfd36550423767ea4fc 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 77 9.9E-17 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VV2_0965 548f35c533b9fcfd36550423767ea4fc 97 SUPERFAMILY SSF54909 1 81 1.79E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_0270 1a8fcd9d05e47587d71d17136d710564 506 Gene3D G3DSA:3.60.110.10 207 481 4.4E-16 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV1_0270 1a8fcd9d05e47587d71d17136d710564 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 24.002 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VV1_0270 1a8fcd9d05e47587d71d17136d710564 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 6.4E-99 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VV1_0270 1a8fcd9d05e47587d71d17136d710564 506 SUPERFAMILY SSF56317 214 486 1.7E-43 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV1_0270 1a8fcd9d05e47587d71d17136d710564 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 1.2E-37 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VV2_0919 4b3f8e9089c95f14f5b49e6248e3a61e 131 SUPERFAMILY SSF55021 69 129 3.43E-20 T 14-10-2018 VV2_0919 4b3f8e9089c95f14f5b49e6248e3a61e 131 Pfam PF13840 ACT domain 72 127 3.5E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain VV2_0919 4b3f8e9089c95f14f5b49e6248e3a61e 131 Pfam PF10000 ACT domain 2 69 3.5E-27 T 14-10-2018 IPR018717 Domain of unknown function DUF2241 VV2_0919 4b3f8e9089c95f14f5b49e6248e3a61e 131 Gene3D G3DSA:3.30.2130.10 1 131 3.2E-49 T 14-10-2018 VV2_0919 4b3f8e9089c95f14f5b49e6248e3a61e 131 SUPERFAMILY SSF55021 2 65 1.01E-19 T 14-10-2018 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 SUPERFAMILY SSF117023 454 585 4.71E-43 T 14-10-2018 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 1.5E-41 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Gene3D G3DSA:3.40.1360.10 247 373 1.3E-41 T 14-10-2018 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Pfam PF13155 Toprim-like 269 356 5.9E-14 T 14-10-2018 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Hamap MF_00974 DNA primase [dnaG]. 4 583 29.61 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 PIRSF PIRSF002811 2 586 1.2E-143 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Pfam PF08278 DNA primase DnaG DnaB-binding 458 581 5.5E-35 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Pfam PF10410 DnaB-helicase binding domain of primase 375 427 1.8E-9 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 TIGRFAM TIGR01391 dnaG: DNA primase 5 422 5.9E-147 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 SUPERFAMILY SSF57783 4 101 1.0E-37 T 14-10-2018 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 SMART SM00766 457 582 1.7E-53 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Gene3D G3DSA:3.90.580.10 1 102 1.4E-39 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Pfam PF01807 CHC2 zinc finger 6 101 5.4E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Gene3D G3DSA:1.10.860.10 445 587 1.1E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 SMART SM00493 265 336 5.6E-19 T 14-10-2018 IPR006171 TOPRIM domain VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 SMART SM00400 36 90 2.1E-36 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Gene3D G3DSA:3.90.980.10 121 246 1.4E-44 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 Gene3D G3DSA:1.20.50.20 374 432 1.4E-22 T 14-10-2018 VV1_0631 2b2c507f03f9f478ede5eb525e4f6d24 587 SUPERFAMILY SSF56731 121 433 3.75E-113 T 14-10-2018 VV2_1268 ed62676c2ea56343b18244dba489ae57 441 Gene3D G3DSA:1.10.3210.10 20 197 1.0E-17 T 14-10-2018 VV2_1268 ed62676c2ea56343b18244dba489ae57 441 SUPERFAMILY SSF109604 25 193 8.64E-14 T 14-10-2018 VV2_1268 ed62676c2ea56343b18244dba489ae57 441 TIGRFAM TIGR00277 HDIG: HDIG domain 248 338 3.8E-10 T 14-10-2018 IPR006675 HDIG domain VV2_1268 ed62676c2ea56343b18244dba489ae57 441 SMART SM00471 244 379 4.8E-12 T 14-10-2018 IPR003607 HD/PDEase domain VV2_1268 ed62676c2ea56343b18244dba489ae57 441 SMART SM00471 30 159 15.0 T 14-10-2018 IPR003607 HD/PDEase domain VV2_1268 ed62676c2ea56343b18244dba489ae57 441 Pfam PF01966 HD domain 248 369 6.8E-20 T 14-10-2018 IPR006674 HD domain VV2_1268 ed62676c2ea56343b18244dba489ae57 441 Pfam PF01966 HD domain 37 148 1.9E-5 T 14-10-2018 IPR006674 HD domain VV2_1268 ed62676c2ea56343b18244dba489ae57 441 SUPERFAMILY SSF109604 241 401 1.64E-30 T 14-10-2018 VV2_1268 ed62676c2ea56343b18244dba489ae57 441 Gene3D G3DSA:1.10.3210.10 218 412 2.2E-49 T 14-10-2018 VV1_0608 d7c19af11fef9533c247349d830f270c 274 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 2.5E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV1_0608 d7c19af11fef9533c247349d830f270c 274 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 205 260 3.0E-27 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VV1_0608 d7c19af11fef9533c247349d830f270c 274 SUPERFAMILY SSF56300 14 272 1.04E-55 T 14-10-2018 VV1_0608 d7c19af11fef9533c247349d830f270c 274 Gene3D G3DSA:3.60.21.10 2 272 1.9E-68 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV1_0608 d7c19af11fef9533c247349d830f270c 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 260 42.978 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VV1_0760 e651f3df8f75fcb377f25aa66924d9f5 100 Pfam PF00276 Ribosomal protein L23 9 95 1.4E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VV1_0760 e651f3df8f75fcb377f25aa66924d9f5 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VV1_0760 e651f3df8f75fcb377f25aa66924d9f5 100 Gene3D G3DSA:3.30.70.330 1 100 4.0E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VV1_0760 e651f3df8f75fcb377f25aa66924d9f5 100 SUPERFAMILY SSF54189 3 92 3.6E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0760 e651f3df8f75fcb377f25aa66924d9f5 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 Pfam PF00664 ABC transporter transmembrane region 41 308 5.0E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 Gene3D G3DSA:3.40.50.300 351 604 9.0E-93 T 14-10-2018 VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 SMART SM00382 386 577 1.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 SUPERFAMILY SSF90123 29 344 1.09E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 SUPERFAMILY SSF52540 351 601 8.04E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 Gene3D G3DSA:1.20.1560.10 11 340 1.7E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1089 3da1c2726568f1c7e106b7c3c25c0947 619 Pfam PF00005 ABC transporter 378 531 7.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0649 cf9fe36f8af2b29d45802bc5a6ad3718 601 Pfam PF00501 AMP-binding enzyme 14 466 1.2E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV1_0649 cf9fe36f8af2b29d45802bc5a6ad3718 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV1_0649 cf9fe36f8af2b29d45802bc5a6ad3718 601 Gene3D G3DSA:3.40.50.12780 2 313 1.0E-53 T 14-10-2018 VV1_0649 cf9fe36f8af2b29d45802bc5a6ad3718 601 Gene3D G3DSA:3.40.50.12780 317 459 2.1E-33 T 14-10-2018 VV1_0649 cf9fe36f8af2b29d45802bc5a6ad3718 601 SUPERFAMILY SSF56801 7 596 5.49E-113 T 14-10-2018 VV1_1475 97deffc5f6561ab61a55d4d9d0d4bf98 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 3.6E-31 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VV1_1475 97deffc5f6561ab61a55d4d9d0d4bf98 149 Gene3D G3DSA:3.40.50.10110 1 146 4.8E-40 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VV1_1475 97deffc5f6561ab61a55d4d9d0d4bf98 149 SUPERFAMILY SSF102400 1 146 3.27E-42 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 Pfam PF04055 Radical SAM superfamily 91 252 1.1E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 1.7E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.524 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 SUPERFAMILY SSF102114 52 314 1.07E-67 T 14-10-2018 VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 3.6E-149 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 Gene3D G3DSA:3.20.20.70 48 293 5.2E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 PIRSF PIRSF005963 1 320 1.5E-129 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VV1_0284 cf4a6cb21c740df4f10c2005afa74005 321 SMART SM00729 84 293 3.2E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV2_1630 cc5c5c9924d38a139426aa52b141d6a5 222 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 5.0E-30 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1389 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV2_0477 451a7b1e4aa750e6cb8a929a2a9d22ef 543 SMART SM00283 280 541 8.3E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0477 451a7b1e4aa750e6cb8a929a2a9d22ef 543 SUPERFAMILY SSF58104 234 542 3.01E-72 T 14-10-2018 VV2_0477 451a7b1e4aa750e6cb8a929a2a9d22ef 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 170 1.3E-18 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VV2_0477 451a7b1e4aa750e6cb8a929a2a9d22ef 543 Gene3D G3DSA:1.10.287.950 211 543 1.8E-74 T 14-10-2018 VV2_0477 451a7b1e4aa750e6cb8a929a2a9d22ef 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 505 2.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0477 451a7b1e4aa750e6cb8a929a2a9d22ef 543 SMART SM00304 211 265 1.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2534 61d37fbd159bd787d3f9f8b524ca4ac7 128 Pfam PF14552 Tautomerase enzyme 36 112 1.9E-25 T 14-10-2018 IPR037479 Tautomerase, MSAD family VV1_2534 61d37fbd159bd787d3f9f8b524ca4ac7 128 Gene3D G3DSA:3.30.429.10 1 128 2.3E-40 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VV1_2534 61d37fbd159bd787d3f9f8b524ca4ac7 128 SUPERFAMILY SSF55331 2 119 6.33E-34 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VV1_1334 2ed35b292dea6255287017adae85cb8e 118 Pfam PF02635 DsrE/DsrF-like family 4 118 8.0E-27 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VV1_1334 2ed35b292dea6255287017adae85cb8e 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.5E-47 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF VV1_1334 2ed35b292dea6255287017adae85cb8e 118 SUPERFAMILY SSF75169 3 118 1.27E-37 T 14-10-2018 IPR027396 DsrEFH-like VV1_1334 2ed35b292dea6255287017adae85cb8e 118 Gene3D G3DSA:3.40.1260.10 2 118 6.2E-40 T 14-10-2018 IPR027396 DsrEFH-like VV1_0174 7653aea4e36a77de0c2c92bf7ef98ec5 165 SUPERFAMILY SSF54637 10 156 4.48E-24 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_0174 7653aea4e36a77de0c2c92bf7ef98ec5 165 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.6E-24 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VV1_0174 7653aea4e36a77de0c2c92bf7ef98ec5 165 Gene3D G3DSA:3.10.129.10 15 157 2.8E-26 T 14-10-2018 VV2_1685 d8784c29780e55d042de5fc3cab9c92c 282 Gene3D G3DSA:1.25.40.10 97 265 3.2E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1685 d8784c29780e55d042de5fc3cab9c92c 282 Pfam PF13181 Tetratricopeptide repeat 220 252 1.3E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1685 d8784c29780e55d042de5fc3cab9c92c 282 SMART SM00028 186 219 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1685 d8784c29780e55d042de5fc3cab9c92c 282 SMART SM00028 220 253 0.0027 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1685 d8784c29780e55d042de5fc3cab9c92c 282 SUPERFAMILY SSF48452 172 255 1.22E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2879 b05843a5135654f783f49f9c0ada3a31 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.7E-95 T 14-10-2018 IPR014319 Phage shock protein, PspA VV1_2879 b05843a5135654f783f49f9c0ada3a31 223 Pfam PF04012 PspA/IM30 family 2 217 6.7E-61 T 14-10-2018 IPR007157 PspA/IM30 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:2.40.50.140 1 65 1.7E-27 T 14-10-2018 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:1.10.8.10 157 204 1.2E-23 T 14-10-2018 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF50249 2 63 9.14E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF01330 RuvA N terminal domain 2 62 1.3E-20 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.0E-15 T 14-10-2018 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF46929 158 203 1.96E-12 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.3E-65 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 Gene3D G3DSA:1.10.150.20 67 143 9.6E-26 T 14-10-2018 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 SMART SM00278 108 127 0.071 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 SMART SM00278 73 92 180.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.8 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 SUPERFAMILY SSF47781 66 137 7.23E-20 T 14-10-2018 IPR010994 RuvA domain 2-like VV1_2159 a56582d243e739fad42fb11cc85c7dae 204 Pfam PF07499 RuvA, C-terminal domain 160 203 5.0E-17 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VV2_0682 d9241a088a6f003cce7a620002a7410b 60 Pfam PF13276 HTH-like domain 3 51 5.2E-9 T 14-10-2018 IPR025948 HTH-like domain VV1_1209 84283dc51308e10e309e2ab27bb383f6 162 Pfam PF00466 Ribosomal protein L10 5 101 2.1E-26 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VV1_1209 84283dc51308e10e309e2ab27bb383f6 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1209 84283dc51308e10e309e2ab27bb383f6 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.316 T 14-10-2018 IPR022973 Ribosomal protein L10 VV1_1209 84283dc51308e10e309e2ab27bb383f6 162 SUPERFAMILY SSF160369 4 159 4.97E-45 T 14-10-2018 VV1_1209 84283dc51308e10e309e2ab27bb383f6 162 Gene3D G3DSA:3.30.70.1730 1 124 2.8E-35 T 14-10-2018 VV1_2705 a4270eccf337cf3e0a7a219910982a8c 365 SUPERFAMILY SSF161098 155 346 1.57E-40 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2705 a4270eccf337cf3e0a7a219910982a8c 365 Gene3D G3DSA:1.10.3720.10 147 363 1.2E-48 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2705 a4270eccf337cf3e0a7a219910982a8c 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 6.8E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2705 a4270eccf337cf3e0a7a219910982a8c 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 5.6E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 40 219 1.8E-32 T 14-10-2018 VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 58 69 3.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 149 3.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 166 3.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 206 3.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 Gene3D G3DSA:3.40.50.720 1 223 9.0E-60 T 14-10-2018 VV2_1075 cdd44cb33941d05e8196ef610e8c5b40 223 SUPERFAMILY SSF51735 8 221 5.88E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0267 385668726aa0a8faab4d802ab4e8e06a 225 SMART SM00382 34 220 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0267 385668726aa0a8faab4d802ab4e8e06a 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0267 385668726aa0a8faab4d802ab4e8e06a 225 Gene3D G3DSA:3.40.50.300 3 225 3.2E-69 T 14-10-2018 VV2_0267 385668726aa0a8faab4d802ab4e8e06a 225 Pfam PF00005 ABC transporter 25 171 4.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0267 385668726aa0a8faab4d802ab4e8e06a 225 SUPERFAMILY SSF52540 5 224 3.1E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0260 bbfd997e12846d2cf8c969ffc7936562 279 SUPERFAMILY SSF51197 7 276 5.77E-62 T 14-10-2018 VV2_0260 bbfd997e12846d2cf8c969ffc7936562 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.1E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VV2_0260 bbfd997e12846d2cf8c969ffc7936562 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 6.5E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain VV2_0260 bbfd997e12846d2cf8c969ffc7936562 279 Gene3D G3DSA:2.60.120.330 1 279 8.8E-97 T 14-10-2018 IPR027443 Isopenicillin N synthase-like VV1_0196 de28df40e8b57c368b98272614afa55f 118 Gene3D G3DSA:3.30.70.120 3 112 3.0E-14 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV1_0196 de28df40e8b57c368b98272614afa55f 118 SMART SM00938 8 106 1.0E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_0196 de28df40e8b57c368b98272614afa55f 118 SUPERFAMILY SSF54913 2 104 3.34E-22 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 Gene3D G3DSA:3.40.190.10 174 272 2.8E-22 T 14-10-2018 VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 SUPERFAMILY SSF53850 93 301 1.79E-16 T 14-10-2018 VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 SUPERFAMILY SSF46785 7 87 2.57E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 Gene3D G3DSA:1.10.10.10 2 89 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 Gene3D G3DSA:3.40.190.10 93 297 2.8E-22 T 14-10-2018 VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 4.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1273 f4f776e877c3673ea9a5018fbc57429f 313 Pfam PF03466 LysR substrate binding domain 98 303 1.4E-9 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 1.2E-162 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 PIRSF PIRSF000076 1 553 1.1E-240 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 7.1E-225 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 Gene3D G3DSA:3.40.50.2030 237 382 2.9E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.134 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 Gene3D G3DSA:3.40.50.2030 383 551 3.3E-60 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 Gene3D G3DSA:1.20.1270.20 153 235 3.9E-28 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 Gene3D G3DSA:1.20.1270.20 1 143 1.8E-37 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VV1_2864 6d9ec23439cccbe7de29c73ae0facea3 553 SUPERFAMILY SSF56821 1 551 3.66E-193 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.697 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 SUPERFAMILY SSF53901 1 259 3.93E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 PIRSF PIRSF000429 1 387 8.1E-134 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 2.6E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.8E-143 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 Gene3D G3DSA:3.40.47.10 134 381 5.2E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 Gene3D G3DSA:3.40.47.10 4 267 5.2E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 9.7E-50 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 SUPERFAMILY SSF53901 263 386 1.12E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0982 2f22d8b7b12e0f317bbf2baf8941365d 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 2.2E-245 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VV1_0799 0a9008fdc970e1fe9df86706b12876be 419 SUPERFAMILY SSF53756 60 404 8.24E-21 T 14-10-2018 VV1_0799 0a9008fdc970e1fe9df86706b12876be 419 Gene3D G3DSA:3.40.50.2000 217 407 1.5E-64 T 14-10-2018 VV1_0799 0a9008fdc970e1fe9df86706b12876be 419 Pfam PF00534 Glycosyl transferases group 1 247 402 2.0E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_0799 0a9008fdc970e1fe9df86706b12876be 419 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 8.5E-60 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VV1_0799 0a9008fdc970e1fe9df86706b12876be 419 Gene3D G3DSA:3.40.50.11720 33 210 2.0E-46 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VV2_0609 1a11db14ae3db796ed99dae04264e194 135 Pfam PF12614 Ribosome recycling factor 9 133 4.2E-56 T 14-10-2018 IPR022253 Ribosome recycling factor. bacterial VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 Gene3D G3DSA:3.50.50.60 7 388 2.1E-175 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 SUPERFAMILY SSF54373 212 310 2.59E-32 T 14-10-2018 VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.5E-7 T 14-10-2018 VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 Gene3D G3DSA:3.30.9.90 79 456 2.1E-175 T 14-10-2018 VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 Gene3D G3DSA:3.30.70.20 457 550 3.1E-33 T 14-10-2018 VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 SUPERFAMILY SSF54862 456 555 5.1E-26 T 14-10-2018 VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 SUPERFAMILY SSF51905 3 454 2.69E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 452 553 4.4E-46 T 14-10-2018 VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.5E-6 T 14-10-2018 VV2_0476 0b18362f5a95418c4baaa66e1a743eaa 555 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 4.5E-6 T 14-10-2018 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 SUPERFAMILY SSF56784 3 157 2.0E-39 T 14-10-2018 IPR036412 HAD-like superfamily VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.6E-48 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.608 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 SUPERFAMILY SSF54211 169 253 4.3E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 Gene3D G3DSA:3.40.50.1000 1 165 9.0E-47 T 14-10-2018 IPR023214 HAD superfamily VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 Gene3D G3DSA:3.30.230.40 166 256 2.5E-35 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.8E-66 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 Gene3D G3DSA:3.30.230.40 257 357 7.4E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 6.0E-6 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 4.4E-28 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.114 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VV1_2917 054932b80a69caa326d2a8b9db7367b9 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 1.5E-79 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 VV1_1303 0d6c553887b684f13ae9a66a8911a25a 498 SUPERFAMILY SSF51556 115 413 3.2E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_1303 0d6c553887b684f13ae9a66a8911a25a 498 SUPERFAMILY SSF51338 58 484 4.83E-34 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_1303 0d6c553887b684f13ae9a66a8911a25a 498 Gene3D G3DSA:2.30.40.10 66 479 1.3E-144 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_1303 0d6c553887b684f13ae9a66a8911a25a 498 Gene3D G3DSA:3.20.20.140 116 405 1.3E-144 T 14-10-2018 VV1_1303 0d6c553887b684f13ae9a66a8911a25a 498 Pfam PF01979 Amidohydrolase family 112 460 1.1E-67 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VV2_0385 1539651acebe5469cddb14a5e1a7fb22 328 Gene3D G3DSA:3.40.50.300 2 198 1.1E-44 T 14-10-2018 VV2_0385 1539651acebe5469cddb14a5e1a7fb22 328 SMART SM00833 241 324 0.0095 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VV2_0385 1539651acebe5469cddb14a5e1a7fb22 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 2.0E-42 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VV2_0385 1539651acebe5469cddb14a5e1a7fb22 328 SUPERFAMILY SSF52540 4 171 5.89E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0432 a1807a244a4e17e831e879182f4f78e9 608 PIRSF PIRSF028304 1 607 3.0E-148 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VV2_0432 a1807a244a4e17e831e879182f4f78e9 608 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 608 4.2E-198 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VV2_0432 a1807a244a4e17e831e879182f4f78e9 608 Pfam PF05947 Type VI secretion system, TssF 6 607 3.3E-178 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like VV1_0978 26eb9ffd554dd2e4217389c7b209e9b7 176 Gene3D G3DSA:3.40.50.360 6 174 2.8E-11 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_0978 26eb9ffd554dd2e4217389c7b209e9b7 176 Pfam PF12724 Flavodoxin domain 6 154 3.0E-49 T 14-10-2018 IPR026816 Flavodoxin domain VV1_0978 26eb9ffd554dd2e4217389c7b209e9b7 176 SUPERFAMILY SSF52218 4 159 2.8E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 7.5E-71 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.40.50.670 706 804 4.5E-27 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 SMART SM00433 35 798 2.9E-273 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF00204 DNA gyrase B 221 391 2.8E-61 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.30.565.10 1 220 2.2E-94 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 14-10-2018 IPR006171 TOPRIM domain VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 SUPERFAMILY SSF56719 395 796 7.32E-88 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.10.20.690 593 684 5.5E-35 T 14-10-2018 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.816 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 SUPERFAMILY SSF55874 4 213 3.8E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 SUPERFAMILY SSF54211 221 393 4.93E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.30.230.10 221 393 1.1E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 7.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Gene3D G3DSA:3.40.50.670 399 571 3.6E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 8.1E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 SMART SM00387 31 175 1.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0996 52a5e980a6da878d239f4e1fb54a3124 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 4.6E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VV1_2178 d625479656f801b162bb784a581a5061 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 2.6E-31 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VV1_2178 d625479656f801b162bb784a581a5061 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 2.5E-42 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 VV1_2178 d625479656f801b162bb784a581a5061 189 SUPERFAMILY SSF101327 3 175 1.24E-30 T 14-10-2018 IPR036255 YgfB-like superfamily VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:1.10.8.60 490 583 3.4E-32 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.6E-99 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.2E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 3.2E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF52540 312 586 1.27E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:3.30.230.10 584 771 5.2E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 SMART SM00464 10 201 4.9E-76 T 14-10-2018 IPR003111 Lon, substrate-binding domain VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 SMART SM00382 347 491 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 6.0E-56 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 6.0E-56 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 6.0E-56 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 6.0E-56 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 6.0E-56 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.185 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF88697 10 200 2.49E-48 T 14-10-2018 IPR015947 PUA-like superfamily VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 SUPERFAMILY SSF54211 594 769 1.82E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:2.30.130.40 1 116 1.5E-35 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:3.40.50.300 312 489 9.7E-61 T 14-10-2018 VV1_0021 d6f79399b224b6a710a0261a4a1ce652 783 Gene3D G3DSA:1.20.58.1480 119 244 4.9E-45 T 14-10-2018 VV1_0463 ced177e2e1e642fd393ff8dc542a99fa 730 Gene3D G3DSA:1.10.3720.10 495 727 4.5E-21 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0463 ced177e2e1e642fd393ff8dc542a99fa 730 SUPERFAMILY SSF161098 408 516 2.78E-7 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0463 ced177e2e1e642fd393ff8dc542a99fa 730 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 536 724 1.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0463 ced177e2e1e642fd393ff8dc542a99fa 730 SUPERFAMILY SSF69322 68 371 5.23E-9 T 14-10-2018 VV1_0463 ced177e2e1e642fd393ff8dc542a99fa 730 SUPERFAMILY SSF161098 503 716 6.02E-18 T 14-10-2018 IPR035906 MetI-like superfamily VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 Gene3D G3DSA:3.20.20.70 27 277 4.8E-177 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 69 87 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 Pfam PF00218 Indole-3-glycerol phosphate synthase 24 273 1.7E-96 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 Gene3D G3DSA:3.20.20.70 278 470 4.8E-177 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 SUPERFAMILY SSF51366 20 273 1.29E-79 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 SUPERFAMILY SSF51366 279 474 6.28E-56 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 279 470 3.9E-54 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 22 276 34.88 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VV1_3067 feec7b5c867270656b2afe2bbe4eedbc 476 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 277 476 30.137 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VV1_2362 e59aa976c5809346b5ebe18d3c3cf4ab 269 SUPERFAMILY SSF47413 5 68 9.96E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_2362 e59aa976c5809346b5ebe18d3c3cf4ab 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 7.4E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_2362 e59aa976c5809346b5ebe18d3c3cf4ab 269 SMART SM00530 12 66 0.003 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_2362 e59aa976c5809346b5ebe18d3c3cf4ab 269 Gene3D G3DSA:1.10.260.40 3 73 7.1E-6 T 14-10-2018 VV1_0757 4a8e027edf593979c60b380a74d4b34d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.2E-39 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VV1_0757 4a8e027edf593979c60b380a74d4b34d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0757 4a8e027edf593979c60b380a74d4b34d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.0E-50 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0757 4a8e027edf593979c60b380a74d4b34d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0757 4a8e027edf593979c60b380a74d4b34d 110 Gene3D G3DSA:3.90.470.10 1 110 2.1E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0757 4a8e027edf593979c60b380a74d4b34d 110 SUPERFAMILY SSF54843 1 109 7.85E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VV2_0654 26a909a3898b3c838cabda89327d4ebc 61 Pfam PF00665 Integrase core domain 2 51 2.5E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV2_0654 26a909a3898b3c838cabda89327d4ebc 61 SUPERFAMILY SSF53098 1 57 4.4E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_0005 c5c460842671227a7dca9d479154747f 114 Pfam PF13384 Homeodomain-like domain 26 71 7.7E-6 T 14-10-2018 VV1_0005 c5c460842671227a7dca9d479154747f 114 SUPERFAMILY SSF46689 17 99 6.18E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 Hamap MF_01201 Alanine racemase. 41 407 25.985 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 SUPERFAMILY SSF51419 48 281 1.14E-47 T 14-10-2018 IPR029066 PLP-binding barrel VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 72 82 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 TIGRFAM TIGR00492 alr: alanine racemase 44 407 1.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 SMART SM01005 279 407 2.3E-41 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 Gene3D G3DSA:2.40.37.10 44 403 1.5E-128 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 Pfam PF00842 Alanine racemase, C-terminal domain 280 406 3.5E-31 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 Pfam PF01168 Alanine racemase, N-terminal domain 48 271 2.8E-50 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 PRINTS PR00992 Alanine racemase signature 201 212 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 PRINTS PR00992 Alanine racemase signature 244 271 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 PRINTS PR00992 Alanine racemase signature 333 350 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 PRINTS PR00992 Alanine racemase signature 312 327 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 PRINTS PR00992 Alanine racemase signature 67 83 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 PRINTS PR00992 Alanine racemase signature 103 121 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 PRINTS PR00992 Alanine racemase signature 165 177 3.2E-30 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 Gene3D G3DSA:3.20.20.10 50 267 1.5E-128 T 14-10-2018 IPR029066 PLP-binding barrel VV2_0478 fb5d8e74c6b6be83f42bdb7cdfc417e2 408 SUPERFAMILY SSF50621 272 407 3.21E-39 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV2_0914 a44955835825c54cf601f6adad968df8 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.2E-60 T 14-10-2018 VV2_0914 a44955835825c54cf601f6adad968df8 253 SUPERFAMILY SSF51735 9 251 1.62E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0914 a44955835825c54cf601f6adad968df8 253 Gene3D G3DSA:3.40.50.720 1 252 8.4E-83 T 14-10-2018 VV2_0914 a44955835825c54cf601f6adad968df8 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.3E-134 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0914 a44955835825c54cf601f6adad968df8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2038 10bc247de679a50c8de921b652ee8c7a 76 Gene3D G3DSA:1.10.260.40 1 74 4.2E-13 T 14-10-2018 VV1_2038 10bc247de679a50c8de921b652ee8c7a 76 Pfam PF01381 Helix-turn-helix 14 66 6.7E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_2038 10bc247de679a50c8de921b652ee8c7a 76 SMART SM00530 11 66 1.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_2038 10bc247de679a50c8de921b652ee8c7a 76 SUPERFAMILY SSF47413 2 70 1.18E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 Pfam PF12852 Cupin 3 165 2.4E-34 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 Gene3D G3DSA:1.10.10.60 175 282 7.1E-28 T 14-10-2018 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 SUPERFAMILY SSF46689 180 231 3.64E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 SUPERFAMILY SSF46689 233 282 8.06E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 Pfam PF12833 Helix-turn-helix domain 204 281 1.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 SUPERFAMILY SSF51215 30 163 1.19E-11 T 14-10-2018 IPR037923 Transcription regulator HTH-like VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 SMART SM00342 197 280 2.0E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1046 5677cd561ea7f8c986a6816023cb0fd9 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV1_1450 1d14f57a348d50bb2b62e434a0853612 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 4.7E-89 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VV1_1450 1d14f57a348d50bb2b62e434a0853612 296 Gene3D G3DSA:2.40.10.350 180 257 3.2E-36 T 14-10-2018 VV1_1450 1d14f57a348d50bb2b62e434a0853612 296 Gene3D G3DSA:2.40.10.340 121 266 3.2E-36 T 14-10-2018 VV1_1450 1d14f57a348d50bb2b62e434a0853612 296 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-38 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VV1_1450 1d14f57a348d50bb2b62e434a0853612 296 PIRSF PIRSF038471 2 283 2.5E-80 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 Pfam PF07719 Tetratricopeptide repeat 219 249 9.6E-8 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 Gene3D G3DSA:1.25.40.10 167 339 2.4E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 SUPERFAMILY SSF48452 55 325 4.93E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 Gene3D G3DSA:1.25.40.10 45 162 5.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 Pfam PF13432 Tetratricopeptide repeat 91 148 3.2E-6 T 14-10-2018 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 Pfam PF13432 Tetratricopeptide repeat 180 214 0.012 T 14-10-2018 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 SMART SM00028 216 249 4.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 SMART SM00028 280 313 1.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 SMART SM00028 87 120 6.1E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 SMART SM00028 121 154 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 SMART SM00028 182 215 0.05 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1758 8430065f137d6b5f316a49447a75ddfd 346 Pfam PF13181 Tetratricopeptide repeat 281 308 0.018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 7.7E-137 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 Pfam PF00764 Arginosuccinate synthase 10 396 1.0E-145 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 Gene3D G3DSA:3.40.50.620 9 177 1.3E-145 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 Gene3D G3DSA:1.20.5.470 368 402 7.7E-8 T 14-10-2018 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 52.007 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 Gene3D G3DSA:3.90.1260.10 68 356 1.3E-145 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 SUPERFAMILY SSF69864 177 402 4.05E-87 T 14-10-2018 VV1_1373 b0c692d0c98357d72c61946582e3b5bb 403 SUPERFAMILY SSF52402 7 170 2.43E-47 T 14-10-2018 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 Gene3D G3DSA:3.40.50.720 1 208 4.7E-87 T 14-10-2018 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.988 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 Gene3D G3DSA:1.10.1040.10 209 494 2.5E-121 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 5.6E-125 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF48179 210 341 4.08E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 6.1E-60 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF48179 348 487 1.87E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 1.2E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.4E-16 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VV1_1077 815e40ea74c8b9329fe92e8cb047b063 494 SUPERFAMILY SSF51735 27 209 7.05E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0495 acb537064620a93267cfb010c005213d 129 Pfam PF13411 MerR HTH family regulatory protein 4 69 6.0E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0495 acb537064620a93267cfb010c005213d 129 SMART SM00422 4 71 1.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV2_0495 acb537064620a93267cfb010c005213d 129 Gene3D G3DSA:1.10.1660.10 1 128 2.2E-26 T 14-10-2018 VV2_0495 acb537064620a93267cfb010c005213d 129 SUPERFAMILY SSF46955 4 118 2.05E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 Pfam PF13426 PAS domain 398 499 2.2E-12 T 14-10-2018 IPR000014 PAS domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SUPERFAMILY SSF55785 267 380 4.54E-22 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SUPERFAMILY SSF55785 398 510 1.74E-22 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 508 672 8.3E-45 T 14-10-2018 IPR000160 GGDEF domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SMART SM00086 459 501 3.4 T 14-10-2018 IPR001610 PAC motif VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SMART SM00086 336 379 2.7E-10 T 14-10-2018 IPR001610 PAC motif VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 Gene3D G3DSA:3.30.450.20 387 510 8.3E-27 T 14-10-2018 VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 508 1.4E-16 T 14-10-2018 IPR000014 PAS domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 259 386 3.4E-12 T 14-10-2018 IPR000014 PAS domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 Gene3D G3DSA:3.30.450.20 258 327 6.3E-15 T 14-10-2018 VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 Gene3D G3DSA:3.30.70.270 511 684 2.6E-60 T 14-10-2018 VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 669 8.8E-52 T 14-10-2018 IPR000160 GGDEF domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SUPERFAMILY SSF55073 517 676 2.82E-51 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 Pfam PF08447 PAS fold 285 373 1.2E-22 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SMART SM00091 260 329 0.035 T 14-10-2018 IPR000014 PAS domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SMART SM00091 387 456 3.4E-5 T 14-10-2018 IPR000014 PAS domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 SMART SM00267 501 674 2.3E-68 T 14-10-2018 IPR000160 GGDEF domain VV2_0871 dd73ce4607726fe9419d2aee8ff026bb 685 Gene3D G3DSA:2.10.70.100 333 380 4.0E-12 T 14-10-2018 VV1_1874 1aa3ae29fd11cf290d33deb1c5ff17e3 207 Pfam PF01351 Ribonuclease HII 22 198 8.9E-40 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain VV1_1874 1aa3ae29fd11cf290d33deb1c5ff17e3 207 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 37.927 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 VV1_1874 1aa3ae29fd11cf290d33deb1c5ff17e3 207 SUPERFAMILY SSF53098 14 204 1.97E-71 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_1874 1aa3ae29fd11cf290d33deb1c5ff17e3 207 Gene3D G3DSA:3.30.420.10 4 207 4.7E-80 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Gene3D G3DSA:3.10.580.10 680 817 3.0E-13 T 14-10-2018 VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 SMART SM00091 127 193 2.1E-5 T 14-10-2018 IPR000014 PAS domain VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Pfam PF00563 EAL domain 424 657 2.6E-56 T 14-10-2018 IPR001633 EAL domain VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 SUPERFAMILY SSF141868 422 666 8.76E-65 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Gene3D G3DSA:3.30.450.20 118 237 1.3E-16 T 14-10-2018 VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 SUPERFAMILY SSF55785 126 235 1.24E-14 T 14-10-2018 IPR035965 PAS domain superfamily VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Gene3D G3DSA:3.20.20.450 414 672 3.1E-67 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Pfam PF00571 CBS domain 698 735 0.0071 T 14-10-2018 IPR000644 CBS domain VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Pfam PF00571 CBS domain 764 817 9.0E-4 T 14-10-2018 IPR000644 CBS domain VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Pfam PF00989 PAS fold 129 224 4.4E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 SUPERFAMILY SSF54631 690 817 2.02E-13 T 14-10-2018 VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 Gene3D G3DSA:3.30.70.270 251 410 3.8E-6 T 14-10-2018 VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 239 1.4E-7 T 14-10-2018 IPR000014 PAS domain VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 SUPERFAMILY SSF55073 254 406 4.0E-5 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2214 a3f51c99e3d0cdf10d5744a6f46c5502 822 SMART SM00052 415 662 5.7E-60 T 14-10-2018 IPR001633 EAL domain VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 Gene3D G3DSA:3.30.420.40 129 293 1.4E-131 T 14-10-2018 VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.5E-50 T 14-10-2018 IPR017861 Kae1/TsaD family VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 9.6E-125 T 14-10-2018 IPR017861 Kae1/TsaD family VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 Pfam PF00814 Glycoprotease family 24 307 1.6E-103 T 14-10-2018 IPR000905 Gcp-like domain VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 SUPERFAMILY SSF53067 1 311 3.89E-43 T 14-10-2018 VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 Gene3D G3DSA:3.30.420.40 3 315 1.4E-131 T 14-10-2018 VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.3E-134 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VV1_0628 2152cc5bc0e2f20e59c02c41d7689d9c 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.67 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VV1_1109 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:1.10.10.10 4 59 9.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1109 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF46785 7 68 9.7E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1109 696352469e86ac92a0062087aa898da7 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_1109 696352469e86ac92a0062087aa898da7 154 SMART SM00344 8 115 2.2E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV1_1109 696352469e86ac92a0062087aa898da7 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV1_1109 696352469e86ac92a0062087aa898da7 154 Gene3D G3DSA:3.30.70.920 60 142 2.0E-31 T 14-10-2018 VV1_1109 696352469e86ac92a0062087aa898da7 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.7E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_1109 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.6E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_1109 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.6E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_1109 696352469e86ac92a0062087aa898da7 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.6E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_1900 2bae8099a4323100e809d2604e5c1618 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 2.5E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain VV1_1900 2bae8099a4323100e809d2604e5c1618 346 Gene3D G3DSA:3.90.650.10 172 346 1.6E-72 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_1900 2bae8099a4323100e809d2604e5c1618 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.7E-151 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1900 2bae8099a4323100e809d2604e5c1618 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.658 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VV1_1900 2bae8099a4323100e809d2604e5c1618 346 SUPERFAMILY SSF56042 172 342 8.07E-61 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VV1_1900 2bae8099a4323100e809d2604e5c1618 346 SUPERFAMILY SSF55326 8 171 1.94E-54 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV1_1900 2bae8099a4323100e809d2604e5c1618 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 338 1.3E-38 T 14-10-2018 IPR010918 PurM-like, C-terminal domain VV1_1900 2bae8099a4323100e809d2604e5c1618 346 Gene3D G3DSA:3.30.1330.10 7 171 1.4E-70 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 Gene3D G3DSA:3.50.50.60 213 510 5.9E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 SUPERFAMILY SSF52833 1 101 2.12E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 1.2E-34 T 14-10-2018 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 1.2E-34 T 14-10-2018 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.2E-34 T 14-10-2018 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 1.2E-34 T 14-10-2018 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 1.2E-34 T 14-10-2018 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 SUPERFAMILY SSF52833 104 197 4.09E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 Gene3D G3DSA:3.40.30.80 1 200 1.2E-64 T 14-10-2018 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 3.6E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 Pfam PF13192 Thioredoxin domain 120 195 3.9E-11 T 14-10-2018 IPR012336 Thioredoxin-like fold VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 Gene3D G3DSA:3.50.50.60 328 451 5.9E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 9.5E-43 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 PIRSF PIRSF000238 1 522 3.6E-258 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 SUPERFAMILY SSF51905 204 516 3.18E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0502 e94b23f5266fa5b501862d37a67037ed 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 4.1E-255 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 VV1_0708 c027255cd32bf4257e3e4c1778a8e1e5 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.5E-53 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VV1_0708 c027255cd32bf4257e3e4c1778a8e1e5 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VV1_0708 c027255cd32bf4257e3e4c1778a8e1e5 176 Gene3D G3DSA:3.90.80.10 1 175 6.5E-68 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VV1_0708 c027255cd32bf4257e3e4c1778a8e1e5 176 SUPERFAMILY SSF50324 3 174 1.96E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VV1_0708 c027255cd32bf4257e3e4c1778a8e1e5 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.518 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VV2_1502 e7542293dd1abf02b42ec85624dfa672 394 SMART SM00849 111 305 5.5E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_1502 e7542293dd1abf02b42ec85624dfa672 394 SUPERFAMILY SSF56281 93 333 3.08E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1502 e7542293dd1abf02b42ec85624dfa672 394 Gene3D G3DSA:3.60.15.10 89 330 1.1E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1502 e7542293dd1abf02b42ec85624dfa672 394 Pfam PF00753 Metallo-beta-lactamase superfamily 112 284 8.1E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_3078 4b4a79e001561c41c8de0cfb419469d3 331 SMART SM00382 47 240 3.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_3078 4b4a79e001561c41c8de0cfb419469d3 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 309 9.7E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_3078 4b4a79e001561c41c8de0cfb419469d3 331 Gene3D G3DSA:3.40.50.300 7 331 4.2E-98 T 14-10-2018 VV1_3078 4b4a79e001561c41c8de0cfb419469d3 331 Pfam PF00005 ABC transporter 39 190 9.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_3078 4b4a79e001561c41c8de0cfb419469d3 331 SUPERFAMILY SSF52540 10 262 4.46E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3078 4b4a79e001561c41c8de0cfb419469d3 331 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_3078 4b4a79e001561c41c8de0cfb419469d3 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 2.6E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.2E-19 T 14-10-2018 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.2E-19 T 14-10-2018 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.2E-19 T 14-10-2018 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.2E-19 T 14-10-2018 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 Gene3D G3DSA:3.50.50.60 6 339 1.1E-120 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 4.1E-136 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 Gene3D G3DSA:3.30.9.50 80 270 1.1E-120 T 14-10-2018 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 Pfam PF01494 FAD binding domain 5 347 2.2E-28 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VV1_1553 e22a7c08f28fd3ea8aa355ad2878642a 410 SUPERFAMILY SSF51905 5 386 1.48E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2166 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 9.3E-38 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VV1_2166 3b269f458c629d3ca685a0ad9579ed5c 139 Pfam PF03061 Thioesterase superfamily 22 107 5.9E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VV1_2166 3b269f458c629d3ca685a0ad9579ed5c 139 Gene3D G3DSA:3.10.129.10 2 137 1.6E-41 T 14-10-2018 VV1_2166 3b269f458c629d3ca685a0ad9579ed5c 139 SUPERFAMILY SSF54637 6 134 1.83E-40 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_2166 3b269f458c629d3ca685a0ad9579ed5c 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 132 1.8E-49 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 VV1_2166 3b269f458c629d3ca685a0ad9579ed5c 139 PIRSF PIRSF003230 2 138 1.0E-46 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VV2_1463 99ddfaf95f8244e707b4847cb5eae1e0 425 Pfam PF11301 Protein of unknown function (DUF3103) 66 423 5.3E-182 T 14-10-2018 IPR021452 Protein of unknown function DUF3103 VV1_1642 7b18960820dc4c2512dcab8e42e66916 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 6.6E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VV1_1642 7b18960820dc4c2512dcab8e42e66916 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.686 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VV1_1642 7b18960820dc4c2512dcab8e42e66916 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 3.8E-100 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VV1_1642 7b18960820dc4c2512dcab8e42e66916 301 SUPERFAMILY SSF52374 1 281 2.09E-105 T 14-10-2018 VV1_1642 7b18960820dc4c2512dcab8e42e66916 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.3E-104 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VV1_1642 7b18960820dc4c2512dcab8e42e66916 301 Gene3D G3DSA:3.40.50.620 1 179 2.3E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1642 7b18960820dc4c2512dcab8e42e66916 301 Gene3D G3DSA:3.30.1300.10 181 283 6.2E-27 T 14-10-2018 VV1_1901 63904c8cdc64ac5c56190d86da152a0e 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.298 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VV1_1901 63904c8cdc64ac5c56190d86da152a0e 208 SUPERFAMILY SSF53271 3 206 2.49E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV1_1901 63904c8cdc64ac5c56190d86da152a0e 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.1E-64 T 14-10-2018 VV1_1901 63904c8cdc64ac5c56190d86da152a0e 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 7.7E-92 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VV1_1901 63904c8cdc64ac5c56190d86da152a0e 208 Gene3D G3DSA:3.40.50.2020 1 208 4.8E-73 T 14-10-2018 VV2_0843 0ceda5fb87159e2ead4eef4e55749724 685 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 179 3.4E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV2_0843 0ceda5fb87159e2ead4eef4e55749724 685 Gene3D G3DSA:2.40.170.20 57 685 1.4E-92 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV2_0843 0ceda5fb87159e2ead4eef4e55749724 685 Pfam PF00593 TonB dependent receptor 296 683 3.4E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV2_0843 0ceda5fb87159e2ead4eef4e55749724 685 SUPERFAMILY SSF56935 47 685 4.4E-94 T 14-10-2018 VV1_1615 2dacc31f60680994300ac18093cebc3c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1615 2dacc31f60680994300ac18093cebc3c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.0E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1615 2dacc31f60680994300ac18093cebc3c 82 Gene3D G3DSA:3.30.1320.10 1 82 1.8E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1615 2dacc31f60680994300ac18093cebc3c 82 SUPERFAMILY SSF54565 1 76 2.62E-27 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1615 2dacc31f60680994300ac18093cebc3c 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-22 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1615 2dacc31f60680994300ac18093cebc3c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.804 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 SUPERFAMILY SSF55681 97 464 2.79E-94 T 14-10-2018 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.768 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 2.7E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.5E-80 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 Gene3D G3DSA:2.40.50.140 3 105 3.3E-19 T 14-10-2018 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.3E-205 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.5E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 Gene3D G3DSA:3.30.930.10 109 465 2.7E-108 T 14-10-2018 VV1_2254 48aca24128ba05cd3410f7d81a33556a 466 SUPERFAMILY SSF50249 15 101 6.0E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0089 da24a914c551dfb92f82819119741510 136 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 92 9.2E-12 T 14-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative VV1_0445 7459d74acef59e9f89ab18f437cb2c1f 412 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 37 400 57.61 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VV1_0445 7459d74acef59e9f89ab18f437cb2c1f 412 SUPERFAMILY SSF51713 36 400 1.96E-164 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VV1_0445 7459d74acef59e9f89ab18f437cb2c1f 412 Pfam PF01702 Queuine tRNA-ribosyltransferase 162 397 1.6E-96 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VV1_0445 7459d74acef59e9f89ab18f437cb2c1f 412 Gene3D G3DSA:3.20.20.105 29 404 4.3E-175 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VV1_0445 7459d74acef59e9f89ab18f437cb2c1f 412 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 39 404 1.7E-178 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VV1_0445 7459d74acef59e9f89ab18f437cb2c1f 412 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 39 405 3.2E-187 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VV2_0833 dfd9469dbd439d675bf0ec7cf961e101 356 PIRSF PIRSF001361 4 351 8.1E-148 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV2_0833 dfd9469dbd439d675bf0ec7cf961e101 356 Gene3D G3DSA:3.20.20.70 8 347 2.3E-135 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0833 dfd9469dbd439d675bf0ec7cf961e101 356 Pfam PF00793 DAHP synthetase I family 44 337 2.6E-85 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV2_0833 dfd9469dbd439d675bf0ec7cf961e101 356 SUPERFAMILY SSF51569 12 346 8.37E-116 T 14-10-2018 VV2_0833 dfd9469dbd439d675bf0ec7cf961e101 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 16 345 7.5E-133 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV2_0280 71986fef0143e25897d3353a244b8f61 331 Gene3D G3DSA:3.40.50.20 18 327 1.8E-78 T 14-10-2018 VV2_0280 71986fef0143e25897d3353a244b8f61 331 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 84 95 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0280 71986fef0143e25897d3353a244b8f61 331 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 331 32.341 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0280 71986fef0143e25897d3353a244b8f61 331 Gene3D G3DSA:3.30.1490.20 133 200 1.8E-78 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV2_0280 71986fef0143e25897d3353a244b8f61 331 Pfam PF01820 D-ala D-ala ligase N-terminus 4 107 3.9E-20 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0280 71986fef0143e25897d3353a244b8f61 331 Gene3D G3DSA:3.30.470.20 106 321 1.8E-78 T 14-10-2018 VV2_0280 71986fef0143e25897d3353a244b8f61 331 Pfam PF07478 D-ala D-ala ligase C-terminus 127 327 3.0E-54 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0280 71986fef0143e25897d3353a244b8f61 331 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 329 1.2E-98 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0280 71986fef0143e25897d3353a244b8f61 331 PIRSF PIRSF039102 1 331 5.9E-78 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0280 71986fef0143e25897d3353a244b8f61 331 SUPERFAMILY SSF56059 117 328 1.73E-43 T 14-10-2018 VV2_0280 71986fef0143e25897d3353a244b8f61 331 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 273 301 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV2_0280 71986fef0143e25897d3353a244b8f61 331 SUPERFAMILY SSF52440 4 116 1.44E-25 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 20 800 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 Gene3D G3DSA:3.20.20.60 491 801 2.0E-106 T 14-10-2018 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 PIRSF PIRSF000854 13 804 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 Gene3D G3DSA:3.30.470.20 207 370 1.9E-57 T 14-10-2018 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 Gene3D G3DSA:3.50.30.10 372 490 3.6E-41 T 14-10-2018 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 SUPERFAMILY SSF52009 362 480 1.96E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 Pfam PF00391 PEP-utilising enzyme, mobile domain 398 468 1.8E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 31 356 6.6E-118 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 707 725 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 495 798 3.7E-64 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 427 438 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 Gene3D G3DSA:3.30.1490.20 15 206 8.1E-73 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 724 739 1.3E-5 T 14-10-2018 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 760 772 1.3E-5 T 14-10-2018 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 707 722 1.3E-5 T 14-10-2018 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 SUPERFAMILY SSF56059 14 397 1.65E-109 T 14-10-2018 VV2_0005 70b835ffda7ed2650ec43905373fc7c2 804 SUPERFAMILY SSF51621 474 803 4.97E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VV2_0083 c7267f4e7d1d73c0376e98d96b628f9d 283 Gene3D G3DSA:1.10.10.10 3 89 8.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0083 c7267f4e7d1d73c0376e98d96b628f9d 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 4.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0083 c7267f4e7d1d73c0376e98d96b628f9d 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0083 c7267f4e7d1d73c0376e98d96b628f9d 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0083 c7267f4e7d1d73c0376e98d96b628f9d 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0083 c7267f4e7d1d73c0376e98d96b628f9d 283 SUPERFAMILY SSF46785 6 110 6.96E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0227 458001488bfec8d635143c859dd53586 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VV1_0227 458001488bfec8d635143c859dd53586 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.8E-68 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VV1_0227 458001488bfec8d635143c859dd53586 275 Gene3D G3DSA:3.40.50.150 75 274 1.0E-59 T 14-10-2018 VV1_0227 458001488bfec8d635143c859dd53586 275 SMART SM00138 8 272 2.1E-133 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV1_0227 458001488bfec8d635143c859dd53586 275 SUPERFAMILY SSF53335 76 269 6.47E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0227 458001488bfec8d635143c859dd53586 275 Gene3D G3DSA:1.10.155.10 1 74 8.1E-11 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VV1_0227 458001488bfec8d635143c859dd53586 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 14-10-2018 VV1_0227 458001488bfec8d635143c859dd53586 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV1_0227 458001488bfec8d635143c859dd53586 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV1_0227 458001488bfec8d635143c859dd53586 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV1_0227 458001488bfec8d635143c859dd53586 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV1_0227 458001488bfec8d635143c859dd53586 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV1_0227 458001488bfec8d635143c859dd53586 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.9E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 Pfam PF00072 Response regulator receiver domain 516 627 9.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 469 6.6E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 3.5E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 SUPERFAMILY SSF55874 298 470 6.55E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 146 2.3E-16 T 14-10-2018 IPR033414 Periplasmic sensor domain VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 SUPERFAMILY SSF52172 514 632 7.54E-35 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 SUPERFAMILY SSF47384 229 311 3.53E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 Gene3D G3DSA:3.40.50.12740 513 645 2.9E-38 T 14-10-2018 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 SMART SM00448 513 627 2.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 SMART SM00388 244 309 3.9E-27 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 SMART SM00387 356 472 2.0E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 Gene3D G3DSA:3.30.565.10 308 472 7.9E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1182 2e7207cd6e97b844454753ac0a54ce06 646 Gene3D G3DSA:1.10.287.130 210 307 5.0E-30 T 14-10-2018 VV2_0333 4b5d5a17063402248eaedb99493751ea 205 Pfam PF05618 Putative ATP-dependant zinc protease 68 202 7.4E-43 T 14-10-2018 VV2_0333 4b5d5a17063402248eaedb99493751ea 205 SUPERFAMILY SSF50630 68 199 2.67E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VV2_0333 4b5d5a17063402248eaedb99493751ea 205 Gene3D G3DSA:2.40.70.10 65 192 3.3E-39 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VV1_2417 f28421d8f3f500cfbd007ee83860fe3d 223 Pfam PF03703 Bacterial PH domain 113 170 9.2E-10 T 14-10-2018 IPR005182 Domain of unknown function DUF304 VV1_0823 e92989b1f1b25736b8b56be82d15c652 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0823 e92989b1f1b25736b8b56be82d15c652 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0823 e92989b1f1b25736b8b56be82d15c652 56 SUPERFAMILY SSF57829 3 54 7.94E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VV1_0823 e92989b1f1b25736b8b56be82d15c652 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.6E-26 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0823 e92989b1f1b25736b8b56be82d15c652 56 Pfam PF00471 Ribosomal protein L33 8 54 3.4E-17 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0823 e92989b1f1b25736b8b56be82d15c652 56 Gene3D G3DSA:2.20.28.120 1 56 4.9E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 PIRSF PIRSF005901 1 188 1.1E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.40.50.140 131 188 1.5E-21 T 14-10-2018 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 122 1.2E-12 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 SMART SM00841 132 187 1.6E-28 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 7.7E-21 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.40.50.140 67 130 8.1E-14 T 14-10-2018 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 SMART SM01185 69 124 1.9E-13 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 Gene3D G3DSA:2.30.30.30 1 65 1.0E-14 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 8.1E-91 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50104 1 65 5.96E-12 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.202 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 6.2E-18 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50249 67 129 5.14E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_3058 919a5eb0e444ccf0b1e533a349441311 188 SUPERFAMILY SSF50249 132 188 1.4E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_1210 ad9b08c62beedf4c96c8e230cca32099 272 Gene3D G3DSA:1.25.40.10 115 256 2.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1616 b64325c14feb68c120b0d3162ca6f73b 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 160 7.2E-33 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VV2_1616 b64325c14feb68c120b0d3162ca6f73b 167 PIRSF PIRSF030840 1 167 4.2E-64 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VV2_1616 b64325c14feb68c120b0d3162ca6f73b 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 161 9.2E-63 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like VV2_1616 b64325c14feb68c120b0d3162ca6f73b 167 Gene3D G3DSA:3.40.1570.10 1 167 1.7E-60 T 14-10-2018 VV2_1616 b64325c14feb68c120b0d3162ca6f73b 167 SUPERFAMILY SSF144064 1 164 4.71E-56 T 14-10-2018 VV2_0729 806cc19c9399ffa2f1e12b7c605cebac 278 SUPERFAMILY SSF53697 100 268 7.72E-31 T 14-10-2018 VV2_0729 806cc19c9399ffa2f1e12b7c605cebac 278 Pfam PF01380 SIS domain 129 251 1.4E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV2_0729 806cc19c9399ffa2f1e12b7c605cebac 278 Gene3D G3DSA:3.40.50.10490 91 278 2.3E-48 T 14-10-2018 VV2_0729 806cc19c9399ffa2f1e12b7c605cebac 278 Gene3D G3DSA:1.10.10.10 1 81 1.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0729 806cc19c9399ffa2f1e12b7c605cebac 278 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 1.2E-19 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VV2_0729 806cc19c9399ffa2f1e12b7c605cebac 278 SUPERFAMILY SSF46689 5 80 8.96E-22 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 Gene3D G3DSA:3.40.30.10 41 144 1.5E-33 T 14-10-2018 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 Gene3D G3DSA:2.20.28.140 2 37 7.5E-15 T 14-10-2018 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 PIRSF PIRSF000077 38 142 1.8E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 PRINTS PR00421 Thioredoxin family signature 58 66 2.4E-7 T 14-10-2018 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 PRINTS PR00421 Thioredoxin family signature 106 117 2.4E-7 T 14-10-2018 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 PRINTS PR00421 Thioredoxin family signature 66 75 2.4E-7 T 14-10-2018 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 3.9E-35 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 SUPERFAMILY SSF52833 29 142 2.7E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0350 c9c0f8711fb93aa67040e62a8d695d52 144 Pfam PF00085 Thioredoxin 43 140 1.3E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 ProSitePatterns PS00802 Transketolase signature 2. 473 489 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 Pfam PF02779 Transketolase, pyrimidine binding domain 360 530 3.8E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 SUPERFAMILY SSF52922 539 670 8.77E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 Pfam PF02780 Transketolase, C-terminal domain 547 661 4.1E-21 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 SUPERFAMILY SSF52518 339 532 8.84E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 ProSitePatterns PS00801 Transketolase signature 1. 18 38 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 SMART SM00861 360 531 1.1E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 SUPERFAMILY SSF52518 10 325 3.07E-119 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 Gene3D G3DSA:3.40.50.920 544 670 3.5E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 TIGRFAM TIGR00232 tktlase_bact: transketolase 11 669 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 Gene3D G3DSA:3.40.50.970 8 331 2.3E-130 T 14-10-2018 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 Gene3D G3DSA:3.40.50.970 332 543 8.3E-86 T 14-10-2018 VV1_1537 be7703a6e46c64aa9a32388b548b76b5 670 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 339 3.2E-166 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VV2_1680 fb366b64a861073e99b600cfae1559d8 172 Gene3D G3DSA:3.90.79.10 13 150 9.7E-25 T 14-10-2018 VV2_1680 fb366b64a861073e99b600cfae1559d8 172 SUPERFAMILY SSF55811 9 142 2.03E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV2_1680 fb366b64a861073e99b600cfae1559d8 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV2_1680 fb366b64a861073e99b600cfae1559d8 172 Pfam PF00293 NUDIX domain 23 143 6.4E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV2_0434 cf6459485e9f3f2cb31248aa2d2206b1 267 Gene3D G3DSA:1.25.40.10 5 87 1.9E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0434 cf6459485e9f3f2cb31248aa2d2206b1 267 PIRSF PIRSF029288 1 265 6.2E-94 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type VV2_0434 cf6459485e9f3f2cb31248aa2d2206b1 267 Pfam PF07024 ImpE protein 140 258 5.0E-34 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type VV2_0434 cf6459485e9f3f2cb31248aa2d2206b1 267 SUPERFAMILY SSF144059 3 262 1.03E-84 T 14-10-2018 VV1_3119 f715e0fb717eb9c7e8775f87cacf228c 444 Gene3D G3DSA:1.20.120.160 328 439 5.3E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_3119 f715e0fb717eb9c7e8775f87cacf228c 444 SUPERFAMILY SSF47226 332 437 1.83E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_3119 f715e0fb717eb9c7e8775f87cacf228c 444 Pfam PF01627 Hpt domain 351 427 1.9E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV2_0594 99fbad6ccf9bafe5f94babaffd912752 477 Gene3D G3DSA:3.30.1490.130 283 339 2.4E-171 T 14-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 VV2_0594 99fbad6ccf9bafe5f94babaffd912752 477 Gene3D G3DSA:2.30.40.10 2 427 2.4E-171 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0594 99fbad6ccf9bafe5f94babaffd912752 477 Gene3D G3DSA:3.20.20.140 55 414 2.4E-171 T 14-10-2018 VV2_0594 99fbad6ccf9bafe5f94babaffd912752 477 SUPERFAMILY SSF51338 2 468 1.89E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0594 99fbad6ccf9bafe5f94babaffd912752 477 SUPERFAMILY SSF51556 56 414 1.56E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV2_0594 99fbad6ccf9bafe5f94babaffd912752 477 Pfam PF07969 Amidohydrolase family 45 455 4.0E-42 T 14-10-2018 IPR013108 Amidohydrolase 3 VV1_1397 951d73aa55a889fc3c8e1aef13cc6a58 153 SUPERFAMILY SSF103039 1 153 7.19E-38 T 14-10-2018 IPR028976 CheC-like superfamily VV1_1397 951d73aa55a889fc3c8e1aef13cc6a58 153 Gene3D G3DSA:3.40.1550.10 1 153 6.1E-46 T 14-10-2018 IPR028976 CheC-like superfamily VV1_1397 951d73aa55a889fc3c8e1aef13cc6a58 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 5.1E-22 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VV1_1134 480791e59640ae2e69b1d3635c749d61 516 PIRSF PIRSF028175 1 516 0.0 T 14-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 267 321 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 Gene3D G3DSA:1.20.210.10 25 543 2.1E-219 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 47 489 2.1E-151 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 38 63 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 326 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 448 469 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 286 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 155 167 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 370 388 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 417 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 214 233 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 85 108 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 335 356 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 203 8.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 SUPERFAMILY SSF81442 36 542 6.02E-194 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0567 6e708fb0c14fd9ffac8ec4a30a3149b1 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 39 542 8.5E-214 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VV2_0485 4a9574f2e637af13168a9762f30a22d0 230 Gene3D G3DSA:3.40.190.10 87 184 2.9E-28 T 14-10-2018 VV2_0485 4a9574f2e637af13168a9762f30a22d0 230 Gene3D G3DSA:3.40.190.10 14 219 2.9E-28 T 14-10-2018 VV2_0485 4a9574f2e637af13168a9762f30a22d0 230 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 221 4.5E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0485 4a9574f2e637af13168a9762f30a22d0 230 SUPERFAMILY SSF53850 3 221 2.1E-36 T 14-10-2018 VV1_0578 76733686282a8f3c8b9493ed3432b374 355 Gene3D G3DSA:3.40.50.2000 161 318 4.1E-119 T 14-10-2018 VV1_0578 76733686282a8f3c8b9493ed3432b374 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 334 1.9E-32 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VV1_0578 76733686282a8f3c8b9493ed3432b374 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 1.9E-46 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0578 76733686282a8f3c8b9493ed3432b374 355 Gene3D G3DSA:3.40.50.2000 8 160 4.1E-119 T 14-10-2018 VV1_0578 76733686282a8f3c8b9493ed3432b374 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.387 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0578 76733686282a8f3c8b9493ed3432b374 355 SUPERFAMILY SSF53756 5 352 1.61E-123 T 14-10-2018 VV1_0578 76733686282a8f3c8b9493ed3432b374 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 3.0E-116 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 SUPERFAMILY SSF51445 32 411 1.9E-62 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 SMART SM00642 24 382 1.2E-41 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 Pfam PF00128 Alpha amylase, catalytic domain 48 255 1.2E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 SUPERFAMILY SSF51011 404 464 4.68E-5 T 14-10-2018 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 Gene3D G3DSA:3.20.20.80 20 387 4.2E-83 T 14-10-2018 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 240 258 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 98 109 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 211 222 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 65 82 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_0400 a1d386489715b9d3373446fc61d6ea76 466 PRINTS PR00110 Alpha-amylase signature 306 318 4.4E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 Gene3D G3DSA:1.10.10.1800 459 550 9.4E-32 T 14-10-2018 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.469 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 Gene3D G3DSA:3.50.50.60 1 231 3.4E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 Gene3D G3DSA:3.50.50.60 296 458 6.3E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 SUPERFAMILY SSF51905 6 261 5.52E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 Gene3D G3DSA:1.10.150.570 569 623 4.0E-23 T 14-10-2018 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 621 1.0E-293 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 Pfam PF13932 GidA associated domain 403 616 3.0E-76 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 Pfam PF01134 Glucose inhibited division protein A 8 399 9.6E-170 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VV1_1010 e7c78124755dc3b627cba0144fbba1c6 632 SMART SM01228 546 617 1.1E-43 T 14-10-2018 VV1_2983 775e880d27e5b25d5775057e9a369c3b 226 SUPERFAMILY SSF52540 6 223 2.93E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2983 775e880d27e5b25d5775057e9a369c3b 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.5E-85 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VV1_2983 775e880d27e5b25d5775057e9a369c3b 226 Gene3D G3DSA:3.40.50.300 1 226 1.7E-83 T 14-10-2018 VV1_2983 775e880d27e5b25d5775057e9a369c3b 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.6 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VV1_2983 775e880d27e5b25d5775057e9a369c3b 226 Pfam PF02224 Cytidylate kinase 8 221 1.7E-78 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VV1_3120 ac580598a64dd6c720854cbbb35681cf 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.0E-98 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VV1_3120 ac580598a64dd6c720854cbbb35681cf 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 47.895 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 SMART SM00490 316 416 7.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Gene3D G3DSA:3.40.50.300 266 433 2.0E-55 T 14-10-2018 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Pfam PF04408 Helicase associated domain (HA2) 478 569 1.4E-19 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 634 710 4.8E-22 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Pfam PF00270 DEAD/DEAH box helicase 101 246 2.4E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 SUPERFAMILY SSF52540 87 610 1.69E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Gene3D G3DSA:3.40.50.300 40 265 4.6E-78 T 14-10-2018 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Pfam PF00271 Helicase conserved C-terminal domain 302 415 3.1E-11 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Pfam PF11898 Domain of unknown function (DUF3418) 724 1308 5.0E-232 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 Gene3D G3DSA:1.20.120.1080 460 562 8.1E-20 T 14-10-2018 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 SMART SM00487 85 272 1.9E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 SMART SM00382 105 396 3.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 27 1308 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 VV1_2343 f5539346b7ddaac73a5356a3bf387498 1310 SMART SM00847 476 571 1.4E-39 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VV1_0899 213745a07c56b13f840656b4479fbdc5 205 Gene3D G3DSA:1.10.760.10 19 108 6.8E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_0899 213745a07c56b13f840656b4479fbdc5 205 SUPERFAMILY SSF46626 114 203 6.06E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_0899 213745a07c56b13f840656b4479fbdc5 205 Pfam PF00034 Cytochrome c 117 201 7.5E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_0899 213745a07c56b13f840656b4479fbdc5 205 Pfam PF00034 Cytochrome c 25 103 1.4E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_0899 213745a07c56b13f840656b4479fbdc5 205 Gene3D G3DSA:1.10.760.10 109 205 1.6E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_0899 213745a07c56b13f840656b4479fbdc5 205 PIRSF PIRSF000005 1 205 4.8E-65 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VV1_0899 213745a07c56b13f840656b4479fbdc5 205 SUPERFAMILY SSF46626 16 104 1.14E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0708 a47df34a554dad7bdb632cffa8c843e3 171 Pfam PF06892 Phage regulatory protein CII (CP76) 11 162 8.7E-44 T 14-10-2018 IPR009679 Bacteriophage 186, CII VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 PIRSF PIRSF000410 4 284 6.6E-97 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 1.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 1.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 1.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 PRINTS PR00996 Glutamate methyltransferase family signature 153 169 1.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 1.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 PRINTS PR00996 Glutamate methyltransferase family signature 43 56 1.2E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 Pfam PF03705 CheR methyltransferase, all-alpha domain 22 73 7.8E-14 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 281 1.5E-58 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 Gene3D G3DSA:3.40.50.150 86 284 1.4E-62 T 14-10-2018 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 SUPERFAMILY SSF47757 11 86 4.45E-19 T 14-10-2018 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 SUPERFAMILY SSF53335 87 283 8.25E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 SMART SM00138 21 284 5.6E-81 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VV2_1163 efe7436ed2a04a01a367dd44e8a90bc6 284 Gene3D G3DSA:1.10.155.10 9 85 3.0E-23 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.579 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 4.6E-13 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 SUPERFAMILY SSF53187 1 406 7.86E-80 T 14-10-2018 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 5.4E-155 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 PIRSF PIRSF037215 1 408 4.3E-182 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 Gene3D G3DSA:3.40.630.10 4 400 3.6E-175 T 14-10-2018 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 SUPERFAMILY SSF55031 209 320 5.58E-39 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 Pfam PF07687 Peptidase dimerisation domain 206 281 1.7E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 Gene3D G3DSA:3.30.70.360 209 319 3.6E-175 T 14-10-2018 VV2_0532 506c81f34bad7ea7bd0d2613336ba5d5 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VV2_0756 27bb63b5756398b95c057dc984454461 220 SUPERFAMILY SSF46785 3 84 8.5E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0756 27bb63b5756398b95c057dc984454461 220 Gene3D G3DSA:1.10.10.10 95 175 1.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0756 27bb63b5756398b95c057dc984454461 220 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.1E-65 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VV2_0756 27bb63b5756398b95c057dc984454461 220 Gene3D G3DSA:1.10.10.10 1 90 9.3E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0756 27bb63b5756398b95c057dc984454461 220 SUPERFAMILY SSF46785 90 174 4.62E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0756 27bb63b5756398b95c057dc984454461 220 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 214 35.182 T 14-10-2018 IPR007432 Protein of unknown function DUF480 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:1.20.58.100 431 547 1.6E-38 T 14-10-2018 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:3.50.50.60 9 416 2.5E-169 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.5E-274 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF46977 451 588 1.96E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:3.90.700.10 246 350 2.5E-169 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.5E-36 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 5.0E-240 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 Pfam PF00890 FAD binding domain 9 405 6.9E-118 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 SUPERFAMILY SSF51905 5 440 1.76E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 Gene3D G3DSA:4.10.80.40 548 588 2.4E-23 T 14-10-2018 VV1_0159 95d817a6f98a8de701cd265c811c29ed 588 PIRSF PIRSF000171 1 580 4.9E-49 T 14-10-2018 VV2_0196 d15d3ebe0303b816145c0b9ab6694188 195 Pfam PF13505 Outer membrane protein beta-barrel domain 9 195 8.2E-22 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV2_0196 d15d3ebe0303b816145c0b9ab6694188 195 SUPERFAMILY SSF56925 30 195 1.33E-28 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV2_0196 d15d3ebe0303b816145c0b9ab6694188 195 Gene3D G3DSA:2.40.160.20 29 195 6.3E-25 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 4.2E-131 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 5.1E-53 T 14-10-2018 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 SUPERFAMILY SSF118215 9 407 4.97E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV2_1383 3c85445a5d3e1d8d054c9a7ad5be2b99 434 Gene3D G3DSA:1.10.3860.10 1 425 8.4E-140 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV2_0111 b9e57d07401727db7f655deb315ad0af 316 SUPERFAMILY SSF81345 7 313 4.71E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV2_0111 b9e57d07401727db7f655deb315ad0af 316 Pfam PF01032 FecCD transport family 27 312 3.9E-54 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VV2_0111 b9e57d07401727db7f655deb315ad0af 316 Gene3D G3DSA:1.10.3470.10 6 315 1.7E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV1_2826 99f4080d232a60908e04b5a498f4561d 415 SUPERFAMILY SSF56796 1 380 5.5E-89 T 14-10-2018 VV1_2826 99f4080d232a60908e04b5a498f4561d 415 Gene3D G3DSA:1.20.1090.10 187 383 5.8E-41 T 14-10-2018 VV1_2826 99f4080d232a60908e04b5a498f4561d 415 Gene3D G3DSA:3.40.50.1970 1 180 1.1E-47 T 14-10-2018 VV1_2826 99f4080d232a60908e04b5a498f4561d 415 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 1.2E-91 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VV1_1101 dcf704bfd76efd875ee748f2d09b6dab 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 458 2.0E-106 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV1_1101 dcf704bfd76efd875ee748f2d09b6dab 458 PIRSF PIRSF002746 9 458 2.4E-145 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV1_1101 dcf704bfd76efd875ee748f2d09b6dab 458 Pfam PF02447 GntP family permease 13 457 2.1E-118 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 SUPERFAMILY SSF55785 354 472 1.52E-11 T 14-10-2018 IPR035965 PAS domain superfamily VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 Gene3D G3DSA:3.30.70.270 487 654 2.0E-17 T 14-10-2018 VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 617 6.6E-13 T 14-10-2018 IPR000160 GGDEF domain VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 Gene3D G3DSA:3.20.20.450 655 911 8.2E-86 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 SMART SM00052 653 903 3.4E-97 T 14-10-2018 IPR001633 EAL domain VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 Gene3D G3DSA:3.30.450.20 362 477 1.0E-13 T 14-10-2018 VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 SUPERFAMILY SSF141868 659 907 1.31E-80 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 SMART SM00267 475 638 2.0E-7 T 14-10-2018 IPR000160 GGDEF domain VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 Pfam PF00563 EAL domain 659 898 5.9E-70 T 14-10-2018 IPR001633 EAL domain VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 SUPERFAMILY SSF55073 492 633 6.75E-16 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 Pfam PF05228 CHASE4 domain 60 216 2.7E-27 T 14-10-2018 IPR007892 CHASE4 VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 480 1.0E-9 T 14-10-2018 IPR000014 PAS domain VV1_2281 3c93d05c26bbb820ad9ff7f88923713c 911 Pfam PF13426 PAS domain 374 474 9.6E-11 T 14-10-2018 IPR000014 PAS domain VV1_2838 0966c29540d884b0815b2b2842a514cd 227 Gene3D G3DSA:3.40.50.300 3 227 2.2E-57 T 14-10-2018 VV1_2838 0966c29540d884b0815b2b2842a514cd 227 SMART SM00382 34 222 4.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2838 0966c29540d884b0815b2b2842a514cd 227 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2838 0966c29540d884b0815b2b2842a514cd 227 SUPERFAMILY SSF52540 5 222 1.15E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2838 0966c29540d884b0815b2b2842a514cd 227 Pfam PF00005 ABC transporter 25 171 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 3.1E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 Gene3D G3DSA:3.40.50.2300 372 475 9.5E-36 T 14-10-2018 VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 5.6E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 Gene3D G3DSA:3.40.930.10 502 648 1.4E-50 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.0E-167 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 4.2E-19 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 SUPERFAMILY SSF55804 506 645 1.29E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV1_0638 5615dfe7e6a723e7d50588fe9e55928d 650 SUPERFAMILY SSF52794 385 471 5.23E-25 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV1_1839 14b117c88b6e0a076c38490ce7cbf031 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.3E-38 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain VV1_1839 14b117c88b6e0a076c38490ce7cbf031 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 143 3.7E-45 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain VV1_1839 14b117c88b6e0a076c38490ce7cbf031 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VV1_1839 14b117c88b6e0a076c38490ce7cbf031 231 SUPERFAMILY SSF118196 2 225 3.53E-77 T 14-10-2018 IPR036413 YaeB-like superfamily VV1_1839 14b117c88b6e0a076c38490ce7cbf031 231 Gene3D G3DSA:2.40.30.70 22 146 8.5E-45 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily VV1_1839 14b117c88b6e0a076c38490ce7cbf031 231 Gene3D G3DSA:3.30.2310.10 147 227 1.5E-17 T 14-10-2018 VV1_0485 3edabd61804272e5c8d5eaba10fc939b 241 Gene3D G3DSA:1.25.40.10 28 240 1.1E-52 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0485 3edabd61804272e5c8d5eaba10fc939b 241 SUPERFAMILY SSF48452 30 119 7.25E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0485 3edabd61804272e5c8d5eaba10fc939b 241 Pfam PF13525 Outer membrane lipoprotein 26 233 1.0E-79 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VV1_0485 3edabd61804272e5c8d5eaba10fc939b 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 8.3E-79 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VV1_0485 3edabd61804272e5c8d5eaba10fc939b 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.109 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD VV1_1556 78b0463e7081107316361cad78785c57 324 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 183 247 9.3E-24 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site VV1_1556 78b0463e7081107316361cad78785c57 324 Gene3D G3DSA:2.40.30.160 193 313 3.3E-33 T 14-10-2018 VV1_1556 78b0463e7081107316361cad78785c57 324 SUPERFAMILY SSF103025 17 237 2.67E-56 T 14-10-2018 VV1_1556 78b0463e7081107316361cad78785c57 324 SUPERFAMILY SSF101790 239 322 4.84E-18 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VV1_1556 78b0463e7081107316361cad78785c57 324 Gene3D G3DSA:3.30.70.1630 26 189 7.7E-42 T 14-10-2018 VV1_1556 78b0463e7081107316361cad78785c57 324 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 318 43.072 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VV1_1556 78b0463e7081107316361cad78785c57 324 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 153 3.8E-7 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VV1_1556 78b0463e7081107316361cad78785c57 324 Gene3D G3DSA:3.30.70.1400 29 115 7.7E-42 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1034 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 SUPERFAMILY SSF82693 565 674 1.78E-21 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 SUPERFAMILY SSF82866 808 1035 2.49E-43 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 SUPERFAMILY SSF82714 725 809 3.79E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 SUPERFAMILY SSF82866 299 500 2.35E-47 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 SUPERFAMILY SSF82693 136 332 1.01E-21 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 SUPERFAMILY SSF82693 39 132 8.89E-26 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 SUPERFAMILY SSF82714 184 273 5.36E-23 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 14-10-2018 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0529 8e3f45f4d6eb9617eec7b130aa1f6004 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.1E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VV2_0763 0ad46f5056d52b2b646aec03dfa7453d 350 SUPERFAMILY SSF56935 25 350 1.98E-32 T 14-10-2018 VV2_0763 0ad46f5056d52b2b646aec03dfa7453d 350 Gene3D G3DSA:2.40.160.10 109 350 6.6E-8 T 14-10-2018 IPR023614 Porin domain superfamily VV1_2532 cc436407d97c65754cf2e3713ed64ab4 161 SUPERFAMILY SSF50249 4 72 7.32E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2532 cc436407d97c65754cf2e3713ed64ab4 161 SMART SM00357 8 71 1.5E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV1_2532 cc436407d97c65754cf2e3713ed64ab4 161 Gene3D G3DSA:2.40.50.140 1 85 1.1E-16 T 14-10-2018 VV1_2532 cc436407d97c65754cf2e3713ed64ab4 161 ProSitePatterns PS00352 'Cold-shock' domain signature. 20 39 - T 14-10-2018 IPR019844 Cold-shock conserved site VV1_2532 cc436407d97c65754cf2e3713ed64ab4 161 Pfam PF05901 Excalibur calcium-binding domain 121 154 1.8E-9 T 14-10-2018 IPR008613 Excalibur calcium-binding domain VV1_2532 cc436407d97c65754cf2e3713ed64ab4 161 Pfam PF00313 'Cold-shock' DNA-binding domain 8 67 3.8E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 Gene3D G3DSA:2.130.10.10 120 327 6.6E-32 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 SUPERFAMILY SSF50998 28 318 7.69E-44 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 SMART SM00320 193 231 0.029 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 SMART SM00320 234 275 0.37 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 SMART SM00320 26 63 470.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 SMART SM00320 286 324 260.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 SMART SM00320 151 190 6.0E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 SMART SM00320 69 107 240.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 Gene3D G3DSA:2.130.10.10 24 119 1.2E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 177 191 - T 14-10-2018 IPR019775 WD40 repeat, conserved site VV1_1330 5426c8c6b578ffc77570598f2c4d84fe 327 Pfam PF13360 PQQ-like domain 172 287 3.7E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 Gene3D G3DSA:3.30.70.270 214 389 1.1E-21 T 14-10-2018 VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 SMART SM00267 218 388 1.4E-7 T 14-10-2018 IPR000160 GGDEF domain VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 Gene3D G3DSA:3.20.20.450 399 639 1.8E-36 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 Pfam PF00563 EAL domain 432 638 3.2E-45 T 14-10-2018 IPR001633 EAL domain VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 SUPERFAMILY SSF141868 430 638 1.7E-36 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 231 383 1.9E-19 T 14-10-2018 IPR000160 GGDEF domain VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 SUPERFAMILY SSF55073 235 388 1.18E-17 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 41 135 6.9E-28 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VV1_1432 504df66ce16e2c977d95aecd960e74ee 667 SMART SM00052 399 641 3.3E-16 T 14-10-2018 IPR001633 EAL domain VV1_2116 b56f83ceafe1b52c4e8deef4f176c1bc 234 SUPERFAMILY SSF55120 55 233 1.76E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_2116 b56f83ceafe1b52c4e8deef4f176c1bc 234 Gene3D G3DSA:3.30.70.1560 121 220 1.0E-39 T 14-10-2018 VV1_2116 b56f83ceafe1b52c4e8deef4f176c1bc 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 92 106 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_2116 b56f83ceafe1b52c4e8deef4f176c1bc 234 Pfam PF00849 RNA pseudouridylate synthase 57 201 4.9E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_2116 b56f83ceafe1b52c4e8deef4f176c1bc 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 61 231 1.2E-58 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_2116 b56f83ceafe1b52c4e8deef4f176c1bc 234 Gene3D G3DSA:3.30.70.580 45 120 8.8E-27 T 14-10-2018 VV1_0590 ee7368b33e80680356de19fcea64703a 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 8.4E-35 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VV1_0590 ee7368b33e80680356de19fcea64703a 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.849 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VV1_0590 ee7368b33e80680356de19fcea64703a 122 Gene3D G3DSA:3.40.1350.10 13 122 1.0E-30 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VV1_0590 ee7368b33e80680356de19fcea64703a 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 9.7E-27 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 VV1_0590 ee7368b33e80680356de19fcea64703a 122 SUPERFAMILY SSF52980 8 112 1.18E-20 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 Gene3D G3DSA:1.20.120.530 72 218 1.4E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 SUPERFAMILY SSF46785 2 78 1.16E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 SMART SM00895 78 208 5.2E-7 T 14-10-2018 IPR011711 GntR, C-terminal VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 SMART SM00345 10 68 1.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 Gene3D G3DSA:1.10.10.10 1 69 1.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 SUPERFAMILY SSF48008 74 215 4.97E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_0645 f6fc3c5ba41bc80e1903c0d265515e1f 220 Pfam PF07729 FCD domain 78 207 7.8E-14 T 14-10-2018 IPR011711 GntR, C-terminal VV1_2128 d1f9928125852b0d360570d7df80c114 82 Gene3D G3DSA:1.10.1900.30 9 76 4.5E-36 T 14-10-2018 IPR038191 YciN superfamily VV1_2128 d1f9928125852b0d360570d7df80c114 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 4.4E-42 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 VV1_1300 bc601cfc77b77aa3fcf0f5182e59e127 211 Pfam PF08238 Sel1 repeat 74 106 0.03 T 14-10-2018 IPR006597 Sel1-like repeat VV1_1300 bc601cfc77b77aa3fcf0f5182e59e127 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 14-10-2018 IPR006597 Sel1-like repeat VV1_1300 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 144 179 22.0 T 14-10-2018 IPR006597 Sel1-like repeat VV1_1300 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 108 143 2.9E-6 T 14-10-2018 IPR006597 Sel1-like repeat VV1_1300 bc601cfc77b77aa3fcf0f5182e59e127 211 SMART SM00671 72 107 0.0067 T 14-10-2018 IPR006597 Sel1-like repeat VV1_1300 bc601cfc77b77aa3fcf0f5182e59e127 211 Gene3D G3DSA:1.25.40.10 34 211 8.3E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1300 bc601cfc77b77aa3fcf0f5182e59e127 211 SUPERFAMILY SSF81901 64 186 9.29E-23 T 14-10-2018 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 PIRSF PIRSF006076 1 804 1.9E-245 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF01103 Surface antigen 448 804 2.2E-89 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 264 346 3.9E-14 T 14-10-2018 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 18 91 3.9E-20 T 14-10-2018 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 4.7E-279 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.4E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 176 263 2.5E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 92 172 3.5E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.2E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 175 263 2.3E-22 T 14-10-2018 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:2.40.160.50 425 804 1.6E-121 T 14-10-2018 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.771 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 347 424 6.6E-26 T 14-10-2018 VV1_1868 f9846c069a5ec572f2e3a297ca83b0b7 804 Gene3D G3DSA:3.10.20.310 92 174 1.4E-17 T 14-10-2018 VV1_0542 cf5fa6a009932b9a53602d9529847a13 125 Pfam PF01228 Glycine radical 15 106 1.4E-22 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 VV1_0542 cf5fa6a009932b9a53602d9529847a13 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VV1_0542 cf5fa6a009932b9a53602d9529847a13 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.06 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VV1_0542 cf5fa6a009932b9a53602d9529847a13 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 7.8E-69 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VV1_0542 cf5fa6a009932b9a53602d9529847a13 125 PIRSF PIRSF000378 2 125 5.9E-54 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VV1_0542 cf5fa6a009932b9a53602d9529847a13 125 SUPERFAMILY SSF51998 65 124 1.1E-23 T 14-10-2018 VV1_0542 cf5fa6a009932b9a53602d9529847a13 125 Gene3D G3DSA:3.20.70.20 49 125 1.6E-25 T 14-10-2018 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Pfam PF00563 EAL domain 599 834 1.1E-72 T 14-10-2018 IPR001633 EAL domain VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 SMART SM00052 592 839 2.8E-99 T 14-10-2018 IPR001633 EAL domain VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 SMART SM00267 418 582 1.6E-26 T 14-10-2018 IPR000160 GGDEF domain VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 SUPERFAMILY SSF158472 371 420 3.14E-8 T 14-10-2018 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Pfam PF02743 Cache domain 43 318 9.8E-19 T 14-10-2018 IPR033479 Double Cache domain 1 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 SUPERFAMILY SSF55073 434 575 4.32E-29 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 431 575 2.1E-27 T 14-10-2018 IPR000160 GGDEF domain VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Gene3D G3DSA:3.30.450.20 222 338 1.5E-18 T 14-10-2018 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Gene3D G3DSA:3.30.450.20 162 221 1.5E-18 T 14-10-2018 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Gene3D G3DSA:1.10.8.500 370 422 3.4E-7 T 14-10-2018 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 SMART SM00304 370 423 1.5E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Gene3D G3DSA:3.20.20.450 595 843 1.3E-89 T 14-10-2018 IPR035919 EAL domain superfamily VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 575 1.4E-21 T 14-10-2018 IPR000160 GGDEF domain VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 Gene3D G3DSA:3.30.70.270 424 594 6.1E-33 T 14-10-2018 VV1_0893 886a507c03afcaf8f66f9e44d98d5b0a 843 SUPERFAMILY SSF141868 600 841 4.18E-81 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0736 3030754be01b4091d8f0134967084711 378 Pfam PF01979 Amidohydrolase family 52 374 4.3E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VV2_0736 3030754be01b4091d8f0134967084711 378 Gene3D G3DSA:2.30.40.10 10 373 9.5E-103 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0736 3030754be01b4091d8f0134967084711 378 SUPERFAMILY SSF51556 56 345 2.82E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV2_0736 3030754be01b4091d8f0134967084711 378 SUPERFAMILY SSF51338 4 55 6.48E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0736 3030754be01b4091d8f0134967084711 378 PIRSF PIRSF038994 3 378 9.1E-92 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VV2_0736 3030754be01b4091d8f0134967084711 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 373 3.9E-86 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VV2_0736 3030754be01b4091d8f0134967084711 378 Gene3D G3DSA:3.20.20.140 57 342 9.5E-103 T 14-10-2018 VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 Gene3D G3DSA:1.10.10.10 125 232 2.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 SUPERFAMILY SSF46894 138 230 7.89E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 1.6E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 Gene3D G3DSA:3.40.50.2300 1 122 7.5E-30 T 14-10-2018 VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 SUPERFAMILY SSF52172 3 123 1.99E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 SMART SM00448 3 113 9.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 SMART SM00862 153 229 2.8E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_0779 765c58aa31fe4cd19e29b262af8eff84 233 Pfam PF00072 Response regulator receiver domain 5 113 3.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3174 9eee86f00f3b0506950e90673953e6b4 404 Pfam PF00155 Aminotransferase class I and II 61 391 1.3E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV1_3174 9eee86f00f3b0506950e90673953e6b4 404 SUPERFAMILY SSF53383 5 400 7.93E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_3174 9eee86f00f3b0506950e90673953e6b4 404 Gene3D G3DSA:3.40.640.10 53 294 7.7E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_3174 9eee86f00f3b0506950e90673953e6b4 404 Gene3D G3DSA:3.90.1150.10 21 398 7.7E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 PIRSF PIRSF000722 1 397 4.5E-150 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 Gene3D G3DSA:3.30.420.40 2 194 4.5E-76 T 14-10-2018 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.6E-174 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 Pfam PF00871 Acetokinase family 5 390 4.5E-169 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 SUPERFAMILY SSF53067 3 195 2.78E-66 T 14-10-2018 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 Gene3D G3DSA:3.30.420.40 195 397 9.7E-83 T 14-10-2018 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 SUPERFAMILY SSF53067 155 395 4.58E-86 T 14-10-2018 VV1_2221 a0e8637c77cd5188242631059fa62da6 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.208 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VV1_2308 28fc3e635a9042bb0190a719d1b6d1a7 332 Gene3D G3DSA:3.90.550.10 1 206 3.0E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2308 28fc3e635a9042bb0190a719d1b6d1a7 332 SUPERFAMILY SSF53448 3 216 1.94E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2308 28fc3e635a9042bb0190a719d1b6d1a7 332 Pfam PF00535 Glycosyl transferase family 2 8 145 1.1E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VV2_0993 ec822eba6cefc4b0de494e70ae600c7f 286 Gene3D G3DSA:3.40.190.290 92 284 3.2E-36 T 14-10-2018 VV2_0993 ec822eba6cefc4b0de494e70ae600c7f 286 Pfam PF03466 LysR substrate binding domain 89 285 1.4E-25 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0993 ec822eba6cefc4b0de494e70ae600c7f 286 Gene3D G3DSA:1.10.10.10 3 90 3.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0993 ec822eba6cefc4b0de494e70ae600c7f 286 SUPERFAMILY SSF46785 4 88 5.06E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0993 ec822eba6cefc4b0de494e70ae600c7f 286 SUPERFAMILY SSF53850 92 286 3.8E-28 T 14-10-2018 VV2_0993 ec822eba6cefc4b0de494e70ae600c7f 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 SUPERFAMILY SSF53850 92 307 9.59E-50 T 14-10-2018 VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 Pfam PF03466 LysR substrate binding domain 97 307 6.9E-31 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 SUPERFAMILY SSF46785 7 86 1.69E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 Gene3D G3DSA:3.40.190.10 94 304 2.7E-59 T 14-10-2018 VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 Gene3D G3DSA:3.40.190.10 182 280 2.7E-59 T 14-10-2018 VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 Gene3D G3DSA:1.10.10.10 2 88 3.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0957 147aa3ff809e3a44387eaae85533a97c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2964 f8dfbcbbdb064425e83c43a632e71488 535 Pfam PF03734 L,D-transpeptidase catalytic domain 308 472 9.3E-27 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VV1_2964 f8dfbcbbdb064425e83c43a632e71488 535 SUPERFAMILY SSF141523 306 467 1.83E-17 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VV1_2964 f8dfbcbbdb064425e83c43a632e71488 535 Pfam PF01471 Putative peptidoglycan binding domain 243 280 8.9E-10 T 14-10-2018 IPR002477 Peptidoglycan binding-like VV1_2964 f8dfbcbbdb064425e83c43a632e71488 535 SUPERFAMILY SSF47090 210 288 2.82E-14 T 14-10-2018 IPR036365 PGBD-like superfamily VV1_1434 e7a359a495bb41f49e2d7cf6cb201816 216 Pfam PF04612 Type II secretion system (T2SS), protein M 9 75 1.9E-8 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VV1_1055 801ebf06d3ec705bb866961d35a4cca0 186 SUPERFAMILY SSF55821 3 182 3.97E-58 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VV1_1055 801ebf06d3ec705bb866961d35a4cca0 186 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 2 184 39.798 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VV1_1055 801ebf06d3ec705bb866961d35a4cca0 186 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 186 1.6E-44 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VV1_1055 801ebf06d3ec705bb866961d35a4cca0 186 Gene3D G3DSA:3.90.870.10 2 184 5.2E-62 T 14-10-2018 VV1_1055 801ebf06d3ec705bb866961d35a4cca0 186 Pfam PF01300 Telomere recombination 11 186 2.0E-50 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VV1_1280 4dee94aa94e064c8c56a7492796a8fde 144 SMART SM00450 40 138 1.4E-21 T 14-10-2018 IPR001763 Rhodanese-like domain VV1_1280 4dee94aa94e064c8c56a7492796a8fde 144 Pfam PF00581 Rhodanese-like domain 42 135 1.7E-18 T 14-10-2018 IPR001763 Rhodanese-like domain VV1_1280 4dee94aa94e064c8c56a7492796a8fde 144 Gene3D G3DSA:3.40.250.10 22 144 1.9E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV1_1280 4dee94aa94e064c8c56a7492796a8fde 144 SUPERFAMILY SSF52821 16 141 8.51E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV1_2904 de535cd36f15b3e48fa7353f31954aba 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 6.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2904 de535cd36f15b3e48fa7353f31954aba 291 SUPERFAMILY SSF46785 3 84 2.45E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2904 de535cd36f15b3e48fa7353f31954aba 291 Gene3D G3DSA:3.40.190.290 93 287 1.6E-33 T 14-10-2018 VV1_2904 de535cd36f15b3e48fa7353f31954aba 291 Pfam PF03466 LysR substrate binding domain 92 257 2.0E-17 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_2904 de535cd36f15b3e48fa7353f31954aba 291 SUPERFAMILY SSF53850 92 290 1.09E-23 T 14-10-2018 VV1_2904 de535cd36f15b3e48fa7353f31954aba 291 Gene3D G3DSA:1.10.10.10 2 85 2.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1896 25cadafbd5774e7550ade1b824823813 815 Gene3D G3DSA:1.20.140.10 361 508 4.8E-98 T 14-10-2018 VV1_1896 25cadafbd5774e7550ade1b824823813 815 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.1E-113 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VV1_1896 25cadafbd5774e7550ade1b824823813 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 2.9E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV1_1896 25cadafbd5774e7550ade1b824823813 815 Gene3D G3DSA:2.40.110.10 237 360 4.8E-98 T 14-10-2018 VV1_1896 25cadafbd5774e7550ade1b824823813 815 Gene3D G3DSA:1.10.540.10 123 236 4.8E-98 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VV1_1896 25cadafbd5774e7550ade1b824823813 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 4.9E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VV1_1896 25cadafbd5774e7550ade1b824823813 815 SUPERFAMILY SSF47203 361 508 5.48E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VV1_1896 25cadafbd5774e7550ade1b824823813 815 SUPERFAMILY SSF56645 122 356 2.62E-42 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VV2_0755 f682992f974d3cc9e0d893a4ca29324f 98 SUPERFAMILY SSF82771 10 79 1.09E-11 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VV2_0755 f682992f974d3cc9e0d893a4ca29324f 98 Pfam PF01541 GIY-YIG catalytic domain 10 79 6.5E-13 T 14-10-2018 IPR000305 GIY-YIG endonuclease VV2_0755 f682992f974d3cc9e0d893a4ca29324f 98 Gene3D G3DSA:3.40.1440.10 6 96 4.0E-25 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VV2_0524 922a4e9ceb75bbc05bd9f6eaa58298e7 198 Gene3D G3DSA:3.30.1330.60 57 197 4.3E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0524 922a4e9ceb75bbc05bd9f6eaa58298e7 198 PRINTS PR01021 OMPA domain signature 139 155 5.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_0524 922a4e9ceb75bbc05bd9f6eaa58298e7 198 PRINTS PR01021 OMPA domain signature 124 139 5.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_0524 922a4e9ceb75bbc05bd9f6eaa58298e7 198 SUPERFAMILY SSF103088 81 194 1.83E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0524 922a4e9ceb75bbc05bd9f6eaa58298e7 198 ProSitePatterns PS01068 OmpA-like domain. 126 170 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VV2_0524 922a4e9ceb75bbc05bd9f6eaa58298e7 198 Pfam PF00691 OmpA family 94 188 7.0E-17 T 14-10-2018 IPR006665 OmpA-like domain VV2_0930 01ba2a01451d1d9b17d80c59a032292c 174 Pfam PF00174 Oxidoreductase molybdopterin binding domain 75 148 3.4E-6 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 VV2_0930 01ba2a01451d1d9b17d80c59a032292c 174 SUPERFAMILY SSF56524 40 173 1.44E-20 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 SUPERFAMILY SSF53067 154 340 4.66E-51 T 14-10-2018 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 Pfam PF06723 MreB/Mbl protein 11 338 1.6E-149 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 Gene3D G3DSA:3.30.420.40 14 331 3.6E-132 T 14-10-2018 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.4E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 Gene3D G3DSA:3.30.420.40 158 321 3.6E-132 T 14-10-2018 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 Gene3D G3DSA:3.90.640.10 190 263 3.6E-132 T 14-10-2018 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 SUPERFAMILY SSF53067 9 152 2.71E-37 T 14-10-2018 VV1_1449 3f46813e541448b0e3943ad6bdd9d964 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.8E-166 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VV2_0802 0d5fb6f1f1b339859a29b6b21ff70516 251 SUPERFAMILY SSF47413 7 69 8.91E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_0802 0d5fb6f1f1b339859a29b6b21ff70516 251 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 70 8.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 Gene3D G3DSA:4.10.450.10 38 198 1.5E-179 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 Gene3D G3DSA:3.30.410.40 151 471 1.5E-179 T 14-10-2018 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 Gene3D G3DSA:1.10.1220.110 97 150 1.5E-179 T 14-10-2018 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 Pfam PF05199 GMC oxidoreductase 388 526 1.5E-42 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 64.927 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 Pfam PF00732 GMC oxidoreductase 5 297 1.5E-91 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 PIRSF PIRSF000137 1 536 6.9E-148 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 SUPERFAMILY SSF54373 292 474 3.83E-63 T 14-10-2018 VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 SUPERFAMILY SSF51905 1 534 3.15E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 Gene3D G3DSA:3.50.50.60 4 530 1.5E-179 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1688 252305eb93a722ce6079f4e7bcd809b3 560 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 536 4.3E-239 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VV2_1409 8cef75de0cb83dcb118cc0ac5436f132 158 PIRSF PIRSF028777 15 152 5.0E-52 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 VV2_1409 8cef75de0cb83dcb118cc0ac5436f132 158 Pfam PF03733 Inner membrane component domain 90 140 1.2E-17 T 14-10-2018 IPR005185 Inner membrane component domain VV2_1409 8cef75de0cb83dcb118cc0ac5436f132 158 Pfam PF03733 Inner membrane component domain 18 67 8.4E-14 T 14-10-2018 IPR005185 Inner membrane component domain VV1_0533 293164651f39d6a6e1af7eee23318bff 239 Gene3D G3DSA:3.40.50.150 7 235 2.9E-56 T 14-10-2018 VV1_0533 293164651f39d6a6e1af7eee23318bff 239 Pfam PF05175 Methyltransferase small domain 42 135 6.5E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VV1_0533 293164651f39d6a6e1af7eee23318bff 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 52.462 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VV1_0533 293164651f39d6a6e1af7eee23318bff 239 SUPERFAMILY SSF53335 34 196 4.0E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0533 293164651f39d6a6e1af7eee23318bff 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 4.9E-6 T 14-10-2018 VV1_0533 293164651f39d6a6e1af7eee23318bff 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 4.9E-6 T 14-10-2018 VV1_0533 293164651f39d6a6e1af7eee23318bff 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 4.9E-6 T 14-10-2018 VV1_0533 293164651f39d6a6e1af7eee23318bff 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV2_0889 7e7f0d41d73c6297c0dce149bebdaf8e 529 Pfam PF08019 Domain of unknown function (DUF1705) 41 192 1.7E-51 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VV2_0889 7e7f0d41d73c6297c0dce149bebdaf8e 529 Pfam PF00884 Sulfatase 223 512 1.4E-47 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV2_0889 7e7f0d41d73c6297c0dce149bebdaf8e 529 SUPERFAMILY SSF53649 265 515 1.21E-17 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_0889 7e7f0d41d73c6297c0dce149bebdaf8e 529 Gene3D G3DSA:3.40.720.10 201 529 1.1E-84 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 Gene3D G3DSA:3.20.20.80 522 842 1.6E-76 T 14-10-2018 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 Gene3D G3DSA:2.60.40.10 335 427 2.9E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1833 f78a42254dcb45e89f242677e2c10569 846 Gene3D G3DSA:2.60.40.10 178 271 2.5E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1833 f78a42254dcb45e89f242677e2c10569 846 Gene3D G3DSA:2.60.40.10 84 173 4.5E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1833 f78a42254dcb45e89f242677e2c10569 846 Gene3D G3DSA:2.10.10.20 8 79 4.2E-10 T 14-10-2018 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 Pfam PF00704 Glycosyl hydrolases family 18 525 825 4.5E-26 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 SMART SM00636 523 825 2.2E-4 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 SUPERFAMILY SSF51055 19 78 8.63E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 Gene3D G3DSA:2.60.40.10 429 521 4.8E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1833 f78a42254dcb45e89f242677e2c10569 846 SMART SM00495 28 74 1.1E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 SMART SM00495 277 326 0.0034 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1833 f78a42254dcb45e89f242677e2c10569 846 SUPERFAMILY SSF51445 522 833 7.96E-49 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_0312 a376f4f10ab2ddeaea9c12de97a0422e 293 Pfam PF11060 Protein of unknown function (DUF2861) 23 289 2.1E-96 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 VV1_1855 383b15b18c5c2af09ee60f52ca1338cc 245 Gene3D G3DSA:3.30.2350.10 1 225 3.3E-59 T 14-10-2018 VV1_1855 383b15b18c5c2af09ee60f52ca1338cc 245 Pfam PF00849 RNA pseudouridylate synthase 11 170 2.8E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1855 383b15b18c5c2af09ee60f52ca1338cc 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_1855 383b15b18c5c2af09ee60f52ca1338cc 245 SUPERFAMILY SSF55120 2 237 1.76E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV2_0946 3e0b68bfbb43bdafd969f44e9e3b28ae 100 Hamap MF_00674 UPF0251 protein . 2 98 25.571 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VV2_0946 3e0b68bfbb43bdafd969f44e9e3b28ae 100 Gene3D G3DSA:1.10.10.10 32 83 1.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0946 3e0b68bfbb43bdafd969f44e9e3b28ae 100 Pfam PF02001 Protein of unknown function DUF134 3 88 3.9E-20 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SUPERFAMILY SSF50341 598 732 1.44E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Gene3D G3DSA:2.40.50.180 622 687 2.0E-34 T 14-10-2018 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SUPERFAMILY SSF47226 6 128 1.01E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SMART SM00073 6 103 1.4E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SMART SM00260 591 732 5.1E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Gene3D G3DSA:2.30.30.40 599 728 2.0E-34 T 14-10-2018 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Gene3D G3DSA:1.10.287.560 352 411 3.0E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 352 411 1.7E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SMART SM01231 351 411 2.2E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Gene3D G3DSA:1.20.120.160 2 143 6.9E-36 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Gene3D G3DSA:3.30.565.10 412 598 8.8E-57 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SUPERFAMILY SSF47384 353 412 5.1E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Pfam PF01584 CheW-like domain 605 734 4.4E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Pfam PF01627 Hpt domain 8 99 3.5E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SMART SM00387 456 599 1.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1955 b587f56124abeba478e85511eca4f9b5 741 SUPERFAMILY SSF55874 414 597 1.57E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1955 b587f56124abeba478e85511eca4f9b5 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 5.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 5.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 596 5.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 553 5.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1955 b587f56124abeba478e85511eca4f9b5 741 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 598 6.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 SUPERFAMILY SSF47384 335 371 1.55E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 366 1.3E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 SMART SM00387 528 641 3.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 639 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 SUPERFAMILY SSF55874 482 641 5.5E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 7.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 7.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 7.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 7.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.8E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 Gene3D G3DSA:2.60.120.10 157 318 1.2E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 Gene3D G3DSA:3.40.50.2300 3 142 9.3E-9 T 14-10-2018 VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 SUPERFAMILY SSF52172 3 130 7.63E-9 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 SUPERFAMILY SSF51206 201 311 9.3E-19 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_2815 06cd3df5959e540ba3c4ec70e648fc57 647 Gene3D G3DSA:3.30.565.10 488 646 2.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0737 cfb35c2928f81406c567ef4683af5262 206 SMART SM01390 3 95 6.4E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 SMART SM00363 96 160 8.9E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:1.10.1050.10 1 102 1.4E-44 T 14-10-2018 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.3 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 Gene3D G3DSA:3.10.290.10 103 191 1.1E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 SUPERFAMILY SSF55174 3 206 1.83E-72 T 14-10-2018 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.6E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VV1_0737 cfb35c2928f81406c567ef4683af5262 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.6E-85 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VV1_1652 0d54131f345949248781a1f05dd320ff 779 Pfam PF01103 Surface antigen 470 762 9.1E-5 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VV1_1652 0d54131f345949248781a1f05dd320ff 779 Pfam PF07244 Surface antigen variable number repeat 362 432 6.8E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VV1_1652 0d54131f345949248781a1f05dd320ff 779 Gene3D G3DSA:3.10.20.310 358 432 2.3E-7 T 14-10-2018 VV1_1652 0d54131f345949248781a1f05dd320ff 779 Gene3D G3DSA:3.40.1090.10 31 139 3.9E-29 T 14-10-2018 VV1_1652 0d54131f345949248781a1f05dd320ff 779 Gene3D G3DSA:3.40.1090.10 156 297 8.7E-19 T 14-10-2018 VV1_1652 0d54131f345949248781a1f05dd320ff 779 SUPERFAMILY SSF52151 45 334 7.06E-59 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VV1_1652 0d54131f345949248781a1f05dd320ff 779 Pfam PF01734 Patatin-like phospholipase 52 242 5.6E-30 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VV1_3007 d61276269551ad920eb1d5c444c9b2e6 58 Gene3D G3DSA:3.40.47.10 1 58 1.2E-13 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_3007 d61276269551ad920eb1d5c444c9b2e6 58 SUPERFAMILY SSF53901 1 57 2.3E-13 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_3154 6fec65dc64fc5871330a5162e00647f0 112 SUPERFAMILY SSF158757 15 91 6.8E-36 T 14-10-2018 IPR036810 SMc04008-like superfamily VV1_3154 6fec65dc64fc5871330a5162e00647f0 112 Pfam PF06844 Protein of unknown function (DUF1244) 42 108 3.4E-35 T 14-10-2018 IPR023163 SMc04008-like domain VV1_3154 6fec65dc64fc5871330a5162e00647f0 112 Gene3D G3DSA:1.10.3340.10 11 112 2.7E-45 T 14-10-2018 IPR036810 SMc04008-like superfamily VV2_0823 b184e76470753ff72534bb11030b3dfa 255 Gene3D G3DSA:3.40.190.10 30 248 7.6E-28 T 14-10-2018 VV2_0823 b184e76470753ff72534bb11030b3dfa 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 249 1.4E-23 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0823 b184e76470753ff72534bb11030b3dfa 255 SUPERFAMILY SSF53850 25 249 5.74E-37 T 14-10-2018 VV2_0823 b184e76470753ff72534bb11030b3dfa 255 Gene3D G3DSA:3.40.190.10 108 211 7.6E-28 T 14-10-2018 VV2_0823 b184e76470753ff72534bb11030b3dfa 255 SMART SM00062 24 252 3.3E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_0802 8945c105ff38f865d1c1123eaf100442 320 SUPERFAMILY SSF51735 3 175 6.43E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0802 8945c105ff38f865d1c1123eaf100442 320 Gene3D G3DSA:3.40.50.720 2 159 3.8E-16 T 14-10-2018 VV1_0802 8945c105ff38f865d1c1123eaf100442 320 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 128 8.7E-9 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VV2_0410 7fdea56de32ff6b7ff3625416adec19c 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_0410 7fdea56de32ff6b7ff3625416adec19c 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_0410 7fdea56de32ff6b7ff3625416adec19c 184 Gene3D G3DSA:3.30.700.10 7 162 8.7E-13 T 14-10-2018 VV2_0410 7fdea56de32ff6b7ff3625416adec19c 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_0410 7fdea56de32ff6b7ff3625416adec19c 184 SUPERFAMILY SSF54523 7 136 4.32E-16 T 14-10-2018 VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 SUPERFAMILY SSF54631 292 464 1.59E-21 T 14-10-2018 VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 Gene3D G3DSA:1.20.1080.10 4 270 5.6E-87 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 6.3E-75 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 Pfam PF01226 Formate/nitrite transporter 17 277 2.0E-70 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 Gene3D G3DSA:3.10.580.10 308 467 1.1E-21 T 14-10-2018 VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 9.5E-114 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 SMART SM00116 418 465 11.0 T 14-10-2018 IPR000644 CBS domain VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 SMART SM00116 320 368 0.017 T 14-10-2018 IPR000644 CBS domain VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 Pfam PF00571 CBS domain 313 364 6.8E-7 T 14-10-2018 IPR000644 CBS domain VV2_0232 e17fea75e27a67c0819a045d97f3c01c 483 Pfam PF00571 CBS domain 382 464 0.0013 T 14-10-2018 IPR000644 CBS domain VV1_3182 c52b9aa2c30a735849fd621c3d621075 68 Pfam PF13358 DDE superfamily endonuclease 1 68 1.7E-6 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VV1_3192 c52b9aa2c30a735849fd621c3d621075 68 Pfam PF13358 DDE superfamily endonuclease 1 68 1.7E-6 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VV2_1247 0f886dab655cd44ed420416f157ef762 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 40.736 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT VV2_1247 0f886dab655cd44ed420416f157ef762 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 1.8E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1247 0f886dab655cd44ed420416f157ef762 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1247 0f886dab655cd44ed420416f157ef762 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1247 0f886dab655cd44ed420416f157ef762 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1247 0f886dab655cd44ed420416f157ef762 902 Gene3D G3DSA:3.40.50.300 11 166 2.1E-6 T 14-10-2018 VV2_1247 0f886dab655cd44ed420416f157ef762 902 SUPERFAMILY SSF48452 442 805 3.8E-155 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1247 0f886dab655cd44ed420416f157ef762 902 Gene3D G3DSA:1.10.10.10 829 900 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1247 0f886dab655cd44ed420416f157ef762 902 Gene3D G3DSA:1.25.40.10 443 811 6.6E-83 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1247 0f886dab655cd44ed420416f157ef762 902 SMART SM00421 836 893 7.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1247 0f886dab655cd44ed420416f157ef762 902 SUPERFAMILY SSF52540 25 230 8.11E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1247 0f886dab655cd44ed420416f157ef762 902 SUPERFAMILY SSF46894 831 894 9.18E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1247 0f886dab655cd44ed420416f157ef762 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV1_2183 4656cb1455714b31ecbea76304d65083 285 PIRSF PIRSF015558 2 280 1.2E-75 T 14-10-2018 IPR016634 WYL domain protein, s026 type VV1_2183 4656cb1455714b31ecbea76304d65083 285 Pfam PF13280 WYL domain 130 211 1.4E-8 T 14-10-2018 IPR026881 WYL domain VV1_0414 244579bc7340c73e16e86fa4ab189e0a 417 Gene3D G3DSA:3.30.9.10 134 362 1.3E-54 T 14-10-2018 VV1_0414 244579bc7340c73e16e86fa4ab189e0a 417 Pfam PF01266 FAD dependent oxidoreductase 3 397 1.6E-71 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV1_0414 244579bc7340c73e16e86fa4ab189e0a 417 Gene3D G3DSA:3.50.50.60 93 405 1.3E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0414 244579bc7340c73e16e86fa4ab189e0a 417 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.965 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 VV1_0414 244579bc7340c73e16e86fa4ab189e0a 417 SUPERFAMILY SSF54373 270 360 1.7E-17 T 14-10-2018 VV1_0414 244579bc7340c73e16e86fa4ab189e0a 417 Gene3D G3DSA:3.50.50.60 1 78 1.9E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0414 244579bc7340c73e16e86fa4ab189e0a 417 SUPERFAMILY SSF51905 1 413 3.63E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0929 12a3f4b4f4c691f067598941ca7be41b 386 Gene3D G3DSA:2.40.420.20 308 372 2.2E-50 T 14-10-2018 VV2_0929 12a3f4b4f4c691f067598941ca7be41b 386 Gene3D G3DSA:2.40.30.170 61 307 2.2E-50 T 14-10-2018 VV2_0929 12a3f4b4f4c691f067598941ca7be41b 386 Gene3D G3DSA:1.10.287.470 107 181 2.2E-50 T 14-10-2018 VV2_0929 12a3f4b4f4c691f067598941ca7be41b 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 373 8.7E-38 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV2_0929 12a3f4b4f4c691f067598941ca7be41b 386 Gene3D G3DSA:2.40.50.100 70 215 2.2E-50 T 14-10-2018 VV2_0929 12a3f4b4f4c691f067598941ca7be41b 386 SUPERFAMILY SSF111369 62 283 1.44E-22 T 14-10-2018 VV2_0929 12a3f4b4f4c691f067598941ca7be41b 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 281 7.6E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_3215 43affbe1b0a6f361d733d8794ac6c8dc 374 SUPERFAMILY SSF53756 52 275 1.65E-10 T 14-10-2018 VV1_3215 43affbe1b0a6f361d733d8794ac6c8dc 374 Gene3D G3DSA:3.40.50.2000 23 192 1.5E-8 T 14-10-2018 VV1_3215 43affbe1b0a6f361d733d8794ac6c8dc 374 Gene3D G3DSA:3.40.50.2000 216 356 3.8E-5 T 14-10-2018 VV1_1208 1bd850a174b175b398a6292e3a004ade 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_1208 1bd850a174b175b398a6292e3a004ade 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.0E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VV1_1208 1bd850a174b175b398a6292e3a004ade 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 3.8E-53 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VV1_1208 1bd850a174b175b398a6292e3a004ade 233 Gene3D G3DSA:3.40.50.790 68 159 9.9E-82 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VV1_1208 1bd850a174b175b398a6292e3a004ade 233 PIRSF PIRSF002155 1 227 1.4E-79 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_1208 1bd850a174b175b398a6292e3a004ade 233 Gene3D G3DSA:3.30.190.20 21 225 9.9E-82 T 14-10-2018 VV1_1208 1bd850a174b175b398a6292e3a004ade 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.384 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VV1_1208 1bd850a174b175b398a6292e3a004ade 233 SUPERFAMILY SSF56808 6 225 3.01E-83 T 14-10-2018 IPR023674 Ribosomal protein L1-like VV1_1360 5ad0549498c33c85f1556063589da452 73 Pfam PF01197 Ribosomal protein L31 1 66 4.3E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1360 5ad0549498c33c85f1556063589da452 73 Gene3D G3DSA:2.30.170.50 1 71 6.8E-33 T 14-10-2018 VV1_1360 5ad0549498c33c85f1556063589da452 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1360 5ad0549498c33c85f1556063589da452 73 SUPERFAMILY SSF143800 1 68 2.24E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1360 5ad0549498c33c85f1556063589da452 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1360 5ad0549498c33c85f1556063589da452 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1360 5ad0549498c33c85f1556063589da452 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1360 5ad0549498c33c85f1556063589da452 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.955 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1360 5ad0549498c33c85f1556063589da452 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 6.9E-35 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1872 404e0f30c674fb984a49074da045fc65 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.3E-111 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VV1_1872 404e0f30c674fb984a49074da045fc65 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 5.9E-31 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VV1_1872 404e0f30c674fb984a49074da045fc65 262 Gene3D G3DSA:1.20.1180.10 197 262 2.5E-26 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VV1_1872 404e0f30c674fb984a49074da045fc65 262 SUPERFAMILY SSF51161 1 262 2.72E-84 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_1872 404e0f30c674fb984a49074da045fc65 262 PIRSF PIRSF000456 4 262 2.1E-110 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VV1_1872 404e0f30c674fb984a49074da045fc65 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV1_1872 404e0f30c674fb984a49074da045fc65 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.29 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VV1_1872 404e0f30c674fb984a49074da045fc65 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 32 4.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1872 404e0f30c674fb984a49074da045fc65 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1872 404e0f30c674fb984a49074da045fc65 262 Gene3D G3DSA:2.160.10.10 1 196 5.0E-55 T 14-10-2018 VV1_2627 752312ded7e9fc3109f10eb05576e0cd 149 Gene3D G3DSA:1.20.1270.380 1 89 6.9E-47 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily VV1_2627 752312ded7e9fc3109f10eb05576e0cd 149 Pfam PF06303 MatP N-terminal domain 2 85 3.6E-41 T 14-10-2018 IPR035087 MatP, N-terminal VV1_2627 752312ded7e9fc3109f10eb05576e0cd 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 4.2E-26 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VV1_2627 752312ded7e9fc3109f10eb05576e0cd 149 Gene3D G3DSA:1.10.1220.10 98 149 3.4E-24 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VV1_2627 752312ded7e9fc3109f10eb05576e0cd 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 123 3.0E-67 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VV1_2627 752312ded7e9fc3109f10eb05576e0cd 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.757 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VV2_1154 baa8069c043118c0cc34a476f0bee79a 348 SMART SM00220 11 282 5.4E-31 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV2_1154 baa8069c043118c0cc34a476f0bee79a 348 Gene3D G3DSA:3.30.200.20 8 95 1.9E-9 T 14-10-2018 VV2_1154 baa8069c043118c0cc34a476f0bee79a 348 Gene3D G3DSA:1.10.510.10 96 280 5.5E-38 T 14-10-2018 VV2_1154 baa8069c043118c0cc34a476f0bee79a 348 Pfam PF00069 Protein kinase domain 14 265 1.6E-40 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VV2_1154 baa8069c043118c0cc34a476f0bee79a 348 PIRSF PIRSF000654 35 281 4.6E-19 T 14-10-2018 VV2_1154 baa8069c043118c0cc34a476f0bee79a 348 SUPERFAMILY SSF56112 16 281 3.51E-56 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV2_1154 baa8069c043118c0cc34a476f0bee79a 348 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VV1_0941 ad8795152046d2885135efff882194c3 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.2E-38 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VV1_0941 ad8795152046d2885135efff882194c3 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 1.3E-62 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VV1_0941 ad8795152046d2885135efff882194c3 223 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.669 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VV1_2963 e051d92101dbd24ee5591c77d581c444 186 Gene3D G3DSA:3.30.1380.10 69 186 1.7E-11 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VV1_2963 e051d92101dbd24ee5591c77d581c444 186 SUPERFAMILY SSF55166 73 186 2.41E-34 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VV1_2963 e051d92101dbd24ee5591c77d581c444 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 38 186 3.7E-72 T 14-10-2018 IPR010275 Protein of unknown function DUF882 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 Hamap MF_01262 CCA-adding enzyme [cca]. 30 430 42.301 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 PIRSF PIRSF000813 30 436 3.9E-199 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 SUPERFAMILY SSF81301 23 148 3.71E-33 T 14-10-2018 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 SUPERFAMILY SSF81891 149 430 1.44E-52 T 14-10-2018 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 Gene3D G3DSA:1.10.3090.10 151 433 7.1E-44 T 14-10-2018 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 Pfam PF01743 Poly A polymerase head domain 32 151 1.1E-19 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 Pfam PF01966 HD domain 258 355 3.9E-6 T 14-10-2018 IPR006674 HD domain VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 Gene3D G3DSA:3.30.460.10 17 150 2.5E-30 T 14-10-2018 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 Hamap MF_01261 Multifunctional CCA protein [cca]. 30 436 53.956 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VV1_0622 c14b43f79e79e1000693328cc0f16ecd 436 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 178 241 1.4E-11 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VV1_1777 69046e4f89526be36f73396587591602 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.0E-29 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VV1_1777 69046e4f89526be36f73396587591602 110 SUPERFAMILY SSF50249 4 109 6.12E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1777 69046e4f89526be36f73396587591602 110 Gene3D G3DSA:2.40.50.140 1 110 7.3E-38 T 14-10-2018 VV1_1749 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1749 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1749 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1749 a44293c316947c8f72f08d68aea26327 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 1.2E-11 T 14-10-2018 IPR001775 GspD/PilQ family VV1_1749 a44293c316947c8f72f08d68aea26327 488 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 1.0E-39 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VV1_1749 a44293c316947c8f72f08d68aea26327 488 Pfam PF13629 Pilus formation protein N terminal region 26 95 7.9E-19 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VV2_0211 7b13ef8b836f40f17549f76460018ee6 382 Gene3D G3DSA:3.40.50.1970 1 180 1.9E-49 T 14-10-2018 VV2_0211 7b13ef8b836f40f17549f76460018ee6 382 SUPERFAMILY SSF56796 3 380 4.19E-99 T 14-10-2018 VV2_0211 7b13ef8b836f40f17549f76460018ee6 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 6.5E-83 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VV2_0211 7b13ef8b836f40f17549f76460018ee6 382 Gene3D G3DSA:1.20.1090.10 181 381 1.7E-37 T 14-10-2018 VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 Gene3D G3DSA:3.40.980.10 1 171 4.4E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 SUPERFAMILY SSF142433 251 385 8.63E-6 T 14-10-2018 IPR036653 CinA-like, C-terminal VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 SMART SM00852 4 171 1.5E-27 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 411 101.306 T 14-10-2018 IPR008135 Competence-induced protein CinA VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 353 1.0E-78 T 14-10-2018 IPR008135 Competence-induced protein CinA VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.6E-29 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 PIRSF PIRSF006728 1 391 8.8E-109 T 14-10-2018 IPR008135 Competence-induced protein CinA VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 166 5.5E-26 T 14-10-2018 IPR001453 MoaB/Mog domain VV1_3044 1fd8a202d2501eacc6490471c32a9c17 411 SUPERFAMILY SSF53218 2 204 8.38E-34 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily VV1_0019 291513ee541463de54e436d602b8bc25 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 53 72 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV1_0019 291513ee541463de54e436d602b8bc25 97 SMART SM00411 8 97 4.3E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_0019 291513ee541463de54e436d602b8bc25 97 SUPERFAMILY SSF47729 8 97 1.77E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_0019 291513ee541463de54e436d602b8bc25 97 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 9.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_0019 291513ee541463de54e436d602b8bc25 97 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 9.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_0019 291513ee541463de54e436d602b8bc25 97 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 9.0E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_0019 291513ee541463de54e436d602b8bc25 97 Gene3D G3DSA:4.10.520.10 8 97 7.1E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_0019 291513ee541463de54e436d602b8bc25 97 Pfam PF00216 Bacterial DNA-binding protein 8 97 3.1E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_0187 657942ca4afdcffb614685f51a6a8c32 336 Gene3D G3DSA:3.40.50.1400 25 335 6.4E-90 T 14-10-2018 VV1_0187 657942ca4afdcffb614685f51a6a8c32 336 Gene3D G3DSA:3.40.50.1400 180 318 6.4E-90 T 14-10-2018 VV1_0187 657942ca4afdcffb614685f51a6a8c32 336 Pfam PF00762 Ferrochelatase 23 335 9.0E-107 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VV1_0187 657942ca4afdcffb614685f51a6a8c32 336 TIGRFAM TIGR00109 hemH: ferrochelatase 21 335 8.3E-101 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VV1_0187 657942ca4afdcffb614685f51a6a8c32 336 ProSitePatterns PS00534 Ferrochelatase signature. 206 224 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VV1_0187 657942ca4afdcffb614685f51a6a8c32 336 Hamap MF_00323 Ferrochelatase [hemH]. 22 336 35.677 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VV1_0187 657942ca4afdcffb614685f51a6a8c32 336 SUPERFAMILY SSF53800 22 335 4.25E-98 T 14-10-2018 VV1_1725 d83c5a59deec9907dfe03c1a1902aa4b 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 8.7E-82 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VV1_1725 d83c5a59deec9907dfe03c1a1902aa4b 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.472 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VV1_1725 d83c5a59deec9907dfe03c1a1902aa4b 258 PIRSF PIRSF001357 5 252 4.2E-76 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VV1_1725 d83c5a59deec9907dfe03c1a1902aa4b 258 SUPERFAMILY SSF51569 6 245 6.07E-82 T 14-10-2018 VV1_1725 d83c5a59deec9907dfe03c1a1902aa4b 258 SMART SM01133 10 244 7.5E-77 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VV1_1725 d83c5a59deec9907dfe03c1a1902aa4b 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 9.3E-48 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VV1_1725 d83c5a59deec9907dfe03c1a1902aa4b 258 Gene3D G3DSA:3.20.20.70 1 256 6.2E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_3112 a2ecc41c6edd10d03f0e885e3f776d53 212 Pfam PF01914 MarC family integral membrane protein 8 208 5.3E-65 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV1_3112 a2ecc41c6edd10d03f0e885e3f776d53 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 4.6E-66 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV1_0665 443df3412b5b77a6eced4e016cdce4c7 269 SUPERFAMILY SSF56300 4 257 2.36E-53 T 14-10-2018 VV1_0665 443df3412b5b77a6eced4e016cdce4c7 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 47.946 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VV1_0665 443df3412b5b77a6eced4e016cdce4c7 269 Gene3D G3DSA:3.60.21.10 2 269 1.3E-74 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV1_0665 443df3412b5b77a6eced4e016cdce4c7 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 267 2.1E-118 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VV1_0665 443df3412b5b77a6eced4e016cdce4c7 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 163 4.3E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV1_0665 443df3412b5b77a6eced4e016cdce4c7 269 PIRSF PIRSF000903 1 269 3.6E-122 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VV2_1355 35f9cc147f9cd40467f3611c75d33133 299 SUPERFAMILY SSF103481 181 283 1.57E-9 T 14-10-2018 VV2_1355 35f9cc147f9cd40467f3611c75d33133 299 SUPERFAMILY SSF103481 42 132 4.05E-6 T 14-10-2018 VV2_1355 35f9cc147f9cd40467f3611c75d33133 299 Pfam PF00892 EamA-like transporter family 141 280 1.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1355 35f9cc147f9cd40467f3611c75d33133 299 Pfam PF00892 EamA-like transporter family 7 131 3.0E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 SUPERFAMILY SSF56601 11 282 3.59E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 262 1.4E-83 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.0E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 SMART SM00936 282 372 4.5E-30 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 9.2E-23 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 SUPERFAMILY SSF69189 282 374 6.67E-24 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Gene3D G3DSA:3.40.710.10 17 280 3.5E-88 T 14-10-2018 VV2_1681 e1ce6db2ae10c7d0fc62c649cb9d8a7b 391 Gene3D G3DSA:2.60.410.10 282 372 8.3E-28 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VV2_1395 b22c20bd00ecfff74f99d386beb82fb8 288 SUPERFAMILY SSF51197 8 283 1.65E-81 T 14-10-2018 VV2_1395 b22c20bd00ecfff74f99d386beb82fb8 288 Gene3D G3DSA:3.60.130.10 4 287 6.7E-82 T 14-10-2018 VV2_1395 b22c20bd00ecfff74f99d386beb82fb8 288 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 11 276 6.8E-58 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 VV1_0439 d41934a8a8c6bb4190ae891cc223c3c2 183 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 16 145 1.6E-46 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VV1_0439 d41934a8a8c6bb4190ae891cc223c3c2 183 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 64 82 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VV1_0439 d41934a8a8c6bb4190ae891cc223c3c2 183 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 16 149 2.9E-65 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VV1_0439 d41934a8a8c6bb4190ae891cc223c3c2 183 SUPERFAMILY SSF46785 17 148 1.68E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0439 d41934a8a8c6bb4190ae891cc223c3c2 183 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 16 183 53.435 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VV1_0439 d41934a8a8c6bb4190ae891cc223c3c2 183 Gene3D G3DSA:1.10.10.10 16 159 7.2E-54 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0439 d41934a8a8c6bb4190ae891cc223c3c2 183 Pfam PF02082 Transcriptional regulator 16 98 1.6E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VV2_0505 0630a75f614b0c2c774b986523ea83a5 322 Gene3D G3DSA:1.20.58.1130 9 205 1.2E-89 T 14-10-2018 VV2_0505 0630a75f614b0c2c774b986523ea83a5 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 313 6.7E-71 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 VV2_0505 0630a75f614b0c2c774b986523ea83a5 322 Pfam PF01699 Sodium/calcium exchanger protein 6 144 1.0E-22 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VV2_0505 0630a75f614b0c2c774b986523ea83a5 322 Pfam PF01699 Sodium/calcium exchanger protein 174 315 6.0E-32 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VV2_0505 0630a75f614b0c2c774b986523ea83a5 322 Gene3D G3DSA:1.20.1420.30 35 311 1.2E-89 T 14-10-2018 VV1_2967 3bf13fe9acbdf77ecb3b5985f6856f8f 459 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 19 459 2.6E-144 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VV1_2967 3bf13fe9acbdf77ecb3b5985f6856f8f 459 PIRSF PIRSF028099 7 459 1.3E-184 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VV1_2967 3bf13fe9acbdf77ecb3b5985f6856f8f 459 SUPERFAMILY SSF46626 318 459 4.22E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_2967 3bf13fe9acbdf77ecb3b5985f6856f8f 459 Gene3D G3DSA:1.10.760.10 312 459 3.5E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_1715 a761e31e221263306b0aeb7422cbb641 175 PIRSF PIRSF025550 1 174 8.6E-84 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VV1_1715 a761e31e221263306b0aeb7422cbb641 175 SUPERFAMILY SSF55718 44 139 8.24E-21 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV1_1715 a761e31e221263306b0aeb7422cbb641 175 Gene3D G3DSA:3.30.1050.10 27 139 3.2E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV1_1715 a761e31e221263306b0aeb7422cbb641 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 3.5E-19 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 Gene3D G3DSA:1.10.8.60 325 389 1.6E-17 T 14-10-2018 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 Gene3D G3DSA:3.40.50.2300 17 134 6.4E-29 T 14-10-2018 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 Pfam PF00158 Sigma-54 interaction domain 155 321 9.0E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 Pfam PF00072 Response regulator receiver domain 18 128 4.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 SMART SM00448 16 127 1.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 SMART SM00382 175 318 6.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 SUPERFAMILY SSF52540 154 384 3.99E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 SUPERFAMILY SSF52172 16 197 9.96E-37 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 Gene3D G3DSA:1.10.10.60 429 474 4.4E-12 T 14-10-2018 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 Pfam PF02954 Bacterial regulatory protein, Fis family 434 475 6.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 Gene3D G3DSA:3.40.50.300 140 324 4.9E-64 T 14-10-2018 VV1_2577 0d3d02e7abcd8d8569e3539e012cfbe7 484 SUPERFAMILY SSF46689 367 474 9.41E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 52.295 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 PIRSF PIRSF000525 2 364 3.7E-156 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 Pfam PF00266 Aminotransferase class-V 8 352 1.4E-65 T 14-10-2018 IPR000192 Aminotransferase class V domain VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 Gene3D G3DSA:3.40.640.10 21 261 9.9E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 Gene3D G3DSA:3.90.1150.10 262 364 4.6E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 362 5.3E-164 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 SUPERFAMILY SSF53383 8 362 3.37E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2813 28295fd252dbaffd73cd45528ba31f65 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VV2_1031 374bebaa177d2cf3da907130cb29e72f 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1031 374bebaa177d2cf3da907130cb29e72f 301 Gene3D G3DSA:1.10.10.10 1 85 3.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1031 374bebaa177d2cf3da907130cb29e72f 301 Gene3D G3DSA:3.40.190.10 87 291 6.9E-50 T 14-10-2018 VV2_1031 374bebaa177d2cf3da907130cb29e72f 301 SUPERFAMILY SSF53850 87 295 2.71E-40 T 14-10-2018 VV2_1031 374bebaa177d2cf3da907130cb29e72f 301 SUPERFAMILY SSF46785 1 77 1.93E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1031 374bebaa177d2cf3da907130cb29e72f 301 Gene3D G3DSA:3.40.190.10 170 268 6.9E-50 T 14-10-2018 VV2_1031 374bebaa177d2cf3da907130cb29e72f 301 Pfam PF03466 LysR substrate binding domain 93 296 1.1E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0040 ad8a57996d3c40b19ab067045dfb4efb 544 SUPERFAMILY SSF58104 235 544 3.27E-75 T 14-10-2018 VV1_0040 ad8a57996d3c40b19ab067045dfb4efb 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 507 8.2E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0040 ad8a57996d3c40b19ab067045dfb4efb 544 SMART SM00283 282 543 1.8E-81 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0040 ad8a57996d3c40b19ab067045dfb4efb 544 Pfam PF00672 HAMP domain 215 263 7.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0040 ad8a57996d3c40b19ab067045dfb4efb 544 Gene3D G3DSA:1.10.287.950 213 544 1.1E-72 T 14-10-2018 VV1_0040 ad8a57996d3c40b19ab067045dfb4efb 544 SMART SM00304 213 267 1.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1846 62b8e361d0060c285d1900cd71655a01 329 Gene3D G3DSA:3.40.47.10 2 329 8.9E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1846 62b8e361d0060c285d1900cd71655a01 329 SUPERFAMILY SSF53901 23 328 1.01E-30 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_1846 62b8e361d0060c285d1900cd71655a01 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 328 6.2E-17 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV1_1846 62b8e361d0060c285d1900cd71655a01 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 185 1.5E-15 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV1_0181 ccab63ea47db36a7b211305b01870705 404 Gene3D G3DSA:3.30.420.40 90 384 1.5E-93 T 14-10-2018 VV1_0181 ccab63ea47db36a7b211305b01870705 404 SUPERFAMILY SSF53067 85 391 1.35E-55 T 14-10-2018 VV1_0181 ccab63ea47db36a7b211305b01870705 404 SUPERFAMILY SSF46785 11 75 5.96E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0181 ccab63ea47db36a7b211305b01870705 404 Pfam PF00480 ROK family 86 390 2.7E-77 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_0181 ccab63ea47db36a7b211305b01870705 404 Gene3D G3DSA:3.30.420.40 207 376 1.5E-93 T 14-10-2018 VV1_0181 ccab63ea47db36a7b211305b01870705 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_0181 ccab63ea47db36a7b211305b01870705 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1077 b1bdb5fd4b46002eb71a09c9b0e5376b 364 Gene3D G3DSA:3.20.20.70 1 364 2.5E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1077 b1bdb5fd4b46002eb71a09c9b0e5376b 364 SUPERFAMILY SSF51395 1 362 3.36E-124 T 14-10-2018 VV2_1077 b1bdb5fd4b46002eb71a09c9b0e5376b 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 5.7E-98 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Gene3D G3DSA:2.40.50.920 27 103 2.0E-29 T 14-10-2018 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Pfam PF01434 Peptidase family M41 386 595 4.3E-81 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 SMART SM00382 188 327 3.6E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 6.7E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Gene3D G3DSA:1.20.58.760 406 608 4.4E-72 T 14-10-2018 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Gene3D G3DSA:3.40.50.300 140 326 9.9E-70 T 14-10-2018 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 SUPERFAMILY SSF52540 147 395 1.2E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 628 37.213 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 SUPERFAMILY SSF140990 406 601 4.97E-75 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Pfam PF06480 FtsH Extracellular 8 96 4.5E-12 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 1.0E-241 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VV1_1690 864958f0cd5c79704bf9cd42d1561882 653 Gene3D G3DSA:1.10.8.60 327 403 2.1E-27 T 14-10-2018 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 Pfam PF00543 Nitrogen regulatory protein P-II 12 113 1.4E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 SUPERFAMILY SSF54913 9 120 3.81E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV1_1658 e683b89fd3066931fcc1e428985e2500 120 ProSitePatterns PS00496 P-II protein uridylation site. 54 59 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 Gene3D G3DSA:3.30.70.120 2 120 1.3E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV1_1658 e683b89fd3066931fcc1e428985e2500 120 PIRSF PIRSF039144 9 120 2.7E-56 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 PRINTS PR00340 P-II protein signature 91 111 1.1E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 PRINTS PR00340 P-II protein signature 10 25 1.1E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 PRINTS PR00340 P-II protein signature 31 49 1.1E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 PRINTS PR00340 P-II protein signature 60 83 1.1E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 SMART SM00938 12 113 2.7E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VV1_1658 e683b89fd3066931fcc1e428985e2500 120 ProSitePatterns PS00638 P-II protein C-terminal region signature. 91 104 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VV1_1339 6491a1343856e55db46db705efaef596 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.3E-230 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1339 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF50465 298 393 3.17E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VV1_1339 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:3.40.50.300 1 203 2.4E-69 T 14-10-2018 VV1_1339 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:2.40.30.10 206 334 3.3E-52 T 14-10-2018 VV1_1339 6491a1343856e55db46db705efaef596 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 7.0E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF50447 205 301 5.11E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1339 6491a1343856e55db46db705efaef596 394 Gene3D G3DSA:2.40.30.10 338 393 5.9E-29 T 14-10-2018 VV1_1339 6491a1343856e55db46db705efaef596 394 SUPERFAMILY SSF52540 6 219 3.86E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1339 6491a1343856e55db46db705efaef596 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.4E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site VV1_1339 6491a1343856e55db46db705efaef596 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1339 6491a1343856e55db46db705efaef596 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.346 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VV1_1339 6491a1343856e55db46db705efaef596 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.5E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VV1_2092 3a2d9a5891306cbb6cb84aba006776d4 644 SMART SM00763 19 380 8.1E-217 T 14-10-2018 IPR013153 PrkA AAA domain VV1_2092 3a2d9a5891306cbb6cb84aba006776d4 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.5E-73 T 14-10-2018 IPR010650 PrkA C-terminal domain VV1_2092 3a2d9a5891306cbb6cb84aba006776d4 644 Pfam PF08298 PrkA AAA domain 19 380 4.2E-175 T 14-10-2018 IPR013153 PrkA AAA domain VV1_2092 3a2d9a5891306cbb6cb84aba006776d4 644 PIRSF PIRSF000549 1 644 8.9E-288 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VV1_2092 3a2d9a5891306cbb6cb84aba006776d4 644 SUPERFAMILY SSF52540 73 368 6.12E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2231 ed163dd4ac6c0ff1df808dfa900938d2 172 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 1.4E-43 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VV1_2231 ed163dd4ac6c0ff1df808dfa900938d2 172 SUPERFAMILY SSF158442 17 163 8.11E-44 T 14-10-2018 IPR023380 DsbB-like superfamily VV1_2231 ed163dd4ac6c0ff1df808dfa900938d2 172 Gene3D G3DSA:1.20.1550.10 3 172 7.5E-59 T 14-10-2018 IPR023380 DsbB-like superfamily VV1_2231 ed163dd4ac6c0ff1df808dfa900938d2 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.991 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB VV1_2095 cc3046027109f8b311c07d38279db41b 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VV1_2095 cc3046027109f8b311c07d38279db41b 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 3.4E-20 T 14-10-2018 VV1_2095 cc3046027109f8b311c07d38279db41b 246 Gene3D G3DSA:3.20.20.70 2 246 2.7E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2095 cc3046027109f8b311c07d38279db41b 246 PIRSF PIRSF000371 44 244 1.6E-44 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VV1_2095 cc3046027109f8b311c07d38279db41b 246 PIRSF PIRSF000371 2 47 1.0E-10 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VV1_2095 cc3046027109f8b311c07d38279db41b 246 SUPERFAMILY SSF102114 23 220 2.35E-29 T 14-10-2018 VV1_2095 cc3046027109f8b311c07d38279db41b 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.6E-107 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 VV1_2095 cc3046027109f8b311c07d38279db41b 246 Pfam PF04055 Radical SAM superfamily 24 178 7.4E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV2_0796 1c06da6151896b6ed58a314a9bbbc55f 299 SUPERFAMILY SSF53850 88 292 4.71E-43 T 14-10-2018 VV2_0796 1c06da6151896b6ed58a314a9bbbc55f 299 Gene3D G3DSA:3.40.190.290 90 292 3.2E-62 T 14-10-2018 VV2_0796 1c06da6151896b6ed58a314a9bbbc55f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0796 1c06da6151896b6ed58a314a9bbbc55f 299 Gene3D G3DSA:1.10.10.10 1 85 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0796 1c06da6151896b6ed58a314a9bbbc55f 299 Pfam PF03466 LysR substrate binding domain 88 291 4.3E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0796 1c06da6151896b6ed58a314a9bbbc55f 299 SUPERFAMILY SSF46785 1 87 3.16E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0994 d9135715955654069b03c95a46939efa 144 Pfam PF00011 Hsp20/alpha crystallin family 43 136 2.8E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VV1_0994 d9135715955654069b03c95a46939efa 144 Gene3D G3DSA:2.60.40.790 34 137 1.1E-22 T 14-10-2018 IPR008978 HSP20-like chaperone VV1_0994 d9135715955654069b03c95a46939efa 144 SUPERFAMILY SSF49764 6 137 1.01E-23 T 14-10-2018 IPR008978 HSP20-like chaperone VV1_1263 d8cf3918dbffe089c576f816629e4c72 340 Gene3D G3DSA:3.20.20.70 51 334 5.3E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1263 d8cf3918dbffe089c576f816629e4c72 340 Pfam PF13353 4Fe-4S single cluster domain 115 183 4.0E-7 T 14-10-2018 VV1_1263 d8cf3918dbffe089c576f816629e4c72 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 1.7E-123 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VV1_1263 d8cf3918dbffe089c576f816629e4c72 340 SUPERFAMILY SSF102114 102 322 5.76E-25 T 14-10-2018 VV1_1263 d8cf3918dbffe089c576f816629e4c72 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 3.3E-155 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like VV1_1263 d8cf3918dbffe089c576f816629e4c72 340 PIRSF PIRSF004911 3 340 1.3E-115 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VV1_1263 d8cf3918dbffe089c576f816629e4c72 340 Pfam PF04055 Radical SAM superfamily 117 232 1.9E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV2_1521 38be0ab74a259ba662984844f994b13c 367 SUPERFAMILY SSF82689 252 351 6.8E-22 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VV2_1521 38be0ab74a259ba662984844f994b13c 367 SUPERFAMILY SSF82861 100 179 2.09E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VV2_1521 38be0ab74a259ba662984844f994b13c 367 Gene3D G3DSA:3.30.70.100 249 346 1.5E-17 T 14-10-2018 VV2_1521 38be0ab74a259ba662984844f994b13c 367 SUPERFAMILY SSF50182 180 247 3.6E-18 T 14-10-2018 IPR010920 LSM domain superfamily VV2_1521 38be0ab74a259ba662984844f994b13c 367 Pfam PF00924 Mechanosensitive ion channel 138 342 8.2E-57 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV2_1521 38be0ab74a259ba662984844f994b13c 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VV2_1521 38be0ab74a259ba662984844f994b13c 367 Gene3D G3DSA:2.30.30.60 196 248 2.7E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VV1_1472 7a8f8ba318bef49770a331808d677166 390 Pfam PF05987 Bacterial protein of unknown function (DUF898) 8 382 1.1E-95 T 14-10-2018 IPR010295 Protein of unknown function DUF898 VV1_1515 5b087b70b862f70323471c8e7225b916 350 SUPERFAMILY SSF55811 218 345 4.05E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_1515 5b087b70b862f70323471c8e7225b916 350 SMART SM00478 37 188 8.8E-46 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VV1_1515 5b087b70b862f70323471c8e7225b916 350 Gene3D G3DSA:1.10.1670.10 7 209 1.9E-87 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VV1_1515 5b087b70b862f70323471c8e7225b916 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 3.2E-21 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VV1_1515 5b087b70b862f70323471c8e7225b916 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 6.7E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VV1_1515 5b087b70b862f70323471c8e7225b916 350 Gene3D G3DSA:3.90.79.10 220 348 1.8E-13 T 14-10-2018 VV1_1515 5b087b70b862f70323471c8e7225b916 350 SMART SM00525 189 209 1.5E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VV1_1515 5b087b70b862f70323471c8e7225b916 350 Gene3D G3DSA:1.10.340.30 19 130 1.9E-87 T 14-10-2018 VV1_1515 5b087b70b862f70323471c8e7225b916 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 269 3.2E-125 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VV1_1515 5b087b70b862f70323471c8e7225b916 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VV1_1515 5b087b70b862f70323471c8e7225b916 350 Pfam PF14815 NUDIX domain 232 343 2.1E-22 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VV1_1515 5b087b70b862f70323471c8e7225b916 350 SUPERFAMILY SSF48150 3 223 9.89E-75 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.1E-124 T 14-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 SUPERFAMILY SSF51735 3 240 1.64E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.3E-57 T 14-10-2018 VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 Gene3D G3DSA:3.40.50.720 3 240 7.3E-73 T 14-10-2018 VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0060 278611f15c3eaa41853f68d1d74f6844 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0221 ad1853d44f771cecffbab33092c0afa0 591 Pfam PF13487 HD domain 458 520 4.7E-13 T 14-10-2018 VV2_0221 ad1853d44f771cecffbab33092c0afa0 591 SUPERFAMILY SSF109604 399 570 6.6E-35 T 14-10-2018 VV2_0221 ad1853d44f771cecffbab33092c0afa0 591 SMART SM00471 403 540 1.6E-4 T 14-10-2018 IPR003607 HD/PDEase domain VV2_0221 ad1853d44f771cecffbab33092c0afa0 591 Gene3D G3DSA:1.10.3210.10 384 584 2.9E-67 T 14-10-2018 VV1_1629 86b4cf2552052ae117a02d49760c8862 255 SMART SM00895 99 227 3.7E-18 T 14-10-2018 IPR011711 GntR, C-terminal VV1_1629 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_1629 86b4cf2552052ae117a02d49760c8862 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_1629 86b4cf2552052ae117a02d49760c8862 255 Pfam PF07729 FCD domain 99 226 2.4E-17 T 14-10-2018 IPR011711 GntR, C-terminal VV1_1629 86b4cf2552052ae117a02d49760c8862 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.5E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_1629 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.20.120.530 97 236 6.8E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_1629 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF48008 98 235 1.15E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VV1_1629 86b4cf2552052ae117a02d49760c8862 255 Gene3D G3DSA:1.10.10.10 1 74 4.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1629 86b4cf2552052ae117a02d49760c8862 255 SMART SM00345 15 74 1.3E-27 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_1629 86b4cf2552052ae117a02d49760c8862 255 SUPERFAMILY SSF46785 5 76 2.73E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2999 ab786f3da050e2288c879e9dabb1edcc 476 SUPERFAMILY SSF55604 399 472 8.37E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV1_2999 ab786f3da050e2288c879e9dabb1edcc 476 Gene3D G3DSA:3.30.1360.60 394 475 7.7E-29 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV1_2999 ab786f3da050e2288c879e9dabb1edcc 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.5E-74 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV1_2999 ab786f3da050e2288c879e9dabb1edcc 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.1E-196 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VV1_2999 ab786f3da050e2288c879e9dabb1edcc 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV1_2999 ab786f3da050e2288c879e9dabb1edcc 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV1_2999 ab786f3da050e2288c879e9dabb1edcc 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 458 2.6E-20 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 SUPERFAMILY SSF52540 77 363 1.31E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 SMART SM00490 261 342 3.3E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 Gene3D G3DSA:3.40.50.300 1 214 7.2E-84 T 14-10-2018 VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 Pfam PF00270 DEAD/DEAH box helicase 27 198 1.4E-57 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 SMART SM00487 22 225 1.9E-67 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 Gene3D G3DSA:3.40.50.300 216 416 1.8E-47 T 14-10-2018 VV2_0227 24a7b8c00586df1d0d9ef1a122eda91e 418 Pfam PF00271 Helicase conserved C-terminal domain 237 342 3.6E-27 T 14-10-2018 IPR001650 Helicase, C-terminal VV2_0373 3afc2ac21cf4a0aaa7aa9ab8efa42f89 944 Gene3D G3DSA:2.40.160.50 629 943 1.4E-9 T 14-10-2018 VV2_0373 3afc2ac21cf4a0aaa7aa9ab8efa42f89 944 SUPERFAMILY SSF82171 353 571 2.49E-20 T 14-10-2018 VV2_0373 3afc2ac21cf4a0aaa7aa9ab8efa42f89 944 Gene3D G3DSA:2.120.10.30 381 602 1.1E-19 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VV2_0570 fc039c600308b36f110960676f881ad5 140 Pfam PF13673 Acetyltransferase (GNAT) domain 40 122 2.0E-11 T 14-10-2018 IPR000182 GNAT domain VV2_0570 fc039c600308b36f110960676f881ad5 140 Gene3D G3DSA:3.40.630.30 36 139 3.4E-25 T 14-10-2018 VV2_0570 fc039c600308b36f110960676f881ad5 140 SUPERFAMILY SSF55729 33 139 1.13E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0091 5bcc59b5e08956fad6c88be645d7a65e 292 Pfam PF00482 Type II secretion system (T2SS), protein F 154 281 3.2E-15 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_3032 1fff55bcf3a0c3d4d89beb307a1623b8 318 Gene3D G3DSA:1.20.1630.10 7 227 1.1E-14 T 14-10-2018 VV1_3032 1fff55bcf3a0c3d4d89beb307a1623b8 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 318 2.4E-149 T 14-10-2018 IPR017566 NrfD VV1_3032 1fff55bcf3a0c3d4d89beb307a1623b8 318 Pfam PF03916 Polysulphide reductase, NrfD 6 317 3.9E-75 T 14-10-2018 IPR005614 NrfD family VV2_1643 b5674de3f8e1a3dac10466adc3e5339e 203 SUPERFAMILY SSF51197 13 198 9.06E-69 T 14-10-2018 VV2_1643 b5674de3f8e1a3dac10466adc3e5339e 203 Gene3D G3DSA:2.60.120.590 14 201 9.0E-70 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily VV2_1643 b5674de3f8e1a3dac10466adc3e5339e 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 196 7.6E-32 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like VV2_0096 93cb6ee9cc947dd3c6c41b2a1aa4045b 188 Gene3D G3DSA:3.30.1330.60 60 186 1.1E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0096 93cb6ee9cc947dd3c6c41b2a1aa4045b 188 PRINTS PR01021 OMPA domain signature 117 132 4.3E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_0096 93cb6ee9cc947dd3c6c41b2a1aa4045b 188 PRINTS PR01021 OMPA domain signature 132 148 4.3E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_0096 93cb6ee9cc947dd3c6c41b2a1aa4045b 188 SUPERFAMILY SSF103088 87 187 2.62E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0096 93cb6ee9cc947dd3c6c41b2a1aa4045b 188 Pfam PF00691 OmpA family 89 181 3.8E-19 T 14-10-2018 IPR006665 OmpA-like domain VV2_0789 2e90a0aa73fbab1cb82ac0ed38595f77 425 Gene3D G3DSA:3.20.20.140 55 362 7.3E-178 T 14-10-2018 VV2_0789 2e90a0aa73fbab1cb82ac0ed38595f77 425 Gene3D G3DSA:2.30.40.10 8 409 7.3E-178 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0789 2e90a0aa73fbab1cb82ac0ed38595f77 425 SUPERFAMILY SSF51338 1 76 3.02E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV2_0789 2e90a0aa73fbab1cb82ac0ed38595f77 425 Pfam PF07969 Amidohydrolase family 42 403 5.5E-54 T 14-10-2018 IPR013108 Amidohydrolase 3 VV2_0789 2e90a0aa73fbab1cb82ac0ed38595f77 425 SUPERFAMILY SSF51556 54 372 1.19E-105 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_2360 407d82f6eb1505c0b3d34849d5862eb5 202 SUPERFAMILY SSF52317 13 200 1.18E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_2360 407d82f6eb1505c0b3d34849d5862eb5 202 Gene3D G3DSA:3.40.50.880 4 202 7.4E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_2360 407d82f6eb1505c0b3d34849d5862eb5 202 Pfam PF01965 DJ-1/PfpI family 15 181 2.5E-22 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VV2_0885 4994a5afa361e28456346e7b1e764c46 674 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 176 195 - T 14-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 VV2_0885 4994a5afa361e28456346e7b1e764c46 674 Gene3D G3DSA:1.25.40.880 396 536 2.1E-35 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VV2_0885 4994a5afa361e28456346e7b1e764c46 674 Pfam PF14864 Alkyl sulfatase C-terminal 544 667 2.0E-25 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal VV2_0885 4994a5afa361e28456346e7b1e764c46 674 SUPERFAMILY SSF55718 545 668 2.33E-26 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV2_0885 4994a5afa361e28456346e7b1e764c46 674 SMART SM00849 128 355 4.1E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0885 4994a5afa361e28456346e7b1e764c46 674 SUPERFAMILY SSF56281 30 537 6.67E-109 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_0885 4994a5afa361e28456346e7b1e764c46 674 Gene3D G3DSA:3.30.1050.10 538 671 8.1E-29 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV2_0885 4994a5afa361e28456346e7b1e764c46 674 Pfam PF00753 Metallo-beta-lactamase superfamily 124 341 8.2E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0885 4994a5afa361e28456346e7b1e764c46 674 Gene3D G3DSA:3.60.15.30 30 395 1.0E-118 T 14-10-2018 VV2_0885 4994a5afa361e28456346e7b1e764c46 674 Pfam PF14863 Alkyl sulfatase dimerisation 397 536 4.5E-37 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 SUPERFAMILY SSF50800 4 264 3.82E-16 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 SUPERFAMILY SSF63380 279 381 6.35E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Pfam PF03473 MOSC domain 139 262 1.7E-29 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 528 597 8.4E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Pfam PF00970 Oxidoreductase FAD-binding domain 283 378 7.7E-15 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Gene3D G3DSA:3.10.20.30 507 605 3.1E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 3.6E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 3.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 3.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 3.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 3.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 425 436 3.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 SUPERFAMILY SSF141673 6 133 7.59E-30 T 14-10-2018 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Gene3D G3DSA:2.40.30.10 278 378 3.7E-26 T 14-10-2018 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 SUPERFAMILY SSF52343 368 508 7.73E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Pfam PF03476 MOSC N-terminal beta barrel domain 4 117 1.6E-30 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 1.2E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 1.2E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 1.2E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 1.2E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 1.2E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 SUPERFAMILY SSF54292 501 603 2.88E-28 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV2_1598 63124749c61a2e824c44a43c5ebebd79 606 Gene3D G3DSA:3.40.50.80 380 506 2.1E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_0700 62b4bcc7f103e957c5cedf321374a801 185 Gene3D G3DSA:1.10.60.30 28 102 1.6E-28 T 14-10-2018 VV1_0700 62b4bcc7f103e957c5cedf321374a801 185 SUPERFAMILY SSF158710 28 170 1.57E-53 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily VV1_0700 62b4bcc7f103e957c5cedf321374a801 185 Gene3D G3DSA:1.10.60.30 104 175 8.0E-25 T 14-10-2018 VV1_0700 62b4bcc7f103e957c5cedf321374a801 185 PIRSF PIRSF016183 1 175 4.5E-74 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VV1_0700 62b4bcc7f103e957c5cedf321374a801 185 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 24.003 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VV1_0700 62b4bcc7f103e957c5cedf321374a801 185 Pfam PF04751 Protein of unknown function (DUF615) 19 168 5.0E-58 T 14-10-2018 IPR006839 Ribosome-associated, YjgA VV2_0158 585bfac5de40bb85b875814948252954 579 SUPERFAMILY SSF53300 103 272 6.45E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0158 585bfac5de40bb85b875814948252954 579 Gene3D G3DSA:3.40.50.410 101 284 8.2E-23 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0158 585bfac5de40bb85b875814948252954 579 Pfam PF13519 von Willebrand factor type A domain 106 211 5.8E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A VV1_0699 a5f2637e76405741ceccf7958e848e65 447 SUPERFAMILY SSF111283 12 447 1.7E-128 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VV1_0699 a5f2637e76405741ceccf7958e848e65 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.3E-62 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VV1_0699 a5f2637e76405741ceccf7958e848e65 447 Gene3D G3DSA:3.30.2290.10 2 233 8.1E-84 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VV2_0902 c2253c89369d5c74e87eb3025ffb3ae2 129 Gene3D G3DSA:3.30.310.70 1 127 1.5E-46 T 14-10-2018 IPR035923 TT1751-like domain superfamily VV2_0902 c2253c89369d5c74e87eb3025ffb3ae2 129 Pfam PF03625 Domain of unknown function DUF302 34 97 3.7E-27 T 14-10-2018 IPR005180 Domain of unknown function DUF302 VV2_0902 c2253c89369d5c74e87eb3025ffb3ae2 129 SUPERFAMILY SSF103247 1 126 2.35E-36 T 14-10-2018 IPR035923 TT1751-like domain superfamily VV2_0902 c2253c89369d5c74e87eb3025ffb3ae2 129 PIRSF PIRSF021774 1 129 2.1E-46 T 14-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 VV1_1569 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.315 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VV1_1569 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 2.0E-42 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VV1_1569 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 1.1E-33 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VV1_1569 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 SUPERFAMILY SSF56214 3 125 1.83E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VV1_1569 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 88 2.0E-40 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VV1_1569 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 6.8E-23 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VV1_1569 4eb351af8aa8ac1ea4c80f5cfca09ad7 126 Gene3D G3DSA:3.90.470.20 1 126 1.3E-40 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VV2_1020 92d6f47cf7968c981d3f41ed1726d551 294 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 38 294 4.9E-90 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 VV2_0906 9e9ca5bc8b2667eabfbf242155046631 304 SUPERFAMILY SSF103481 55 155 3.53E-14 T 14-10-2018 VV2_0906 9e9ca5bc8b2667eabfbf242155046631 304 SUPERFAMILY SSF103481 192 291 4.45E-13 T 14-10-2018 VV2_0906 9e9ca5bc8b2667eabfbf242155046631 304 Pfam PF00892 EamA-like transporter family 21 151 1.9E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0906 9e9ca5bc8b2667eabfbf242155046631 304 Pfam PF00892 EamA-like transporter family 157 282 7.1E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0391 d5f50b3acd399513324cf78a82e44049 418 SUPERFAMILY SSF56672 1 236 2.13E-64 T 14-10-2018 VV1_0391 d5f50b3acd399513324cf78a82e44049 418 Gene3D G3DSA:1.10.150.20 170 229 5.7E-8 T 14-10-2018 VV1_0391 d5f50b3acd399513324cf78a82e44049 418 Gene3D G3DSA:2.30.40.20 10 73 1.8E-36 T 14-10-2018 VV1_0391 d5f50b3acd399513324cf78a82e44049 418 Pfam PF00817 impB/mucB/samB family 5 151 2.6E-30 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VV1_0391 d5f50b3acd399513324cf78a82e44049 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 351 1.3E-5 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VV1_0391 d5f50b3acd399513324cf78a82e44049 418 Pfam PF13438 Domain of unknown function (DUF4113) 366 416 1.4E-22 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 VV1_0391 d5f50b3acd399513324cf78a82e44049 418 Gene3D G3DSA:3.30.70.270 4 156 1.8E-36 T 14-10-2018 VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 Gene3D G3DSA:1.10.287.130 145 288 1.0E-8 T 14-10-2018 VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 Gene3D G3DSA:3.30.565.10 291 440 1.0E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 Pfam PF00027 Cyclic nucleotide-binding domain 22 100 1.1E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 Gene3D G3DSA:2.60.120.10 3 136 1.5E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 SUPERFAMILY SSF55874 291 438 5.76E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 SMART SM00387 329 440 4.8E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 SMART SM00100 2 124 0.002 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 SUPERFAMILY SSF51206 3 133 4.71E-15 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 439 5.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 3.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 3.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 3.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2275 cf63e44c07443f30e5d23eef1ae9ef8a 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 3.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_0821 dc07557cf886cc5438bd24f9ff5203d8 725 Gene3D G3DSA:3.20.20.450 459 716 1.9E-71 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0821 dc07557cf886cc5438bd24f9ff5203d8 725 Pfam PF00563 EAL domain 475 709 1.4E-57 T 14-10-2018 IPR001633 EAL domain VV2_0821 dc07557cf886cc5438bd24f9ff5203d8 725 SUPERFAMILY SSF141868 474 717 1.96E-66 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0821 dc07557cf886cc5438bd24f9ff5203d8 725 SMART SM00052 466 714 3.5E-63 T 14-10-2018 IPR001633 EAL domain VV1_3014 349e526e7e81aee5934d29bbb001f577 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 4.9E-16 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VV2_1106 dca29ca2abf5d1572d2df74bf5d505bf 479 SUPERFAMILY SSF53649 1 466 1.6E-96 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_1106 dca29ca2abf5d1572d2df74bf5d505bf 479 Pfam PF16347 Domain of unknown function (DUF4976) 368 466 2.8E-9 T 14-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 VV2_1106 dca29ca2abf5d1572d2df74bf5d505bf 479 ProSitePatterns PS00523 Sulfatases signature 1. 40 52 - T 14-10-2018 IPR024607 Sulfatase, conserved site VV2_1106 dca29ca2abf5d1572d2df74bf5d505bf 479 Gene3D G3DSA:3.40.720.10 1 477 2.9E-103 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV2_1106 dca29ca2abf5d1572d2df74bf5d505bf 479 Pfam PF00884 Sulfatase 1 363 2.8E-37 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Gene3D G3DSA:3.90.226.10 1 309 3.3E-97 T 14-10-2018 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 214 2.3E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 SUPERFAMILY SSF48179 610 704 2.55E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 4.2E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 7.4E-24 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 SUPERFAMILY SSF51735 313 491 3.1E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Gene3D G3DSA:3.40.50.720 312 496 8.8E-59 T 14-10-2018 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Gene3D G3DSA:1.10.1040.50 497 698 9.7E-71 T 14-10-2018 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 54.109 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 SUPERFAMILY SSF48179 494 593 2.64E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 491 7.2E-55 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_1976 c6988fbda61bd4154aef6211b0bd3775 705 SUPERFAMILY SSF52096 3 302 8.81E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_0128 118bc1fd61933b6e57aad7216bba444f 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 2.5E-72 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VV1_0128 118bc1fd61933b6e57aad7216bba444f 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 4.8E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VV1_0128 118bc1fd61933b6e57aad7216bba444f 399 Pfam PF07670 Nucleoside recognition 87 182 2.6E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV1_0128 118bc1fd61933b6e57aad7216bba444f 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 395 6.9E-137 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VV1_1088 e3a548de1528fbf22ed160d072d1fc35 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 8.5E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VV1_1088 e3a548de1528fbf22ed160d072d1fc35 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 4.0E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1088 e3a548de1528fbf22ed160d072d1fc35 312 SUPERFAMILY SSF161098 93 294 2.62E-25 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1088 e3a548de1528fbf22ed160d072d1fc35 312 Gene3D G3DSA:1.10.3720.10 86 306 4.9E-25 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2392 9f882789279d4eef5a40a963edfb21e4 406 Gene3D G3DSA:3.20.20.140 60 358 3.0E-158 T 14-10-2018 VV1_2392 9f882789279d4eef5a40a963edfb21e4 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 396 9.2E-152 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2392 9f882789279d4eef5a40a963edfb21e4 406 SUPERFAMILY SSF51338 1 397 1.27E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_2392 9f882789279d4eef5a40a963edfb21e4 406 SUPERFAMILY SSF51556 59 358 5.11E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_2392 9f882789279d4eef5a40a963edfb21e4 406 Pfam PF01979 Amidohydrolase family 56 373 7.1E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VV1_2392 9f882789279d4eef5a40a963edfb21e4 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 398 40.9 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2392 9f882789279d4eef5a40a963edfb21e4 406 Gene3D G3DSA:2.30.40.10 7 395 3.0E-158 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 4.6E-78 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 Gene3D G3DSA:3.10.290.10 326 394 9.4E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 3.3E-127 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 SUPERFAMILY SSF55174 320 394 4.32E-15 T 14-10-2018 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 SUPERFAMILY SSF52374 6 316 7.04E-98 T 14-10-2018 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 Gene3D G3DSA:1.10.240.10 218 325 2.2E-33 T 14-10-2018 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 Gene3D G3DSA:3.40.50.620 5 217 5.5E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.418 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV1_1683 2754658c3a1d1d976f61f0cf0c09a977 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.7E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VV2_1638 bf27682429a5a142f551b7bc2f649690 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 6.1E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_1638 bf27682429a5a142f551b7bc2f649690 157 Gene3D G3DSA:3.30.700.10 8 147 2.8E-12 T 14-10-2018 VV2_1638 bf27682429a5a142f551b7bc2f649690 157 SUPERFAMILY SSF54523 8 150 2.67E-15 T 14-10-2018 VV2_1638 bf27682429a5a142f551b7bc2f649690 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 2.7E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_1638 bf27682429a5a142f551b7bc2f649690 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 18 32 8.6E-6 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV2_1638 bf27682429a5a142f551b7bc2f649690 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 148 157 8.6E-6 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV2_1638 bf27682429a5a142f551b7bc2f649690 157 PRINTS PR00885 Bacterial general secretion pathway protein H signature 3 17 8.6E-6 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VV2_1638 bf27682429a5a142f551b7bc2f649690 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_2264 c0df7831988d03226096c44e18a51bb9 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 2.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 2.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 SMART SM00388 207 272 5.5E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 SMART SM00387 319 430 1.8E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2264 c0df7831988d03226096c44e18a51bb9 571 SUPERFAMILY SSF55874 261 431 1.19E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2264 c0df7831988d03226096c44e18a51bb9 571 Pfam PF00072 Response regulator receiver domain 455 560 2.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 SMART SM00448 453 564 3.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 Gene3D G3DSA:1.10.287.130 181 270 1.8E-21 T 14-10-2018 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 Gene3D G3DSA:3.40.50.2300 451 570 9.2E-35 T 14-10-2018 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 SUPERFAMILY SSF47384 195 272 1.41E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 429 3.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2264 c0df7831988d03226096c44e18a51bb9 571 SUPERFAMILY SSF52172 453 568 1.2E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2264 c0df7831988d03226096c44e18a51bb9 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 272 3.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_2264 c0df7831988d03226096c44e18a51bb9 571 Gene3D G3DSA:3.30.565.10 271 433 6.2E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 4.0E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Gene3D G3DSA:1.10.1780.10 1 148 4.9E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.2E-11 T 14-10-2018 IPR004176 Clp, N-terminal VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.5E-13 T 14-10-2018 IPR004176 Clp, N-terminal VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Gene3D G3DSA:3.40.50.300 348 544 6.4E-67 T 14-10-2018 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Gene3D G3DSA:3.40.50.300 550 764 5.2E-90 T 14-10-2018 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 SUPERFAMILY SSF52540 546 854 8.33E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 3.2E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Gene3D G3DSA:3.40.50.300 158 347 4.5E-75 T 14-10-2018 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 SUPERFAMILY SSF81923 4 156 4.05E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 SMART SM01086 766 855 4.1E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 SMART SM00382 597 748 2.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 SMART SM00382 198 344 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 SUPERFAMILY SSF52540 159 545 1.83E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.3E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal VV1_0482 3a075d157ba317b0f4584a1778e6a78c 857 Gene3D G3DSA:1.10.8.60 766 857 4.2E-25 T 14-10-2018 VV1_1688 5ff94eacc3208582cd092c75b8c5c58a 98 SUPERFAMILY SSF75471 1 94 9.68E-29 T 14-10-2018 IPR035920 YhbY-like superfamily VV1_1688 5ff94eacc3208582cd092c75b8c5c58a 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.7E-19 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VV1_1688 5ff94eacc3208582cd092c75b8c5c58a 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.3E-36 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 VV1_1688 5ff94eacc3208582cd092c75b8c5c58a 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VV1_1688 5ff94eacc3208582cd092c75b8c5c58a 98 SMART SM01103 3 86 4.5E-39 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VV1_1688 5ff94eacc3208582cd092c75b8c5c58a 98 Gene3D G3DSA:3.30.110.60 1 98 6.1E-36 T 14-10-2018 IPR035920 YhbY-like superfamily VV2_0675 dfdd90335114b6f9f0d8e9cd16f58b57 360 Pfam PF01168 Alanine racemase, N-terminal domain 12 225 5.2E-17 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0675 dfdd90335114b6f9f0d8e9cd16f58b57 360 SUPERFAMILY SSF51419 12 231 2.68E-28 T 14-10-2018 IPR029066 PLP-binding barrel VV2_0675 dfdd90335114b6f9f0d8e9cd16f58b57 360 Gene3D G3DSA:3.20.20.10 12 223 2.9E-24 T 14-10-2018 IPR029066 PLP-binding barrel VV1_2862 d0d2d02ee714fcb988a8c455d2dc39f5 207 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV1_2862 d0d2d02ee714fcb988a8c455d2dc39f5 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.5E-10 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV1_2862 d0d2d02ee714fcb988a8c455d2dc39f5 207 Gene3D G3DSA:1.20.120.1760 3 198 3.3E-20 T 14-10-2018 VV2_0771 f5280ebe36c67ded5eb0cf954b4dd9b3 204 Pfam PF01810 LysE type translocator 15 202 4.5E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV2_0771 f5280ebe36c67ded5eb0cf954b4dd9b3 204 PIRSF PIRSF006324 1 204 1.7E-41 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_1517 299161419ea7dcafa0c3050a6f27149a 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.8E-129 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VV1_1517 299161419ea7dcafa0c3050a6f27149a 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.389 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VV1_1517 299161419ea7dcafa0c3050a6f27149a 306 SUPERFAMILY SSF56601 3 306 7.92E-115 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_1517 299161419ea7dcafa0c3050a6f27149a 306 Gene3D G3DSA:3.40.710.10 1 306 1.7E-109 T 14-10-2018 VV1_1517 299161419ea7dcafa0c3050a6f27149a 306 Pfam PF04960 Glutaminase 22 306 4.7E-112 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 SUPERFAMILY SSF55658 1 57 1.52E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.6E-22 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 Gene3D G3DSA:3.40.5.10 1 50 5.0E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.707 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 3.2E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 Gene3D G3DSA:3.10.430.100 61 149 5.2E-31 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 SUPERFAMILY SSF55653 60 149 7.06E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VV1_1390 938c23feb2234aa067d34f57176a6ecc 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-55 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1080 d08791eef3e8ce63dabd5e0df32ef62e 368 Gene3D G3DSA:2.40.50.100 68 196 7.0E-74 T 14-10-2018 VV1_1080 d08791eef3e8ce63dabd5e0df32ef62e 368 SUPERFAMILY SSF111369 58 273 5.1E-42 T 14-10-2018 VV1_1080 d08791eef3e8ce63dabd5e0df32ef62e 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 269 2.7E-27 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_1080 d08791eef3e8ce63dabd5e0df32ef62e 368 Gene3D G3DSA:2.40.420.20 280 351 7.0E-74 T 14-10-2018 VV1_1080 d08791eef3e8ce63dabd5e0df32ef62e 368 Gene3D G3DSA:2.40.30.170 58 279 7.0E-74 T 14-10-2018 VV1_1080 d08791eef3e8ce63dabd5e0df32ef62e 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 3.8E-75 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV1_1080 d08791eef3e8ce63dabd5e0df32ef62e 368 Gene3D G3DSA:1.10.287.470 103 162 7.0E-74 T 14-10-2018 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 217 236 1.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 189 207 1.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 363 385 1.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 426 446 1.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 Pfam PF01235 Sodium:alanine symporter family 51 471 8.9E-150 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0415 54d5362ae10c5a864c69311e332d2170 513 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 460 7.5E-135 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_1559 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 2.8E-102 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1559 2555b39087b717e6c11310b006ead891 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV1_1559 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.1740.10 1 121 3.6E-45 T 14-10-2018 VV1_1559 2555b39087b717e6c11310b006ead891 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 2.7E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VV1_1559 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88946 2 107 4.24E-32 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1559 2555b39087b717e6c11310b006ead891 192 Gene3D G3DSA:1.10.10.10 122 192 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1559 2555b39087b717e6c11310b006ead891 192 SUPERFAMILY SSF88659 124 185 1.61E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VV1_1559 2555b39087b717e6c11310b006ead891 192 Pfam PF04542 Sigma-70 region 2 25 92 5.9E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VV1_1559 2555b39087b717e6c11310b006ead891 192 Pfam PF08281 Sigma-70, region 4 134 181 3.6E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VV2_0252 85f6dc40ab9c9a6569d41ddb4865040f 144 SUPERFAMILY SSF54637 1 138 3.32E-29 T 14-10-2018 IPR029069 HotDog domain superfamily VV2_0252 85f6dc40ab9c9a6569d41ddb4865040f 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 2.6E-37 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VV2_0252 85f6dc40ab9c9a6569d41ddb4865040f 144 Gene3D G3DSA:3.10.129.10 1 142 3.2E-56 T 14-10-2018 VV2_0252 85f6dc40ab9c9a6569d41ddb4865040f 144 Pfam PF03061 Thioesterase superfamily 52 128 1.7E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 SMART SM00357 6 70 1.3E-24 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 SUPERFAMILY SSF50249 2 70 2.1E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 PIRSF PIRSF002599 1 76 8.9E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 Gene3D G3DSA:2.40.50.140 2 76 1.6E-25 T 14-10-2018 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 4 71 1.5E-40 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 4.5E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 PRINTS PR00050 Cold shock protein signature 43 61 1.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV1_2119 0ff1bbe0e8637217eae9d297fe5d2275 76 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site VV2_1186 d16dd0dfa322eb2b6badcfc911d83bcd 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 5.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1186 d16dd0dfa322eb2b6badcfc911d83bcd 314 Gene3D G3DSA:1.10.10.10 22 106 3.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1186 d16dd0dfa322eb2b6badcfc911d83bcd 314 Gene3D G3DSA:3.40.190.290 110 305 5.0E-36 T 14-10-2018 VV2_1186 d16dd0dfa322eb2b6badcfc911d83bcd 314 Pfam PF03466 LysR substrate binding domain 107 305 3.5E-28 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1186 d16dd0dfa322eb2b6badcfc911d83bcd 314 SUPERFAMILY SSF46785 22 105 7.63E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1186 d16dd0dfa322eb2b6badcfc911d83bcd 314 SUPERFAMILY SSF53850 110 308 1.34E-30 T 14-10-2018 VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 Gene3D G3DSA:3.40.50.2300 2 120 1.2E-32 T 14-10-2018 VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 Gene3D G3DSA:1.10.10.10 121 234 2.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 Pfam PF00072 Response regulator receiver domain 8 115 3.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 6.6E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 SMART SM00448 5 115 2.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 SUPERFAMILY SSF52172 3 125 1.71E-35 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 SMART SM00862 151 227 4.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_1414 53d9e12c31bda9bfef26871b879891ed 234 SUPERFAMILY SSF46894 128 229 1.67E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 SMART SM00342 190 272 9.6E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 Pfam PF02311 AraC-like ligand binding domain 18 150 1.1E-25 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 SUPERFAMILY SSF46689 227 274 2.15E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 Gene3D G3DSA:1.10.10.60 233 276 1.4E-16 T 14-10-2018 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 SUPERFAMILY SSF51215 31 156 1.7E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like VV2_0572 c61937dfef5cc3091a217db1f3016592 276 Pfam PF12833 Helix-turn-helix domain 196 273 1.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 SUPERFAMILY SSF46689 174 224 1.79E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 1.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 1.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0572 c61937dfef5cc3091a217db1f3016592 276 Gene3D G3DSA:1.10.10.60 173 232 1.6E-14 T 14-10-2018 VV2_0687 c9b2a3cc87fafd515aa4c0016cbfa260 291 Gene3D G3DSA:1.10.3720.10 31 290 1.7E-63 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0687 c9b2a3cc87fafd515aa4c0016cbfa260 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 29 286 4.6E-125 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 VV2_0687 c9b2a3cc87fafd515aa4c0016cbfa260 291 SUPERFAMILY SSF161098 28 283 3.14E-54 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0687 c9b2a3cc87fafd515aa4c0016cbfa260 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 27 285 1.0E-100 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VV2_0687 c9b2a3cc87fafd515aa4c0016cbfa260 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 287 7.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_3105 658b4ef9f7a0e7dad3c9773f4e71a029 209 Pfam PF13743 Thioredoxin 6 175 4.0E-21 T 14-10-2018 VV1_3105 658b4ef9f7a0e7dad3c9773f4e71a029 209 Gene3D G3DSA:3.40.30.10 1 208 1.3E-58 T 14-10-2018 VV1_3105 658b4ef9f7a0e7dad3c9773f4e71a029 209 SUPERFAMILY SSF52833 1 184 1.74E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0913 381a652e08fd989364ae39353a30d0e8 170 PIRSF PIRSF011443 2 170 3.4E-73 T 14-10-2018 IPR026267 Inner membrane protein YgjV VV2_0913 381a652e08fd989364ae39353a30d0e8 170 Pfam PF10688 Bacterial inner membrane protein 7 163 5.0E-57 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VV1_3096 91379f31d8e9bf2a4e82e0918134e86e 355 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 355 3.6E-138 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VV1_3096 91379f31d8e9bf2a4e82e0918134e86e 355 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 355 27.045 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VV1_3096 91379f31d8e9bf2a4e82e0918134e86e 355 Pfam PF03116 NQR2, RnfD, RnfE family 6 354 4.9E-105 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VV1_3004 bafc40b2276163d1e6c0488b803b229b 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 334 32.761 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VV1_3004 bafc40b2276163d1e6c0488b803b229b 338 Gene3D G3DSA:3.30.160.60 303 338 2.9E-18 T 14-10-2018 VV1_3004 bafc40b2276163d1e6c0488b803b229b 338 Gene3D G3DSA:1.10.8.1150 40 111 8.4E-6 T 14-10-2018 VV1_3004 bafc40b2276163d1e6c0488b803b229b 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 337 2.0E-99 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VV1_3004 bafc40b2276163d1e6c0488b803b229b 338 Pfam PF02618 YceG-like family 43 329 2.8E-81 T 14-10-2018 IPR003770 Endolytic murein transglycosylase VV1_2685 4b9779127d0822fcc2984119f0f2828b 228 Gene3D G3DSA:3.40.50.2300 3 152 1.1E-27 T 14-10-2018 VV1_2685 4b9779127d0822fcc2984119f0f2828b 228 SUPERFAMILY SSF52172 5 135 1.39E-32 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2685 4b9779127d0822fcc2984119f0f2828b 228 SMART SM00448 5 118 9.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2685 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF00072 Response regulator receiver domain 7 118 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2685 4b9779127d0822fcc2984119f0f2828b 228 Pfam PF12431 Transcriptional regulator 134 162 4.0E-8 T 14-10-2018 IPR028141 Transcriptional regulator VV1_2685 4b9779127d0822fcc2984119f0f2828b 228 PIRSF PIRSF006171 3 228 8.1E-83 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 PIRSF PIRSF005572 2 384 1.7E-138 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 SUPERFAMILY SSF53383 5 390 1.08E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.418 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 Gene3D G3DSA:3.90.1150.10 5 375 5.3E-168 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 Gene3D G3DSA:3.40.640.10 16 262 5.3E-168 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 Pfam PF00266 Aminotransferase class-V 5 368 1.5E-89 T 14-10-2018 IPR000192 Aminotransferase class V domain VV1_0438 22fabdae28da8b1ea7bd8d4651e919fc 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.7E-229 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 Pfam PF00005 ABC transporter 35 174 3.9E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 SMART SM00382 42 225 9.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 SUPERFAMILY SSF52540 18 255 3.73E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 SUPERFAMILY SSF50331 251 371 3.97E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 Gene3D G3DSA:3.40.50.300 17 235 6.0E-69 T 14-10-2018 VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 Gene3D G3DSA:2.40.50.940 236 298 6.5E-11 T 14-10-2018 VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 Gene3D G3DSA:2.40.50.140 299 320 6.5E-11 T 14-10-2018 VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 6.5E-156 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VV1_2604 1bcca96b8b773e16d4e6b07f0e88ac38 377 Pfam PF08402 TOBE domain 292 371 1.3E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VV1_1566 6f83b778f4debc145b7a4941276db046 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_1566 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.3E-109 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1566 6f83b778f4debc145b7a4941276db046 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 1.2E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_1566 6f83b778f4debc145b7a4941276db046 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 1.8E-39 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VV1_1566 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF52540 29 224 7.02E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1566 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.40.50.300 20 202 1.1E-52 T 14-10-2018 VV1_1566 6f83b778f4debc145b7a4941276db046 320 Gene3D G3DSA:3.30.300.20 204 318 2.8E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV1_1566 6f83b778f4debc145b7a4941276db046 320 SUPERFAMILY SSF54814 200 316 3.6E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VV1_1566 6f83b778f4debc145b7a4941276db046 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.717 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0911 a62e91a368a8f9fa10b37ac956244f21 302 SUPERFAMILY SSF103481 189 291 2.35E-10 T 14-10-2018 VV1_0911 a62e91a368a8f9fa10b37ac956244f21 302 SUPERFAMILY SSF103481 45 144 1.83E-12 T 14-10-2018 VV1_0911 a62e91a368a8f9fa10b37ac956244f21 302 Pfam PF00892 EamA-like transporter family 156 286 2.3E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0911 a62e91a368a8f9fa10b37ac956244f21 302 Pfam PF00892 EamA-like transporter family 9 141 2.8E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_1544 5662f1d48d2410929b59934af3c346af 298 Gene3D G3DSA:3.40.190.290 89 296 3.8E-65 T 14-10-2018 VV1_1544 5662f1d48d2410929b59934af3c346af 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 54.759 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VV1_1544 5662f1d48d2410929b59934af3c346af 298 SUPERFAMILY SSF46785 4 113 1.4E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1544 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1544 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1544 5662f1d48d2410929b59934af3c346af 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1544 5662f1d48d2410929b59934af3c346af 298 SUPERFAMILY SSF53850 95 295 4.52E-21 T 14-10-2018 VV1_1544 5662f1d48d2410929b59934af3c346af 298 Pfam PF03466 LysR substrate binding domain 95 274 2.5E-12 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1544 5662f1d48d2410929b59934af3c346af 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1544 5662f1d48d2410929b59934af3c346af 298 Gene3D G3DSA:1.10.10.10 2 85 3.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1544 5662f1d48d2410929b59934af3c346af 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 1.2E-106 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 Gene3D G3DSA:1.10.287.950 291 623 1.2E-67 T 14-10-2018 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 SUPERFAMILY SSF103190 98 184 9.16E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 Gene3D G3DSA:3.30.450.20 62 173 1.0E-64 T 14-10-2018 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 SUPERFAMILY SSF58104 314 621 2.49E-73 T 14-10-2018 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 589 1.5E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 Pfam PF02743 Cache domain 38 254 1.8E-29 T 14-10-2018 IPR033479 Double Cache domain 1 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 SMART SM00304 292 346 2.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 Gene3D G3DSA:3.30.450.20 49 266 1.0E-64 T 14-10-2018 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 SMART SM00283 361 622 1.7E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2055 50946c7ef5b0f12f34bd0c0dd7b524df 623 Pfam PF00672 HAMP domain 293 343 7.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0856 13caa315a99dbfb1cb7ae2b65a48031b 467 Pfam PF00860 Permease family 24 416 3.1E-98 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VV1_0856 13caa315a99dbfb1cb7ae2b65a48031b 467 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 446 8.2E-127 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VV1_0856 13caa315a99dbfb1cb7ae2b65a48031b 467 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VV1_0856 13caa315a99dbfb1cb7ae2b65a48031b 467 TIGRFAM TIGR03173 pbuX: xanthine permease 29 448 2.6E-132 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 VV1_0504 02a552920d57aaf0138a7844c760d050 320 Gene3D G3DSA:3.40.50.11270 16 100 7.6E-108 T 14-10-2018 VV1_0504 02a552920d57aaf0138a7844c760d050 320 Gene3D G3DSA:3.40.1010.20 10 286 7.6E-108 T 14-10-2018 VV1_0504 02a552920d57aaf0138a7844c760d050 320 Pfam PF02401 LytB protein 7 288 7.1E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VV1_0504 02a552920d57aaf0138a7844c760d050 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 1.3E-96 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VV1_0504 02a552920d57aaf0138a7844c760d050 320 Gene3D G3DSA:3.40.1010.20 101 202 7.6E-108 T 14-10-2018 VV1_0504 02a552920d57aaf0138a7844c760d050 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.803 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VV1_0969 72c18d20fae69fd14a4bfa47246151a4 177 Gene3D G3DSA:3.30.420.470 4 171 3.6E-12 T 14-10-2018 VV1_0969 72c18d20fae69fd14a4bfa47246151a4 177 Pfam PF13358 DDE superfamily endonuclease 7 146 8.0E-27 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.931 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 1.9E-28 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 SUPERFAMILY SSF50486 208 310 3.73E-32 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 SUPERFAMILY SSF53328 3 207 1.03E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 6.3E-107 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 Gene3D G3DSA:3.40.50.170 1 209 9.7E-88 T 14-10-2018 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 Gene3D G3DSA:3.10.25.10 210 314 7.4E-37 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_1047 11d0511be51cc9ef2ed680ccb0372ca7 315 Pfam PF00551 Formyl transferase 6 183 2.8E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 7.4E-152 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 Pfam PF01235 Sodium:alanine symporter family 54 448 3.4E-138 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 4.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 4.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2695 216c543ef9f3393632f65cdceb0401b1 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.3E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2598 9a7d1b432cab05cb89e1239a3415aea6 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VV1_2598 9a7d1b432cab05cb89e1239a3415aea6 406 Pfam PF00909 Ammonium Transporter Family 23 399 3.3E-88 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VV1_2598 9a7d1b432cab05cb89e1239a3415aea6 406 Gene3D G3DSA:1.10.3430.10 1 406 3.1E-102 T 14-10-2018 IPR029020 Ammonium/urea transporter VV1_2598 9a7d1b432cab05cb89e1239a3415aea6 406 SUPERFAMILY SSF111352 17 384 1.57E-96 T 14-10-2018 VV1_1669 463ce0d1583e31707b0fb43efa4e2916 331 SUPERFAMILY SSF52540 9 262 5.59E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1669 463ce0d1583e31707b0fb43efa4e2916 331 Gene3D G3DSA:3.40.50.300 8 331 3.2E-79 T 14-10-2018 VV1_1669 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF00005 ABC transporter 35 192 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1669 463ce0d1583e31707b0fb43efa4e2916 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.0E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1669 463ce0d1583e31707b0fb43efa4e2916 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.5E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1669 463ce0d1583e31707b0fb43efa4e2916 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1669 463ce0d1583e31707b0fb43efa4e2916 331 SMART SM00382 43 241 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1452 32cc0ed60a75969ce27b1b6e08976549 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 2.4E-54 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_1452 32cc0ed60a75969ce27b1b6e08976549 186 Gene3D G3DSA:3.90.950.10 2 186 1.5E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_1452 32cc0ed60a75969ce27b1b6e08976549 186 Pfam PF02545 Maf-like protein 3 184 1.9E-61 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_1452 32cc0ed60a75969ce27b1b6e08976549 186 SUPERFAMILY SSF52972 1 184 2.09E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_1452 32cc0ed60a75969ce27b1b6e08976549 186 PIRSF PIRSF006305 1 186 2.8E-58 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_1452 32cc0ed60a75969ce27b1b6e08976549 186 Hamap MF_00528 Septum formation protein Maf [maf]. 3 186 29.879 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 SUPERFAMILY SSF63380 1 89 6.38E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 Gene3D G3DSA:2.40.30.20 1 89 2.9E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 Pfam PF00677 Lumazine binding domain 100 184 6.0E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 Pfam PF00677 Lumazine binding domain 3 87 2.7E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 SUPERFAMILY SSF63380 93 195 8.08E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 PIRSF PIRSF000498 1 212 1.1E-79 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 199 1.6E-66 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0322 9cf2731766ea2f7d3e9b84e2465fea6a 218 Gene3D G3DSA:2.40.30.20 102 206 4.6E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 Gene3D G3DSA:2.40.50.100 93 226 1.9E-6 T 14-10-2018 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 Gene3D G3DSA:2.40.30.170 350 443 2.1E-14 T 14-10-2018 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 Gene3D G3DSA:2.40.30.170 80 92 1.9E-6 T 14-10-2018 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 388 1.3E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 104 124 1.3E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 62 85 1.3E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 388 411 1.3E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 431 446 1.3E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 331 352 1.3E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 446 466 1.3E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 Gene3D G3DSA:2.40.50.100 313 349 2.1E-14 T 14-10-2018 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 51 467 6.9E-135 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 Gene3D G3DSA:1.10.287.470 245 312 2.1E-14 T 14-10-2018 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 Gene3D G3DSA:1.10.287.470 127 205 1.9E-6 T 14-10-2018 VV2_0483 360e435904838ddb0fd8f679c6c03d8e 467 Pfam PF13437 HlyD family secretion protein 319 434 1.7E-19 T 14-10-2018 VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 SMART SM00100 11 128 7.4E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 SUPERFAMILY SSF51206 8 128 4.06E-16 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 432 2.8E-41 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.6E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 Gene3D G3DSA:2.60.120.10 5 139 1.3E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 Gene3D G3DSA:3.10.580.10 140 288 2.0E-18 T 14-10-2018 VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 SUPERFAMILY SSF54631 144 276 1.97E-17 T 14-10-2018 VV1_1239 b61ab9a765fe3b7bf8908f04da96c268 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 5.2E-37 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 1.7E-112 T 14-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.3E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 SUPERFAMILY SSF46785 3 69 1.97E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 Gene3D G3DSA:3.40.1410.10 70 228 4.4E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 SUPERFAMILY SSF64288 53 228 5.02E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 Gene3D G3DSA:1.10.10.10 2 68 6.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 Pfam PF07702 UTRA domain 86 223 4.7E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 SMART SM00345 6 65 1.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 SMART SM00866 86 225 6.2E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1671 246c67e557d2646818fd54a0447f7d5a 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 Gene3D G3DSA:3.40.430.10 1 162 3.2E-60 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 PIRSF PIRSF000194 1 161 2.9E-62 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 SUPERFAMILY SSF53597 1 160 2.57E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 14-10-2018 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 14-10-2018 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.1E-14 T 14-10-2018 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 14-10-2018 VV1_0666 f5ced6011ed5e23de331d717534e9847 162 Pfam PF00186 Dihydrofolate reductase 3 159 1.4E-60 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VV2_1266 223afadd1fa51316025a46ef1c5fe41b 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VV2_1266 223afadd1fa51316025a46ef1c5fe41b 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 24 469 1.4E-206 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VV2_1266 223afadd1fa51316025a46ef1c5fe41b 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VV2_1266 223afadd1fa51316025a46ef1c5fe41b 475 SUPERFAMILY SSF53720 4 474 2.09E-166 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV2_1266 223afadd1fa51316025a46ef1c5fe41b 475 Gene3D G3DSA:3.40.605.10 15 466 1.5E-177 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV2_1266 223afadd1fa51316025a46ef1c5fe41b 475 Gene3D G3DSA:3.40.309.10 255 443 1.5E-177 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV2_1266 223afadd1fa51316025a46ef1c5fe41b 475 Pfam PF00171 Aldehyde dehydrogenase family 17 470 5.2E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 SMART SM00267 300 474 6.2E-58 T 14-10-2018 IPR000160 GGDEF domain VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 SMART SM00091 185 251 1.3E-9 T 14-10-2018 IPR000014 PAS domain VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 Pfam PF00989 PAS fold 186 297 1.1E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 SUPERFAMILY SSF55073 316 472 7.06E-46 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 469 1.3E-43 T 14-10-2018 IPR000160 GGDEF domain VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 Gene3D G3DSA:3.30.70.270 298 473 3.9E-56 T 14-10-2018 VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 Gene3D G3DSA:3.30.450.20 172 297 6.7E-17 T 14-10-2018 VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 471 3.9E-50 T 14-10-2018 IPR000160 GGDEF domain VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 SUPERFAMILY SSF55785 174 298 1.01E-16 T 14-10-2018 IPR035965 PAS domain superfamily VV1_1421 b0d8c7d0daa7836506c099451f90277f 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 307 1.5E-13 T 14-10-2018 IPR000014 PAS domain VV2_1099 a3d86fe7a7bebac6d6751b272bfdce45 648 SMART SM00304 319 371 2.2E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1099 a3d86fe7a7bebac6d6751b272bfdce45 648 SMART SM00283 386 647 4.2E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1099 a3d86fe7a7bebac6d6751b272bfdce45 648 Gene3D G3DSA:1.10.287.950 319 648 3.2E-55 T 14-10-2018 VV2_1099 a3d86fe7a7bebac6d6751b272bfdce45 648 SUPERFAMILY SSF58104 339 646 2.88E-54 T 14-10-2018 VV2_1099 a3d86fe7a7bebac6d6751b272bfdce45 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 458 613 1.0E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0595 b9b6ee4a3c818bc11f94a198100c1c3f 421 Pfam PF14031 Putative serine dehydratase domain 311 405 1.9E-13 T 14-10-2018 IPR026956 D-serine dehydratase-like domain VV2_0595 b9b6ee4a3c818bc11f94a198100c1c3f 421 SUPERFAMILY SSF51419 48 282 2.09E-32 T 14-10-2018 IPR029066 PLP-binding barrel VV2_0595 b9b6ee4a3c818bc11f94a198100c1c3f 421 Gene3D G3DSA:2.40.37.20 33 421 2.6E-132 T 14-10-2018 VV2_0595 b9b6ee4a3c818bc11f94a198100c1c3f 421 Pfam PF01168 Alanine racemase, N-terminal domain 48 251 2.2E-14 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV2_0595 b9b6ee4a3c818bc11f94a198100c1c3f 421 SMART SM01119 311 408 3.2E-29 T 14-10-2018 IPR026956 D-serine dehydratase-like domain VV2_0595 b9b6ee4a3c818bc11f94a198100c1c3f 421 Gene3D G3DSA:3.20.20.10 51 281 2.6E-132 T 14-10-2018 IPR029066 PLP-binding barrel VV1_1903 d9faf25bea035b82b3960b1c27b339db 403 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 2.3E-68 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 VV1_0254 de019d997a159dac77deaef9da76b635 419 Gene3D G3DSA:3.40.50.720 159 311 8.8E-45 T 14-10-2018 VV1_0254 de019d997a159dac77deaef9da76b635 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 3.8E-50 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VV1_0254 de019d997a159dac77deaef9da76b635 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.6E-144 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 2.2E-23 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 SUPERFAMILY SSF51735 160 313 2.86E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0254 de019d997a159dac77deaef9da76b635 419 PIRSF PIRSF000445 1 419 1.5E-158 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 SUPERFAMILY SSF69075 315 416 8.89E-28 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 SUPERFAMILY SSF69742 1 156 1.96E-48 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 Gene3D G3DSA:3.30.460.30 1 156 2.3E-58 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.1E-52 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV1_0254 de019d997a159dac77deaef9da76b635 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.795 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VV2_1215 63ea37dbfa93e1553f790862c538222a 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 7.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1215 63ea37dbfa93e1553f790862c538222a 197 Gene3D G3DSA:1.10.357.10 49 193 6.1E-20 T 14-10-2018 VV2_1215 63ea37dbfa93e1553f790862c538222a 197 SUPERFAMILY SSF48498 81 193 7.51E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV2_1215 63ea37dbfa93e1553f790862c538222a 197 SUPERFAMILY SSF46689 3 70 4.85E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1215 63ea37dbfa93e1553f790862c538222a 197 Gene3D G3DSA:1.10.10.60 1 47 3.2E-20 T 14-10-2018 VV1_1965 c58156ac8ae95e99f7ae72040cd89fd2 161 SUPERFAMILY SSF82093 30 142 1.57E-37 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VV1_1965 c58156ac8ae95e99f7ae72040cd89fd2 161 Gene3D G3DSA:2.40.50.140 30 142 7.0E-40 T 14-10-2018 VV1_1965 c58156ac8ae95e99f7ae72040cd89fd2 161 Pfam PF03100 CcmE 4 136 2.0E-44 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VV1_1965 c58156ac8ae95e99f7ae72040cd89fd2 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 31.918 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.226 T 14-10-2018 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 SUPERFAMILY SSF52016 418 596 2.51E-51 T 14-10-2018 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 6.3E-249 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 Pfam PF00920 Dehydratase family 68 594 2.7E-146 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 Gene3D G3DSA:3.50.30.80 418 561 7.0E-48 T 14-10-2018 VV1_1099 dc3808d75e451cc4031f0a6079ed3b65 598 SUPERFAMILY SSF143975 3 408 1.31E-130 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VV2_0052 8ec417db8c8024482c1c82687e97e29a 106 Gene3D G3DSA:1.10.760.10 27 106 1.2E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0052 8ec417db8c8024482c1c82687e97e29a 106 SUPERFAMILY SSF46626 20 104 2.22E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0052 8ec417db8c8024482c1c82687e97e29a 106 Pfam PF00034 Cytochrome c 35 104 7.3E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_0149 0360ce78679ef203c5911cbdaf293e03 75 Gene3D G3DSA:2.30.30.90 1 75 1.0E-22 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain VV1_0149 0360ce78679ef203c5911cbdaf293e03 75 SMART SM00899 1 74 6.2E-22 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VV1_0149 0360ce78679ef203c5911cbdaf293e03 75 SUPERFAMILY SSF50037 4 73 5.26E-18 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal VV1_0149 0360ce78679ef203c5911cbdaf293e03 75 Pfam PF04023 FeoA domain 1 73 2.9E-17 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VV1_1333 f21169eeed10273ef86392ec9074090e 131 Pfam PF02635 DsrE/DsrF-like family 6 131 8.5E-29 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VV1_1333 f21169eeed10273ef86392ec9074090e 131 SUPERFAMILY SSF75169 6 131 5.89E-38 T 14-10-2018 IPR027396 DsrEFH-like VV1_1333 f21169eeed10273ef86392ec9074090e 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 6.1E-55 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VV1_1333 f21169eeed10273ef86392ec9074090e 131 Gene3D G3DSA:3.40.1260.10 1 131 9.1E-54 T 14-10-2018 IPR027396 DsrEFH-like VV1_2747 ce37b69beb2f53a00dd1b751cbcf97e3 578 SMART SM00304 246 300 1.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2747 ce37b69beb2f53a00dd1b751cbcf97e3 578 SMART SM00283 315 576 1.7E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2747 ce37b69beb2f53a00dd1b751cbcf97e3 578 SUPERFAMILY SSF58104 268 577 4.58E-72 T 14-10-2018 VV1_2747 ce37b69beb2f53a00dd1b751cbcf97e3 578 Pfam PF00672 HAMP domain 250 297 1.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2747 ce37b69beb2f53a00dd1b751cbcf97e3 578 Gene3D G3DSA:1.10.287.950 247 578 4.9E-68 T 14-10-2018 VV1_2747 ce37b69beb2f53a00dd1b751cbcf97e3 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 543 4.3E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2310 2a8f49cf63c4fa7a3c5789d43cb271d2 368 Gene3D G3DSA:3.40.50.2000 2 183 1.0E-19 T 14-10-2018 VV1_2310 2a8f49cf63c4fa7a3c5789d43cb271d2 368 Gene3D G3DSA:3.40.50.2000 184 366 8.4E-34 T 14-10-2018 VV1_2310 2a8f49cf63c4fa7a3c5789d43cb271d2 368 Pfam PF13439 Glycosyltransferase Family 4 18 177 7.3E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VV1_2310 2a8f49cf63c4fa7a3c5789d43cb271d2 368 SUPERFAMILY SSF53756 5 367 3.45E-61 T 14-10-2018 VV1_2310 2a8f49cf63c4fa7a3c5789d43cb271d2 368 Pfam PF00534 Glycosyl transferases group 1 199 342 3.6E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 PIRSF PIRSF000151 2 416 2.7E-165 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 Gene3D G3DSA:3.40.309.10 223 373 3.5E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 Pfam PF00171 Aldehyde dehydrogenase family 8 278 7.4E-16 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.396 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 1.1E-167 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 Gene3D G3DSA:3.40.605.10 15 408 3.5E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_0325 7a8094bc5935cce9cb393cf7c74916da 416 SUPERFAMILY SSF53720 6 408 1.83E-113 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV1_0229 75c9568c1a45bc7d75fa0d0a6f07aafc 248 SMART SM00858 126 188 6.3E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VV1_0229 75c9568c1a45bc7d75fa0d0a6f07aafc 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 2.9E-47 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VV1_0229 75c9568c1a45bc7d75fa0d0a6f07aafc 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 6.5E-38 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VV1_0229 75c9568c1a45bc7d75fa0d0a6f07aafc 248 Gene3D G3DSA:2.30.30.760 188 248 9.3E-12 T 14-10-2018 VV1_1130 d94be658812392ca75e02d2d71750ed7 238 SUPERFAMILY SSF56784 10 236 8.41E-34 T 14-10-2018 IPR036412 HAD-like superfamily VV1_1130 d94be658812392ca75e02d2d71750ed7 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 198 2.3E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_1130 d94be658812392ca75e02d2d71750ed7 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 11 194 4.3E-11 T 14-10-2018 VV1_1130 d94be658812392ca75e02d2d71750ed7 238 Gene3D G3DSA:1.20.120.1600 24 110 2.8E-55 T 14-10-2018 VV1_1130 d94be658812392ca75e02d2d71750ed7 238 Gene3D G3DSA:3.40.50.1000 12 231 2.8E-55 T 14-10-2018 IPR023214 HAD superfamily VV1_2352 02531546c89742f535904ecc001789c4 136 SUPERFAMILY SSF53850 17 133 3.8E-13 T 14-10-2018 VV1_2352 02531546c89742f535904ecc001789c4 136 Gene3D G3DSA:3.40.190.10 19 135 1.0E-10 T 14-10-2018 VV1_2756 0b5edc42cae611b559f27c72de2a281a 99 Pfam PF04342 Putative member of DMT superfamily (DUF486) 1 94 2.2E-41 T 14-10-2018 IPR007437 Protein of unknown function DUF486 VV1_2756 0b5edc42cae611b559f27c72de2a281a 99 PIRSF PIRSF021239 1 97 1.3E-49 T 14-10-2018 IPR007437 Protein of unknown function DUF486 VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 SUPERFAMILY SSF46689 5 70 1.69E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 94.985 T 14-10-2018 IPR017757 Transcriptional repressor BetI VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 SUPERFAMILY SSF48498 86 192 2.78E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 2.1E-73 T 14-10-2018 IPR017757 Transcriptional repressor BetI VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 2.7E-31 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal VV2_1686 2fd1e79262fb3b3030b5e24d442a757b 198 Gene3D G3DSA:1.10.357.10 6 195 1.2E-42 T 14-10-2018 VV1_2858 56fe2a5a2ef8a0f972b7b074410dfd07 148 Gene3D G3DSA:2.40.128.270 40 143 9.6E-31 T 14-10-2018 IPR038670 HslJ-like superfamily VV1_2858 56fe2a5a2ef8a0f972b7b074410dfd07 148 Pfam PF03724 META domain 34 141 1.9E-26 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 SUPERFAMILY SSF52788 1 148 8.24E-49 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 9.1E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 9.1E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 9.1E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 9.1E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 SMART SM00226 2 148 4.4E-41 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 3.6E-37 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VV1_3021 3ebbca7b5de10222ea2e24c72bbd5343 152 Gene3D G3DSA:3.40.50.2300 1 152 3.7E-58 T 14-10-2018 VV1_1282 e2721568e19579f8bff6212a639f6514 295 SUPERFAMILY SSF103481 36 140 1.44E-12 T 14-10-2018 VV1_1282 e2721568e19579f8bff6212a639f6514 295 SUPERFAMILY SSF103481 217 294 4.97E-11 T 14-10-2018 VV1_1282 e2721568e19579f8bff6212a639f6514 295 Pfam PF00892 EamA-like transporter family 5 135 3.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_1282 e2721568e19579f8bff6212a639f6514 295 Pfam PF00892 EamA-like transporter family 156 294 4.3E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 5.6E-30 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF54292 1 104 1.78E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 SUPERFAMILY SSF46548 105 233 8.72E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 2.8E-85 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.4E-10 T 14-10-2018 VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:1.10.1060.10 105 236 8.6E-56 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_0158 2d18228f54f593bc4b03cce3d413cd04 236 Gene3D G3DSA:3.10.20.30 1 104 6.0E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 Gene3D G3DSA:2.60.120.380 610 709 1.6E-10 T 14-10-2018 VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 Pfam PF01752 Collagenase 302 586 7.7E-109 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 Pfam PF08453 Peptidase family M9 N-terminal 57 241 2.4E-48 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 486 501 2.2E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 462 480 2.2E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 402 416 2.2E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 420 436 2.2E-22 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 627 698 4.7E-8 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VV2_1367 ac75842c0789c2d7062d7ee45635d224 711 Gene3D G3DSA:1.10.1740.190 332 477 1.4E-30 T 14-10-2018 VV2_1022 92b9e877d703be69b5d08e36fbbdadf3 157 SUPERFAMILY SSF52728 3 156 1.7E-51 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VV2_1022 92b9e877d703be69b5d08e36fbbdadf3 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 8.5E-51 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VV2_1022 92b9e877d703be69b5d08e36fbbdadf3 157 Gene3D G3DSA:3.40.35.10 1 155 1.7E-55 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VV2_1022 92b9e877d703be69b5d08e36fbbdadf3 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 5.1E-68 T 14-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 SMART SM00345 29 88 2.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 Gene3D G3DSA:1.10.10.10 17 99 3.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 SUPERFAMILY SSF53383 122 478 1.99E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 Gene3D G3DSA:3.40.640.10 156 374 4.7E-73 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 SUPERFAMILY SSF46785 21 92 4.25E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 Gene3D G3DSA:3.90.1150.10 134 478 4.7E-73 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 Pfam PF00155 Aminotransferase class I and II 147 467 2.2E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV2_1354 06a5b4dfdd53532ac90ab21001e21527 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 88 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2176 69a3261e8199aa2228b0206b4c2409da 185 Pfam PF06693 Protein of unknown function (DUF1190) 38 181 1.0E-23 T 14-10-2018 IPR009576 Biofilm formation YgiB VV2_1557 07dc69c7c2b0fa44b5a540ec359761bf 310 Gene3D G3DSA:1.10.3720.10 87 309 4.9E-32 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1557 07dc69c7c2b0fa44b5a540ec359761bf 310 SUPERFAMILY SSF161098 35 304 1.31E-34 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1557 07dc69c7c2b0fa44b5a540ec359761bf 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 3.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1557 07dc69c7c2b0fa44b5a540ec359761bf 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 1.1E-91 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VV2_1023 cd2710d77a5383aa4402525788701472 391 Gene3D G3DSA:3.40.50.10490 4 198 1.8E-55 T 14-10-2018 VV2_1023 cd2710d77a5383aa4402525788701472 391 Pfam PF01380 SIS domain 53 191 6.1E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV2_1023 cd2710d77a5383aa4402525788701472 391 SUPERFAMILY SSF53697 20 370 7.65E-49 T 14-10-2018 VV2_1023 cd2710d77a5383aa4402525788701472 391 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 379 9.2E-188 T 14-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 VV2_1023 cd2710d77a5383aa4402525788701472 391 Gene3D G3DSA:3.40.50.10490 202 373 9.1E-58 T 14-10-2018 VV1_2276 a590465a3649a53c9b2070c892a6c485 158 Pfam PF00072 Response regulator receiver domain 7 125 9.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2276 a590465a3649a53c9b2070c892a6c485 158 Gene3D G3DSA:3.40.50.2300 1 134 1.2E-22 T 14-10-2018 VV1_2276 a590465a3649a53c9b2070c892a6c485 158 SUPERFAMILY SSF52172 1 133 3.7E-23 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2276 a590465a3649a53c9b2070c892a6c485 158 SMART SM00448 4 125 2.6E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 Gene3D G3DSA:1.10.287.950 226 518 3.6E-65 T 14-10-2018 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 SMART SM00283 256 517 1.8E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 483 8.7E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 412 3.1E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 270 299 3.1E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 SMART SM00086 80 121 0.0037 T 14-10-2018 IPR001610 PAC motif VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 Pfam PF08447 PAS fold 31 115 9.7E-21 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 110 2.5E-12 T 14-10-2018 IPR000014 PAS domain VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 SUPERFAMILY SSF55785 22 115 2.65E-26 T 14-10-2018 IPR035965 PAS domain superfamily VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 Gene3D G3DSA:3.30.450.20 15 117 6.7E-26 T 14-10-2018 VV2_0072 25e6bf3c44bb951e97b7155acd94ba41 519 SUPERFAMILY SSF58104 236 518 2.22E-70 T 14-10-2018 VV2_0014 8c2a023713655793e625c894b56dfdac 358 Pfam PF01212 Beta-eliminating lyase 27 292 5.0E-32 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VV2_0014 8c2a023713655793e625c894b56dfdac 358 Gene3D G3DSA:3.90.1150.10 254 358 2.3E-10 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_0014 8c2a023713655793e625c894b56dfdac 358 SUPERFAMILY SSF53383 27 339 1.29E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0014 8c2a023713655793e625c894b56dfdac 358 Gene3D G3DSA:3.40.640.10 2 253 6.4E-64 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 SUPERFAMILY SSF46689 170 216 5.38E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 SUPERFAMILY SSF46689 220 269 6.72E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 262 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 SUPERFAMILY SSF51215 30 133 2.48E-5 T 14-10-2018 IPR037923 Transcription regulator HTH-like VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 SMART SM00342 183 266 2.1E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 Pfam PF12833 Helix-turn-helix domain 189 267 2.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 9.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 9.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 Gene3D G3DSA:1.10.10.60 218 270 2.3E-14 T 14-10-2018 VV2_1119 80b28fce7a569b46ef27a2131c7b9afc 272 Gene3D G3DSA:1.10.10.60 169 217 2.1E-10 T 14-10-2018 VV1_0786 7822db718c328b164886f685d859ea4a 378 Pfam PF10531 SLBB domain 257 303 6.8E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_0786 7822db718c328b164886f685d859ea4a 378 Pfam PF10531 SLBB domain 174 222 2.2E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_0786 7822db718c328b164886f685d859ea4a 378 Gene3D G3DSA:3.10.560.10 67 255 2.1E-119 T 14-10-2018 VV1_0786 7822db718c328b164886f685d859ea4a 378 Gene3D G3DSA:3.10.560.10 60 342 2.1E-119 T 14-10-2018 VV1_0786 7822db718c328b164886f685d859ea4a 378 Gene3D G3DSA:1.20.5.70 345 378 7.9E-18 T 14-10-2018 VV1_0786 7822db718c328b164886f685d859ea4a 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 166 2.7E-26 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VV1_0786 7822db718c328b164886f685d859ea4a 378 Gene3D G3DSA:3.30.1950.10 89 170 2.1E-119 T 14-10-2018 VV1_1520 7aa4597977045c93894851d71402fa74 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.0E-64 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VV1_1520 7aa4597977045c93894851d71402fa74 200 Pfam PF01725 Ham1 family 4 191 5.4E-57 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VV1_1520 7aa4597977045c93894851d71402fa74 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.778 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VV1_1520 7aa4597977045c93894851d71402fa74 200 SUPERFAMILY SSF52972 1 196 1.44E-73 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_1520 7aa4597977045c93894851d71402fa74 200 Gene3D G3DSA:3.90.950.10 1 199 2.8E-82 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_1972 c1e005e8323079c5e5f66dc72086cc78 408 SUPERFAMILY SSF56935 27 408 1.16E-86 T 14-10-2018 VV1_1972 c1e005e8323079c5e5f66dc72086cc78 408 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 408 7.2E-117 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV1_1972 c1e005e8323079c5e5f66dc72086cc78 408 Gene3D G3DSA:2.40.160.60 27 408 2.9E-111 T 14-10-2018 VV2_0531 b6ab433316d30d288e67f5b6baa5940e 152 Gene3D G3DSA:3.40.140.10 2 147 2.3E-40 T 14-10-2018 VV2_0531 b6ab433316d30d288e67f5b6baa5940e 152 SUPERFAMILY SSF53927 8 146 1.08E-31 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV2_0531 b6ab433316d30d288e67f5b6baa5940e 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV2_0531 b6ab433316d30d288e67f5b6baa5940e 152 PIRSF PIRSF006019 1 147 3.8E-44 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VV2_0531 b6ab433316d30d288e67f5b6baa5940e 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 2.5E-25 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 SUPERFAMILY SSF55486 10 500 4.64E-120 T 14-10-2018 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PIRSF PIRSF006615 9 500 8.1E-202 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 Gene3D G3DSA:1.10.1370.30 9 500 2.8E-194 T 14-10-2018 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 16 499 6.9E-98 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 298 314 5.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 337 356 5.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 451 469 5.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 251 270 5.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 155 175 5.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 407 428 5.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_2698 5a77adfb92ac7406deb37f842028e6f3 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 271 290 5.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 SUPERFAMILY SSF55060 206 382 2.88E-53 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 SUPERFAMILY SSF54211 2 204 7.29E-65 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 14-10-2018 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 14-10-2018 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 14-10-2018 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 14-10-2018 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 6.5E-149 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 Gene3D G3DSA:3.30.70.890 203 358 5.2E-133 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.181 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 PIRSF PIRSF000530 1 385 1.4E-128 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 Gene3D G3DSA:3.30.230.10 23 202 5.2E-133 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.8E-22 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VV1_1772 be442396542cf2a2a458c9cd1e2d05b2 386 Pfam PF08544 GHMP kinases C terminal 280 361 7.5E-11 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VV2_1417 5690517fd7cc688649d5790e2475dfe0 300 SUPERFAMILY SSF46785 3 111 4.95E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1417 5690517fd7cc688649d5790e2475dfe0 300 Pfam PF03466 LysR substrate binding domain 88 289 4.4E-42 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1417 5690517fd7cc688649d5790e2475dfe0 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1417 5690517fd7cc688649d5790e2475dfe0 300 SUPERFAMILY SSF53850 90 292 1.54E-44 T 14-10-2018 VV2_1417 5690517fd7cc688649d5790e2475dfe0 300 Gene3D G3DSA:1.10.10.10 3 89 8.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1417 5690517fd7cc688649d5790e2475dfe0 300 Gene3D G3DSA:3.40.190.290 91 288 1.1E-58 T 14-10-2018 VV1_0658 779092c2844dcb4ff9cc213bde0d60f1 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 8.3E-23 T 14-10-2018 IPR006869 Domain of unknown function DUF547 VV2_0130 1af4b1ba931bcb9ab791677a7040f7ca 603 SUPERFAMILY SSF56436 379 601 2.02E-57 T 14-10-2018 IPR016187 C-type lectin fold VV2_0130 1af4b1ba931bcb9ab791677a7040f7ca 603 Pfam PF08308 PEGA domain 295 359 1.3E-24 T 14-10-2018 IPR013229 PEGA VV2_0130 1af4b1ba931bcb9ab791677a7040f7ca 603 Pfam PF03781 Sulfatase-modifying factor enzyme 1 382 601 2.2E-50 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VV2_0130 1af4b1ba931bcb9ab791677a7040f7ca 603 Gene3D G3DSA:3.90.1580.10 380 601 1.1E-55 T 14-10-2018 VV1_0636 a6f227647786086df79416d24d23b2fd 585 Pfam PF13444 Acetyltransferase (GNAT) domain 333 433 1.6E-21 T 14-10-2018 VV1_0636 a6f227647786086df79416d24d23b2fd 585 Pfam PF01553 Acyltransferase 66 193 1.3E-5 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_0636 a6f227647786086df79416d24d23b2fd 585 SUPERFAMILY SSF55729 315 455 1.11E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_0636 a6f227647786086df79416d24d23b2fd 585 SUPERFAMILY SSF69593 59 243 1.83E-7 T 14-10-2018 VV1_0636 a6f227647786086df79416d24d23b2fd 585 SMART SM00563 75 199 1.4E-5 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_0636 a6f227647786086df79416d24d23b2fd 585 Gene3D G3DSA:3.40.630.30 333 457 1.3E-7 T 14-10-2018 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 Pfam PF00293 NUDIX domain 137 236 9.1E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 99 129 2.3E-10 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 PRINTS PR00502 NUDIX hydrolase family signature 159 173 3.0E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 PRINTS PR00502 NUDIX hydrolase family signature 173 188 3.0E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 Gene3D G3DSA:3.90.79.20 3 130 2.6E-33 T 14-10-2018 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 SUPERFAMILY SSF55811 62 248 7.34E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.964 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VV1_1214 54ae8db93b892bf66d9953cb99beede4 261 Gene3D G3DSA:3.90.79.10 131 260 1.3E-40 T 14-10-2018 VV1_0575 8bf2d7e33bbd431155622387886e4bb1 255 Gene3D G3DSA:3.10.20.310 55 123 6.5E-25 T 14-10-2018 VV1_0575 8bf2d7e33bbd431155622387886e4bb1 255 Gene3D G3DSA:3.40.50.11690 125 252 5.3E-37 T 14-10-2018 VV1_0575 8bf2d7e33bbd431155622387886e4bb1 255 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.339 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 VV1_0575 8bf2d7e33bbd431155622387886e4bb1 255 Pfam PF03799 Cell division protein FtsQ 127 239 2.2E-24 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB VV1_0575 8bf2d7e33bbd431155622387886e4bb1 255 Pfam PF08478 POTRA domain, FtsQ-type 54 123 2.3E-18 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:1.10.10.10 1 56 6.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.0E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Gene3D G3DSA:3.40.50.1360 73 223 3.8E-5 T 14-10-2018 VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF100950 76 233 1.74E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM00420 9 61 2.4E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 5.3E-43 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SMART SM01134 73 234 1.4E-55 T 14-10-2018 VV1_0642 bb44f7ab6c4061e28b15b5fd5faf95f7 253 SUPERFAMILY SSF46785 9 68 6.92E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_3196 86ec30a6cbeea8cbedbfce10956537b6 335 Pfam PF11168 Protein of unknown function (DUF2955) 9 147 3.4E-17 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VV1_2915 61aec7809a86773a4f27fe7ea9730b56 245 Gene3D G3DSA:3.20.20.70 1 245 4.4E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_2915 61aec7809a86773a4f27fe7ea9730b56 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.3E-75 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VV1_2915 61aec7809a86773a4f27fe7ea9730b56 245 SUPERFAMILY SSF51366 2 242 3.63E-63 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV1_2915 61aec7809a86773a4f27fe7ea9730b56 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.2E-77 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VV1_2915 61aec7809a86773a4f27fe7ea9730b56 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.571 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 SUPERFAMILY SSF53822 61 329 1.43E-86 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 Gene3D G3DSA:3.40.50.2300 62 308 7.5E-84 T 14-10-2018 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 Gene3D G3DSA:3.40.50.2300 160 289 7.5E-84 T 14-10-2018 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 SMART SM00354 1 71 1.1E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 Gene3D G3DSA:1.10.260.40 1 59 6.1E-21 T 14-10-2018 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 SUPERFAMILY SSF47413 2 59 3.07E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 4.5E-37 T 14-10-2018 VV2_1282 dd2624288713293a4c660952a2c9aa1c 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 SUPERFAMILY SSF52540 364 821 1.27E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 814 2.0E-298 T 14-10-2018 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 SUPERFAMILY SSF52980 843 1140 4.08E-73 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 PIRSF PIRSF000980 1 1160 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 Gene3D G3DSA:3.40.50.10930 4 321 1.2E-123 T 14-10-2018 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 SUPERFAMILY SSF52540 2 351 3.85E-122 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 Gene3D G3DSA:1.10.10.160 79 187 1.2E-123 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 Gene3D G3DSA:3.40.50.300 339 815 1.1E-191 T 14-10-2018 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1154 20.749 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 Gene3D G3DSA:1.10.10.990 883 961 2.0E-18 T 14-10-2018 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1121 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VV1_1795 08c2981756f8b75e52daa8adc8b8de7d 1162 Gene3D G3DSA:1.10.486.10 457 669 1.1E-191 T 14-10-2018 VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 Gene3D G3DSA:3.30.70.270 346 514 4.6E-47 T 14-10-2018 VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 509 6.6E-35 T 14-10-2018 IPR000160 GGDEF domain VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 Pfam PF03924 CHASE domain 85 274 1.2E-28 T 14-10-2018 IPR006189 CHASE domain VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 SMART SM01079 80 276 8.4E-37 T 14-10-2018 IPR006189 CHASE domain VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 513 3.4E-34 T 14-10-2018 IPR000160 GGDEF domain VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 SUPERFAMILY SSF55073 364 513 2.04E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 SMART SM00267 348 514 2.9E-38 T 14-10-2018 IPR000160 GGDEF domain VV1_2321 bf32e6f85e8e73a7844a384300faa56d 515 Gene3D G3DSA:3.30.450.350 85 300 3.3E-10 T 14-10-2018 VV1_0672 0b841836c71a24f86f4c54265a25f9e4 333 Pfam PF00348 Polyprenyl synthetase 42 278 6.7E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VV1_0672 0b841836c71a24f86f4c54265a25f9e4 333 SUPERFAMILY SSF48576 12 332 3.04E-101 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VV1_0672 0b841836c71a24f86f4c54265a25f9e4 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VV1_0672 0b841836c71a24f86f4c54265a25f9e4 333 Gene3D G3DSA:1.10.600.10 4 333 5.5E-122 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VV1_0672 0b841836c71a24f86f4c54265a25f9e4 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VV2_0205 f6cf6ae5aba5da4b4601af446ff2fb01 275 Gene3D G3DSA:3.20.20.450 22 267 1.3E-47 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0205 f6cf6ae5aba5da4b4601af446ff2fb01 275 SUPERFAMILY SSF141868 25 263 1.96E-48 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0205 f6cf6ae5aba5da4b4601af446ff2fb01 275 Pfam PF00563 EAL domain 26 255 1.2E-43 T 14-10-2018 IPR001633 EAL domain VV2_0205 f6cf6ae5aba5da4b4601af446ff2fb01 275 SMART SM00052 13 260 9.3E-13 T 14-10-2018 IPR001633 EAL domain VV1_0282 5e0c5681789783d54870abe1a132d099 92 SUPERFAMILY SSF117991 7 92 6.93E-31 T 14-10-2018 IPR027471 YbeD-like domain superfamily VV1_0282 5e0c5681789783d54870abe1a132d099 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.438 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VV1_0282 5e0c5681789783d54870abe1a132d099 92 Gene3D G3DSA:3.30.70.260 6 92 4.7E-33 T 14-10-2018 VV1_0282 5e0c5681789783d54870abe1a132d099 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 3.0E-29 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 VV2_1140 9b86aba5116c9b97aa57a96abb9fb5a5 282 Gene3D G3DSA:3.40.50.10490 97 278 1.3E-39 T 14-10-2018 VV2_1140 9b86aba5116c9b97aa57a96abb9fb5a5 282 Gene3D G3DSA:1.10.10.10 1 76 5.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1140 9b86aba5116c9b97aa57a96abb9fb5a5 282 SUPERFAMILY SSF53697 99 275 5.37E-39 T 14-10-2018 VV2_1140 9b86aba5116c9b97aa57a96abb9fb5a5 282 Pfam PF01380 SIS domain 129 257 1.8E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV2_1140 9b86aba5116c9b97aa57a96abb9fb5a5 282 SUPERFAMILY SSF46689 2 77 1.16E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1140 9b86aba5116c9b97aa57a96abb9fb5a5 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 4.4E-20 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VV1_1675 e2cd48afca38749def88063d3d992362 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.2E-58 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VV1_1675 e2cd48afca38749def88063d3d992362 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_1675 e2cd48afca38749def88063d3d992362 340 Gene3D G3DSA:3.40.50.150 1 157 1.9E-51 T 14-10-2018 VV1_1675 e2cd48afca38749def88063d3d992362 340 SUPERFAMILY SSF53335 157 323 4.52E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1675 e2cd48afca38749def88063d3d992362 340 Pfam PF05175 Methyltransferase small domain 172 336 1.0E-60 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VV1_1675 e2cd48afca38749def88063d3d992362 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.937 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VV1_1675 e2cd48afca38749def88063d3d992362 340 Gene3D G3DSA:3.40.50.150 158 340 1.6E-43 T 14-10-2018 VV1_1807 6e4af1a952797d149315c67d45aac4b6 276 SUPERFAMILY SSF46689 214 264 5.82E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1807 6e4af1a952797d149315c67d45aac4b6 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV1_1807 6e4af1a952797d149315c67d45aac4b6 276 Pfam PF12833 Helix-turn-helix domain 186 261 6.9E-9 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_1807 6e4af1a952797d149315c67d45aac4b6 276 SMART SM00342 179 261 1.9E-10 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_1807 6e4af1a952797d149315c67d45aac4b6 276 Gene3D G3DSA:1.10.10.60 159 269 1.8E-16 T 14-10-2018 VV1_1525 55d996f6c1e9a61c06469f4b3a7db552 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.094 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VV1_1525 55d996f6c1e9a61c06469f4b3a7db552 236 Pfam PF01168 Alanine racemase, N-terminal domain 24 230 2.5E-31 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1525 55d996f6c1e9a61c06469f4b3a7db552 236 PIRSF PIRSF004848 1 236 7.6E-77 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VV1_1525 55d996f6c1e9a61c06469f4b3a7db552 236 Gene3D G3DSA:3.20.20.10 1 236 1.7E-86 T 14-10-2018 IPR029066 PLP-binding barrel VV1_1525 55d996f6c1e9a61c06469f4b3a7db552 236 SUPERFAMILY SSF51419 1 228 1.96E-81 T 14-10-2018 IPR029066 PLP-binding barrel VV1_1525 55d996f6c1e9a61c06469f4b3a7db552 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.0E-87 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VV1_1525 55d996f6c1e9a61c06469f4b3a7db552 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VV1_0015 69fc10888f4c6ff176d29ced2ce89fe5 202 Pfam PF03942 DTW domain 3 188 1.4E-50 T 14-10-2018 IPR005636 DTW VV1_0015 69fc10888f4c6ff176d29ced2ce89fe5 202 SMART SM01144 1 193 2.3E-68 T 14-10-2018 IPR005636 DTW VV1_2881 602e4074347795b4c3e6939ad5b25f99 538 Gene3D G3DSA:3.40.190.10 217 525 8.0E-143 T 14-10-2018 VV1_2881 602e4074347795b4c3e6939ad5b25f99 538 PIRSF PIRSF002741 1 537 3.7E-88 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV1_2881 602e4074347795b4c3e6939ad5b25f99 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 7.5E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV1_2881 602e4074347795b4c3e6939ad5b25f99 538 SUPERFAMILY SSF53850 35 534 5.79E-128 T 14-10-2018 VV1_2881 602e4074347795b4c3e6939ad5b25f99 538 Gene3D G3DSA:3.90.76.10 44 216 8.0E-143 T 14-10-2018 VV1_2881 602e4074347795b4c3e6939ad5b25f99 538 Gene3D G3DSA:3.10.105.10 296 513 8.0E-143 T 14-10-2018 VV2_0193 cf6a49400ef97b4bdd5124b1754b34e9 357 SUPERFAMILY SSF111369 57 274 2.62E-33 T 14-10-2018 VV2_0193 cf6a49400ef97b4bdd5124b1754b34e9 357 Gene3D G3DSA:2.40.30.170 50 278 1.7E-73 T 14-10-2018 VV2_0193 cf6a49400ef97b4bdd5124b1754b34e9 357 Gene3D G3DSA:2.40.420.20 47 348 1.7E-73 T 14-10-2018 VV2_0193 cf6a49400ef97b4bdd5124b1754b34e9 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 6.8E-72 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV2_0193 cf6a49400ef97b4bdd5124b1754b34e9 357 Gene3D G3DSA:1.10.287.470 99 158 1.7E-73 T 14-10-2018 VV2_0193 cf6a49400ef97b4bdd5124b1754b34e9 357 Gene3D G3DSA:2.40.50.100 65 197 1.7E-73 T 14-10-2018 VV2_0193 cf6a49400ef97b4bdd5124b1754b34e9 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 269 1.3E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_2472 fc7ed39efa08d56dd200560f70e04592 177 Gene3D G3DSA:3.40.50.300 1 162 7.1E-16 T 14-10-2018 VV1_2472 fc7ed39efa08d56dd200560f70e04592 177 Pfam PF01202 Shikimate kinase 10 38 1.4E-4 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VV1_2472 fc7ed39efa08d56dd200560f70e04592 177 SUPERFAMILY SSF52540 1 154 3.54E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 9.0E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 4.3E-49 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 SMART SM00411 1 91 5.8E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 Gene3D G3DSA:4.10.520.10 40 92 1.8E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 Gene3D G3DSA:4.10.520.10 2 39 1.2E-11 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.501 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 SUPERFAMILY SSF47729 1 91 4.12E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2980 84361339b5b8d15a8be4c0eec922102b 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV1_0692 05926605a38daf5c0b80849af0008920 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 PIRSF PIRSF000774 1 487 5.5E-151 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 Pfam PF04963 Sigma-54 factor, core binding domain 126 315 8.7E-59 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VV1_0692 05926605a38daf5c0b80849af0008920 487 Gene3D G3DSA:1.10.10.1330 128 246 1.4E-23 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VV1_0692 05926605a38daf5c0b80849af0008920 487 Gene3D G3DSA:1.10.10.60 427 484 3.7E-23 T 14-10-2018 VV1_0692 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 386 398 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 198 215 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 402 413 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 PRINTS PR00045 Sigma-54 factor signature 460 478 3.3E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 3.8E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0692 05926605a38daf5c0b80849af0008920 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 3.2E-72 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VV1_0692 05926605a38daf5c0b80849af0008920 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 5.4E-156 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VV1_0851 846b7357515965177ab1c139ac6f0711 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.9 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0851 846b7357515965177ab1c139ac6f0711 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VV1_0851 846b7357515965177ab1c139ac6f0711 90 SUPERFAMILY SSF63562 1 78 7.85E-26 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VV1_0851 846b7357515965177ab1c139ac6f0711 90 Gene3D G3DSA:3.90.940.10 1 90 9.6E-30 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VV1_0851 846b7357515965177ab1c139ac6f0711 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.7E-18 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VV1_0851 846b7357515965177ab1c139ac6f0711 90 SMART SM01409 8 61 1.3E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 Gene3D G3DSA:3.40.190.10 168 294 4.6E-8 T 14-10-2018 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 Gene3D G3DSA:1.10.10.10 5 90 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 Gene3D G3DSA:3.40.190.10 176 269 4.6E-8 T 14-10-2018 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 SUPERFAMILY SSF53850 96 297 5.79E-21 T 14-10-2018 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 Pfam PF03466 LysR substrate binding domain 94 297 5.0E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1132 3533fc9725d3d41033938d93e7b6ad9c 300 SUPERFAMILY SSF46785 6 86 2.1E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2377 bbd3d2726f49cb985df61ffbd89a4490 217 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 215 3.2E-73 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VV1_2377 bbd3d2726f49cb985df61ffbd89a4490 217 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 213 4.7E-77 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VV1_2377 bbd3d2726f49cb985df61ffbd89a4490 217 PIRSF PIRSF023956 2 217 6.2E-72 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VV1_2377 bbd3d2726f49cb985df61ffbd89a4490 217 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.719 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VV1_2377 bbd3d2726f49cb985df61ffbd89a4490 217 Gene3D G3DSA:3.40.50.150 1 216 2.9E-59 T 14-10-2018 VV1_2377 bbd3d2726f49cb985df61ffbd89a4490 217 SUPERFAMILY SSF53335 3 214 1.71E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0168 f2aae0872db122765cccf370cdc91741 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 1.0E-69 T 14-10-2018 IPR013559 YheO-like VV1_0168 f2aae0872db122765cccf370cdc91741 222 Pfam PF13309 HTH domain 160 217 4.9E-13 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VV1_0168 f2aae0872db122765cccf370cdc91741 222 Pfam PF08348 YheO-like PAS domain 17 123 3.8E-36 T 14-10-2018 IPR013559 YheO-like VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.0E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.0E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 6.0E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.10.109.10 78 272 7.0E-75 T 14-10-2018 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 Gene3D G3DSA:2.170.230.10 155 231 7.0E-75 T 14-10-2018 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 SUPERFAMILY SSF51306 78 298 3.56E-69 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF00717 Peptidase S24-like 86 166 1.8E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 Pfam PF10502 Signal peptidase, peptidase S26 209 269 1.8E-8 T 14-10-2018 IPR019533 Peptidase S26 VV1_1564 d2ce172a74c15c2121baa886d3ca5604 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 5.0E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VV1_1443 ad59c8bfc916aa0da10bdd45977cef9f 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1443 ad59c8bfc916aa0da10bdd45977cef9f 151 SUPERFAMILY SSF54523 7 136 1.73E-13 T 14-10-2018 VV1_1443 ad59c8bfc916aa0da10bdd45977cef9f 151 Gene3D G3DSA:3.30.700.10 7 151 4.1E-14 T 14-10-2018 VV1_1443 ad59c8bfc916aa0da10bdd45977cef9f 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1443 ad59c8bfc916aa0da10bdd45977cef9f 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_0454 814c93333308f28ce9edfe7b8b35fea0 110 Gene3D G3DSA:3.30.1360.20 15 110 1.7E-33 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VV2_0454 814c93333308f28ce9edfe7b8b35fea0 110 SUPERFAMILY SSF55248 16 109 4.58E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VV2_0454 814c93333308f28ce9edfe7b8b35fea0 110 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.734 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VV2_0454 814c93333308f28ce9edfe7b8b35fea0 110 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 17 108 2.2E-32 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VV2_0279 c7d200863cb9e98fbe5eea44bb28433d 191 SUPERFAMILY SSF110997 101 164 9.15E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV2_0279 c7d200863cb9e98fbe5eea44bb28433d 191 Gene3D G3DSA:3.30.70.1070 88 182 3.5E-20 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VV2_0279 c7d200863cb9e98fbe5eea44bb28433d 191 Pfam PF05036 Sporulation related domain 101 173 3.0E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 VV2_1613 6336ee0de80f912dd236b208d559f279 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 4.1E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VV1_2735 30716be821a368a95f6de924b70da162 323 SUPERFAMILY SSF53850 111 289 1.71E-8 T 14-10-2018 VV1_2735 30716be821a368a95f6de924b70da162 323 Gene3D G3DSA:3.40.190.10 123 249 8.4E-61 T 14-10-2018 VV1_2735 30716be821a368a95f6de924b70da162 323 PIRSF PIRSF017082 2 323 3.3E-85 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VV1_2735 30716be821a368a95f6de924b70da162 323 Gene3D G3DSA:3.40.190.150 29 314 8.4E-61 T 14-10-2018 VV1_2735 30716be821a368a95f6de924b70da162 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 320 9.8E-26 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VV1_2155 41a13d61305b44c80d638567919d8f9f 293 SUPERFAMILY SSF117396 9 271 6.8E-72 T 14-10-2018 IPR036520 UPF0759 superfamily VV1_2155 41a13d61305b44c80d638567919d8f9f 293 Gene3D G3DSA:3.20.20.410 3 273 8.4E-42 T 14-10-2018 IPR036520 UPF0759 superfamily VV1_2155 41a13d61305b44c80d638567919d8f9f 293 Pfam PF01904 Protein of unknown function DUF72 28 267 9.1E-53 T 14-10-2018 IPR002763 Protein of unknown function DUF72 VV1_0455 3304f7cc8464b6a76e3c002cb8256858 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 2.5E-116 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 VV1_0455 3304f7cc8464b6a76e3c002cb8256858 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 228 1.1E-115 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related VV1_0455 3304f7cc8464b6a76e3c002cb8256858 258 Gene3D G3DSA:3.40.50.300 1 239 1.1E-100 T 14-10-2018 VV1_0455 3304f7cc8464b6a76e3c002cb8256858 258 SUPERFAMILY SSF52540 35 222 8.63E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0455 3304f7cc8464b6a76e3c002cb8256858 258 PIRSF PIRSF028756 1 258 7.2E-134 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 VV2_1517 834d9ec45639e5bb7488c8cce9ea2dfd 436 SUPERFAMILY SSF56954 4 419 7.19E-84 T 14-10-2018 VV2_1517 834d9ec45639e5bb7488c8cce9ea2dfd 436 Pfam PF02321 Outer membrane efflux protein 22 213 3.5E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV2_1517 834d9ec45639e5bb7488c8cce9ea2dfd 436 Pfam PF02321 Outer membrane efflux protein 236 417 3.9E-34 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV2_1517 834d9ec45639e5bb7488c8cce9ea2dfd 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 432 3.9E-91 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VV2_1517 834d9ec45639e5bb7488c8cce9ea2dfd 436 Gene3D G3DSA:1.20.1600.10 21 427 5.6E-80 T 14-10-2018 VV1_0222 0559b7ae22c7f638110a9b5aa34200a7 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 4.0E-54 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VV1_0222 0559b7ae22c7f638110a9b5aa34200a7 249 SUPERFAMILY SSF117143 77 207 1.7E-15 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VV1_0222 0559b7ae22c7f638110a9b5aa34200a7 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.4E-32 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VV1_0222 0559b7ae22c7f638110a9b5aa34200a7 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.4E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV1_0222 0559b7ae22c7f638110a9b5aa34200a7 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV1_3180 428b8e2505f77388e562390083650a45 152 Pfam PF13737 Transposase DDE domain 19 127 2.6E-41 T 14-10-2018 IPR025668 Transposase DDE domain VV1_3093 38a618d84d37eab441d9afc0b0317b98 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 6.6E-90 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VV1_3093 38a618d84d37eab441d9afc0b0317b98 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.264 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VV1_3093 38a618d84d37eab441d9afc0b0317b98 192 PIRSF PIRSF006102 1 192 2.0E-64 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV1_3093 38a618d84d37eab441d9afc0b0317b98 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 4.8E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV2_1523 0311ab5657010da974c1cf75e9a5ccea 542 SMART SM00304 213 265 7.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1523 0311ab5657010da974c1cf75e9a5ccea 542 Pfam PF00672 HAMP domain 215 261 2.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1523 0311ab5657010da974c1cf75e9a5ccea 542 SMART SM00283 280 541 4.9E-68 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1523 0311ab5657010da974c1cf75e9a5ccea 542 Gene3D G3DSA:1.10.287.950 213 542 2.2E-71 T 14-10-2018 VV2_1523 0311ab5657010da974c1cf75e9a5ccea 542 SUPERFAMILY SSF58104 233 542 2.49E-72 T 14-10-2018 VV2_1523 0311ab5657010da974c1cf75e9a5ccea 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 508 8.2E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1518 86f0235c8f18130aec1ed6b9a585fdd0 208 SMART SM00478 52 201 2.7E-5 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VV1_1518 86f0235c8f18130aec1ed6b9a585fdd0 208 Gene3D G3DSA:1.10.340.30 40 153 9.4E-42 T 14-10-2018 VV1_1518 86f0235c8f18130aec1ed6b9a585fdd0 208 Gene3D G3DSA:1.10.1670.40 20 199 9.4E-42 T 14-10-2018 VV1_1518 86f0235c8f18130aec1ed6b9a585fdd0 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 172 7.0E-5 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VV1_1518 86f0235c8f18130aec1ed6b9a585fdd0 208 SUPERFAMILY SSF48150 34 201 9.94E-31 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VV1_0011 5750fb6f4da14b439198a15d89a23eda 357 Pfam PF02405 Permease MlaE 150 355 9.3E-67 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VV1_0011 5750fb6f4da14b439198a15d89a23eda 357 SUPERFAMILY SSF52091 3 82 1.67E-11 T 14-10-2018 IPR036513 STAS domain superfamily VV1_0011 5750fb6f4da14b439198a15d89a23eda 357 Gene3D G3DSA:3.30.750.24 2 84 2.3E-8 T 14-10-2018 IPR036513 STAS domain superfamily VV1_0011 5750fb6f4da14b439198a15d89a23eda 357 Pfam PF13466 STAS domain 8 83 1.4E-8 T 14-10-2018 IPR002645 STAS domain VV1_2442 f5fe847b185fce74068e52c7cd8a80d1 159 SUPERFAMILY SSF55729 1 141 1.25E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2442 f5fe847b185fce74068e52c7cd8a80d1 159 Gene3D G3DSA:3.40.630.30 10 156 3.1E-23 T 14-10-2018 VV1_2442 f5fe847b185fce74068e52c7cd8a80d1 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 2.2E-11 T 14-10-2018 IPR000182 GNAT domain VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 SUPERFAMILY SSF52540 334 517 4.04E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF12848 ABC transporter 224 309 1.0E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 Gene3D G3DSA:3.40.50.300 282 529 3.6E-51 T 14-10-2018 VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF00005 ABC transporter 337 466 1.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 Pfam PF00005 ABC transporter 18 184 2.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 SMART SM00382 343 511 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 SMART SM00382 26 238 3.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 SUPERFAMILY SSF52540 7 237 2.62E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2581 291273155cc60f19d0706e5a6e98a52c 530 Gene3D G3DSA:3.40.50.300 2 281 3.2E-57 T 14-10-2018 VV2_0713 93598cf8f2092a4d0ac08beb1774528f 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 1.7E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV2_0713 93598cf8f2092a4d0ac08beb1774528f 183 SUPERFAMILY SSF56925 29 183 5.89E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV2_0713 93598cf8f2092a4d0ac08beb1774528f 183 Gene3D G3DSA:2.40.160.20 19 183 3.3E-15 T 14-10-2018 VV1_1906 21cca0f9cae06eb56bb2d8eed3ee8008 120 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 7 120 1.0E-46 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VV1_1906 21cca0f9cae06eb56bb2d8eed3ee8008 120 SUPERFAMILY SSF52833 6 120 3.67E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_1906 21cca0f9cae06eb56bb2d8eed3ee8008 120 Pfam PF03960 ArsC family 10 119 1.9E-19 T 14-10-2018 IPR006660 Arsenate reductase-like VV1_1906 21cca0f9cae06eb56bb2d8eed3ee8008 120 Gene3D G3DSA:3.40.30.10 3 120 6.9E-48 T 14-10-2018 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PIRSF PIRSF000724 1 386 2.2E-134 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.293 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 Pfam PF00162 Phosphoglycerate kinase 6 373 2.7E-139 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 SUPERFAMILY SSF53748 3 382 1.07E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 Gene3D G3DSA:3.40.50.1260 10 379 1.9E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 Gene3D G3DSA:3.40.50.1260 165 373 1.9E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1540 2b45f422b7166dedbc3591f2f52c40a4 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.4E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_1538 7cad68b440e4fcae033dbb5e36f7e450 499 SUPERFAMILY SSF48452 30 236 1.26E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1538 7cad68b440e4fcae033dbb5e36f7e450 499 Gene3D G3DSA:1.25.40.10 24 160 1.1E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1538 7cad68b440e4fcae033dbb5e36f7e450 499 Gene3D G3DSA:1.25.40.10 161 317 3.8E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1538 7cad68b440e4fcae033dbb5e36f7e450 499 SMART SM00028 127 160 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1538 7cad68b440e4fcae033dbb5e36f7e450 499 SMART SM00028 207 240 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1538 7cad68b440e4fcae033dbb5e36f7e450 499 SMART SM00028 167 200 440.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0750 794c40a42c62236816d2d971cb084c39 105 SUPERFAMILY SSF50104 4 101 8.6E-34 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VV1_0750 794c40a42c62236816d2d971cb084c39 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 14-10-2018 IPR005824 KOW VV1_0750 794c40a42c62236816d2d971cb084c39 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0750 794c40a42c62236816d2d971cb084c39 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.2E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0750 794c40a42c62236816d2d971cb084c39 105 Gene3D G3DSA:2.30.30.30 2 104 1.1E-39 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VV1_0750 794c40a42c62236816d2d971cb084c39 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.924 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0750 794c40a42c62236816d2d971cb084c39 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.0E-22 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0750 794c40a42c62236816d2d971cb084c39 105 SMART SM00739 4 31 3.4E-4 T 14-10-2018 IPR005824 KOW VV1_0831 d2923d109ff2072f5a6f2e397d766ec9 213 Gene3D G3DSA:3.40.50.2020 1 213 2.8E-79 T 14-10-2018 VV1_0831 d2923d109ff2072f5a6f2e397d766ec9 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.6E-70 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_0831 d2923d109ff2072f5a6f2e397d766ec9 213 SUPERFAMILY SSF53271 2 211 1.02E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV1_0831 d2923d109ff2072f5a6f2e397d766ec9 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 4.1E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV1_0831 d2923d109ff2072f5a6f2e397d766ec9 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.153 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV2_0183 a849092a395400076bc8b2ddb008da5b 622 SUPERFAMILY SSF53927 344 522 9.67E-26 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV2_0183 a849092a395400076bc8b2ddb008da5b 622 Gene3D G3DSA:3.40.140.10 343 536 6.7E-41 T 14-10-2018 VV2_0183 a849092a395400076bc8b2ddb008da5b 622 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 343 512 9.7E-18 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VV1_2547 620efe522024eb30347b0b7a55113282 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 6.9E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV1_2547 620efe522024eb30347b0b7a55113282 95 Gene3D G3DSA:3.30.2310.20 1 93 5.0E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VV2_1582 62a4c0d3fee429c972b412a5cc1617c5 466 SUPERFAMILY SSF51735 142 269 7.48E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1582 62a4c0d3fee429c972b412a5cc1617c5 466 Gene3D G3DSA:3.40.50.720 141 264 4.7E-13 T 14-10-2018 VV2_1582 62a4c0d3fee429c972b412a5cc1617c5 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 466 5.6E-171 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VV2_1582 62a4c0d3fee429c972b412a5cc1617c5 466 Pfam PF02397 Bacterial sugar transferase 276 458 1.2E-66 T 14-10-2018 IPR003362 Bacterial sugar transferase VV2_1582 62a4c0d3fee429c972b412a5cc1617c5 466 Pfam PF13727 CoA-binding domain 63 240 2.8E-38 T 14-10-2018 VV2_1582 62a4c0d3fee429c972b412a5cc1617c5 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 466 7.5E-152 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VV1_0156 3a00c90131c040317291dff445467d5c 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 7.4E-186 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VV1_0156 3a00c90131c040317291dff445467d5c 402 SUPERFAMILY SSF52777 172 401 2.22E-89 T 14-10-2018 VV1_0156 3a00c90131c040317291dff445467d5c 402 Gene3D G3DSA:2.40.50.100 1 78 6.2E-22 T 14-10-2018 VV1_0156 3a00c90131c040317291dff445467d5c 402 Gene3D G3DSA:3.30.559.10 170 402 1.9E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV1_0156 3a00c90131c040317291dff445467d5c 402 Pfam PF00364 Biotin-requiring enzyme 4 76 1.0E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment VV1_0156 3a00c90131c040317291dff445467d5c 402 Gene3D G3DSA:4.10.320.10 102 152 2.0E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VV1_0156 3a00c90131c040317291dff445467d5c 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 2.6E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VV1_0156 3a00c90131c040317291dff445467d5c 402 Pfam PF02817 e3 binding domain 113 146 2.3E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VV1_0156 3a00c90131c040317291dff445467d5c 402 SUPERFAMILY SSF47005 106 149 1.23E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VV1_0156 3a00c90131c040317291dff445467d5c 402 SUPERFAMILY SSF51230 1 96 5.5E-24 T 14-10-2018 IPR011053 Single hybrid motif VV1_0156 3a00c90131c040317291dff445467d5c 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 170 1.1E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Gene3D G3DSA:3.40.50.970 366 574 4.5E-66 T 14-10-2018 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 2.0E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 SUPERFAMILY SSF52467 191 364 5.07E-64 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 1.6E-273 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 1.4E-47 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 SUPERFAMILY SSF52518 373 567 5.33E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Gene3D G3DSA:3.40.50.970 1 182 8.2E-74 T 14-10-2018 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 Gene3D G3DSA:3.40.50.1220 192 362 3.3E-61 T 14-10-2018 VV1_0648 faf33e74fc80c1a9f0dd62f4a2c92b7f 574 SUPERFAMILY SSF52518 2 180 3.07E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV2_1650 96d419bdac7d0de21f8a4c77c5b6e9ef 132 Pfam PF02566 OsmC-like protein 29 127 7.3E-16 T 14-10-2018 IPR003718 OsmC/Ohr family VV2_1650 96d419bdac7d0de21f8a4c77c5b6e9ef 132 Gene3D G3DSA:3.30.300.20 35 132 7.1E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta VV2_1650 96d419bdac7d0de21f8a4c77c5b6e9ef 132 SUPERFAMILY SSF82784 1 131 1.44E-38 T 14-10-2018 IPR036102 OsmC/Ohr superfamily VV2_1650 96d419bdac7d0de21f8a4c77c5b6e9ef 132 Gene3D G3DSA:2.20.25.10 1 34 7.1E-20 T 14-10-2018 VV1_0724 c43f5ff84f536f24de6f8b570ead3f50 574 Gene3D G3DSA:3.30.70.1450 206 279 2.7E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_0724 c43f5ff84f536f24de6f8b570ead3f50 574 Gene3D G3DSA:3.30.70.1450 289 360 4.5E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_0724 c43f5ff84f536f24de6f8b570ead3f50 574 Pfam PF03600 Citrate transporter 32 518 3.8E-25 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VV1_0724 c43f5ff84f536f24de6f8b570ead3f50 574 SUPERFAMILY SSF116726 206 283 1.31E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_0724 c43f5ff84f536f24de6f8b570ead3f50 574 SUPERFAMILY SSF116726 290 349 1.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VV1_0724 c43f5ff84f536f24de6f8b570ead3f50 574 Pfam PF02080 TrkA-C domain 293 349 1.3E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV1_0724 c43f5ff84f536f24de6f8b570ead3f50 574 Pfam PF02080 TrkA-C domain 209 276 8.6E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VV1_0732 00916f1335e48b9abbb3a0e3a9b0b2b9 187 Pfam PF08525 Opacity-associated protein A N-terminal motif 36 63 8.6E-9 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal VV1_0732 00916f1335e48b9abbb3a0e3a9b0b2b9 187 Pfam PF04225 Opacity-associated protein A LysM-like domain 103 187 8.2E-39 T 14-10-2018 IPR007340 Opacity-associated protein A VV1_0732 00916f1335e48b9abbb3a0e3a9b0b2b9 187 Gene3D G3DSA:3.10.450.350 92 185 3.6E-13 T 14-10-2018 VV1_1483 00c07a22a3bbed44d424c79aeff257a2 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 3.1E-114 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VV1_1483 00c07a22a3bbed44d424c79aeff257a2 443 Pfam PF02378 Phosphotransferase system, EIIC 32 351 5.8E-66 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV1_1483 00c07a22a3bbed44d424c79aeff257a2 443 PIRSF PIRSF006351 4 434 1.2E-148 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VV2_0747 b15e6dbf9d8df7f2cc74e7fadbec8212 219 Gene3D G3DSA:2.30.30.40 60 130 1.2E-5 T 14-10-2018 VV2_0747 b15e6dbf9d8df7f2cc74e7fadbec8212 219 Pfam PF08239 Bacterial SH3 domain 70 120 1.6E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VV2_1396 0fd07e1aa9d5cb6d39abdecb62b9626c 251 SUPERFAMILY SSF46894 178 246 6.8E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1396 0fd07e1aa9d5cb6d39abdecb62b9626c 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 185 239 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1396 0fd07e1aa9d5cb6d39abdecb62b9626c 251 Gene3D G3DSA:1.10.10.10 140 248 5.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1396 0fd07e1aa9d5cb6d39abdecb62b9626c 251 SMART SM00421 184 241 1.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1396 0fd07e1aa9d5cb6d39abdecb62b9626c 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 217 1.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1396 0fd07e1aa9d5cb6d39abdecb62b9626c 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 229 1.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1396 0fd07e1aa9d5cb6d39abdecb62b9626c 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 201 1.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 SMART SM00342 201 285 8.2E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 Gene3D G3DSA:1.10.10.60 181 289 1.6E-28 T 14-10-2018 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 SUPERFAMILY SSF46689 240 287 2.58E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 SUPERFAMILY SSF51215 27 171 1.31E-15 T 14-10-2018 IPR037923 Transcription regulator HTH-like VV2_1302 747c45cfa128b31da081d5a1131807ca 289 Gene3D G3DSA:2.60.120.10 3 90 1.0E-10 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1302 747c45cfa128b31da081d5a1131807ca 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 4.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 4.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 SUPERFAMILY SSF46689 186 235 7.89E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 Pfam PF12833 Helix-turn-helix domain 207 286 2.9E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1302 747c45cfa128b31da081d5a1131807ca 289 Pfam PF02311 AraC-like ligand binding domain 22 164 6.5E-8 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 9.7E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.129 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.4E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.10.20.30 34 125 8.7E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.8E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 9.3E-228 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:3.40.50.80 275 393 4.2E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF52343 258 402 2.62E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF54292 36 124 6.56E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 SUPERFAMILY SSF63380 105 272 1.7E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 Gene3D G3DSA:2.40.30.10 126 264 2.7E-50 T 14-10-2018 VV1_1826 8338632259edc8db2aa6e332d7bc94ea 407 PIRSF PIRSF000044 1 407 2.5E-217 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VV1_0163 b64883e52e1c97e1c4d42e42d4e8eeb2 252 SUPERFAMILY SSF102705 1 251 4.71E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VV1_0163 b64883e52e1c97e1c4d42e42d4e8eeb2 252 Gene3D G3DSA:3.40.1390.30 97 223 1.2E-81 T 14-10-2018 VV1_0163 b64883e52e1c97e1c4d42e42d4e8eeb2 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 3.2E-68 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VV1_0163 b64883e52e1c97e1c4d42e42d4e8eeb2 252 Gene3D G3DSA:3.40.1390.30 14 237 1.2E-81 T 14-10-2018 VV1_0163 b64883e52e1c97e1c4d42e42d4e8eeb2 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 2.8E-59 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VV1_1514 0fc62c55139b9efeae00918bf75a3b08 90 Gene3D G3DSA:1.10.3880.10 1 90 2.1E-39 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VV1_1514 0fc62c55139b9efeae00918bf75a3b08 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV1_1514 0fc62c55139b9efeae00918bf75a3b08 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.3E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV1_1514 0fc62c55139b9efeae00918bf75a3b08 90 SUPERFAMILY SSF111148 1 89 7.98E-41 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VV1_1514 0fc62c55139b9efeae00918bf75a3b08 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.501 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV1_1514 0fc62c55139b9efeae00918bf75a3b08 90 PIRSF PIRSF029827 1 90 1.9E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 14-10-2018 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2400 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 14-10-2018 VV1_0884 910f0e2f51bab768acc4e27ca7beea01 144 SUPERFAMILY SSF69500 2 143 1.11E-52 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VV1_0884 910f0e2f51bab768acc4e27ca7beea01 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.422 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VV1_0884 910f0e2f51bab768acc4e27ca7beea01 144 Gene3D G3DSA:3.50.80.10 1 144 6.5E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VV1_0884 910f0e2f51bab768acc4e27ca7beea01 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 2.7E-63 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VV1_0884 910f0e2f51bab768acc4e27ca7beea01 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 2.1E-50 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 1.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 SMART SM00871 142 292 4.7E-21 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 SUPERFAMILY SSF46689 65 113 1.57E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 SUPERFAMILY SSF55136 143 291 1.48E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 Pfam PF06445 GyrI-like small molecule binding domain 143 291 1.3E-30 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 Pfam PF12833 Helix-turn-helix domain 34 112 2.2E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 Gene3D G3DSA:1.10.10.60 62 115 1.5E-16 T 14-10-2018 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 SUPERFAMILY SSF46689 11 62 8.96E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 Gene3D G3DSA:3.20.80.10 143 292 4.3E-28 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 Gene3D G3DSA:1.10.10.60 5 61 6.3E-15 T 14-10-2018 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 65 108 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_1661 11b1c4aef5f7c7e4565c748cde159ab5 294 SMART SM00342 28 112 1.5E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 SUPERFAMILY SSF56784 9 229 1.25E-60 T 14-10-2018 IPR036412 HAD-like superfamily VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 Gene3D G3DSA:3.40.50.1000 14 221 1.5E-64 T 14-10-2018 IPR023214 HAD superfamily VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 93 198 9.8E-15 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 14 228 2.2E-59 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 198 1.2E-36 T 14-10-2018 VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 11 230 35.366 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 199 6.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 Gene3D G3DSA:1.10.150.240 26 99 1.5E-64 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VV1_1306 8077b41b0496b89d46a9aa7a1cddb1da 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 194 4.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_0081 28014afaeed8d2f91fa127a8f1c90b88 268 Gene3D G3DSA:1.10.260.40 5 70 2.4E-8 T 14-10-2018 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 Gene3D G3DSA:3.40.50.300 1 172 9.1E-56 T 14-10-2018 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.411 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 7 22 5.2E-29 T 14-10-2018 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 77 86 5.2E-29 T 14-10-2018 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 31 44 5.2E-29 T 14-10-2018 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 98 115 5.2E-29 T 14-10-2018 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 PRINTS PR01100 Shikimate kinase family signature 59 67 5.2E-29 T 14-10-2018 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 Pfam PF01202 Shikimate kinase 13 169 2.6E-56 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 SUPERFAMILY SSF52540 4 169 4.26E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1382 16bec5c746d63037086bc4b6f7de01a3 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VV1_1524 2400fff58729327dba310c18db8251de 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VV1_1524 2400fff58729327dba310c18db8251de 272 Gene3D G3DSA:3.40.50.720 2 164 9.4E-51 T 14-10-2018 VV1_1524 2400fff58729327dba310c18db8251de 272 PIRSF PIRSF000193 3 270 3.2E-76 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VV1_1524 2400fff58729327dba310c18db8251de 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 4.2E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VV1_1524 2400fff58729327dba310c18db8251de 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 3.2E-25 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VV1_1524 2400fff58729327dba310c18db8251de 272 Gene3D G3DSA:1.10.3730.10 165 272 6.7E-35 T 14-10-2018 VV1_1524 2400fff58729327dba310c18db8251de 272 SUPERFAMILY SSF48179 162 270 1.07E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_1524 2400fff58729327dba310c18db8251de 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.6E-30 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VV1_1524 2400fff58729327dba310c18db8251de 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.427 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VV1_1524 2400fff58729327dba310c18db8251de 272 SUPERFAMILY SSF51735 4 161 1.42E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1641 74390686fc18b1c544ad76886a977c22 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 7.1E-25 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VV2_1641 74390686fc18b1c544ad76886a977c22 402 Pfam PF07670 Nucleoside recognition 90 185 2.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV2_1641 74390686fc18b1c544ad76886a977c22 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 2.9E-139 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VV2_1641 74390686fc18b1c544ad76886a977c22 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.5E-71 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 10 366 8.9E-172 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 211.741 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 Gene3D G3DSA:3.90.1150.10 12 357 1.5E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 PIRSF PIRSF000524 2 369 6.5E-60 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 Pfam PF00266 Aminotransferase class-V 40 318 4.8E-31 T 14-10-2018 IPR000192 Aminotransferase class V domain VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 SUPERFAMILY SSF53383 7 366 6.74E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 6 369 5.9E-203 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VV2_1664 a7ea88746f31f4cd27ec05d6a083fef6 371 Gene3D G3DSA:3.40.640.10 20 266 1.5E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_0620 b34837a3877cf4c73fc7870601c642e2 203 Pfam PF08239 Bacterial SH3 domain 32 82 7.2E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VV1_0620 b34837a3877cf4c73fc7870601c642e2 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 2.9E-53 T 14-10-2018 IPR016476 SH3 domain protein VV1_0620 b34837a3877cf4c73fc7870601c642e2 203 SMART SM00287 20 86 1.2E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VV1_0620 b34837a3877cf4c73fc7870601c642e2 203 PIRSF PIRSF006158 1 203 8.5E-73 T 14-10-2018 IPR016476 SH3 domain protein VV1_0620 b34837a3877cf4c73fc7870601c642e2 203 Gene3D G3DSA:2.30.30.40 30 86 1.3E-7 T 14-10-2018 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 58 492 2.3E-122 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 Pfam PF01235 Sodium:alanine symporter family 96 500 1.9E-133 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 355 373 6.2E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 237 255 6.2E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 132 154 6.2E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 265 284 6.2E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 400 422 6.2E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_2301 fa9eb61698c43be25937c3738ddd8a7b 515 PRINTS PR00175 Sodium/alanine symporter signature 461 481 6.2E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0083 8dfd2ad9563b9894dfcd00fa3b9800cf 108 SMART SM00530 10 66 2.3E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_0083 8dfd2ad9563b9894dfcd00fa3b9800cf 108 Gene3D G3DSA:1.10.260.40 7 107 4.7E-15 T 14-10-2018 VV1_0083 8dfd2ad9563b9894dfcd00fa3b9800cf 108 Pfam PF13560 Helix-turn-helix domain 9 63 4.7E-12 T 14-10-2018 VV1_0083 8dfd2ad9563b9894dfcd00fa3b9800cf 108 SUPERFAMILY SSF47413 2 74 2.04E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_0896 7b3d2229eb64d49389aa8d2146bef740 261 Gene3D G3DSA:3.40.190.10 121 215 1.7E-12 T 14-10-2018 VV2_0896 7b3d2229eb64d49389aa8d2146bef740 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 257 2.3E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0896 7b3d2229eb64d49389aa8d2146bef740 261 SUPERFAMILY SSF53850 22 257 9.87E-24 T 14-10-2018 VV2_0896 7b3d2229eb64d49389aa8d2146bef740 261 Gene3D G3DSA:3.40.190.10 36 246 1.7E-12 T 14-10-2018 VV1_2280 1eb4fef4b28730b5d08a1139b8cfdcdd 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 1.1E-19 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 VV1_2280 1eb4fef4b28730b5d08a1139b8cfdcdd 403 Gene3D G3DSA:1.10.3210.10 10 327 1.6E-67 T 14-10-2018 VV1_2280 1eb4fef4b28730b5d08a1139b8cfdcdd 403 SMART SM00471 161 297 1.3E-8 T 14-10-2018 IPR003607 HD/PDEase domain VV1_2280 1eb4fef4b28730b5d08a1139b8cfdcdd 403 Pfam PF01966 HD domain 166 287 2.7E-14 T 14-10-2018 IPR006674 HD domain VV1_2280 1eb4fef4b28730b5d08a1139b8cfdcdd 403 SUPERFAMILY SSF109604 156 327 1.52E-31 T 14-10-2018 VV1_1998 d49f707f383e829f6dad93dc1e5b06a2 291 SUPERFAMILY SSF53850 89 287 1.38E-37 T 14-10-2018 VV1_1998 d49f707f383e829f6dad93dc1e5b06a2 291 Pfam PF03466 LysR substrate binding domain 88 286 1.6E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1998 d49f707f383e829f6dad93dc1e5b06a2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.8E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1998 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:3.40.190.290 90 290 7.0E-73 T 14-10-2018 VV1_1998 d49f707f383e829f6dad93dc1e5b06a2 291 Gene3D G3DSA:1.10.10.10 1 89 1.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1998 d49f707f383e829f6dad93dc1e5b06a2 291 SUPERFAMILY SSF46785 1 83 1.04E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1036 26e149818aaa382554ba22165dd437af 201 PIRSF PIRSF001488 1 201 2.2E-70 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VV1_1036 26e149818aaa382554ba22165dd437af 201 SUPERFAMILY SSF52833 22 199 9.13E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_1036 26e149818aaa382554ba22165dd437af 201 Gene3D G3DSA:3.40.30.10 18 200 6.6E-54 T 14-10-2018 VV1_1036 26e149818aaa382554ba22165dd437af 201 Pfam PF01323 DSBA-like thioredoxin domain 42 189 2.6E-29 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VV1_1036 26e149818aaa382554ba22165dd437af 201 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV2_1295 6b51529b62a7711757ccc86d5c449eab 328 SUPERFAMILY SSF52540 10 259 1.77E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1295 6b51529b62a7711757ccc86d5c449eab 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 3.1E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_1295 6b51529b62a7711757ccc86d5c449eab 328 SMART SM00382 43 238 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1295 6b51529b62a7711757ccc86d5c449eab 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 1.3E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_1295 6b51529b62a7711757ccc86d5c449eab 328 Pfam PF00005 ABC transporter 35 188 2.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1295 6b51529b62a7711757ccc86d5c449eab 328 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1295 6b51529b62a7711757ccc86d5c449eab 328 Gene3D G3DSA:3.40.50.300 8 327 4.8E-85 T 14-10-2018 VV1_2144 605a2798b8fb4149162b81d1844492cb 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 237 51.49 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VV1_2144 605a2798b8fb4149162b81d1844492cb 240 Pfam PF04288 MukE-like family 10 234 1.6E-118 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VV1_2144 605a2798b8fb4149162b81d1844492cb 240 Gene3D G3DSA:1.10.10.2250 1 78 1.2E-35 T 14-10-2018 VV1_2144 605a2798b8fb4149162b81d1844492cb 240 Gene3D G3DSA:1.10.10.2260 88 194 3.9E-49 T 14-10-2018 VV1_3247 c11c7287b6058480bb4ba69d4d2853f7 126 Pfam PF11665 Protein of unknown function (DUF3265) 1 19 4.0E-7 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 VV1_0247 c13a2cc58d3021e108d5a6ed93549836 159 Gene3D G3DSA:3.90.960.10 1 157 3.2E-57 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VV1_0247 c13a2cc58d3021e108d5a6ed93549836 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 6.1E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV1_0247 c13a2cc58d3021e108d5a6ed93549836 159 PIRSF PIRSF006181 1 159 1.4E-52 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VV1_0247 c13a2cc58d3021e108d5a6ed93549836 159 SUPERFAMILY SSF55826 2 156 2.49E-42 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VV1_0247 c13a2cc58d3021e108d5a6ed93549836 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.0E-59 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Gene3D G3DSA:2.20.25.90 5 50 2.0E-11 T 14-10-2018 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Gene3D G3DSA:1.10.10.1100 824 878 4.9E-13 T 14-10-2018 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Pfam PF04324 BFD-like [2Fe-2S] binding domain 824 873 2.0E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 50 1.0E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Pfam PF01568 Molydopterin dinucleotide binding domain 580 690 5.2E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Gene3D G3DSA:3.40.50.740 63 535 3.1E-160 T 14-10-2018 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 24 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 PIRSF PIRSF036643 3 704 7.9E-128 T 14-10-2018 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Gene3D G3DSA:3.40.228.10 128 335 3.1E-160 T 14-10-2018 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Pfam PF00384 Molybdopterin oxidoreductase 64 480 5.1E-76 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 SMART SM00926 5 51 8.2E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 Gene3D G3DSA:2.40.40.20 578 701 8.9E-24 T 14-10-2018 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 SUPERFAMILY SSF53706 5 562 2.09E-172 T 14-10-2018 VV2_0398 669b8ad5192f7e1518e7a7bcf03486a7 881 SUPERFAMILY SSF50692 580 699 7.91E-25 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.743 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.4E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 Pfam PF01678 Diaminopimelate epimerase 5 125 9.7E-33 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 Gene3D G3DSA:3.10.310.10 117 263 4.8E-107 T 14-10-2018 VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.0E-101 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 Gene3D G3DSA:3.10.310.10 5 272 4.8E-107 T 14-10-2018 VV1_1127 53dc64b050e1f907dedfda4d55638e89 276 SUPERFAMILY SSF54506 2 274 4.29E-53 T 14-10-2018 VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 Gene3D G3DSA:3.40.50.720 119 239 3.0E-84 T 14-10-2018 VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.9E-24 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 SUPERFAMILY SSF53223 6 105 8.63E-32 T 14-10-2018 VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.613 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 Gene3D G3DSA:3.40.50.10860 8 258 3.0E-84 T 14-10-2018 VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 2.3E-14 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 3.0E-87 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VV1_1057 63dc9b5ecff5d2ed86371d2775e7ff17 277 SUPERFAMILY SSF51735 106 273 8.98E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1258 6fa3a5b9d27aa6efeb30967c5b7975fa 401 Gene3D G3DSA:2.10.10.20 358 401 2.2E-18 T 14-10-2018 VV2_1258 6fa3a5b9d27aa6efeb30967c5b7975fa 401 SUPERFAMILY SSF51055 355 400 1.57E-12 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV2_1258 6fa3a5b9d27aa6efeb30967c5b7975fa 401 Gene3D G3DSA:2.70.50.50 34 227 5.3E-63 T 14-10-2018 VV2_1258 6fa3a5b9d27aa6efeb30967c5b7975fa 401 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 34 222 1.8E-35 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VV2_1258 6fa3a5b9d27aa6efeb30967c5b7975fa 401 SUPERFAMILY SSF81296 34 224 6.02E-48 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1258 6fa3a5b9d27aa6efeb30967c5b7975fa 401 SMART SM00495 358 401 7.4E-8 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VV1_1225 dc7b21e3ab7f66e21a65fe5c551205c0 230 Pfam PF07356 Protein of unknown function (DUF1481) 32 225 4.1E-59 T 14-10-2018 IPR010858 Protein of unknown function DUF1481 VV1_1225 dc7b21e3ab7f66e21a65fe5c551205c0 230 PIRSF PIRSF028160 1 230 2.0E-122 T 14-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 Gene3D G3DSA:3.30.470.30 51 151 1.0E-53 T 14-10-2018 VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 Gene3D G3DSA:2.40.50.140 198 280 1.9E-8 T 14-10-2018 VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 SUPERFAMILY SSF56091 27 198 1.61E-38 T 14-10-2018 VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 Pfam PF14743 DNA ligase OB-like domain 212 277 2.5E-26 T 14-10-2018 IPR029319 DNA ligase, OB-like domain VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 Gene3D G3DSA:3.30.1490.70 31 190 1.0E-53 T 14-10-2018 VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 Pfam PF01068 ATP dependent DNA ligase domain 41 198 2.2E-7 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 VV1_2657 af6d3407df28f6a4e42513ceffed47dc 280 SUPERFAMILY SSF50249 174 277 2.11E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1823 08cdfd1567764b6cdaf28df3ab699489 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 252 35.565 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VV1_1823 08cdfd1567764b6cdaf28df3ab699489 255 Pfam PF04205 FMN-binding domain 142 237 1.4E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VV1_1823 08cdfd1567764b6cdaf28df3ab699489 255 SMART SM00900 142 240 1.0E-32 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VV1_1823 08cdfd1567764b6cdaf28df3ab699489 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 4 248 6.2E-96 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VV1_1823 08cdfd1567764b6cdaf28df3ab699489 255 PIRSF PIRSF009437 1 255 1.3E-104 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 Pfam PF02142 MGS-like domain 19 132 8.2E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 SMART SM00851 19 132 1.4E-61 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 6.0E-119 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 PIRSF PIRSF000414 1 530 5.9E-228 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.865 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 Gene3D G3DSA:3.40.140.20 394 530 1.5E-60 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 Gene3D G3DSA:3.40.140.20 220 375 2.7E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 6.3E-261 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 SUPERFAMILY SSF53927 222 530 7.72E-131 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 SMART SM00798 137 462 1.2E-217 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 SUPERFAMILY SSF52335 7 197 9.81E-72 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VV1_1227 13e76d480745e6a802aad08c506bc1bd 530 Gene3D G3DSA:3.40.50.1380 1 200 1.7E-87 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 Gene3D G3DSA:3.40.50.300 1 242 3.1E-53 T 14-10-2018 VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 3.8E-136 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 SUPERFAMILY SSF50331 237 359 1.04E-15 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 SMART SM00382 25 208 6.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 SUPERFAMILY SSF52540 11 237 1.45E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 Pfam PF03459 TOBE domain 293 359 1.0E-12 T 14-10-2018 IPR005116 Transport-associated OB, type 1 VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 Gene3D G3DSA:2.40.50.100 292 360 3.8E-13 T 14-10-2018 VV2_0327 1d07e9d0a6de623e9f5353d6bab7605e 368 Pfam PF00005 ABC transporter 18 158 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0615 631cb01b8e7c2cc7f0f20664f1565dc0 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 201 384 1.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0615 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 2.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_0615 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 2.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_0615 631cb01b8e7c2cc7f0f20664f1565dc0 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 2.6E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_0615 631cb01b8e7c2cc7f0f20664f1565dc0 418 SMART SM00283 156 417 1.1E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0615 631cb01b8e7c2cc7f0f20664f1565dc0 418 Gene3D G3DSA:1.10.287.950 89 418 1.4E-68 T 14-10-2018 VV1_0615 631cb01b8e7c2cc7f0f20664f1565dc0 418 SUPERFAMILY SSF58104 109 418 9.42E-76 T 14-10-2018 VV2_1412 58449d72008d52be5cfffdc1fdf4e954 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.4E-34 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VV2_1412 58449d72008d52be5cfffdc1fdf4e954 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VV2_1412 58449d72008d52be5cfffdc1fdf4e954 118 Gene3D G3DSA:1.10.3830.10 3 118 4.8E-39 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VV1_2892 dff5c822ba6199f06b6eab45ad648008 329 Gene3D G3DSA:2.40.160.10 41 329 9.9E-17 T 14-10-2018 IPR023614 Porin domain superfamily VV1_2892 dff5c822ba6199f06b6eab45ad648008 329 SUPERFAMILY SSF56935 44 329 3.66E-20 T 14-10-2018 VV1_2892 dff5c822ba6199f06b6eab45ad648008 329 Pfam PF13609 Gram-negative porin 8 313 2.7E-25 T 14-10-2018 VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 2.4E-67 T 14-10-2018 VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 1.6E-19 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 Gene3D G3DSA:3.30.1240.10 82 195 5.8E-61 T 14-10-2018 VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 5.9E-55 T 14-10-2018 IPR000150 Cof family GO:0016787 VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 14-10-2018 VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 Gene3D G3DSA:3.40.50.1000 3 267 5.8E-61 T 14-10-2018 IPR023214 HAD superfamily VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 SUPERFAMILY SSF56784 1 270 4.78E-64 T 14-10-2018 IPR036412 HAD-like superfamily VV2_1083 cf4fd2ea4e31ddff31a8859cd28c19a8 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 VV1_1805 589a877099be32a782933a45296006ae 541 SMART SM00283 277 538 1.8E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1805 589a877099be32a782933a45296006ae 541 Gene3D G3DSA:1.10.287.950 241 538 2.1E-63 T 14-10-2018 VV1_1805 589a877099be32a782933a45296006ae 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 504 6.9E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1805 589a877099be32a782933a45296006ae 541 SUPERFAMILY SSF58104 237 539 1.22E-67 T 14-10-2018 VV1_1805 589a877099be32a782933a45296006ae 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 2.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1805 589a877099be32a782933a45296006ae 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 2.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1805 589a877099be32a782933a45296006ae 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 2.2E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_3222 b0c7ce3e53ab54ad553142db2827352c 237 Gene3D G3DSA:3.40.630.70 64 236 3.3E-58 T 14-10-2018 VV1_3222 b0c7ce3e53ab54ad553142db2827352c 237 Gene3D G3DSA:2.30.210.20 4 63 5.6E-27 T 14-10-2018 VV1_3222 b0c7ce3e53ab54ad553142db2827352c 237 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 8.3E-66 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VV1_3222 b0c7ce3e53ab54ad553142db2827352c 237 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 237 88.863 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VV1_3222 b0c7ce3e53ab54ad553142db2827352c 237 SUPERFAMILY SSF55729 4 232 5.19E-86 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_3222 b0c7ce3e53ab54ad553142db2827352c 237 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 221 7.8E-73 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VV1_1897 9893f94b78209468f7797bbb410d013a 191 SUPERFAMILY SSF53697 1 189 1.48E-52 T 14-10-2018 VV1_1897 9893f94b78209468f7797bbb410d013a 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.794 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VV1_1897 9893f94b78209468f7797bbb410d013a 191 Gene3D G3DSA:3.40.50.10490 1 191 5.1E-72 T 14-10-2018 VV1_1897 9893f94b78209468f7797bbb410d013a 191 Pfam PF13580 SIS domain 25 146 1.2E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV1_1897 9893f94b78209468f7797bbb410d013a 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.9E-82 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VV1_1378 4783a5c3ec5ce2249f42795e14863dd9 196 Pfam PF05137 Fimbrial assembly protein (PilN) 102 177 7.0E-15 T 14-10-2018 IPR007813 Fimbrial assembly PilN VV1_2494 397ae99f83748178dfba8054de4daaa7 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 1.8E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_2494 397ae99f83748178dfba8054de4daaa7 122 Gene3D G3DSA:3.10.180.10 1 122 3.8E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2494 397ae99f83748178dfba8054de4daaa7 122 SUPERFAMILY SSF54593 3 121 4.26E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_1008 64329c0f4a7b293c7b7e57d5dabaa1b7 378 Gene3D G3DSA:2.40.30.170 45 307 4.4E-52 T 14-10-2018 VV2_1008 64329c0f4a7b293c7b7e57d5dabaa1b7 378 Gene3D G3DSA:2.40.50.100 56 216 4.4E-52 T 14-10-2018 VV2_1008 64329c0f4a7b293c7b7e57d5dabaa1b7 378 Gene3D G3DSA:2.40.420.20 40 367 4.4E-52 T 14-10-2018 VV2_1008 64329c0f4a7b293c7b7e57d5dabaa1b7 378 SUPERFAMILY SSF111369 49 251 9.02E-15 T 14-10-2018 VV2_1008 64329c0f4a7b293c7b7e57d5dabaa1b7 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 367 1.6E-33 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV2_1008 64329c0f4a7b293c7b7e57d5dabaa1b7 378 Gene3D G3DSA:1.10.287.470 90 176 4.4E-52 T 14-10-2018 VV2_1008 64329c0f4a7b293c7b7e57d5dabaa1b7 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.4E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_1713 1918f0024ee746ee0d9ad302ee1cd3c4 337 Pfam PF01136 Peptidase family U32 75 336 1.2E-69 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VV1_1713 1918f0024ee746ee0d9ad302ee1cd3c4 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VV2_1261 7c5eb0f0b05a3a84927e3a32ce68c414 200 Gene3D G3DSA:3.40.50.1000 3 190 3.1E-31 T 14-10-2018 IPR023214 HAD superfamily VV2_1261 7c5eb0f0b05a3a84927e3a32ce68c414 200 Gene3D G3DSA:1.20.1440.100 15 87 3.1E-31 T 14-10-2018 VV2_1261 7c5eb0f0b05a3a84927e3a32ce68c414 200 SUPERFAMILY SSF56784 2 187 3.4E-21 T 14-10-2018 IPR036412 HAD-like superfamily VV2_1261 7c5eb0f0b05a3a84927e3a32ce68c414 200 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 190 5.4E-37 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VV2_1261 7c5eb0f0b05a3a84927e3a32ce68c414 200 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 1.2E-25 T 14-10-2018 VV2_1261 7c5eb0f0b05a3a84927e3a32ce68c414 200 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 1.0E-30 T 14-10-2018 VV2_0582 4bcc4d16a840ac6de921e1b348d115e3 292 SUPERFAMILY SSF103481 191 288 1.19E-9 T 14-10-2018 VV2_0582 4bcc4d16a840ac6de921e1b348d115e3 292 Pfam PF00892 EamA-like transporter family 155 284 3.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0582 4bcc4d16a840ac6de921e1b348d115e3 292 Pfam PF00892 EamA-like transporter family 9 144 3.1E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0582 4bcc4d16a840ac6de921e1b348d115e3 292 SUPERFAMILY SSF103481 47 145 5.75E-9 T 14-10-2018 VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 SUPERFAMILY SSF54197 181 349 2.72E-55 T 14-10-2018 IPR036265 HIT-like superfamily VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 4.0E-65 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 PIRSF PIRSF000808 2 345 7.6E-125 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 5.9E-185 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 Gene3D G3DSA:3.30.428.10 46 177 1.8E-55 T 14-10-2018 IPR036265 HIT-like superfamily VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 Gene3D G3DSA:3.30.428.10 178 351 1.2E-72 T 14-10-2018 IPR036265 HIT-like superfamily VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 SUPERFAMILY SSF54197 6 179 1.8E-73 T 14-10-2018 IPR036265 HIT-like superfamily VV1_1771 8785ef4c34017f9c7bfe8b1d12d74975 355 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 2.9E-67 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV2_0212 2ea8af1191350256d52ff50b7438b80e 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_0212 2ea8af1191350256d52ff50b7438b80e 292 SUPERFAMILY SSF46689 246 290 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0212 2ea8af1191350256d52ff50b7438b80e 292 SUPERFAMILY SSF46689 193 244 8.48E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0212 2ea8af1191350256d52ff50b7438b80e 292 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 181 1.7E-33 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VV2_0212 2ea8af1191350256d52ff50b7438b80e 292 Gene3D G3DSA:1.10.10.60 189 292 1.6E-26 T 14-10-2018 VV2_0212 2ea8af1191350256d52ff50b7438b80e 292 Pfam PF12833 Helix-turn-helix domain 216 290 1.4E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0212 2ea8af1191350256d52ff50b7438b80e 292 SMART SM00342 210 292 3.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 Gene3D G3DSA:3.40.50.720 1 239 1.7E-78 T 14-10-2018 VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 SUPERFAMILY SSF51735 3 224 4.56E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 Pfam PF00106 short chain dehydrogenase 3 189 2.5E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1418 03151436d77e90f8c7c05cc41a23042a 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_0785 7e426bb4a5a621ec1c07302db0478ca8 45 SUPERFAMILY SSF158446 2 41 7.19E-6 T 14-10-2018 IPR036583 23S rRNA-intervening sequence superfamily VV2_0351 b032a47ac1c5d13845dc505210d81532 384 Gene3D G3DSA:1.20.1250.20 7 192 1.2E-16 T 14-10-2018 VV2_0351 b032a47ac1c5d13845dc505210d81532 384 SUPERFAMILY SSF103473 11 377 2.88E-38 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0351 b032a47ac1c5d13845dc505210d81532 384 Gene3D G3DSA:1.20.1250.20 202 379 8.1E-12 T 14-10-2018 VV2_0351 b032a47ac1c5d13845dc505210d81532 384 Pfam PF07690 Major Facilitator Superfamily 16 341 1.2E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 Gene3D G3DSA:1.20.1560.10 142 454 1.0E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 Gene3D G3DSA:3.40.50.300 460 703 2.0E-74 T 14-10-2018 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 Gene3D G3DSA:3.90.70.10 1 126 5.3E-37 T 14-10-2018 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 SUPERFAMILY SSF90123 142 452 2.09E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 SUPERFAMILY SSF52540 459 693 2.15E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 Pfam PF00664 ABC transporter transmembrane region 158 417 2.0E-21 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 Pfam PF00005 ABC transporter 487 635 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 SMART SM00382 495 681 5.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1128 3a1d17ec41d202d14cec1a8237e82ca0 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.7E-290 T 14-10-2018 IPR017750 ATPase, type I secretion system VV1_2528 500220481c282787e967fcb264720501 154 SMART SM01022 30 153 1.3E-41 T 14-10-2018 IPR007374 ASCH domain VV1_2528 500220481c282787e967fcb264720501 154 PIRSF PIRSF021320 2 154 5.6E-43 T 14-10-2018 IPR009326 Protein of unknown function DUF984 VV1_2528 500220481c282787e967fcb264720501 154 SUPERFAMILY SSF88697 4 153 5.72E-53 T 14-10-2018 IPR015947 PUA-like superfamily VV1_2528 500220481c282787e967fcb264720501 154 Gene3D G3DSA:3.10.400.10 1 154 1.4E-60 T 14-10-2018 VV1_2528 500220481c282787e967fcb264720501 154 Pfam PF04266 ASCH domain 42 153 5.4E-25 T 14-10-2018 IPR007374 ASCH domain VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 Gene3D G3DSA:3.40.190.10 94 290 1.9E-39 T 14-10-2018 VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 SUPERFAMILY SSF46785 4 86 2.72E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 Gene3D G3DSA:3.40.190.10 169 267 1.9E-39 T 14-10-2018 VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 SUPERFAMILY SSF53850 95 294 3.26E-33 T 14-10-2018 VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 Pfam PF03466 LysR substrate binding domain 99 294 1.5E-19 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0888 2ea5b8237d9b9b4ef4277920e30d2c8e 298 Gene3D G3DSA:1.10.10.10 2 88 6.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 SUPERFAMILY SSF54197 5 177 3.21E-72 T 14-10-2018 IPR036265 HIT-like superfamily VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 152 169 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 177 1.3E-68 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 SUPERFAMILY SSF54197 180 346 4.59E-51 T 14-10-2018 IPR036265 HIT-like superfamily VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 Gene3D G3DSA:3.30.428.10 177 353 1.6E-68 T 14-10-2018 IPR036265 HIT-like superfamily VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 3 347 1.5E-177 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 Gene3D G3DSA:3.30.428.10 45 176 5.5E-55 T 14-10-2018 IPR036265 HIT-like superfamily VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 347 7.8E-63 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV2_1094 d10e8a085f807230b28dbfc57ce751bd 353 PIRSF PIRSF000808 1 343 5.4E-123 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VV2_0967 50574c597b5c1a28267598761a6ccb50 432 Pfam PF00561 alpha/beta hydrolase fold 51 224 7.5E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV2_0967 50574c597b5c1a28267598761a6ccb50 432 SUPERFAMILY SSF53474 33 421 8.31E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0967 50574c597b5c1a28267598761a6ccb50 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 53 61 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VV2_0967 50574c597b5c1a28267598761a6ccb50 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 140 154 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VV2_0967 50574c597b5c1a28267598761a6ccb50 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VV1_0173 74bbf22aa0f21bd64268f3c6bedd72b5 189 Pfam PF00258 Flavodoxin 18 174 1.4E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV1_0173 74bbf22aa0f21bd64268f3c6bedd72b5 189 PIRSF PIRSF038996 13 186 2.5E-64 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VV1_0173 74bbf22aa0f21bd64268f3c6bedd72b5 189 TIGRFAM TIGR01752 flav_long: flavodoxin 16 182 3.3E-69 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VV1_0173 74bbf22aa0f21bd64268f3c6bedd72b5 189 ProSitePatterns PS00201 Flavodoxin signature. 18 34 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VV1_0173 74bbf22aa0f21bd64268f3c6bedd72b5 189 Gene3D G3DSA:3.40.50.360 15 189 5.3E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_0173 74bbf22aa0f21bd64268f3c6bedd72b5 189 SUPERFAMILY SSF52218 16 185 1.71E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1607 2d6e0883c8e1d08e1b5b2858e0e9acb0 210 SUPERFAMILY SSF53955 17 202 5.3E-23 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_1607 2d6e0883c8e1d08e1b5b2858e0e9acb0 210 Gene3D G3DSA:1.10.530.10 47 206 1.2E-13 T 14-10-2018 VV1_1837 a1f9055555845f1e1a3aeed4a227fbfe 222 SUPERFAMILY SSF158682 81 221 2.35E-27 T 14-10-2018 IPR029024 TerB-like VV1_1837 a1f9055555845f1e1a3aeed4a227fbfe 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 3.0E-61 T 14-10-2018 IPR007486 Inner membrane protein YebE VV1_1837 a1f9055555845f1e1a3aeed4a227fbfe 222 Gene3D G3DSA:1.10.3680.10 95 222 3.9E-11 T 14-10-2018 IPR029024 TerB-like VV1_0713 081233d34c5206bd514b2acd4df6d82a 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 37.458 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV1_0713 081233d34c5206bd514b2acd4df6d82a 209 Gene3D G3DSA:3.30.1060.10 3 209 5.3E-89 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV1_0713 081233d34c5206bd514b2acd4df6d82a 209 SUPERFAMILY SSF55068 3 207 5.1E-79 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV1_0713 081233d34c5206bd514b2acd4df6d82a 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 1.7E-67 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV1_0713 081233d34c5206bd514b2acd4df6d82a 209 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 1.4E-65 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VV1_2932 fc403280aa5c28e6e58b865b8f0760bd 418 SUPERFAMILY SSF53335 21 371 2.17E-91 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2932 fc403280aa5c28e6e58b865b8f0760bd 418 PIRSF PIRSF003085 24 418 1.5E-121 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VV1_2932 fc403280aa5c28e6e58b865b8f0760bd 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 143 411 1.4E-84 T 14-10-2018 VV1_2932 fc403280aa5c28e6e58b865b8f0760bd 418 Gene3D G3DSA:3.40.50.150 149 418 1.2E-101 T 14-10-2018 VV1_1237 849f050bf483977582300dffc937e275 650 Gene3D G3DSA:3.30.300.30 519 650 4.3E-32 T 14-10-2018 VV1_1237 849f050bf483977582300dffc937e275 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 4.1E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VV1_1237 849f050bf483977582300dffc937e275 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VV1_1237 849f050bf483977582300dffc937e275 650 SUPERFAMILY SSF56801 10 644 7.06E-185 T 14-10-2018 VV1_1237 849f050bf483977582300dffc937e275 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 8.7E-27 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VV1_1237 849f050bf483977582300dffc937e275 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV1_1237 849f050bf483977582300dffc937e275 650 Pfam PF00501 AMP-binding enzyme 84 523 1.2E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV1_1237 849f050bf483977582300dffc937e275 650 Gene3D G3DSA:3.40.50.12780 50 516 1.7E-105 T 14-10-2018 VV1_1237 849f050bf483977582300dffc937e275 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 53.024 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VV2_0331 e97b32a50ee1624ec188b36c15ecc092 122 SUPERFAMILY SSF101756 19 121 2.22E-22 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VV2_0331 e97b32a50ee1624ec188b36c15ecc092 122 Pfam PF04076 Bacterial OB fold (BOF) protein 49 116 2.3E-10 T 14-10-2018 IPR005220 Bacterial OB-fold VV2_0331 e97b32a50ee1624ec188b36c15ecc092 122 Gene3D G3DSA:2.40.50.200 19 122 4.2E-16 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily VV1_0669 f83fb7878b64486867343c2186e7cd91 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 4.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 4.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.0E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.729 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 Gene3D G3DSA:2.70.210.12 1 158 7.4E-59 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VV1_0669 f83fb7878b64486867343c2186e7cd91 389 PIRSF PIRSF002401 1 374 3.7E-136 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type VV1_0669 f83fb7878b64486867343c2186e7cd91 389 SUPERFAMILY SSF52540 151 341 2.4E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0669 f83fb7878b64486867343c2186e7cd91 389 SUPERFAMILY SSF82051 2 157 2.35E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily VV1_0669 f83fb7878b64486867343c2186e7cd91 389 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.3E-142 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 Gene3D G3DSA:3.40.50.300 159 336 2.6E-52 T 14-10-2018 VV1_0669 f83fb7878b64486867343c2186e7cd91 389 Pfam PF01018 GTP1/OBG 4 156 2.6E-56 T 14-10-2018 IPR006169 GTP1/OBG domain VV2_1233 28b677097ad778e52258836829a974a1 1203 Pfam PF11852 Domain of unknown function (DUF3372) 1030 1201 2.0E-50 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VV2_1233 28b677097ad778e52258836829a974a1 1203 SUPERFAMILY SSF49452 168 278 4.25E-31 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VV2_1233 28b677097ad778e52258836829a974a1 1203 Gene3D G3DSA:2.60.40.1110 28 161 8.8E-26 T 14-10-2018 VV2_1233 28b677097ad778e52258836829a974a1 1203 Gene3D G3DSA:2.60.40.1110 166 277 1.7E-26 T 14-10-2018 VV2_1233 28b677097ad778e52258836829a974a1 1203 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 291 1203 0.0 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 VV2_1233 28b677097ad778e52258836829a974a1 1203 Gene3D G3DSA:2.60.40.1180 1127 1203 1.2E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV2_1233 28b677097ad778e52258836829a974a1 1203 Gene3D G3DSA:3.20.20.80 518 1126 1.5E-201 T 14-10-2018 VV2_1233 28b677097ad778e52258836829a974a1 1203 Gene3D G3DSA:2.60.40.10 409 517 2.2E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1233 28b677097ad778e52258836829a974a1 1203 SUPERFAMILY SSF81296 284 408 9.38E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1233 28b677097ad778e52258836829a974a1 1203 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 418 503 8.3E-14 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VV2_1233 28b677097ad778e52258836829a974a1 1203 SUPERFAMILY SSF49452 14 161 6.87E-27 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VV2_1233 28b677097ad778e52258836829a974a1 1203 Gene3D G3DSA:2.60.40.1130 290 407 1.3E-13 T 14-10-2018 VV2_1233 28b677097ad778e52258836829a974a1 1203 SUPERFAMILY SSF51011 1095 1203 2.37E-27 T 14-10-2018 VV2_1233 28b677097ad778e52258836829a974a1 1203 SUPERFAMILY SSF51445 515 1093 4.02E-130 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1233 28b677097ad778e52258836829a974a1 1203 SUPERFAMILY SSF81296 418 521 3.0E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1233 28b677097ad778e52258836829a974a1 1203 Pfam PF03714 Bacterial pullanase-associated domain 48 161 5.3E-12 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VV2_1233 28b677097ad778e52258836829a974a1 1203 Pfam PF03714 Bacterial pullanase-associated domain 174 278 2.0E-11 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VV1_2538 96e6ff2f82080708269df322633908ae 90 Gene3D G3DSA:1.10.1220.10 1 49 1.4E-30 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VV1_2538 96e6ff2f82080708269df322633908ae 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 1.9E-22 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 VV1_2538 96e6ff2f82080708269df322633908ae 90 Gene3D G3DSA:1.20.890.30 50 90 1.5E-19 T 14-10-2018 VV1_2538 96e6ff2f82080708269df322633908ae 90 SUPERFAMILY SSF47598 6 82 1.04E-18 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VV1_0057 157365c9f157f2e7ef610865b9daba00 183 Pfam PF11659 Protein of unknown function (DUF3261) 32 175 9.7E-34 T 14-10-2018 IPR021675 Protein of unknown function DUF3261 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.948 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.9E-63 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 SUPERFAMILY SSF53098 3 156 5.06E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.2E-75 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VV1_2157 4dba129ebf218a24366efe92ad0e6cac 173 Gene3D G3DSA:3.30.420.10 2 159 2.7E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_0034 8dd2d08057b1d9f3960f023716a56447 307 SUPERFAMILY SSF161098 68 294 2.35E-47 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0034 8dd2d08057b1d9f3960f023716a56447 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 294 1.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0034 8dd2d08057b1d9f3960f023716a56447 307 Gene3D G3DSA:1.10.3720.10 64 305 8.5E-56 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0134 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:1.10.1130.10 171 242 2.7E-5 T 14-10-2018 VV2_0134 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:1.10.1130.10 34 165 1.2E-6 T 14-10-2018 VV2_0134 5698a2c26930843e624b33ba3096e13c 323 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 248 283 3.7E-10 T 14-10-2018 IPR010177 Doubled CXXCH motif VV2_0134 5698a2c26930843e624b33ba3096e13c 323 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 208 240 3.4E-8 T 14-10-2018 IPR010177 Doubled CXXCH motif VV2_0134 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 201 241 1.2E-11 T 14-10-2018 IPR010177 Doubled CXXCH motif VV2_0134 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 248 283 3.5E-11 T 14-10-2018 IPR010177 Doubled CXXCH motif VV2_0134 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 87 143 9.4E-7 T 14-10-2018 IPR010177 Doubled CXXCH motif VV2_0134 5698a2c26930843e624b33ba3096e13c 323 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 157 191 2.0E-6 T 14-10-2018 IPR010177 Doubled CXXCH motif VV2_0134 5698a2c26930843e624b33ba3096e13c 323 SUPERFAMILY SSF48695 58 307 1.86E-49 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV2_0134 5698a2c26930843e624b33ba3096e13c 323 Gene3D G3DSA:3.90.10.10 244 319 8.4E-6 T 14-10-2018 VV2_0134 5698a2c26930843e624b33ba3096e13c 323 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 56 316 2.5E-96 T 14-10-2018 IPR020015 Decaheme cytochrome, c-type, DmsE VV1_2759 cfd75ea9f3c0bcd8e1158625f07769a7 398 SMART SM00267 227 397 1.4E-55 T 14-10-2018 IPR000160 GGDEF domain VV1_2759 cfd75ea9f3c0bcd8e1158625f07769a7 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 240 393 1.6E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_2759 cfd75ea9f3c0bcd8e1158625f07769a7 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 397 7.2E-44 T 14-10-2018 IPR000160 GGDEF domain VV1_2759 cfd75ea9f3c0bcd8e1158625f07769a7 398 SUPERFAMILY SSF55073 243 397 1.57E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2759 cfd75ea9f3c0bcd8e1158625f07769a7 398 Gene3D G3DSA:3.30.70.270 228 397 3.1E-50 T 14-10-2018 VV1_0029 3fbb81ad4fc79acc16bbfa391d503b5e 226 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 33 185 4.1E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VV1_2177 e24fd2c2c7ff6f0f40af8112c1da8fc1 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.1E-157 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VV1_2177 e24fd2c2c7ff6f0f40af8112c1da8fc1 387 SUPERFAMILY SSF52440 174 280 3.16E-40 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_2177 e24fd2c2c7ff6f0f40af8112c1da8fc1 387 Gene3D G3DSA:3.30.1490.330 264 345 1.4E-23 T 14-10-2018 VV1_2177 e24fd2c2c7ff6f0f40af8112c1da8fc1 387 SUPERFAMILY SSF56059 2 385 7.77E-88 T 14-10-2018 VV1_1009 dd20feba06212fb7afb9bd82a771f5e2 144 Pfam PF00258 Flavodoxin 4 136 9.9E-22 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VV1_1009 dd20feba06212fb7afb9bd82a771f5e2 144 Gene3D G3DSA:3.40.50.360 1 144 4.5E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1009 dd20feba06212fb7afb9bd82a771f5e2 144 SUPERFAMILY SSF52218 2 143 6.49E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_2490 94dd2e09480470c47313ecd280e278a9 124 Gene3D G3DSA:3.30.1330.40 1 123 1.8E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV1_2490 94dd2e09480470c47313ecd280e278a9 124 Pfam PF01042 Endoribonuclease L-PSP 35 98 8.8E-7 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VV1_2490 94dd2e09480470c47313ecd280e278a9 124 SUPERFAMILY SSF55298 9 121 2.02E-23 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV1_0359 6b20982e366cbbda59a70260dc530489 299 SUPERFAMILY SSF53807 13 294 2.85E-50 T 14-10-2018 VV1_0359 6b20982e366cbbda59a70260dc530489 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 291 2.4E-20 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VV1_0359 6b20982e366cbbda59a70260dc530489 299 Gene3D G3DSA:3.40.50.1980 21 184 8.2E-19 T 14-10-2018 VV1_2154 5ab4f6252f54b96121182413c37bf810 247 Pfam PF13649 Methyltransferase domain 65 163 1.5E-12 T 14-10-2018 VV1_2154 5ab4f6252f54b96121182413c37bf810 247 SUPERFAMILY SSF53335 25 247 7.74E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2154 5ab4f6252f54b96121182413c37bf810 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 10 247 2.2E-117 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VV1_2154 5ab4f6252f54b96121182413c37bf810 247 Gene3D G3DSA:3.40.50.150 23 247 4.0E-63 T 14-10-2018 VV1_2154 5ab4f6252f54b96121182413c37bf810 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 8 247 42.992 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VV1_2154 5ab4f6252f54b96121182413c37bf810 247 PIRSF PIRSF006325 6 247 1.9E-124 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VV1_2247 bc9a1ff9e91778aa4296c8ff99636fbb 210 SUPERFAMILY SSF56925 55 181 4.19E-11 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV1_2247 bc9a1ff9e91778aa4296c8ff99636fbb 210 Gene3D G3DSA:2.40.160.20 32 192 5.3E-7 T 14-10-2018 VV1_2832 ebd5b7746f4717570985eac7c6c012dd 208 Gene3D G3DSA:1.10.357.10 2 208 1.8E-56 T 14-10-2018 VV1_2832 ebd5b7746f4717570985eac7c6c012dd 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_2832 ebd5b7746f4717570985eac7c6c012dd 208 SUPERFAMILY SSF46689 3 77 4.41E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_2832 ebd5b7746f4717570985eac7c6c012dd 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV1_2832 ebd5b7746f4717570985eac7c6c012dd 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_2832 ebd5b7746f4717570985eac7c6c012dd 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_2832 ebd5b7746f4717570985eac7c6c012dd 208 SUPERFAMILY SSF48498 80 207 2.71E-41 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV1_2975 e4373c1877097891e81e34ab7e636f34 347 Gene3D G3DSA:1.10.3720.10 133 339 1.9E-18 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2975 e4373c1877097891e81e34ab7e636f34 347 SUPERFAMILY SSF161098 139 325 3.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2975 e4373c1877097891e81e34ab7e636f34 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 8.8E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0271 f3ebf12ed6738097df6cd4824bf4559d 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 2.6E-47 T 14-10-2018 IPR009912 Zinc-ribbon containing domain VV2_1136 ea64e41a51d49bc426887c13042177a6 206 SUPERFAMILY SSF51161 22 202 6.65E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV2_1136 ea64e41a51d49bc426887c13042177a6 206 Gene3D G3DSA:2.160.10.10 18 203 6.2E-68 T 14-10-2018 VV2_1136 ea64e41a51d49bc426887c13042177a6 206 SMART SM01266 24 77 2.4E-13 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VV2_1136 ea64e41a51d49bc426887c13042177a6 206 Pfam PF12464 Maltose acetyltransferase 26 68 3.8E-12 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VV2_1136 ea64e41a51d49bc426887c13042177a6 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 183 5.4E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VV2_1136 ea64e41a51d49bc426887c13042177a6 206 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV1_0345 e6b6fe336e4c6cba5c98a04436af5c8d 281 Gene3D G3DSA:3.40.50.1820 4 280 5.0E-97 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0345 e6b6fe336e4c6cba5c98a04436af5c8d 281 SUPERFAMILY SSF53474 3 279 3.01E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0345 e6b6fe336e4c6cba5c98a04436af5c8d 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 1.9E-119 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 VV1_0345 e6b6fe336e4c6cba5c98a04436af5c8d 281 Pfam PF00756 Putative esterase 23 272 1.1E-60 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VV1_2401 415ce181aa83ee4c3097381f21c3b212 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 2.3E-143 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VV1_2401 415ce181aa83ee4c3097381f21c3b212 320 Gene3D G3DSA:1.10.443.10 95 310 6.6E-70 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_2401 415ce181aa83ee4c3097381f21c3b212 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 87 1.5E-22 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV1_2401 415ce181aa83ee4c3097381f21c3b212 320 SUPERFAMILY SSF56349 100 315 2.33E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_2401 415ce181aa83ee4c3097381f21c3b212 320 Gene3D G3DSA:1.10.150.130 1 94 1.7E-28 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VV1_2401 415ce181aa83ee4c3097381f21c3b212 320 Pfam PF00589 Phage integrase family 105 306 3.2E-45 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_1327 5af3001a5373deb738f4df1ef0ade305 199 SUPERFAMILY SSF54534 2 140 3.14E-37 T 14-10-2018 VV1_1327 5af3001a5373deb738f4df1ef0ade305 199 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.5E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VV1_1327 5af3001a5373deb738f4df1ef0ade305 199 Gene3D G3DSA:3.10.50.40 3 154 1.5E-60 T 14-10-2018 VV1_1327 5af3001a5373deb738f4df1ef0ade305 199 Gene3D G3DSA:2.40.10.330 71 121 1.5E-60 T 14-10-2018 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:1.10.10.10 1 74 2.5E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 8.4E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF55252 82 151 2.62E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 2.2E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 3.4E-43 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.387 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 Gene3D G3DSA:3.30.1360.40 75 156 2.4E-35 T 14-10-2018 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 2.3E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 129 2.0E-16 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VV1_0674 c061b19b1dea93d1ccf3d8deb46dc635 156 SUPERFAMILY SSF46785 4 77 1.5E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2374 15b8e40592d0eb1b30acae17bcd609d0 214 Pfam PF00857 Isochorismatase family 9 204 3.1E-21 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VV1_2374 15b8e40592d0eb1b30acae17bcd609d0 214 Gene3D G3DSA:3.40.50.850 6 209 3.0E-31 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VV1_2374 15b8e40592d0eb1b30acae17bcd609d0 214 SUPERFAMILY SSF52499 4 205 5.1E-24 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VV1_0056 9f0ac48f6e7f74f769d7439c0f1339f8 769 Pfam PF03176 MMPL family 195 399 4.6E-15 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VV1_0056 9f0ac48f6e7f74f769d7439c0f1339f8 769 Gene3D G3DSA:1.20.1640.10 602 709 9.5E-7 T 14-10-2018 VV1_0056 9f0ac48f6e7f74f769d7439c0f1339f8 769 SUPERFAMILY SSF82866 637 763 1.31E-21 T 14-10-2018 VV1_0056 9f0ac48f6e7f74f769d7439c0f1339f8 769 SUPERFAMILY SSF82866 192 398 1.44E-18 T 14-10-2018 VV2_0528 c9b0145c55621af85dffd57819033d62 562 SMART SM00283 297 558 1.1E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0528 c9b0145c55621af85dffd57819033d62 562 SUPERFAMILY SSF58104 252 559 3.01E-68 T 14-10-2018 VV2_0528 c9b0145c55621af85dffd57819033d62 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 525 3.5E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0528 c9b0145c55621af85dffd57819033d62 562 Gene3D G3DSA:1.10.287.950 228 560 2.0E-65 T 14-10-2018 VV2_0528 c9b0145c55621af85dffd57819033d62 562 SMART SM01358 4 248 0.0011 T 14-10-2018 IPR032255 Helical bimodular sensor domain VV2_1293 48b918ee96be2560a17e944c86dc2c8d 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 308 1.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1293 48b918ee96be2560a17e944c86dc2c8d 330 SUPERFAMILY SSF161098 99 287 5.49E-19 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1293 48b918ee96be2560a17e944c86dc2c8d 330 Gene3D G3DSA:1.10.3720.10 92 308 4.2E-15 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1718 8a6e31ea8f9cd9c616440d79f7baddf8 150 Pfam PF00583 Acetyltransferase (GNAT) family 15 121 2.9E-14 T 14-10-2018 IPR000182 GNAT domain VV1_1718 8a6e31ea8f9cd9c616440d79f7baddf8 150 SUPERFAMILY SSF55729 1 145 1.89E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1718 8a6e31ea8f9cd9c616440d79f7baddf8 150 Gene3D G3DSA:3.40.630.30 4 147 1.9E-40 T 14-10-2018 VV1_1718 8a6e31ea8f9cd9c616440d79f7baddf8 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 1.7E-37 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VV1_1832 552121ace3773be2f5b58679acbd5e32 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 4.7E-72 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 VV1_1852 0a343e9fb332e55e3e30be65e6c4d794 167 SUPERFAMILY SSF55729 2 141 1.02E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1852 0a343e9fb332e55e3e30be65e6c4d794 167 Gene3D G3DSA:3.40.630.30 1 151 2.5E-21 T 14-10-2018 VV1_1852 0a343e9fb332e55e3e30be65e6c4d794 167 Pfam PF13302 Acetyltransferase (GNAT) domain 34 138 2.9E-17 T 14-10-2018 IPR000182 GNAT domain VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 Gene3D G3DSA:3.40.190.290 96 295 4.2E-65 T 14-10-2018 VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 Pfam PF03466 LysR substrate binding domain 93 293 3.5E-39 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 SUPERFAMILY SSF46785 7 86 1.64E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 Gene3D G3DSA:1.10.10.10 6 93 1.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1419 8cb6cff9e279d898bb0acaa646eae081 305 SUPERFAMILY SSF53850 94 299 1.09E-41 T 14-10-2018 VV2_0150 272d868a5c89782672bb3882e262df88 289 Gene3D G3DSA:3.40.190.10 152 250 9.1E-26 T 14-10-2018 VV2_0150 272d868a5c89782672bb3882e262df88 289 SUPERFAMILY SSF53850 88 276 4.16E-26 T 14-10-2018 VV2_0150 272d868a5c89782672bb3882e262df88 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0150 272d868a5c89782672bb3882e262df88 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0150 272d868a5c89782672bb3882e262df88 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0150 272d868a5c89782672bb3882e262df88 289 Pfam PF03466 LysR substrate binding domain 119 279 1.7E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0150 272d868a5c89782672bb3882e262df88 289 Gene3D G3DSA:3.40.190.10 112 274 9.1E-26 T 14-10-2018 VV2_0150 272d868a5c89782672bb3882e262df88 289 SUPERFAMILY SSF46785 3 84 1.24E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0150 272d868a5c89782672bb3882e262df88 289 Gene3D G3DSA:1.10.10.10 1 87 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0150 272d868a5c89782672bb3882e262df88 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 6.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0603 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.40.10.120 37 261 2.0E-85 T 14-10-2018 VV1_0603 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50156 381 452 1.58E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV1_0603 41e549eec986ff5589ef642f22272a55 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 1.2E-164 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VV1_0603 41e549eec986ff5589ef642f22272a55 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 444 2.0E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_0603 41e549eec986ff5589ef642f22272a55 455 SMART SM00228 374 447 3.6E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_0603 41e549eec986ff5589ef642f22272a55 455 SMART SM00228 267 349 6.2E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_0603 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.30.42.10 362 455 3.3E-27 T 14-10-2018 VV1_0603 41e549eec986ff5589ef642f22272a55 455 Gene3D G3DSA:2.30.42.10 265 361 1.2E-27 T 14-10-2018 VV1_0603 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0603 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0603 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0603 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0603 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0603 41e549eec986ff5589ef642f22272a55 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.5E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VV1_0603 41e549eec986ff5589ef642f22272a55 455 Pfam PF13180 PDZ domain 269 358 7.7E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 VV1_0603 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50156 233 350 8.25E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV1_0603 41e549eec986ff5589ef642f22272a55 455 SUPERFAMILY SSF50494 11 275 2.7E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan VV1_0603 41e549eec986ff5589ef642f22272a55 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 2.2E-31 T 14-10-2018 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 SUPERFAMILY SSF53822 61 313 2.55E-40 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 Gene3D G3DSA:3.40.50.2300 155 326 7.0E-26 T 14-10-2018 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 3.5E-140 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 Gene3D G3DSA:1.10.260.40 1 61 1.1E-25 T 14-10-2018 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 212 1.2E-14 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 Gene3D G3DSA:3.40.50.2300 62 154 2.2E-19 T 14-10-2018 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 SMART SM00354 1 73 2.4E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0201 79341a52d3313a5e03a4cb01af28c35a 326 SUPERFAMILY SSF47413 1 58 1.61E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_0230 532efe95a5ed9d12632404154348643b 108 SUPERFAMILY SSF101498 3 99 7.19E-20 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VV1_0230 532efe95a5ed9d12632404154348643b 108 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 96 5.5E-19 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VV1_0230 532efe95a5ed9d12632404154348643b 108 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 99 1.5E-25 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 Gene3D G3DSA:3.40.250.10 471 563 1.6E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 SUPERFAMILY SSF55424 344 466 9.28E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 9.7E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 Pfam PF00581 Rhodanese-like domain 482 562 3.3E-10 T 14-10-2018 IPR001763 Rhodanese-like domain VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 SMART SM00450 473 565 2.1E-13 T 14-10-2018 IPR001763 Rhodanese-like domain VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 SUPERFAMILY SSF51905 2 197 4.73E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 SUPERFAMILY SSF52821 459 562 6.16E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 Gene3D G3DSA:3.50.50.60 115 461 3.6E-186 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 Gene3D G3DSA:3.50.50.60 3 361 3.6E-186 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.1E-23 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.1E-23 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 5.1E-23 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.1E-23 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-23 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.0E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 SUPERFAMILY SSF51905 155 341 2.0E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-19 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.2E-19 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.2E-19 T 14-10-2018 VV2_0346 e6dc34038f0d9f0ce90001e22940df10 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.2E-19 T 14-10-2018 VV1_1030 3d60978a79518bffb9d8704659b17dee 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 2.8E-143 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 VV1_1030 3d60978a79518bffb9d8704659b17dee 312 Gene3D G3DSA:3.30.470.10 10 127 1.4E-106 T 14-10-2018 VV1_1030 3d60978a79518bffb9d8704659b17dee 312 Pfam PF01063 Amino-transferase class IV 36 268 3.9E-47 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VV1_1030 3d60978a79518bffb9d8704659b17dee 312 SUPERFAMILY SSF56752 7 307 1.11E-103 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VV1_1030 3d60978a79518bffb9d8704659b17dee 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VV1_1030 3d60978a79518bffb9d8704659b17dee 312 Gene3D G3DSA:3.20.10.10 138 289 1.4E-106 T 14-10-2018 VV2_0444 f899502c3606e3a16e38a14c7f8c36d3 151 Gene3D G3DSA:2.60.40.4150 22 151 2.2E-37 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VV2_0444 f899502c3606e3a16e38a14c7f8c36d3 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 144 2.4E-37 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VV2_0444 f899502c3606e3a16e38a14c7f8c36d3 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 7 146 2.7E-45 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VV2_1137 f0c2bbbe2a05a98dfedd3acb04c2fef5 361 SUPERFAMILY SSF48452 80 141 1.52E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1137 f0c2bbbe2a05a98dfedd3acb04c2fef5 361 Gene3D G3DSA:1.25.40.10 28 230 7.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1137 f0c2bbbe2a05a98dfedd3acb04c2fef5 361 SMART SM00028 91 124 0.008 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1137 f0c2bbbe2a05a98dfedd3acb04c2fef5 361 Pfam PF02698 DUF218 domain 189 309 3.6E-20 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VV2_0322 de6c80aa6b33743d959df87c52a59114 319 SUPERFAMILY SSF52172 6 159 1.71E-37 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0322 de6c80aa6b33743d959df87c52a59114 319 SMART SM00448 8 120 7.0E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0322 de6c80aa6b33743d959df87c52a59114 319 Pfam PF00072 Response regulator receiver domain 10 117 7.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0322 de6c80aa6b33743d959df87c52a59114 319 Gene3D G3DSA:3.40.50.2300 3 139 1.2E-34 T 14-10-2018 VV2_0322 de6c80aa6b33743d959df87c52a59114 319 SUPERFAMILY SSF55073 156 317 8.11E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0322 de6c80aa6b33743d959df87c52a59114 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 312 2.4E-45 T 14-10-2018 IPR000160 GGDEF domain VV2_0322 de6c80aa6b33743d959df87c52a59114 319 Gene3D G3DSA:3.30.70.270 140 315 5.9E-53 T 14-10-2018 VV2_0322 de6c80aa6b33743d959df87c52a59114 319 SMART SM00267 140 316 4.6E-59 T 14-10-2018 IPR000160 GGDEF domain VV2_0322 de6c80aa6b33743d959df87c52a59114 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 315 3.4E-49 T 14-10-2018 IPR000160 GGDEF domain VV1_0908 c7815587f02c33da9909e5fef43b3b29 201 Gene3D G3DSA:3.30.1050.10 7 119 7.9E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV1_0908 c7815587f02c33da9909e5fef43b3b29 201 Pfam PF02036 SCP-2 sterol transfer family 18 111 4.2E-22 T 14-10-2018 IPR003033 SCP2 sterol-binding domain VV1_0908 c7815587f02c33da9909e5fef43b3b29 201 SUPERFAMILY SSF55718 13 117 5.3E-10 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VV1_2973 33329dadf550a7f853db342427083d8c 288 SUPERFAMILY SSF52540 6 257 1.1E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2973 33329dadf550a7f853db342427083d8c 288 Gene3D G3DSA:3.40.50.300 4 284 2.5E-92 T 14-10-2018 VV1_2973 33329dadf550a7f853db342427083d8c 288 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2973 33329dadf550a7f853db342427083d8c 288 Pfam PF00005 ABC transporter 26 186 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2973 33329dadf550a7f853db342427083d8c 288 SMART SM00382 35 244 2.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0720 d300f7dc3a5767162a945c951918f3a5 419 Pfam PF02687 FtsX-like permease family 317 410 7.6E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV1_0720 d300f7dc3a5767162a945c951918f3a5 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 8.0E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VV1_2448 a5dac8500091fa3dc07d7c296af99645 141 SUPERFAMILY SSF55729 1 137 5.15E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2448 a5dac8500091fa3dc07d7c296af99645 141 Gene3D G3DSA:3.40.630.30 1 138 6.6E-30 T 14-10-2018 VV1_2448 a5dac8500091fa3dc07d7c296af99645 141 Pfam PF13508 Acetyltransferase (GNAT) domain 47 120 9.5E-14 T 14-10-2018 IPR000182 GNAT domain VV2_0953 a969fd8b52db409ac962db00c022d683 318 Pfam PF03466 LysR substrate binding domain 96 274 4.2E-8 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0953 a969fd8b52db409ac962db00c022d683 318 Gene3D G3DSA:1.10.10.10 1 89 5.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0953 a969fd8b52db409ac962db00c022d683 318 Gene3D G3DSA:3.40.190.10 172 247 2.4E-18 T 14-10-2018 VV2_0953 a969fd8b52db409ac962db00c022d683 318 SUPERFAMILY SSF53850 88 299 4.07E-17 T 14-10-2018 VV2_0953 a969fd8b52db409ac962db00c022d683 318 SUPERFAMILY SSF46785 6 84 1.84E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0953 a969fd8b52db409ac962db00c022d683 318 Gene3D G3DSA:3.40.190.10 91 171 2.4E-18 T 14-10-2018 VV2_0953 a969fd8b52db409ac962db00c022d683 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.1E-42 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 Gene3D G3DSA:3.40.50.2300 153 263 5.8E-40 T 14-10-2018 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 SUPERFAMILY SSF55804 1 146 7.98E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 618 1.1E-85 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 256 2.0E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 3.2E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 3.9E-30 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 Gene3D G3DSA:3.40.930.10 1 147 1.2E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 Pfam PF02378 Phosphotransferase system, EIIC 290 565 5.5E-16 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV2_1349 fb08ef3be4c486d1cf622a179e8e3738 633 SUPERFAMILY SSF52794 164 259 1.15E-34 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV1_2350 99769e1c6e4d0758046b9f4f4010a625 280 Pfam PF03280 Proteobacterial lipase chaperone protein 86 267 1.2E-44 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VV1_2350 99769e1c6e4d0758046b9f4f4010a625 280 SUPERFAMILY SSF158855 34 278 1.44E-54 T 14-10-2018 VV1_2350 99769e1c6e4d0758046b9f4f4010a625 280 Hamap MF_00790 Lipase chaperone [lifO]. 1 275 17.447 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VV2_0420 1f4c1c02badffc4d1a25d599a8bbc3d4 203 Pfam PF01609 Transposase DDE domain 10 189 1.2E-23 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 Pfam PF00230 Major intrinsic protein 2 222 1.5E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 SUPERFAMILY SSF81338 2 227 1.96E-68 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 Gene3D G3DSA:1.20.1080.10 1 228 3.5E-85 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 ProSitePatterns PS00221 MIP family signature. 60 68 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 5.2E-60 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_2010 cafbdb23d6d8d458e3a4e89d5d0dc0df 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.127 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VV1_1961 dafdfdfeefe63a129db27f319aa4b327 205 SMART SM00382 26 205 3.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1961 dafdfdfeefe63a129db27f319aa4b327 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1961 dafdfdfeefe63a129db27f319aa4b327 205 Pfam PF00005 ABC transporter 18 158 3.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1961 dafdfdfeefe63a129db27f319aa4b327 205 SUPERFAMILY SSF52540 2 190 7.66E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1961 dafdfdfeefe63a129db27f319aa4b327 205 Gene3D G3DSA:3.40.50.300 1 195 4.9E-42 T 14-10-2018 VV1_1961 dafdfdfeefe63a129db27f319aa4b327 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.8E-78 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VV1_0523 2dd84ade55e962a998bc294eae591dd4 344 Gene3D G3DSA:3.20.20.100 1 344 7.9E-134 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VV1_0523 2dd84ade55e962a998bc294eae591dd4 344 Pfam PF00248 Aldo/keto reductase family 15 335 6.4E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VV1_0523 2dd84ade55e962a998bc294eae591dd4 344 SUPERFAMILY SSF51430 1 344 1.31E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VV2_1019 7d95292b6a8c4aa061543b806c6dbbbd 151 Pfam PF03610 PTS system fructose IIA component 4 116 1.1E-30 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VV2_1019 7d95292b6a8c4aa061543b806c6dbbbd 151 Gene3D G3DSA:3.40.50.510 1 141 1.0E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VV2_1019 7d95292b6a8c4aa061543b806c6dbbbd 151 SUPERFAMILY SSF53062 1 126 4.84E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VV1_0577 450069611d89b7de5553bb150177055e 486 Gene3D G3DSA:3.90.190.20 326 484 1.1E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0577 450069611d89b7de5553bb150177055e 486 SUPERFAMILY SSF53244 326 474 4.58E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0577 450069611d89b7de5553bb150177055e 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 4.7E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VV1_0577 450069611d89b7de5553bb150177055e 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 9.3E-188 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_0577 450069611d89b7de5553bb150177055e 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.31 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VV1_0577 450069611d89b7de5553bb150177055e 486 SUPERFAMILY SSF53623 108 321 5.1E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0577 450069611d89b7de5553bb150177055e 486 Gene3D G3DSA:3.40.1190.10 111 325 5.7E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0577 450069611d89b7de5553bb150177055e 486 Gene3D G3DSA:3.40.50.720 23 110 8.7E-34 T 14-10-2018 VV1_0577 450069611d89b7de5553bb150177055e 486 SUPERFAMILY SSF51984 16 109 4.45E-29 T 14-10-2018 VV1_0577 450069611d89b7de5553bb150177055e 486 Pfam PF08245 Mur ligase middle domain 127 307 1.4E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VV1_0577 450069611d89b7de5553bb150177055e 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 417 6.7E-23 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VV2_1069 243badde804825901ca3227c00acd9e7 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV2_1069 243badde804825901ca3227c00acd9e7 487 SUPERFAMILY SSF48179 283 486 1.16E-64 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV2_1069 243badde804825901ca3227c00acd9e7 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 463 1.6E-90 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VV2_1069 243badde804825901ca3227c00acd9e7 487 Gene3D G3DSA:1.10.1040.10 282 487 1.5E-74 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV2_1069 243badde804825901ca3227c00acd9e7 487 SUPERFAMILY SSF51735 4 281 1.93E-99 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1069 243badde804825901ca3227c00acd9e7 487 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 5.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV2_1069 243badde804825901ca3227c00acd9e7 487 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 5.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV2_1069 243badde804825901ca3227c00acd9e7 487 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 5.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV2_1069 243badde804825901ca3227c00acd9e7 487 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 5.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VV2_1069 243badde804825901ca3227c00acd9e7 487 Gene3D G3DSA:3.40.50.720 7 281 4.7E-111 T 14-10-2018 VV2_1069 243badde804825901ca3227c00acd9e7 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 9.2E-52 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_0276 4ba26fa3bb35304a82e056074bd4c537 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 2.0E-27 T 14-10-2018 VV1_0276 4ba26fa3bb35304a82e056074bd4c537 105 Gene3D G3DSA:3.30.460.10 2 105 1.2E-36 T 14-10-2018 VV1_0276 4ba26fa3bb35304a82e056074bd4c537 105 SUPERFAMILY SSF81301 5 105 1.19E-37 T 14-10-2018 VV1_0276 4ba26fa3bb35304a82e056074bd4c537 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 24.907 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VV1_0276 4ba26fa3bb35304a82e056074bd4c537 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.8E-38 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VV1_2132 cd7c7523faac21e2d80f778071e1b14d 485 Gene3D G3DSA:3.40.50.2000 256 467 2.7E-151 T 14-10-2018 VV1_2132 cd7c7523faac21e2d80f778071e1b14d 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 9.0E-162 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VV1_2132 cd7c7523faac21e2d80f778071e1b14d 485 Pfam PF00534 Glycosyl transferases group 1 300 446 3.2E-13 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_2132 cd7c7523faac21e2d80f778071e1b14d 485 Gene3D G3DSA:3.40.50.2000 8 481 2.7E-151 T 14-10-2018 VV1_2132 cd7c7523faac21e2d80f778071e1b14d 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 38.788 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VV1_2132 cd7c7523faac21e2d80f778071e1b14d 485 Pfam PF08323 Starch synthase catalytic domain 8 239 2.8E-65 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VV1_2132 cd7c7523faac21e2d80f778071e1b14d 485 SUPERFAMILY SSF53756 5 485 1.5E-107 T 14-10-2018 VV1_1889 fe0d1282f8ac8c5ea1d9d52ce4a8df17 204 Gene3D G3DSA:3.40.50.360 1 182 7.1E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1889 fe0d1282f8ac8c5ea1d9d52ce4a8df17 204 SUPERFAMILY SSF52218 5 180 3.19E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1889 fe0d1282f8ac8c5ea1d9d52ce4a8df17 204 Pfam PF02525 Flavodoxin-like fold 5 173 7.6E-46 T 14-10-2018 IPR003680 Flavodoxin-like fold VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 Gene3D G3DSA:1.10.10.10 2 91 8.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 SUPERFAMILY SSF53850 93 298 1.09E-21 T 14-10-2018 VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 Pfam PF03466 LysR substrate binding domain 97 297 4.2E-13 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 Gene3D G3DSA:3.40.190.10 173 271 8.6E-22 T 14-10-2018 VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 SUPERFAMILY SSF46785 7 89 3.05E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 Gene3D G3DSA:3.40.190.10 93 295 8.6E-22 T 14-10-2018 VV1_0456 2301f514f1ab3c907963b4ecd782d6f9 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1634 b2720754222c61e3ef11c736ec290e09 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 182 3.6E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1634 b2720754222c61e3ef11c736ec290e09 215 Gene3D G3DSA:1.10.150.240 17 80 1.1E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VV2_1634 b2720754222c61e3ef11c736ec290e09 215 Gene3D G3DSA:3.40.50.1000 5 185 1.1E-50 T 14-10-2018 IPR023214 HAD superfamily VV2_1634 b2720754222c61e3ef11c736ec290e09 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 9.9E-33 T 14-10-2018 VV2_1634 b2720754222c61e3ef11c736ec290e09 215 SUPERFAMILY SSF56784 1 212 1.96E-50 T 14-10-2018 IPR036412 HAD-like superfamily VV2_1634 b2720754222c61e3ef11c736ec290e09 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1634 b2720754222c61e3ef11c736ec290e09 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1634 b2720754222c61e3ef11c736ec290e09 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_1634 b2720754222c61e3ef11c736ec290e09 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 6.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV1_1534 4bb41c967bcf7fd15546265cce959b52 168 Pfam PF17283 SprT-like zinc ribbon domain 123 163 2.4E-10 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain VV1_1534 4bb41c967bcf7fd15546265cce959b52 168 SMART SM00731 14 163 4.9E-57 T 14-10-2018 IPR006640 SprT-like VV1_1534 4bb41c967bcf7fd15546265cce959b52 168 Pfam PF10263 SprT-like family 17 117 2.9E-18 T 14-10-2018 IPR006640 SprT-like VV1_1534 4bb41c967bcf7fd15546265cce959b52 168 Hamap MF_00746 Protein SprT [sprT]. 10 163 43.327 T 14-10-2018 IPR023483 Uncharacterised protein family SprT VV1_2191 dc365c0006357c6121d8eef9d493d5a5 107 Pfam PF01381 Helix-turn-helix 17 62 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_2191 dc365c0006357c6121d8eef9d493d5a5 107 SUPERFAMILY SSF47413 11 71 8.31E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_2191 dc365c0006357c6121d8eef9d493d5a5 107 Gene3D G3DSA:1.10.260.40 2 77 1.4E-32 T 14-10-2018 VV1_2191 dc365c0006357c6121d8eef9d493d5a5 107 SMART SM00530 16 69 3.0E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV2_0086 8a931718e499c0d4232dea0595b34add 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 188 198 6.1E-6 T 14-10-2018 IPR001775 GspD/PilQ family VV2_0086 8a931718e499c0d4232dea0595b34add 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 361 379 6.1E-6 T 14-10-2018 IPR001775 GspD/PilQ family VV2_0086 8a931718e499c0d4232dea0595b34add 441 Pfam PF13629 Pilus formation protein N terminal region 26 93 1.9E-18 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal VV2_0086 8a931718e499c0d4232dea0595b34add 441 Pfam PF00263 Bacterial type II and III secretion system protein 242 396 5.4E-42 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 VV1_0460 9cbc2826b753981ffe4f664b273b8532 232 Gene3D G3DSA:1.20.58.220 119 228 1.2E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily VV1_0460 9cbc2826b753981ffe4f664b273b8532 232 Gene3D G3DSA:1.20.58.220 2 118 1.4E-39 T 14-10-2018 IPR038078 PhoU-like domain superfamily VV1_0460 9cbc2826b753981ffe4f664b273b8532 232 PIRSF PIRSF003107 4 223 1.2E-68 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VV1_0460 9cbc2826b753981ffe4f664b273b8532 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.2E-74 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VV1_0460 9cbc2826b753981ffe4f664b273b8532 232 SUPERFAMILY SSF109755 10 226 1.36E-69 T 14-10-2018 VV1_0460 9cbc2826b753981ffe4f664b273b8532 232 Pfam PF01895 PhoU domain 23 108 3.5E-21 T 14-10-2018 IPR026022 PhoU domain VV1_0460 9cbc2826b753981ffe4f664b273b8532 232 Pfam PF01895 PhoU domain 128 210 3.1E-17 T 14-10-2018 IPR026022 PhoU domain VV1_2062 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 73 126 1.3E-11 T 14-10-2018 IPR000644 CBS domain VV1_2062 d1d08c5b9524ed1148f65652d1a0d610 138 Pfam PF00571 CBS domain 6 61 5.2E-6 T 14-10-2018 IPR000644 CBS domain VV1_2062 d1d08c5b9524ed1148f65652d1a0d610 138 SUPERFAMILY SSF54631 2 126 3.79E-30 T 14-10-2018 VV1_2062 d1d08c5b9524ed1148f65652d1a0d610 138 Gene3D G3DSA:3.10.580.10 1 135 1.5E-28 T 14-10-2018 VV1_2062 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 80 127 5.2E-7 T 14-10-2018 IPR000644 CBS domain VV1_2062 d1d08c5b9524ed1148f65652d1a0d610 138 SMART SM00116 13 61 1.4 T 14-10-2018 IPR000644 CBS domain VV1_2891 6e3b3d094798180612f5b98a2be6d2ff 305 Gene3D G3DSA:3.40.50.300 1 298 2.1E-29 T 14-10-2018 VV1_2891 6e3b3d094798180612f5b98a2be6d2ff 305 SUPERFAMILY SSF52540 13 275 3.8E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2891 6e3b3d094798180612f5b98a2be6d2ff 305 Pfam PF13469 Sulfotransferase family 15 263 1.9E-14 T 14-10-2018 VV1_2462 64155dd7539650f6acae83c6b0ec2faf 402 Gene3D G3DSA:1.10.443.10 218 402 1.3E-44 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_2462 64155dd7539650f6acae83c6b0ec2faf 402 Pfam PF13356 Arm DNA-binding domain 7 91 5.1E-11 T 14-10-2018 IPR025166 Integrase, DNA-binding domain VV1_2462 64155dd7539650f6acae83c6b0ec2faf 402 SUPERFAMILY SSF56349 101 398 7.36E-62 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_2462 64155dd7539650f6acae83c6b0ec2faf 402 Gene3D G3DSA:3.30.160.390 6 92 2.5E-10 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VV1_2462 64155dd7539650f6acae83c6b0ec2faf 402 Pfam PF00589 Phage integrase family 254 390 9.0E-34 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_2462 64155dd7539650f6acae83c6b0ec2faf 402 Gene3D G3DSA:1.10.150.130 97 209 6.8E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 Pfam PF13567 Domain of unknown function (DUF4131) 27 173 1.0E-8 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 Gene3D G3DSA:3.60.15.10 494 732 2.9E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 Pfam PF03772 Competence protein 208 467 8.4E-51 T 14-10-2018 IPR004477 ComEC/Rec2-related protein VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 SUPERFAMILY SSF56281 496 729 1.21E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 133 714 1.0E-114 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 405 5.4E-26 T 14-10-2018 IPR004477 ComEC/Rec2-related protein VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 SMART SM00849 505 687 4.8E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_2084 c1dd3ea67499b94138ceaab157365ed4 749 Pfam PF00753 Metallo-beta-lactamase superfamily 503 682 6.6E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_2355 5e498b6deaf65c5ff035b103f8183ae3 311 TIGRFAM TIGR01230 agmatinase: agmatinase 26 299 2.8E-92 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 VV1_2355 5e498b6deaf65c5ff035b103f8183ae3 311 SUPERFAMILY SSF52768 12 303 8.82E-94 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily VV1_2355 5e498b6deaf65c5ff035b103f8183ae3 311 PIRSF PIRSF036979 12 305 3.5E-95 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV1_2355 5e498b6deaf65c5ff035b103f8183ae3 311 Gene3D G3DSA:3.40.800.10 1 308 1.4E-103 T 14-10-2018 VV1_2355 5e498b6deaf65c5ff035b103f8183ae3 311 Pfam PF00491 Arginase family 33 298 1.4E-88 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 VV1_2355 5e498b6deaf65c5ff035b103f8183ae3 311 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VV1_2912 7e9ef3785fe36f3af122220646f62efd 167 SUPERFAMILY SSF54427 28 128 2.88E-34 T 14-10-2018 IPR032710 NTF2-like domain superfamily VV1_2912 7e9ef3785fe36f3af122220646f62efd 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 14-10-2018 VV1_2912 7e9ef3785fe36f3af122220646f62efd 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 25.645 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 VV1_2912 7e9ef3785fe36f3af122220646f62efd 167 Gene3D G3DSA:3.10.450.50 1 167 2.0E-52 T 14-10-2018 VV1_2912 7e9ef3785fe36f3af122220646f62efd 167 Pfam PF02810 SEC-C motif 4 17 5.1E-5 T 14-10-2018 IPR004027 SEC-C motif VV1_2912 7e9ef3785fe36f3af122220646f62efd 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 14-10-2018 IPR004027 SEC-C motif VV1_0829 bfbe64a7711768ed2af6878b360b1116 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.159 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VV1_0829 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF48498 81 191 1.73E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV1_0829 bfbe64a7711768ed2af6878b360b1116 196 SUPERFAMILY SSF46689 5 78 4.03E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0829 bfbe64a7711768ed2af6878b360b1116 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 5.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_0829 bfbe64a7711768ed2af6878b360b1116 196 Gene3D G3DSA:1.10.357.10 3 196 3.4E-77 T 14-10-2018 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 Gene3D G3DSA:2.40.50.530 1 64 4.7E-17 T 14-10-2018 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 SUPERFAMILY SSF143034 2 63 2.88E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.458 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.0E-25 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VV1_2399 cd40eb71624e6d3813ba51561564c7cc 64 Pfam PF01632 Ribosomal protein L35 2 61 1.1E-19 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PIRSF PIRSF019574 1 345 4.2E-123 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 310 3.4E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 Gene3D G3DSA:3.40.190.10 129 318 1.5E-119 T 14-10-2018 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 SUPERFAMILY SSF53850 24 342 1.78E-92 T 14-10-2018 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 3.6E-86 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VV1_2600 2cd2204c886d5b575bcc8077d885421c 345 Gene3D G3DSA:3.40.190.10 29 312 1.5E-119 T 14-10-2018 VV1_1507 5fd71bf2e6e659d9240c413b300b9ab4 203 SUPERFAMILY SSF58104 26 147 1.7E-5 T 14-10-2018 VV2_1010 70867a306e0f35012a0da8acfca2db30 244 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 10 237 2.4E-94 T 14-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family VV2_1010 70867a306e0f35012a0da8acfca2db30 244 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 217 237 2.8E-4 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 SUPERFAMILY SSF51161 32 316 7.15E-83 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 8.1E-116 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 179 7.9E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 0.0029 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.9E-9 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 8.4E-22 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Gene3D G3DSA:3.40.1390.10 1 99 3.4E-31 T 14-10-2018 VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Gene3D G3DSA:2.160.10.10 100 308 3.4E-63 T 14-10-2018 VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV1_1870 c7ef6aaea72baaf1f1ae12af2a6b2e2a 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.178 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VV1_2143 b86864973bf005be0320641c1b3eb81b 445 PIRSF PIRSF018282 1 445 4.1E-255 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VV1_2143 b86864973bf005be0320641c1b3eb81b 445 SUPERFAMILY SSF46785 13 123 1.22E-45 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2143 b86864973bf005be0320641c1b3eb81b 445 Pfam PF17193 MukF C-terminal domain 288 445 1.6E-77 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VV1_2143 b86864973bf005be0320641c1b3eb81b 445 Pfam PF17192 MukF middle domain 126 286 2.1E-78 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VV1_2143 b86864973bf005be0320641c1b3eb81b 445 SUPERFAMILY SSF140570 124 286 2.35E-76 T 14-10-2018 IPR036141 MukF, middle domain superfamily VV1_2143 b86864973bf005be0320641c1b3eb81b 445 Gene3D G3DSA:1.10.225.40 358 445 4.9E-38 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily VV1_2143 b86864973bf005be0320641c1b3eb81b 445 Pfam PF03882 MukF winged-helix domain 10 122 1.5E-54 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VV1_2143 b86864973bf005be0320641c1b3eb81b 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 56.436 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VV1_2143 b86864973bf005be0320641c1b3eb81b 445 Gene3D G3DSA:1.20.58.590 124 316 9.1E-81 T 14-10-2018 IPR036141 MukF, middle domain superfamily VV1_2143 b86864973bf005be0320641c1b3eb81b 445 Gene3D G3DSA:1.10.10.10 29 123 3.4E-46 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0393 fd7a9665a939060a08ece35376fef433 487 Gene3D G3DSA:3.40.190.10 67 465 2.2E-142 T 14-10-2018 VV2_0393 fd7a9665a939060a08ece35376fef433 487 Gene3D G3DSA:3.40.190.10 152 470 2.2E-142 T 14-10-2018 VV2_0393 fd7a9665a939060a08ece35376fef433 487 Pfam PF13379 NMT1-like family 61 341 2.8E-108 T 14-10-2018 VV2_0393 fd7a9665a939060a08ece35376fef433 487 SUPERFAMILY SSF53850 67 372 6.52E-21 T 14-10-2018 VV1_1827 b1ca2a0b119770c414895b8210fbcddf 335 Gene3D G3DSA:3.10.520.20 15 335 4.8E-112 T 14-10-2018 VV1_1827 b1ca2a0b119770c414895b8210fbcddf 335 SUPERFAMILY SSF143631 23 332 6.28E-100 T 14-10-2018 IPR003374 ApbE-like superfamily VV1_1827 b1ca2a0b119770c414895b8210fbcddf 335 Pfam PF02424 ApbE family 31 308 2.7E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VV1_1827 b1ca2a0b119770c414895b8210fbcddf 335 PIRSF PIRSF006268 1 333 8.3E-95 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VV2_0316 e0967fd2fd840f4e60c8869838de2d91 464 PIRSF PIRSF000204 1 464 3.4E-235 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VV2_0316 e0967fd2fd840f4e60c8869838de2d91 464 SUPERFAMILY SSF52467 291 464 1.12E-79 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV2_0316 e0967fd2fd840f4e60c8869838de2d91 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 8.0E-202 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VV2_0316 e0967fd2fd840f4e60c8869838de2d91 464 Gene3D G3DSA:3.40.50.1220 288 464 1.4E-89 T 14-10-2018 VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 Gene3D G3DSA:2.40.30.60 4 100 4.0E-33 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 Pfam PF05239 PRC-barrel domain 103 168 5.8E-12 T 14-10-2018 IPR027275 PRC-barrel domain VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 SUPERFAMILY SSF50447 12 100 7.42E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 Gene3D G3DSA:2.30.30.240 101 182 3.0E-31 T 14-10-2018 VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.13 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 SUPERFAMILY SSF50346 106 182 2.35E-20 T 14-10-2018 IPR011033 PRC-barrel-like superfamily VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.4E-56 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VV1_1616 8c87ca449b8169c50c2cfcc03eaa9cbb 182 Pfam PF01782 RimM N-terminal domain 15 95 6.0E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Pfam PF01493 GXGXG motif 1267 1452 2.2E-84 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 SUPERFAMILY SSF51395 461 1220 6.23E-270 T 14-10-2018 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Gene3D G3DSA:2.160.20.60 1239 1510 2.3E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Pfam PF00310 Glutamine amidotransferases class-II 21 443 5.8E-186 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 SUPERFAMILY SSF56235 21 446 1.26E-151 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Pfam PF04898 Glutamate synthase central domain 472 756 4.3E-116 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 SUPERFAMILY SSF69336 1235 1498 1.57E-95 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Pfam PF01645 Conserved region in glutamate synthase 817 1187 1.4E-151 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VV1_0553 a16be19e1823948ecfe29b1c90ce059f 1512 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0649 ceccadcdc594a9f71a990c2a3d014f9d 935 Pfam PF07916 TraG-like protein, N-terminal region 4 452 2.1E-98 T 14-10-2018 IPR012931 TraG-like, N-terminal VV1_2910 10a0b4c4e33fa49b3b08c4b4bca4874e 243 Gene3D G3DSA:3.60.21.10 1 235 4.0E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV1_2910 10a0b4c4e33fa49b3b08c4b4bca4874e 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 122.201 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VV1_2910 10a0b4c4e33fa49b3b08c4b4bca4874e 243 SUPERFAMILY SSF56300 1 223 2.07E-33 T 14-10-2018 VV1_2910 10a0b4c4e33fa49b3b08c4b4bca4874e 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 2.4E-104 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VV1_2910 10a0b4c4e33fa49b3b08c4b4bca4874e 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.1E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV2_0207 cbb64fb954d8cc5b9d8ce7c1e54eaa9c 459 Pfam PF07690 Major Facilitator Superfamily 36 392 9.9E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0207 cbb64fb954d8cc5b9d8ce7c1e54eaa9c 459 Gene3D G3DSA:1.20.1250.20 242 443 4.2E-34 T 14-10-2018 VV2_0207 cbb64fb954d8cc5b9d8ce7c1e54eaa9c 459 SUPERFAMILY SSF103473 19 449 3.01E-63 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0207 cbb64fb954d8cc5b9d8ce7c1e54eaa9c 459 PIRSF PIRSF002808 9 454 2.4E-103 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VV2_0207 cbb64fb954d8cc5b9d8ce7c1e54eaa9c 459 Gene3D G3DSA:1.20.1250.20 21 219 5.6E-38 T 14-10-2018 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 Gene3D G3DSA:3.30.70.420 146 261 1.9E-111 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 SUPERFAMILY SSF55035 146 261 1.03E-36 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 52 419 5.0E-113 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 SUPERFAMILY SSF56542 26 409 3.53E-79 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 Gene3D G3DSA:3.90.770.10 92 406 1.9E-111 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 2.8E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 2.8E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 2.8E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 2.8E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 2.8E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV2_0117 3b6e7b63392e70d7e20995891ea9fec2 419 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 2.8E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 Pfam PF00230 Major intrinsic protein 5 251 2.7E-63 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 251 1.1E-68 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 Gene3D G3DSA:1.20.1080.10 2 259 7.6E-98 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 86 105 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 49 73 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 185 207 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 10 29 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 PRINTS PR00783 Major intrinsic protein family signature 152 170 6.0E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 ProSitePatterns PS00221 MIP family signature. 67 75 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VV1_1788 1955e8d086b63ee0d096c3f92892f78c 283 SUPERFAMILY SSF81338 8 253 2.09E-74 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VV2_1087 361d51f6d712191bd870130a1a970fd7 325 Pfam PF02274 Amidinotransferase 23 318 2.9E-62 T 14-10-2018 VV2_1087 361d51f6d712191bd870130a1a970fd7 325 Gene3D G3DSA:3.75.10.10 19 313 1.1E-43 T 14-10-2018 VV2_1087 361d51f6d712191bd870130a1a970fd7 325 PIRSF PIRSF028188 4 321 1.7E-151 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type VV2_1087 361d51f6d712191bd870130a1a970fd7 325 SUPERFAMILY SSF55909 19 313 1.07E-36 T 14-10-2018 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 3.5E-43 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 TIGRFAM TIGR00492 alr: alanine racemase 3 356 4.2E-129 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 Gene3D G3DSA:2.40.37.10 8 352 1.9E-132 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 Hamap MF_01201 Alanine racemase. 1 357 35.359 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 5.0E-69 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 120 132 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 26 42 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 339 352 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 287 304 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 155 166 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 60 78 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 192 219 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 249 264 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 PRINTS PR00992 Alanine racemase signature 266 281 1.3E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 Gene3D G3DSA:3.20.20.10 10 217 1.9E-132 T 14-10-2018 IPR029066 PLP-binding barrel VV1_1393 5832a22982cb411d5e4abd9165663b25 358 SMART SM01005 233 357 6.9E-70 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 SUPERFAMILY SSF51419 8 234 2.62E-69 T 14-10-2018 IPR029066 PLP-binding barrel VV1_1393 5832a22982cb411d5e4abd9165663b25 358 SUPERFAMILY SSF50621 227 356 8.72E-48 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VV1_1393 5832a22982cb411d5e4abd9165663b25 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 Gene3D G3DSA:1.10.1440.20 571 627 8.4E-10 T 14-10-2018 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 37 864 2.0E-286 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 11 866 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 276 289 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 147 160 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 369 383 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 473 486 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 214 229 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 411 422 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 200 213 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 171 179 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 PRINTS PR00415 Aconitase family signature 290 303 7.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 Gene3D G3DSA:3.30.499.20 16 367 1.6E-129 T 14-10-2018 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 SUPERFAMILY SSF53732 20 600 3.27E-185 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 Gene3D G3DSA:3.30.499.10 368 570 2.2E-77 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 Gene3D G3DSA:3.20.19.10 628 866 1.0E-83 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 Pfam PF00694 Aconitase C-terminal domain 665 796 1.2E-30 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 SUPERFAMILY SSF52016 607 865 6.08E-68 T 14-10-2018 VV1_2730 e81a83e24efc0d20827a3ff284467ff0 871 Pfam PF00330 Aconitase family (aconitate hydratase) 79 542 5.2E-145 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_1349 ee18edb1c1ea4336042f3de0eac2c693 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 1.1E-167 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VV1_1349 ee18edb1c1ea4336042f3de0eac2c693 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.2E-128 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VV1_1349 ee18edb1c1ea4336042f3de0eac2c693 335 PIRSF PIRSF004532 1 332 3.6E-135 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VV1_1349 ee18edb1c1ea4336042f3de0eac2c693 335 SUPERFAMILY SSF56655 1 324 1.22E-107 T 14-10-2018 VV1_1349 ee18edb1c1ea4336042f3de0eac2c693 335 Gene3D G3DSA:3.30.540.10 7 319 2.5E-125 T 14-10-2018 VV1_1349 ee18edb1c1ea4336042f3de0eac2c693 335 Gene3D G3DSA:3.40.190.90 109 276 2.5E-125 T 14-10-2018 VV2_0057 1ad02d98b5d883c0e9ca865721021cd1 114 Pfam PF04237 YjbR 17 103 1.1E-24 T 14-10-2018 IPR007351 Uncharacterised protein YjbR VV2_0057 1ad02d98b5d883c0e9ca865721021cd1 114 SUPERFAMILY SSF142906 1 114 4.71E-37 T 14-10-2018 IPR038056 YjbR-like superfamily VV2_0057 1ad02d98b5d883c0e9ca865721021cd1 114 Gene3D G3DSA:3.90.1150.30 2 114 1.9E-41 T 14-10-2018 IPR038056 YjbR-like superfamily VV2_0061 b40316fcbf20a3555b967f2de6283f0f 139 Gene3D G3DSA:3.40.1650.10 8 136 7.0E-37 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VV2_0061 b40316fcbf20a3555b967f2de6283f0f 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 5.5E-48 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VV2_0061 b40316fcbf20a3555b967f2de6283f0f 139 SUPERFAMILY SSF102546 1 139 2.22E-43 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VV2_0061 b40316fcbf20a3555b967f2de6283f0f 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.824 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 Gene3D G3DSA:1.10.3210.10 204 389 5.7E-24 T 14-10-2018 VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 Pfam PF00563 EAL domain 75 194 6.9E-12 T 14-10-2018 IPR001633 EAL domain VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 Pfam PF08668 HDOD domain 207 324 5.7E-14 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 PIRSF PIRSF003180 1 407 3.9E-171 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 SUPERFAMILY SSF109604 185 404 4.71E-42 T 14-10-2018 VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 SUPERFAMILY SSF141868 4 198 4.71E-28 T 14-10-2018 IPR035919 EAL domain superfamily VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 SMART SM00052 2 199 3.7E-4 T 14-10-2018 IPR001633 EAL domain VV1_1139 41f72ad6ff75ebdd716554e54a53043e 407 Gene3D G3DSA:3.20.20.450 45 203 5.3E-18 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 Pfam PF00089 Trypsin 39 330 3.7E-26 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 394 415 9.6E-5 T 14-10-2018 IPR020008 GlyGly-CTERM domain VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 SMART SM00020 30 330 4.2E-24 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 276 287 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 SUPERFAMILY SSF50494 22 336 9.8E-42 T 14-10-2018 IPR009003 Peptidase S1, PA clan VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 149 163 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 275 287 9.4E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV1_2745 a1c184c02f08cd933bb4eb36c7fe811d 418 Gene3D G3DSA:2.40.10.10 56 347 2.4E-41 T 14-10-2018 VV1_2209 9de5392459ae16e34af1d4e12efda711 587 Gene3D G3DSA:3.30.750.24 436 554 7.2E-20 T 14-10-2018 IPR036513 STAS domain superfamily VV1_2209 9de5392459ae16e34af1d4e12efda711 587 Pfam PF01740 STAS domain 447 539 1.6E-15 T 14-10-2018 IPR002645 STAS domain VV1_2209 9de5392459ae16e34af1d4e12efda711 587 Pfam PF00916 Sulfate permease family 24 383 6.5E-81 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VV1_2209 9de5392459ae16e34af1d4e12efda711 587 SUPERFAMILY SSF52091 446 536 3.73E-13 T 14-10-2018 IPR036513 STAS domain superfamily VV1_1947 c775fd835389e64bfcecbaa075d77ed8 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 8.7E-74 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VV1_1947 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV1_1947 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV1_1947 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV1_1947 c775fd835389e64bfcecbaa075d77ed8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 9.6E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV1_1947 c775fd835389e64bfcecbaa075d77ed8 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 3.0E-56 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 Gene3D G3DSA:3.40.50.2300 109 220 3.1E-40 T 14-10-2018 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 4.9E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 122 204 4.2E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 225 564 4.5E-140 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 SUPERFAMILY SSF52794 119 220 3.31E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 Gene3D G3DSA:3.40.50.2300 1 103 1.1E-25 T 14-10-2018 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 121 204 6.4E-36 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 SUPERFAMILY SSF52794 2 102 6.45E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV2_0198 9ec7079737249d61bf13fd81b76f00e7 575 Pfam PF02378 Phosphotransferase system, EIIC 245 508 2.0E-14 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 Gene3D G3DSA:3.40.190.10 162 260 9.2E-42 T 14-10-2018 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 Gene3D G3DSA:3.40.190.10 102 285 9.2E-42 T 14-10-2018 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 SUPERFAMILY SSF53850 92 291 2.35E-28 T 14-10-2018 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 Gene3D G3DSA:1.10.10.10 6 95 1.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1674 a9e93add75b14d225c58f42cf9132935 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1674 a9e93add75b14d225c58f42cf9132935 292 Pfam PF03466 LysR substrate binding domain 90 287 1.8E-27 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1674 a9e93add75b14d225c58f42cf9132935 292 SUPERFAMILY SSF46785 3 83 3.99E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1913 739b68b9b8fbbff4d382a03a3b8b93af 339 PIRSF PIRSF026343 4 339 2.3E-127 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VV1_1913 739b68b9b8fbbff4d382a03a3b8b93af 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 33.964 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC VV1_1913 739b68b9b8fbbff4d382a03a3b8b93af 339 Pfam PF06804 NlpB/DapX lipoprotein 36 335 9.7E-107 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein VV1_1913 739b68b9b8fbbff4d382a03a3b8b93af 339 Gene3D G3DSA:3.30.310.170 220 339 2.1E-42 T 14-10-2018 VV1_1913 739b68b9b8fbbff4d382a03a3b8b93af 339 Gene3D G3DSA:3.30.530.50 96 206 1.7E-11 T 14-10-2018 VV1_2539 74509694b909a57552f5be968b701d4a 209 Gene3D G3DSA:1.10.10.60 3 45 8.6E-7 T 14-10-2018 VV1_2539 74509694b909a57552f5be968b701d4a 209 Pfam PF13936 Helix-turn-helix domain 2 45 3.7E-16 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain VV2_1081 b873bc0208c6d8bbbd69569a0c434e3a 158 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_1081 b873bc0208c6d8bbbd69569a0c434e3a 158 Gene3D G3DSA:3.40.930.10 1 156 3.0E-48 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1081 b873bc0208c6d8bbbd69569a0c434e3a 158 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 4.2E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_1081 b873bc0208c6d8bbbd69569a0c434e3a 158 SUPERFAMILY SSF55804 5 152 1.83E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV1_2068 7fc911a1827e28a507b5b92f7358a309 448 SUPERFAMILY SSF48452 68 245 6.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Gene3D G3DSA:3.30.1360.40 236 332 6.0E-236 T 14-10-2018 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Gene3D G3DSA:3.90.199.10 33 520 6.0E-236 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Gene3D G3DSA:2.120.10.90 534 865 1.4E-123 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.7E-158 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 SMART SM00434 11 498 5.0E-302 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Gene3D G3DSA:1.10.268.10 369 492 6.0E-236 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.647 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 709 0.0 T 14-10-2018 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 SUPERFAMILY SSF101904 532 875 1.1E-105 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 SUPERFAMILY SSF56719 30 520 1.11E-187 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 4.3E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.8E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 8.8E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 709 0.64 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.2E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 1.6E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_3038 1cc9fb8f17bb294484dac900f77d1351 903 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 813 7.4E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VV1_1959 b68fba2e8c3c6483c7f0fbf63aa4b230 164 SUPERFAMILY SSF50341 14 158 4.97E-42 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV1_1959 b68fba2e8c3c6483c7f0fbf63aa4b230 164 SMART SM00260 16 153 9.2E-50 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_1959 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Pfam PF01584 CheW-like domain 20 156 2.5E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_1959 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Gene3D G3DSA:2.30.30.40 22 147 4.9E-43 T 14-10-2018 VV1_1959 b68fba2e8c3c6483c7f0fbf63aa4b230 164 Gene3D G3DSA:2.40.50.180 39 148 4.9E-43 T 14-10-2018 VV2_1244 20dd2f91ea6115ae8dd26126ef33a70a 319 Pfam PF15575 Immunity protein 49 94 293 2.8E-6 T 14-10-2018 IPR029074 Immunity protein 49 VV1_1484 f3d04e9b353e513734e8301bbc398c5f 102 Gene3D G3DSA:1.20.58.280 1 101 3.7E-34 T 14-10-2018 VV1_1484 f3d04e9b353e513734e8301bbc398c5f 102 SUPERFAMILY SSF46973 2 98 2.09E-33 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 VV1_1484 f3d04e9b353e513734e8301bbc398c5f 102 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 3.6E-33 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VV1_1484 f3d04e9b353e513734e8301bbc398c5f 102 PIRSF PIRSF000699 1 102 8.5E-37 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VV2_1129 90ff9264c131670d9350036bff7f4766 184 Pfam PF03358 NADPH-dependent FMN reductase 25 133 1.1E-12 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VV2_1129 90ff9264c131670d9350036bff7f4766 184 Gene3D G3DSA:3.40.50.360 1 184 2.0E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV2_1129 90ff9264c131670d9350036bff7f4766 184 SUPERFAMILY SSF52218 2 184 1.31E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV2_0869 ab914549f937c263c487bc17e9c6fd26 506 SUPERFAMILY SSF53720 14 497 4.71E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV2_0869 ab914549f937c263c487bc17e9c6fd26 506 Gene3D G3DSA:3.40.605.10 11 269 5.8E-90 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV2_0869 ab914549f937c263c487bc17e9c6fd26 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 2.3E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV2_0869 ab914549f937c263c487bc17e9c6fd26 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VV2_0869 ab914549f937c263c487bc17e9c6fd26 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VV2_0869 ab914549f937c263c487bc17e9c6fd26 506 Gene3D G3DSA:3.40.309.10 270 501 1.6E-75 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV2_1555 5f1a22a64e36358d61e797a2c68a3a7b 547 Pfam PF00672 HAMP domain 220 266 9.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_1555 5f1a22a64e36358d61e797a2c68a3a7b 547 SUPERFAMILY SSF58104 238 547 2.75E-68 T 14-10-2018 VV2_1555 5f1a22a64e36358d61e797a2c68a3a7b 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 512 4.4E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1555 5f1a22a64e36358d61e797a2c68a3a7b 547 SMART SM00283 278 546 1.7E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1555 5f1a22a64e36358d61e797a2c68a3a7b 547 Gene3D G3DSA:1.10.287.950 218 547 1.2E-68 T 14-10-2018 VV2_1555 5f1a22a64e36358d61e797a2c68a3a7b 547 SMART SM00304 218 270 1.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0224 fa2b6f56cc5df9da645106a8ea9df9cf 477 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 440 2.0E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0224 fa2b6f56cc5df9da645106a8ea9df9cf 477 Gene3D G3DSA:1.10.287.950 151 477 4.8E-65 T 14-10-2018 VV2_0224 fa2b6f56cc5df9da645106a8ea9df9cf 477 SMART SM00283 214 475 3.5E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0224 fa2b6f56cc5df9da645106a8ea9df9cf 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 235 264 2.8E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0224 fa2b6f56cc5df9da645106a8ea9df9cf 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 341 370 2.8E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0224 fa2b6f56cc5df9da645106a8ea9df9cf 477 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 312 339 2.8E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0224 fa2b6f56cc5df9da645106a8ea9df9cf 477 SUPERFAMILY SSF58104 166 476 4.58E-66 T 14-10-2018 VV2_0853 4643bbc05192f3bd10df48a7d550e3e0 191 Gene3D G3DSA:2.60.40.420 69 191 1.7E-18 T 14-10-2018 IPR008972 Cupredoxin VV2_0853 4643bbc05192f3bd10df48a7d550e3e0 191 SUPERFAMILY SSF49503 82 189 8.09E-23 T 14-10-2018 IPR008972 Cupredoxin VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 Gene3D G3DSA:1.10.1660.10 1 130 1.6E-35 T 14-10-2018 VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 Pfam PF09278 MerR, DNA binding 47 109 2.5E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.6E-65 T 14-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 SMART SM00422 2 71 1.4E-28 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 Pfam PF00376 MerR family regulatory protein 4 40 5.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.8E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.8E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.8E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VV1_1229 f9305061ee877795d7bbb06bf7d6c2e6 132 SUPERFAMILY SSF46955 2 121 1.68E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 Pfam PF12531 DNA-K related protein 685 932 5.1E-100 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 Pfam PF00012 Hsp70 protein 81 316 5.0E-18 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.3E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.3E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 3.3E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.3E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 SUPERFAMILY SSF53067 5 209 1.3E-31 T 14-10-2018 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 Gene3D G3DSA:3.30.420.40 219 261 3.2E-33 T 14-10-2018 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 Gene3D G3DSA:3.30.420.40 8 210 3.2E-33 T 14-10-2018 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 SUPERFAMILY SSF53067 223 456 3.35E-22 T 14-10-2018 VV1_2318 2c1981fb255d63c0ba6f1aeeab3bb898 935 Gene3D G3DSA:3.90.640.10 262 320 3.2E-33 T 14-10-2018 VV1_3169 927333212026255209a718ea19420268 329 Gene3D G3DSA:3.30.390.10 3 306 5.8E-116 T 14-10-2018 IPR029017 Enolase-like, N-terminal VV1_3169 927333212026255209a718ea19420268 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 9.4E-108 T 14-10-2018 VV1_3169 927333212026255209a718ea19420268 329 Gene3D G3DSA:3.20.20.120 100 301 5.8E-116 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VV1_3169 927333212026255209a718ea19420268 329 SUPERFAMILY SSF54826 1 101 9.03E-25 T 14-10-2018 VV1_3169 927333212026255209a718ea19420268 329 Pfam PF13378 Enolase C-terminal domain-like 126 278 5.6E-12 T 14-10-2018 IPR029065 Enolase C-terminal domain-like VV1_3169 927333212026255209a718ea19420268 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 327 21.447 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VV1_3169 927333212026255209a718ea19420268 329 SMART SM00922 117 214 1.8E-6 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VV1_3169 927333212026255209a718ea19420268 329 SUPERFAMILY SSF51604 103 316 2.36E-49 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VV1_0963 d29fc3e5cc8ff790a025d86aa8faef16 444 Gene3D G3DSA:3.20.20.70 203 419 2.6E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0963 d29fc3e5cc8ff790a025d86aa8faef16 444 SUPERFAMILY SSF51391 211 417 2.09E-60 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VV1_0963 d29fc3e5cc8ff790a025d86aa8faef16 444 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 224 411 2.6E-44 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VV1_0963 d29fc3e5cc8ff790a025d86aa8faef16 444 Pfam PF02581 Thiamine monophosphate synthase 222 400 3.0E-54 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VV1_0963 d29fc3e5cc8ff790a025d86aa8faef16 444 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 189 418 19.107 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VV1_2511 d5b8cba6905646c5c049f64223bf7dcc 257 Pfam PF04607 Region found in RelA / SpoT proteins 68 199 2.7E-26 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VV1_2511 d5b8cba6905646c5c049f64223bf7dcc 257 SUPERFAMILY SSF81301 37 232 8.5E-37 T 14-10-2018 VV1_2511 d5b8cba6905646c5c049f64223bf7dcc 257 SMART SM00954 68 202 2.2E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VV1_2511 d5b8cba6905646c5c049f64223bf7dcc 257 Gene3D G3DSA:3.30.460.10 18 183 1.8E-30 T 14-10-2018 VV1_0746 a7e1c65688b12c11eba96fb883cdc2dc 130 SUPERFAMILY SSF56047 2 129 4.97E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0746 a7e1c65688b12c11eba96fb883cdc2dc 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.189 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0746 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1490.10 73 130 1.2E-24 T 14-10-2018 VV1_0746 a7e1c65688b12c11eba96fb883cdc2dc 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0746 a7e1c65688b12c11eba96fb883cdc2dc 130 Gene3D G3DSA:3.30.1370.30 2 72 8.9E-27 T 14-10-2018 VV1_0746 a7e1c65688b12c11eba96fb883cdc2dc 130 Pfam PF00410 Ribosomal protein S8 5 129 7.4E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 Pfam PF00119 ATP synthase A chain 44 262 5.9E-58 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 SUPERFAMILY SSF81336 93 262 1.44E-49 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 1.6E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 1.6E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 1.6E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 2.6E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 Gene3D G3DSA:1.20.120.220 92 268 2.0E-66 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1015 a3a04a1257f441e3f14f7c50bb29c63e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.216 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1663 794c9e94c8cc4b2946075b2c37c2f82f 342 Pfam PF08402 TOBE domain 276 342 4.3E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VV1_1663 794c9e94c8cc4b2946075b2c37c2f82f 342 Pfam PF00005 ABC transporter 20 164 8.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1663 794c9e94c8cc4b2946075b2c37c2f82f 342 SMART SM00382 29 214 3.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1663 794c9e94c8cc4b2946075b2c37c2f82f 342 Gene3D G3DSA:3.40.50.300 1 240 5.1E-76 T 14-10-2018 VV1_1663 794c9e94c8cc4b2946075b2c37c2f82f 342 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1663 794c9e94c8cc4b2946075b2c37c2f82f 342 SUPERFAMILY SSF52540 5 242 1.5E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1663 794c9e94c8cc4b2946075b2c37c2f82f 342 SUPERFAMILY SSF50331 263 342 3.23E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VV2_0027 6cc401a40263a12faae4c2c4f93b7f27 370 Gene3D G3DSA:2.40.30.170 58 282 5.7E-77 T 14-10-2018 VV2_0027 6cc401a40263a12faae4c2c4f93b7f27 370 SUPERFAMILY SSF111369 63 277 5.89E-27 T 14-10-2018 VV2_0027 6cc401a40263a12faae4c2c4f93b7f27 370 Gene3D G3DSA:2.40.420.20 53 359 5.7E-77 T 14-10-2018 VV2_0027 6cc401a40263a12faae4c2c4f93b7f27 370 Gene3D G3DSA:2.40.50.100 72 205 5.7E-77 T 14-10-2018 VV2_0027 6cc401a40263a12faae4c2c4f93b7f27 370 Gene3D G3DSA:1.10.287.470 106 165 5.7E-77 T 14-10-2018 VV2_0027 6cc401a40263a12faae4c2c4f93b7f27 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 361 4.2E-67 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV2_0027 6cc401a40263a12faae4c2c4f93b7f27 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 274 3.4E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_2647 e36186619f0c34558629a594ba4b8bec 420 Pfam PF04403 Paraquat-inducible protein A 250 406 1.1E-47 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VV1_2647 e36186619f0c34558629a594ba4b8bec 420 Pfam PF04403 Paraquat-inducible protein A 56 207 2.5E-35 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like VV1_2647 e36186619f0c34558629a594ba4b8bec 420 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 404 5.8E-104 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VV1_2647 e36186619f0c34558629a594ba4b8bec 420 SUPERFAMILY SSF48695 202 239 6.64E-5 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV2_1045 8ccc18790635281466e77fe412dfa17c 89 Gene3D G3DSA:3.40.30.10 1 89 5.5E-26 T 14-10-2018 VV2_1045 8ccc18790635281466e77fe412dfa17c 89 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 6.2E-33 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 VV2_1045 8ccc18790635281466e77fe412dfa17c 89 Pfam PF00462 Glutaredoxin 4 63 1.1E-21 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV2_1045 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 60 73 3.4E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV2_1045 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 46 59 3.4E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV2_1045 8ccc18790635281466e77fe412dfa17c 89 PRINTS PR00160 Glutaredoxin signature 4 22 3.4E-11 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV2_1045 8ccc18790635281466e77fe412dfa17c 89 SUPERFAMILY SSF52833 3 84 3.31E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1045 8ccc18790635281466e77fe412dfa17c 89 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VV1_2974 778bd4546042f52c7be62a1aaed5cdeb 613 Gene3D G3DSA:3.10.105.10 329 546 1.6E-42 T 14-10-2018 VV1_2974 778bd4546042f52c7be62a1aaed5cdeb 613 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 491 1.5E-63 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV1_2974 778bd4546042f52c7be62a1aaed5cdeb 613 PIRSF PIRSF002741 3 572 6.9E-68 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV1_2974 778bd4546042f52c7be62a1aaed5cdeb 613 SUPERFAMILY SSF53850 45 566 1.79E-95 T 14-10-2018 VV1_2974 778bd4546042f52c7be62a1aaed5cdeb 613 Gene3D G3DSA:3.40.190.10 25 328 2.5E-45 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.4E-36 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.4E-36 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.4E-36 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.4E-36 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.4E-36 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.4E-36 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 3.5E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.8E-7 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.8E-7 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 91 108 9.8E-7 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 4.4E-86 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 Gene3D G3DSA:3.40.50.880 1 192 1.6E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 14-10-2018 VV1_1311 16ca82640e022bccad815ebbbae47bd8 192 SUPERFAMILY SSF52317 1 191 1.94E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 Gene3D G3DSA:3.40.50.300 258 498 6.7E-39 T 14-10-2018 VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 SUPERFAMILY SSF52540 244 490 1.16E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 SMART SM00382 284 479 2.0 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 SMART SM00382 34 221 3.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 Pfam PF00005 ABC transporter 25 174 4.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 Gene3D G3DSA:3.40.50.300 1 246 2.3E-54 T 14-10-2018 VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 Pfam PF00005 ABC transporter 276 430 2.3E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1325 cac58f414bdeaefccb5171742bfdbfe4 502 SUPERFAMILY SSF52540 8 229 1.11E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0161 6952b8538c1568528d53027f813e4498 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0161 6952b8538c1568528d53027f813e4498 130 PIRSF PIRSF000178 2 130 9.6E-33 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0161 6952b8538c1568528d53027f813e4498 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 1.1E-28 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0161 6952b8538c1568528d53027f813e4498 130 Gene3D G3DSA:1.20.1300.10 5 130 3.2E-44 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0161 6952b8538c1568528d53027f813e4498 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0161 6952b8538c1568528d53027f813e4498 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 1.2E-39 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_0161 6952b8538c1568528d53027f813e4498 130 SUPERFAMILY SSF81343 8 130 1.16E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VV1_1818 85b51e553b3e2f1128c29560f14b8df1 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 8.5E-52 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG VV1_0496 8c5a5dbe3bf02ecdba323306ba768fb0 328 SUPERFAMILY SSF51445 2 284 4.84E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_0496 8c5a5dbe3bf02ecdba323306ba768fb0 328 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 284 2.3E-81 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VV1_0496 8c5a5dbe3bf02ecdba323306ba768fb0 328 Gene3D G3DSA:3.20.20.300 1 327 8.2E-123 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VV1_0496 8c5a5dbe3bf02ecdba323306ba768fb0 328 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.465 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VV1_0496 8c5a5dbe3bf02ecdba323306ba768fb0 328 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VV2_0721 76218cfc86c74a303b78969997392c97 829 SUPERFAMILY SSF53706 38 698 1.31E-199 T 14-10-2018 VV2_0721 76218cfc86c74a303b78969997392c97 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VV2_0721 76218cfc86c74a303b78969997392c97 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VV2_0721 76218cfc86c74a303b78969997392c97 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 14-10-2018 VV2_0721 76218cfc86c74a303b78969997392c97 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 14-10-2018 VV2_0721 76218cfc86c74a303b78969997392c97 829 Gene3D G3DSA:2.40.40.20 705 828 6.5E-47 T 14-10-2018 VV2_0721 76218cfc86c74a303b78969997392c97 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 14-10-2018 VV2_0721 76218cfc86c74a303b78969997392c97 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 3.8E-88 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_0721 76218cfc86c74a303b78969997392c97 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_0721 76218cfc86c74a303b78969997392c97 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 8.8E-28 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VV2_0721 76218cfc86c74a303b78969997392c97 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.652 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VV2_0721 76218cfc86c74a303b78969997392c97 829 SUPERFAMILY SSF50692 688 828 5.18E-44 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VV2_0721 76218cfc86c74a303b78969997392c97 829 SMART SM00926 41 95 1.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 SUPERFAMILY SSF90123 15 326 4.32E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 SUPERFAMILY SSF52540 337 582 8.56E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 Gene3D G3DSA:1.20.1560.10 11 333 2.4E-84 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 Pfam PF00005 ABC transporter 363 511 8.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 Gene3D G3DSA:3.40.50.300 336 585 5.4E-94 T 14-10-2018 VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 2.0E-289 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 SMART SM00382 371 557 2.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0179 7f023060f4af72a5dea14b16d010fc3f 586 Pfam PF00664 ABC transporter transmembrane region 29 291 1.0E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV1_0036 2f6602eee964c435df17174bca92c6dc 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 4.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0036 2f6602eee964c435df17174bca92c6dc 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 4.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0036 2f6602eee964c435df17174bca92c6dc 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 4.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_0036 2f6602eee964c435df17174bca92c6dc 478 SMART SM00387 371 476 1.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0036 2f6602eee964c435df17174bca92c6dc 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 473 8.7E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_0036 2f6602eee964c435df17174bca92c6dc 478 Gene3D G3DSA:1.10.287.130 225 332 8.3E-17 T 14-10-2018 VV1_0036 2f6602eee964c435df17174bca92c6dc 478 SMART SM00304 221 273 2.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0036 2f6602eee964c435df17174bca92c6dc 478 SUPERFAMILY SSF55874 333 474 1.05E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0036 2f6602eee964c435df17174bca92c6dc 478 Gene3D G3DSA:3.30.565.10 335 476 1.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_0036 2f6602eee964c435df17174bca92c6dc 478 SUPERFAMILY SSF47384 258 322 1.47E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_1570 5caa6ea75068c2cc6256e3178310f3e3 426 SUPERFAMILY SSF56935 28 426 1.58E-17 T 14-10-2018 VV1_2190 63a28f35edf8c10432f1a82105f6cf4a 443 Pfam PF07804 HipA-like C-terminal domain 174 416 9.6E-46 T 14-10-2018 IPR012893 HipA-like, C-terminal VV1_2190 63a28f35edf8c10432f1a82105f6cf4a 443 Pfam PF13657 HipA N-terminal domain 8 117 1.0E-21 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 VV2_0486 7e5eeab0ca17c7da7ecf84bcb2e92939 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 234 6.1E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0486 7e5eeab0ca17c7da7ecf84bcb2e92939 248 Gene3D G3DSA:3.40.190.10 97 196 6.3E-22 T 14-10-2018 VV2_0486 7e5eeab0ca17c7da7ecf84bcb2e92939 248 Gene3D G3DSA:3.40.190.10 41 231 6.3E-22 T 14-10-2018 VV2_0486 7e5eeab0ca17c7da7ecf84bcb2e92939 248 SUPERFAMILY SSF53850 13 234 3.95E-32 T 14-10-2018 VV1_2305 514de298bde76d110b4c29a9e0ea9d40 723 Pfam PF02706 Chain length determinant protein 14 106 2.6E-6 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VV1_2305 514de298bde76d110b4c29a9e0ea9d40 723 Gene3D G3DSA:3.40.50.300 445 704 6.6E-29 T 14-10-2018 VV1_2305 514de298bde76d110b4c29a9e0ea9d40 723 Pfam PF13807 G-rich domain on putative tyrosine kinase 378 451 2.1E-9 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VV1_2305 514de298bde76d110b4c29a9e0ea9d40 723 SUPERFAMILY SSF52540 515 699 2.23E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0815 32cef699bd3263c9c6db61d971277156 247 SUPERFAMILY SSF52540 8 237 2.72E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0815 32cef699bd3263c9c6db61d971277156 247 PIRSF PIRSF039085 4 247 8.2E-88 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VV2_0815 32cef699bd3263c9c6db61d971277156 247 Pfam PF00005 ABC transporter 23 175 9.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0815 32cef699bd3263c9c6db61d971277156 247 Gene3D G3DSA:3.40.50.300 3 247 2.1E-71 T 14-10-2018 VV2_0815 32cef699bd3263c9c6db61d971277156 247 SMART SM00382 32 223 2.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0815 32cef699bd3263c9c6db61d971277156 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0744 daaa3ab88a31c0ee04775d685cefcddc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 7.4E-44 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0744 daaa3ab88a31c0ee04775d685cefcddc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 4.9E-43 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0744 daaa3ab88a31c0ee04775d685cefcddc 117 SUPERFAMILY SSF53137 3 115 1.66E-51 T 14-10-2018 VV1_0744 daaa3ab88a31c0ee04775d685cefcddc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.753 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0744 daaa3ab88a31c0ee04775d685cefcddc 117 Gene3D G3DSA:3.30.420.100 1 117 1.6E-43 T 14-10-2018 VV1_0883 948b78350db72dec2c4af9728548af9a 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 3.2E-44 T 14-10-2018 IPR012660 Thioesterase, putative VV1_0883 948b78350db72dec2c4af9728548af9a 308 Pfam PF00583 Acetyltransferase (GNAT) family 34 122 8.7E-11 T 14-10-2018 IPR000182 GNAT domain VV1_0883 948b78350db72dec2c4af9728548af9a 308 Gene3D G3DSA:3.40.630.30 3 145 6.4E-28 T 14-10-2018 VV1_0883 948b78350db72dec2c4af9728548af9a 308 SUPERFAMILY SSF55729 2 148 5.23E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_0883 948b78350db72dec2c4af9728548af9a 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.8E-52 T 14-10-2018 IPR012660 Thioesterase, putative VV1_0883 948b78350db72dec2c4af9728548af9a 308 Gene3D G3DSA:3.10.129.10 147 298 5.6E-46 T 14-10-2018 VV1_0883 948b78350db72dec2c4af9728548af9a 308 SUPERFAMILY SSF54637 154 296 7.07E-40 T 14-10-2018 IPR029069 HotDog domain superfamily VV2_0429 bd505caad08a4954150489b8aa8d10f7 159 Gene3D G3DSA:2.30.110.20 2 158 1.7E-33 T 14-10-2018 IPR036624 Hcp1-like superfamily VV2_0429 bd505caad08a4954150489b8aa8d10f7 159 SUPERFAMILY SSF141452 4 157 1.83E-35 T 14-10-2018 IPR036624 Hcp1-like superfamily VV2_0429 bd505caad08a4954150489b8aa8d10f7 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 4.1E-28 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp VV1_0863 8a62030b28d4c00c0a4db25ea7a53e41 212 Gene3D G3DSA:3.40.50.2020 106 212 2.8E-17 T 14-10-2018 VV1_0863 8a62030b28d4c00c0a4db25ea7a53e41 212 Pfam PF00156 Phosphoribosyl transferase domain 114 210 1.2E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV1_0863 8a62030b28d4c00c0a4db25ea7a53e41 212 SUPERFAMILY SSF53271 29 211 4.33E-38 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV2_0615 c0493e2886b5c203a8089c8b42dc8919 143 Pfam PF00583 Acetyltransferase (GNAT) family 36 117 4.6E-12 T 14-10-2018 IPR000182 GNAT domain VV2_0615 c0493e2886b5c203a8089c8b42dc8919 143 Gene3D G3DSA:3.40.630.30 35 139 1.9E-26 T 14-10-2018 VV2_0615 c0493e2886b5c203a8089c8b42dc8919 143 SUPERFAMILY SSF55729 32 139 1.69E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 Gene3D G3DSA:3.40.50.300 4 246 2.6E-55 T 14-10-2018 VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 196.083 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 Gene3D G3DSA:3.40.50.880 254 432 6.3E-19 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 6.1E-22 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 480 2.8E-153 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 SUPERFAMILY SSF52317 254 447 1.92E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 SUPERFAMILY SSF52540 7 241 8.41E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0330 818a1dc8135da9afd44a21dbd5572e8b 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 438 2.4E-57 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 Gene3D G3DSA:3.10.150.10 1 122 4.0E-42 T 14-10-2018 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 SUPERFAMILY SSF55979 126 244 9.42E-28 T 14-10-2018 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 Gene3D G3DSA:3.10.150.10 124 247 1.5E-36 T 14-10-2018 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 PIRSF PIRSF000804 1 366 7.0E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-38 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.7E-35 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 SUPERFAMILY SSF55979 1 118 1.79E-29 T 14-10-2018 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 Gene3D G3DSA:3.10.150.10 248 366 9.1E-39 T 14-10-2018 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.2E-38 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 SUPERFAMILY SSF55979 245 366 8.37E-36 T 14-10-2018 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 SMART SM00480 17 362 1.7E-145 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VV1_0998 d381c262198a082ce3ab3da55b2b282b 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.8E-108 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 Pfam PF01590 GAF domain 28 154 5.6E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 SUPERFAMILY SSF55073 169 318 2.43E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 Gene3D G3DSA:3.30.450.40 20 154 9.8E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 SUPERFAMILY SSF55781 28 158 3.71E-27 T 14-10-2018 VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 SMART SM00065 26 168 3.8E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 SMART SM00267 151 318 1.4E-39 T 14-10-2018 IPR000160 GGDEF domain VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 318 1.8E-36 T 14-10-2018 IPR000160 GGDEF domain VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 Gene3D G3DSA:3.30.70.270 155 321 3.5E-45 T 14-10-2018 VV2_1319 c5896fb4adeedbc4381fb2d92d27ee06 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 318 4.2E-37 T 14-10-2018 IPR000160 GGDEF domain VV1_2806 6fb2fa97579b3712df5e160f02ead2e8 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 431 2.9E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_2806 6fb2fa97579b3712df5e160f02ead2e8 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 427 6.8E-39 T 14-10-2018 IPR000160 GGDEF domain VV1_2806 6fb2fa97579b3712df5e160f02ead2e8 442 SUPERFAMILY SSF55073 280 430 1.33E-39 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2806 6fb2fa97579b3712df5e160f02ead2e8 442 Gene3D G3DSA:3.30.70.270 261 432 2.4E-48 T 14-10-2018 VV1_2806 6fb2fa97579b3712df5e160f02ead2e8 442 SMART SM00267 264 431 5.0E-49 T 14-10-2018 IPR000160 GGDEF domain VV1_2806 6fb2fa97579b3712df5e160f02ead2e8 442 SUPERFAMILY SSF49785 40 212 3.23E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV1_2806 6fb2fa97579b3712df5e160f02ead2e8 442 Gene3D G3DSA:2.60.120.430 31 213 6.6E-7 T 14-10-2018 VV1_0532 74f6af1168c9b09a9c0a8afca094b350 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.5E-137 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VV1_0532 74f6af1168c9b09a9c0a8afca094b350 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 4.2E-153 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VV1_1820 f55849b45eb664475c1851a2a0bbf3a6 103 PIRSF PIRSF003113 1 99 5.3E-38 T 14-10-2018 IPR002634 BolA protein VV1_1820 f55849b45eb664475c1851a2a0bbf3a6 103 Pfam PF01722 BolA-like protein 10 83 3.4E-31 T 14-10-2018 IPR002634 BolA protein VV1_1820 f55849b45eb664475c1851a2a0bbf3a6 103 SUPERFAMILY SSF82657 1 88 1.31E-32 T 14-10-2018 IPR036065 BolA-like superfamily VV1_1820 f55849b45eb664475c1851a2a0bbf3a6 103 Gene3D G3DSA:3.30.300.90 1 89 6.0E-35 T 14-10-2018 VV1_0369 ff87526c9298f92d330930bbe1a4291e 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 25.694 T 14-10-2018 IPR005346 RnfH protein VV1_0369 ff87526c9298f92d330930bbe1a4291e 117 Pfam PF03658 RnfH family Ubiquitin 8 90 4.0E-34 T 14-10-2018 IPR005346 RnfH protein VV1_0369 ff87526c9298f92d330930bbe1a4291e 117 Gene3D G3DSA:3.10.20.280 2 92 1.8E-33 T 14-10-2018 IPR037021 RnfH superfamily VV1_0369 ff87526c9298f92d330930bbe1a4291e 117 SUPERFAMILY SSF54285 6 82 2.05E-26 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VV1_1840 9dc3d77574279f2be778f51a1f634438 86 Gene3D G3DSA:2.30.170.50 1 84 1.5E-25 T 14-10-2018 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.5E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.093 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 SUPERFAMILY SSF143800 1 81 2.59E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.6E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.6E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.6E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1840 9dc3d77574279f2be778f51a1f634438 86 Pfam PF01197 Ribosomal protein L31 1 79 1.9E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_2339 96c66e8b51b6f1c4652c99af155ec23d 162 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 14 49 1.1E-4 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 Pfam PF00128 Alpha amylase, catalytic domain 200 251 6.3E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 SUPERFAMILY SSF81296 7 123 1.34E-23 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 Gene3D G3DSA:3.20.20.80 116 549 4.1E-140 T 14-10-2018 VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 1.0E-8 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 Gene3D G3DSA:2.60.40.1180 555 647 4.1E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 SUPERFAMILY SSF51011 556 647 5.04E-15 T 14-10-2018 VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 Gene3D G3DSA:2.60.40.10 3 114 9.6E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 SMART SM00642 133 539 6.8E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 628 7.8E-200 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 VV2_1226 989ec9e2b4ef7e03e08f111456d2726c 661 SUPERFAMILY SSF51445 112 542 7.6E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_1662 a4b3a6f79011e29fb0eeb229189ae63b 541 Gene3D G3DSA:1.10.3720.10 10 267 2.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1662 a4b3a6f79011e29fb0eeb229189ae63b 541 Gene3D G3DSA:1.10.3720.10 284 540 1.2E-33 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1662 a4b3a6f79011e29fb0eeb229189ae63b 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 5.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1662 a4b3a6f79011e29fb0eeb229189ae63b 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 537 3.8E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1662 a4b3a6f79011e29fb0eeb229189ae63b 541 SUPERFAMILY SSF161098 281 535 3.01E-38 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1662 a4b3a6f79011e29fb0eeb229189ae63b 541 SUPERFAMILY SSF161098 9 258 7.98E-44 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2896 032b8123a60733bba4755a92114feddb 394 PIRSF PIRSF000014 1 394 4.1E-162 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VV1_2896 032b8123a60733bba4755a92114feddb 394 Gene3D G3DSA:1.10.3820.10 15 192 1.0E-38 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VV1_2896 032b8123a60733bba4755a92114feddb 394 SUPERFAMILY SSF48695 13 187 9.53E-61 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV1_2896 032b8123a60733bba4755a92114feddb 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 5.9E-189 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VV1_2896 032b8123a60733bba4755a92114feddb 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 1.9E-72 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 Gene3D G3DSA:1.20.1640.10 98 271 4.6E-10 T 14-10-2018 VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 Pfam PF07549 SecD/SecF GG Motif 29 53 5.3E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 Pfam PF02355 Protein export membrane protein 101 256 2.3E-46 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 SUPERFAMILY SSF82866 112 252 1.2E-28 T 14-10-2018 VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 6.3E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 6.3E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 6.3E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 6.3E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV2_0743 a3909072543b955d9b417e49b34f0ab2 285 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 256 2.5E-55 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VV1_1773 b66c29ae329270f821cf960de3bd4770 352 Gene3D G3DSA:2.70.98.10 11 351 3.7E-113 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VV1_1773 b66c29ae329270f821cf960de3bd4770 352 Pfam PF01263 Aldose 1-epimerase 22 349 2.2E-86 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VV1_1773 b66c29ae329270f821cf960de3bd4770 352 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 350 5.9E-156 T 14-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VV1_1773 b66c29ae329270f821cf960de3bd4770 352 SUPERFAMILY SSF74650 8 350 1.13E-105 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VV1_1773 b66c29ae329270f821cf960de3bd4770 352 PIRSF PIRSF005096 3 352 2.1E-116 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VV1_1773 b66c29ae329270f821cf960de3bd4770 352 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VV1_2800 897e728615d891a3968814cd3239cf7f 781 SUPERFAMILY SSF52540 18 326 2.11E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2800 897e728615d891a3968814cd3239cf7f 781 SMART SM00487 1 174 1.8E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_2800 897e728615d891a3968814cd3239cf7f 781 Gene3D G3DSA:1.20.120.1080 356 450 1.0E-6 T 14-10-2018 VV1_2800 897e728615d891a3968814cd3239cf7f 781 Pfam PF00271 Helicase conserved C-terminal domain 195 314 1.1E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_2800 897e728615d891a3968814cd3239cf7f 781 Gene3D G3DSA:3.40.50.300 2 163 4.6E-42 T 14-10-2018 VV1_2800 897e728615d891a3968814cd3239cf7f 781 Pfam PF04408 Helicase associated domain (HA2) 373 444 3.6E-5 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VV1_2800 897e728615d891a3968814cd3239cf7f 781 Gene3D G3DSA:3.40.50.300 168 331 1.7E-43 T 14-10-2018 VV1_2800 897e728615d891a3968814cd3239cf7f 781 SMART SM00847 372 460 0.0083 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 VV1_2800 897e728615d891a3968814cd3239cf7f 781 Pfam PF00270 DEAD/DEAH box helicase 13 153 1.1E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_2800 897e728615d891a3968814cd3239cf7f 781 SMART SM00490 219 315 2.7E-14 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0589 b4c1d480278faa2dc3afb530a5c636cf 603 Gene3D G3DSA:3.40.50.2300 369 597 4.9E-61 T 14-10-2018 VV1_0589 b4c1d480278faa2dc3afb530a5c636cf 603 SUPERFAMILY SSF53822 258 600 9.89E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_0589 b4c1d480278faa2dc3afb530a5c636cf 603 Pfam PF04348 LppC putative lipoprotein 40 601 5.6E-156 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VV1_0589 b4c1d480278faa2dc3afb530a5c636cf 603 Gene3D G3DSA:3.40.50.2300 261 596 4.9E-61 T 14-10-2018 VV1_0589 b4c1d480278faa2dc3afb530a5c636cf 603 Gene3D G3DSA:1.25.40.10 24 146 1.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0589 b4c1d480278faa2dc3afb530a5c636cf 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 27.628 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA VV1_0589 b4c1d480278faa2dc3afb530a5c636cf 603 Gene3D G3DSA:1.25.40.650 149 254 5.5E-16 T 14-10-2018 VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 PIRSF PIRSF002808 5 453 6.8E-168 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 3.1E-150 T 14-10-2018 VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 Gene3D G3DSA:1.20.1250.20 19 227 1.6E-57 T 14-10-2018 VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 SUPERFAMILY SSF103473 18 451 5.49E-87 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 Gene3D G3DSA:1.20.1250.20 241 452 4.8E-62 T 14-10-2018 VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 Pfam PF07690 Major Facilitator Superfamily 34 401 4.7E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0405 5db7b82ab15f6f92af1cd4ca95bcdd6f 458 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 9.2E-233 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 VV2_0244 c9683bb3cb60dea76bd739475b039685 121 Pfam PF12680 SnoaL-like domain 13 116 9.5E-8 T 14-10-2018 IPR037401 SnoaL-like domain VV2_0244 c9683bb3cb60dea76bd739475b039685 121 Gene3D G3DSA:3.10.450.50 6 120 6.7E-30 T 14-10-2018 VV2_0244 c9683bb3cb60dea76bd739475b039685 121 SUPERFAMILY SSF54427 6 119 8.4E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily VV2_0244 c9683bb3cb60dea76bd739475b039685 121 PIRSF PIRSF030561 5 121 2.7E-46 T 14-10-2018 IPR008317 Uncharacterised conserved protein UCP030561 VV1_1437 eedc914c18997954946b19480c844f09 282 SUPERFAMILY SSF52540 5 261 2.68E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1437 eedc914c18997954946b19480c844f09 282 Pfam PF13401 AAA domain 42 168 1.5E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1437 eedc914c18997954946b19480c844f09 282 Gene3D G3DSA:3.40.50.300 29 183 2.3E-10 T 14-10-2018 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 Pfam PF00664 ABC transporter transmembrane region 171 437 1.9E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 Gene3D G3DSA:1.20.1560.10 156 469 4.6E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 Pfam PF03412 Peptidase C39 family 49 148 1.1E-5 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 45 718 1.2E-242 T 14-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 SUPERFAMILY SSF90123 156 467 1.83E-63 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 ProSitePatterns PS00211 ABC transporters family signature. 619 633 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 SUPERFAMILY SSF52540 474 717 1.95E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 Gene3D G3DSA:3.40.50.300 472 727 1.1E-90 T 14-10-2018 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 Pfam PF00005 ABC transporter 499 647 5.1E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 Gene3D G3DSA:3.90.70.10 33 155 4.2E-11 T 14-10-2018 VV2_0482 87a75521aae1c21184f3d552d82d3e14 727 SMART SM00382 507 693 2.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2573 85cb8e5af420cd4003592c5a40835c95 195 SUPERFAMILY SSF53448 8 188 4.51E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2573 85cb8e5af420cd4003592c5a40835c95 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 1.6E-33 T 14-10-2018 IPR025877 MobA-like NTP transferase VV1_2573 85cb8e5af420cd4003592c5a40835c95 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 187 8.6E-75 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VV1_2573 85cb8e5af420cd4003592c5a40835c95 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.015 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VV1_2573 85cb8e5af420cd4003592c5a40835c95 195 Gene3D G3DSA:3.90.550.10 6 192 3.6E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2888 8234092ca960cf0b9c3c8aefcc796c2e 301 SUPERFAMILY SSF64182 1 297 9.03E-67 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VV1_2888 8234092ca960cf0b9c3c8aefcc796c2e 301 Pfam PF02833 DHHA2 domain 180 297 2.6E-14 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VV1_2888 8234092ca960cf0b9c3c8aefcc796c2e 301 Pfam PF01368 DHH family 2 142 8.6E-22 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VV1_2888 8234092ca960cf0b9c3c8aefcc796c2e 301 Gene3D G3DSA:3.90.1640.10 1 186 7.2E-64 T 14-10-2018 VV1_2888 8234092ca960cf0b9c3c8aefcc796c2e 301 SMART SM01131 178 300 2.2E-30 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VV1_2888 8234092ca960cf0b9c3c8aefcc796c2e 301 Gene3D G3DSA:3.10.310.20 188 300 2.5E-20 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VV2_1633 a9c3dd5308733484d81acb0616fda4d1 429 Gene3D G3DSA:2.70.70.10 266 397 2.0E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif VV2_1633 a9c3dd5308733484d81acb0616fda4d1 429 Gene3D G3DSA:3.10.450.350 161 265 2.3E-33 T 14-10-2018 VV2_1633 a9c3dd5308733484d81acb0616fda4d1 429 SUPERFAMILY SSF51261 145 392 9.94E-68 T 14-10-2018 IPR011055 Duplicated hybrid motif VV2_1633 a9c3dd5308733484d81acb0616fda4d1 429 Pfam PF04225 Opacity-associated protein A LysM-like domain 74 156 6.6E-8 T 14-10-2018 IPR007340 Opacity-associated protein A VV2_1633 a9c3dd5308733484d81acb0616fda4d1 429 Gene3D G3DSA:3.10.450.350 68 160 7.6E-32 T 14-10-2018 VV2_1633 a9c3dd5308733484d81acb0616fda4d1 429 Pfam PF01551 Peptidase family M23 296 390 1.1E-30 T 14-10-2018 IPR016047 Peptidase M23 VV2_0538 b52ae74a221c7d54f1d9e2ab12e619a5 635 SUPERFAMILY SSF53300 382 562 7.87E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0538 b52ae74a221c7d54f1d9e2ab12e619a5 635 Gene3D G3DSA:3.40.50.410 379 567 1.9E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_1461 169190f4030f6658873fcc1d279f4833 179 Pfam PF13689 Domain of unknown function (DUF4154) 35 171 3.5E-23 T 14-10-2018 IPR025293 YfiR-like VV1_2648 f40c081f8a154e4b505e066b4423404c 885 Pfam PF02470 MlaD protein 47 138 7.7E-14 T 14-10-2018 IPR003399 Mce/MlaD VV1_2648 f40c081f8a154e4b505e066b4423404c 885 Pfam PF02470 MlaD protein 399 470 2.5E-6 T 14-10-2018 IPR003399 Mce/MlaD VV1_2648 f40c081f8a154e4b505e066b4423404c 885 Pfam PF02470 MlaD protein 283 374 1.1E-6 T 14-10-2018 IPR003399 Mce/MlaD VV1_2648 f40c081f8a154e4b505e066b4423404c 885 Pfam PF02470 MlaD protein 756 832 1.3E-6 T 14-10-2018 IPR003399 Mce/MlaD VV1_2648 f40c081f8a154e4b505e066b4423404c 885 Pfam PF02470 MlaD protein 163 223 1.1E-6 T 14-10-2018 IPR003399 Mce/MlaD VV2_0173 bfa4476fb009235a252b98cc2216fd5a 305 Gene3D G3DSA:3.40.190.10 161 262 6.9E-61 T 14-10-2018 VV2_0173 bfa4476fb009235a252b98cc2216fd5a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0173 bfa4476fb009235a252b98cc2216fd5a 305 SUPERFAMILY SSF53850 88 299 4.62E-41 T 14-10-2018 VV2_0173 bfa4476fb009235a252b98cc2216fd5a 305 Gene3D G3DSA:1.10.10.10 2 86 3.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0173 bfa4476fb009235a252b98cc2216fd5a 305 SUPERFAMILY SSF46785 3 110 1.25E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0173 bfa4476fb009235a252b98cc2216fd5a 305 Gene3D G3DSA:3.40.190.10 90 292 6.9E-61 T 14-10-2018 VV2_0173 bfa4476fb009235a252b98cc2216fd5a 305 Pfam PF03466 LysR substrate binding domain 86 295 5.5E-40 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0252 b09446c7458d140222c53fe241b126d7 291 Gene3D G3DSA:1.10.8.10 5 90 1.8E-26 T 14-10-2018 VV1_0252 b09446c7458d140222c53fe241b126d7 291 Gene3D G3DSA:3.40.50.150 91 282 4.9E-59 T 14-10-2018 VV1_0252 b09446c7458d140222c53fe241b126d7 291 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.001 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VV1_0252 b09446c7458d140222c53fe241b126d7 291 Pfam PF13847 Methyltransferase domain 116 247 2.4E-16 T 14-10-2018 IPR025714 Methyltransferase domain VV1_0252 b09446c7458d140222c53fe241b126d7 291 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 281 2.5E-81 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VV1_0252 b09446c7458d140222c53fe241b126d7 291 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 7.2E-93 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VV1_0252 b09446c7458d140222c53fe241b126d7 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_0252 b09446c7458d140222c53fe241b126d7 291 SUPERFAMILY SSF53335 9 279 9.39E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_3086 f67dc53443c6134e35583f79e95bc03c 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.017 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_3086 f67dc53443c6134e35583f79e95bc03c 159 Pfam PF01967 MoaC family 15 150 1.9E-55 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_3086 f67dc53443c6134e35583f79e95bc03c 159 Gene3D G3DSA:3.30.70.640 1 159 6.1E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_3086 f67dc53443c6134e35583f79e95bc03c 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 5.0E-72 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_3086 f67dc53443c6134e35583f79e95bc03c 159 SUPERFAMILY SSF55040 11 155 3.4E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VV1_1527 345b1d38449b8b0ce983407a797cbd99 368 Gene3D G3DSA:3.40.50.300 99 355 1.0E-87 T 14-10-2018 VV1_1527 345b1d38449b8b0ce983407a797cbd99 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 5.8E-127 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VV1_1527 345b1d38449b8b0ce983407a797cbd99 368 SUPERFAMILY SSF52540 3 334 2.3E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1527 345b1d38449b8b0ce983407a797cbd99 368 Pfam PF00437 Type II/IV secretion system protein 103 267 7.6E-37 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_1527 345b1d38449b8b0ce983407a797cbd99 368 Gene3D G3DSA:3.30.450.90 1 97 4.4E-23 T 14-10-2018 VV1_0063 0db398c0868bfeb1a0edf4b080a7023a 224 Pfam PF00589 Phage integrase family 29 206 1.5E-6 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_0063 0db398c0868bfeb1a0edf4b080a7023a 224 Gene3D G3DSA:1.10.443.10 19 216 5.1E-20 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_0063 0db398c0868bfeb1a0edf4b080a7023a 224 SUPERFAMILY SSF56349 3 206 4.12E-16 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV2_0805 2035bfa1b3d86c120405ca96dd5956de 215 Pfam PF07819 PGAP1-like protein 60 166 3.4E-6 T 14-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 VV2_0805 2035bfa1b3d86c120405ca96dd5956de 215 SUPERFAMILY SSF53474 8 194 2.86E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_1097 1cd96d88e4d6a95db6b956e4adb6e5c0 298 SMART SM00448 1 115 2.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1097 1cd96d88e4d6a95db6b956e4adb6e5c0 298 Gene3D G3DSA:3.40.50.12740 1 240 8.1E-31 T 14-10-2018 VV1_1097 1cd96d88e4d6a95db6b956e4adb6e5c0 298 Pfam PF00072 Response regulator receiver domain 3 115 2.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1097 1cd96d88e4d6a95db6b956e4adb6e5c0 298 SUPERFAMILY SSF52172 2 127 4.41E-30 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0810 adea14829661c424871b2442daad3a32 380 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 4.0E-81 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV1_0810 adea14829661c424871b2442daad3a32 380 SUPERFAMILY SSF53383 19 378 1.53E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_0810 adea14829661c424871b2442daad3a32 380 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 8.5E-165 T 14-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family VV1_0810 adea14829661c424871b2442daad3a32 380 Gene3D G3DSA:3.40.640.10 4 275 1.9E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_0810 adea14829661c424871b2442daad3a32 380 PIRSF PIRSF000390 15 379 1.0E-86 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VV1_0810 adea14829661c424871b2442daad3a32 380 Gene3D G3DSA:3.90.1150.10 277 379 1.6E-16 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_1910 5321e9f758ace70cb25cfd849603c6a0 156 Gene3D G3DSA:3.40.30.10 2 155 7.0E-46 T 14-10-2018 VV1_1910 5321e9f758ace70cb25cfd849603c6a0 156 PIRSF PIRSF000239 1 147 4.5E-18 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV1_1910 5321e9f758ace70cb25cfd849603c6a0 156 Pfam PF00578 AhpC/TSA family 7 134 1.4E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV1_1910 5321e9f758ace70cb25cfd849603c6a0 156 SUPERFAMILY SSF52833 3 154 1.11E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1673 c3127a8cd076945991671d282c1cee8a 490 SUPERFAMILY SSF51905 39 331 8.77E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1673 c3127a8cd076945991671d282c1cee8a 490 Pfam PF01266 FAD dependent oxidoreductase 53 417 7.3E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV2_1673 c3127a8cd076945991671d282c1cee8a 490 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 28 488 8.3E-236 T 14-10-2018 IPR017715 Putative aminophosphonate oxidoreductase VV2_1673 c3127a8cd076945991671d282c1cee8a 490 Gene3D G3DSA:3.30.9.10 147 378 2.7E-59 T 14-10-2018 VV2_1673 c3127a8cd076945991671d282c1cee8a 490 Gene3D G3DSA:3.50.50.60 53 419 2.7E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1374 5ae3af5b2885899a0cffcb1c516fb900 198 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 3.6E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_1374 5ae3af5b2885899a0cffcb1c516fb900 198 Pfam PF06961 Protein of unknown function (DUF1294) 108 162 1.4E-23 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 VV2_1374 5ae3af5b2885899a0cffcb1c516fb900 198 Gene3D G3DSA:2.40.50.140 1 71 3.8E-16 T 14-10-2018 VV2_1374 5ae3af5b2885899a0cffcb1c516fb900 198 SUPERFAMILY SSF50249 3 69 5.63E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_1374 5ae3af5b2885899a0cffcb1c516fb900 198 SMART SM00357 4 68 1.4E-6 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV1_1119 e54538920f7349eb17616f8d0d7f58f7 393 SMART SM00028 327 360 0.0056 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_1119 e54538920f7349eb17616f8d0d7f58f7 393 Pfam PF07719 Tetratricopeptide repeat 327 355 5.1E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 VV1_1119 e54538920f7349eb17616f8d0d7f58f7 393 Pfam PF07219 HemY protein N-terminus 26 132 3.9E-26 T 14-10-2018 IPR010817 HemY, N-terminal VV1_1119 e54538920f7349eb17616f8d0d7f58f7 393 SUPERFAMILY SSF48452 85 294 3.29E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1119 e54538920f7349eb17616f8d0d7f58f7 393 SUPERFAMILY SSF48452 252 392 3.13E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1119 e54538920f7349eb17616f8d0d7f58f7 393 Gene3D G3DSA:1.25.40.10 152 393 1.1E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1119 e54538920f7349eb17616f8d0d7f58f7 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 3.0E-113 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VV1_1623 74d9ec864a15231923b3d2867aa2a413 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 7.1E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VV1_1623 74d9ec864a15231923b3d2867aa2a413 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 7.1E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VV1_1623 74d9ec864a15231923b3d2867aa2a413 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 7.1E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VV1_1623 74d9ec864a15231923b3d2867aa2a413 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 7.1E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VV1_1623 74d9ec864a15231923b3d2867aa2a413 289 Gene3D G3DSA:1.20.120.1220 124 284 3.5E-5 T 14-10-2018 VV1_1623 74d9ec864a15231923b3d2867aa2a413 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 2.3E-34 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal VV1_1623 74d9ec864a15231923b3d2867aa2a413 289 Pfam PF01478 Type IV leader peptidase family 137 244 2.9E-27 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VV1_0172 1b729dd4f4be99cff4b0e590f6138b03 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 7.4E-18 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 Gene3D G3DSA:1.10.10.10 128 227 3.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 SUPERFAMILY SSF46894 125 225 1.33E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 SMART SM00862 148 224 1.8E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 SMART SM00448 2 111 1.0E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 Gene3D G3DSA:3.40.50.2300 1 127 7.9E-38 T 14-10-2018 VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 SUPERFAMILY SSF52172 1 123 3.27E-39 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1254 b105bd89f91e36351fa9bb4fcd252f1a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 6.4E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_0164 789e767016432b6b94bc3105955922b8 356 Pfam PF13432 Tetratricopeptide repeat 186 239 7.3E-8 T 14-10-2018 VV2_0164 789e767016432b6b94bc3105955922b8 356 SUPERFAMILY SSF48452 170 284 2.75E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0164 789e767016432b6b94bc3105955922b8 356 SMART SM00028 206 239 0.64 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0164 789e767016432b6b94bc3105955922b8 356 SMART SM00028 172 205 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0164 789e767016432b6b94bc3105955922b8 356 SMART SM00028 240 273 350.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0164 789e767016432b6b94bc3105955922b8 356 Gene3D G3DSA:1.25.40.10 91 337 3.8E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1672 2773522c5d1b5714c3036eab634db23e 300 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 2.1E-123 T 14-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative VV2_1672 2773522c5d1b5714c3036eab634db23e 300 Pfam PF00892 EamA-like transporter family 5 136 3.5E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1672 2773522c5d1b5714c3036eab634db23e 300 Pfam PF00892 EamA-like transporter family 153 300 2.8E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1672 2773522c5d1b5714c3036eab634db23e 300 SUPERFAMILY SSF103481 41 138 9.55E-9 T 14-10-2018 VV2_1672 2773522c5d1b5714c3036eab634db23e 300 SUPERFAMILY SSF103481 201 298 3.27E-8 T 14-10-2018 VV1_1366 10ce6e4ad02671c37fca7ae5a9dfe88d 297 SUPERFAMILY SSF51730 22 294 7.65E-96 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like VV1_1366 10ce6e4ad02671c37fca7ae5a9dfe88d 297 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 2.3E-101 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VV1_1366 10ce6e4ad02671c37fca7ae5a9dfe88d 297 Gene3D G3DSA:3.20.20.220 1 297 6.2E-113 T 14-10-2018 VV1_1366 10ce6e4ad02671c37fca7ae5a9dfe88d 297 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 3.7E-102 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 VV1_3080 4717e3accee23ba3c9513c9d09c735ae 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 300 1.9E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_3080 4717e3accee23ba3c9513c9d09c735ae 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 71 8.9E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VV1_3080 4717e3accee23ba3c9513c9d09c735ae 302 Gene3D G3DSA:1.10.3720.10 98 298 2.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily VV1_3080 4717e3accee23ba3c9513c9d09c735ae 302 SUPERFAMILY SSF161098 99 283 8.76E-27 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1997 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.60.20.10 2 411 1.6E-159 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_1997 971428b54437116d6d18dbfbfa09db30 504 Pfam PF00156 Phosphoribosyl transferase domain 280 391 2.5E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV1_1997 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF53271 249 482 3.15E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV1_1997 971428b54437116d6d18dbfbfa09db30 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 3.5E-17 T 14-10-2018 VV1_1997 971428b54437116d6d18dbfbfa09db30 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.854 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VV1_1997 971428b54437116d6d18dbfbfa09db30 504 SUPERFAMILY SSF56235 2 256 7.98E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_1997 971428b54437116d6d18dbfbfa09db30 504 PIRSF PIRSF000485 1 480 3.5E-170 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VV1_1997 971428b54437116d6d18dbfbfa09db30 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 2.2E-165 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VV1_1997 971428b54437116d6d18dbfbfa09db30 504 Gene3D G3DSA:3.40.50.2020 276 440 1.6E-159 T 14-10-2018 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 Pfam PF13377 Periplasmic binding protein-like domain 165 326 4.1E-34 T 14-10-2018 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 SUPERFAMILY SSF53822 58 328 1.67E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 SUPERFAMILY SSF47413 1 53 3.94E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 Gene3D G3DSA:3.40.50.2300 156 286 6.5E-71 T 14-10-2018 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 14-10-2018 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 Gene3D G3DSA:1.10.260.40 1 55 1.0E-18 T 14-10-2018 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 SMART SM00354 1 68 9.0E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 Gene3D G3DSA:3.40.50.2300 60 299 6.5E-71 T 14-10-2018 VV2_1060 d0aae19b4f75d7ab7e1f86b9c7f89db3 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 44 3.1E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_3163 e806284b7b93571f7e8ee034d5aa7778 289 Pfam PF04280 Tim44-like domain 167 288 2.0E-14 T 14-10-2018 IPR007379 Tim44-like domain VV1_3163 e806284b7b93571f7e8ee034d5aa7778 289 Pfam PF07466 Protein of unknown function (DUF1517) 28 124 1.4E-5 T 14-10-2018 IPR010903 Protein of unknown function DUF1517 VV1_3163 e806284b7b93571f7e8ee034d5aa7778 289 Gene3D G3DSA:3.10.450.240 164 288 1.3E-7 T 14-10-2018 VV1_3163 e806284b7b93571f7e8ee034d5aa7778 289 SUPERFAMILY SSF54427 168 288 1.75E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily VV1_3163 e806284b7b93571f7e8ee034d5aa7778 289 SMART SM00978 158 289 2.0E-35 T 14-10-2018 IPR007379 Tim44-like domain VV1_2659 ab1d97c6fc1276fd4c0608996dbe4db0 280 PRINTS PR01021 OMPA domain signature 209 225 3.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2659 ab1d97c6fc1276fd4c0608996dbe4db0 280 PRINTS PR01021 OMPA domain signature 194 209 3.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2659 ab1d97c6fc1276fd4c0608996dbe4db0 280 PRINTS PR01021 OMPA domain signature 164 186 3.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2659 ab1d97c6fc1276fd4c0608996dbe4db0 280 SUPERFAMILY SSF103088 153 264 7.06E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2659 ab1d97c6fc1276fd4c0608996dbe4db0 280 Pfam PF00691 OmpA family 164 258 8.0E-22 T 14-10-2018 IPR006665 OmpA-like domain VV1_2659 ab1d97c6fc1276fd4c0608996dbe4db0 280 Gene3D G3DSA:3.30.1330.60 145 271 5.2E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 SUPERFAMILY SSF51726 396 758 1.12E-114 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 2.2E-119 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.972 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 PIRSF PIRSF000382 2 763 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 SUPERFAMILY SSF51726 5 393 8.37E-109 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 4.9E-151 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VV1_2219 a58a116b47a5a4da3748bf24fb9a84f2 778 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VV2_0366 36baab99f55dcea8970421af6301ebec 143 Pfam PF13778 Domain of unknown function (DUF4174) 21 133 5.9E-27 T 14-10-2018 IPR025232 Domain of unknown function DUF4174 VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 SUPERFAMILY SSF102114 12 450 4.19E-143 T 14-10-2018 VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 Pfam PF06969 HemN C-terminal domain 369 437 7.5E-11 T 14-10-2018 IPR010723 HemN, C-terminal VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 PIRSF PIRSF000167 9 460 1.5E-172 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 Gene3D G3DSA:1.10.10.920 371 463 4.5E-34 T 14-10-2018 VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 Pfam PF04055 Radical SAM superfamily 63 234 2.7E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 Gene3D G3DSA:3.80.30.20 7 369 3.5E-137 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 1.3E-207 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VV1_0894 ed000a93b1822bc142358c9204fd7e9b 463 SMART SM00729 58 278 3.3E-51 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV2_0976 399bdf141a25a151f58c698d2f3d04ef 82 SUPERFAMILY SSF101744 1 81 4.76E-23 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VV2_0976 399bdf141a25a151f58c698d2f3d04ef 82 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 3.4E-29 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VV2_0976 399bdf141a25a151f58c698d2f3d04ef 82 Gene3D G3DSA:2.30.30.400 2 80 2.9E-15 T 14-10-2018 IPR038626 Rof-like superfamily VV1_2781 13904ea369a23e16a6ac0fe865e0e997 254 Pfam PF00005 ABC transporter 14 167 1.3E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2781 13904ea369a23e16a6ac0fe865e0e997 254 SMART SM00382 21 216 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2781 13904ea369a23e16a6ac0fe865e0e997 254 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 254 42.232 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VV1_2781 13904ea369a23e16a6ac0fe865e0e997 254 Gene3D G3DSA:3.40.50.300 10 254 9.6E-53 T 14-10-2018 VV1_2781 13904ea369a23e16a6ac0fe865e0e997 254 SUPERFAMILY SSF52540 15 228 1.17E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2822 12af7db56c1911da708b16b79cd6f9fe 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 2.0E-87 T 14-10-2018 IPR005642 Lysine exporter LysO VV1_2822 12af7db56c1911da708b16b79cd6f9fe 301 Pfam PF03956 Lysine exporter LysO 112 297 2.9E-52 T 14-10-2018 IPR005642 Lysine exporter LysO VV1_1129 85330a480c5d31df271122ab9bf297c2 316 SUPERFAMILY SSF56349 116 302 2.65E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_1129 85330a480c5d31df271122ab9bf297c2 316 Pfam PF00589 Phage integrase family 122 290 3.5E-49 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_1129 85330a480c5d31df271122ab9bf297c2 316 Gene3D G3DSA:1.10.443.10 121 298 6.6E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_1129 85330a480c5d31df271122ab9bf297c2 316 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 55.442 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VV1_1129 85330a480c5d31df271122ab9bf297c2 316 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 19 306 2.1E-107 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 VV1_1129 85330a480c5d31df271122ab9bf297c2 316 SUPERFAMILY SSF47823 16 107 1.0E-12 T 14-10-2018 VV1_1129 85330a480c5d31df271122ab9bf297c2 316 Gene3D G3DSA:1.10.150.130 14 108 9.8E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VV1_1129 85330a480c5d31df271122ab9bf297c2 316 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 4.3E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV2_0637 d011b8d00b36f673bdbde812402fb4a9 393 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 27 258 2.1E-39 T 14-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.3E-142 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 SUPERFAMILY SSF47323 316 459 5.1E-40 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.3E-192 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.291 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 SMART SM00840 341 402 2.4E-27 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 Pfam PF09190 DALR domain 341 402 2.4E-24 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 Gene3D G3DSA:3.40.50.620 1 305 8.2E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 Gene3D G3DSA:1.20.120.640 306 460 1.0E-51 T 14-10-2018 VV1_2908 0df61a2e218713a6858eefe5b2bf0e40 460 SUPERFAMILY SSF52374 1 313 1.61E-104 T 14-10-2018 VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 Hamap MF_00201 DNA repair protein RecO [recO]. 4 233 22.694 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 SUPERFAMILY SSF57863 89 168 1.46E-11 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 SUPERFAMILY SSF50249 8 78 1.71E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 Gene3D G3DSA:2.40.50.140 5 81 3.4E-32 T 14-10-2018 VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 Gene3D G3DSA:1.20.1440.120 82 242 4.8E-53 T 14-10-2018 VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 Pfam PF11967 Recombination protein O N terminal 8 79 1.2E-22 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 233 3.2E-40 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VV1_1567 9a0eca6efaa4bf73c37f78cacf70f0d4 243 Pfam PF02565 Recombination protein O C terminal 86 228 1.4E-23 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VV1_3022 136ccd05e7ce1d9ab045231242e908e2 211 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 39 211 4.6E-68 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VV1_3022 136ccd05e7ce1d9ab045231242e908e2 211 PIRSF PIRSF015617 16 211 1.1E-65 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VV1_3022 136ccd05e7ce1d9ab045231242e908e2 211 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 15 36 8.4E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VV1_3022 136ccd05e7ce1d9ab045231242e908e2 211 Gene3D G3DSA:3.40.50.300 21 211 1.1E-69 T 14-10-2018 VV1_3022 136ccd05e7ce1d9ab045231242e908e2 211 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 42 211 7.5E-58 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VV1_3022 136ccd05e7ce1d9ab045231242e908e2 211 SUPERFAMILY SSF52540 22 211 7.16E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:1.20.5.510 1 40 1.4E-5 T 14-10-2018 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 7.9E-75 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 Pfam PF00355 Rieske [2Fe-2S] domain 54 174 1.3E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 SUPERFAMILY SSF50022 30 191 1.14E-43 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VV1_0597 d9efd21e1f7348f6ff1f27d707d5993e 196 Gene3D G3DSA:2.102.10.10 43 190 1.9E-47 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VV1_2916 89a104763fec5c31109c20271decb40f 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 2.1E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase VV1_2916 89a104763fec5c31109c20271decb40f 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 7.2E-69 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VV1_2916 89a104763fec5c31109c20271decb40f 204 PIRSF PIRSF000495 4 204 1.2E-64 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VV1_2916 89a104763fec5c31109c20271decb40f 204 Gene3D G3DSA:3.40.50.880 2 204 2.0E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_2916 89a104763fec5c31109c20271decb40f 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.561 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VV1_2916 89a104763fec5c31109c20271decb40f 204 SUPERFAMILY SSF52317 5 203 8.56E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_0634 7614712b0f05f97b11e95656443d53dc 247 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 9 239 1.5E-58 T 14-10-2018 IPR014126 Type-F conjugative transfer system secretin TraK VV2_0634 7614712b0f05f97b11e95656443d53dc 247 Pfam PF06586 TraK protein 10 236 1.6E-37 T 14-10-2018 IPR010563 Pilus assembly TraK VV1_0726 3c299c74ea82d68fe276df747e0ca3d3 302 SUPERFAMILY SSF52402 6 209 2.0E-74 T 14-10-2018 VV1_0726 3c299c74ea82d68fe276df747e0ca3d3 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.0E-163 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VV1_0726 3c299c74ea82d68fe276df747e0ca3d3 302 PIRSF PIRSF002936 1 302 1.2E-156 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VV1_0726 3c299c74ea82d68fe276df747e0ca3d3 302 Gene3D G3DSA:3.40.50.620 7 212 3.5E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0726 3c299c74ea82d68fe276df747e0ca3d3 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.02 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VV1_0726 3c299c74ea82d68fe276df747e0ca3d3 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 8.6E-65 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VV1_0681 af7e49758ade8040dc4fe9fba9e14796 105 Gene3D G3DSA:3.30.750.24 10 102 1.7E-11 T 14-10-2018 IPR036513 STAS domain superfamily VV1_0681 af7e49758ade8040dc4fe9fba9e14796 105 SUPERFAMILY SSF52091 2 96 3.34E-15 T 14-10-2018 IPR036513 STAS domain superfamily VV1_0681 af7e49758ade8040dc4fe9fba9e14796 105 Pfam PF13466 STAS domain 14 92 9.6E-18 T 14-10-2018 IPR002645 STAS domain VV1_0237 f36631a9db11fd1a0cb6ff38708ba463 196 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 21 190 4.1E-30 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VV1_0237 f36631a9db11fd1a0cb6ff38708ba463 196 Hamap MF_00789 UPF0319 protein YccT [yccT]. 2 193 24.315 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VV2_1405 a7c426b19279c29181786b63b94a1217 261 Gene3D G3DSA:3.40.190.10 119 215 3.4E-24 T 14-10-2018 VV2_1405 a7c426b19279c29181786b63b94a1217 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 244 1.5E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_1405 a7c426b19279c29181786b63b94a1217 261 Gene3D G3DSA:3.40.190.10 38 244 3.4E-24 T 14-10-2018 VV2_1405 a7c426b19279c29181786b63b94a1217 261 SMART SM00062 33 250 0.0012 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_1405 a7c426b19279c29181786b63b94a1217 261 SUPERFAMILY SSF53850 34 244 1.09E-30 T 14-10-2018 VV1_0751 795111451cfcfe04bee9730d43c306a4 123 Gene3D G3DSA:2.40.150.20 1 123 1.7E-56 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0751 795111451cfcfe04bee9730d43c306a4 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.6E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV1_0751 795111451cfcfe04bee9730d43c306a4 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0751 795111451cfcfe04bee9730d43c306a4 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.6E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VV1_0751 795111451cfcfe04bee9730d43c306a4 123 SUPERFAMILY SSF50193 2 122 3.66E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0751 795111451cfcfe04bee9730d43c306a4 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.421 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV1_0751 795111451cfcfe04bee9730d43c306a4 123 SMART SM01374 1 123 1.2E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.1E-170 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.709 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 SUPERFAMILY SSF55681 8 293 1.88E-132 T 14-10-2018 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 3.1E-149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 Gene3D G3DSA:3.30.930.10 1 215 4.5E-110 T 14-10-2018 VV1_0989 e54b52217855bf0942705c1e3b3cdebf 305 Gene3D G3DSA:1.20.58.180 216 298 1.6E-34 T 14-10-2018 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 SMART SM00846 127 288 1.8E-52 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 Gene3D G3DSA:3.40.50.720 129 462 1.4E-115 T 14-10-2018 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 1.2E-21 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 SUPERFAMILY SSF51735 128 304 5.22E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 1.2E-113 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.5E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 4.9E-47 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 SUPERFAMILY SSF55347 288 451 9.35E-55 T 14-10-2018 VV2_0764 a0beb2604c41a8f42d2e836d3ccafda6 478 Gene3D G3DSA:3.30.360.10 287 452 1.4E-115 T 14-10-2018 VV1_2602 e64f62b9d06f04a473552020466dd9f0 256 SUPERFAMILY SSF161098 4 254 9.35E-54 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2602 e64f62b9d06f04a473552020466dd9f0 256 Gene3D G3DSA:1.10.3720.10 4 256 1.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2602 e64f62b9d06f04a473552020466dd9f0 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 3.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 7.8E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 7.8E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 7.8E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 SUPERFAMILY SSF55594 4 90 5.36E-26 T 14-10-2018 IPR035895 HPr-like superfamily VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 1.4E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 Gene3D G3DSA:3.30.1340.10 1 85 5.6E-28 T 14-10-2018 IPR035895 HPr-like superfamily VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.6E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like VV1_0697 f1946be24cee3d343e9c37116bc1a2f4 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 SUPERFAMILY SSF52343 256 393 3.01E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 1.4E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 SUPERFAMILY SSF63380 149 254 4.4E-29 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Gene3D G3DSA:1.10.490.10 1 142 1.5E-49 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 4.9E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Gene3D G3DSA:2.40.30.10 149 254 9.9E-34 T 14-10-2018 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 SUPERFAMILY SSF46458 1 142 1.4E-37 T 14-10-2018 IPR009050 Globin-like superfamily VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 57.036 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.2E-10 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 4.2E-11 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Gene3D G3DSA:3.40.50.80 257 394 4.3E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV1_1301 a20c1e5a3c12a37f75a885dedf6f9b1f 394 Pfam PF00042 Globin 8 102 2.4E-14 T 14-10-2018 IPR000971 Globin GO:0020037 VV2_1566 4302c9c7390690738d664c8015b7e1c3 318 Gene3D G3DSA:1.10.8.300 199 315 1.6E-38 T 14-10-2018 VV2_1566 4302c9c7390690738d664c8015b7e1c3 318 Gene3D G3DSA:3.40.50.300 17 183 1.5E-46 T 14-10-2018 VV2_1566 4302c9c7390690738d664c8015b7e1c3 318 PIRSF PIRSF002849 1 318 2.6E-127 T 14-10-2018 VV2_1566 4302c9c7390690738d664c8015b7e1c3 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 2.4E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VV2_1566 4302c9c7390690738d664c8015b7e1c3 318 SUPERFAMILY SSF52540 6 290 6.25E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 Gene3D G3DSA:3.40.50.620 194 514 9.0E-111 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 PIRSF PIRSF001589 362 508 3.7E-27 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 PIRSF PIRSF001589 1 379 1.9E-104 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 SUPERFAMILY SSF52402 209 479 1.39E-73 T 14-10-2018 VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 Gene3D G3DSA:3.60.20.10 2 193 2.5E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.3E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 Pfam PF00733 Asparagine synthase 212 511 5.6E-96 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 SUPERFAMILY SSF56235 1 196 2.06E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_0183 74352ab1174696adf4c609d7fcc72ee9 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 1.7E-115 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.3E-24 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 PIRSF PIRSF019401 1 69 1.3E-18 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 PIRSF PIRSF019401 63 177 9.4E-35 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 3.1E-46 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 41.617 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 SUPERFAMILY SSF47598 1 34 5.78E-14 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 Gene3D G3DSA:1.10.1220.10 1 40 1.6E-24 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 SUPERFAMILY SSF82808 62 176 2.48E-49 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VV1_0170 a02260ed3ecd7986c302934f53fd8119 177 Gene3D G3DSA:1.20.1380.10 62 177 3.2E-47 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VV1_0618 3b6946a15bc374900c92aeadc6c77369 228 Gene3D G3DSA:1.20.58.220 2 227 7.9E-62 T 14-10-2018 IPR038078 PhoU-like domain superfamily VV1_0618 3b6946a15bc374900c92aeadc6c77369 228 SUPERFAMILY SSF109755 34 218 4.01E-15 T 14-10-2018 VV1_0618 3b6946a15bc374900c92aeadc6c77369 228 Pfam PF01865 Protein of unknown function DUF47 9 225 3.6E-66 T 14-10-2018 IPR018445 Putative phosphate transport regulator VV1_0618 3b6946a15bc374900c92aeadc6c77369 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 5 227 2.8E-68 T 14-10-2018 IPR002727 Protein of unknown function DUF47 VV2_1291 ad7b8cf6d8784e1109ffb00cc9dbcc6a 545 SUPERFAMILY SSF53850 26 534 3.26E-116 T 14-10-2018 VV2_1291 ad7b8cf6d8784e1109ffb00cc9dbcc6a 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 447 1.8E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV2_1291 ad7b8cf6d8784e1109ffb00cc9dbcc6a 545 Gene3D G3DSA:3.10.105.10 268 506 8.7E-168 T 14-10-2018 VV2_1291 ad7b8cf6d8784e1109ffb00cc9dbcc6a 545 Gene3D G3DSA:3.90.76.10 60 167 8.7E-168 T 14-10-2018 VV2_1291 ad7b8cf6d8784e1109ffb00cc9dbcc6a 545 PIRSF PIRSF002741 3 525 2.8E-89 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV2_1291 ad7b8cf6d8784e1109ffb00cc9dbcc6a 545 Gene3D G3DSA:3.40.190.10 44 529 8.7E-168 T 14-10-2018 VV2_1291 ad7b8cf6d8784e1109ffb00cc9dbcc6a 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 77 99 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VV1_2749 84de17349027ad287a294b6a49cc3552 434 SUPERFAMILY SSF53850 26 421 3.73E-69 T 14-10-2018 VV1_2749 84de17349027ad287a294b6a49cc3552 434 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VV1_2749 84de17349027ad287a294b6a49cc3552 434 Pfam PF13416 Bacterial extracellular solute-binding protein 45 367 2.3E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV1_2749 84de17349027ad287a294b6a49cc3552 434 Gene3D G3DSA:3.40.190.10 146 419 8.7E-114 T 14-10-2018 VV1_2749 84de17349027ad287a294b6a49cc3552 434 Gene3D G3DSA:3.40.190.10 30 380 8.7E-114 T 14-10-2018 VV1_2271 146e3984a435134e0c28a46cc06f6df1 191 Gene3D G3DSA:3.40.630.30 11 188 3.3E-47 T 14-10-2018 VV1_2271 146e3984a435134e0c28a46cc06f6df1 191 SUPERFAMILY SSF55729 8 183 3.48E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2271 146e3984a435134e0c28a46cc06f6df1 191 Pfam PF13302 Acetyltransferase (GNAT) domain 15 158 3.4E-21 T 14-10-2018 IPR000182 GNAT domain VV1_2260 8a182cf7db45426b400599951f5a8a36 453 Gene3D G3DSA:3.30.1330.90 10 159 1.8E-49 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VV1_2260 8a182cf7db45426b400599951f5a8a36 453 SUPERFAMILY SSF143548 16 157 1.96E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VV1_2260 8a182cf7db45426b400599951f5a8a36 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 5.1E-228 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VV1_2260 8a182cf7db45426b400599951f5a8a36 453 Pfam PF03313 Serine dehydratase alpha chain 183 448 3.1E-98 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VV1_2260 8a182cf7db45426b400599951f5a8a36 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.4E-54 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VV2_0033 e4e7478415aa356afcf2a37c97ac7dd4 343 Gene3D G3DSA:3.30.830.10 177 326 1.4E-5 T 14-10-2018 VV2_1091 61bcbcfd2d652920526930aa790314fa 728 TIGRFAM TIGR02336 TIGR02336: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase 6 727 0.0 T 14-10-2018 IPR012711 Lacto-N-biose phosphorylase/D-galactosyl-beta-1->4-L-rhamnose phosphorylase GO:0004645 VV2_1091 61bcbcfd2d652920526930aa790314fa 728 Gene3D G3DSA:3.20.20.80 9 432 1.4E-180 T 14-10-2018 VV2_1091 61bcbcfd2d652920526930aa790314fa 728 Pfam PF17385 Lacto-N-biose phosphorylase central domain 444 669 1.2E-78 T 14-10-2018 IPR035363 Lacto-N-biose phosphorylase, central domain VV2_1091 61bcbcfd2d652920526930aa790314fa 728 Pfam PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain 9 439 8.9E-181 T 14-10-2018 IPR035080 Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domain VV2_1091 61bcbcfd2d652920526930aa790314fa 728 Gene3D G3DSA:2.60.40.1180 673 728 2.7E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV2_1091 61bcbcfd2d652920526930aa790314fa 728 Gene3D G3DSA:3.40.50.880 441 672 6.0E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_1091 61bcbcfd2d652920526930aa790314fa 728 Pfam PF17386 Lacto-N-biose phosphorylase C-terminal domain 674 726 7.2E-19 T 14-10-2018 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain VV2_1091 61bcbcfd2d652920526930aa790314fa 728 SUPERFAMILY SSF52317 475 665 2.75E-18 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_1091 61bcbcfd2d652920526930aa790314fa 728 Gene3D G3DSA:2.60.40.10 76 180 1.4E-180 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1644 b14b398978f507253e701f01f3937b96 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.9E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_1644 b14b398978f507253e701f01f3937b96 161 SUPERFAMILY SSF55083 1 157 8.24E-55 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_1644 b14b398978f507253e701f01f3937b96 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_1644 b14b398978f507253e701f01f3937b96 161 Gene3D G3DSA:3.30.70.560 1 159 1.5E-59 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_1644 b14b398978f507253e701f01f3937b96 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 6.5E-47 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV2_0932 133eea568be4d027fccbb1e66a2bd3c5 133 Pfam PF00293 NUDIX domain 5 117 1.0E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV2_0932 133eea568be4d027fccbb1e66a2bd3c5 133 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV2_0932 133eea568be4d027fccbb1e66a2bd3c5 133 SUPERFAMILY SSF55811 2 129 2.98E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV2_0932 133eea568be4d027fccbb1e66a2bd3c5 133 Gene3D G3DSA:3.90.79.10 4 130 9.9E-24 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 7.0E-14 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 7.0E-14 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 7.0E-14 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.0E-14 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 7.7E-7 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.7E-7 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 7.7E-7 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 Gene3D G3DSA:3.50.50.100 1 406 2.6E-115 T 14-10-2018 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 5.4E-62 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VV1_2074 9f7f2788833b806763e9eaf7719c7c5a 429 SUPERFAMILY SSF51905 3 347 6.66E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0637 1037b17341aa642cf84861932e34fcc2 360 Gene3D G3DSA:3.40.190.10 154 325 6.7E-118 T 14-10-2018 VV1_0637 1037b17341aa642cf84861932e34fcc2 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 325 2.0E-74 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VV1_0637 1037b17341aa642cf84861932e34fcc2 360 PIRSF PIRSF039026 5 360 2.6E-133 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VV1_0637 1037b17341aa642cf84861932e34fcc2 360 Gene3D G3DSA:3.40.190.170 36 346 6.7E-118 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VV2_0810 fabaaf41b66d5559019f3b97201be198 960 SUPERFAMILY SSF53649 379 654 1.99E-11 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_0810 fabaaf41b66d5559019f3b97201be198 960 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 381 647 2.2E-13 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VV2_1392 72bf6066521aac8878a56c9a72d18cad 281 SUPERFAMILY SSF56281 22 236 5.51E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1392 72bf6066521aac8878a56c9a72d18cad 281 Pfam PF00753 Metallo-beta-lactamase superfamily 34 216 2.2E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_1392 72bf6066521aac8878a56c9a72d18cad 281 Gene3D G3DSA:3.60.15.10 20 251 4.4E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_1392 72bf6066521aac8878a56c9a72d18cad 281 SMART SM00849 35 216 1.4E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.4E-74 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 15.886 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.3E-66 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV1_0904 d57bda5eacdee73a0d468b94d48edfad 249 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.2E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VV1_1861 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 PIRSF PIRSF005650 4 241 1.4E-88 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VV1_1861 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.126 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VV1_1861 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 SUPERFAMILY SSF53633 7 240 1.31E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1861 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Gene3D G3DSA:3.40.1160.10 3 241 1.6E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_1861 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 4.6E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VV1_1861 b8bf7f841ce7b7360b2f82a9f4ce2ea1 241 Pfam PF00696 Amino acid kinase family 11 219 6.7E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV2_1592 b88db478d638ec84a1309db82cb4a6d3 240 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 205 220 5.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1592 b88db478d638ec84a1309db82cb4a6d3 240 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 236 5.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1592 b88db478d638ec84a1309db82cb4a6d3 240 SUPERFAMILY SSF51182 4 163 1.3E-9 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_1592 b88db478d638ec84a1309db82cb4a6d3 240 SMART SM00342 154 236 3.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1592 b88db478d638ec84a1309db82cb4a6d3 240 Gene3D G3DSA:1.10.10.60 134 239 6.4E-23 T 14-10-2018 VV2_1592 b88db478d638ec84a1309db82cb4a6d3 240 Pfam PF12833 Helix-turn-helix domain 160 238 2.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1592 b88db478d638ec84a1309db82cb4a6d3 240 SUPERFAMILY SSF46689 191 238 2.97E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 Gene3D G3DSA:3.20.20.450 139 383 1.6E-75 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 Gene3D G3DSA:3.40.50.2300 1 138 1.9E-20 T 14-10-2018 VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 Pfam PF00072 Response regulator receiver domain 7 122 5.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 Pfam PF00563 EAL domain 149 375 1.9E-65 T 14-10-2018 IPR001633 EAL domain VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 SUPERFAMILY SSF52172 3 141 5.69E-19 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 SMART SM00052 138 380 9.2E-72 T 14-10-2018 IPR001633 EAL domain VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 SMART SM00448 5 122 9.4E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1511 dd1cb350b1d4ada9ea545628fceccf0b 386 SUPERFAMILY SSF141868 148 381 4.32E-74 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1311 7b13076856795c4ef917cabdd5b053db 182 SUPERFAMILY SSF55729 31 161 4.95E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_1311 7b13076856795c4ef917cabdd5b053db 182 Pfam PF13673 Acetyltransferase (GNAT) domain 98 157 1.3E-5 T 14-10-2018 IPR000182 GNAT domain VV2_1311 7b13076856795c4ef917cabdd5b053db 182 Gene3D G3DSA:3.40.630.30 4 168 3.3E-33 T 14-10-2018 VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 SUPERFAMILY SSF47807 164 254 5.23E-17 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 SMART SM00475 3 254 2.6E-64 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 Gene3D G3DSA:1.10.150.20 167 255 1.7E-17 T 14-10-2018 VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 46.247 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 Gene3D G3DSA:3.40.50.1010 1 166 9.0E-52 T 14-10-2018 VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 SMART SM00279 167 202 5.6E-8 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 SUPERFAMILY SSF88723 4 164 1.52E-38 T 14-10-2018 IPR029060 PIN-like domain superfamily VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 255 1.3E-18 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VV1_0301 3bf92dba2edcbf6e38e2a44d9dff9d5e 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 159 3.2E-31 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VV1_2059 d9439d75cdaa91b5c6762188ea80db57 445 Gene3D G3DSA:1.20.1740.10 1 438 8.7E-60 T 14-10-2018 VV1_2059 d9439d75cdaa91b5c6762188ea80db57 445 PIRSF PIRSF006060 1 433 2.4E-49 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV1_2059 d9439d75cdaa91b5c6762188ea80db57 445 Pfam PF13520 Amino acid permease 8 421 1.5E-36 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV1_0840 43a7f7fdf251bad10bb14a0946a13edf 347 SUPERFAMILY SSF161098 139 325 1.44E-18 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0840 43a7f7fdf251bad10bb14a0946a13edf 347 Gene3D G3DSA:1.10.3720.10 133 338 2.5E-17 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0840 43a7f7fdf251bad10bb14a0946a13edf 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 5.7E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1428 6af10a2208745a4c430ca1b55a9ca498 179 Gene3D G3DSA:3.40.50.850 1 179 2.2E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VV2_1428 6af10a2208745a4c430ca1b55a9ca498 179 SUPERFAMILY SSF52499 1 179 1.19E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VV2_1428 6af10a2208745a4c430ca1b55a9ca498 179 Pfam PF00857 Isochorismatase family 7 149 1.2E-29 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VV1_1716 4d8da69b9e26578aee913c4783336fee 167 Pfam PF13527 Acetyltransferase (GNAT) domain 4 123 3.7E-10 T 14-10-2018 VV1_1716 4d8da69b9e26578aee913c4783336fee 167 SUPERFAMILY SSF55729 1 130 3.72E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1716 4d8da69b9e26578aee913c4783336fee 167 Gene3D G3DSA:3.40.630.30 1 167 3.4E-46 T 14-10-2018 VV1_0506 a0f4f4739838abe54e2cdcc5314c9e99 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 5.8E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VV1_0506 a0f4f4739838abe54e2cdcc5314c9e99 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VV1_0506 a0f4f4739838abe54e2cdcc5314c9e99 168 TIGRFAM TIGR00077 lspA: signal peptidase II 6 167 4.1E-49 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VV1_0506 a0f4f4739838abe54e2cdcc5314c9e99 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VV1_0506 a0f4f4739838abe54e2cdcc5314c9e99 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VV1_0506 a0f4f4739838abe54e2cdcc5314c9e99 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.0E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VV1_0506 a0f4f4739838abe54e2cdcc5314c9e99 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.854 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VV2_0361 ad171ccc7eece34103a0b6a3f757cb3c 134 Gene3D G3DSA:3.30.420.270 60 129 2.1E-10 T 14-10-2018 VV2_0361 ad171ccc7eece34103a0b6a3f757cb3c 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 1.5E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VV1_1619 bdd5b67dc1bb817ccaa36e51339d9787 64 SUPERFAMILY SSF57716 2 62 3.78E-22 T 14-10-2018 VV1_1619 bdd5b67dc1bb817ccaa36e51339d9787 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.705 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VV1_1619 bdd5b67dc1bb817ccaa36e51339d9787 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 6.0E-25 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VV1_1619 bdd5b67dc1bb817ccaa36e51339d9787 64 Gene3D G3DSA:3.30.50.10 1 64 4.6E-25 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 SUPERFAMILY SSF51445 20 373 3.19E-60 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 SUPERFAMILY SSF51011 395 457 1.01E-7 T 14-10-2018 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 Gene3D G3DSA:3.20.20.80 18 388 1.5E-79 T 14-10-2018 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 SMART SM00642 22 383 7.5E-28 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 PRINTS PR00110 Alpha-amylase signature 97 108 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 PRINTS PR00110 Alpha-amylase signature 305 317 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 PRINTS PR00110 Alpha-amylase signature 210 221 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 PRINTS PR00110 Alpha-amylase signature 239 257 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 PRINTS PR00110 Alpha-amylase signature 64 81 1.3E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VV2_1622 c546edf4ae22d369af6820cbcca86aff 459 Pfam PF00128 Alpha amylase, catalytic domain 40 247 3.4E-17 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 SUPERFAMILY SSF50249 9 69 7.42E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 SUPERFAMILY SSF53335 76 438 1.32E-85 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 437 8.3E-33 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 Gene3D G3DSA:3.40.1350.30 135 271 9.2E-118 T 14-10-2018 VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 6.0E-131 T 14-10-2018 VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 Gene3D G3DSA:2.40.50.140 1 88 9.2E-28 T 14-10-2018 VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 438 63.939 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 Pfam PF01938 TRAM domain 17 68 3.4E-12 T 14-10-2018 IPR002792 TRAM domain VV1_1574 4fafef09d17e919d185c51ab72bf9ae6 438 Gene3D G3DSA:3.40.50.150 89 433 9.2E-118 T 14-10-2018 VV1_1286 771dec9fe66b4c173142c02baa77aa0d 181 Pfam PF00929 Exonuclease 9 170 5.0E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_1286 771dec9fe66b4c173142c02baa77aa0d 181 SUPERFAMILY SSF53098 1 180 6.96E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_1286 771dec9fe66b4c173142c02baa77aa0d 181 Gene3D G3DSA:3.30.420.10 1 181 1.7E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_1286 771dec9fe66b4c173142c02baa77aa0d 181 SMART SM00479 7 180 3.8E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_1286 771dec9fe66b4c173142c02baa77aa0d 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.372 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 VV2_1034 17cfe76ae226fcc759bfd60c7475d779 177 Pfam PF01872 RibD C-terminal domain 4 169 5.6E-20 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VV2_1034 17cfe76ae226fcc759bfd60c7475d779 177 SUPERFAMILY SSF53597 4 175 2.49E-36 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VV2_1034 17cfe76ae226fcc759bfd60c7475d779 177 Gene3D G3DSA:3.40.430.10 2 175 3.2E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VV1_1660 3a6e422dcb307c2331e233b486b80d28 337 Gene3D G3DSA:3.40.190.10 25 297 1.0E-126 T 14-10-2018 VV1_1660 3a6e422dcb307c2331e233b486b80d28 337 Gene3D G3DSA:3.40.190.10 120 328 1.0E-126 T 14-10-2018 VV1_1660 3a6e422dcb307c2331e233b486b80d28 337 SUPERFAMILY SSF53850 24 332 1.63E-77 T 14-10-2018 VV1_1660 3a6e422dcb307c2331e233b486b80d28 337 PIRSF PIRSF002825 1 337 1.1E-108 T 14-10-2018 IPR026045 Ferric binding protein VV1_1660 3a6e422dcb307c2331e233b486b80d28 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 295 4.1E-21 T 14-10-2018 VV1_0703 dc3c4fb399ad7f0d2494f750716603d4 342 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 26 341 4.6E-148 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 VV1_0703 dc3c4fb399ad7f0d2494f750716603d4 342 Gene3D G3DSA:3.40.190.10 138 337 2.2E-119 T 14-10-2018 VV1_0703 dc3c4fb399ad7f0d2494f750716603d4 342 Pfam PF13343 Bacterial extracellular solute-binding protein 88 304 3.4E-20 T 14-10-2018 VV1_0703 dc3c4fb399ad7f0d2494f750716603d4 342 SUPERFAMILY SSF53850 36 337 1.09E-65 T 14-10-2018 VV1_0703 dc3c4fb399ad7f0d2494f750716603d4 342 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 33 336 1.4E-142 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 VV1_0703 dc3c4fb399ad7f0d2494f750716603d4 342 Gene3D G3DSA:3.40.190.10 38 312 2.2E-119 T 14-10-2018 VV1_2091 2556081f9861aef7419b2bf59a6c0812 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.196 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 VV1_2091 2556081f9861aef7419b2bf59a6c0812 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 1.0E-187 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 Pfam PF01171 PP-loop family 22 199 5.6E-59 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 Pfam PF09179 TilS substrate binding domain 248 315 9.7E-15 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 5.6E-55 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 23.045 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 SUPERFAMILY SSF52402 15 233 5.19E-62 T 14-10-2018 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 SMART SM00977 365 434 8.4E-23 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 Gene3D G3DSA:3.40.50.620 12 233 7.8E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 Pfam PF11734 TilS substrate C-terminal domain 367 432 9.7E-23 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 SUPERFAMILY SSF82829 238 319 1.28E-22 T 14-10-2018 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 Gene3D G3DSA:1.20.59.20 236 318 1.0E-25 T 14-10-2018 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 7.4E-18 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VV1_1877 b5733b5ad868ff1d1bb67a492e1f7048 436 SUPERFAMILY SSF56037 323 435 6.8E-29 T 14-10-2018 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 9.8E-56 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 9.8E-56 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 9.8E-56 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 9.8E-56 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 9.8E-56 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 Gene3D G3DSA:3.40.1160.10 6 274 4.7E-89 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 SUPERFAMILY SSF53633 14 265 2.62E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 PIRSF PIRSF000729 9 309 3.9E-112 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 36.186 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 Pfam PF00696 Amino acid kinase family 14 243 4.0E-45 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VV1_0326 c6d8bd437c20a418413981d46aa32dae 309 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 302 1.4E-121 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VV1_3209 db5e32c1242e9b50237686f4459bc3fc 507 SUPERFAMILY SSF52540 300 496 1.22E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3209 db5e32c1242e9b50237686f4459bc3fc 507 SUPERFAMILY SSF53474 13 255 5.65E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_3209 db5e32c1242e9b50237686f4459bc3fc 507 Gene3D G3DSA:3.40.50.300 292 437 9.5E-8 T 14-10-2018 VV1_3209 db5e32c1242e9b50237686f4459bc3fc 507 Pfam PF05057 Putative serine esterase (DUF676) 15 157 1.7E-5 T 14-10-2018 IPR007751 Domain of unknown function DUF676, lipase-like VV1_3209 db5e32c1242e9b50237686f4459bc3fc 507 Gene3D G3DSA:3.40.50.1820 10 224 6.2E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 Gene3D G3DSA:3.40.50.1100 20 322 4.2E-135 T 14-10-2018 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 SUPERFAMILY SSF55021 332 418 5.8E-27 T 14-10-2018 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 6.0E-251 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 6.7E-84 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 SUPERFAMILY SSF53686 10 360 3.8E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 Gene3D G3DSA:3.40.50.1100 56 152 4.2E-135 T 14-10-2018 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 508 1.8E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 5.5E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 SUPERFAMILY SSF55021 415 508 2.13E-26 T 14-10-2018 VV1_1028 5ce6b3ce2e8772c82dbed2be8988be9a 509 Gene3D G3DSA:3.40.1020.10 333 509 4.1E-71 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VV2_0396 e3b1f236fa45ed7a42d6110bd72adfa3 321 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 67 8.5E-13 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV2_0396 e3b1f236fa45ed7a42d6110bd72adfa3 321 Gene3D G3DSA:3.40.1030.10 72 314 2.6E-39 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV2_0396 e3b1f236fa45ed7a42d6110bd72adfa3 321 Gene3D G3DSA:1.20.970.10 3 71 4.2E-17 T 14-10-2018 VV2_0396 e3b1f236fa45ed7a42d6110bd72adfa3 321 SUPERFAMILY SSF47648 8 71 2.09E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV2_0396 e3b1f236fa45ed7a42d6110bd72adfa3 321 SUPERFAMILY SSF52418 75 315 6.28E-42 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VV2_1464 778bb78c6ae73d5430e07a5e05b5ae6c 106 SUPERFAMILY SSF117782 1 106 3.4E-39 T 14-10-2018 IPR035439 UPF0145 domain superfamily VV2_1464 778bb78c6ae73d5430e07a5e05b5ae6c 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 25.373 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 VV2_1464 778bb78c6ae73d5430e07a5e05b5ae6c 106 Gene3D G3DSA:3.30.110.70 2 106 5.0E-43 T 14-10-2018 VV2_1464 778bb78c6ae73d5430e07a5e05b5ae6c 106 Pfam PF01906 Putative heavy-metal-binding 1 105 8.5E-41 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:1.10.10.10 14 104 2.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 Pfam PF03466 LysR substrate binding domain 121 308 6.5E-20 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 SUPERFAMILY SSF53850 106 309 6.52E-38 T 14-10-2018 VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 SUPERFAMILY SSF46785 22 99 2.72E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:3.40.190.10 108 307 1.3E-39 T 14-10-2018 VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 Gene3D G3DSA:3.40.190.10 187 283 1.3E-39 T 14-10-2018 VV1_0650 c7a44bc0c717284059722af49c81cbf3 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1540 efe7f975f530cf9970c974663d1ca8ab 236 Gene3D G3DSA:3.40.50.1580 1 236 5.3E-76 T 14-10-2018 VV2_1540 efe7f975f530cf9970c974663d1ca8ab 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.6E-111 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV2_1540 efe7f975f530cf9970c974663d1ca8ab 236 SUPERFAMILY SSF53167 3 234 2.88E-91 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VV2_1540 efe7f975f530cf9970c974663d1ca8ab 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.441 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VV2_1540 efe7f975f530cf9970c974663d1ca8ab 236 Pfam PF01048 Phosphorylase superfamily 17 217 1.5E-34 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 Gene3D G3DSA:1.20.1740.10 1 404 1.2E-5 T 14-10-2018 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 84 104 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 144 164 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 281 300 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 336 355 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 220 239 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 315 333 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 39 58 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 PRINTS PR00166 Aromatic amino acid permease signature 12 35 6.2E-81 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 Pfam PF03222 Tryptophan/tyrosine permease family 3 391 1.0E-128 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VV2_0855 a92fb56e9477ab7c268caa6d45dd8e2e 404 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 9 384 1.8E-131 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VV1_0959 450c1ff03b33440b7aad0ebecb099f60 374 SUPERFAMILY SSF102114 34 362 1.96E-54 T 14-10-2018 VV1_0959 450c1ff03b33440b7aad0ebecb099f60 374 Pfam PF04055 Radical SAM superfamily 81 222 5.3E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_0959 450c1ff03b33440b7aad0ebecb099f60 374 Gene3D G3DSA:3.20.20.70 14 364 2.5E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0959 450c1ff03b33440b7aad0ebecb099f60 374 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 8.5E-176 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 VV1_0959 450c1ff03b33440b7aad0ebecb099f60 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 1.9E-27 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VV1_0959 450c1ff03b33440b7aad0ebecb099f60 374 SMART SM00876 256 359 4.0E-38 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VV2_0258 34ebc4c7e9f6caef354f1024c5bb04f7 113 Gene3D G3DSA:3.30.70.120 1 109 2.7E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VV2_0258 34ebc4c7e9f6caef354f1024c5bb04f7 113 Pfam PF03091 CutA1 divalent ion tolerance protein 9 105 1.6E-31 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 VV2_0258 34ebc4c7e9f6caef354f1024c5bb04f7 113 SUPERFAMILY SSF54913 5 107 2.48E-33 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VV1_3155 dc942809e7cc3e4e83c740a6b78913ab 193 Pfam PF13505 Outer membrane protein beta-barrel domain 7 193 8.0E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV1_3155 dc942809e7cc3e4e83c740a6b78913ab 193 SUPERFAMILY SSF56925 29 191 2.51E-11 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV1_3155 dc942809e7cc3e4e83c740a6b78913ab 193 Gene3D G3DSA:2.40.160.20 26 193 1.4E-6 T 14-10-2018 VV1_0233 de69bb3e83ffbe228f1e3a3338fd66ad 211 PIRSF PIRSF028688 1 211 2.5E-124 T 14-10-2018 IPR014549 Flagellar protein FlgO VV2_0920 006e02680af6c70cba6db8f51f16429c 510 Gene3D G3DSA:3.60.110.10 222 508 6.1E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV2_0920 006e02680af6c70cba6db8f51f16429c 510 Gene3D G3DSA:3.40.630.30 4 219 9.2E-47 T 14-10-2018 VV2_0920 006e02680af6c70cba6db8f51f16429c 510 SUPERFAMILY SSF56317 221 491 3.01E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV2_0920 006e02680af6c70cba6db8f51f16429c 510 SUPERFAMILY SSF55729 5 139 4.71E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0920 006e02680af6c70cba6db8f51f16429c 510 Pfam PF00795 Carbon-nitrogen hydrolase 226 485 5.3E-34 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VV2_0920 006e02680af6c70cba6db8f51f16429c 510 Pfam PF00583 Acetyltransferase (GNAT) family 48 136 3.0E-6 T 14-10-2018 IPR000182 GNAT domain VV1_1014 82636c9acfa5c2e5b919495d392ebd99 129 Pfam PF03899 ATP synthase I chain 16 111 5.9E-16 T 14-10-2018 IPR005598 ATP synthase protein I VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 Gene3D G3DSA:3.90.70.10 6 127 6.5E-16 T 14-10-2018 VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 ProSitePatterns PS00211 ABC transporters family signature. 609 623 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 SMART SM00382 497 682 2.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 Pfam PF00005 ABC transporter 488 637 3.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 Gene3D G3DSA:3.40.50.300 457 705 7.3E-73 T 14-10-2018 VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 SUPERFAMILY SSF90123 142 455 1.96E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 Pfam PF00664 ABC transporter transmembrane region 161 419 2.6E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 Gene3D G3DSA:1.20.1560.10 144 456 6.9E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 10 698 9.8E-262 T 14-10-2018 IPR017750 ATPase, type I secretion system VV2_1515 0f6eee0b41b4d14d50973e79a5c59272 717 SUPERFAMILY SSF52540 464 698 1.1E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 Gene3D G3DSA:3.40.50.720 29 121 8.3E-36 T 14-10-2018 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 Gene3D G3DSA:3.40.1190.10 122 344 6.2E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 SUPERFAMILY SSF53244 343 479 4.84E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 SUPERFAMILY SSF51984 32 120 2.22E-23 T 14-10-2018 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 Gene3D G3DSA:3.90.190.20 345 481 3.4E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 SUPERFAMILY SSF53623 128 339 2.09E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 Pfam PF08245 Mur ligase middle domain 139 322 2.7E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 Pfam PF01225 Mur ligase family, catalytic domain 33 132 1.4E-19 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 33 479 8.0E-260 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 343 419 1.0E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VV1_0706 4fc47d0a5876edfb0cab6860a683723a 484 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 32 480 58.995 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VV2_1607 ff127cc68a2e45534f5bceebb60fcd03 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1607 ff127cc68a2e45534f5bceebb60fcd03 153 SUPERFAMILY SSF46689 1 74 1.23E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1607 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.20.5.830 111 153 2.3E-23 T 14-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily VV2_1607 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 14-10-2018 VV2_1607 ff127cc68a2e45534f5bceebb60fcd03 153 Gene3D G3DSA:1.10.287.790 61 110 5.2E-28 T 14-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily VV2_1264 3fffbd3eddd1750d90e8b1883e03c720 259 Gene3D G3DSA:3.20.20.450 5 254 5.0E-65 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1264 3fffbd3eddd1750d90e8b1883e03c720 259 SMART SM00052 7 247 1.7E-18 T 14-10-2018 IPR001633 EAL domain VV2_1264 3fffbd3eddd1750d90e8b1883e03c720 259 SUPERFAMILY SSF141868 25 242 9.68E-59 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1264 3fffbd3eddd1750d90e8b1883e03c720 259 Pfam PF00563 EAL domain 24 242 3.7E-48 T 14-10-2018 IPR001633 EAL domain VV2_1509 a41b0a87fb7b6b196d93457247b77aa9 451 SMART SM00267 292 450 4.3E-40 T 14-10-2018 IPR000160 GGDEF domain VV2_1509 a41b0a87fb7b6b196d93457247b77aa9 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 451 1.5E-37 T 14-10-2018 IPR000160 GGDEF domain VV2_1509 a41b0a87fb7b6b196d93457247b77aa9 451 Gene3D G3DSA:3.30.70.270 289 451 2.5E-42 T 14-10-2018 VV2_1509 a41b0a87fb7b6b196d93457247b77aa9 451 SUPERFAMILY SSF55073 308 451 1.1E-35 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1509 a41b0a87fb7b6b196d93457247b77aa9 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 305 451 1.5E-37 T 14-10-2018 IPR000160 GGDEF domain VV2_0735 2ba7c57eadb91ad2e6c1722d7749fc89 293 Pfam PF00480 ROK family 4 285 1.1E-57 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV2_0735 2ba7c57eadb91ad2e6c1722d7749fc89 293 Gene3D G3DSA:3.30.420.40 119 271 6.1E-73 T 14-10-2018 VV2_0735 2ba7c57eadb91ad2e6c1722d7749fc89 293 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV2_0735 2ba7c57eadb91ad2e6c1722d7749fc89 293 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 291 48.857 T 14-10-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 VV2_0735 2ba7c57eadb91ad2e6c1722d7749fc89 293 SUPERFAMILY SSF53067 1 287 5.02E-47 T 14-10-2018 VV2_0735 2ba7c57eadb91ad2e6c1722d7749fc89 293 Gene3D G3DSA:3.30.420.40 5 284 6.1E-73 T 14-10-2018 VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 SMART SM00862 147 218 1.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 Gene3D G3DSA:3.40.50.2300 1 120 4.1E-29 T 14-10-2018 VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 Pfam PF00072 Response regulator receiver domain 6 112 1.5E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 SUPERFAMILY SSF52172 4 116 1.42E-27 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 SMART SM00448 3 111 9.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 Gene3D G3DSA:1.10.10.10 126 220 1.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 2.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV2_0313 79a2c2f71121f1899d02e02e6ecb7db1 220 SUPERFAMILY SSF46894 124 218 2.64E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1044 80e3f56f958b4677615a903421d2a0af 161 Pfam PF04224 Protein of unknown function, DUF417 17 156 1.9E-26 T 14-10-2018 IPR007339 Inner membrane protein RclC-like VV2_1044 80e3f56f958b4677615a903421d2a0af 161 PIRSF PIRSF028065 2 161 4.6E-70 T 14-10-2018 IPR016865 Inner membrane protein RclC VV2_0658 821be49217bb7cb525a613fd23ff7d33 1270 Pfam PF13289 SIR2-like domain 134 271 1.0E-11 T 14-10-2018 IPR039444 SIR2-like domain VV2_0658 821be49217bb7cb525a613fd23ff7d33 1270 SUPERFAMILY SSF52467 19 240 4.09E-6 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV2_0545 fff6bdd1bbd0a1391454b368d88bf223 258 SUPERFAMILY SSF69572 4 249 1.96E-85 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VV2_0545 fff6bdd1bbd0a1391454b368d88bf223 258 Gene3D G3DSA:3.40.50.720 4 255 2.1E-88 T 14-10-2018 VV2_0545 fff6bdd1bbd0a1391454b368d88bf223 258 Pfam PF00899 ThiF family 12 245 1.0E-63 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VV2_0545 fff6bdd1bbd0a1391454b368d88bf223 258 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 7.9E-132 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 VV1_2704 bf9c63607075844ef5ae02bfd1a34597 401 SUPERFAMILY SSF161098 194 382 3.01E-23 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2704 bf9c63607075844ef5ae02bfd1a34597 401 SUPERFAMILY SSF161098 92 160 6.54E-12 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2704 bf9c63607075844ef5ae02bfd1a34597 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 1.2E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV1_2704 bf9c63607075844ef5ae02bfd1a34597 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 1.5E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2704 bf9c63607075844ef5ae02bfd1a34597 401 Gene3D G3DSA:1.10.3720.10 190 397 2.3E-31 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2704 bf9c63607075844ef5ae02bfd1a34597 401 Gene3D G3DSA:1.10.3720.10 79 182 1.2E-14 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0594 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF47616 82 208 2.42E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV1_0594 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 8.9E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV1_0594 3752a24761f0f02e50a3d90906e7b6a8 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.8E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal VV1_0594 3752a24761f0f02e50a3d90906e7b6a8 211 SUPERFAMILY SSF52833 11 110 8.42E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_0594 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:1.20.1050.10 89 193 5.7E-78 T 14-10-2018 VV1_0594 3752a24761f0f02e50a3d90906e7b6a8 211 Gene3D G3DSA:3.40.30.10 11 202 5.7E-78 T 14-10-2018 VV2_1017 5731f1aec195a297d2c5adcc4414744f 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 2.9E-99 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV2_1017 5731f1aec195a297d2c5adcc4414744f 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV2_1017 5731f1aec195a297d2c5adcc4414744f 284 PIRSF PIRSF001359 1 284 3.7E-110 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV2_1017 5731f1aec195a297d2c5adcc4414744f 284 Gene3D G3DSA:3.20.20.70 1 284 4.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1017 5731f1aec195a297d2c5adcc4414744f 284 SUPERFAMILY SSF51569 3 283 5.86E-101 T 14-10-2018 VV2_1017 5731f1aec195a297d2c5adcc4414744f 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 2.4E-149 T 14-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VV2_1017 5731f1aec195a297d2c5adcc4414744f 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 1.5E-101 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VV1_0245 b8862fc2bc7da9256c9588bba408950b 193 Pfam PF01713 Smr domain 95 174 4.9E-18 T 14-10-2018 IPR002625 Smr domain VV1_0245 b8862fc2bc7da9256c9588bba408950b 193 SMART SM00463 92 175 1.5E-11 T 14-10-2018 IPR002625 Smr domain VV1_0245 b8862fc2bc7da9256c9588bba408950b 193 SUPERFAMILY SSF160443 93 174 5.23E-13 T 14-10-2018 IPR036063 Smr domain superfamily VV1_0245 b8862fc2bc7da9256c9588bba408950b 193 Gene3D G3DSA:3.30.1370.110 48 181 1.1E-40 T 14-10-2018 VV2_1051 630b86baef917a134cf6bb6db828243a 199 Pfam PF01810 LysE type translocator 14 195 2.8E-18 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_0579 bf52e0ff05db452583b0df4e9d474a48 399 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 25 381 4.3E-129 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0579 bf52e0ff05db452583b0df4e9d474a48 399 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 23 392 41.606 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0579 bf52e0ff05db452583b0df4e9d474a48 399 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 340 364 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0579 bf52e0ff05db452583b0df4e9d474a48 399 Pfam PF01098 Cell cycle protein 28 382 5.4E-114 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 SMART SM01185 69 123 3.5E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50104 2 64 3.51E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VV1_1264 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.30.30.30 1 64 3.7E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.4E-23 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like VV1_1264 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.40.50.140 66 129 2.0E-28 T 14-10-2018 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50249 130 187 4.45E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1264 0f651e82fdceb4457c02a0594962846f 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.2E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 PIRSF PIRSF005901 2 188 7.9E-63 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP VV1_1264 0f651e82fdceb4457c02a0594962846f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.9E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.8E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 Gene3D G3DSA:2.40.50.140 130 188 3.4E-27 T 14-10-2018 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.852 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 SMART SM00841 131 186 2.2E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VV1_1264 0f651e82fdceb4457c02a0594962846f 188 SUPERFAMILY SSF50249 70 128 4.71E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1264 0f651e82fdceb4457c02a0594962846f 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VV2_0905 76979ad0fb5bb0c1087804bf7fbcbb4b 309 SUPERFAMILY SSF53613 6 301 7.33E-72 T 14-10-2018 IPR029056 Ribokinase-like VV2_0905 76979ad0fb5bb0c1087804bf7fbcbb4b 309 Gene3D G3DSA:3.40.1190.20 3 308 3.8E-78 T 14-10-2018 IPR029056 Ribokinase-like VV2_0905 76979ad0fb5bb0c1087804bf7fbcbb4b 309 Pfam PF00294 pfkB family carbohydrate kinase 6 304 6.8E-58 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VV2_0905 76979ad0fb5bb0c1087804bf7fbcbb4b 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VV1_1108 4b0d2dcf1799633c64275f5e42c2aa56 680 Gene3D G3DSA:1.10.1370.40 13 675 3.9E-267 T 14-10-2018 VV1_1108 4b0d2dcf1799633c64275f5e42c2aa56 680 Gene3D G3DSA:1.10.1370.10 140 610 3.9E-267 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VV1_1108 4b0d2dcf1799633c64275f5e42c2aa56 680 Pfam PF01432 Peptidase family M3 222 677 9.9E-163 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VV1_1108 4b0d2dcf1799633c64275f5e42c2aa56 680 SUPERFAMILY SSF55486 1 677 2.08E-212 T 14-10-2018 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 Gene3D G3DSA:3.30.70.580 70 228 9.9E-49 T 14-10-2018 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 Gene3D G3DSA:3.10.290.10 1 60 1.1E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 Gene3D G3DSA:3.30.70.1560 130 220 9.9E-49 T 14-10-2018 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 SUPERFAMILY SSF55120 68 235 2.26E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 Pfam PF00849 RNA pseudouridylate synthase 68 200 4.1E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 2.7E-54 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 SMART SM00363 3 73 5.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 SUPERFAMILY SSF55174 4 96 8.92E-12 T 14-10-2018 VV1_3060 67c4b37fe7c28d68bc66405d103abaff 320 Pfam PF01479 S4 domain 4 44 1.7E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0094 dcbd104a7b35f6c946080b1998cbc52c 216 Pfam PF09684 Phage tail protein (Tail_P2_I) 10 150 1.6E-33 T 14-10-2018 IPR006521 Tail protein I VV1_0094 dcbd104a7b35f6c946080b1998cbc52c 216 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 10 149 6.2E-26 T 14-10-2018 IPR006521 Tail protein I VV1_0805 5c92270077c8ce1ee90db495ebe41259 163 SUPERFAMILY SSF55729 6 144 2.38E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_0805 5c92270077c8ce1ee90db495ebe41259 163 Pfam PF13302 Acetyltransferase (GNAT) domain 8 139 4.3E-7 T 14-10-2018 IPR000182 GNAT domain VV1_0805 5c92270077c8ce1ee90db495ebe41259 163 Gene3D G3DSA:3.40.630.30 3 150 2.7E-15 T 14-10-2018 VV1_1050 7ba20b22f09bf17767f8ff60638b90a9 367 Pfam PF02481 DNA recombination-mediator protein A 76 278 4.6E-75 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VV1_1050 7ba20b22f09bf17767f8ff60638b90a9 367 Gene3D G3DSA:3.40.50.450 1 291 2.9E-94 T 14-10-2018 VV1_1050 7ba20b22f09bf17767f8ff60638b90a9 367 Gene3D G3DSA:1.10.10.10 295 362 5.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1050 7ba20b22f09bf17767f8ff60638b90a9 367 SUPERFAMILY SSF102405 81 286 2.9E-40 T 14-10-2018 VV1_1050 7ba20b22f09bf17767f8ff60638b90a9 367 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 286 1.8E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VV1_1356 109ce4062f8eb734655306f33f3cbb9f 184 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.8E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VV1_1356 109ce4062f8eb734655306f33f3cbb9f 184 SUPERFAMILY SSF56235 2 172 4.27E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_1356 109ce4062f8eb734655306f33f3cbb9f 184 PIRSF PIRSF039093 1 175 6.9E-88 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VV1_1356 109ce4062f8eb734655306f33f3cbb9f 184 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.238 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VV1_1356 109ce4062f8eb734655306f33f3cbb9f 184 Pfam PF00227 Proteasome subunit 2 170 1.5E-24 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VV1_1356 109ce4062f8eb734655306f33f3cbb9f 184 Gene3D G3DSA:3.60.20.10 1 173 4.3E-68 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 Gene3D G3DSA:1.20.1480.50 562 651 2.2E-7 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 SUPERFAMILY SSF109604 899 995 1.98E-7 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 296 506 1.4E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 SMART SM00062 293 503 0.006 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 Gene3D G3DSA:3.40.190.10 288 504 1.0E-26 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 Pfam PF13487 HD domain 897 962 5.1E-19 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 SMART SM00304 596 649 0.0054 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 Gene3D G3DSA:3.40.190.10 376 467 1.0E-26 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 SUPERFAMILY SSF109604 665 751 1.6E-7 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 SUPERFAMILY SSF53850 291 505 5.76E-21 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 SMART SM00471 669 980 0.0018 T 14-10-2018 IPR003607 HD/PDEase domain VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 Gene3D G3DSA:1.10.3210.10 880 1018 7.6E-23 T 14-10-2018 VV1_2734 668f04487c8c6a4079e93bcadfd02a80 1042 Gene3D G3DSA:1.10.3210.10 652 755 2.6E-17 T 14-10-2018 VV1_0749 69f2e278c1a446ed028377629479460a 179 SUPERFAMILY SSF55282 4 179 1.2E-77 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0749 69f2e278c1a446ed028377629479460a 179 Gene3D G3DSA:3.30.1440.10 1 179 5.4E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0749 69f2e278c1a446ed028377629479460a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.728 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0749 69f2e278c1a446ed028377629479460a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.8E-40 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0749 69f2e278c1a446ed028377629479460a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0749 69f2e278c1a446ed028377629479460a 179 Pfam PF00281 Ribosomal protein L5 24 80 8.6E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0749 69f2e278c1a446ed028377629479460a 179 PIRSF PIRSF002161 1 179 1.9E-64 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 Gene3D G3DSA:3.90.110.10 171 437 3.5E-94 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 1.3E-51 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 172 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 Gene3D G3DSA:3.40.50.720 1 170 3.3E-64 T 14-10-2018 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 SUPERFAMILY SSF56327 173 436 3.54E-85 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 SUPERFAMILY SSF51735 3 170 1.01E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV2_1050 c41e0240fe568afb4cd4d4f3da456797 437 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 4.1E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VV1_2104 8cd3b29ecc88cd44b7628f15dc2383a7 227 SUPERFAMILY SSF161098 13 205 9.68E-42 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2104 8cd3b29ecc88cd44b7628f15dc2383a7 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 219 2.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2104 8cd3b29ecc88cd44b7628f15dc2383a7 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 114 9.9E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV1_2104 8cd3b29ecc88cd44b7628f15dc2383a7 227 Gene3D G3DSA:1.10.3720.10 1 220 4.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 8.1E-291 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 Gene3D G3DSA:3.40.1770.10 22 544 4.0E-257 T 14-10-2018 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 SUPERFAMILY SSF111326 11 557 3.79E-258 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 Gene3D G3DSA:3.40.50.10730 147 351 4.0E-257 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 Pfam PF17391 Urocanase N-terminal domain 17 143 2.1E-62 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 PIRSF PIRSF001423 1 563 2.0E-294 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.213 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 3.8E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_2390 18e1afe1e66763cb3f3e46dd7b45379c 565 Pfam PF17392 Urocanase C-terminal domain 354 547 1.4E-91 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VV1_1915 b5b2272ab721766c04d9dbf49051373c 233 Gene3D G3DSA:3.30.1380.10 2 187 8.0E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VV1_1915 b5b2272ab721766c04d9dbf49051373c 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 27 179 4.1E-35 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VV1_1915 b5b2272ab721766c04d9dbf49051373c 233 SUPERFAMILY SSF55166 18 176 6.8E-19 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 Pfam PF00231 ATP synthase 5 287 3.5E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 37.018 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 5.5E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 Gene3D G3DSA:3.40.1380.10 61 207 2.2E-111 T 14-10-2018 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.7E-112 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 Gene3D G3DSA:1.10.287.80 6 284 2.2E-111 T 14-10-2018 VV1_1020 4d54bc9f1702fe7dd894b7281e6316c7 288 SUPERFAMILY SSF52943 2 288 1.18E-96 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV2_1497 e9095622eadc0f22715fca5c8aa4882e 548 SUPERFAMILY SSF52540 36 304 1.77E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 Gene3D G3DSA:1.10.10.60 169 268 2.1E-30 T 14-10-2018 VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 Pfam PF02311 AraC-like ligand binding domain 18 144 6.2E-20 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 Pfam PF12833 Helix-turn-helix domain 191 267 5.0E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 SUPERFAMILY SSF51215 27 143 5.36E-19 T 14-10-2018 IPR037923 Transcription regulator HTH-like VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 4.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 4.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 SMART SM00342 185 267 2.2E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 SUPERFAMILY SSF46689 221 267 8.06E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0945 8bcb090b7836cb73504bcc9408b3808b 268 SUPERFAMILY SSF46689 170 218 7.62E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0425 803d751b38b9388a41d35f3905993666 204 Gene3D G3DSA:1.25.40.10 22 203 9.9E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0425 803d751b38b9388a41d35f3905993666 204 SUPERFAMILY SSF48452 89 187 2.34E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0425 803d751b38b9388a41d35f3905993666 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 6.7E-53 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VV1_0425 803d751b38b9388a41d35f3905993666 204 PIRSF PIRSF006170 1 204 4.5E-52 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 SUPERFAMILY SSF50249 2 125 1.37E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 SMART SM01382 124 252 1.7E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.2E-129 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 PIRSF PIRSF002158 13 274 2.0E-101 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 Gene3D G3DSA:2.40.50.140 1 114 2.2E-50 T 14-10-2018 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 6.1E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 Gene3D G3DSA:4.10.950.10 196 274 5.8E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.815 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 SMART SM01383 42 118 3.5E-47 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.0E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 Gene3D G3DSA:2.30.30.30 115 195 1.1E-31 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VV1_0759 c15d807e206cf4d443a8cc0ef803210b 274 SUPERFAMILY SSF50104 127 272 4.03E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VV1_1890 246c39c9a2df3eedf59e9eee8a167e1e 649 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 2.2E-74 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VV1_1890 246c39c9a2df3eedf59e9eee8a167e1e 649 SUPERFAMILY SSF51735 421 547 1.05E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1890 246c39c9a2df3eedf59e9eee8a167e1e 649 Gene3D G3DSA:3.40.50.720 419 578 2.7E-33 T 14-10-2018 VV1_1890 246c39c9a2df3eedf59e9eee8a167e1e 649 Gene3D G3DSA:1.20.1530.20 2 399 2.9E-76 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VV1_1890 246c39c9a2df3eedf59e9eee8a167e1e 649 Pfam PF02254 TrkA-N domain 422 535 2.9E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV1_1890 246c39c9a2df3eedf59e9eee8a167e1e 649 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 3.2E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 6.8E-202 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:3.40.630.30 463 604 4.5E-24 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Pfam PF00206 Lyase 6 301 1.5E-88 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PIRSF PIRSF036456 1 624 0.0 T 14-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.0E-24 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.384 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.0E-67 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.0E-67 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.0E-67 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.0E-67 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.0E-67 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.0E-67 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 SUPERFAMILY SSF48557 3 456 2.67E-141 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Pfam PF00583 Acetyltransferase (GNAT) family 498 572 2.2E-7 T 14-10-2018 IPR000182 GNAT domain VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 SUPERFAMILY SSF55729 461 588 4.43E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:1.20.200.10 108 446 2.8E-147 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:1.10.40.30 363 433 2.8E-147 T 14-10-2018 VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1374 8be5ebac9f0b34d6de2f035633d24645 624 Gene3D G3DSA:1.10.275.10 1 107 1.5E-35 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VV2_0112 8a87b4392863125c5b37bb4a21ea0d6b 251 SMART SM00382 26 213 9.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0112 8a87b4392863125c5b37bb4a21ea0d6b 251 Pfam PF00005 ABC transporter 20 164 1.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0112 8a87b4392863125c5b37bb4a21ea0d6b 251 SUPERFAMILY SSF52540 2 226 2.78E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0112 8a87b4392863125c5b37bb4a21ea0d6b 251 Gene3D G3DSA:3.40.50.300 1 250 4.2E-64 T 14-10-2018 VV2_0112 8a87b4392863125c5b37bb4a21ea0d6b 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 PIRSF PIRSF015592 1 210 2.5E-85 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 211 2.2E-80 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 SUPERFAMILY SSF53182 1 211 3.92E-72 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.438 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 Pfam PF01470 Pyroglutamyl peptidase 3 199 2.7E-74 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 6.3E-44 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 6.3E-44 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 6.3E-44 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 6.3E-44 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 6.3E-44 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VV2_1257 fb13e86a643fa99fb7c1d09e8ce6fbc6 212 Gene3D G3DSA:3.40.630.20 1 212 2.0E-80 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VV1_0035 c8cbab84c77be3914ef6f58c3598fc0d 415 SUPERFAMILY SSF53850 20 414 9.39E-65 T 14-10-2018 VV1_0035 c8cbab84c77be3914ef6f58c3598fc0d 415 Gene3D G3DSA:3.40.190.10 139 396 6.9E-162 T 14-10-2018 VV1_0035 c8cbab84c77be3914ef6f58c3598fc0d 415 Pfam PF01547 Bacterial extracellular solute-binding protein 39 291 4.2E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV1_0035 c8cbab84c77be3914ef6f58c3598fc0d 415 Gene3D G3DSA:3.40.190.10 24 371 6.9E-162 T 14-10-2018 VV1_2987 8de9b5acbbf5047dba88069de64d2e62 227 SUPERFAMILY SSF52540 47 157 1.06E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2987 8de9b5acbbf5047dba88069de64d2e62 227 Gene3D G3DSA:3.40.50.300 51 156 3.0E-27 T 14-10-2018 VV1_2987 8de9b5acbbf5047dba88069de64d2e62 227 PIRSF PIRSF037290 1 227 1.1E-80 T 14-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 VV1_1078 7a4f833744ffbcc11ef2968fe01389c3 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.4E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity VV2_0522 7167dccf2c602a635c2892b89444c08a 119 SUPERFAMILY SSF52833 42 119 2.9E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0522 7167dccf2c602a635c2892b89444c08a 119 Pfam PF13417 Glutathione S-transferase, N-terminal domain 43 119 5.1E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV2_0522 7167dccf2c602a635c2892b89444c08a 119 Gene3D G3DSA:3.40.30.10 21 118 9.1E-14 T 14-10-2018 VV2_1004 4b71c29e008278f11b449588a49bb9fe 230 Pfam PF00005 ABC transporter 26 174 6.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1004 4b71c29e008278f11b449588a49bb9fe 230 Gene3D G3DSA:3.40.50.300 4 230 2.3E-72 T 14-10-2018 VV2_1004 4b71c29e008278f11b449588a49bb9fe 230 SUPERFAMILY SSF52540 6 227 4.64E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1004 4b71c29e008278f11b449588a49bb9fe 230 SMART SM00382 35 222 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1004 4b71c29e008278f11b449588a49bb9fe 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1166 47a4249389cf0c36f942f86bfd2028c7 153 SMART SM00260 1 138 1.5E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_1166 47a4249389cf0c36f942f86bfd2028c7 153 Gene3D G3DSA:2.40.50.180 24 133 2.9E-35 T 14-10-2018 VV2_1166 47a4249389cf0c36f942f86bfd2028c7 153 Pfam PF01584 CheW-like domain 5 140 5.7E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_1166 47a4249389cf0c36f942f86bfd2028c7 153 SUPERFAMILY SSF50341 2 141 5.1E-34 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV2_1166 47a4249389cf0c36f942f86bfd2028c7 153 Gene3D G3DSA:2.30.30.40 8 132 2.9E-35 T 14-10-2018 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 7.6E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 7.6E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 7.6E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 SUPERFAMILY SSF50104 2 115 4.51E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.0E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.566 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 Gene3D G3DSA:2.30.30.790 2 117 1.0E-16 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 PIRSF PIRSF002191 1 117 8.7E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1618 ffe83418104faa07c1a3fa28d4508a6d 117 Pfam PF01245 Ribosomal protein L19 3 113 8.6E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_1031 6d42fea9643003966f3309a3df30b8a9 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 9.0E-4 T 14-10-2018 VV1_1031 6d42fea9643003966f3309a3df30b8a9 94 SUPERFAMILY SSF55021 3 76 1.33E-10 T 14-10-2018 VV1_1031 6d42fea9643003966f3309a3df30b8a9 94 Pfam PF13710 ACT domain 12 73 7.4E-21 T 14-10-2018 VV1_1031 6d42fea9643003966f3309a3df30b8a9 94 Gene3D G3DSA:3.30.70.260 1 90 2.5E-11 T 14-10-2018 VV1_3082 ab8025e258330f2983f739534167c203 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 6.8E-95 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV1_3082 ab8025e258330f2983f739534167c203 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site VV1_3082 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.10.105.10 297 512 5.2E-194 T 14-10-2018 VV1_3082 ab8025e258330f2983f739534167c203 543 PIRSF PIRSF002741 1 543 2.1E-118 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV1_3082 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.90.76.10 72 195 5.2E-194 T 14-10-2018 VV1_3082 ab8025e258330f2983f739534167c203 543 SUPERFAMILY SSF53850 35 530 4.52E-150 T 14-10-2018 VV1_3082 ab8025e258330f2983f739534167c203 543 Gene3D G3DSA:3.40.190.10 42 524 5.2E-194 T 14-10-2018 VV1_1620 d4e705538048b1168d234ba6eff3ae7b 246 Pfam PF07072 Cell division protein 18 224 2.2E-76 T 14-10-2018 IPR009777 Cell division protein ZapD VV1_1620 d4e705538048b1168d234ba6eff3ae7b 246 SUPERFAMILY SSF160950 1 245 8.24E-93 T 14-10-2018 IPR036268 ZapD domain superfamily VV1_1620 d4e705538048b1168d234ba6eff3ae7b 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 33.546 T 14-10-2018 IPR009777 Cell division protein ZapD VV1_1620 d4e705538048b1168d234ba6eff3ae7b 246 Gene3D G3DSA:2.60.440.10 173 245 7.9E-34 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal VV1_1620 d4e705538048b1168d234ba6eff3ae7b 246 Gene3D G3DSA:1.10.3900.10 12 172 2.6E-53 T 14-10-2018 VV1_1680 e70f1ae85673e20bf2996d7e29e23547 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 8.9E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_1680 e70f1ae85673e20bf2996d7e29e23547 364 Gene3D G3DSA:2.40.50.100 77 205 1.3E-49 T 14-10-2018 VV1_1680 e70f1ae85673e20bf2996d7e29e23547 364 Gene3D G3DSA:2.40.420.20 286 352 1.3E-49 T 14-10-2018 VV1_1680 e70f1ae85673e20bf2996d7e29e23547 364 Gene3D G3DSA:2.40.30.170 66 285 1.3E-49 T 14-10-2018 VV1_1680 e70f1ae85673e20bf2996d7e29e23547 364 SUPERFAMILY SSF111369 67 281 1.7E-28 T 14-10-2018 VV1_1680 e70f1ae85673e20bf2996d7e29e23547 364 Gene3D G3DSA:1.10.287.470 112 171 1.3E-49 T 14-10-2018 VV1_1680 e70f1ae85673e20bf2996d7e29e23547 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 354 9.4E-46 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV1_1742 aeaf226fb29f9b5cefc7fac17340db58 561 SUPERFAMILY SSF56801 14 547 8.9E-109 T 14-10-2018 VV1_1742 aeaf226fb29f9b5cefc7fac17340db58 561 Gene3D G3DSA:3.40.50.12780 10 436 9.6E-84 T 14-10-2018 VV1_1742 aeaf226fb29f9b5cefc7fac17340db58 561 Pfam PF00501 AMP-binding enzyme 24 440 5.7E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV1_1742 aeaf226fb29f9b5cefc7fac17340db58 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV2_0816 9a5a31c78bb0e0ae5362ed536570c27a 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 5.7E-80 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VV2_0816 9a5a31c78bb0e0ae5362ed536570c27a 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.3E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0816 9a5a31c78bb0e0ae5362ed536570c27a 243 Gene3D G3DSA:3.40.190.10 109 201 5.1E-74 T 14-10-2018 VV2_0816 9a5a31c78bb0e0ae5362ed536570c27a 243 SUPERFAMILY SSF53850 1 242 5.09E-66 T 14-10-2018 VV2_0816 9a5a31c78bb0e0ae5362ed536570c27a 243 Gene3D G3DSA:3.40.190.10 26 240 5.1E-74 T 14-10-2018 VV2_0816 9a5a31c78bb0e0ae5362ed536570c27a 243 SMART SM00062 22 243 4.7E-72 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0816 9a5a31c78bb0e0ae5362ed536570c27a 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VV2_1593 8cda61ae98638c1b1f37c3b4201f8a86 305 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 176 5.8E-7 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VV2_1593 8cda61ae98638c1b1f37c3b4201f8a86 305 SUPERFAMILY SSF53187 38 288 1.32E-34 T 14-10-2018 VV2_1593 8cda61ae98638c1b1f37c3b4201f8a86 305 Gene3D G3DSA:3.40.630.10 4 305 5.1E-111 T 14-10-2018 VV1_2574 117e14e71b159b7ecd746bda11e4a2cc 239 Gene3D G3DSA:3.40.50.300 4 235 5.1E-53 T 14-10-2018 VV1_2574 117e14e71b159b7ecd746bda11e4a2cc 239 Pfam PF00005 ABC transporter 25 165 9.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2574 117e14e71b159b7ecd746bda11e4a2cc 239 SUPERFAMILY SSF52540 5 217 1.43E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2574 117e14e71b159b7ecd746bda11e4a2cc 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2574 117e14e71b159b7ecd746bda11e4a2cc 239 SMART SM00382 29 213 1.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0986 fd5809ea035b81c4a67ab944f8cd504c 81 Pfam PF01206 Sulfurtransferase TusA 10 79 1.0E-22 T 14-10-2018 IPR001455 TusA-like domain VV1_0986 fd5809ea035b81c4a67ab944f8cd504c 81 SUPERFAMILY SSF64307 9 80 1.29E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily VV1_0986 fd5809ea035b81c4a67ab944f8cd504c 81 Gene3D G3DSA:3.30.110.40 5 80 1.2E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily VV1_0986 fd5809ea035b81c4a67ab944f8cd504c 81 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.815 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VV1_0986 fd5809ea035b81c4a67ab944f8cd504c 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain VV1_1808 174136d83c6dfa8745cf9899334f462b 403 SUPERFAMILY SSF53383 2 399 1.02E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_1808 174136d83c6dfa8745cf9899334f462b 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 400 2.8E-168 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VV1_1808 174136d83c6dfa8745cf9899334f462b 403 Gene3D G3DSA:3.40.640.10 35 295 1.1E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_1808 174136d83c6dfa8745cf9899334f462b 403 Gene3D G3DSA:3.90.1150.10 7 396 1.1E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_1808 174136d83c6dfa8745cf9899334f462b 403 Pfam PF00266 Aminotransferase class-V 24 392 5.8E-149 T 14-10-2018 IPR000192 Aminotransferase class V domain VV1_1808 174136d83c6dfa8745cf9899334f462b 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 1.9E-157 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VV1_1808 174136d83c6dfa8745cf9899334f462b 403 PIRSF PIRSF005572 21 402 3.4E-51 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.0E-30 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 2.3E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 2.3E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 2.3E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 Pfam PF00137 ATP synthase subunit C 10 72 2.6E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.438 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 SUPERFAMILY SSF81333 3 78 3.53E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 Gene3D G3DSA:1.20.20.10 2 77 1.7E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1016 f7543cd3f12c408657867d72e0c5ae46 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VV1_1622 4f7830f402c17f4a8a3817e6d78946da 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.9E-68 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VV1_1622 4f7830f402c17f4a8a3817e6d78946da 202 SUPERFAMILY SSF52540 1 193 6.81E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1622 4f7830f402c17f4a8a3817e6d78946da 202 Gene3D G3DSA:3.40.50.300 1 202 4.1E-67 T 14-10-2018 VV1_1622 4f7830f402c17f4a8a3817e6d78946da 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.772 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VV1_1622 4f7830f402c17f4a8a3817e6d78946da 202 Pfam PF01121 Dephospho-CoA kinase 3 181 2.2E-76 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VV2_0580 35465d53021aa21ed256bbe47914fe61 325 Gene3D G3DSA:2.40.160.10 22 325 2.3E-53 T 14-10-2018 IPR023614 Porin domain superfamily VV2_0580 35465d53021aa21ed256bbe47914fe61 325 SUPERFAMILY SSF56935 22 325 8.55E-49 T 14-10-2018 VV2_0580 35465d53021aa21ed256bbe47914fe61 325 Pfam PF13609 Gram-negative porin 7 301 6.7E-29 T 14-10-2018 VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 194 427 3.0E-10 T 14-10-2018 VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 Pfam PF13353 4Fe-4S single cluster domain 43 160 4.3E-5 T 14-10-2018 VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 316 405 1.2E-16 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 Gene3D G3DSA:3.20.20.70 31 427 2.8E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 Pfam PF04055 Radical SAM superfamily 43 211 9.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 34 423 1.6E-153 T 14-10-2018 VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 Pfam PF13186 Iron-sulfur cluster-binding domain 317 377 1.4E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain VV2_0152 fbed7f944f1d6bcdcd07ff9aaeef0dbe 434 SUPERFAMILY SSF102114 43 386 1.22E-39 T 14-10-2018 VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 SMART SM00347 24 124 3.2E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 Pfam PF01047 MarR family 32 88 7.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 SUPERFAMILY SSF46785 6 136 7.01E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0605 994c9bc41b94d9b1304f993a15da4d1b 138 Gene3D G3DSA:1.10.10.10 1 138 9.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2450 de3b73b011c2801a21e2196956b10f43 254 Gene3D G3DSA:3.40.91.100 127 231 6.6E-10 T 14-10-2018 VV1_2450 de3b73b011c2801a21e2196956b10f43 254 SUPERFAMILY SSF52980 131 250 3.93E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VV1_2450 de3b73b011c2801a21e2196956b10f43 254 Pfam PF04471 Restriction endonuclease 128 248 1.5E-28 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VV1_3035 cdd4eb7395f4f51e96028180010f78e2 474 Pfam PF02335 Cytochrome c552 40 469 4.1E-179 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VV1_3035 cdd4eb7395f4f51e96028180010f78e2 474 Gene3D G3DSA:1.20.140.10 308 450 1.8E-186 T 14-10-2018 VV1_3035 cdd4eb7395f4f51e96028180010f78e2 474 SUPERFAMILY SSF48695 36 469 1.12E-161 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV1_3035 cdd4eb7395f4f51e96028180010f78e2 474 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 35 472 9.1E-248 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VV1_3035 cdd4eb7395f4f51e96028180010f78e2 474 PIRSF PIRSF000243 2 474 6.0E-128 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VV1_3035 cdd4eb7395f4f51e96028180010f78e2 474 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 474 59.232 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VV1_3035 cdd4eb7395f4f51e96028180010f78e2 474 Gene3D G3DSA:1.10.1130.10 39 468 1.8E-186 T 14-10-2018 VV1_2498 2f78dbc9cee02ff35a30d6be8e004fdb 113 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 4.5E-6 T 14-10-2018 IPR009241 Toxin HigB-like VV2_1379 6d685fa8ba186ed611c63fee4fcf3968 301 SUPERFAMILY SSF103481 51 148 1.23E-9 T 14-10-2018 VV2_1379 6d685fa8ba186ed611c63fee4fcf3968 301 Pfam PF00892 EamA-like transporter family 158 298 3.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1379 6d685fa8ba186ed611c63fee4fcf3968 301 Pfam PF00892 EamA-like transporter family 20 147 1.2E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1379 6d685fa8ba186ed611c63fee4fcf3968 301 SUPERFAMILY SSF103481 204 299 1.31E-17 T 14-10-2018 VV2_1109 5661f088c139ac2c274239ba581730d9 488 ProSitePatterns PS00523 Sulfatases signature 1. 53 65 - T 14-10-2018 IPR024607 Sulfatase, conserved site VV2_1109 5661f088c139ac2c274239ba581730d9 488 Pfam PF00884 Sulfatase 7 379 4.9E-69 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV2_1109 5661f088c139ac2c274239ba581730d9 488 Gene3D G3DSA:3.30.1120.10 405 474 6.4E-110 T 14-10-2018 VV2_1109 5661f088c139ac2c274239ba581730d9 488 ProSitePatterns PS00149 Sulfatases signature 2. 100 110 - T 14-10-2018 IPR024607 Sulfatase, conserved site VV2_1109 5661f088c139ac2c274239ba581730d9 488 Pfam PF16385 Domain of unknown function 383 478 1.2E-20 T 14-10-2018 IPR032158 Domain of unknown function DUF4994 VV2_1109 5661f088c139ac2c274239ba581730d9 488 SUPERFAMILY SSF53649 5 483 1.89E-118 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_1109 5661f088c139ac2c274239ba581730d9 488 Gene3D G3DSA:3.40.720.10 7 404 6.4E-110 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 Gene3D G3DSA:3.40.190.10 91 279 9.5E-16 T 14-10-2018 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 SUPERFAMILY SSF53850 89 289 1.68E-25 T 14-10-2018 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 SUPERFAMILY SSF46785 2 110 6.14E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 Gene3D G3DSA:3.40.190.10 163 265 9.5E-16 T 14-10-2018 VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 Pfam PF03466 LysR substrate binding domain 88 290 1.1E-25 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1272 1fbdb4cb40b50e5348278b28651a70b9 291 Gene3D G3DSA:1.10.10.10 4 89 8.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0498 bca571839bd91884830cfc97e05af624 269 Gene3D G3DSA:1.10.12.10 206 267 1.7E-21 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VV2_0498 bca571839bd91884830cfc97e05af624 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 1.1E-49 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VV2_0498 bca571839bd91884830cfc97e05af624 269 SUPERFAMILY SSF52096 12 261 4.83E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV2_0498 bca571839bd91884830cfc97e05af624 269 Gene3D G3DSA:3.90.226.10 4 205 5.9E-63 T 14-10-2018 VV1_1395 311980e28d460ad04b924b7e0bae46e1 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 3.8E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VV1_1395 311980e28d460ad04b924b7e0bae46e1 139 PIRSF PIRSF004681 1 139 1.6E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VV1_1395 311980e28d460ad04b924b7e0bae46e1 139 Gene3D G3DSA:2.60.120.460 2 139 3.4E-44 T 14-10-2018 IPR035917 YjbQ-like superfamily VV1_1395 311980e28d460ad04b924b7e0bae46e1 139 SUPERFAMILY SSF111038 1 139 1.09E-50 T 14-10-2018 IPR035917 YjbQ-like superfamily VV1_1395 311980e28d460ad04b924b7e0bae46e1 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 7.0E-40 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 VV2_0633 24182ab9598a8634de6e6b435d98945f 189 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 183 1.2E-66 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 VV2_0633 24182ab9598a8634de6e6b435d98945f 189 Pfam PF05309 TraE protein 15 183 1.2E-35 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 VV1_1297 d53ea8e0f9c4558ba2b5850919710259 326 SMART SM00244 18 218 1.5E-45 T 14-10-2018 IPR001107 Band 7 domain VV1_1297 d53ea8e0f9c4558ba2b5850919710259 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 5.0E-136 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VV1_1297 d53ea8e0f9c4558ba2b5850919710259 326 PIRSF PIRSF005651 1 326 6.5E-96 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VV1_1297 d53ea8e0f9c4558ba2b5850919710259 326 SUPERFAMILY SSF117892 56 223 1.31E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VV1_1297 d53ea8e0f9c4558ba2b5850919710259 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 9.7E-29 T 14-10-2018 IPR001107 Band 7 domain VV1_1811 a4728b8a70498aeee6452fb6e129d7e0 278 SUPERFAMILY SSF111364 30 278 1.31E-82 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VV1_1811 a4728b8a70498aeee6452fb6e129d7e0 278 Gene3D G3DSA:2.40.230.20 23 278 1.1E-77 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VV1_1811 a4728b8a70498aeee6452fb6e129d7e0 278 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 254 277 7.5E-6 T 14-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 VV1_1811 a4728b8a70498aeee6452fb6e129d7e0 278 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 7.5E-6 T 14-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 VV1_1811 a4728b8a70498aeee6452fb6e129d7e0 278 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 7.5E-6 T 14-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 VV1_1811 a4728b8a70498aeee6452fb6e129d7e0 278 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 278 1.4E-104 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VV1_2004 b18c6498a9861c5a8e18ab147971bc99 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 5.0E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV1_2004 b18c6498a9861c5a8e18ab147971bc99 109 PIRSF PIRSF004555 3 109 2.0E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV1_2004 b18c6498a9861c5a8e18ab147971bc99 109 Gene3D G3DSA:3.30.1310.10 1 109 6.8E-47 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VV1_2004 b18c6498a9861c5a8e18ab147971bc99 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 5.4E-34 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV1_2004 b18c6498a9861c5a8e18ab147971bc99 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.257 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VV1_2004 b18c6498a9861c5a8e18ab147971bc99 109 SUPERFAMILY SSF82607 11 103 5.23E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 SUPERFAMILY SSF103190 54 184 6.67E-21 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 Gene3D G3DSA:3.30.450.20 59 176 3.2E-59 T 14-10-2018 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 Gene3D G3DSA:3.30.450.20 48 265 3.2E-59 T 14-10-2018 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 SUPERFAMILY SSF47384 358 438 2.94E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 SUPERFAMILY SSF55874 443 594 2.88E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 Pfam PF02743 Cache domain 43 215 2.6E-14 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 SMART SM00388 373 441 0.0068 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 590 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 Gene3D G3DSA:1.10.287.130 349 436 8.9E-15 T 14-10-2018 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 Gene3D G3DSA:3.30.565.10 444 596 7.4E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 SMART SM00387 485 593 1.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_1123 dec04df42b757b11338b21b3c2b3aea2 603 PIRSF PIRSF036431 2 600 1.6E-175 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VV1_2222 aad4531297b77dc4f8a5a8b41c68f313 150 Pfam PF04217 Protein of unknown function, DUF412 9 146 8.5E-60 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VV1_2222 aad4531297b77dc4f8a5a8b41c68f313 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 37.537 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 VV2_0506 f13d950cf1d1e6e444b749e0b0af53c0 194 Gene3D G3DSA:1.10.357.10 1 194 7.1E-62 T 14-10-2018 VV2_0506 f13d950cf1d1e6e444b749e0b0af53c0 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0506 f13d950cf1d1e6e444b749e0b0af53c0 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0506 f13d950cf1d1e6e444b749e0b0af53c0 194 SUPERFAMILY SSF46689 2 75 1.18E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0506 f13d950cf1d1e6e444b749e0b0af53c0 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0506 f13d950cf1d1e6e444b749e0b0af53c0 194 SUPERFAMILY SSF48498 80 193 9.85E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV1_0656 d670756f1124bf409d7374af01a598a6 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 3.0E-160 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-50 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 3.8E-266 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 Gene3D G3DSA:3.30.499.20 4 286 7.1E-99 T 14-10-2018 VV1_0656 d670756f1124bf409d7374af01a598a6 466 Gene3D G3DSA:3.30.499.10 328 466 1.1E-48 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.843 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VV1_0656 d670756f1124bf409d7374af01a598a6 466 SUPERFAMILY SSF53732 1 465 9.55E-164 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VV1_0981 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF52096 2 304 6.76E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_0981 168c276418650b859d1625358f5991d8 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 2.8E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_0981 168c276418650b859d1625358f5991d8 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 1.3E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_0981 168c276418650b859d1625358f5991d8 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_0981 168c276418650b859d1625358f5991d8 723 Gene3D G3DSA:1.10.1040.50 498 710 1.9E-73 T 14-10-2018 VV1_0981 168c276418650b859d1625358f5991d8 723 Gene3D G3DSA:3.40.50.720 314 497 4.6E-65 T 14-10-2018 VV1_0981 168c276418650b859d1625358f5991d8 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 8.6E-59 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_0981 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF48179 625 715 1.19E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_0981 168c276418650b859d1625358f5991d8 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV1_0981 168c276418650b859d1625358f5991d8 723 Gene3D G3DSA:3.90.226.10 1 312 1.4E-90 T 14-10-2018 VV1_0981 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF51735 314 496 7.3E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0981 168c276418650b859d1625358f5991d8 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 209 8.0E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VV1_0981 168c276418650b859d1625358f5991d8 723 SUPERFAMILY SSF48179 496 607 1.02E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_0981 168c276418650b859d1625358f5991d8 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.429 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VV2_0008 09ebe47ae2824efa310c56d04763f791 409 Gene3D G3DSA:3.40.390.10 17 242 2.5E-8 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VV2_0008 09ebe47ae2824efa310c56d04763f791 409 SUPERFAMILY SSF55486 21 242 1.54E-17 T 14-10-2018 VV2_0008 09ebe47ae2824efa310c56d04763f791 409 Gene3D G3DSA:2.60.120.260 309 408 3.8E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_0008 09ebe47ae2824efa310c56d04763f791 409 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 45 190 2.4E-30 T 14-10-2018 VV2_0008 09ebe47ae2824efa310c56d04763f791 409 Pfam PF01483 Proprotein convertase P-domain 327 407 3.0E-17 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VV2_0008 09ebe47ae2824efa310c56d04763f791 409 SUPERFAMILY SSF49785 288 408 1.02E-14 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV1_2344 a29830b728c0f96301fd9d32a3cb25c5 165 Pfam PF13505 Outer membrane protein beta-barrel domain 5 164 1.9E-13 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV1_2344 a29830b728c0f96301fd9d32a3cb25c5 165 Gene3D G3DSA:2.40.160.20 18 165 1.8E-23 T 14-10-2018 VV1_2344 a29830b728c0f96301fd9d32a3cb25c5 165 SUPERFAMILY SSF56925 17 164 6.54E-22 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 Gene3D G3DSA:3.40.50.300 26 267 2.0E-83 T 14-10-2018 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 4.1E-169 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 SUPERFAMILY SSF52540 4 266 3.81E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 SMART SM00382 57 228 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 SUPERFAMILY SSF54752 269 325 4.58E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 Pfam PF00154 recA bacterial DNA recombination protein 7 267 9.3E-143 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 Gene3D G3DSA:3.30.250.10 268 344 3.0E-24 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 Hamap MF_00268 Protein RecA [recA]. 5 329 50.162 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 127 156 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 243 272 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 210 238 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 297 314 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 93 122 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1591 88557ca0874a0bd8ca92620ce2c5750f 349 PRINTS PR00142 RecA protein signature 165 194 1.7E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VV1_1275 b14756b367f3b0eaa473db4ec2cb05f2 387 SUPERFAMILY SSF51261 162 385 5.75E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1275 b14756b367f3b0eaa473db4ec2cb05f2 387 Gene3D G3DSA:2.70.70.10 248 386 2.2E-34 T 14-10-2018 IPR011055 Duplicated hybrid motif VV1_1275 b14756b367f3b0eaa473db4ec2cb05f2 387 Pfam PF01551 Peptidase family M23 288 381 3.2E-24 T 14-10-2018 IPR016047 Peptidase M23 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 Gene3D G3DSA:1.10.10.10 74 158 1.2E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 154 7.5E-35 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 42.901 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 SUPERFAMILY SSF53155 3 80 7.85E-20 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 Gene3D G3DSA:3.30.160.70 1 70 9.9E-19 T 14-10-2018 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 71 4.6E-6 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 1.3E-39 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VV2_1209 009ca3c04e82cd70015569b51ad84e1b 161 SUPERFAMILY SSF46767 74 154 7.46E-34 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 Pfam PF01795 MraW methylase family 5 315 4.7E-111 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 Gene3D G3DSA:1.10.150.170 112 218 2.3E-101 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 SUPERFAMILY SSF53335 7 316 2.15E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 315 1.4E-119 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 Gene3D G3DSA:3.40.50.150 10 315 2.3E-101 T 14-10-2018 VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.968 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 SUPERFAMILY SSF81799 113 216 7.98E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VV1_0586 90d0bbb10b4f04564c4576d4c99cf46e 316 PIRSF PIRSF004486 1 316 6.6E-102 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VV1_2416 f2e8ca2837774b5f48ab30541307b0e2 154 SUPERFAMILY SSF51161 15 152 2.08E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_2416 f2e8ca2837774b5f48ab30541307b0e2 154 Gene3D G3DSA:2.160.10.10 6 152 2.9E-36 T 14-10-2018 VV1_2416 f2e8ca2837774b5f48ab30541307b0e2 154 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 63 1.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_2416 f2e8ca2837774b5f48ab30541307b0e2 154 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 103 134 1.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat VV2_1286 980515872ab19c807a3da0b78cca80c0 293 SUPERFAMILY SSF161098 25 293 1.06E-61 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1286 980515872ab19c807a3da0b78cca80c0 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 276 3.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1286 980515872ab19c807a3da0b78cca80c0 293 Gene3D G3DSA:1.10.3720.10 21 284 1.0E-56 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2778 23f6feb72106fa4552df529d1954957b 402 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VV1_2778 23f6feb72106fa4552df529d1954957b 402 Pfam PF07690 Major Facilitator Superfamily 16 352 5.4E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV1_2778 23f6feb72106fa4552df529d1954957b 402 Gene3D G3DSA:1.20.1250.20 6 392 2.9E-48 T 14-10-2018 VV1_2778 23f6feb72106fa4552df529d1954957b 402 SUPERFAMILY SSF103473 6 389 1.31E-53 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0386 5f93faea44bb2e64c4dab81efa171a73 225 SUPERFAMILY SSF53335 17 121 1.45E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV2_0386 5f93faea44bb2e64c4dab81efa171a73 225 PIRSF PIRSF028234 1 225 4.2E-122 T 14-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 VV2_0386 5f93faea44bb2e64c4dab81efa171a73 225 Pfam PF12847 Methyltransferase domain 3 159 8.1E-28 T 14-10-2018 VV2_0386 5f93faea44bb2e64c4dab81efa171a73 225 Gene3D G3DSA:3.40.50.150 2 165 9.9E-47 T 14-10-2018 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.635 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 302 1.1E-95 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 Pfam PF05175 Methyltransferase small domain 135 217 2.4E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.2E-136 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 PIRSF PIRSF037167 2 307 4.2E-148 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 SUPERFAMILY SSF53335 16 293 1.33E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1980 0ef889504fda36e2a382a148780e8d12 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 Gene3D G3DSA:3.40.50.150 106 279 2.1E-45 T 14-10-2018 VV1_1980 0ef889504fda36e2a382a148780e8d12 310 Gene3D G3DSA:1.10.8.10 17 105 1.5E-5 T 14-10-2018 VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 SUPERFAMILY SSF47090 456 530 1.6E-12 T 14-10-2018 IPR036365 PGBD-like superfamily VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 SUPERFAMILY SSF52540 5 264 5.74E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 Pfam PF13401 AAA domain 42 171 1.5E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 Pfam PF01471 Putative peptidoglycan binding domain 470 525 1.5E-6 T 14-10-2018 IPR002477 Peptidoglycan binding-like VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 Pfam PF16537 Type II secretion system protein B 653 712 7.3E-24 T 14-10-2018 IPR032389 Type II secretion system protein B VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 Gene3D G3DSA:3.40.50.300 26 184 4.0E-14 T 14-10-2018 VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 SMART SM00382 42 195 2.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 Gene3D G3DSA:3.90.70.10 344 462 1.7E-46 T 14-10-2018 VV1_0621 4552fb5a2e66b43c5b8b55ce32b8f6d5 718 Gene3D G3DSA:1.10.101.10 463 530 2.7E-27 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 Pfam PF13377 Periplasmic binding protein-like domain 168 308 8.2E-19 T 14-10-2018 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.7E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 SMART SM00354 4 74 2.0E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 2.7E-134 T 14-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:3.40.50.2300 163 279 5.7E-64 T 14-10-2018 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:1.10.260.40 2 60 1.3E-19 T 14-10-2018 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 SUPERFAMILY SSF47413 3 60 2.51E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 Gene3D G3DSA:3.40.50.2300 68 303 5.7E-64 T 14-10-2018 VV1_0290 9a586b4ca2fc27739f28b1d629d3e79c 315 SUPERFAMILY SSF53822 63 308 5.1E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_0474 8a5e48b050c3941ed37a6b39e65148c4 258 PIRSF PIRSF000090 1 258 1.2E-78 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 VV2_0474 8a5e48b050c3941ed37a6b39e65148c4 258 SUPERFAMILY SSF52402 2 251 1.6E-73 T 14-10-2018 VV2_0474 8a5e48b050c3941ed37a6b39e65148c4 258 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 164 184 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 VV2_0474 8a5e48b050c3941ed37a6b39e65148c4 258 SMART SM00893 23 220 1.7E-52 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VV2_0474 8a5e48b050c3941ed37a6b39e65148c4 258 Pfam PF01012 Electron transfer flavoprotein domain 29 214 1.4E-38 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VV2_0474 8a5e48b050c3941ed37a6b39e65148c4 258 Gene3D G3DSA:3.40.50.620 1 256 4.2E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1760 e39e37d261777907c9402ac2d114eec6 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 6.6E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1760 e39e37d261777907c9402ac2d114eec6 301 Gene3D G3DSA:3.40.190.10 174 271 1.8E-47 T 14-10-2018 VV1_1760 e39e37d261777907c9402ac2d114eec6 301 Gene3D G3DSA:1.10.10.10 3 90 3.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1760 e39e37d261777907c9402ac2d114eec6 301 SUPERFAMILY SSF53850 93 298 1.69E-36 T 14-10-2018 VV1_1760 e39e37d261777907c9402ac2d114eec6 301 Gene3D G3DSA:3.40.190.10 97 295 1.8E-47 T 14-10-2018 VV1_1760 e39e37d261777907c9402ac2d114eec6 301 Pfam PF03466 LysR substrate binding domain 97 296 6.0E-25 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1760 e39e37d261777907c9402ac2d114eec6 301 SUPERFAMILY SSF46785 6 84 8.16E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 Gene3D G3DSA:1.20.140.10 232 383 7.2E-56 T 14-10-2018 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 SUPERFAMILY SSF56645 1 240 4.97E-78 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.8E-25 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 SUPERFAMILY SSF47203 225 379 9.5E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 Gene3D G3DSA:1.10.540.10 1 117 3.3E-31 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 PIRSF PIRSF016578 3 192 2.0E-12 T 14-10-2018 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 PIRSF PIRSF016578 211 382 3.7E-15 T 14-10-2018 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.8E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 4.1E-51 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV2_0492 78bb3d6dd6f8cf78e5a4af1a1b88553c 384 Gene3D G3DSA:2.40.110.10 121 231 2.8E-43 T 14-10-2018 VV2_0058 c67ec24af2769c8c0688647876a03972 145 Pfam PF06127 Protein of unknown function (DUF962) 1 141 2.2E-22 T 14-10-2018 IPR009305 Protein of unknown function DUF962 VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.169 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 9.4E-263 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 SMART SM00729 367 617 9.5E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 Pfam PF11842 Domain of unknown function (DUF3362) 585 729 1.2E-42 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 Pfam PF04055 Radical SAM superfamily 371 576 3.9E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 Gene3D G3DSA:3.80.30.20 367 624 4.5E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 Pfam PF08497 Radical SAM N-terminal 24 370 1.8E-143 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VV1_2212 e9ee8d2c2948f8f63a24db516f52c789 768 SUPERFAMILY SSF102114 370 605 2.22E-11 T 14-10-2018 VV1_0351 df1ce216add4005e4327059b4800d7d7 222 PIRSF PIRSF004525 8 222 2.0E-8 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VV2_0841 fecad501d2ef74fb771bdef31feaf661 80 SUPERFAMILY SSF47336 10 75 1.27E-12 T 14-10-2018 IPR036736 ACP-like superfamily VV2_0841 fecad501d2ef74fb771bdef31feaf661 80 ProSitePatterns PS00012 Phosphopantetheine attachment site. 33 48 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site VV2_0841 fecad501d2ef74fb771bdef31feaf661 80 Gene3D G3DSA:1.10.1200.10 3 77 1.1E-21 T 14-10-2018 IPR036736 ACP-like superfamily VV2_0841 fecad501d2ef74fb771bdef31feaf661 80 Pfam PF00550 Phosphopantetheine attachment site 10 68 1.5E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VV2_0338 573c7a8cb9c71576d86a0e21a93ad1d9 297 SUPERFAMILY SSF56219 27 295 1.83E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV2_0338 573c7a8cb9c71576d86a0e21a93ad1d9 297 Gene3D G3DSA:3.60.10.10 24 295 7.5E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV2_0338 573c7a8cb9c71576d86a0e21a93ad1d9 297 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 287 1.2E-6 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV1_1549 7b1ed4ca84ac9637c21b9fec3b168965 103 Gene3D G3DSA:1.10.20.30 1 47 7.7E-20 T 14-10-2018 VV1_1549 7b1ed4ca84ac9637c21b9fec3b168965 103 Pfam PF05164 Cell division protein ZapA 6 89 3.8E-19 T 14-10-2018 IPR007838 Cell division protein ZapA-like VV1_1549 7b1ed4ca84ac9637c21b9fec3b168965 103 SUPERFAMILY SSF102829 6 94 6.28E-23 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily VV1_1549 7b1ed4ca84ac9637c21b9fec3b168965 103 Gene3D G3DSA:1.20.5.50 53 102 2.7E-5 T 14-10-2018 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 Pfam PF00085 Thioredoxin 5 106 1.0E-32 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 PIRSF PIRSF000077 2 108 2.2E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.9E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 SUPERFAMILY SSF52833 3 107 5.96E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 Gene3D G3DSA:3.40.30.10 1 108 9.8E-35 T 14-10-2018 VV1_0938 7a5a6dbc823aa0a99beec5e9f72ab496 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV1_0560 3e257674e7e2a2ff0344833a3b4ffb84 273 Gene3D G3DSA:3.40.50.1980 141 268 4.8E-27 T 14-10-2018 VV1_0560 3e257674e7e2a2ff0344833a3b4ffb84 273 SUPERFAMILY SSF53807 20 266 7.06E-58 T 14-10-2018 VV1_0560 3e257674e7e2a2ff0344833a3b4ffb84 273 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 270 51.643 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VV1_0560 3e257674e7e2a2ff0344833a3b4ffb84 273 Pfam PF01497 Periplasmic binding protein 24 245 1.4E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VV1_0560 3e257674e7e2a2ff0344833a3b4ffb84 273 Gene3D G3DSA:3.40.50.1980 21 136 1.7E-33 T 14-10-2018 VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00862 158 234 3.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00072 Response regulator receiver domain 5 113 3.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 SMART SM00448 3 113 6.7E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:3.40.50.2300 1 136 2.7E-33 T 14-10-2018 VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF46894 133 235 6.24E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 SUPERFAMILY SSF52172 2 123 1.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2140 6851d7110dd52664c799cabd947f4b3d 237 Gene3D G3DSA:1.10.10.10 137 237 1.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0305 e020e62407947baf1b17f4ea1b09fb1a 208 SUPERFAMILY SSF53474 9 179 6.87E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0305 e020e62407947baf1b17f4ea1b09fb1a 208 Pfam PF12697 Alpha/beta hydrolase family 16 134 9.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0305 e020e62407947baf1b17f4ea1b09fb1a 208 Gene3D G3DSA:3.40.50.1820 14 202 4.9E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 Gene3D G3DSA:3.30.70.920 53 147 2.1E-24 T 14-10-2018 VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 3.0E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.5E-20 T 14-10-2018 VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 SMART SM00344 1 110 2.3E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 Gene3D G3DSA:1.10.10.10 1 52 2.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 SUPERFAMILY SSF54909 63 149 1.32E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 SUPERFAMILY SSF46785 1 60 4.21E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV2_0749 76e1cd9ecf496bcbe087f8f1a10f4533 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.8E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VV1_1519 b59fbef8ca234c6c5fe9d939289c7e6b 389 Gene3D G3DSA:3.80.30.20 2 306 6.2E-97 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VV1_1519 b59fbef8ca234c6c5fe9d939289c7e6b 389 SUPERFAMILY SSF102114 4 386 2.49E-111 T 14-10-2018 VV1_1519 b59fbef8ca234c6c5fe9d939289c7e6b 389 SMART SM00729 6 227 6.2E-56 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV1_1519 b59fbef8ca234c6c5fe9d939289c7e6b 389 Pfam PF06969 HemN C-terminal domain 314 374 2.2E-7 T 14-10-2018 IPR010723 HemN, C-terminal VV1_1519 b59fbef8ca234c6c5fe9d939289c7e6b 389 Pfam PF04055 Radical SAM superfamily 11 181 2.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_1519 b59fbef8ca234c6c5fe9d939289c7e6b 389 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 3.2E-136 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 VV2_0378 33dac593b9c9d3998152b7fd4cdbdfc0 193 Gene3D G3DSA:3.40.50.180 2 192 1.5E-61 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VV2_0378 33dac593b9c9d3998152b7fd4cdbdfc0 193 SUPERFAMILY SSF52738 6 191 1.96E-57 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal VV2_0378 33dac593b9c9d3998152b7fd4cdbdfc0 193 Pfam PF01339 CheB methylesterase 11 186 1.3E-55 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 3.1E-20 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 SMART SM00382 344 514 3.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 SMART SM00382 28 230 2.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 Pfam PF00005 ABC transporter 19 185 1.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 SUPERFAMILY SSF52540 312 521 4.56E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 Gene3D G3DSA:3.40.50.300 281 551 3.5E-68 T 14-10-2018 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 Gene3D G3DSA:1.10.287.380 555 638 1.1E-27 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 Pfam PF12848 ABC transporter 224 296 3.3E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 Pfam PF00005 ABC transporter 336 469 1.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 SUPERFAMILY SSF52540 4 238 3.58E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2632 e098cc8829054475fd882cbfea5cbdce 639 Gene3D G3DSA:3.40.50.300 7 279 1.7E-66 T 14-10-2018 VV1_0980 7e76e337c399e974ef10b98d41e06b8e 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 198 1.8E-12 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VV1_0980 7e76e337c399e974ef10b98d41e06b8e 207 SUPERFAMILY SSF54980 139 201 1.73E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like VV1_0980 7e76e337c399e974ef10b98d41e06b8e 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 6.8E-27 T 14-10-2018 IPR001498 Impact, N-terminal VV1_0980 7e76e337c399e974ef10b98d41e06b8e 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 199 2.7E-69 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal VV1_0980 7e76e337c399e974ef10b98d41e06b8e 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VV1_0980 7e76e337c399e974ef10b98d41e06b8e 207 SUPERFAMILY SSF54211 5 134 2.96E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0980 7e76e337c399e974ef10b98d41e06b8e 207 Gene3D G3DSA:3.30.230.30 2 136 4.6E-50 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily VV2_1424 c0f4ab5f4aa0ad34f8bcd108015972e9 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 2.4E-22 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VV2_1424 c0f4ab5f4aa0ad34f8bcd108015972e9 200 Gene3D G3DSA:3.40.30.10 18 200 1.5E-51 T 14-10-2018 VV2_1424 c0f4ab5f4aa0ad34f8bcd108015972e9 200 SUPERFAMILY SSF52833 23 198 4.29E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1424 c0f4ab5f4aa0ad34f8bcd108015972e9 200 PIRSF PIRSF001488 2 200 7.4E-63 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VV2_1424 c0f4ab5f4aa0ad34f8bcd108015972e9 200 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV2_0915 685e2b5522ceca89e3215905f5c8413d 260 Gene3D G3DSA:1.10.10.10 4 77 3.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0915 685e2b5522ceca89e3215905f5c8413d 260 Pfam PF01614 Bacterial transcriptional regulator 126 251 9.6E-39 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VV2_0915 685e2b5522ceca89e3215905f5c8413d 260 SUPERFAMILY SSF46785 10 81 5.64E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0915 685e2b5522ceca89e3215905f5c8413d 260 Gene3D G3DSA:3.30.450.40 83 260 1.1E-58 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_0915 685e2b5522ceca89e3215905f5c8413d 260 Pfam PF09339 IclR helix-turn-helix domain 12 62 1.0E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VV2_0915 685e2b5522ceca89e3215905f5c8413d 260 SUPERFAMILY SSF55781 74 256 4.25E-50 T 14-10-2018 VV2_0915 685e2b5522ceca89e3215905f5c8413d 260 SMART SM00346 10 99 1.6E-28 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VV1_1864 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.595 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VV1_1864 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 6.0E-93 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VV1_1864 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 6.7E-81 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VV1_1864 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 SUPERFAMILY SSF64005 8 233 1.44E-89 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VV1_1864 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 Gene3D G3DSA:3.40.1180.10 1 239 4.3E-96 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VV1_1864 1303e7ab0b5473cc7cb1f9ae6e1a7e4d 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VV1_0521 66a20e14834da53b08fb752382e33868 227 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 4 219 7.4E-100 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VV1_0521 66a20e14834da53b08fb752382e33868 227 Gene3D G3DSA:3.40.600.10 2 221 1.6E-54 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VV1_0521 66a20e14834da53b08fb752382e33868 227 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.1E-33 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VV1_0521 66a20e14834da53b08fb752382e33868 227 SUPERFAMILY SSF52980 2 220 3.11E-83 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VV1_0521 66a20e14834da53b08fb752382e33868 227 SMART SM00927 53 151 3.1E-64 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VV1_0521 66a20e14834da53b08fb752382e33868 227 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 227 149.26 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VV2_0558 7a3d1dfb7e2d24f0ba47d00d70a1910f 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 9.1E-171 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV2_0558 7a3d1dfb7e2d24f0ba47d00d70a1910f 350 PIRSF PIRSF001361 1 350 7.2E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV2_0558 7a3d1dfb7e2d24f0ba47d00d70a1910f 350 Pfam PF00793 DAHP synthetase I family 38 337 2.1E-108 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV2_0558 7a3d1dfb7e2d24f0ba47d00d70a1910f 350 Gene3D G3DSA:3.20.20.70 1 349 1.9E-166 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0558 7a3d1dfb7e2d24f0ba47d00d70a1910f 350 SUPERFAMILY SSF51569 6 347 1.15E-139 T 14-10-2018 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.686 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 SUPERFAMILY SSF51735 1 268 5.44E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 Gene3D G3DSA:3.40.50.720 3 264 7.1E-102 T 14-10-2018 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.1E-44 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 Gene3D G3DSA:3.30.360.10 127 234 7.1E-102 T 14-10-2018 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 3.4E-99 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.6E-40 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 SUPERFAMILY SSF55347 127 236 1.46E-37 T 14-10-2018 VV1_0567 5366b091d26a4015eaeb851b8f7b018d 269 PIRSF PIRSF000161 1 268 5.6E-90 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV2_0435 0ed6dc9b4483357c7c0f7c63cb9da083 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 61 491 6.3E-162 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VV2_0435 0ed6dc9b4483357c7c0f7c63cb9da083 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 46 491 8.5E-136 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VV1_1026 3b35b9a9957ec1b7d074c10ff85eb077 401 Gene3D G3DSA:1.20.1720.10 8 377 4.6E-72 T 14-10-2018 VV1_1026 3b35b9a9957ec1b7d074c10ff85eb077 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 3.6E-81 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VV1_1026 3b35b9a9957ec1b7d074c10ff85eb077 401 SUPERFAMILY SSF103473 6 376 5.23E-51 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_1026 3b35b9a9957ec1b7d074c10ff85eb077 401 Pfam PF07690 Major Facilitator Superfamily 13 349 1.7E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_1076 cad96782134d369e09bea6e994d2aa1c 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 7.9E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV2_1076 cad96782134d369e09bea6e994d2aa1c 209 Gene3D G3DSA:1.20.1050.10 93 209 2.8E-24 T 14-10-2018 VV2_1076 cad96782134d369e09bea6e994d2aa1c 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 6.3E-92 T 14-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 VV2_1076 cad96782134d369e09bea6e994d2aa1c 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 4.5E-35 T 14-10-2018 IPR007494 Glutaredoxin 2, C-terminal VV2_1076 cad96782134d369e09bea6e994d2aa1c 209 SUPERFAMILY SSF47616 77 208 1.29E-42 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV2_1076 cad96782134d369e09bea6e994d2aa1c 209 Gene3D G3DSA:3.40.30.10 8 83 2.4E-24 T 14-10-2018 VV2_1076 cad96782134d369e09bea6e994d2aa1c 209 SUPERFAMILY SSF52833 1 69 5.99E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0984 d5829d4054f42f453b5c8b1d834fd843 706 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 611 5.4E-73 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV2_0984 d5829d4054f42f453b5c8b1d834fd843 706 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 2.7E-209 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VV1_0249 dff37732f3f6734e69f51e208f9ffd83 284 Pfam PF00793 DAHP synthetase I family 11 276 1.7E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV1_0249 dff37732f3f6734e69f51e208f9ffd83 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 278 48.368 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV1_0249 dff37732f3f6734e69f51e208f9ffd83 284 SUPERFAMILY SSF51569 3 279 7.97E-105 T 14-10-2018 VV1_0249 dff37732f3f6734e69f51e208f9ffd83 284 Gene3D G3DSA:3.20.20.70 1 284 6.0E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0249 dff37732f3f6734e69f51e208f9ffd83 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 276 2.3E-116 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 Gene3D G3DSA:3.30.70.270 177 352 2.6E-37 T 14-10-2018 VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 333 3.4E-28 T 14-10-2018 IPR000160 GGDEF domain VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 SMART SM00052 347 599 8.6E-69 T 14-10-2018 IPR001633 EAL domain VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 Gene3D G3DSA:3.20.20.450 353 607 5.2E-72 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 Pfam PF00563 EAL domain 367 594 2.5E-55 T 14-10-2018 IPR001633 EAL domain VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 SMART SM00267 172 337 1.4E-27 T 14-10-2018 IPR000160 GGDEF domain VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 SUPERFAMILY SSF141868 368 605 2.62E-69 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 183 336 2.1E-25 T 14-10-2018 IPR000160 GGDEF domain VV2_0588 f07aed3f5860c7d2674d44112aeac65d 613 SUPERFAMILY SSF55073 188 338 4.24E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0741 80f86241c722376668b9d866b218dc4c 402 Pfam PF00108 Thiolase, N-terminal domain 4 263 4.2E-99 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VV2_0741 80f86241c722376668b9d866b218dc4c 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 VV2_0741 80f86241c722376668b9d866b218dc4c 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 2.5E-148 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV2_0741 80f86241c722376668b9d866b218dc4c 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VV2_0741 80f86241c722376668b9d866b218dc4c 402 SUPERFAMILY SSF53901 271 399 9.02E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0741 80f86241c722376668b9d866b218dc4c 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VV2_0741 80f86241c722376668b9d866b218dc4c 402 Pfam PF02803 Thiolase, C-terminal domain 271 399 1.6E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VV2_0741 80f86241c722376668b9d866b218dc4c 402 Gene3D G3DSA:3.40.47.10 6 276 1.7E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0741 80f86241c722376668b9d866b218dc4c 402 PIRSF PIRSF000429 1 402 1.7E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 VV2_0741 80f86241c722376668b9d866b218dc4c 402 Gene3D G3DSA:3.40.47.10 126 398 1.7E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0741 80f86241c722376668b9d866b218dc4c 402 SUPERFAMILY SSF53901 4 270 1.55E-83 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_2174 0daca497d9ed7ef673df15cb7274c5c7 346 Gene3D G3DSA:3.40.50.720 112 233 1.3E-11 T 14-10-2018 VV1_2174 0daca497d9ed7ef673df15cb7274c5c7 346 SUPERFAMILY SSF81324 3 132 2.09E-19 T 14-10-2018 VV1_2174 0daca497d9ed7ef673df15cb7274c5c7 346 SUPERFAMILY SSF51735 121 240 3.64E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2174 0daca497d9ed7ef673df15cb7274c5c7 346 Pfam PF07885 Ion channel 26 103 7.0E-14 T 14-10-2018 IPR013099 Potassium channel domain VV1_2174 0daca497d9ed7ef673df15cb7274c5c7 346 Gene3D G3DSA:1.10.287.70 19 104 7.6E-14 T 14-10-2018 VV1_1759 2c944e42f31ac8ce05bc5fcc54c36301 383 PIRSF PIRSF004810 1 383 2.5E-122 T 14-10-2018 IPR014047 Chromate transporter, long chain VV1_1759 2c944e42f31ac8ce05bc5fcc54c36301 383 Pfam PF02417 Chromate transporter 214 375 4.6E-36 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VV1_1759 2c944e42f31ac8ce05bc5fcc54c36301 383 Pfam PF02417 Chromate transporter 5 171 2.9E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VV1_1759 2c944e42f31ac8ce05bc5fcc54c36301 383 TIGRFAM TIGR00937 2A51: chromate efflux transporter 11 377 1.1E-94 T 14-10-2018 IPR014047 Chromate transporter, long chain VV1_1478 86a537562343589690563962347ecaa4 357 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 8.3E-133 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VV1_1478 86a537562343589690563962347ecaa4 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 1.5E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VV1_2584 590c3d303318f91cf075680b20838a93 275 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 25.515 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VV1_2584 590c3d303318f91cf075680b20838a93 275 Pfam PF02634 FdhD/NarQ family 35 266 3.0E-73 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VV1_2584 590c3d303318f91cf075680b20838a93 275 SUPERFAMILY SSF53927 15 267 2.56E-70 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV1_2584 590c3d303318f91cf075680b20838a93 275 Gene3D G3DSA:3.40.140.10 122 274 5.3E-42 T 14-10-2018 VV1_2584 590c3d303318f91cf075680b20838a93 275 PIRSF PIRSF015626 1 271 7.6E-97 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VV1_2584 590c3d303318f91cf075680b20838a93 275 Gene3D G3DSA:3.10.20.10 36 118 5.5E-10 T 14-10-2018 VV1_0965 79b5a9b63c5d95360ab7c6895d97309d 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 4.6E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VV1_0965 79b5a9b63c5d95360ab7c6895d97309d 126 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 4.1E-29 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VV1_0965 79b5a9b63c5d95360ab7c6895d97309d 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.031 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VV2_0788 433a5a8ec4c93db5cb271b71e02e8150 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 5.3E-64 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VV2_0788 433a5a8ec4c93db5cb271b71e02e8150 412 Gene3D G3DSA:1.10.4160.10 3 409 1.3E-46 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 Gene3D G3DSA:3.30.360.10 153 312 4.0E-115 T 14-10-2018 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 SMART SM00859 3 146 1.2E-44 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 Gene3D G3DSA:3.40.50.720 6 327 4.0E-115 T 14-10-2018 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 SUPERFAMILY SSF55347 154 308 1.96E-46 T 14-10-2018 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 SUPERFAMILY SSF51735 1 167 6.84E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.038 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 311 3.1E-11 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 2.4E-29 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VV1_1371 7c763f6fe935f46cc9c4e7035032a2a2 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 7.5E-113 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VV2_0441 e5ba13d8e80bf0c75c8d98a08d3ad55f 1174 SUPERFAMILY SSF52540 120 305 8.11E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0441 e5ba13d8e80bf0c75c8d98a08d3ad55f 1174 Pfam PF06761 Intracellular multiplication and human macrophage-killing 505 804 3.7E-71 T 14-10-2018 IPR009612 ImcF-related VV2_0441 e5ba13d8e80bf0c75c8d98a08d3ad55f 1174 Pfam PF06744 Type VI secretion protein IcmF C-terminal 929 1122 6.0E-57 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VV2_0441 e5ba13d8e80bf0c75c8d98a08d3ad55f 1174 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 18 1172 0.0 T 14-10-2018 IPR017731 Type VI secretion system, IcmF VV2_0441 e5ba13d8e80bf0c75c8d98a08d3ad55f 1174 Gene3D G3DSA:3.40.50.300 128 317 3.5E-6 T 14-10-2018 VV2_0441 e5ba13d8e80bf0c75c8d98a08d3ad55f 1174 Pfam PF14331 ImcF-related N-terminal domain 194 451 1.5E-89 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Pfam PF00136 DNA polymerase family B 378 746 1.9E-42 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 86 298 1.7E-15 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 SUPERFAMILY SSF53098 5 391 1.05E-85 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Gene3D G3DSA:3.90.1600.10 442 638 4.6E-56 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Gene3D G3DSA:3.90.1600.10 350 441 2.2E-29 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 SUPERFAMILY SSF56672 387 784 4.17E-114 T 14-10-2018 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 ProSitePatterns PS00116 DNA polymerase family B signature. 548 556 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Gene3D G3DSA:3.30.420.10 158 349 9.8E-72 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Gene3D G3DSA:2.40.50.590 6 155 3.7E-40 T 14-10-2018 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 SMART SM00486 155 560 4.4E-61 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Gene3D G3DSA:1.10.132.60 645 789 2.9E-59 T 14-10-2018 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 Gene3D G3DSA:3.30.70.2250 41 110 3.7E-40 T 14-10-2018 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 546 554 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 494 506 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_3055 4b64508150e87620f7aad59164d7e58b 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0140 ef6f023752df95fd339344d8d6d79542 233 Gene3D G3DSA:3.30.420.40 5 201 5.3E-84 T 14-10-2018 VV1_0140 ef6f023752df95fd339344d8d6d79542 233 Pfam PF00814 Glycoprotease family 30 227 1.3E-31 T 14-10-2018 IPR000905 Gcp-like domain VV1_0140 ef6f023752df95fd339344d8d6d79542 233 SUPERFAMILY SSF53067 4 106 3.37E-31 T 14-10-2018 VV1_0140 ef6f023752df95fd339344d8d6d79542 233 SUPERFAMILY SSF53067 111 219 6.22E-29 T 14-10-2018 VV1_0140 ef6f023752df95fd339344d8d6d79542 233 Gene3D G3DSA:3.30.420.40 96 190 5.3E-84 T 14-10-2018 VV1_0140 ef6f023752df95fd339344d8d6d79542 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 2.3E-69 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 VV1_1329 1c0636c55914d38e89601a52d017efba 75 Gene3D G3DSA:1.20.5.300 3 53 3.1E-7 T 14-10-2018 VV1_1329 1c0636c55914d38e89601a52d017efba 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.621 T 14-10-2018 IPR007236 SlyX VV1_1329 1c0636c55914d38e89601a52d017efba 75 Pfam PF04102 SlyX 9 75 9.9E-25 T 14-10-2018 IPR007236 SlyX VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 Gene3D G3DSA:3.40.47.10 2 242 1.3E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 SMART SM00825 Beta-ketoacyl synthase 35 338 2.0E-7 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 Gene3D G3DSA:3.40.47.10 246 389 2.9E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 76 236 5.9E-21 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 SUPERFAMILY SSF53901 210 391 2.18E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 SUPERFAMILY SSF53901 7 236 6.58E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 344 5.4E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VV1_0058 5471b6b95295ad7f2c5774167b6061ee 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VV1_3211 525154eb80fcb189c94b8e9da752b16f 76 Gene3D G3DSA:2.10.290.10 2 71 2.0E-27 T 14-10-2018 IPR029037 YfgJ-like VV1_3211 525154eb80fcb189c94b8e9da752b16f 76 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 2.0E-31 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VV1_3211 525154eb80fcb189c94b8e9da752b16f 76 Pfam PF07191 zinc-ribbons 5 68 8.2E-28 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 VV1_3211 525154eb80fcb189c94b8e9da752b16f 76 SUPERFAMILY SSF161187 3 70 3.4E-27 T 14-10-2018 VV1_0895 bf32e362077307c744dd090a6c94d525 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 4.6E-45 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 Gene3D G3DSA:3.20.20.70 1 292 1.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 SUPERFAMILY SSF51569 2 290 6.38E-100 T 14-10-2018 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 SMART SM01130 1 290 2.1E-140 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 6.4E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 PIRSF PIRSF001365 1 291 6.1E-94 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.059 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 5.0E-108 T 14-10-2018 IPR002220 DapA-like GO:0016829 VV1_1912 ed5a67a94be55d8d1bb0f6e7292d8795 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 4.5E-117 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VV1_2784 a8af333289e110b656c072e186033345 599 Gene3D G3DSA:1.20.140.70 12 159 4.6E-10 T 14-10-2018 VV1_2784 a8af333289e110b656c072e186033345 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.6E-218 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VV1_2784 a8af333289e110b656c072e186033345 599 Pfam PF08439 Oligopeptidase F 106 174 5.3E-10 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain VV1_2784 a8af333289e110b656c072e186033345 599 Pfam PF01432 Peptidase family M3 339 580 1.1E-21 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VV1_2784 a8af333289e110b656c072e186033345 599 SUPERFAMILY SSF55486 5 580 5.22E-90 T 14-10-2018 VV1_2784 a8af333289e110b656c072e186033345 599 Gene3D G3DSA:1.10.1370.20 219 597 2.8E-106 T 14-10-2018 VV1_2320 0ba9f10e6e441e72ef09bd0bc106e3fd 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 1.1E-53 T 14-10-2018 IPR021212 Domain of unknown function DUF2760 VV1_0440 fd9842cf51db04c61394bf00e3efc61b 242 PIRSF PIRSF004808 1 242 1.2E-73 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VV1_0440 fd9842cf51db04c61394bf00e3efc61b 242 SUPERFAMILY SSF75217 5 175 2.88E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases VV1_0440 fd9842cf51db04c61394bf00e3efc61b 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 7.7E-83 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VV1_0440 fd9842cf51db04c61394bf00e3efc61b 242 Gene3D G3DSA:3.40.1280.10 1 166 2.5E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VV1_0440 fd9842cf51db04c61394bf00e3efc61b 242 Gene3D G3DSA:1.10.8.590 173 242 1.5E-28 T 14-10-2018 VV1_0440 fd9842cf51db04c61394bf00e3efc61b 242 Pfam PF00588 SpoU rRNA Methylase family 5 153 7.7E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VV1_1375 71629052724381763305884815b5cc88 299 SUPERFAMILY SSF53850 89 293 3.06E-38 T 14-10-2018 VV1_1375 71629052724381763305884815b5cc88 299 Gene3D G3DSA:3.40.190.10 164 267 9.1E-65 T 14-10-2018 VV1_1375 71629052724381763305884815b5cc88 299 Gene3D G3DSA:1.10.10.10 1 84 5.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1375 71629052724381763305884815b5cc88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1375 71629052724381763305884815b5cc88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1375 71629052724381763305884815b5cc88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1375 71629052724381763305884815b5cc88 299 Pfam PF03466 LysR substrate binding domain 89 292 3.6E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_1375 71629052724381763305884815b5cc88 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.6E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1375 71629052724381763305884815b5cc88 299 SUPERFAMILY SSF46785 1 86 3.98E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1375 71629052724381763305884815b5cc88 299 Gene3D G3DSA:3.40.190.10 91 281 9.1E-65 T 14-10-2018 VV1_1693 5e54b0f8cdbd829ae08cafb16bc09115 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.8E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV1_1693 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV1_1693 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV1_1693 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV1_1693 5e54b0f8cdbd829ae08cafb16bc09115 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV1_1693 5e54b0f8cdbd829ae08cafb16bc09115 110 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.7E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VV2_0644 259552b72afe221cb39a41ce8592c4d5 235 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 106 216 2.0E-24 T 14-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC VV2_0644 259552b72afe221cb39a41ce8592c4d5 235 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 104 234 3.3E-50 T 14-10-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup VV1_0733 8001a2604fe790af84300cb4b43b5bbe 186 Gene3D G3DSA:3.10.50.40 48 186 3.6E-49 T 14-10-2018 VV1_0733 8001a2604fe790af84300cb4b43b5bbe 186 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 96 183 3.5E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VV1_0733 8001a2604fe790af84300cb4b43b5bbe 186 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 88 7.1E-15 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VV1_0733 8001a2604fe790af84300cb4b43b5bbe 186 Gene3D G3DSA:1.10.287.460 1 47 9.0E-8 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VV1_0733 8001a2604fe790af84300cb4b43b5bbe 186 SUPERFAMILY SSF54534 14 185 2.55E-51 T 14-10-2018 VV1_0535 8171fd0b267cf94a448698c43f6d7836 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.717 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VV1_0535 8171fd0b267cf94a448698c43f6d7836 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 9.8E-94 T 14-10-2018 IPR005583 Peroxide stress protein YaaA VV1_1455 4495ae5fa345e26459ab424769334cb1 274 Gene3D G3DSA:3.60.110.10 1 269 1.2E-92 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV1_1455 4495ae5fa345e26459ab424769334cb1 274 SUPERFAMILY SSF56317 3 263 1.02E-83 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VV1_1455 4495ae5fa345e26459ab424769334cb1 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VV1_1455 4495ae5fa345e26459ab424769334cb1 274 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 5.0E-58 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VV2_0469 05a2b0716ee0f606d0b686b391681103 364 Pfam PF00676 Dehydrogenase E1 component 36 320 4.3E-78 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VV2_0469 05a2b0716ee0f606d0b686b391681103 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 9.1E-138 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VV2_0469 05a2b0716ee0f606d0b686b391681103 364 SUPERFAMILY SSF52518 7 352 6.47E-95 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV2_0469 05a2b0716ee0f606d0b686b391681103 364 Gene3D G3DSA:3.40.50.970 1 351 2.0E-104 T 14-10-2018 VV1_1005 36d2d124c11e1c31eac96ea0a59feeec 118 Gene3D G3DSA:3.30.230.10 1 118 4.1E-41 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_1005 36d2d124c11e1c31eac96ea0a59feeec 118 SUPERFAMILY SSF54211 4 114 6.07E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_1005 36d2d124c11e1c31eac96ea0a59feeec 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 2.0E-46 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV1_1005 36d2d124c11e1c31eac96ea0a59feeec 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 VV1_1005 36d2d124c11e1c31eac96ea0a59feeec 118 Pfam PF00825 Ribonuclease P 6 112 1.2E-32 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV1_1005 36d2d124c11e1c31eac96ea0a59feeec 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 3.4E-28 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV1_1005 36d2d124c11e1c31eac96ea0a59feeec 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.466 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VV1_1791 f73f735e086a51194b4a51b781e391b5 104 Pfam PF07130 YebG protein 1 72 1.7E-31 T 14-10-2018 IPR009813 Uncharacterised protein family YebG VV1_1791 f73f735e086a51194b4a51b781e391b5 104 Gene3D G3DSA:1.10.10.710 21 102 9.4E-8 T 14-10-2018 IPR038627 YebG-like superfamily VV1_1922 ee8cbc7e16314a979d4e259cc0dec802 300 SUPERFAMILY SSF54909 1 296 4.65E-93 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_1922 ee8cbc7e16314a979d4e259cc0dec802 300 Pfam PF04261 Dyp-type peroxidase family 5 293 3.4E-89 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VV1_1922 ee8cbc7e16314a979d4e259cc0dec802 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 3.3E-85 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VV1_0529 92e0cc52e86d19c17af68881e3447e15 261 SUPERFAMILY SSF54423 44 99 2.49E-13 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VV1_0529 92e0cc52e86d19c17af68881e3447e15 261 Gene3D G3DSA:3.10.450.70 37 97 5.2E-19 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VV1_0529 92e0cc52e86d19c17af68881e3447e15 261 Pfam PF13098 Thioredoxin-like domain 130 258 2.8E-24 T 14-10-2018 IPR012336 Thioredoxin-like fold VV1_0529 92e0cc52e86d19c17af68881e3447e15 261 Pfam PF10411 Disulfide bond isomerase protein N-terminus 48 98 1.0E-12 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VV1_0529 92e0cc52e86d19c17af68881e3447e15 261 ProSitePatterns PS00194 Thioredoxin family active site. 137 155 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV1_0529 92e0cc52e86d19c17af68881e3447e15 261 Gene3D G3DSA:3.40.30.10 98 261 5.6E-45 T 14-10-2018 VV1_0529 92e0cc52e86d19c17af68881e3447e15 261 SUPERFAMILY SSF52833 120 260 2.27E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_1953 3d34106297586cfdb639d3ca42c52f96 126 Pfam PF00072 Response regulator receiver domain 7 119 1.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1953 3d34106297586cfdb639d3ca42c52f96 126 SMART SM00448 5 119 6.5E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1953 3d34106297586cfdb639d3ca42c52f96 126 Gene3D G3DSA:3.40.50.2300 1 126 1.5E-40 T 14-10-2018 VV1_1953 3d34106297586cfdb639d3ca42c52f96 126 SUPERFAMILY SSF52172 3 124 7.54E-38 T 14-10-2018 IPR011006 CheY-like superfamily VV1_0693 b75ce06394affe2f39a71a000e14285b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.4E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VV1_0693 b75ce06394affe2f39a71a000e14285b 95 Gene3D G3DSA:3.30.160.100 1 95 3.6E-38 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VV1_0693 b75ce06394affe2f39a71a000e14285b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 5.2E-33 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VV1_0693 b75ce06394affe2f39a71a000e14285b 95 SUPERFAMILY SSF69754 1 95 1.29E-34 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VV1_2136 014fdb82d3532240dad03560edd86b49 197 PIRSF PIRSF028788 1 197 1.2E-50 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VV1_2136 014fdb82d3532240dad03560edd86b49 197 SUPERFAMILY SSF159894 5 103 1.54E-30 T 14-10-2018 VV1_2136 014fdb82d3532240dad03560edd86b49 197 Pfam PF04994 TfoX C-terminal domain 115 194 1.0E-31 T 14-10-2018 IPR007077 TfoX, C-terminal VV1_2136 014fdb82d3532240dad03560edd86b49 197 Pfam PF04993 TfoX N-terminal domain 12 103 5.6E-30 T 14-10-2018 IPR007076 TfoX, N-terminal VV1_2136 014fdb82d3532240dad03560edd86b49 197 Gene3D G3DSA:3.30.1460.30 1 104 5.0E-36 T 14-10-2018 VV1_2136 014fdb82d3532240dad03560edd86b49 197 Gene3D G3DSA:1.10.150.20 114 196 1.2E-23 T 14-10-2018 VV2_1541 197e754c06e31e7a1c03ca9a531f7376 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 6.3E-43 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 VV2_1541 197e754c06e31e7a1c03ca9a531f7376 317 Pfam PF04463 Protein of unknown function (DUF523) 8 149 1.3E-37 T 14-10-2018 IPR007553 Domain of unknown function DUF523 VV2_1541 197e754c06e31e7a1c03ca9a531f7376 317 PIRSF PIRSF037004 1 317 2.8E-140 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VV1_1717 550629162594135fc3b308e52e639d03 133 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 129 4.0E-5 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1717 550629162594135fc3b308e52e639d03 133 PIRSF PIRSF029225 2 133 8.8E-49 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1717 550629162594135fc3b308e52e639d03 133 Gene3D G3DSA:3.40.50.10220 35 133 8.4E-27 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1717 550629162594135fc3b308e52e639d03 133 SUPERFAMILY SSF102220 30 133 4.45E-31 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1717 550629162594135fc3b308e52e639d03 133 Pfam PF03603 DNA polymerase III psi subunit 3 130 1.1E-36 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0376 04f9bda5128b90ae95d67918969580c2 501 Pfam PF03432 Relaxase/Mobilisation nuclease domain 75 191 2.5E-16 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 VV2_0427 c05867bb0746efdaf659da86e91b0b7a 96 Gene3D G3DSA:2.60.200.60 54 95 2.4E-12 T 14-10-2018 VV2_0427 c05867bb0746efdaf659da86e91b0b7a 96 Gene3D G3DSA:2.60.200.60 1 53 3.8E-10 T 14-10-2018 VV2_0427 c05867bb0746efdaf659da86e91b0b7a 96 Pfam PF05488 PAAR motif 18 85 3.9E-25 T 14-10-2018 IPR008727 PAAR motif VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 Pfam PF00209 Sodium:neurotransmitter symporter family 151 449 2.9E-32 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 Pfam PF00209 Sodium:neurotransmitter symporter family 11 121 1.7E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 35 49 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 SUPERFAMILY SSF161070 11 459 4.18E-129 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 92 118 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 316 336 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 19 40 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2869 7d3bdf16a2e0f56f0bc19aec300c4e91 477 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 48 67 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2207 88675f0fba13c1a33b2c0a96e17add49 177 SUPERFAMILY SSF69118 18 173 4.8E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VV1_2207 88675f0fba13c1a33b2c0a96e17add49 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 55 103 8.4E-14 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV1_2207 88675f0fba13c1a33b2c0a96e17add49 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 115 5.8E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV1_2207 88675f0fba13c1a33b2c0a96e17add49 177 Gene3D G3DSA:1.20.1290.10 11 174 2.6E-39 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VV1_0133 834534e25c93b8dbe1c7ef9c66b18b9a 221 SUPERFAMILY SSF52540 9 219 1.21E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0133 834534e25c93b8dbe1c7ef9c66b18b9a 221 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 1 219 1.3E-81 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 VV1_0133 834534e25c93b8dbe1c7ef9c66b18b9a 221 Gene3D G3DSA:3.40.50.300 1 211 5.5E-48 T 14-10-2018 VV1_1024 6833124989ef435fe251fbee0d93c1cb 246 SUPERFAMILY SSF161098 41 227 3.66E-46 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1024 6833124989ef435fe251fbee0d93c1cb 246 Gene3D G3DSA:1.10.3720.10 33 242 3.1E-55 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1024 6833124989ef435fe251fbee0d93c1cb 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 240 3.4E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1024 6833124989ef435fe251fbee0d93c1cb 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 1.6E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV2_0300 4814b8e750a8a3d057476c70df454d2e 203 Gene3D G3DSA:3.40.50.300 1 196 9.9E-15 T 14-10-2018 VV2_0300 4814b8e750a8a3d057476c70df454d2e 203 SUPERFAMILY SSF52540 2 180 1.35E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0129 8e801ccaee9518020cd8e56de189753b 314 Gene3D G3DSA:1.10.10.10 5 91 1.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0129 8e801ccaee9518020cd8e56de189753b 314 Gene3D G3DSA:3.40.190.10 94 293 2.4E-59 T 14-10-2018 VV1_0129 8e801ccaee9518020cd8e56de189753b 314 Pfam PF03466 LysR substrate binding domain 90 295 2.0E-43 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0129 8e801ccaee9518020cd8e56de189753b 314 Gene3D G3DSA:3.40.190.10 165 267 2.4E-59 T 14-10-2018 VV1_0129 8e801ccaee9518020cd8e56de189753b 314 SUPERFAMILY SSF53850 90 298 1.36E-46 T 14-10-2018 VV1_0129 8e801ccaee9518020cd8e56de189753b 314 SUPERFAMILY SSF46785 8 90 4.63E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0129 8e801ccaee9518020cd8e56de189753b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_1793 e86b17762decb948d712d71fe06bc8d9 325 Gene3D G3DSA:1.50.10.150 5 315 3.3E-45 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily VV1_1793 e86b17762decb948d712d71fe06bc8d9 325 Pfam PF03595 Voltage-dependent anion channel 19 306 2.6E-30 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VV2_1251 cc55ec151e442eac3097413e96ffe11f 726 SUPERFAMILY SSF51445 165 718 1.05E-149 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1251 cc55ec151e442eac3097413e96ffe11f 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 1.7E-192 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VV2_1251 cc55ec151e442eac3097413e96ffe11f 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 8.0E-127 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VV1_1841 eaf32f704f396043b794b0c410d353cd 528 Pfam PF03806 AbgT putative transporter family 19 526 2.0E-228 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VV1_1102 1aaea2776103e0accacd0a72e97afa56 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV1_1102 1aaea2776103e0accacd0a72e97afa56 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV1_1102 1aaea2776103e0accacd0a72e97afa56 203 Gene3D G3DSA:3.20.20.70 1 203 7.4E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1102 1aaea2776103e0accacd0a72e97afa56 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 6.1E-83 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV1_1102 1aaea2776103e0accacd0a72e97afa56 203 SUPERFAMILY SSF51569 3 201 1.15E-66 T 14-10-2018 VV1_1102 1aaea2776103e0accacd0a72e97afa56 203 Pfam PF01081 KDPG and KHG aldolase 5 197 4.7E-73 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VV1_0729 aa7a96f38ae7f330070e607e506ea72a 187 SUPERFAMILY SSF51206 17 137 8.9E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_0729 aa7a96f38ae7f330070e607e506ea72a 187 Gene3D G3DSA:2.60.120.10 3 139 3.0E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_0631 f100d80c80d5c49fc6481065a03135e3 98 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 5 97 2.8E-36 T 14-10-2018 IPR008873 TraA GO:0000746|GO:0005576 VV1_1453 7ccd05c382c95ed438f1ed12e6df2556 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.4E-173 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VV1_1453 7ccd05c382c95ed438f1ed12e6df2556 489 Gene3D G3DSA:3.40.1260.20 403 488 3.2E-6 T 14-10-2018 VV1_1453 7ccd05c382c95ed438f1ed12e6df2556 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.6E-104 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VV1_1453 7ccd05c382c95ed438f1ed12e6df2556 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1453 7ccd05c382c95ed438f1ed12e6df2556 489 SMART SM00316 37 122 5.8E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_1453 7ccd05c382c95ed438f1ed12e6df2556 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 VV1_1453 7ccd05c382c95ed438f1ed12e6df2556 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 14-10-2018 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 Gene3D G3DSA:1.10.10.10 12 98 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 Gene3D G3DSA:3.40.190.10 168 279 2.0E-47 T 14-10-2018 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 SUPERFAMILY SSF46785 15 118 4.7E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 7.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 SUPERFAMILY SSF53850 96 309 2.17E-33 T 14-10-2018 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 Gene3D G3DSA:3.40.190.10 108 305 2.0E-47 T 14-10-2018 VV2_1049 df94880696a86d4a87fd09c95bbc88d7 311 Pfam PF03466 LysR substrate binding domain 96 308 1.1E-33 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0458 522640f57c5e144b83a1b2f8b81cc598 292 Pfam PF03466 LysR substrate binding domain 111 285 4.6E-15 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_0458 522640f57c5e144b83a1b2f8b81cc598 292 SUPERFAMILY SSF53850 96 289 3.26E-23 T 14-10-2018 VV2_0458 522640f57c5e144b83a1b2f8b81cc598 292 Gene3D G3DSA:1.10.10.10 1 87 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0458 522640f57c5e144b83a1b2f8b81cc598 292 SUPERFAMILY SSF46785 1 85 1.77E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0458 522640f57c5e144b83a1b2f8b81cc598 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_0458 522640f57c5e144b83a1b2f8b81cc598 292 Gene3D G3DSA:3.40.190.290 92 284 8.4E-35 T 14-10-2018 VV2_1534 67c15cda9772fe324cd2e25e0b954fad 182 Gene3D G3DSA:1.10.1760.20 1 177 1.1E-19 T 14-10-2018 VV2_1534 67c15cda9772fe324cd2e25e0b954fad 182 Hamap MF_01572 UPF0397 protein . 1 182 21.039 T 14-10-2018 IPR022914 Protein of unknown function UPF0397 VV2_1534 67c15cda9772fe324cd2e25e0b954fad 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 5.1E-44 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 VV2_1192 27ffd22c0ec6a83ab3f207e1c708e745 367 Gene3D G3DSA:3.30.565.10 225 358 1.3E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1192 27ffd22c0ec6a83ab3f207e1c708e745 367 Pfam PF06580 Histidine kinase 170 248 1.9E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VV2_1192 27ffd22c0ec6a83ab3f207e1c708e745 367 SUPERFAMILY SSF55874 229 357 2.75E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_1192 27ffd22c0ec6a83ab3f207e1c708e745 367 SMART SM00387 263 360 1.5E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0253 6d4c5a8fcfe1212d3e0772364de92224 78 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.4E-35 T 14-10-2018 IPR021811 Protein of unknown function DUF3389 VV2_0933 25d0539f8a2d42940bd0ffbcdf24798a 179 Pfam PF01161 Phosphatidylethanolamine-binding protein 46 177 5.4E-36 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VV2_0933 25d0539f8a2d42940bd0ffbcdf24798a 179 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 45 177 5.7E-38 T 14-10-2018 IPR005247 YbhB/YbcL VV2_0933 25d0539f8a2d42940bd0ffbcdf24798a 179 Gene3D G3DSA:3.90.280.10 11 179 9.4E-53 T 14-10-2018 IPR036610 PEBP-like superfamily VV2_0933 25d0539f8a2d42940bd0ffbcdf24798a 179 SUPERFAMILY SSF49777 24 179 3.01E-49 T 14-10-2018 IPR036610 PEBP-like superfamily VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 2.6E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 2.6E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 2.6E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 2.6E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 2.6E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 2.6E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 1.0E-161 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 Pfam PF01235 Sodium:alanine symporter family 48 452 1.4E-161 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0536 0d1b591c78c8bc359cf5d1e942e8b00d 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VV1_0065 07f8205203a4468c3782765b5db543cb 171 Gene3D G3DSA:1.10.10.10 4 86 1.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0065 07f8205203a4468c3782765b5db543cb 171 Pfam PF03551 Transcriptional regulator PadR-like family 14 80 3.5E-12 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal VV1_0065 07f8205203a4468c3782765b5db543cb 171 SUPERFAMILY SSF46785 6 163 1.76E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0645 5417a35a1e015a3cb251894757a16cbb 581 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 11 579 2.1E-217 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VV2_0645 5417a35a1e015a3cb251894757a16cbb 581 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 303 538 4.8E-70 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VV1_0193 d30b5e63466b9387ab959d99e70fe8c6 92 Pfam PF10262 Rdx family 5 78 2.2E-33 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type VV1_0193 d30b5e63466b9387ab959d99e70fe8c6 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 7.3E-24 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type VV1_0193 d30b5e63466b9387ab959d99e70fe8c6 92 SUPERFAMILY SSF52833 4 87 3.35E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_0193 d30b5e63466b9387ab959d99e70fe8c6 92 Gene3D G3DSA:3.40.30.10 2 92 6.8E-42 T 14-10-2018 VV2_1385 d02d8f80df75f5795546c74aafd7768e 366 Pfam PF13265 Protein of unknown function (DUF4056) 22 285 9.3E-122 T 14-10-2018 IPR025130 Protein of unknown function DUF4056 VV2_0937 197e5ca0327a10713aa62130ca7b10a4 401 SUPERFAMILY SSF103473 11 396 1.83E-35 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0937 197e5ca0327a10713aa62130ca7b10a4 401 Pfam PF07690 Major Facilitator Superfamily 246 394 1.9E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0937 197e5ca0327a10713aa62130ca7b10a4 401 Pfam PF07690 Major Facilitator Superfamily 14 240 1.3E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0937 197e5ca0327a10713aa62130ca7b10a4 401 Gene3D G3DSA:1.20.1250.20 1 392 3.4E-26 T 14-10-2018 VV1_1244 6b5eb49ef223c26e7da3ca64bf90f315 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 3.7E-35 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted VV1_1244 6b5eb49ef223c26e7da3ca64bf90f315 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.4E-34 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted VV2_1232 94079c864c1259cb1465db1979800c8f 393 Pfam PF08238 Sel1 repeat 139 170 5.9 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1232 94079c864c1259cb1465db1979800c8f 393 Pfam PF08238 Sel1 repeat 80 97 0.49 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1232 94079c864c1259cb1465db1979800c8f 393 Pfam PF08238 Sel1 repeat 209 242 1.0E-5 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1232 94079c864c1259cb1465db1979800c8f 393 Pfam PF08238 Sel1 repeat 172 206 4.7E-4 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1232 94079c864c1259cb1465db1979800c8f 393 SUPERFAMILY SSF81901 79 283 7.24E-30 T 14-10-2018 VV2_1232 94079c864c1259cb1465db1979800c8f 393 SMART SM00671 207 242 4.1E-5 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1232 94079c864c1259cb1465db1979800c8f 393 SMART SM00671 171 206 0.0043 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1232 94079c864c1259cb1465db1979800c8f 393 SMART SM00671 135 170 0.075 T 14-10-2018 IPR006597 Sel1-like repeat VV2_1232 94079c864c1259cb1465db1979800c8f 393 Gene3D G3DSA:1.25.40.10 59 289 4.1E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1921 d9690103e013d76576729b65bd814a1e 158 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.3E-54 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 VV2_0579 40dcd8c3a2c3c714c12f2cdf20541d79 163 Pfam PF00578 AhpC/TSA family 38 144 1.6E-13 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV2_0579 40dcd8c3a2c3c714c12f2cdf20541d79 163 Gene3D G3DSA:3.40.30.10 28 154 5.6E-24 T 14-10-2018 VV2_0579 40dcd8c3a2c3c714c12f2cdf20541d79 163 PRINTS PR00421 Thioredoxin family signature 69 78 2.0E-5 T 14-10-2018 VV2_0579 40dcd8c3a2c3c714c12f2cdf20541d79 163 PRINTS PR00421 Thioredoxin family signature 128 139 2.0E-5 T 14-10-2018 VV2_0579 40dcd8c3a2c3c714c12f2cdf20541d79 163 PRINTS PR00421 Thioredoxin family signature 61 69 2.0E-5 T 14-10-2018 VV2_0579 40dcd8c3a2c3c714c12f2cdf20541d79 163 SUPERFAMILY SSF52833 6 152 1.02E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0579 40dcd8c3a2c3c714c12f2cdf20541d79 163 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV1_0238 182b6039fe463816323b563e4666f9dc 373 Pfam PF13609 Gram-negative porin 10 342 1.2E-33 T 14-10-2018 VV1_0238 182b6039fe463816323b563e4666f9dc 373 Gene3D G3DSA:2.40.160.10 44 373 2.3E-42 T 14-10-2018 IPR023614 Porin domain superfamily VV1_0238 182b6039fe463816323b563e4666f9dc 373 SUPERFAMILY SSF56935 44 373 2.11E-40 T 14-10-2018 VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 ProSitePatterns PS00213 Lipocalin signature. 28 41 - T 14-10-2018 IPR022272 Lipocalin family conserved site VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 SUPERFAMILY SSF50814 4 170 4.36E-53 T 14-10-2018 IPR012674 Calycin VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 PIRSF PIRSF036893 1 171 3.0E-45 T 14-10-2018 IPR022271 Lipocalin, ApoD type VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 PRINTS PR01171 Bacterial lipocalin signature 29 43 2.2E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 PRINTS PR01171 Bacterial lipocalin signature 99 113 2.2E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 PRINTS PR01171 Bacterial lipocalin signature 159 169 2.2E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 PRINTS PR01171 Bacterial lipocalin signature 46 62 2.2E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 PRINTS PR01171 Bacterial lipocalin signature 132 143 2.2E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 PRINTS PR01171 Bacterial lipocalin signature 65 74 2.2E-35 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 Pfam PF08212 Lipocalin-like domain 30 170 6.9E-42 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VV2_1500 66e2c247c37fbe4a277e86c87c778bff 171 Gene3D G3DSA:2.40.128.20 8 171 5.5E-53 T 14-10-2018 IPR012674 Calycin VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 Gene3D G3DSA:1.10.287.950 296 628 3.4E-73 T 14-10-2018 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 SMART SM00283 365 626 4.6E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 SMART SM00304 296 350 1.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 Gene3D G3DSA:3.30.450.20 65 167 2.1E-10 T 14-10-2018 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 SUPERFAMILY SSF58104 318 627 3.27E-76 T 14-10-2018 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 Pfam PF02743 Cache domain 41 258 4.9E-21 T 14-10-2018 IPR033479 Double Cache domain 1 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 Pfam PF00672 HAMP domain 299 347 5.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 593 5.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 5.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV2_0402 aebbde1c3c175b264f1c8ca8ab6993e8 628 Gene3D G3DSA:3.30.450.20 168 273 7.1E-11 T 14-10-2018 VV1_2860 2ff04e1986435b7d5ad9388925894db2 566 SUPERFAMILY SSF161098 298 537 4.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2860 2ff04e1986435b7d5ad9388925894db2 566 Gene3D G3DSA:1.10.3720.10 297 546 6.5E-16 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2860 2ff04e1986435b7d5ad9388925894db2 566 Gene3D G3DSA:1.10.3720.10 3 279 1.3E-16 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2860 2ff04e1986435b7d5ad9388925894db2 566 SUPERFAMILY SSF161098 5 274 4.32E-21 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0283 b63caee03d88d0dcbb320424b93f612e 140 Pfam PF12375 Phage protein 55 122 1.4E-19 T 14-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 251 3.7E-82 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 Gene3D G3DSA:3.40.190.10 114 210 4.0E-72 T 14-10-2018 VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 Gene3D G3DSA:3.40.190.10 32 251 4.0E-72 T 14-10-2018 VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 SMART SM00062 28 254 1.0E-69 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 SUPERFAMILY SSF53850 3 255 3.58E-71 T 14-10-2018 VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 252 4.1E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2102 304c82300e080ea3e0b4aab4289161ee 258 SMART SM00079 28 253 1.6E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VV1_0944 6ed1d2cd01c86f7f6b4c25c4708c420d 304 SUPERFAMILY SSF103481 50 146 4.45E-13 T 14-10-2018 VV1_0944 6ed1d2cd01c86f7f6b4c25c4708c420d 304 Pfam PF00892 EamA-like transporter family 155 287 3.7E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0944 6ed1d2cd01c86f7f6b4c25c4708c420d 304 Pfam PF00892 EamA-like transporter family 12 145 8.8E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0944 6ed1d2cd01c86f7f6b4c25c4708c420d 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 6.4E-87 T 14-10-2018 IPR004626 RarD protein GO:0005887 VV1_0944 6ed1d2cd01c86f7f6b4c25c4708c420d 304 SUPERFAMILY SSF103481 190 291 1.96E-8 T 14-10-2018 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 Gene3D G3DSA:1.20.1530.20 4 386 2.0E-83 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.1E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 Pfam PF00999 Sodium/hydrogen exchanger family 12 372 4.6E-66 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 SUPERFAMILY SSF51735 401 529 1.31E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 Pfam PF02254 TrkA-N domain 402 512 8.7E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 4.1E-82 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.856 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VV1_1325 22c1db40594f02e0ab40ce9c6e74be25 600 Gene3D G3DSA:3.40.50.720 399 560 5.0E-36 T 14-10-2018 VV2_0503 0e57e86884458783f2926ca13088b68e 70 SMART SM00357 6 70 6.4E-32 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 VV2_0503 0e57e86884458783f2926ca13088b68e 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.8E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0503 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 28 37 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0503 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 7 22 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0503 0e57e86884458783f2926ca13088b68e 70 PRINTS PR00050 Cold shock protein signature 43 61 3.1E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VV2_0503 0e57e86884458783f2926ca13088b68e 70 PIRSF PIRSF002599 1 70 4.6E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 VV2_0503 0e57e86884458783f2926ca13088b68e 70 Gene3D G3DSA:2.40.50.140 2 70 6.4E-31 T 14-10-2018 VV2_0503 0e57e86884458783f2926ca13088b68e 70 SUPERFAMILY SSF50249 3 69 4.07E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2867 1b1be31aa22f7747172f00729ef0ad39 231 Gene3D G3DSA:3.30.2350.10 1 196 6.1E-46 T 14-10-2018 VV1_2867 1b1be31aa22f7747172f00729ef0ad39 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_2867 1b1be31aa22f7747172f00729ef0ad39 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.3E-104 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like VV1_2867 1b1be31aa22f7747172f00729ef0ad39 231 SUPERFAMILY SSF55120 2 197 1.02E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_2867 1b1be31aa22f7747172f00729ef0ad39 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 3.6E-24 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_2269 aa1cc042d127bbbd68a6d525c68f94fe 341 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 341 36.603 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 VV1_2269 aa1cc042d127bbbd68a6d525c68f94fe 341 Pfam PF05128 Domain of unknown function (DUF697) 176 334 3.2E-52 T 14-10-2018 IPR021147 Protein of unknown function DUF697 VV1_2269 aa1cc042d127bbbd68a6d525c68f94fe 341 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 61 334 1.7E-80 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 VV1_0647 72f69bb411a8c2f428c4932f93542669 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.0E-62 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VV1_0647 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 79 162 6.47E-27 T 14-10-2018 VV1_0647 72f69bb411a8c2f428c4932f93542669 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.9E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VV1_0647 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.260 1 78 8.1E-33 T 14-10-2018 VV1_0647 72f69bb411a8c2f428c4932f93542669 164 Gene3D G3DSA:3.30.70.1150 80 157 4.6E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VV1_0647 72f69bb411a8c2f428c4932f93542669 164 Pfam PF01842 ACT domain 3 68 1.8E-16 T 14-10-2018 IPR002912 ACT domain VV1_0647 72f69bb411a8c2f428c4932f93542669 164 SUPERFAMILY SSF55021 2 75 9.41E-23 T 14-10-2018 VV1_0647 72f69bb411a8c2f428c4932f93542669 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 8.0E-38 T 14-10-2018 VV2_1403 23f8c31d533f4f648176425d6f65e746 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 348 4.3E-47 T 14-10-2018 IPR000160 GGDEF domain VV2_1403 23f8c31d533f4f648176425d6f65e746 357 SUPERFAMILY SSF55073 196 351 1.8E-49 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1403 23f8c31d533f4f648176425d6f65e746 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 351 4.9E-50 T 14-10-2018 IPR000160 GGDEF domain VV2_1403 23f8c31d533f4f648176425d6f65e746 357 Pfam PF13185 GAF domain 44 174 1.3E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_1403 23f8c31d533f4f648176425d6f65e746 357 Gene3D G3DSA:3.30.450.40 33 187 1.3E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_1403 23f8c31d533f4f648176425d6f65e746 357 SUPERFAMILY SSF55781 36 185 2.4E-20 T 14-10-2018 VV2_1403 23f8c31d533f4f648176425d6f65e746 357 SMART SM00267 181 352 6.8E-60 T 14-10-2018 IPR000160 GGDEF domain VV2_1403 23f8c31d533f4f648176425d6f65e746 357 Gene3D G3DSA:3.30.70.270 188 354 3.7E-56 T 14-10-2018 VV2_1403 23f8c31d533f4f648176425d6f65e746 357 SMART SM00065 44 188 1.8E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 Gene3D G3DSA:1.10.540.10 2 127 1.2E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.4E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 Gene3D G3DSA:2.40.110.10 128 240 9.8E-43 T 14-10-2018 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 SUPERFAMILY SSF47203 234 387 2.09E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 PIRSF PIRSF016578 135 389 2.6E-13 T 14-10-2018 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 PIRSF PIRSF016578 16 103 8.4E-4 T 14-10-2018 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 Gene3D G3DSA:1.20.140.10 241 385 1.0E-48 T 14-10-2018 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 125 2.1E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 SUPERFAMILY SSF56645 6 249 6.15E-82 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VV2_0496 a7804fdba3cd663d42f9e2fd542eda87 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.6E-44 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VV1_0903 179f41c87fd332cff2ad2e204dc624ca 256 Pfam PF01026 TatD related DNase 2 252 1.5E-68 T 14-10-2018 IPR001130 TatD family GO:0016788 VV1_0903 179f41c87fd332cff2ad2e204dc624ca 256 SUPERFAMILY SSF51556 1 252 2.77E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_0903 179f41c87fd332cff2ad2e204dc624ca 256 Gene3D G3DSA:3.20.20.140 1 255 1.8E-81 T 14-10-2018 VV1_0903 179f41c87fd332cff2ad2e204dc624ca 256 PIRSF PIRSF005902 1 256 1.9E-72 T 14-10-2018 IPR001130 TatD family GO:0016788 VV1_0903 179f41c87fd332cff2ad2e204dc624ca 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 253 2.0E-73 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VV2_1175 dea86cc869dd53624ae0aec222f89977 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 2.8E-144 T 14-10-2018 IPR021781 Protein of unknown function DUF3346 VV1_2652 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 Pfam PF14539 Domain of unknown function (DUF4442) 18 127 6.1E-10 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 VV1_2652 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 Gene3D G3DSA:3.10.129.10 4 155 4.3E-26 T 14-10-2018 VV1_2652 a9e0863a58ac53cdfc4aa7a5ff349c8f 161 SUPERFAMILY SSF54637 12 156 1.49E-15 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_1456 eae6bf91e6b6a46ce42d5dfef730f1de 481 PIRSF PIRSF004919 15 481 1.8E-141 T 14-10-2018 IPR025502 TldD VV1_1456 eae6bf91e6b6a46ce42d5dfef730f1de 481 Gene3D G3DSA:3.30.2290.10 14 240 2.6E-13 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VV1_1456 eae6bf91e6b6a46ce42d5dfef730f1de 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 9.7E-65 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VV1_1456 eae6bf91e6b6a46ce42d5dfef730f1de 481 SUPERFAMILY SSF111283 18 480 4.45E-127 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VV1_2086 b58bd54f97a353857745b4ea984df0d2 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 327 2.1E-91 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VV1_2086 b58bd54f97a353857745b4ea984df0d2 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.286 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VV1_2086 b58bd54f97a353857745b4ea984df0d2 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 1.1E-110 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VV1_2086 b58bd54f97a353857745b4ea984df0d2 335 SUPERFAMILY SSF52540 50 198 6.9E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2905 c29beed572cc2ee20bf48d3e5f332c3d 276 SUPERFAMILY SSF51735 2 269 1.98E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2905 c29beed572cc2ee20bf48d3e5f332c3d 276 Gene3D G3DSA:3.40.50.720 1 276 3.0E-42 T 14-10-2018 VV1_2905 c29beed572cc2ee20bf48d3e5f332c3d 276 Pfam PF13460 NAD(P)H-binding 9 182 8.0E-12 T 14-10-2018 IPR016040 NAD(P)-binding domain VV1_0042 135a2b947056f07599f58df95eff91fa 418 Pfam PF01494 FAD binding domain 6 164 2.2E-19 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 VV1_0042 135a2b947056f07599f58df95eff91fa 418 SUPERFAMILY SSF51905 4 380 1.7E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0042 135a2b947056f07599f58df95eff91fa 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.0E-7 T 14-10-2018 VV1_0042 135a2b947056f07599f58df95eff91fa 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.0E-7 T 14-10-2018 VV1_0042 135a2b947056f07599f58df95eff91fa 418 Gene3D G3DSA:3.50.50.60 2 417 9.0E-127 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0071 fe6ee8221434872fb1a12ede7a5f60e5 314 PIRSF PIRSF006230 2 280 3.0E-105 T 14-10-2018 IPR016478 GTPase, MTG1 VV2_0071 fe6ee8221434872fb1a12ede7a5f60e5 314 Gene3D G3DSA:3.40.50.300 6 174 7.7E-44 T 14-10-2018 VV2_0071 fe6ee8221434872fb1a12ede7a5f60e5 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 3.7E-108 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VV2_0071 fe6ee8221434872fb1a12ede7a5f60e5 314 Pfam PF01926 50S ribosome-binding GTPase 120 186 1.1E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 VV2_0071 fe6ee8221434872fb1a12ede7a5f60e5 314 Gene3D G3DSA:1.10.1580.10 177 268 2.6E-30 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VV2_0071 fe6ee8221434872fb1a12ede7a5f60e5 314 SUPERFAMILY SSF52540 12 186 9.14E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0365 f4dace71fe7f655c53028135a8936df6 183 PRINTS PR00773 GrpE protein signature 67 83 1.2E-16 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 PRINTS PR00773 GrpE protein signature 95 110 1.2E-16 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 PRINTS PR00773 GrpE protein signature 150 165 1.2E-16 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 Pfam PF01025 GrpE 36 180 6.8E-44 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 Hamap MF_01151 Protein GrpE [grpE]. 2 183 15.303 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 SUPERFAMILY SSF51064 143 180 7.85E-9 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 Gene3D G3DSA:3.90.20.20 35 141 5.9E-33 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 SUPERFAMILY SSF58014 44 142 5.1E-30 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VV1_0365 f4dace71fe7f655c53028135a8936df6 183 Gene3D G3DSA:2.30.22.10 142 182 3.3E-12 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 SUPERFAMILY SSF141868 343 590 5.62E-87 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 SUPERFAMILY SSF55073 172 330 1.88E-34 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 Pfam PF00563 EAL domain 344 578 1.4E-68 T 14-10-2018 IPR001633 EAL domain VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 Gene3D G3DSA:3.20.20.450 342 590 2.2E-94 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 323 5.4E-33 T 14-10-2018 IPR000160 GGDEF domain VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 SMART SM00052 338 583 4.6E-104 T 14-10-2018 IPR001633 EAL domain VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 SMART SM00267 154 328 1.6E-38 T 14-10-2018 IPR000160 GGDEF domain VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 Gene3D G3DSA:3.30.70.270 162 341 2.0E-39 T 14-10-2018 VV2_0581 4b5fd66fa62a78446d7f207d6f573f26 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 326 2.9E-27 T 14-10-2018 IPR000160 GGDEF domain VV2_1283 40bc59e2689bdfba99126c628546fa22 414 Pfam PF13416 Bacterial extracellular solute-binding protein 45 345 1.8E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV2_1283 40bc59e2689bdfba99126c628546fa22 414 Gene3D G3DSA:3.40.190.10 137 400 1.1E-73 T 14-10-2018 VV2_1283 40bc59e2689bdfba99126c628546fa22 414 Gene3D G3DSA:3.40.190.10 49 339 1.1E-73 T 14-10-2018 VV2_1283 40bc59e2689bdfba99126c628546fa22 414 SUPERFAMILY SSF53850 23 409 1.04E-61 T 14-10-2018 VV1_1153 315db0fadeb7a94d91df6791d4181ff5 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 16 196 1.2E-61 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VV1_1153 315db0fadeb7a94d91df6791d4181ff5 197 Pfam PF03602 Conserved hypothetical protein 95 19 195 9.5E-63 T 14-10-2018 VV1_1153 315db0fadeb7a94d91df6791d4181ff5 197 SUPERFAMILY SSF53335 19 195 5.08E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1153 315db0fadeb7a94d91df6791d4181ff5 197 Gene3D G3DSA:3.40.50.150 6 197 5.3E-65 T 14-10-2018 VV1_1153 315db0fadeb7a94d91df6791d4181ff5 197 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VV1_1153 315db0fadeb7a94d91df6791d4181ff5 197 PIRSF PIRSF004553 18 197 5.8E-56 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VV1_2274 09acd2ec9be305fe48be8eae3224977e 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 5.7E-49 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV1_2274 09acd2ec9be305fe48be8eae3224977e 472 PIRSF PIRSF002457 1 472 9.5E-116 T 14-10-2018 IPR030676 Citrate carrier CitT-related VV1_2274 09acd2ec9be305fe48be8eae3224977e 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 5.3E-77 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 SMART SM00411 3 92 2.7E-40 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.6E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.6E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.6E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 95 29.664 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.0E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 93 1.1E-50 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 Gene3D G3DSA:4.10.520.10 1 95 9.6E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_2375 865e9819fcc2a4d125661095828c5df7 95 SUPERFAMILY SSF47729 3 93 3.53E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VV1_2115 49b505f18f01c20283357c8b76eefea5 207 Hamap MF_00789 UPF0319 protein YccT [yccT]. 1 205 24.411 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VV1_2115 49b505f18f01c20283357c8b76eefea5 207 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 26 202 3.2E-38 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:3.30.450.20 9 108 1.9E-5 T 14-10-2018 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF55874 177 338 1.44E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:3.30.565.10 190 343 2.6E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF13188 PAS domain 18 59 1.9E-6 T 14-10-2018 IPR000014 PAS domain VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 Gene3D G3DSA:1.10.287.130 109 185 1.2E-9 T 14-10-2018 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF47384 117 188 3.34E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 2.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 1.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 SMART SM00388 122 188 6.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 SMART SM00387 231 337 2.9E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 4.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1932 5fedfe8774dc4cd16f584f8c7f2def1b 344 SUPERFAMILY SSF55785 18 85 2.3E-7 T 14-10-2018 IPR035965 PAS domain superfamily VV2_1229 1d1b8ab07a0199d102bcca9016012745 926 Gene3D G3DSA:1.50.10.10 418 764 8.6E-44 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VV2_1229 1d1b8ab07a0199d102bcca9016012745 926 Pfam PF06202 Amylo-alpha-1,6-glucosidase 400 765 1.9E-118 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 VV2_1229 1d1b8ab07a0199d102bcca9016012745 926 SUPERFAMILY SSF48208 366 844 2.66E-67 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VV1_2848 135adfa404af1f0027c162b0e5334761 449 Gene3D G3DSA:1.10.287.130 191 298 3.1E-7 T 14-10-2018 VV1_2848 135adfa404af1f0027c162b0e5334761 449 SUPERFAMILY SSF55874 307 443 1.23E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2848 135adfa404af1f0027c162b0e5334761 449 Gene3D G3DSA:3.30.565.10 307 448 2.0E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2848 135adfa404af1f0027c162b0e5334761 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 1.5E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2848 135adfa404af1f0027c162b0e5334761 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2848 135adfa404af1f0027c162b0e5334761 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 1.2E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_2848 135adfa404af1f0027c162b0e5334761 449 SMART SM00387 340 447 4.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1347 b1aa9617d4e7c3a9359a5008310ffd9e 112 Pfam PF11333 Protein of unknown function (DUF3135) 9 89 3.6E-33 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 VV1_0027 0e4cfe45907344e02e4992b23cee3e22 652 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 67 224 1.7E-31 T 14-10-2018 IPR024618 Domain of unknown function DUF3857 VV1_0027 0e4cfe45907344e02e4992b23cee3e22 652 SUPERFAMILY SSF54001 279 393 2.29E-8 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VV1_0027 0e4cfe45907344e02e4992b23cee3e22 652 Gene3D G3DSA:3.10.620.30 268 413 3.7E-34 T 14-10-2018 VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 5.1E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 5.1E-116 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 Gene3D G3DSA:1.10.150.130 10 105 3.6E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 56.274 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 SUPERFAMILY SSF47823 11 107 2.55E-34 T 14-10-2018 VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 Gene3D G3DSA:1.10.443.10 118 299 2.2E-73 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 SUPERFAMILY SSF56349 113 303 2.21E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 61.19 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VV1_0530 fac8c9376ec0c93944d6526620750dbf 305 Pfam PF00589 Phage integrase family 120 291 8.7E-53 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_0690 6a0a6703d5e7520505fe5becdd0c16a1 164 Pfam PF03968 OstA-like protein 30 141 2.7E-31 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VV1_0690 6a0a6703d5e7520505fe5becdd0c16a1 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.0E-46 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VV1_0690 6a0a6703d5e7520505fe5becdd0c16a1 164 Gene3D G3DSA:2.60.450.10 20 157 1.4E-41 T 14-10-2018 VV1_0690 6a0a6703d5e7520505fe5becdd0c16a1 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.741 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VV1_2508 27b298214a1e86a6b227260606bc4952 135 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV1_2508 27b298214a1e86a6b227260606bc4952 135 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.1E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_2508 27b298214a1e86a6b227260606bc4952 135 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.1E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VV1_2508 27b298214a1e86a6b227260606bc4952 135 Pfam PF00293 NUDIX domain 10 115 4.3E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_2508 27b298214a1e86a6b227260606bc4952 135 SUPERFAMILY SSF55811 9 134 2.17E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_2508 27b298214a1e86a6b227260606bc4952 135 Gene3D G3DSA:3.90.79.10 3 132 8.8E-19 T 14-10-2018 VV2_0995 8cc5a6ca66a1badc9d1e583635ab1455 335 PIRSF PIRSF029594 1 329 6.3E-92 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 VV2_0995 8cc5a6ca66a1badc9d1e583635ab1455 335 Pfam PF11168 Protein of unknown function (DUF2955) 3 141 8.4E-48 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VV2_0995 8cc5a6ca66a1badc9d1e583635ab1455 335 Pfam PF13515 Fusaric acid resistance protein-like 181 310 3.6E-7 T 14-10-2018 VV1_0041 e14dea32a459e30bbb650e1a649ae97e 1005 ProSitePatterns PS00018 EF-hand calcium-binding domain. 245 257 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site VV1_0041 e14dea32a459e30bbb650e1a649ae97e 1005 PIRSF PIRSF036597 1 1002 0.0 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related VV1_0041 e14dea32a459e30bbb650e1a649ae97e 1005 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 148 433 2.5E-73 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VV1_0041 e14dea32a459e30bbb650e1a649ae97e 1005 SUPERFAMILY SSF55486 283 356 7.33E-5 T 14-10-2018 VV1_0041 e14dea32a459e30bbb650e1a649ae97e 1005 SUPERFAMILY SSF49299 779 877 3.92E-5 T 14-10-2018 IPR035986 PKD domain superfamily VV1_0041 e14dea32a459e30bbb650e1a649ae97e 1005 Gene3D G3DSA:2.60.40.10 790 872 3.3E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_0041 e14dea32a459e30bbb650e1a649ae97e 1005 Pfam PF05547 Immune inhibitor A peptidase M6 172 377 6.0E-12 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VV1_2833 12513114a3a37fedbffb17bc65387617 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.548 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV1_2833 12513114a3a37fedbffb17bc65387617 389 Gene3D G3DSA:1.20.1530.10 3 381 7.1E-148 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily VV1_2833 12513114a3a37fedbffb17bc65387617 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.5E-188 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV1_2833 12513114a3a37fedbffb17bc65387617 389 Pfam PF06965 Na+/H+ antiporter 1 7 373 3.5E-145 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VV1_0816 d8366e275af204cf744dad1b27904ed9 353 Gene3D G3DSA:3.40.50.2000 4 156 1.3E-24 T 14-10-2018 VV1_0816 d8366e275af204cf744dad1b27904ed9 353 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 303 4.3E-60 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VV1_0816 d8366e275af204cf744dad1b27904ed9 353 SUPERFAMILY SSF53756 10 342 7.06E-85 T 14-10-2018 VV1_0816 d8366e275af204cf744dad1b27904ed9 353 Gene3D G3DSA:3.40.50.2000 162 347 5.7E-42 T 14-10-2018 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 Hamap MF_00258 Glutamate racemase [murI]. 7 254 32.808 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 SUPERFAMILY SSF53681 111 260 4.91E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 Gene3D G3DSA:3.40.50.1860 11 231 6.9E-81 T 14-10-2018 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 Gene3D G3DSA:3.40.50.1860 99 208 6.9E-81 T 14-10-2018 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 1.2E-25 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 224 1.7E-68 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 SUPERFAMILY SSF53681 8 108 8.5E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV1_1175 9acf244688f0b2e943079fd29a95917e 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VV2_0907 866a4039f7a28b4874f630f84fc06fc0 894 Gene3D G3DSA:1.25.40.20 711 873 2.0E-29 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VV2_0907 866a4039f7a28b4874f630f84fc06fc0 894 SMART SM00248 749 778 0.0018 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VV2_0907 866a4039f7a28b4874f630f84fc06fc0 894 SMART SM00248 815 844 0.029 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VV2_0907 866a4039f7a28b4874f630f84fc06fc0 894 SMART SM00248 782 811 1.7 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 VV2_0907 866a4039f7a28b4874f630f84fc06fc0 894 SUPERFAMILY SSF48403 742 863 7.93E-27 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VV2_0907 866a4039f7a28b4874f630f84fc06fc0 894 Pfam PF12796 Ankyrin repeats (3 copies) 754 838 8.9E-14 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain VV2_1609 4694f259659e17352846b3cc3305f92c 261 SMART SM00382 31 220 3.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1609 4694f259659e17352846b3cc3305f92c 261 Pfam PF00005 ABC transporter 22 171 1.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1609 4694f259659e17352846b3cc3305f92c 261 SUPERFAMILY SSF52540 6 232 4.14E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1609 4694f259659e17352846b3cc3305f92c 261 Gene3D G3DSA:3.40.50.300 1 255 6.5E-59 T 14-10-2018 VV1_1342 a5078c72873e9648411e61631d21880a 336 Gene3D G3DSA:3.90.25.10 193 328 5.3E-141 T 14-10-2018 VV1_1342 a5078c72873e9648411e61631d21880a 336 Gene3D G3DSA:3.40.50.720 3 273 5.3E-141 T 14-10-2018 VV1_1342 a5078c72873e9648411e61631d21880a 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 3.2E-141 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VV1_1342 a5078c72873e9648411e61631d21880a 336 SUPERFAMILY SSF51735 1 335 4.08E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1342 a5078c72873e9648411e61631d21880a 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 3.3E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain VV1_1326 5c1c1e7a2b4c96d7c95a69b258b69cfa 68 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 55 6.6E-20 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VV1_1326 5c1c1e7a2b4c96d7c95a69b258b69cfa 68 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 62 4.8E-32 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VV1_1572 6a99f98a5df4b6d3c06d25675a841787 419 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 244 407 8.1E-35 T 14-10-2018 IPR000160 GGDEF domain VV1_1572 6a99f98a5df4b6d3c06d25675a841787 419 Gene3D G3DSA:1.20.1480.50 136 231 6.1E-8 T 14-10-2018 VV1_1572 6a99f98a5df4b6d3c06d25675a841787 419 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 404 8.2E-37 T 14-10-2018 IPR000160 GGDEF domain VV1_1572 6a99f98a5df4b6d3c06d25675a841787 419 SMART SM00267 230 409 9.2E-38 T 14-10-2018 IPR000160 GGDEF domain VV1_1572 6a99f98a5df4b6d3c06d25675a841787 419 SUPERFAMILY SSF55073 250 410 2.17E-38 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_1572 6a99f98a5df4b6d3c06d25675a841787 419 Gene3D G3DSA:3.30.70.270 241 418 7.3E-45 T 14-10-2018 VV1_0382 5fd711e9802e1978fd16a1c0c6227bf1 568 Gene3D G3DSA:3.40.50.300 1 363 2.7E-24 T 14-10-2018 VV1_0382 5fd711e9802e1978fd16a1c0c6227bf1 568 SUPERFAMILY SSF52540 1 341 1.27E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0382 5fd711e9802e1978fd16a1c0c6227bf1 568 Pfam PF13175 AAA ATPase domain 127 338 2.2E-16 T 14-10-2018 VV1_0382 5fd711e9802e1978fd16a1c0c6227bf1 568 Pfam PF13175 AAA ATPase domain 1 110 1.2E-18 T 14-10-2018 VV1_0236 6083089eeef136530243e810416b5bec 474 SUPERFAMILY SSF52374 3 301 3.22E-108 T 14-10-2018 VV1_0236 6083089eeef136530243e810416b5bec 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 3.5E-196 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VV1_0236 6083089eeef136530243e810416b5bec 474 Gene3D G3DSA:1.10.10.350 370 472 5.3E-25 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VV1_0236 6083089eeef136530243e810416b5bec 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0236 6083089eeef136530243e810416b5bec 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0236 6083089eeef136530243e810416b5bec 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0236 6083089eeef136530243e810416b5bec 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0236 6083089eeef136530243e810416b5bec 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.7E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_0236 6083089eeef136530243e810416b5bec 474 SUPERFAMILY SSF48163 302 464 2.49E-48 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VV1_0236 6083089eeef136530243e810416b5bec 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.334 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VV1_0236 6083089eeef136530243e810416b5bec 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_0236 6083089eeef136530243e810416b5bec 474 Gene3D G3DSA:3.40.50.620 2 317 3.1E-133 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0236 6083089eeef136530243e810416b5bec 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 2.9E-114 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VV1_0968 ebf121288ff29f451e1e03d4a0347c6e 136 SUPERFAMILY SSF46689 1 110 8.96E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0968 ebf121288ff29f451e1e03d4a0347c6e 136 Gene3D G3DSA:1.10.10.10 2 56 3.8E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0968 ebf121288ff29f451e1e03d4a0347c6e 136 Pfam PF13565 Homeodomain-like domain 29 106 1.7E-13 T 14-10-2018 VV2_0336 fb2431c164e06bc90bf3e9200f120f63 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.5E-52 T 14-10-2018 VV2_0336 fb2431c164e06bc90bf3e9200f120f63 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VV2_0336 fb2431c164e06bc90bf3e9200f120f63 155 Gene3D G3DSA:3.20.20.70 2 154 2.9E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0336 fb2431c164e06bc90bf3e9200f120f63 155 SUPERFAMILY SSF102114 23 117 2.35E-7 T 14-10-2018 VV2_0336 fb2431c164e06bc90bf3e9200f120f63 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 151 3.8E-61 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VV2_0336 fb2431c164e06bc90bf3e9200f120f63 155 PIRSF PIRSF000368 1 155 2.8E-59 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VV2_0837 75630f065e09ab439a4d470d855e83cd 271 Pfam PF04954 Siderophore-interacting protein 134 253 3.1E-34 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VV2_0837 75630f065e09ab439a4d470d855e83cd 271 SUPERFAMILY SSF63380 14 128 8.04E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VV2_0837 75630f065e09ab439a4d470d855e83cd 271 Gene3D G3DSA:2.40.30.10 4 127 1.2E-29 T 14-10-2018 VV2_0837 75630f065e09ab439a4d470d855e83cd 271 Gene3D G3DSA:3.40.50.80 131 270 1.4E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VV2_0837 75630f065e09ab439a4d470d855e83cd 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 127 4.9E-32 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 SUPERFAMILY SSF68923 11 228 4.19E-87 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 SUPERFAMILY SSF53795 230 541 3.14E-127 T 14-10-2018 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.90.228.20 236 526 5.1E-236 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 7.2E-212 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-274 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.967 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 PIRSF PIRSF006294 4 541 7.3E-228 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:2.170.8.10 49 351 5.1E-236 T 14-10-2018 VV1_0881 7087796ae5f5ea13fd07c6eb2a269c5a 542 Gene3D G3DSA:3.40.449.10 25 235 5.1E-236 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VV2_0368 1c2359c697c3e47f44ad1c5cb8c06afb 285 Gene3D G3DSA:1.20.1080.10 1 250 5.6E-66 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VV2_0368 1c2359c697c3e47f44ad1c5cb8c06afb 285 Pfam PF01226 Formate/nitrite transporter 8 257 3.7E-61 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VV1_1971 d56be8e6d31fd9adeeef7ea1ceac767d 438 Gene3D G3DSA:2.40.160.60 26 438 7.9E-123 T 14-10-2018 VV1_1971 d56be8e6d31fd9adeeef7ea1ceac767d 438 SUPERFAMILY SSF56935 26 438 2.32E-101 T 14-10-2018 VV1_1971 d56be8e6d31fd9adeeef7ea1ceac767d 438 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 438 5.5E-130 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 Gene3D G3DSA:3.30.450.20 268 406 5.2E-24 T 14-10-2018 VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 Gene3D G3DSA:3.30.70.270 407 579 8.3E-53 T 14-10-2018 VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 SMART SM00267 401 577 1.7E-68 T 14-10-2018 IPR000160 GGDEF domain VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 1.6E-13 T 14-10-2018 IPR000014 PAS domain VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 SUPERFAMILY SSF55785 169 261 8.72E-6 T 14-10-2018 IPR035965 PAS domain superfamily VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 Gene3D G3DSA:3.30.450.20 160 267 5.3E-7 T 14-10-2018 VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 SUPERFAMILY SSF55785 266 392 1.69E-19 T 14-10-2018 IPR035965 PAS domain superfamily VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 SUPERFAMILY SSF55073 417 576 1.49E-46 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 6.4E-49 T 14-10-2018 IPR000160 GGDEF domain VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 Pfam PF08448 PAS fold 285 395 5.7E-18 T 14-10-2018 IPR013656 PAS fold-4 VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 SMART SM00091 158 223 25.0 T 14-10-2018 IPR000014 PAS domain VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 SMART SM00091 38 101 200.0 T 14-10-2018 IPR000014 PAS domain VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 SMART SM00091 279 346 0.0026 T 14-10-2018 IPR000014 PAS domain VV1_0551 cb851af1e866946cc11f2c97c851cf3a 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 1.7E-49 T 14-10-2018 IPR000160 GGDEF domain VV1_2540 f66b18b6407fbb68b9a486fb5672f779 151 Pfam PF00583 Acetyltransferase (GNAT) family 36 133 9.9E-12 T 14-10-2018 IPR000182 GNAT domain VV1_2540 f66b18b6407fbb68b9a486fb5672f779 151 SUPERFAMILY SSF55729 4 141 4.03E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2540 f66b18b6407fbb68b9a486fb5672f779 151 Gene3D G3DSA:3.40.630.30 4 146 6.3E-22 T 14-10-2018 VV1_3252 9e2ecedd1237094b81e544c8bbcc277f 199 SMART SM00471 28 153 5.8E-4 T 14-10-2018 IPR003607 HD/PDEase domain VV1_3252 9e2ecedd1237094b81e544c8bbcc277f 199 SUPERFAMILY SSF109604 6 188 2.3E-30 T 14-10-2018 VV1_3252 9e2ecedd1237094b81e544c8bbcc277f 199 Pfam PF13023 HD domain 18 149 6.6E-9 T 14-10-2018 IPR006674 HD domain VV1_3252 9e2ecedd1237094b81e544c8bbcc277f 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 85 188 2.0E-33 T 14-10-2018 VV1_3252 9e2ecedd1237094b81e544c8bbcc277f 199 Gene3D G3DSA:1.10.3210.10 2 199 7.4E-69 T 14-10-2018 VV2_1005 d59caa9addf77d4cb04d57f49f5989c3 427 Pfam PF02687 FtsX-like permease family 322 420 1.1E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV2_1005 d59caa9addf77d4cb04d57f49f5989c3 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 1.2E-24 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VV2_1084 1105f333b3fa3e4b2051aac79c723250 215 SMART SM00934 5 206 3.4E-26 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV2_1084 1105f333b3fa3e4b2051aac79c723250 215 SUPERFAMILY SSF51366 1 214 6.28E-37 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV2_1084 1105f333b3fa3e4b2051aac79c723250 215 Gene3D G3DSA:3.20.20.70 1 215 5.6E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_1084 1105f333b3fa3e4b2051aac79c723250 215 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 203 7.4E-30 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VV1_2549 2e0cb7ebcbb51f92d975e6b57c2c8959 122 Gene3D G3DSA:3.10.180.10 1 122 1.0E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2549 2e0cb7ebcbb51f92d975e6b57c2c8959 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 1.1E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_2549 2e0cb7ebcbb51f92d975e6b57c2c8959 122 SUPERFAMILY SSF54593 3 121 6.6E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_0007 ea415a781cc53da8b62c32f630bac474 849 SUPERFAMILY SSF82689 750 849 1.44E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VV1_0007 ea415a781cc53da8b62c32f630bac474 849 Pfam PF00924 Mechanosensitive ion channel 639 838 8.3E-58 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV1_0007 ea415a781cc53da8b62c32f630bac474 849 SUPERFAMILY SSF50182 682 747 5.23E-18 T 14-10-2018 IPR010920 LSM domain superfamily VV1_0007 ea415a781cc53da8b62c32f630bac474 849 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 248 579 4.3E-38 T 14-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 VV1_0007 ea415a781cc53da8b62c32f630bac474 849 Gene3D G3DSA:2.30.30.60 697 746 1.5E-12 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VV1_0007 ea415a781cc53da8b62c32f630bac474 849 SUPERFAMILY SSF82861 597 680 5.89E-9 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VV1_0007 ea415a781cc53da8b62c32f630bac474 849 Gene3D G3DSA:3.30.70.100 750 843 2.5E-22 T 14-10-2018 VV1_0007 ea415a781cc53da8b62c32f630bac474 849 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 711 745 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VV1_0147 d1ea496c88574fc95edcad6bdfbc603f 76 Gene3D G3DSA:1.10.10.10 1 72 9.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0147 d1ea496c88574fc95edcad6bdfbc603f 76 SUPERFAMILY SSF46785 1 58 1.91E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0147 d1ea496c88574fc95edcad6bdfbc603f 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 2.7E-13 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VV1_0047 75fd86949244cd3f1120aa6b1948d8ea 86 Gene3D G3DSA:1.10.1200.10 4 85 1.2E-21 T 14-10-2018 IPR036736 ACP-like superfamily VV1_0047 75fd86949244cd3f1120aa6b1948d8ea 86 SUPERFAMILY SSF47336 5 85 5.23E-14 T 14-10-2018 IPR036736 ACP-like superfamily VV1_0047 75fd86949244cd3f1120aa6b1948d8ea 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 5.8E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VV2_0966 0c6d1e38085c0c8fe186f5c28d8eeee0 217 SUPERFAMILY SSF55469 1 216 3.66E-64 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VV2_0966 0c6d1e38085c0c8fe186f5c28d8eeee0 217 Gene3D G3DSA:3.40.109.10 2 217 4.7E-58 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VV2_0966 0c6d1e38085c0c8fe186f5c28d8eeee0 217 Pfam PF00881 Nitroreductase family 8 193 4.4E-28 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.6E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 Gene3D G3DSA:3.40.50.720 2 246 7.7E-72 T 14-10-2018 VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 Pfam PF00106 short chain dehydrogenase 13 208 7.5E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 SUPERFAMILY SSF51735 9 242 4.24E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV1_2986 d87ccd5d729c90c5121d4393525033cb 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.006 T 14-10-2018 VV1_2510 eefcf8c482187d9c8641227635748e6c 158 SUPERFAMILY SSF55729 3 154 3.9E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2510 eefcf8c482187d9c8641227635748e6c 158 Gene3D G3DSA:3.40.630.30 1 156 1.1E-27 T 14-10-2018 VV1_2510 eefcf8c482187d9c8641227635748e6c 158 Pfam PF13673 Acetyltransferase (GNAT) domain 37 137 4.0E-15 T 14-10-2018 IPR000182 GNAT domain VV2_0935 a7d83ab4002460fe41d43d12b4039e6b 516 Gene3D G3DSA:1.10.10.1710 450 516 4.2E-27 T 14-10-2018 VV2_0935 a7d83ab4002460fe41d43d12b4039e6b 516 Gene3D G3DSA:1.10.579.10 329 449 1.1E-53 T 14-10-2018 VV2_0935 a7d83ab4002460fe41d43d12b4039e6b 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 224 1.5E-69 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VV2_0935 a7d83ab4002460fe41d43d12b4039e6b 516 Gene3D G3DSA:3.40.50.620 8 231 6.6E-102 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV2_0935 a7d83ab4002460fe41d43d12b4039e6b 516 Gene3D G3DSA:1.25.40.80 132 325 6.6E-102 T 14-10-2018 VV2_0935 a7d83ab4002460fe41d43d12b4039e6b 516 SUPERFAMILY SSF48173 230 499 4.19E-63 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VV1_2613 f1431420457592e8b9018db436090bc5 56 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.0E-15 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VV1_2613 f1431420457592e8b9018db436090bc5 56 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.7E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 671 5.4E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 SMART SM00283 443 704 6.6E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 Gene3D G3DSA:1.10.287.950 374 705 1.0E-69 T 14-10-2018 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 Gene3D G3DSA:3.30.450.20 73 233 1.9E-27 T 14-10-2018 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 SUPERFAMILY SSF58104 396 705 6.54E-73 T 14-10-2018 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 SMART SM00304 374 428 4.4E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 Pfam PF02743 Cache domain 50 324 2.7E-14 T 14-10-2018 IPR033479 Double Cache domain 1 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 Pfam PF00672 HAMP domain 376 425 1.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2107 306aee2a6d08a8a5b0ad024239a56433 705 Gene3D G3DSA:3.30.450.20 64 331 1.9E-27 T 14-10-2018 VV2_1611 4ca2ca7850955e874b428efedf4ff158 283 Gene3D G3DSA:3.40.50.1980 23 143 6.2E-34 T 14-10-2018 VV2_1611 4ca2ca7850955e874b428efedf4ff158 283 Pfam PF01497 Periplasmic binding protein 29 257 9.4E-34 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VV2_1611 4ca2ca7850955e874b428efedf4ff158 283 SUPERFAMILY SSF53807 27 281 2.94E-47 T 14-10-2018 VV2_1611 4ca2ca7850955e874b428efedf4ff158 283 Gene3D G3DSA:3.40.50.1980 144 283 1.4E-43 T 14-10-2018 VV1_2576 1ca04f6d2ece2474da4779c41e1c0832 272 Gene3D G3DSA:3.40.190.10 31 255 1.8E-97 T 14-10-2018 VV1_2576 1ca04f6d2ece2474da4779c41e1c0832 272 Pfam PF12849 PBP superfamily domain 31 247 9.6E-30 T 14-10-2018 IPR024370 PBP domain VV1_2576 1ca04f6d2ece2474da4779c41e1c0832 272 Gene3D G3DSA:3.40.190.10 106 218 1.8E-97 T 14-10-2018 VV1_2576 1ca04f6d2ece2474da4779c41e1c0832 272 SUPERFAMILY SSF53850 29 257 1.24E-30 T 14-10-2018 VV2_0262 ea1774bcda5000859225ef639201fdb4 179 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 2.0E-22 T 14-10-2018 IPR000182 GNAT domain VV2_0262 ea1774bcda5000859225ef639201fdb4 179 Gene3D G3DSA:3.40.630.30 2 179 1.0E-36 T 14-10-2018 VV2_0262 ea1774bcda5000859225ef639201fdb4 179 SUPERFAMILY SSF55729 3 172 3.21E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_1527 f85756fb69005a537b2bbee8e6e8e554 91 SUPERFAMILY SSF55729 3 89 5.32E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_1527 f85756fb69005a537b2bbee8e6e8e554 91 Pfam PF14542 GCN5-related N-acetyl-transferase 13 89 8.0E-23 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase VV2_1527 f85756fb69005a537b2bbee8e6e8e554 91 Gene3D G3DSA:3.40.630.30 1 90 3.7E-23 T 14-10-2018 VV1_0028 8a84db157dc92efbc23811c23ccb95c5 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 1.2E-84 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV1_0028 8a84db157dc92efbc23811c23ccb95c5 453 PIRSF PIRSF006066 1 267 1.2E-92 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV1_0028 8a84db157dc92efbc23811c23ccb95c5 453 PIRSF PIRSF006066 272 447 6.1E-50 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV1_0028 8a84db157dc92efbc23811c23ccb95c5 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.2E-116 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV1_1928 80dc63ba4bed91a9d46b738537d2d0c7 700 Pfam PF07196 Flagellin hook IN motif 125 178 2.1E-9 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VV1_1928 80dc63ba4bed91a9d46b738537d2d0c7 700 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 465 689 1.6E-54 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VV1_1928 80dc63ba4bed91a9d46b738537d2d0c7 700 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 3.4E-20 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VV2_1689 d8bf03d4d3889ecea75011946defd94e 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 19 306 3.5E-147 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 VV2_1689 d8bf03d4d3889ecea75011946defd94e 312 SUPERFAMILY SSF53850 20 295 5.97E-90 T 14-10-2018 VV2_1689 d8bf03d4d3889ecea75011946defd94e 312 Gene3D G3DSA:3.40.190.100 109 218 7.1E-97 T 14-10-2018 VV2_1689 d8bf03d4d3889ecea75011946defd94e 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 280 1.0E-62 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VV2_1689 d8bf03d4d3889ecea75011946defd94e 312 Gene3D G3DSA:3.40.190.10 28 289 7.1E-97 T 14-10-2018 VV2_1401 d211e5e726addfd38bfb5104a418339e 477 SUPERFAMILY SSF53383 97 475 7.2E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1401 d211e5e726addfd38bfb5104a418339e 477 SUPERFAMILY SSF46785 10 86 6.48E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1401 d211e5e726addfd38bfb5104a418339e 477 Pfam PF00155 Aminotransferase class I and II 146 458 9.4E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV2_1401 d211e5e726addfd38bfb5104a418339e 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1401 d211e5e726addfd38bfb5104a418339e 477 Gene3D G3DSA:3.40.640.10 145 361 3.4E-77 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1401 d211e5e726addfd38bfb5104a418339e 477 Gene3D G3DSA:1.10.10.10 3 86 2.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1401 d211e5e726addfd38bfb5104a418339e 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1401 d211e5e726addfd38bfb5104a418339e 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1401 d211e5e726addfd38bfb5104a418339e 477 SMART SM00345 16 75 5.8E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV2_1401 d211e5e726addfd38bfb5104a418339e 477 Gene3D G3DSA:3.90.1150.10 116 473 3.4E-77 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 PRINTS PR01398 Isochorismatase signature 184 201 2.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 PRINTS PR01398 Isochorismatase signature 63 80 2.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 PRINTS PR01398 Isochorismatase signature 166 184 2.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 PRINTS PR01398 Isochorismatase signature 110 132 2.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 PRINTS PR01398 Isochorismatase signature 80 99 2.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 PRINTS PR01398 Isochorismatase signature 2 14 2.7E-50 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 Gene3D G3DSA:3.40.50.850 1 209 5.7E-73 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 Pfam PF00550 Phosphopantetheine attachment site 217 277 2.1E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 Gene3D G3DSA:1.10.1200.10 212 286 4.0E-19 T 14-10-2018 IPR036736 ACP-like superfamily VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 Pfam PF00857 Isochorismatase family 32 193 2.2E-31 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 PIRSF PIRSF001111 1 290 1.2E-125 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 SUPERFAMILY SSF47336 213 291 7.2E-9 T 14-10-2018 IPR036736 ACP-like superfamily VV2_0838 ba361b2ba88282e794ec5bea46a67e33 295 SUPERFAMILY SSF52499 1 209 6.02E-60 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 3.3E-134 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:1.10.1200.80 252 322 3.7E-8 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 PIRSF PIRSF006621 1 321 2.7E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 Gene3D G3DSA:3.20.20.70 6 248 1.2E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 SUPERFAMILY SSF51395 10 319 1.03E-90 T 14-10-2018 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.219 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VV1_1232 756b8622d49308e8771e6e5d8c3f9908 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 4.3E-112 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VV2_1452 cc7b8924e10acbff98a801f146d302e9 295 SUPERFAMILY SSF46689 244 294 3.67E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1452 cc7b8924e10acbff98a801f146d302e9 295 Gene3D G3DSA:1.10.10.60 190 241 3.3E-10 T 14-10-2018 VV2_1452 cc7b8924e10acbff98a801f146d302e9 295 SMART SM00342 208 291 3.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1452 cc7b8924e10acbff98a801f146d302e9 295 Pfam PF12833 Helix-turn-helix domain 215 292 2.4E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1452 cc7b8924e10acbff98a801f146d302e9 295 SUPERFAMILY SSF46689 191 242 3.51E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1452 cc7b8924e10acbff98a801f146d302e9 295 Gene3D G3DSA:1.10.10.60 242 295 1.7E-16 T 14-10-2018 VV1_2726 b3418bcb1d179a6c458d38f53ad90b74 159 Gene3D G3DSA:3.40.630.30 6 137 8.2E-33 T 14-10-2018 VV1_2726 b3418bcb1d179a6c458d38f53ad90b74 159 Pfam PF00583 Acetyltransferase (GNAT) family 30 146 5.2E-18 T 14-10-2018 IPR000182 GNAT domain VV1_2726 b3418bcb1d179a6c458d38f53ad90b74 159 SUPERFAMILY SSF55729 4 148 7.15E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_1615 1bcb9f83aa396acf41069ffff2a822ab 457 Gene3D G3DSA:3.80.30.20 28 364 1.7E-73 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VV2_1615 1bcb9f83aa396acf41069ffff2a822ab 457 SMART SM00729 62 285 1.0E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV2_1615 1bcb9f83aa396acf41069ffff2a822ab 457 SUPERFAMILY SSF102114 59 439 3.92E-82 T 14-10-2018 VV2_1615 1bcb9f83aa396acf41069ffff2a822ab 457 Pfam PF04055 Radical SAM superfamily 67 233 1.0E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV2_1615 1bcb9f83aa396acf41069ffff2a822ab 457 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 6.6E-181 T 14-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 SUPERFAMILY SSF56672 4 238 9.78E-94 T 14-10-2018 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 4.9E-6 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 Gene3D G3DSA:1.10.150.20 174 232 2.1E-14 T 14-10-2018 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 Pfam PF00817 impB/mucB/samB family 11 158 4.0E-49 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 SUPERFAMILY SSF100879 245 353 3.14E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 Gene3D G3DSA:3.30.1490.100 241 354 5.9E-25 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 Gene3D G3DSA:2.30.40.20 15 72 1.9E-27 T 14-10-2018 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 37.245 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VV1_1830 84cdbd3fc88b1e64031feca1c29fc175 354 Gene3D G3DSA:3.30.70.270 73 173 3.7E-38 T 14-10-2018 VV1_2697 4a14988f440e0da0bc4660d19180dac9 211 PIRSF PIRSF006324 1 210 4.8E-56 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_2697 4a14988f440e0da0bc4660d19180dac9 211 Pfam PF01810 LysE type translocator 15 208 9.8E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_1321 879a5e3c565d7f8593d43e1c3eef2524 325 SUPERFAMILY SSF53474 31 299 1.33E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_1321 879a5e3c565d7f8593d43e1c3eef2524 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 1.2E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_1321 879a5e3c565d7f8593d43e1c3eef2524 325 PIRSF PIRSF005211 1 324 2.8E-104 T 14-10-2018 IPR012020 AB hydrolase 4 family VV1_2234 bf58b872f06a5a5c8656150995021711 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 23 195 4.4E-62 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV1_2234 bf58b872f06a5a5c8656150995021711 198 SUPERFAMILY SSF142695 19 172 2.88E-54 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV1_2234 bf58b872f06a5a5c8656150995021711 198 Pfam PF00925 GTP cyclohydrolase II 19 171 2.0E-59 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV1_2234 bf58b872f06a5a5c8656150995021711 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 38.597 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV1_2234 bf58b872f06a5a5c8656150995021711 198 Gene3D G3DSA:3.40.50.10990 5 174 6.9E-64 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VV1_1221 dd73805aa2dc4fe311bfd2c041250fcb 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 2.5E-46 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV1_1221 dd73805aa2dc4fe311bfd2c041250fcb 308 Gene3D G3DSA:3.40.50.720 32 300 1.2E-97 T 14-10-2018 VV1_1221 dd73805aa2dc4fe311bfd2c041250fcb 308 Gene3D G3DSA:3.40.50.720 92 277 1.2E-97 T 14-10-2018 VV1_1221 dd73805aa2dc4fe311bfd2c041250fcb 308 SUPERFAMILY SSF52283 9 115 4.99E-7 T 14-10-2018 VV1_1221 dd73805aa2dc4fe311bfd2c041250fcb 308 SUPERFAMILY SSF51735 94 274 1.6E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_3170 5bd892c140cfab5704f5bb2547fb07e1 292 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 130 150 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VV1_3170 5bd892c140cfab5704f5bb2547fb07e1 292 Gene3D G3DSA:1.10.12.10 230 280 5.5E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VV1_3170 5bd892c140cfab5704f5bb2547fb07e1 292 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 22 291 56.704 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VV1_3170 5bd892c140cfab5704f5bb2547fb07e1 292 Gene3D G3DSA:3.90.226.10 7 229 5.7E-85 T 14-10-2018 VV1_3170 5bd892c140cfab5704f5bb2547fb07e1 292 SUPERFAMILY SSF52096 23 288 8.54E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV1_3170 5bd892c140cfab5704f5bb2547fb07e1 292 TIGRFAM TIGR01929 menB: naphthoate synthase 29 288 2.2E-146 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VV1_3170 5bd892c140cfab5704f5bb2547fb07e1 292 Pfam PF00378 Enoyl-CoA hydratase/isomerase 38 286 3.8E-78 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VV1_2289 4d83ffe3e0d32552346e8a06d6d7eba5 288 Pfam PF01734 Patatin-like phospholipase 4 168 3.2E-14 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VV1_2289 4d83ffe3e0d32552346e8a06d6d7eba5 288 SUPERFAMILY SSF52151 3 260 1.2E-31 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VV1_2289 4d83ffe3e0d32552346e8a06d6d7eba5 288 Gene3D G3DSA:3.40.1090.10 1 90 8.1E-9 T 14-10-2018 VV1_2289 4d83ffe3e0d32552346e8a06d6d7eba5 288 Gene3D G3DSA:3.40.1090.10 91 225 3.8E-8 T 14-10-2018 VV1_1340 296911a542d8594d3417f249a43a4767 62 Gene3D G3DSA:1.10.10.1100 1 57 1.2E-19 T 14-10-2018 VV1_1340 296911a542d8594d3417f249a43a4767 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.1E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PIRSF PIRSF001480 13 405 1.9E-103 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 Gene3D G3DSA:2.60.120.10 21 291 3.9E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 47 62 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 95 116 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 140 163 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 PRINTS PR00714 Phosphomannose isomerase type I signature 19 37 5.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 140 148 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 Gene3D G3DSA:1.10.441.10 164 316 3.9E-132 T 14-10-2018 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 Pfam PF01238 Phosphomannose isomerase type I 17 368 4.3E-87 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 Gene3D G3DSA:2.60.120.10 317 398 3.9E-132 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 SUPERFAMILY SSF51182 16 396 3.06E-106 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 15 397 2.0E-95 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV2_1348 8786fd9b8a5e57cdc6b7e65892fde9e3 405 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 271 296 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VV1_2395 db2fd158ecfc839c833f0c60e2d28797 247 Pfam PF07070 SpoOM protein 2 215 3.8E-62 T 14-10-2018 IPR009776 Sporulation stage 0, protein M VV1_0486 3ed59c0ba6cb6cb0adb461c566a78bea 107 Gene3D G3DSA:3.30.160.100 1 105 5.1E-33 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VV1_0486 3ed59c0ba6cb6cb0adb461c566a78bea 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 7.7E-31 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VV1_0486 3ed59c0ba6cb6cb0adb461c566a78bea 107 SUPERFAMILY SSF69754 1 102 1.09E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like VV1_0486 3ed59c0ba6cb6cb0adb461c566a78bea 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.7E-22 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 515 542 1.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 544 573 1.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 SUPERFAMILY SSF58104 378 677 1.44E-64 T 14-10-2018 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 40 323 4.6E-64 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain VV1_3142 7d48daa02eaf191afb19d251f5440688 678 Gene3D G3DSA:3.30.450.20 177 328 2.3E-12 T 14-10-2018 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 644 3.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 SUPERFAMILY SSF103190 115 211 1.18E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VV1_3142 7d48daa02eaf191afb19d251f5440688 678 SMART SM00283 417 678 1.5E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_3142 7d48daa02eaf191afb19d251f5440688 678 Gene3D G3DSA:1.10.287.950 348 678 1.7E-67 T 14-10-2018 VV1_2754 c21061b083d5ffe7043c0e01505c3a75 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 7.5E-36 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VV1_2754 c21061b083d5ffe7043c0e01505c3a75 235 SUPERFAMILY SSF51695 3 234 1.74E-64 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VV1_2754 c21061b083d5ffe7043c0e01505c3a75 235 Gene3D G3DSA:3.20.20.190 1 235 3.6E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VV2_0963 937341f862a783a73d24bc084a414cca 144 Pfam PF13279 Thioesterase-like superfamily 16 136 3.5E-21 T 14-10-2018 VV2_0963 937341f862a783a73d24bc084a414cca 144 SUPERFAMILY SSF54637 8 137 8.78E-34 T 14-10-2018 IPR029069 HotDog domain superfamily VV2_0963 937341f862a783a73d24bc084a414cca 144 Gene3D G3DSA:3.10.129.10 3 137 2.0E-40 T 14-10-2018 VV2_0912 3f61d007283204bb9f21b0492c086473 106 PIRSF PIRSF029883 1 106 7.7E-38 T 14-10-2018 IPR025499 Pectin degradation protein KdgF VV2_0912 3f61d007283204bb9f21b0492c086473 106 SUPERFAMILY SSF51182 10 104 2.4E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_0912 3f61d007283204bb9f21b0492c086473 106 Gene3D G3DSA:2.60.120.10 1 106 2.1E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_0912 3f61d007283204bb9f21b0492c086473 106 Pfam PF07883 Cupin domain 32 87 1.4E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VV1_1869 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 Gene3D G3DSA:3.30.910.20 22 166 2.1E-34 T 14-10-2018 IPR024930 Skp domain superfamily VV1_1869 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 SMART SM00935 12 166 1.1E-39 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VV1_1869 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 PIRSF PIRSF002094 1 166 1.9E-38 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VV1_1869 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 SUPERFAMILY SSF111384 23 165 1.44E-29 T 14-10-2018 VV1_1869 a4754f0d95d5710f5f8fcf2cb6ba6d39 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 164 3.1E-25 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VV1_0695 380b35f0e8e6f1f6a73a39020ac8a8b6 287 SUPERFAMILY SSF52540 1 156 1.46E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0695 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Pfam PF03668 P-loop ATPase protein family 1 284 2.9E-110 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VV1_0695 380b35f0e8e6f1f6a73a39020ac8a8b6 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.506 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VV1_0695 380b35f0e8e6f1f6a73a39020ac8a8b6 287 PIRSF PIRSF005052 1 286 7.4E-107 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 VV1_0090 40f125745e928f7f127fc1e71e82eda5 171 Pfam PF04985 Phage tail tube protein FII 6 170 7.1E-37 T 14-10-2018 IPR006498 Tail tube protein VV1_0090 40f125745e928f7f127fc1e71e82eda5 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 6 170 3.6E-30 T 14-10-2018 IPR006498 Tail tube protein VV1_1463 11664c5354e9d5d9bf5a430c67eae093 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.9E-52 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VV1_1463 11664c5354e9d5d9bf5a430c67eae093 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VV1_1463 11664c5354e9d5d9bf5a430c67eae093 129 Gene3D G3DSA:3.30.1330.40 2 129 5.8E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV1_1463 11664c5354e9d5d9bf5a430c67eae093 129 SUPERFAMILY SSF55298 2 128 2.36E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV1_1463 11664c5354e9d5d9bf5a430c67eae093 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.0E-43 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VV1_1121 aa8f797783b5307dceb4679b2d9a957c 243 Gene3D G3DSA:3.40.50.10090 32 161 6.8E-71 T 14-10-2018 VV1_1121 aa8f797783b5307dceb4679b2d9a957c 243 Gene3D G3DSA:3.40.50.10090 4 240 6.8E-71 T 14-10-2018 VV1_1121 aa8f797783b5307dceb4679b2d9a957c 243 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 228 1.1E-35 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1121 aa8f797783b5307dceb4679b2d9a957c 243 SUPERFAMILY SSF69618 1 241 5.49E-56 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF50104 126 181 1.05E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF02357 Transcription termination factor nusG 7 112 4.4E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:3.30.70.940 1 122 9.1E-48 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 Gene3D G3DSA:2.30.30.30 123 181 8.6E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.01 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 Pfam PF00467 KOW motif 130 162 2.3E-7 T 14-10-2018 IPR005824 KOW VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 1.1E-70 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00738 6 115 3.2E-51 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 SMART SM00739 127 154 7.0E-5 T 14-10-2018 IPR005824 KOW VV1_1206 98f17b9fee2d42ba618b2b0eb6663b30 182 SUPERFAMILY SSF82679 6 116 1.44E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VV1_1155 6c285cc91db329f1762b2ff5516a3668 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1155 6c285cc91db329f1762b2ff5516a3668 225 SUPERFAMILY SSF52540 1 220 1.46E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1155 6c285cc91db329f1762b2ff5516a3668 225 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.6E-90 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VV1_1155 6c285cc91db329f1762b2ff5516a3668 225 Pfam PF00005 ABC transporter 18 165 9.8E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1155 6c285cc91db329f1762b2ff5516a3668 225 SMART SM00382 27 214 6.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1155 6c285cc91db329f1762b2ff5516a3668 225 Gene3D G3DSA:3.40.50.300 1 223 3.3E-62 T 14-10-2018 VV1_0624 4bce0595e48c0848885869d870f5d21e 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 7.1E-25 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_0624 4bce0595e48c0848885869d870f5d21e 160 Gene3D G3DSA:3.30.70.560 1 154 1.3E-33 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_0624 4bce0595e48c0848885869d870f5d21e 160 SUPERFAMILY SSF55083 1 149 4.97E-38 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_0624 4bce0595e48c0848885869d870f5d21e 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 2.1E-29 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VV1_1927 a6211bb39447c2041f940dc1542880cf 142 Gene3D G3DSA:3.30.160.170 38 139 4.7E-14 T 14-10-2018 IPR035924 FlaG-like superfamily VV1_1927 a6211bb39447c2041f940dc1542880cf 142 Pfam PF03646 FlaG protein 40 141 1.4E-24 T 14-10-2018 IPR005186 FlaG protein VV1_1927 a6211bb39447c2041f940dc1542880cf 142 SUPERFAMILY SSF160214 44 141 8.5E-23 T 14-10-2018 IPR035924 FlaG-like superfamily VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 Gene3D G3DSA:1.10.287.40 1 106 8.1E-21 T 14-10-2018 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 9.8E-34 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 1.5E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.042 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 Gene3D G3DSA:3.30.930.10 107 434 4.9E-113 T 14-10-2018 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.7E-171 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 PIRSF PIRSF001529 1 435 1.5E-187 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 3.3E-29 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 SUPERFAMILY SSF55681 118 429 1.49E-97 T 14-10-2018 VV1_2946 46b76fc2af0b54cedb78ebb5b0107ec6 435 SUPERFAMILY SSF46589 1 114 2.51E-27 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VV1_1051 94cc757b4b6b09045e70d3171aba516c 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.953 T 14-10-2018 IPR007456 Smg VV1_1051 94cc757b4b6b09045e70d3171aba516c 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 3.5E-59 T 14-10-2018 IPR007456 Smg VV2_0996 de2b93ccef9f36a44a9dd12a19f196a9 344 Gene3D G3DSA:3.20.20.210 1 344 2.9E-136 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV2_0996 de2b93ccef9f36a44a9dd12a19f196a9 344 PIRSF PIRSF005632 1 344 6.2E-194 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VV2_0996 de2b93ccef9f36a44a9dd12a19f196a9 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 7 331 5.4E-37 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VV2_0996 de2b93ccef9f36a44a9dd12a19f196a9 344 SUPERFAMILY SSF51726 9 343 3.14E-70 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VV2_1614 e7298a89a27419e284561ddcbb927e66 240 Gene3D G3DSA:3.30.1150.10 137 240 2.4E-23 T 14-10-2018 VV2_1614 e7298a89a27419e284561ddcbb927e66 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 178 9.0E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VV2_1614 e7298a89a27419e284561ddcbb927e66 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 178 196 9.0E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VV2_1614 e7298a89a27419e284561ddcbb927e66 240 PRINTS PR01374 Gram-negative bacterial tonB protein signature 72 82 9.0E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VV2_1614 e7298a89a27419e284561ddcbb927e66 240 SUPERFAMILY SSF74653 160 237 5.49E-23 T 14-10-2018 VV2_1614 e7298a89a27419e284561ddcbb927e66 240 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 163 239 1.6E-21 T 14-10-2018 IPR006260 TonB/TolA, C-terminal VV2_1614 e7298a89a27419e284561ddcbb927e66 240 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 162 239 1.3E-23 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 VV1_2788 e5013a3bfb7b0d74b5fd350740b1b7bf 342 SUPERFAMILY SSF52733 3 341 1.22E-114 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VV1_2788 e5013a3bfb7b0d74b5fd350740b1b7bf 342 Pfam PF02277 Phosphoribosyltransferase 2 340 6.2E-128 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VV1_2788 e5013a3bfb7b0d74b5fd350740b1b7bf 342 Gene3D G3DSA:1.10.1610.10 13 340 8.3E-121 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VV1_2788 e5013a3bfb7b0d74b5fd350740b1b7bf 342 Gene3D G3DSA:3.40.50.10210 51 323 8.3E-121 T 14-10-2018 VV1_2788 e5013a3bfb7b0d74b5fd350740b1b7bf 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 2.8E-128 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VV1_2788 e5013a3bfb7b0d74b5fd350740b1b7bf 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 36.473 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VV1_2621 f1620474d7a6e404bf95458220b8e542 399 SMART SM00897 28 227 2.2E-34 T 14-10-2018 IPR013702 FIST domain, N-terminal VV1_2621 f1620474d7a6e404bf95458220b8e542 399 SMART SM01204 228 375 4.7E-28 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VV1_2621 f1620474d7a6e404bf95458220b8e542 399 Pfam PF08495 FIST N domain 32 226 3.6E-22 T 14-10-2018 IPR013702 FIST domain, N-terminal VV1_2621 f1620474d7a6e404bf95458220b8e542 399 Pfam PF10442 FIST C domain 229 374 4.5E-15 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VV1_0539 d5eced9e0634134e9ed69e5e61f57afe 189 Pfam PF01814 Hemerythrin HHE cation binding domain 8 141 2.3E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VV1_0539 d5eced9e0634134e9ed69e5e61f57afe 189 Gene3D G3DSA:1.20.120.520 3 158 1.2E-18 T 14-10-2018 VV1_0269 ceec95278a26740c99a9343278d00dbf 291 SUPERFAMILY SSF56176 201 282 2.64E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VV1_0269 ceec95278a26740c99a9343278d00dbf 291 Pfam PF00571 CBS domain 67 124 2.3E-7 T 14-10-2018 IPR000644 CBS domain VV1_0269 ceec95278a26740c99a9343278d00dbf 291 Pfam PF00571 CBS domain 137 187 2.5E-6 T 14-10-2018 IPR000644 CBS domain VV1_0269 ceec95278a26740c99a9343278d00dbf 291 Gene3D G3DSA:3.10.580.10 49 195 1.4E-54 T 14-10-2018 VV1_0269 ceec95278a26740c99a9343278d00dbf 291 SUPERFAMILY SSF54631 57 199 1.95E-33 T 14-10-2018 VV1_0269 ceec95278a26740c99a9343278d00dbf 291 SMART SM01091 203 281 3.6E-30 T 14-10-2018 IPR005170 Transporter-associated domain VV1_0269 ceec95278a26740c99a9343278d00dbf 291 Pfam PF03471 Transporter associated domain 204 279 8.5E-22 T 14-10-2018 IPR005170 Transporter-associated domain VV1_0269 ceec95278a26740c99a9343278d00dbf 291 Gene3D G3DSA:3.30.465.10 196 288 1.9E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VV1_0269 ceec95278a26740c99a9343278d00dbf 291 SMART SM00116 76 125 0.19 T 14-10-2018 IPR000644 CBS domain VV1_0269 ceec95278a26740c99a9343278d00dbf 291 SMART SM00116 139 187 0.025 T 14-10-2018 IPR000644 CBS domain VV2_0612 41fa67e4d844bdb8c9449fc1639a5768 168 SUPERFAMILY SSF55729 4 155 1.76E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0612 41fa67e4d844bdb8c9449fc1639a5768 168 Gene3D G3DSA:3.40.630.30 3 166 1.6E-38 T 14-10-2018 VV2_0612 41fa67e4d844bdb8c9449fc1639a5768 168 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 2.3E-25 T 14-10-2018 IPR000182 GNAT domain VV2_1621 95101d505a13feed3a9dcce2cf834dea 141 Gene3D G3DSA:3.40.50.620 2 141 1.2E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV2_1621 95101d505a13feed3a9dcce2cf834dea 141 Pfam PF00582 Universal stress protein family 3 138 5.6E-13 T 14-10-2018 IPR006016 UspA VV2_1621 95101d505a13feed3a9dcce2cf834dea 141 PIRSF PIRSF006276 1 141 5.8E-43 T 14-10-2018 IPR006015 Universal stress protein A VV2_1621 95101d505a13feed3a9dcce2cf834dea 141 SUPERFAMILY SSF52402 3 138 1.42E-24 T 14-10-2018 VV1_2724 47f282510fc1f99863095eca194937b0 476 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV1_2724 47f282510fc1f99863095eca194937b0 476 Pfam PF00293 NUDIX domain 37 129 9.5E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_2724 47f282510fc1f99863095eca194937b0 476 SUPERFAMILY SSF48317 189 357 1.16E-6 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VV1_2724 47f282510fc1f99863095eca194937b0 476 SUPERFAMILY SSF55811 35 166 1.04E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_2724 47f282510fc1f99863095eca194937b0 476 Pfam PF01569 PAP2 superfamily 245 358 2.4E-7 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV1_2724 47f282510fc1f99863095eca194937b0 476 Gene3D G3DSA:3.90.79.10 18 131 6.5E-13 T 14-10-2018 VV2_0745 c458f057708d5e2665f1926506a7711e 614 Gene3D G3DSA:3.30.1360.200 296 423 9.2E-24 T 14-10-2018 VV2_0745 c458f057708d5e2665f1926506a7711e 614 Gene3D G3DSA:3.30.70.3400 221 295 1.2E-15 T 14-10-2018 VV2_0745 c458f057708d5e2665f1926506a7711e 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 13 614 42.852 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VV2_0745 c458f057708d5e2665f1926506a7711e 614 Pfam PF02355 Protein export membrane protein 432 600 5.3E-17 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VV2_0745 c458f057708d5e2665f1926506a7711e 614 SUPERFAMILY SSF82866 409 606 3.01E-41 T 14-10-2018 VV2_0745 c458f057708d5e2665f1926506a7711e 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 136 600 1.8E-130 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VV2_0745 c458f057708d5e2665f1926506a7711e 614 Pfam PF07549 SecD/SecF GG Motif 129 153 6.3E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VV2_0745 c458f057708d5e2665f1926506a7711e 614 Gene3D G3DSA:1.20.1640.10 424 612 8.8E-10 T 14-10-2018 VV2_0745 c458f057708d5e2665f1926506a7711e 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 350 592 9.9E-73 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VV2_0745 c458f057708d5e2665f1926506a7711e 614 Pfam PF13721 SecD export protein N-terminal TM region 12 113 1.1E-23 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain VV2_0950 cb10ddb9792f4bb8ddf6038350125bb6 133 Pfam PF06942 GlpM protein 24 129 1.5E-50 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC VV2_0950 cb10ddb9792f4bb8ddf6038350125bb6 133 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 40 129 2.0E-34 T 14-10-2018 IPR009707 Membrane protein GlpM/YdgC VV1_1084 cf5bd0813c67f5897b97979f2fba3957 150 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 72 146 2.4E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_1084 cf5bd0813c67f5897b97979f2fba3957 150 PRINTS PR00607 Class IE cytochrome C signature 121 133 9.4E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV1_1084 cf5bd0813c67f5897b97979f2fba3957 150 PRINTS PR00607 Class IE cytochrome C signature 136 147 9.4E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV1_1084 cf5bd0813c67f5897b97979f2fba3957 150 PRINTS PR00607 Class IE cytochrome C signature 93 103 9.4E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV1_1084 cf5bd0813c67f5897b97979f2fba3957 150 PRINTS PR00607 Class IE cytochrome C signature 82 93 9.4E-15 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VV1_1084 cf5bd0813c67f5897b97979f2fba3957 150 Gene3D G3DSA:1.10.760.10 72 149 4.7E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_1084 cf5bd0813c67f5897b97979f2fba3957 150 SUPERFAMILY SSF46626 73 147 1.67E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_0446 c102d2999fb728a647ff3435153b4d93 350 Gene3D G3DSA:2.40.10.240 64 163 1.5E-118 T 14-10-2018 VV1_0446 c102d2999fb728a647ff3435153b4d93 350 SUPERFAMILY SSF111337 1 345 1.29E-138 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VV1_0446 c102d2999fb728a647ff3435153b4d93 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 3.1E-134 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VV1_0446 c102d2999fb728a647ff3435153b4d93 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 2.1E-158 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VV1_0446 c102d2999fb728a647ff3435153b4d93 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.258 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VV1_0446 c102d2999fb728a647ff3435153b4d93 350 Gene3D G3DSA:3.40.1780.10 14 345 1.5E-118 T 14-10-2018 VV1_1561 07314a9d2712ad01f4f3f5a320f88053 325 Gene3D G3DSA:2.50.20.10 24 208 6.3E-51 T 14-10-2018 VV1_1561 07314a9d2712ad01f4f3f5a320f88053 325 Pfam PF03888 MucB/RseB N-terminal domain 26 195 2.1E-57 T 14-10-2018 IPR033434 MucB/RseB, N-terminal VV1_1561 07314a9d2712ad01f4f3f5a320f88053 325 PIRSF PIRSF005427 1 318 2.4E-81 T 14-10-2018 IPR005588 MucB/RseB VV1_1561 07314a9d2712ad01f4f3f5a320f88053 325 Gene3D G3DSA:3.30.200.100 217 316 4.7E-27 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VV1_1561 07314a9d2712ad01f4f3f5a320f88053 325 Pfam PF17188 MucB/RseB C-terminal domain 217 311 2.6E-27 T 14-10-2018 IPR033436 MucB/RseB, C-terminal VV2_1595 a61947d27fd44d0ad0d5cfac44f66c25 387 SMART SM00267 214 384 1.5E-57 T 14-10-2018 IPR000160 GGDEF domain VV2_1595 a61947d27fd44d0ad0d5cfac44f66c25 387 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 381 9.1E-52 T 14-10-2018 IPR000160 GGDEF domain VV2_1595 a61947d27fd44d0ad0d5cfac44f66c25 387 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 380 1.3E-45 T 14-10-2018 IPR000160 GGDEF domain VV2_1595 a61947d27fd44d0ad0d5cfac44f66c25 387 SUPERFAMILY SSF55073 230 383 1.26E-48 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1595 a61947d27fd44d0ad0d5cfac44f66c25 387 Gene3D G3DSA:3.30.70.270 216 384 1.1E-54 T 14-10-2018 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 Gene3D G3DSA:3.30.230.10 541 767 7.9E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 Gene3D G3DSA:1.10.8.60 450 536 1.3E-12 T 14-10-2018 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 SUPERFAMILY SSF52540 30 538 2.47E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 SUPERFAMILY SSF54211 564 756 2.24E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 Gene3D G3DSA:3.40.50.300 237 449 1.1E-55 T 14-10-2018 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 Gene3D G3DSA:3.40.50.300 5 191 1.8E-28 T 14-10-2018 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 751 1.2E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.2E-6 T 14-10-2018 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.2E-6 T 14-10-2018 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.2E-6 T 14-10-2018 VV2_0792 8d59ba52aab207a3a7578a092aeb9b56 786 Pfam PF13654 AAA domain 25 539 1.5E-184 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 SUPERFAMILY SSF111369 186 264 1.7E-11 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 Gene3D G3DSA:2.40.50.100 54 86 2.7E-9 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 Gene3D G3DSA:2.40.30.170 224 339 1.5E-35 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 Gene3D G3DSA:1.10.287.470 87 114 2.7E-9 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 SUPERFAMILY SSF111369 52 128 1.83E-8 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 Pfam PF13533 Biotin-lipoyl like 55 99 2.5E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VV2_0170 29d769403887cc667b45c653dc515029 341 SUPERFAMILY SSF111369 119 174 3.4E-6 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 Pfam PF13437 HlyD family secretion protein 209 327 4.8E-15 T 14-10-2018 VV2_0170 29d769403887cc667b45c653dc515029 341 Gene3D G3DSA:1.10.287.470 117 174 1.5E-5 T 14-10-2018 VV2_1284 b262809003a862c5cdfd8542aa48062f 339 Gene3D G3DSA:1.10.3720.10 78 334 2.4E-64 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1284 b262809003a862c5cdfd8542aa48062f 339 SUPERFAMILY SSF161098 82 323 6.54E-55 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1284 b262809003a862c5cdfd8542aa48062f 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 320 6.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_0034 fefd6f68c4b2d8941ecbeb395857f7b0 124 Pfam PF07238 PilZ domain 9 106 2.3E-8 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VV2_1053 697265f8dbd9f89bc68befbc2abf5f64 271 SMART SM00342 183 265 1.1E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1053 697265f8dbd9f89bc68befbc2abf5f64 271 SUPERFAMILY SSF51182 30 191 1.62E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_1053 697265f8dbd9f89bc68befbc2abf5f64 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_1053 697265f8dbd9f89bc68befbc2abf5f64 271 SUPERFAMILY SSF46689 224 266 2.51E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1053 697265f8dbd9f89bc68befbc2abf5f64 271 Pfam PF12833 Helix-turn-helix domain 191 265 1.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1053 697265f8dbd9f89bc68befbc2abf5f64 271 Gene3D G3DSA:1.10.10.60 165 267 1.3E-20 T 14-10-2018 VV2_1053 697265f8dbd9f89bc68befbc2abf5f64 271 Gene3D G3DSA:2.60.120.10 9 102 6.0E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 Pfam PF01430 Hsp33 protein 6 272 2.4E-79 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 Gene3D G3DSA:3.90.1280.10 225 284 4.2E-20 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 Gene3D G3DSA:1.10.287.480 178 224 1.7E-23 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.028 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 SUPERFAMILY SSF118352 224 282 9.29E-18 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 Gene3D G3DSA:3.55.30.10 1 175 9.3E-62 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 PIRSF PIRSF005261 1 284 4.7E-71 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VV1_0880 60537e3cb9dfa6c4d585f1797e154b78 291 SUPERFAMILY SSF64397 4 231 4.71E-75 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VV1_0412 e27a003404963d0d25b444672f796ab8 325 Pfam PF00805 Pentapeptide repeats (8 copies) 90 127 5.1E-8 T 14-10-2018 IPR001646 Pentapeptide repeat VV1_0412 e27a003404963d0d25b444672f796ab8 325 Gene3D G3DSA:1.10.287.70 226 325 6.3E-15 T 14-10-2018 VV1_0412 e27a003404963d0d25b444672f796ab8 325 Pfam PF07885 Ion channel 237 324 1.7E-15 T 14-10-2018 IPR013099 Potassium channel domain VV1_0412 e27a003404963d0d25b444672f796ab8 325 SUPERFAMILY SSF141571 58 138 4.97E-14 T 14-10-2018 VV1_0412 e27a003404963d0d25b444672f796ab8 325 Gene3D G3DSA:2.160.20.100 40 178 1.4E-14 T 14-10-2018 VV1_0412 e27a003404963d0d25b444672f796ab8 325 SUPERFAMILY SSF81324 230 325 4.32E-16 T 14-10-2018 VV1_2665 a77ee2501d12f4a94e0d060cc7b33b2d 377 Pfam PF13579 Glycosyl transferase 4-like domain 34 185 1.3E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VV1_2665 a77ee2501d12f4a94e0d060cc7b33b2d 377 Gene3D G3DSA:3.40.50.2000 185 347 1.3E-46 T 14-10-2018 VV1_2665 a77ee2501d12f4a94e0d060cc7b33b2d 377 Gene3D G3DSA:3.40.50.2000 34 356 1.3E-46 T 14-10-2018 VV1_2665 a77ee2501d12f4a94e0d060cc7b33b2d 377 Pfam PF00534 Glycosyl transferases group 1 201 331 7.2E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_2665 a77ee2501d12f4a94e0d060cc7b33b2d 377 SUPERFAMILY SSF53756 26 360 4.93E-57 T 14-10-2018 VV1_2962 298b6253b63326a4eb18f9d6e19ca957 218 Gene3D G3DSA:3.60.15.10 3 213 1.1E-74 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_2962 298b6253b63326a4eb18f9d6e19ca957 218 Pfam PF00753 Metallo-beta-lactamase superfamily 11 195 4.5E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_2962 298b6253b63326a4eb18f9d6e19ca957 218 SMART SM00849 14 195 4.5E-37 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV1_2962 298b6253b63326a4eb18f9d6e19ca957 218 SUPERFAMILY SSF56281 4 211 2.03E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_1290 357278f54d7977c50fb3542edfccbdc0 187 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 42 166 4.4E-42 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VV1_1290 357278f54d7977c50fb3542edfccbdc0 187 Gene3D G3DSA:3.40.50.300 34 185 2.0E-48 T 14-10-2018 VV1_1290 357278f54d7977c50fb3542edfccbdc0 187 SUPERFAMILY SSF52540 60 181 4.94E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1290 357278f54d7977c50fb3542edfccbdc0 187 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 41 172 4.2E-51 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VV1_2750 41c15bc6253e846da1186da695edd070 295 SUPERFAMILY SSF161098 57 284 5.76E-42 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2750 41c15bc6253e846da1186da695edd070 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 290 7.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2750 41c15bc6253e846da1186da695edd070 295 Gene3D G3DSA:1.10.3720.10 53 294 8.9E-48 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1120 a0a53e920b7ef0a8ef2893311a4c1227 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 62 390 9.9E-102 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VV2_0655 5c38ec81af8405d6224c361938c06695 164 Pfam PF00589 Phage integrase family 3 149 3.0E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV2_0655 5c38ec81af8405d6224c361938c06695 164 SUPERFAMILY SSF56349 3 161 2.94E-35 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV2_0655 5c38ec81af8405d6224c361938c06695 164 Gene3D G3DSA:1.10.443.10 1 163 1.9E-22 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV2_1116 a72139f93734fe4a96f74487d0cda6ec 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 1.7E-95 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VV2_1116 a72139f93734fe4a96f74487d0cda6ec 497 Pfam PF00474 Sodium:solute symporter family 36 437 9.5E-107 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VV2_1116 a72139f93734fe4a96f74487d0cda6ec 497 Gene3D G3DSA:1.20.1730.10 12 495 2.7E-96 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VV2_1116 a72139f93734fe4a96f74487d0cda6ec 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 489 2.7E-220 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 VV1_0775 ce8b08236304e32e9fd34b8559162281 650 Pfam PF13727 CoA-binding domain 69 238 2.8E-11 T 14-10-2018 VV1_0775 ce8b08236304e32e9fd34b8559162281 650 Gene3D G3DSA:3.40.50.720 278 617 2.5E-114 T 14-10-2018 VV1_0775 ce8b08236304e32e9fd34b8559162281 650 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 2.2E-129 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VV1_0775 ce8b08236304e32e9fd34b8559162281 650 SUPERFAMILY SSF51735 145 270 2.87E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0775 ce8b08236304e32e9fd34b8559162281 650 SUPERFAMILY SSF51735 280 559 5.72E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0775 ce8b08236304e32e9fd34b8559162281 650 Gene3D G3DSA:3.40.50.720 143 264 7.4E-32 T 14-10-2018 VV2_0399 090215fe65a2b3b0a1ec87cd3afba6b7 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 124 1.9E-17 T 14-10-2018 IPR000182 GNAT domain VV2_0399 090215fe65a2b3b0a1ec87cd3afba6b7 156 Gene3D G3DSA:3.40.630.30 1 148 1.7E-32 T 14-10-2018 VV2_0399 090215fe65a2b3b0a1ec87cd3afba6b7 156 SUPERFAMILY SSF55729 1 142 2.62E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1391 e1fe0accdb18075ad06a5621ef5de14c 255 Pfam PF04338 Protein of unknown function, DUF481 40 255 3.0E-51 T 14-10-2018 IPR007433 Protein of unknown function DUF481 VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 Gene3D G3DSA:3.20.20.450 549 805 5.3E-86 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 Gene3D G3DSA:3.30.70.270 362 541 5.7E-52 T 14-10-2018 VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 Pfam PF08269 Cache domain 13 305 1.4E-88 T 14-10-2018 IPR004010 Double Cache domain 2 VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 1.2E-39 T 14-10-2018 IPR000160 GGDEF domain VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 SMART SM00267 366 538 2.6E-61 T 14-10-2018 IPR000160 GGDEF domain VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 533 4.4E-42 T 14-10-2018 IPR000160 GGDEF domain VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 Pfam PF00563 EAL domain 554 789 1.6E-65 T 14-10-2018 IPR001633 EAL domain VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 SMART SM01049 50 143 1.7E-23 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 SUPERFAMILY SSF55073 382 540 8.63E-44 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 Gene3D G3DSA:3.30.450.20 203 311 6.0E-19 T 14-10-2018 VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 Gene3D G3DSA:3.30.450.20 50 202 1.4E-36 T 14-10-2018 VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 SMART SM00052 548 794 4.4E-98 T 14-10-2018 IPR001633 EAL domain VV1_2211 e69723d62fa7e28c52a6959faaf793fd 807 SUPERFAMILY SSF141868 553 799 1.11E-81 T 14-10-2018 IPR035919 EAL domain superfamily VV2_1382 4bffd380d6d8bd5a80d8c99f7f1f6485 304 Pfam PF03466 LysR substrate binding domain 94 300 1.6E-40 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1382 4bffd380d6d8bd5a80d8c99f7f1f6485 304 SUPERFAMILY SSF53850 94 301 1.99E-39 T 14-10-2018 VV2_1382 4bffd380d6d8bd5a80d8c99f7f1f6485 304 Gene3D G3DSA:1.10.10.10 9 97 6.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1382 4bffd380d6d8bd5a80d8c99f7f1f6485 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 9.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1382 4bffd380d6d8bd5a80d8c99f7f1f6485 304 SUPERFAMILY SSF46785 10 117 1.21E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1382 4bffd380d6d8bd5a80d8c99f7f1f6485 304 Gene3D G3DSA:3.40.190.10 169 272 7.4E-59 T 14-10-2018 VV2_1382 4bffd380d6d8bd5a80d8c99f7f1f6485 304 Gene3D G3DSA:3.40.190.10 98 298 7.4E-59 T 14-10-2018 VV2_1011 10880a2eb8dea5522f3c240efb010c91 255 SMART SM00382 26 214 8.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1011 10880a2eb8dea5522f3c240efb010c91 255 SUPERFAMILY SSF52540 6 231 1.3E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1011 10880a2eb8dea5522f3c240efb010c91 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1011 10880a2eb8dea5522f3c240efb010c91 255 Gene3D G3DSA:3.40.50.300 1 254 7.6E-67 T 14-10-2018 VV2_1011 10880a2eb8dea5522f3c240efb010c91 255 Pfam PF00005 ABC transporter 18 166 2.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0818 fd2c2e76121454d6d99e745c66bc888a 344 Gene3D G3DSA:3.40.50.2000 1 148 5.6E-29 T 14-10-2018 VV1_0818 fd2c2e76121454d6d99e745c66bc888a 344 Gene3D G3DSA:3.40.50.2000 163 332 2.8E-19 T 14-10-2018 VV1_0818 fd2c2e76121454d6d99e745c66bc888a 344 SUPERFAMILY SSF53756 2 312 4.71E-65 T 14-10-2018 VV1_0818 fd2c2e76121454d6d99e745c66bc888a 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 303 2.3E-15 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VV1_0794 90092e380553225012f7052d0b52ca5a 265 Gene3D G3DSA:3.10.560.10 168 240 1.4E-16 T 14-10-2018 VV1_0794 90092e380553225012f7052d0b52ca5a 265 Pfam PF06251 Capsule biosynthesis GfcC 34 263 7.3E-76 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 VV1_2953 6a07186c7b217c1537f51db8b744f9fb 400 SUPERFAMILY SSF53335 104 192 8.0E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2953 6a07186c7b217c1537f51db8b744f9fb 400 Pfam PF13679 Methyltransferase domain 118 230 3.4E-17 T 14-10-2018 IPR025714 Methyltransferase domain VV2_0997 72cc8ba8f9f862aa076556afcd6af4dd 366 PIRSF PIRSF034367 21 366 7.1E-202 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 VV2_0997 72cc8ba8f9f862aa076556afcd6af4dd 366 Pfam PF08908 Domain of unknown function (DUF1852) 43 363 7.4E-183 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 VV2_1012 0009ae69588b38d690627e34928f7449 298 Pfam PF01497 Periplasmic binding protein 37 273 8.9E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VV2_1012 0009ae69588b38d690627e34928f7449 298 Gene3D G3DSA:3.40.50.1980 123 296 6.1E-56 T 14-10-2018 VV2_1012 0009ae69588b38d690627e34928f7449 298 SUPERFAMILY SSF53807 32 293 8.63E-59 T 14-10-2018 VV2_1012 0009ae69588b38d690627e34928f7449 298 Gene3D G3DSA:3.40.50.1980 21 121 7.0E-25 T 14-10-2018 VV2_1012 0009ae69588b38d690627e34928f7449 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 238 255 2.4E-14 T 14-10-2018 VV2_1012 0009ae69588b38d690627e34928f7449 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 2.4E-14 T 14-10-2018 VV2_1012 0009ae69588b38d690627e34928f7449 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 2.4E-14 T 14-10-2018 VV2_1012 0009ae69588b38d690627e34928f7449 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 2.4E-14 T 14-10-2018 VV2_1012 0009ae69588b38d690627e34928f7449 298 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 2.4E-14 T 14-10-2018 VV1_0371 4c2f73f57841a8715daa3db3336fc62b 161 Gene3D G3DSA:2.40.280.10 8 136 1.3E-43 T 14-10-2018 IPR023620 Small protein B VV1_0371 4c2f73f57841a8715daa3db3336fc62b 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 5.0E-61 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VV1_0371 4c2f73f57841a8715daa3db3336fc62b 161 Pfam PF01668 SmpB protein 15 157 8.1E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VV1_0371 4c2f73f57841a8715daa3db3336fc62b 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.318 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VV1_0371 4c2f73f57841a8715daa3db3336fc62b 161 SUPERFAMILY SSF74982 9 139 7.85E-48 T 14-10-2018 IPR023620 Small protein B VV1_0371 4c2f73f57841a8715daa3db3336fc62b 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site VV1_0371 4c2f73f57841a8715daa3db3336fc62b 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.1E-52 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 VV1_1672 dd78b6da8a08fb932a61dbd1e633386c 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 7.0E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1672 dd78b6da8a08fb932a61dbd1e633386c 328 Gene3D G3DSA:1.10.3720.10 88 327 2.2E-18 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1672 dd78b6da8a08fb932a61dbd1e633386c 328 SUPERFAMILY SSF161098 93 324 2.88E-14 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0368 75f1cbcc8c11661418ed4f5bdd61978f 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.249 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE VV1_0368 75f1cbcc8c11661418ed4f5bdd61978f 119 Pfam PF04355 SmpA / OmlA family 35 102 5.1E-26 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VV1_0368 75f1cbcc8c11661418ed4f5bdd61978f 119 Gene3D G3DSA:3.30.1450.10 34 115 3.1E-25 T 14-10-2018 IPR037873 BamE-like VV1_2934 e7fee7b8b3e7eff1022768b503e6a2c5 430 SUPERFAMILY SSF51905 1 413 1.81E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2934 e7fee7b8b3e7eff1022768b503e6a2c5 430 Gene3D G3DSA:3.50.50.60 1 277 6.2E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2934 e7fee7b8b3e7eff1022768b503e6a2c5 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 299 2.3E-19 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VV1_0801 8c83246771773f07b142d6c40bf719d4 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 2.3E-8 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VV1_0801 8c83246771773f07b142d6c40bf719d4 313 Gene3D G3DSA:3.40.50.720 3 118 7.9E-11 T 14-10-2018 VV1_0801 8c83246771773f07b142d6c40bf719d4 313 SUPERFAMILY SSF51735 4 148 1.06E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0801 8c83246771773f07b142d6c40bf719d4 313 Gene3D G3DSA:3.30.360.10 120 288 1.1E-9 T 14-10-2018 VV2_1460 7033c19203e920bc4900b1aaf79a2350 716 SUPERFAMILY SSF56935 42 704 3.48E-76 T 14-10-2018 VV2_1460 7033c19203e920bc4900b1aaf79a2350 716 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 161 1.2E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV2_1460 7033c19203e920bc4900b1aaf79a2350 716 Pfam PF00593 TonB dependent receptor 259 706 1.1E-19 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV2_1460 7033c19203e920bc4900b1aaf79a2350 716 Gene3D G3DSA:2.40.170.20 175 707 7.5E-30 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV2_1460 7033c19203e920bc4900b1aaf79a2350 716 Gene3D G3DSA:2.170.130.10 32 172 2.1E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VV1_0331 816d851ac4f31aeca5f11de72f8cbaee 429 Pfam PF00860 Permease family 17 391 8.8E-56 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VV1_0331 816d851ac4f31aeca5f11de72f8cbaee 429 PIRSF PIRSF005353 1 429 1.9E-190 T 14-10-2018 IPR026033 Purine permease PbuG-like VV1_3042 c705cf4a3ef05851dbf34f16600b3f8e 377 Gene3D G3DSA:1.10.620.20 2 341 1.4E-144 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VV1_3042 c705cf4a3ef05851dbf34f16600b3f8e 377 SUPERFAMILY SSF47240 3 341 2.08E-112 T 14-10-2018 IPR009078 Ferritin-like superfamily VV1_3042 c705cf4a3ef05851dbf34f16600b3f8e 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3042 c705cf4a3ef05851dbf34f16600b3f8e 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 1.4E-48 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VV1_3145 f69a65a5bc33badcbeedc7bc46734091 583 Pfam PF07969 Amidohydrolase family 86 578 2.1E-119 T 14-10-2018 IPR013108 Amidohydrolase 3 VV1_3145 f69a65a5bc33badcbeedc7bc46734091 583 Gene3D G3DSA:2.30.40.10 44 555 2.7E-133 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_3145 f69a65a5bc33badcbeedc7bc46734091 583 Gene3D G3DSA:3.20.20.140 98 537 2.7E-133 T 14-10-2018 VV1_3145 f69a65a5bc33badcbeedc7bc46734091 583 SUPERFAMILY SSF51556 97 538 1.52E-25 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_3145 f69a65a5bc33badcbeedc7bc46734091 583 Gene3D G3DSA:3.10.310.70 116 245 2.7E-133 T 14-10-2018 VV1_3145 f69a65a5bc33badcbeedc7bc46734091 583 SUPERFAMILY SSF51338 36 578 5.0E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_0767 c2663bdcf49b14d024d79b4aec0b1ee2 1517 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1184 1468 6.7E-40 T 14-10-2018 IPR031161 Peptidase family M60 domain VV1_0767 c2663bdcf49b14d024d79b4aec0b1ee2 1517 Gene3D G3DSA:1.10.390.30 1316 1474 4.8E-11 T 14-10-2018 VV1_0767 c2663bdcf49b14d024d79b4aec0b1ee2 1517 Pfam PF17291 N-terminal domain of M60-like peptidases 1080 1162 8.0E-8 T 14-10-2018 IPR035423 M60-like domain, N-terminal VV1_0767 c2663bdcf49b14d024d79b4aec0b1ee2 1517 SMART SM01276 1083 1386 9.4E-90 T 14-10-2018 IPR031161 Peptidase family M60 domain VV1_0767 c2663bdcf49b14d024d79b4aec0b1ee2 1517 Pfam PF13322 Domain of unknown function (DUF4092) 383 556 1.6E-92 T 14-10-2018 IPR025385 Domain of unknown function DUF4092 VV2_1142 9e7e5f39c945a393f0401782be5ccb57 486 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV2_1142 9e7e5f39c945a393f0401782be5ccb57 486 Pfam PF00367 phosphotransferase system, EIIB 11 40 1.9E-10 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VV2_1142 9e7e5f39c945a393f0401782be5ccb57 486 Gene3D G3DSA:3.30.1360.60 2 79 1.5E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV2_1142 9e7e5f39c945a393f0401782be5ccb57 486 Pfam PF02378 Phosphotransferase system, EIIC 132 413 3.1E-32 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV2_1142 9e7e5f39c945a393f0401782be5ccb57 486 SUPERFAMILY SSF55604 8 80 4.05E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VV1_2474 631e045ce90931ef90ea18f739a1ab14 83 Pfam PF07119 Protein of unknown function (DUF1375) 10 59 5.0E-5 T 14-10-2018 IPR010780 Protein of unknown function DUF1375 VV1_0715 4e241cf31adac820ada71880b500cc83 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 1.0E-76 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VV1_0715 4e241cf31adac820ada71880b500cc83 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 6.2E-86 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VV1_0466 b2f7c4122ea761c03f1acdc0f9feb880 317 Pfam PF12849 PBP superfamily domain 33 289 2.2E-30 T 14-10-2018 IPR024370 PBP domain VV1_0466 b2f7c4122ea761c03f1acdc0f9feb880 317 Gene3D G3DSA:3.40.190.10 34 305 5.5E-97 T 14-10-2018 VV1_0466 b2f7c4122ea761c03f1acdc0f9feb880 317 Gene3D G3DSA:3.40.190.10 119 261 5.5E-97 T 14-10-2018 VV1_0466 b2f7c4122ea761c03f1acdc0f9feb880 317 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 302 9.0E-75 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 VV1_0466 b2f7c4122ea761c03f1acdc0f9feb880 317 SUPERFAMILY SSF53850 33 314 3.88E-65 T 14-10-2018 VV1_0385 95e98c36b5aeb82e4ac38b0222a02fd7 171 Gene3D G3DSA:3.30.420.10 95 170 5.3E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_0385 95e98c36b5aeb82e4ac38b0222a02fd7 171 SUPERFAMILY SSF53098 98 170 1.88E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_0385 95e98c36b5aeb82e4ac38b0222a02fd7 171 Pfam PF00665 Integrase core domain 105 167 2.9E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VV1_0385 95e98c36b5aeb82e4ac38b0222a02fd7 171 Pfam PF13276 HTH-like domain 28 80 3.2E-8 T 14-10-2018 IPR025948 HTH-like domain VV2_1518 4ff1c096d3174cdcd9aa16be3cf285cb 204 SUPERFAMILY SSF103088 49 152 1.15E-15 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_1518 4ff1c096d3174cdcd9aa16be3cf285cb 204 Pfam PF00691 OmpA family 78 169 2.0E-14 T 14-10-2018 IPR006665 OmpA-like domain VV2_1518 4ff1c096d3174cdcd9aa16be3cf285cb 204 PRINTS PR01021 OMPA domain signature 124 140 2.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_1518 4ff1c096d3174cdcd9aa16be3cf285cb 204 PRINTS PR01021 OMPA domain signature 79 101 2.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_1518 4ff1c096d3174cdcd9aa16be3cf285cb 204 PRINTS PR01021 OMPA domain signature 109 124 2.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV2_1518 4ff1c096d3174cdcd9aa16be3cf285cb 204 Gene3D G3DSA:3.30.1330.60 56 174 1.1E-16 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0723 61fb8aa0665acde274895463b110a4ec 191 PIRSF PIRSF000013 1 191 9.1E-94 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VV2_0723 61fb8aa0665acde274895463b110a4ec 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 1.3E-70 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VV2_0723 61fb8aa0665acde274895463b110a4ec 191 Gene3D G3DSA:1.10.3820.10 11 187 9.9E-34 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VV2_0723 61fb8aa0665acde274895463b110a4ec 191 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 4 185 5.8E-95 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 VV2_0723 61fb8aa0665acde274895463b110a4ec 191 SUPERFAMILY SSF48695 16 190 7.03E-56 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV1_0397 54c4d90578924b81fc0dd1699321f0f0 85 Gene3D G3DSA:2.10.230.20 1 36 7.6E-6 T 14-10-2018 VV1_0397 54c4d90578924b81fc0dd1699321f0f0 85 SUPERFAMILY SSF57938 3 64 2.88E-8 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VV2_1545 d02c77fe2fc81e5bee4aa1ff99803241 92 PIRSF PIRSF002855 1 92 7.9E-30 T 14-10-2018 IPR016367 Murein-lipoprotein VV2_1545 d02c77fe2fc81e5bee4aa1ff99803241 92 SUPERFAMILY SSF58042 20 91 1.73E-13 T 14-10-2018 VV2_1545 d02c77fe2fc81e5bee4aa1ff99803241 92 Gene3D G3DSA:1.20.5.190 25 91 5.5E-7 T 14-10-2018 VV2_1545 d02c77fe2fc81e5bee4aa1ff99803241 92 Pfam PF04728 Lipoprotein leucine-zipper 33 92 9.7E-16 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 VV2_1185 4903495fb869c984fd8db0ef787c62a6 81 Pfam PF11391 Protein of unknown function (DUF2798) 13 70 3.7E-18 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 VV1_3201 eef1afeb01c74f90943321e8b6c7f4c8 548 Pfam PF00072 Response regulator receiver domain 10 126 3.0E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3201 eef1afeb01c74f90943321e8b6c7f4c8 548 SUPERFAMILY SSF52172 6 142 3.7E-18 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3201 eef1afeb01c74f90943321e8b6c7f4c8 548 PIRSF PIRSF011521 1 548 1.7E-255 T 14-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB VV1_3201 eef1afeb01c74f90943321e8b6c7f4c8 548 SUPERFAMILY SSF48452 145 300 4.74E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_3201 eef1afeb01c74f90943321e8b6c7f4c8 548 SMART SM00448 8 126 1.3E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3201 eef1afeb01c74f90943321e8b6c7f4c8 548 Gene3D G3DSA:1.25.40.10 140 310 1.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_3201 eef1afeb01c74f90943321e8b6c7f4c8 548 Gene3D G3DSA:3.40.50.2300 2 137 1.7E-17 T 14-10-2018 VV2_1328 6782bf5dffad69b2e3d6edd5baf0bc9e 235 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 36 149 1.5E-9 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VV1_2245 fcc5f640e0bdea527a2e071beab5829c 238 Gene3D G3DSA:3.30.420.10 44 230 7.9E-38 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_2245 fcc5f640e0bdea527a2e071beab5829c 238 SMART SM00479 47 228 1.0E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_2245 fcc5f640e0bdea527a2e071beab5829c 238 Pfam PF00929 Exonuclease 49 219 2.4E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_2245 fcc5f640e0bdea527a2e071beab5829c 238 SUPERFAMILY SSF53098 47 227 9.38E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_0719 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SMART SM00382 35 228 3.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0719 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 SUPERFAMILY SSF52540 5 225 8.8E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0719 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Gene3D G3DSA:3.40.50.300 6 232 4.2E-57 T 14-10-2018 VV1_0719 e5be2ee4dd7480dbfc52f81e4d96f2b9 234 Pfam PF00005 ABC transporter 30 180 2.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0319 faeacaab3881840c69707ebb87565b96 156 Gene3D G3DSA:3.40.50.960 1 156 1.6E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0319 faeacaab3881840c69707ebb87565b96 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.189 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0319 faeacaab3881840c69707ebb87565b96 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 8.9E-57 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0319 faeacaab3881840c69707ebb87565b96 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.5E-54 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV1_0319 faeacaab3881840c69707ebb87565b96 156 SUPERFAMILY SSF52121 4 154 1.03E-59 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VV2_0599 194683c7ad5b7b372ed0ed3d98dfbfbf 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 2.6E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV2_0599 194683c7ad5b7b372ed0ed3d98dfbfbf 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 2.6E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV2_0599 194683c7ad5b7b372ed0ed3d98dfbfbf 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 2.6E-8 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV2_0599 194683c7ad5b7b372ed0ed3d98dfbfbf 365 Pfam PF12698 ABC-2 family transporter protein 25 356 1.3E-48 T 14-10-2018 VV1_0830 fb033baecd821f341bf9f8d6b9c05c26 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 305 1.8E-129 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VV1_0830 fb033baecd821f341bf9f8d6b9c05c26 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 1.4E-75 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV1_0830 fb033baecd821f341bf9f8d6b9c05c26 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 309 46.801 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VV1_0830 fb033baecd821f341bf9f8d6b9c05c26 312 PIRSF PIRSF026649 4 307 4.7E-79 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV2_1677 c5b04026c90088bd229730ddc08c1621 456 Pfam PF03315 Serine dehydratase beta chain 3 153 7.3E-55 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VV2_1677 c5b04026c90088bd229730ddc08c1621 456 Gene3D G3DSA:3.30.1330.90 10 157 1.2E-51 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VV2_1677 c5b04026c90088bd229730ddc08c1621 456 SUPERFAMILY SSF143548 16 155 2.56E-45 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VV2_1677 c5b04026c90088bd229730ddc08c1621 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 4.2E-94 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VV2_1677 c5b04026c90088bd229730ddc08c1621 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 1.5E-200 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 136 185 3.5E-9 T 14-10-2018 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.081 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:3.30.70.20 92 132 5.8E-6 T 14-10-2018 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 SUPERFAMILY SSF54862 37 173 4.45E-31 T 14-10-2018 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 PIRSF PIRSF005784 3 188 1.4E-86 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 2.7E-86 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.0E-14 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.3E-18 T 14-10-2018 VV1_3094 a7517b0b1d3981f44949329ff3a90bc4 198 Gene3D G3DSA:1.10.15.40 38 87 9.2E-8 T 14-10-2018 VV1_2077 99e7284034dbbf1a9fa09160c50bd014 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 254 8.0E-71 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VV2_0670 2a0cc24c0655054235742d8723b4e76f 262 SMART SM00244 6 152 2.4E-7 T 14-10-2018 IPR001107 Band 7 domain VV2_0670 2a0cc24c0655054235742d8723b4e76f 262 TIGRFAM TIGR01933 hflK: HflK protein 5 254 8.5E-70 T 14-10-2018 IPR010201 HflK GO:0016021 VV2_0670 2a0cc24c0655054235742d8723b4e76f 262 Gene3D G3DSA:3.30.479.30 36 142 3.4E-19 T 14-10-2018 VV2_0670 2a0cc24c0655054235742d8723b4e76f 262 SUPERFAMILY SSF117892 40 159 4.32E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VV2_0670 2a0cc24c0655054235742d8723b4e76f 262 Pfam PF01145 SPFH domain / Band 7 family 5 167 8.1E-18 T 14-10-2018 IPR001107 Band 7 domain VV2_0409 d1fea680ec3a5aa7ef3bace06c6c394c 447 Gene3D G3DSA:3.30.2290.10 1 214 4.0E-34 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VV2_0409 d1fea680ec3a5aa7ef3bace06c6c394c 447 Pfam PF01523 Putative modulator of DNA gyrase 24 311 6.4E-43 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VV2_0409 d1fea680ec3a5aa7ef3bace06c6c394c 447 SUPERFAMILY SSF111283 7 445 1.01E-94 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VV2_1267 56a4f37413f59cc3debe42b9e6773941 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 242 5.2E-11 T 14-10-2018 VV2_1267 56a4f37413f59cc3debe42b9e6773941 285 Gene3D G3DSA:3.40.30.10 17 254 1.2E-112 T 14-10-2018 VV2_1267 56a4f37413f59cc3debe42b9e6773941 285 Gene3D G3DSA:1.20.1050.10 132 248 1.2E-112 T 14-10-2018 VV2_1267 56a4f37413f59cc3debe42b9e6773941 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 7.4E-7 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VV2_1267 56a4f37413f59cc3debe42b9e6773941 285 SUPERFAMILY SSF52833 38 130 4.19E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1267 56a4f37413f59cc3debe42b9e6773941 285 SUPERFAMILY SSF47616 132 278 1.27E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VV1_0295 6c6b727d73bdfe022a6f7b3b4c37e2a1 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 9.7E-114 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VV1_0295 6c6b727d73bdfe022a6f7b3b4c37e2a1 258 PIRSF PIRSF029037 1 258 5.5E-115 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VV2_0603 fb4538dbd10ad8ab3d4f953b86f03602 305 Pfam PF01545 Cation efflux family 22 232 2.6E-36 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV2_0603 fb4538dbd10ad8ab3d4f953b86f03602 305 SUPERFAMILY SSF161111 14 233 3.27E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VV2_0603 fb4538dbd10ad8ab3d4f953b86f03602 305 Gene3D G3DSA:1.20.1510.10 18 232 8.5E-33 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VV2_0603 fb4538dbd10ad8ab3d4f953b86f03602 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 304 1.6E-65 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV1_0868 01189e3b3e881cd300ed2d51587c4b6d 163 Gene3D G3DSA:3.30.1360.100 85 163 8.0E-31 T 14-10-2018 VV1_0868 01189e3b3e881cd300ed2d51587c4b6d 163 Pfam PF04612 Type II secretion system (T2SS), protein M 7 162 4.2E-55 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VV1_0868 01189e3b3e881cd300ed2d51587c4b6d 163 SUPERFAMILY SSF103054 85 162 5.23E-24 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VV1_0868 01189e3b3e881cd300ed2d51587c4b6d 163 PIRSF PIRSF006291 2 162 2.1E-40 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VV1_2868 0cfaed069802fbdbc6bad9515af330e9 536 SMART SM00304 205 258 4.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2868 0cfaed069802fbdbc6bad9515af330e9 536 SMART SM00283 273 534 1.1E-71 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2868 0cfaed069802fbdbc6bad9515af330e9 536 SUPERFAMILY SSF58104 230 535 9.68E-72 T 14-10-2018 VV1_2868 0cfaed069802fbdbc6bad9515af330e9 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 501 6.5E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2868 0cfaed069802fbdbc6bad9515af330e9 536 Gene3D G3DSA:1.10.287.950 204 536 2.6E-71 T 14-10-2018 VV1_2868 0cfaed069802fbdbc6bad9515af330e9 536 Pfam PF00672 HAMP domain 206 254 3.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 3.2E-114 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 8.3E-37 T 14-10-2018 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 Gene3D G3DSA:1.10.3860.10 1 419 1.0E-111 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV1_0363 985f54946c385ad9ba394652f16d2d1a 426 SUPERFAMILY SSF118215 5 406 1.07E-103 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV2_0613 4c13d53335e4d3a9b9de9c88d633e572 442 SUPERFAMILY SSF56219 175 440 1.15E-64 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV2_0613 4c13d53335e4d3a9b9de9c88d633e572 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 403 4.7E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VV2_0613 4c13d53335e4d3a9b9de9c88d633e572 442 Gene3D G3DSA:3.60.10.10 169 441 2.3E-64 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VV1_3097 e589d228f3a00295864ee0a9b7cbd11d 211 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 27.227 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VV1_3097 e589d228f3a00295864ee0a9b7cbd11d 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 3.6E-64 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VV1_3097 e589d228f3a00295864ee0a9b7cbd11d 211 Pfam PF04205 FMN-binding domain 100 188 2.7E-18 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VV1_3097 e589d228f3a00295864ee0a9b7cbd11d 211 SMART SM00900 100 192 2.4E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VV1_3097 e589d228f3a00295864ee0a9b7cbd11d 211 PIRSF PIRSF006091 1 205 3.8E-78 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VV1_2679 649d9b43cec7ffe172df86566e4f9231 211 SUPERFAMILY SSF56925 29 181 1.94E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV1_2679 649d9b43cec7ffe172df86566e4f9231 211 Pfam PF13505 Outer membrane protein beta-barrel domain 8 174 1.5E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV2_1543 deb17ba521861969c9445627a90d43c2 471 Gene3D G3DSA:1.10.579.10 291 470 1.2E-79 T 14-10-2018 VV2_1543 deb17ba521861969c9445627a90d43c2 471 Pfam PF00875 DNA photolyase 5 164 3.5E-43 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VV2_1543 deb17ba521861969c9445627a90d43c2 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VV2_1543 deb17ba521861969c9445627a90d43c2 471 PRINTS PR00147 DNA photolyase signature 144 160 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VV2_1543 deb17ba521861969c9445627a90d43c2 471 PRINTS PR00147 DNA photolyase signature 343 361 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VV2_1543 deb17ba521861969c9445627a90d43c2 471 PRINTS PR00147 DNA photolyase signature 323 339 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VV2_1543 deb17ba521861969c9445627a90d43c2 471 PRINTS PR00147 DNA photolyase signature 382 396 2.7E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VV2_1543 deb17ba521861969c9445627a90d43c2 471 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 5.2E-81 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VV2_1543 deb17ba521861969c9445627a90d43c2 471 SUPERFAMILY SSF52425 3 189 1.18E-45 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VV2_1543 deb17ba521861969c9445627a90d43c2 471 SUPERFAMILY SSF48173 193 469 6.54E-106 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VV2_1543 deb17ba521861969c9445627a90d43c2 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VV2_1543 deb17ba521861969c9445627a90d43c2 471 Gene3D G3DSA:1.25.40.80 135 284 1.9E-70 T 14-10-2018 VV2_1543 deb17ba521861969c9445627a90d43c2 471 Gene3D G3DSA:3.40.50.620 5 204 1.9E-70 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0444 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 2.4E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC VV1_0444 0db84054d3bf18f26d3310a9b2f83495 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 2.4E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC VV1_0444 0db84054d3bf18f26d3310a9b2f83495 109 SMART SM01323 17 101 4.0E-39 T 14-10-2018 IPR003849 Preprotein translocase YajC VV1_0444 0db84054d3bf18f26d3310a9b2f83495 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 5.5E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC VV1_0444 0db84054d3bf18f26d3310a9b2f83495 109 Pfam PF02699 Preprotein translocase subunit 21 98 5.7E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC VV1_1248 d4aeb7aa8796984a6325a9a721098fbc 435 PIRSF PIRSF004539 1 435 5.0E-178 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV1_1248 d4aeb7aa8796984a6325a9a721098fbc 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 1.5E-145 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV1_1248 d4aeb7aa8796984a6325a9a721098fbc 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 1.3E-180 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VV2_0868 eaaf0269ab5983b0bbec250a8f429a53 144 Gene3D G3DSA:3.40.630.30 2 137 6.6E-37 T 14-10-2018 VV2_0868 eaaf0269ab5983b0bbec250a8f429a53 144 Pfam PF00583 Acetyltransferase (GNAT) family 34 125 3.7E-16 T 14-10-2018 IPR000182 GNAT domain VV2_0868 eaaf0269ab5983b0bbec250a8f429a53 144 SUPERFAMILY SSF55729 1 134 2.83E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_0378 d546c39e81acd130cb09a45cbfa12848 85 Pfam PF01381 Helix-turn-helix 13 64 2.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_0378 d546c39e81acd130cb09a45cbfa12848 85 SMART SM00530 12 67 0.0012 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_0378 d546c39e81acd130cb09a45cbfa12848 85 SUPERFAMILY SSF47413 5 72 9.47E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_0378 d546c39e81acd130cb09a45cbfa12848 85 Gene3D G3DSA:1.10.260.40 1 84 6.6E-13 T 14-10-2018 VV1_1302 5f655ab88016e86976af29a4435b45a6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 47.14 T 14-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 VV1_1302 5f655ab88016e86976af29a4435b45a6 141 Gene3D G3DSA:1.10.10.10 1 136 2.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1302 5f655ab88016e86976af29a4435b45a6 141 SUPERFAMILY SSF46785 2 131 1.89E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1302 5f655ab88016e86976af29a4435b45a6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.7E-33 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VV1_1302 5f655ab88016e86976af29a4435b45a6 141 Pfam PF02082 Transcriptional regulator 1 82 4.9E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type VV1_1383 415abf7a33e710dd9d49b3dd0d65b19e 363 PIRSF PIRSF001455 4 361 5.5E-109 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VV1_1383 415abf7a33e710dd9d49b3dd0d65b19e 363 Pfam PF01761 3-dehydroquinate synthase 68 325 2.1E-111 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VV1_1383 415abf7a33e710dd9d49b3dd0d65b19e 363 Gene3D G3DSA:1.20.1090.10 173 362 1.8E-71 T 14-10-2018 VV1_1383 415abf7a33e710dd9d49b3dd0d65b19e 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 3.9E-122 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VV1_1383 415abf7a33e710dd9d49b3dd0d65b19e 363 Gene3D G3DSA:3.40.50.1970 1 172 2.9E-66 T 14-10-2018 VV1_1383 415abf7a33e710dd9d49b3dd0d65b19e 363 SUPERFAMILY SSF56796 4 357 3.53E-119 T 14-10-2018 VV1_1383 415abf7a33e710dd9d49b3dd0d65b19e 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 356 74.213 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VV1_0905 872cc9814b77e3d5908f8574bbfb4617 130 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.6E-33 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VV1_0905 872cc9814b77e3d5908f8574bbfb4617 130 Pfam PF02416 mttA/Hcf106 family 4 32 1.9E-5 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VV1_0905 872cc9814b77e3d5908f8574bbfb4617 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-27 T 14-10-2018 VV1_0905 872cc9814b77e3d5908f8574bbfb4617 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-27 T 14-10-2018 VV1_0905 872cc9814b77e3d5908f8574bbfb4617 130 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-27 T 14-10-2018 VV1_0905 872cc9814b77e3d5908f8574bbfb4617 130 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 127 18.098 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VV1_1856 c52a8c2edcdaaebc4ad0736d887c439f 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 32.09 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VV1_1856 c52a8c2edcdaaebc4ad0736d887c439f 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 5.7E-58 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VV1_1856 c52a8c2edcdaaebc4ad0736d887c439f 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 5.0E-68 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.40.50.300 289 565 3.7E-99 T 14-10-2018 VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF52540 170 559 4.14E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.30.450.90 147 286 4.1E-43 T 14-10-2018 VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 SUPERFAMILY SSF160246 3 145 3.92E-39 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 Gene3D G3DSA:3.30.300.160 63 145 5.5E-6 T 14-10-2018 VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 3.0E-23 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 SMART SM00382 314 435 2.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1439 b41823e75d742ee16fab9d0f80fa14a4 574 Pfam PF00437 Type II/IV secretion system protein 189 453 8.8E-77 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_2081 c41a6fba9c7778e07fd307ce0d9e9a69 227 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2081 c41a6fba9c7778e07fd307ce0d9e9a69 227 Gene3D G3DSA:3.40.50.300 1 227 6.0E-65 T 14-10-2018 VV1_2081 c41a6fba9c7778e07fd307ce0d9e9a69 227 Pfam PF00005 ABC transporter 24 172 1.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2081 c41a6fba9c7778e07fd307ce0d9e9a69 227 SUPERFAMILY SSF52540 4 225 2.93E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2081 c41a6fba9c7778e07fd307ce0d9e9a69 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.0E-105 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 VV1_2081 c41a6fba9c7778e07fd307ce0d9e9a69 227 SMART SM00382 33 221 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0151 65d5708341e609cf89183587afb81e59 505 SUPERFAMILY SSF53649 31 485 2.33E-126 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_0151 65d5708341e609cf89183587afb81e59 505 Gene3D G3DSA:3.40.720.10 34 400 2.2E-99 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV2_0151 65d5708341e609cf89183587afb81e59 505 Gene3D G3DSA:3.30.1120.10 401 461 2.2E-99 T 14-10-2018 VV2_0151 65d5708341e609cf89183587afb81e59 505 Pfam PF00884 Sulfatase 34 359 1.3E-66 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV1_0552 46804a3ca20960a9d687b04f99d2aea3 318 Pfam PF16199 Radical_SAM C-terminal domain 209 279 9.0E-18 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VV1_0552 46804a3ca20960a9d687b04f99d2aea3 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 2.7E-135 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 VV1_0552 46804a3ca20960a9d687b04f99d2aea3 318 Gene3D G3DSA:3.80.30.20 41 280 5.4E-17 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VV1_0552 46804a3ca20960a9d687b04f99d2aea3 318 SMART SM00729 23 247 4.7E-44 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VV1_0552 46804a3ca20960a9d687b04f99d2aea3 318 SUPERFAMILY SSF102114 13 268 1.22E-49 T 14-10-2018 VV1_0552 46804a3ca20960a9d687b04f99d2aea3 318 Pfam PF04055 Radical SAM superfamily 43 201 1.3E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_3106 528fb0cb85a09a47c637fbc436b46d05 112 Gene3D G3DSA:3.40.30.10 2 106 2.7E-31 T 14-10-2018 VV1_3106 528fb0cb85a09a47c637fbc436b46d05 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 2.7E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related VV1_3106 528fb0cb85a09a47c637fbc436b46d05 112 Pfam PF00462 Glutaredoxin 16 80 3.5E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV1_3106 528fb0cb85a09a47c637fbc436b46d05 112 SUPERFAMILY SSF52833 1 104 2.53E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_3106 528fb0cb85a09a47c637fbc436b46d05 112 PIRSF PIRSF005894 1 107 3.7E-52 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VV1_2544 d693d123fc8f1c8f2aacf451a9e5717f 159 Gene3D G3DSA:3.40.630.30 11 156 1.3E-22 T 14-10-2018 VV1_2544 d693d123fc8f1c8f2aacf451a9e5717f 159 SUPERFAMILY SSF55729 2 141 8.72E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2544 d693d123fc8f1c8f2aacf451a9e5717f 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 4.6E-11 T 14-10-2018 IPR000182 GNAT domain VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.0E-153 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 SUPERFAMILY SSF51161 296 396 4.71E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 Gene3D G3DSA:3.90.550.10 1 281 1.6E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 SUPERFAMILY SSF53448 3 358 9.86E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 49.57 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 Pfam PF00483 Nucleotidyl transferase 6 272 7.1E-69 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 Gene3D G3DSA:2.160.10.10 282 403 7.3E-32 T 14-10-2018 VV2_0214 ab89fd9159f78719d7fa9fa90c823afd 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VV1_2786 800aab1dc7e626c804c24339c165a117 186 PIRSF PIRSF006135 6 183 2.2E-54 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VV1_2786 800aab1dc7e626c804c24339c165a117 186 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 9 178 1.9E-61 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VV1_2786 800aab1dc7e626c804c24339c165a117 186 Gene3D G3DSA:3.40.50.300 8 181 6.5E-58 T 14-10-2018 VV1_2786 800aab1dc7e626c804c24339c165a117 186 SUPERFAMILY SSF52540 9 181 1.43E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0255 f5013c8cc4853c347e93551589c4bf17 202 Gene3D G3DSA:2.50.20.10 23 202 2.7E-53 T 14-10-2018 VV1_0255 f5013c8cc4853c347e93551589c4bf17 202 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 201 27.197 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VV1_0255 f5013c8cc4853c347e93551589c4bf17 202 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 13 200 8.4E-39 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VV1_0255 f5013c8cc4853c347e93551589c4bf17 202 SUPERFAMILY SSF89392 18 201 4.71E-49 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV1_0255 f5013c8cc4853c347e93551589c4bf17 202 Pfam PF03550 Outer membrane lipoprotein LolB 42 199 3.6E-44 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VV2_1468 d150db3cde12b32c395430eb1ff5b1fa 146 Gene3D G3DSA:3.30.530.20 1 146 1.9E-20 T 14-10-2018 IPR023393 START-like domain superfamily VV2_1468 d150db3cde12b32c395430eb1ff5b1fa 146 SUPERFAMILY SSF55961 2 145 4.88E-22 T 14-10-2018 VV2_1468 d150db3cde12b32c395430eb1ff5b1fa 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 11 143 2.2E-8 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like VV1_3254 6da241681d51ae62f6569ded1622dad3 366 Gene3D G3DSA:1.10.10.60 4 99 1.2E-5 T 14-10-2018 VV1_2330 c1e947f67627c86ce8326aa6496494ea 279 SMART SM00858 43 111 2.4E-5 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VV1_2330 c1e947f67627c86ce8326aa6496494ea 279 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 118 235 9.4E-28 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VV1_2330 c1e947f67627c86ce8326aa6496494ea 279 Pfam PF08666 SAF domain 44 110 3.8E-5 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VV1_2330 c1e947f67627c86ce8326aa6496494ea 279 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 277 8.7E-64 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB VV1_2563 9ad59aab556ef7fee30895fbd7cb6dda 321 Gene3D G3DSA:3.40.1550.10 139 320 3.6E-23 T 14-10-2018 IPR028976 CheC-like superfamily VV1_2563 9ad59aab556ef7fee30895fbd7cb6dda 321 SUPERFAMILY SSF52172 1 112 1.42E-27 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2563 9ad59aab556ef7fee30895fbd7cb6dda 321 SMART SM00448 1 113 2.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2563 9ad59aab556ef7fee30895fbd7cb6dda 321 Pfam PF00072 Response regulator receiver domain 3 109 5.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2563 9ad59aab556ef7fee30895fbd7cb6dda 321 SUPERFAMILY SSF103039 140 319 5.62E-29 T 14-10-2018 IPR028976 CheC-like superfamily VV1_2563 9ad59aab556ef7fee30895fbd7cb6dda 321 Gene3D G3DSA:3.40.50.2300 1 115 3.7E-27 T 14-10-2018 VV2_0365 6d3392962a48683bc6ce58da834d9bdf 162 Gene3D G3DSA:3.40.50.1010 2 161 1.2E-56 T 14-10-2018 VV2_0365 6d3392962a48683bc6ce58da834d9bdf 162 Pfam PF01936 NYN domain 7 155 9.6E-41 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type VV2_0607 0d819425512c426b90f1bf97392bb468 143 SUPERFAMILY SSF54593 6 131 2.2E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_0607 0d819425512c426b90f1bf97392bb468 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 3.3E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV2_0607 0d819425512c426b90f1bf97392bb468 143 Gene3D G3DSA:3.10.180.10 6 141 2.5E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2263 d7837a4701cdca5bee46a314eaf12afe 185 SUPERFAMILY SSF111126 1 177 4.03E-50 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VV1_2263 d7837a4701cdca5bee46a314eaf12afe 185 Gene3D G3DSA:3.90.1520.10 1 183 4.9E-56 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VV1_2263 d7837a4701cdca5bee46a314eaf12afe 185 Pfam PF07700 Haem-NO-binding 2 162 1.4E-38 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VV2_0517 1de3dcb15d076cff85d451a73853b3c5 387 Pfam PF12821 Threonine/Serine exporter, ThrE 255 376 2.6E-7 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE VV2_0517 1de3dcb15d076cff85d451a73853b3c5 387 Pfam PF06738 Putative threonine/serine exporter 97 230 8.9E-15 T 14-10-2018 IPR010619 Putative threonine/serine exporter VV1_0497 a5dd639e1c2d1a886ee287f193f104d1 387 Gene3D G3DSA:3.30.420.40 29 381 2.3E-136 T 14-10-2018 VV1_0497 a5dd639e1c2d1a886ee287f193f104d1 387 SUPERFAMILY SSF53067 23 361 5.7E-28 T 14-10-2018 VV1_0497 a5dd639e1c2d1a886ee287f193f104d1 387 Gene3D G3DSA:3.30.420.40 163 346 2.3E-136 T 14-10-2018 VV1_0497 a5dd639e1c2d1a886ee287f193f104d1 387 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 22 386 42.486 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VV1_0497 a5dd639e1c2d1a886ee287f193f104d1 387 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 23 385 1.3E-166 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VV2_1219 b6c91362fb217a63bb6a3fb10586d693 93 SUPERFAMILY SSF51182 1 93 1.01E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_1219 b6c91362fb217a63bb6a3fb10586d693 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.2E-33 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VV2_1219 b6c91362fb217a63bb6a3fb10586d693 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 25.216 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VV2_1219 b6c91362fb217a63bb6a3fb10586d693 93 Gene3D G3DSA:2.60.120.10 1 93 6.6E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1108 5c75c772f12e63139d4c966e16cbbe6e 497 Gene3D G3DSA:3.30.1120.10 400 482 1.6E-11 T 14-10-2018 VV2_1108 5c75c772f12e63139d4c966e16cbbe6e 497 Gene3D G3DSA:3.40.720.10 4 374 1.7E-82 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV2_1108 5c75c772f12e63139d4c966e16cbbe6e 497 Pfam PF00884 Sulfatase 4 354 3.3E-55 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VV2_1108 5c75c772f12e63139d4c966e16cbbe6e 497 SUPERFAMILY SSF53649 2 472 1.57E-85 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_0408 80c2e94c4cfed073b05c5f9cf67d1fb3 461 Gene3D G3DSA:3.30.2290.10 5 222 1.6E-17 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VV2_0408 80c2e94c4cfed073b05c5f9cf67d1fb3 461 PIRSF PIRSF004919 1 461 1.4E-115 T 14-10-2018 IPR025502 TldD VV2_0408 80c2e94c4cfed073b05c5f9cf67d1fb3 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 1.3E-61 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VV2_0408 80c2e94c4cfed073b05c5f9cf67d1fb3 461 SUPERFAMILY SSF111283 7 459 2.09E-111 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VV2_0395 9d8c337dbb1f22fb376cdfdbd8045ef7 302 SUPERFAMILY SSF53474 78 300 5.57E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0395 9d8c337dbb1f22fb376cdfdbd8045ef7 302 Pfam PF01738 Dienelactone hydrolase family 91 299 1.3E-47 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VV2_0395 9d8c337dbb1f22fb376cdfdbd8045ef7 302 Gene3D G3DSA:3.40.50.1820 63 300 1.0E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 SMART SM01358 13 266 6.7E-56 T 14-10-2018 IPR032255 Helical bimodular sensor domain VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 592 9.3E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 Gene3D G3DSA:1.10.287.950 295 626 4.6E-73 T 14-10-2018 VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 SMART SM00304 295 349 3.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 SUPERFAMILY SSF58104 317 626 1.1E-76 T 14-10-2018 VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 SMART SM00283 363 625 1.3E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 7.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 7.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_0186 3042db2565946c94605ab4a6ec06d48c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 7.3E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VV1_1825 922d5beb07596442bbece8fb3c1a53cd 198 PIRSF PIRSF006102 1 198 1.2E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV1_1825 922d5beb07596442bbece8fb3c1a53cd 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.873 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV1_1825 922d5beb07596442bbece8fb3c1a53cd 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.3E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV1_1825 922d5beb07596442bbece8fb3c1a53cd 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 2.0E-107 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 SUPERFAMILY SSF53850 89 295 2.95E-53 T 14-10-2018 VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 Pfam PF03466 LysR substrate binding domain 89 293 3.9E-51 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 Gene3D G3DSA:1.10.10.10 4 92 5.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 Gene3D G3DSA:3.40.190.10 164 264 2.0E-74 T 14-10-2018 VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 SUPERFAMILY SSF46785 5 113 1.72E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1654 305f5c60995e1c895c69fad8bcf10bc5 307 Gene3D G3DSA:3.40.190.10 93 290 2.0E-74 T 14-10-2018 VV1_1555 9dde520785583ffb8eeec81966728483 170 Pfam PF04073 Aminoacyl-tRNA editing domain 29 145 8.2E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VV1_1555 9dde520785583ffb8eeec81966728483 170 SUPERFAMILY SSF55826 6 157 7.98E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VV1_1555 9dde520785583ffb8eeec81966728483 170 Gene3D G3DSA:3.90.960.10 8 157 2.1E-36 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VV1_0912 141177ad9809c0bc2cbb13fc0f067bab 275 SUPERFAMILY SSF109604 5 254 3.08E-56 T 14-10-2018 VV1_0912 141177ad9809c0bc2cbb13fc0f067bab 275 Gene3D G3DSA:1.10.3210.10 1 270 1.3E-64 T 14-10-2018 VV1_0912 141177ad9809c0bc2cbb13fc0f067bab 275 Pfam PF08668 HDOD domain 13 203 2.6E-52 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VV1_2246 dc7444da49a683c2217c2352989b6efd 625 Gene3D G3DSA:2.60.120.10 1 136 8.5E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_2246 dc7444da49a683c2217c2352989b6efd 625 SUPERFAMILY SSF54631 146 275 5.18E-27 T 14-10-2018 VV1_2246 dc7444da49a683c2217c2352989b6efd 625 SMART SM00100 17 134 1.9E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2246 dc7444da49a683c2217c2352989b6efd 625 SUPERFAMILY SSF51206 5 135 2.62E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_2246 dc7444da49a683c2217c2352989b6efd 625 Pfam PF00027 Cyclic nucleotide-binding domain 38 119 1.5E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain VV1_2246 dc7444da49a683c2217c2352989b6efd 625 Gene3D G3DSA:3.10.580.10 143 278 9.3E-32 T 14-10-2018 VV1_2246 dc7444da49a683c2217c2352989b6efd 625 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 438 1.7E-45 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VV1_2246 dc7444da49a683c2217c2352989b6efd 625 SMART SM00116 159 212 0.22 T 14-10-2018 IPR000644 CBS domain VV1_2246 dc7444da49a683c2217c2352989b6efd 625 SMART SM00116 229 276 7.6E-8 T 14-10-2018 IPR000644 CBS domain VV1_2246 dc7444da49a683c2217c2352989b6efd 625 Pfam PF00571 CBS domain 222 274 1.1E-9 T 14-10-2018 IPR000644 CBS domain VV1_2246 dc7444da49a683c2217c2352989b6efd 625 Pfam PF00571 CBS domain 153 210 8.2E-8 T 14-10-2018 IPR000644 CBS domain VV1_2246 dc7444da49a683c2217c2352989b6efd 625 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 618 7.9E-47 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VV2_1455 b99eae51bfd09fac401fe05ba7b368c4 161 Gene3D G3DSA:2.40.440.10 10 161 1.4E-16 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VV2_1455 b99eae51bfd09fac401fe05ba7b368c4 161 SUPERFAMILY SSF141523 25 159 9.02E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VV2_1455 b99eae51bfd09fac401fe05ba7b368c4 161 Pfam PF03734 L,D-transpeptidase catalytic domain 25 159 1.1E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VV1_2268 264face33e98bed0c479247c431620bf 458 Pfam PF04317 YcjX-like family, DUF463 20 457 4.2E-186 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VV1_2268 264face33e98bed0c479247c431620bf 458 PIRSF PIRSF019381 1 458 2.3E-198 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VV2_0999 797095b17425d24e80bfc7dbe66ee733 204 Gene3D G3DSA:2.40.160.20 11 204 7.9E-30 T 14-10-2018 VV2_0999 797095b17425d24e80bfc7dbe66ee733 204 Pfam PF01389 OmpA-like transmembrane domain 21 204 2.3E-17 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VV2_0999 797095b17425d24e80bfc7dbe66ee733 204 SUPERFAMILY SSF56925 20 204 1.18E-23 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV1_2148 f13e75776b3e70724faff091eecaee3a 52 Gene3D G3DSA:3.50.50.60 1 51 2.4E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2148 f13e75776b3e70724faff091eecaee3a 52 SUPERFAMILY SSF51905 1 47 5.44E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_2148 f13e75776b3e70724faff091eecaee3a 52 Pfam PF00732 GMC oxidoreductase 4 38 7.1E-11 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VV2_0703 76a15f1bbc33e181a8495f7016a6b49b 335 Pfam PF11168 Protein of unknown function (DUF2955) 9 147 3.1E-17 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VV2_0818 f4f522c92e1bf10004efaa05e3e290d6 222 Gene3D G3DSA:1.10.3720.10 3 217 1.5E-41 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0818 f4f522c92e1bf10004efaa05e3e290d6 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 3.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_0818 f4f522c92e1bf10004efaa05e3e290d6 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 3.7E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VV2_0818 f4f522c92e1bf10004efaa05e3e290d6 222 SUPERFAMILY SSF161098 9 202 1.44E-31 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1958 8a3b03816dcdb949f58195257adaaefd 356 PIRSF PIRSF020479 6 355 3.9E-154 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VV1_1958 8a3b03816dcdb949f58195257adaaefd 356 SMART SM00260 206 340 4.0E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_1958 8a3b03816dcdb949f58195257adaaefd 356 SUPERFAMILY SSF50341 209 343 1.7E-13 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV1_1958 8a3b03816dcdb949f58195257adaaefd 356 Pfam PF01584 CheW-like domain 210 342 5.0E-15 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV1_2473 65a2174796688367e8edb46effa6387f 299 PIRSF PIRSF032620 1 299 1.2E-116 T 14-10-2018 IPR014571 Uncharacterised conserved protein UCP032620 VV1_2473 65a2174796688367e8edb46effa6387f 299 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 159 276 5.9E-36 T 14-10-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain VV1_2714 11e2da2072ae4488051c85f376f7f3af 74 SUPERFAMILY SSF53335 2 70 8.05E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2714 11e2da2072ae4488051c85f376f7f3af 74 Gene3D G3DSA:3.40.50.150 1 74 4.8E-18 T 14-10-2018 VV2_1228 b3777bc899dc40f2b2daf768e0d131bf 287 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 75 205 1.3E-43 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 489 3.6E-175 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 Gene3D G3DSA:3.40.1190.10 108 340 2.5E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 34.805 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 Gene3D G3DSA:3.40.1390.10 3 107 1.7E-28 T 14-10-2018 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 SUPERFAMILY SSF53244 338 489 2.44E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 SUPERFAMILY SSF63418 5 107 1.44E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 Pfam PF01225 Mur ligase family, catalytic domain 25 103 2.5E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 421 1.7E-24 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 Pfam PF08245 Mur ligase middle domain 115 316 3.9E-53 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 Gene3D G3DSA:3.90.190.20 345 492 1.6E-56 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VV1_0583 50e4f464a2a9543e32d03aaa2a333ac6 493 SUPERFAMILY SSF53623 109 335 7.85E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VV2_0860 a5c67049f2e95b138fa826057fcb393a 147 SUPERFAMILY SSF55804 1 146 8.24E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_0860 a5c67049f2e95b138fa826057fcb393a 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 6.3E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV2_0860 a5c67049f2e95b138fa826057fcb393a 147 Gene3D G3DSA:3.40.930.10 1 147 2.2E-56 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_0860 a5c67049f2e95b138fa826057fcb393a 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV1_2900 c36a40a7b9a665b33efd11ab5c307720 280 Gene3D G3DSA:1.20.1080.10 27 280 1.9E-95 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VV1_2900 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 8.7E-115 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VV1_2900 c36a40a7b9a665b33efd11ab5c307720 280 Pfam PF01226 Formate/nitrite transporter 14 275 2.9E-75 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VV1_2900 c36a40a7b9a665b33efd11ab5c307720 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site VV1_2900 c36a40a7b9a665b33efd11ab5c307720 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 1.4E-79 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VV2_0462 b8e39c7adc4ac99ac798483659ff7ee3 216 Gene3D G3DSA:3.40.50.880 1 216 4.6E-89 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_0462 b8e39c7adc4ac99ac798483659ff7ee3 216 SUPERFAMILY SSF52317 1 215 2.21E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_0462 b8e39c7adc4ac99ac798483659ff7ee3 216 PIRSF PIRSF006320 1 216 3.7E-105 T 14-10-2018 IPR026041 Glyoxalase ElbB VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 Pfam PF13091 PLD-like domain 306 444 4.9E-21 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 Pfam PF13091 PLD-like domain 72 193 1.9E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 Gene3D G3DSA:3.30.870.10 49 244 3.0E-37 T 14-10-2018 VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 SUPERFAMILY SSF56024 276 441 1.05E-31 T 14-10-2018 VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 Gene3D G3DSA:3.30.870.10 284 460 8.6E-36 T 14-10-2018 VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 SMART SM00155 395 422 5.2E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 SMART SM00155 161 188 0.34 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_3197 de918c508a5b855a1cb14e1f61a02c6c 501 SUPERFAMILY SSF56024 56 230 1.55E-38 T 14-10-2018 VV1_0203 342647825b3695be2e955ab337ca4857 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 5.0E-23 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain VV1_0203 342647825b3695be2e955ab337ca4857 150 Gene3D G3DSA:2.40.50.140 80 150 1.3E-9 T 14-10-2018 VV1_0203 342647825b3695be2e955ab337ca4857 150 SUPERFAMILY SSF141322 91 147 1.44E-5 T 14-10-2018 VV1_2334 bff8cff9a9a5c71cac9445b3b08926c4 430 Gene3D G3DSA:3.30.450.380 17 177 3.2E-39 T 14-10-2018 VV1_2334 bff8cff9a9a5c71cac9445b3b08926c4 430 Pfam PF00437 Type II/IV secretion system protein 84 360 1.8E-81 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_2334 bff8cff9a9a5c71cac9445b3b08926c4 430 Gene3D G3DSA:3.40.50.300 181 420 5.4E-71 T 14-10-2018 VV1_2334 bff8cff9a9a5c71cac9445b3b08926c4 430 SUPERFAMILY SSF52540 60 366 1.75E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0586 dd0470d2baa103e9bab745795c978898 397 SUPERFAMILY SSF103473 4 384 5.49E-57 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0586 dd0470d2baa103e9bab745795c978898 397 Pfam PF07690 Major Facilitator Superfamily 21 351 1.6E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0586 dd0470d2baa103e9bab745795c978898 397 Gene3D G3DSA:1.20.1720.10 10 385 3.7E-83 T 14-10-2018 VV1_3157 28a3f877dcf7332a62b082e0eb58c814 355 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 338 7.5E-86 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV1_3157 28a3f877dcf7332a62b082e0eb58c814 355 SUPERFAMILY SSF111369 47 262 1.7E-37 T 14-10-2018 VV1_3157 28a3f877dcf7332a62b082e0eb58c814 355 Gene3D G3DSA:2.40.30.170 45 267 2.8E-68 T 14-10-2018 VV1_3157 28a3f877dcf7332a62b082e0eb58c814 355 Gene3D G3DSA:2.40.50.100 57 185 2.8E-68 T 14-10-2018 VV1_3157 28a3f877dcf7332a62b082e0eb58c814 355 Gene3D G3DSA:1.10.287.470 92 151 2.8E-68 T 14-10-2018 VV1_3157 28a3f877dcf7332a62b082e0eb58c814 355 Gene3D G3DSA:2.40.420.20 268 335 2.8E-68 T 14-10-2018 VV1_3157 28a3f877dcf7332a62b082e0eb58c814 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 257 1.5E-30 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_0691 480d699968dbb75a5e5732500c592b15 241 Gene3D G3DSA:3.40.50.300 2 241 1.7E-71 T 14-10-2018 VV1_0691 480d699968dbb75a5e5732500c592b15 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0691 480d699968dbb75a5e5732500c592b15 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.4E-126 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VV1_0691 480d699968dbb75a5e5732500c592b15 241 SUPERFAMILY SSF52540 3 237 2.43E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0691 480d699968dbb75a5e5732500c592b15 241 Pfam PF00005 ABC transporter 20 166 5.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0691 480d699968dbb75a5e5732500c592b15 241 SMART SM00382 28 202 2.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0691 480d699968dbb75a5e5732500c592b15 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.4E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VV2_1429 dec74ddc65630edc1aa75264dace508f 267 Gene3D G3DSA:3.40.50.1000 9 260 3.4E-79 T 14-10-2018 IPR023214 HAD superfamily VV2_1429 dec74ddc65630edc1aa75264dace508f 267 Gene3D G3DSA:3.30.1240.10 85 190 3.4E-79 T 14-10-2018 VV2_1429 dec74ddc65630edc1aa75264dace508f 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 1.7E-61 T 14-10-2018 VV2_1429 dec74ddc65630edc1aa75264dace508f 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 9.4E-21 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VV2_1429 dec74ddc65630edc1aa75264dace508f 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 2.0E-52 T 14-10-2018 IPR000150 Cof family GO:0016787 VV2_1429 dec74ddc65630edc1aa75264dace508f 267 SUPERFAMILY SSF56784 3 264 1.18E-68 T 14-10-2018 IPR036412 HAD-like superfamily VV1_0243 0699a658952e0904258d5e9f61a76a1d 286 Pfam PF01963 TraB family 23 275 3.1E-60 T 14-10-2018 IPR002816 Pheromone shutdown, TraB VV2_1085 41e9e9f4c20ab28534fb78a5f632b6a1 293 Gene3D G3DSA:3.20.20.150 2 287 7.4E-69 T 14-10-2018 VV2_1085 41e9e9f4c20ab28534fb78a5f632b6a1 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 7 285 7.3E-101 T 14-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 VV2_1085 41e9e9f4c20ab28534fb78a5f632b6a1 293 Pfam PF01261 Xylose isomerase-like TIM barrel 29 238 2.8E-33 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VV2_1085 41e9e9f4c20ab28534fb78a5f632b6a1 293 SUPERFAMILY SSF51658 3 285 1.09E-54 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily VV1_0885 76c945c12390c235fa326e733dd13a5a 313 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 2.8E-82 T 14-10-2018 IPR017039 Virulence factor BrkB VV1_0885 76c945c12390c235fa326e733dd13a5a 313 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 296 23.986 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VV1_0885 76c945c12390c235fa326e733dd13a5a 313 Pfam PF03631 Virulence factor BrkB 32 280 7.5E-58 T 14-10-2018 IPR017039 Virulence factor BrkB VV1_0885 76c945c12390c235fa326e733dd13a5a 313 PIRSF PIRSF035875 7 300 4.2E-54 T 14-10-2018 IPR017039 Virulence factor BrkB VV1_2853 e8739fcb2b71a50bb30ca7c4b1cea054 437 Pfam PF07394 Protein of unknown function (DUF1501) 33 418 1.1E-71 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 VV1_0342 61e335059bb361bd49212b2d3d0696c6 181 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 44.1 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VV1_0342 61e335059bb361bd49212b2d3d0696c6 181 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VV1_0342 61e335059bb361bd49212b2d3d0696c6 181 Gene3D G3DSA:3.40.140.10 6 171 1.9E-62 T 14-10-2018 VV1_0342 61e335059bb361bd49212b2d3d0696c6 181 SUPERFAMILY SSF53927 9 161 2.01E-54 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VV1_0342 61e335059bb361bd49212b2d3d0696c6 181 Pfam PF14437 MafB19-like deaminase 12 157 7.3E-31 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VV1_1836 dac668854aaa3a43dc81ca9773c6c435 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-27 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VV1_1836 dac668854aaa3a43dc81ca9773c6c435 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 2.3E-36 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VV1_1836 dac668854aaa3a43dc81ca9773c6c435 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 28.429 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 VV1_1930 c478bbe12d54992067064800c734d6f8 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 7.7E-24 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VV1_1930 c478bbe12d54992067064800c734d6f8 136 PIRSF PIRSF039090 1 132 2.0E-42 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VV1_1930 c478bbe12d54992067064800c734d6f8 136 Gene3D G3DSA:1.20.120.340 2 126 8.0E-39 T 14-10-2018 VV1_1930 c478bbe12d54992067064800c734d6f8 136 SUPERFAMILY SSF101116 6 127 2.62E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VV1_1930 c478bbe12d54992067064800c734d6f8 136 Pfam PF02561 Flagellar protein FliS 6 122 8.5E-37 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.1E-138 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_0219 e11e198f641d12b5079b2175ce4db142 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 6.9E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VV1_2067 366f0c8fdd6a24fe629126ac9cc19efa 116 SUPERFAMILY SSF54197 2 113 2.94E-34 T 14-10-2018 IPR036265 HIT-like superfamily VV1_2067 366f0c8fdd6a24fe629126ac9cc19efa 116 Pfam PF01230 HIT domain 12 108 1.2E-28 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VV1_2067 366f0c8fdd6a24fe629126ac9cc19efa 116 Gene3D G3DSA:3.30.428.10 1 111 8.0E-36 T 14-10-2018 IPR036265 HIT-like superfamily VV1_2067 366f0c8fdd6a24fe629126ac9cc19efa 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site VV1_2067 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 6 22 1.1E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VV1_2067 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 27 45 1.1E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VV1_2067 366f0c8fdd6a24fe629126ac9cc19efa 116 PRINTS PR00332 Histidine triad family signature 95 105 1.1E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VV2_0186 d9e257cf9ba262db7295485f948949ca 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.557 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VV2_0186 d9e257cf9ba262db7295485f948949ca 954 Gene3D G3DSA:3.40.640.10 522 747 2.7E-58 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0186 d9e257cf9ba262db7295485f948949ca 954 Gene3D G3DSA:3.40.640.10 95 352 1.6E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0186 d9e257cf9ba262db7295485f948949ca 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 2.8E-8 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VV2_0186 d9e257cf9ba262db7295485f948949ca 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 2.0E-178 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VV2_0186 d9e257cf9ba262db7295485f948949ca 954 SUPERFAMILY SSF53383 454 947 4.29E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0186 d9e257cf9ba262db7295485f948949ca 954 SUPERFAMILY SSF53383 17 438 1.34E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0186 d9e257cf9ba262db7295485f948949ca 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VV2_0186 d9e257cf9ba262db7295485f948949ca 954 Gene3D G3DSA:3.90.1150.10 760 896 1.1E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_1606 cef4f720998b3fcdbd076f972ec62ca4 525 SUPERFAMILY SSF55931 10 518 8.5E-199 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VV1_1606 cef4f720998b3fcdbd076f972ec62ca4 525 Gene3D G3DSA:3.30.590.20 21 525 2.2E-191 T 14-10-2018 VV1_1606 cef4f720998b3fcdbd076f972ec62ca4 525 Pfam PF04262 Glutamate-cysteine ligase 18 382 2.9E-168 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VV1_1606 cef4f720998b3fcdbd076f972ec62ca4 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 220.117 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VV1_1606 cef4f720998b3fcdbd076f972ec62ca4 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 11 520 7.1E-206 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VV2_0353 45d1b451b255df3b4e6a3c4936d18ef0 461 PIRSF PIRSF006603 4 459 1.6E-62 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_0353 45d1b451b255df3b4e6a3c4936d18ef0 461 Pfam PF01554 MatE 28 188 7.5E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_0353 45d1b451b255df3b4e6a3c4936d18ef0 461 Pfam PF01554 MatE 252 414 2.0E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_0353 45d1b451b255df3b4e6a3c4936d18ef0 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 426 8.5E-55 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1346 858c4d71a7e5909033cba45fc16fc7b4 140 Pfam PF05656 Protein of unknown function (DUF805) 8 138 1.6E-21 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VV1_0180 91ab72c7764e85b906aef2f58bebeb9f 378 Pfam PF01979 Amidohydrolase family 51 374 3.1E-41 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VV1_0180 91ab72c7764e85b906aef2f58bebeb9f 378 SUPERFAMILY SSF51338 1 53 7.83E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_0180 91ab72c7764e85b906aef2f58bebeb9f 378 SUPERFAMILY SSF51556 54 347 3.66E-102 T 14-10-2018 IPR032466 Metal-dependent hydrolase VV1_0180 91ab72c7764e85b906aef2f58bebeb9f 378 Gene3D G3DSA:2.30.40.10 6 373 1.4E-144 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VV1_0180 91ab72c7764e85b906aef2f58bebeb9f 378 Gene3D G3DSA:3.20.20.140 55 341 1.4E-144 T 14-10-2018 VV1_0180 91ab72c7764e85b906aef2f58bebeb9f 378 PIRSF PIRSF038994 1 378 5.1E-123 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VV1_0180 91ab72c7764e85b906aef2f58bebeb9f 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 2.3E-156 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VV2_1141 b4046e39d1faab16f8dfa359dd43433e 303 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 190 207 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VV2_1141 b4046e39d1faab16f8dfa359dd43433e 303 Gene3D G3DSA:3.40.50.10490 4 223 8.4E-81 T 14-10-2018 VV2_1141 b4046e39d1faab16f8dfa359dd43433e 303 SUPERFAMILY SSF53697 11 253 1.91E-68 T 14-10-2018 VV2_1141 b4046e39d1faab16f8dfa359dd43433e 303 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 7 300 43.651 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VV2_1141 b4046e39d1faab16f8dfa359dd43433e 303 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 11 300 1.1E-133 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VV2_1141 b4046e39d1faab16f8dfa359dd43433e 303 Gene3D G3DSA:1.10.8.1080 224 302 3.9E-30 T 14-10-2018 VV2_1141 b4046e39d1faab16f8dfa359dd43433e 303 Pfam PF13580 SIS domain 47 169 6.5E-7 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 SUPERFAMILY SSF103088 157 287 1.83E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 Gene3D G3DSA:2.60.40.2540 22 175 1.4E-57 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 Gene3D G3DSA:3.30.1330.60 176 293 3.9E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 Pfam PF00691 OmpA family 187 282 1.4E-18 T 14-10-2018 IPR006665 OmpA-like domain VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.0E-153 T 14-10-2018 VV1_3102 1e162fa53ceb0c898477c897d081eeb8 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.0E-153 T 14-10-2018 VV1_2309 ddfe34743e58ecb85fe2ac3e45cbed2b 401 Gene3D G3DSA:3.40.50.2000 227 380 2.7E-35 T 14-10-2018 VV1_2309 ddfe34743e58ecb85fe2ac3e45cbed2b 401 SUPERFAMILY SSF53756 1 399 1.61E-71 T 14-10-2018 VV1_2309 ddfe34743e58ecb85fe2ac3e45cbed2b 401 Pfam PF13439 Glycosyltransferase Family 4 14 219 4.1E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VV1_2309 ddfe34743e58ecb85fe2ac3e45cbed2b 401 Pfam PF00534 Glycosyl transferases group 1 228 377 8.7E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_1250 151bb4bbdf380782acf543d2cb51c149 176 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.3E-35 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VV1_2728 e1a38cf0bf68c16e767a7bd4513fbd11 626 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 5.5E-11 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VV1_2728 e1a38cf0bf68c16e767a7bd4513fbd11 626 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 1.7E-26 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VV1_2728 e1a38cf0bf68c16e767a7bd4513fbd11 626 SUPERFAMILY SSF56801 3 619 2.75E-152 T 14-10-2018 VV1_2728 e1a38cf0bf68c16e767a7bd4513fbd11 626 Pfam PF00501 AMP-binding enzyme 65 501 4.2E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV1_2728 e1a38cf0bf68c16e767a7bd4513fbd11 626 Gene3D G3DSA:3.40.50.12780 41 494 2.1E-99 T 14-10-2018 VV1_2728 e1a38cf0bf68c16e767a7bd4513fbd11 626 Gene3D G3DSA:3.30.300.30 497 623 3.1E-25 T 14-10-2018 VV1_2728 e1a38cf0bf68c16e767a7bd4513fbd11 626 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV1_0134 2ef1f61a1a39867d51883bf274e6000b 87 Gene3D G3DSA:3.30.1070.10 1 84 2.2E-26 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VV1_0134 2ef1f61a1a39867d51883bf274e6000b 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.817 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VV1_0134 2ef1f61a1a39867d51883bf274e6000b 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 7.4E-34 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VV1_0134 2ef1f61a1a39867d51883bf274e6000b 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 5.3E-23 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VV1_0134 2ef1f61a1a39867d51883bf274e6000b 87 SUPERFAMILY SSF55229 33 86 1.57E-16 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VV2_1040 741188fbdfb6ca006f9123dfb861338a 85 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 9.3E-45 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 VV1_0472 61d3afa206c1ee78d15b0232971455d0 276 SUPERFAMILY SSF55166 23 273 2.67E-92 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VV1_0472 61d3afa206c1ee78d15b0232971455d0 276 PIRSF PIRSF018455 1 276 2.3E-113 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VV1_0472 61d3afa206c1ee78d15b0232971455d0 276 Pfam PF03411 Penicillin-insensitive murein endopeptidase 38 271 9.7E-90 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VV1_0472 61d3afa206c1ee78d15b0232971455d0 276 Gene3D G3DSA:3.30.1380.10 22 275 1.0E-91 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VV2_1594 b7cdb8379096f51cdbce42f52ba2fe5a 304 PIRSF PIRSF016660 1 302 6.3E-122 T 14-10-2018 IPR008526 Inner membrane protein YedI VV2_1594 b7cdb8379096f51cdbce42f52ba2fe5a 304 Pfam PF05661 Protein of unknown function (DUF808) 4 289 6.6E-117 T 14-10-2018 IPR008526 Inner membrane protein YedI VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:1.20.120.140 4 305 3.5E-122 T 14-10-2018 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00962 100 296 6.1E-114 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 SUPERFAMILY SSF47446 329 430 1.08E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 9.0E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00382 99 247 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 SMART SM00963 1 86 1.1E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.9E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:1.10.260.30 328 452 3.5E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 Gene3D G3DSA:3.40.50.300 90 285 3.5E-122 T 14-10-2018 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 SUPERFAMILY SSF52540 42 353 2.1E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.8E-179 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VV1_1612 7a863519309dcbf9e5e98ba7c595d9b7 458 Pfam PF02978 Signal peptide binding domain 329 427 3.5E-34 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VV1_3121 fb9f915034363a777c588139fffd836a 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.8E-19 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VV1_3121 fb9f915034363a777c588139fffd836a 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.597 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VV1_3121 fb9f915034363a777c588139fffd836a 75 Gene3D G3DSA:1.10.3390.10 1 75 3.0E-31 T 14-10-2018 IPR023202 YejL-like superfamily VV1_3121 fb9f915034363a777c588139fffd836a 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 6.0E-33 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VV1_3121 fb9f915034363a777c588139fffd836a 75 SUPERFAMILY SSF158651 1 75 3.27E-29 T 14-10-2018 IPR023202 YejL-like superfamily VV1_3121 fb9f915034363a777c588139fffd836a 75 PIRSF PIRSF006188 1 72 1.2E-34 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 VV1_0008 d9ebeffe9e2f29912b75e9aa8c311e93 180 SUPERFAMILY SSF159594 11 176 1.07E-20 T 14-10-2018 VV1_0008 d9ebeffe9e2f29912b75e9aa8c311e93 180 Gene3D G3DSA:3.40.50.10610 4 179 1.1E-10 T 14-10-2018 VV1_0685 ed48143c9a87bf3ecd03a8452c70a2ab 267 SUPERFAMILY SSF52540 6 242 2.21E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0685 ed48143c9a87bf3ecd03a8452c70a2ab 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0685 ed48143c9a87bf3ecd03a8452c70a2ab 267 SMART SM00382 31 228 6.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0685 ed48143c9a87bf3ecd03a8452c70a2ab 267 Gene3D G3DSA:3.40.50.300 4 259 9.3E-65 T 14-10-2018 VV1_0685 ed48143c9a87bf3ecd03a8452c70a2ab 267 Pfam PF00005 ABC transporter 23 170 1.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 Gene3D G3DSA:1.20.81.30 260 371 6.0E-26 T 14-10-2018 VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 7.9E-21 T 14-10-2018 IPR003004 GspF/PilC family VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 7.9E-21 T 14-10-2018 IPR003004 GspF/PilC family VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 7.9E-21 T 14-10-2018 IPR003004 GspF/PilC family VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 7.9E-21 T 14-10-2018 IPR003004 GspF/PilC family VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 2.6E-26 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 4.8E-30 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VV1_1624 10043d93b47a3a9430321bf140c8a62e 408 Gene3D G3DSA:1.20.81.30 58 175 6.7E-30 T 14-10-2018 VV1_0287 4530c97d350915a013bcdbde1886d6ea 199 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 2.9E-35 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VV1_2002 c17fa26cf2079d7a7c2c57329bb078ed 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 10 177 5.5E-72 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VV1_2002 c17fa26cf2079d7a7c2c57329bb078ed 181 Gene3D G3DSA:3.40.50.2020 1 181 9.9E-66 T 14-10-2018 VV1_2002 c17fa26cf2079d7a7c2c57329bb078ed 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.638 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VV1_2002 c17fa26cf2079d7a7c2c57329bb078ed 181 SUPERFAMILY SSF53271 11 178 1.1E-51 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV1_2002 c17fa26cf2079d7a7c2c57329bb078ed 181 Pfam PF00156 Phosphoribosyl transferase domain 30 145 1.4E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VV1_0061 d83b42255df7b9281a640c8921c64927 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site VV1_0061 d83b42255df7b9281a640c8921c64927 409 SUPERFAMILY SSF53901 216 406 1.75E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0061 d83b42255df7b9281a640c8921c64927 409 SUPERFAMILY SSF53901 2 252 1.56E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0061 d83b42255df7b9281a640c8921c64927 409 SMART SM00825 Beta-ketoacyl synthase 5 409 1.5E-10 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VV1_0061 d83b42255df7b9281a640c8921c64927 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 1.2E-39 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VV1_0061 d83b42255df7b9281a640c8921c64927 409 Gene3D G3DSA:3.40.47.10 261 408 1.5E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_0061 d83b42255df7b9281a640c8921c64927 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 6.8E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VV1_0061 d83b42255df7b9281a640c8921c64927 409 Gene3D G3DSA:3.40.47.10 1 255 3.1E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV1_2609 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 158 309 2.26E-24 T 14-10-2018 VV1_2609 0b36a0fe56ccaa351a7d94627c31dd89 315 SUPERFAMILY SSF52402 4 158 4.19E-26 T 14-10-2018 VV1_2609 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 4 148 6.0E-15 T 14-10-2018 IPR006016 UspA VV1_2609 0b36a0fe56ccaa351a7d94627c31dd89 315 Pfam PF00582 Universal stress protein family 178 301 1.3E-15 T 14-10-2018 IPR006016 UspA VV1_2609 0b36a0fe56ccaa351a7d94627c31dd89 315 Gene3D G3DSA:3.40.50.12370 1 312 4.0E-114 T 14-10-2018 VV2_0629 cd9953aa653612351c1cb34272d8e1d8 80 Gene3D G3DSA:3.20.20.70 1 77 1.8E-21 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0629 cd9953aa653612351c1cb34272d8e1d8 80 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 1 68 3.4E-9 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VV2_0629 cd9953aa653612351c1cb34272d8e1d8 80 SUPERFAMILY SSF51412 1 66 5.89E-14 T 14-10-2018 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 SUPERFAMILY SSF53223 4 267 1.01E-109 T 14-10-2018 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 SMART SM00919 268 528 8.0E-131 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PIRSF PIRSF000106 2 560 8.8E-225 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 144 173 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 180 202 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 295 311 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 239 257 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 84 108 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 264 280 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 PRINTS PR00072 Malic enzyme signature 405 421 5.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 SUPERFAMILY SSF51735 268 559 7.58E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 SMART SM01274 78 258 1.3E-107 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 1.4E-102 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 Gene3D G3DSA:3.40.50.10380 13 265 1.9E-114 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 Gene3D G3DSA:3.40.50.720 266 562 5.1E-109 T 14-10-2018 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 2.9E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VV1_2801 4381aa4c36624f27178d16b9877f8cd0 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.362 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VV1_0761 76a5f640560395c958b798b6cd70a827 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.821 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0761 76a5f640560395c958b798b6cd70a827 200 Gene3D G3DSA:3.40.1370.10 5 200 3.1E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0761 76a5f640560395c958b798b6cd70a827 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 4.5E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VV1_0761 76a5f640560395c958b798b6cd70a827 200 SUPERFAMILY SSF52166 10 199 3.53E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0761 76a5f640560395c958b798b6cd70a827 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 7.9E-76 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_2688 e964e715d06752b440a6689ca37f15bb 469 Gene3D G3DSA:1.20.1600.10 22 458 8.0E-63 T 14-10-2018 VV1_2688 e964e715d06752b440a6689ca37f15bb 469 Pfam PF02321 Outer membrane efflux protein 268 446 3.5E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV1_2688 e964e715d06752b440a6689ca37f15bb 469 Pfam PF02321 Outer membrane efflux protein 28 243 5.6E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV1_2688 e964e715d06752b440a6689ca37f15bb 469 SUPERFAMILY SSF56954 2 446 3.14E-68 T 14-10-2018 VV1_0224 150eded8e54afda423ab501251076559 235 Pfam PF13861 FlgD Tudor-like domain 93 229 3.9E-15 T 14-10-2018 IPR025963 FlgD Tudor-like domain VV1_0224 150eded8e54afda423ab501251076559 235 Gene3D G3DSA:2.30.30.910 98 222 1.4E-35 T 14-10-2018 VV1_0224 150eded8e54afda423ab501251076559 235 Gene3D G3DSA:2.60.40.4070 110 196 1.4E-35 T 14-10-2018 VV1_0224 150eded8e54afda423ab501251076559 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.7E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein VV1_0224 150eded8e54afda423ab501251076559 235 Pfam PF13860 FlgD Ig-like domain 117 184 5.1E-19 T 14-10-2018 IPR025965 FlgD Ig-like domain VV1_3085 33df0e61be32082ce7a0b015f5413b1d 81 Pfam PF02597 ThiS family 4 81 9.3E-24 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VV1_3085 33df0e61be32082ce7a0b015f5413b1d 81 SUPERFAMILY SSF54285 1 81 2.06E-23 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VV1_3085 33df0e61be32082ce7a0b015f5413b1d 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.1E-23 T 14-10-2018 VV1_3085 33df0e61be32082ce7a0b015f5413b1d 81 Gene3D G3DSA:3.10.20.30 1 81 7.3E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV2_1676 9df98d6c8163ed0b49a71454c35db951 494 Gene3D G3DSA:1.20.1250.20 7 475 2.2E-58 T 14-10-2018 VV2_1676 9df98d6c8163ed0b49a71454c35db951 494 Pfam PF07690 Major Facilitator Superfamily 10 423 3.5E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_1676 9df98d6c8163ed0b49a71454c35db951 494 SUPERFAMILY SSF103473 9 480 8.63E-18 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 SMART SM00052 502 747 3.6E-101 T 14-10-2018 IPR001633 EAL domain VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 Pfam PF00563 EAL domain 508 742 7.5E-69 T 14-10-2018 IPR001633 EAL domain VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 SUPERFAMILY SSF141868 507 754 1.15E-83 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 SMART SM00267 325 492 1.9E-52 T 14-10-2018 IPR000160 GGDEF domain VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 8.7E-42 T 14-10-2018 IPR000160 GGDEF domain VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 SUPERFAMILY SSF55073 341 489 1.65E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 Gene3D G3DSA:3.30.450.20 81 182 8.5E-7 T 14-10-2018 VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 Gene3D G3DSA:3.20.20.450 505 758 8.2E-89 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 332 488 8.1E-34 T 14-10-2018 IPR000160 GGDEF domain VV2_0548 7b0e3d2570ca5d20d700284efd0692d9 758 Gene3D G3DSA:3.30.70.270 330 504 5.0E-50 T 14-10-2018 VV2_0898 a7af542d44affddaf33c8c9d10969fb8 374 Gene3D G3DSA:3.30.70.360 177 286 4.0E-105 T 14-10-2018 VV2_0898 a7af542d44affddaf33c8c9d10969fb8 374 Pfam PF07687 Peptidase dimerisation domain 175 273 8.0E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VV2_0898 a7af542d44affddaf33c8c9d10969fb8 374 Gene3D G3DSA:3.40.630.10 11 361 4.0E-105 T 14-10-2018 VV2_0898 a7af542d44affddaf33c8c9d10969fb8 374 PIRSF PIRSF037238 1 373 2.6E-147 T 14-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase VV2_0898 a7af542d44affddaf33c8c9d10969fb8 374 SUPERFAMILY SSF55031 177 285 1.57E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VV2_0898 a7af542d44affddaf33c8c9d10969fb8 374 SUPERFAMILY SSF53187 2 373 2.05E-38 T 14-10-2018 VV2_0898 a7af542d44affddaf33c8c9d10969fb8 374 Pfam PF01546 Peptidase family M20/M25/M40 74 370 8.5E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VV2_0887 db766e4d559da87aad66e2d136121147 163 Gene3D G3DSA:1.25.40.10 49 154 1.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0887 db766e4d559da87aad66e2d136121147 163 SUPERFAMILY SSF48452 5 152 2.73E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0887 db766e4d559da87aad66e2d136121147 163 SMART SM00028 35 68 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0887 db766e4d559da87aad66e2d136121147 163 SMART SM00028 72 105 0.0054 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_0887 db766e4d559da87aad66e2d136121147 163 Pfam PF12688 Tetratrico peptide repeat 41 156 1.4E-12 T 14-10-2018 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 Gene3D G3DSA:3.40.50.620 88 223 4.7E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 Gene3D G3DSA:3.40.50.620 13 289 4.7E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 16 242 8.1E-41 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 SUPERFAMILY SSF52374 13 290 5.63E-85 T 14-10-2018 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 13 276 6.5E-112 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 175 185 9.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 16 28 9.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 41 9.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 191 199 9.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 58 9.7E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VV1_1647 aa0d4fc1bf444f571a41666d62399dd0 303 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 13 295 40.984 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VV2_0840 4e4c9ec664c82506d10748050803cd04 542 Gene3D G3DSA:3.40.50.12780 10 441 8.2E-113 T 14-10-2018 VV2_0840 4e4c9ec664c82506d10748050803cd04 542 Pfam PF00501 AMP-binding enzyme 44 446 1.8E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV2_0840 4e4c9ec664c82506d10748050803cd04 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 530 5.7E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VV2_0840 4e4c9ec664c82506d10748050803cd04 542 SUPERFAMILY SSF56801 25 537 8.5E-125 T 14-10-2018 VV2_0840 4e4c9ec664c82506d10748050803cd04 542 Gene3D G3DSA:3.30.300.310 442 540 3.8E-24 T 14-10-2018 VV1_2619 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 SUPERFAMILY SSF46626 21 202 2.81E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_2619 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.1E-80 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VV1_2619 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Gene3D G3DSA:1.10.760.10 46 206 4.8E-72 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_2619 e92f0c5d37c2cd3d4e3f54cbe7491bd0 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 2.4E-81 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VV2_0958 408b313aee85bfddc118be135a369d5b 298 SUPERFAMILY SSF103481 38 139 2.48E-13 T 14-10-2018 VV2_0958 408b313aee85bfddc118be135a369d5b 298 Pfam PF00892 EamA-like transporter family 152 282 8.4E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0958 408b313aee85bfddc118be135a369d5b 298 Pfam PF00892 EamA-like transporter family 9 137 1.8E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0958 408b313aee85bfddc118be135a369d5b 298 SUPERFAMILY SSF103481 189 285 1.7E-15 T 14-10-2018 VV2_0922 8f58cff07ddefd00a9e934c24402b00f 739 Pfam PF13449 Esterase-like activity of phytase 460 720 4.8E-47 T 14-10-2018 IPR027372 Phytase-like domain VV2_0922 8f58cff07ddefd00a9e934c24402b00f 739 SUPERFAMILY SSF50969 107 449 1.8E-17 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VV2_0922 8f58cff07ddefd00a9e934c24402b00f 739 Gene3D G3DSA:2.130.10.10 20 387 1.5E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VV1_2152 bd63a5a1f8679432f64de874453388a7 248 Pfam PF05618 Putative ATP-dependant zinc protease 108 243 1.9E-47 T 14-10-2018 VV1_2152 bd63a5a1f8679432f64de874453388a7 248 SUPERFAMILY SSF50630 108 242 1.73E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VV1_2152 bd63a5a1f8679432f64de874453388a7 248 Gene3D G3DSA:2.40.70.10 105 235 5.6E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VV1_1768 90969c82bafa6b6b7a4a913be21675ec 291 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 124 274 7.1E-19 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain VV1_1768 90969c82bafa6b6b7a4a913be21675ec 291 Gene3D G3DSA:3.40.50.1110 82 288 2.8E-36 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VV1_1768 90969c82bafa6b6b7a4a913be21675ec 291 SUPERFAMILY SSF52266 99 284 6.26E-41 T 14-10-2018 VV1_2312 1ee3e8adb4417340bcea466da7494eee 492 SUPERFAMILY SSF51445 88 282 3.93E-12 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_2312 1ee3e8adb4417340bcea466da7494eee 492 Pfam PF16116 Domain of unknown function (DUF4832) 310 470 2.4E-17 T 14-10-2018 IPR032267 Domain of unknown function DUF4832 VV1_2312 1ee3e8adb4417340bcea466da7494eee 492 Gene3D G3DSA:3.20.20.80 74 240 6.4E-15 T 14-10-2018 VV1_2312 1ee3e8adb4417340bcea466da7494eee 492 Pfam PF02449 Beta-galactosidase 87 200 2.7E-7 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VV2_1055 3495576dfe3975fcf907a755e536a68d 229 SUPERFAMILY SSF50800 3 227 1.2E-70 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VV2_1055 3495576dfe3975fcf907a755e536a68d 229 Pfam PF03475 3-alpha domain 173 215 1.5E-11 T 14-10-2018 IPR005163 3-alpha domain VV2_1055 3495576dfe3975fcf907a755e536a68d 229 Pfam PF03473 MOSC domain 49 163 4.1E-21 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VV2_1055 3495576dfe3975fcf907a755e536a68d 229 Gene3D G3DSA:2.40.33.20 1 229 3.8E-71 T 14-10-2018 VV1_1757 bdbb094e65bf66e64635af8d94f1887f 314 Gene3D G3DSA:1.20.81.30 157 279 1.1E-5 T 14-10-2018 VV1_1757 bdbb094e65bf66e64635af8d94f1887f 314 Pfam PF00482 Type II secretion system (T2SS), protein F 174 302 5.5E-23 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_2470 6f604bc955dcd0530084a6e45521ae8e 119 SUPERFAMILY SSF54593 6 115 1.51E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2470 6f604bc955dcd0530084a6e45521ae8e 119 Gene3D G3DSA:3.10.180.10 1 118 1.9E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2470 6f604bc955dcd0530084a6e45521ae8e 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 9.7E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_2764 3b70d717dac4a58a7e7763ec73731484 271 Gene3D G3DSA:3.40.190.10 49 254 1.3E-23 T 14-10-2018 VV1_2764 3b70d717dac4a58a7e7763ec73731484 271 SUPERFAMILY SSF53850 44 254 1.19E-31 T 14-10-2018 VV1_2764 3b70d717dac4a58a7e7763ec73731484 271 Gene3D G3DSA:3.40.190.10 129 225 1.3E-23 T 14-10-2018 VV1_2764 3b70d717dac4a58a7e7763ec73731484 271 SMART SM00062 43 265 0.009 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2764 3b70d717dac4a58a7e7763ec73731484 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 253 5.9E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2884 5c7e23a652f10f7883714ed49dc32dcf 331 Gene3D G3DSA:3.40.50.300 2 330 1.3E-72 T 14-10-2018 VV1_2884 5c7e23a652f10f7883714ed49dc32dcf 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.2E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_2884 5c7e23a652f10f7883714ed49dc32dcf 331 SMART SM00382 32 253 5.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_2884 5c7e23a652f10f7883714ed49dc32dcf 331 Pfam PF00005 ABC transporter 24 187 2.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2884 5c7e23a652f10f7883714ed49dc32dcf 331 SUPERFAMILY SSF52540 4 269 5.54E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2884 5c7e23a652f10f7883714ed49dc32dcf 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.4E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_2433 8ad6029af3504d910d15ed1eb6ca8b28 100 Gene3D G3DSA:3.30.2310.20 1 96 7.5E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VV1_2433 8ad6029af3504d910d15ed1eb6ca8b28 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 86 9.5E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV1_2433 8ad6029af3504d910d15ed1eb6ca8b28 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 5.3E-19 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV1_2410 8ad6029af3504d910d15ed1eb6ca8b28 100 Gene3D G3DSA:3.30.2310.20 1 96 7.5E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VV1_2410 8ad6029af3504d910d15ed1eb6ca8b28 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 86 9.5E-8 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV1_2410 8ad6029af3504d910d15ed1eb6ca8b28 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 5.3E-19 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV2_0848 b88eec0ae9922c6f1ce88cc99793ee3b 260 SMART SM00849 17 216 6.0E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0848 b88eec0ae9922c6f1ce88cc99793ee3b 260 Pfam PF00753 Metallo-beta-lactamase superfamily 20 216 2.5E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0848 b88eec0ae9922c6f1ce88cc99793ee3b 260 SUPERFAMILY SSF56281 6 234 1.44E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_0848 b88eec0ae9922c6f1ce88cc99793ee3b 260 Gene3D G3DSA:3.60.15.10 5 237 7.5E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 Gene3D G3DSA:2.60.120.10 5 141 3.9E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 SUPERFAMILY SSF54631 154 274 1.52E-24 T 14-10-2018 VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 SMART SM00116 230 277 2.3E-7 T 14-10-2018 IPR000644 CBS domain VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 SMART SM00116 165 213 4.9 T 14-10-2018 IPR000644 CBS domain VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 618 1.7E-44 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 Pfam PF00571 CBS domain 158 208 2.9E-4 T 14-10-2018 IPR000644 CBS domain VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 Pfam PF00571 CBS domain 224 273 2.8E-7 T 14-10-2018 IPR000644 CBS domain VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 436 1.4E-46 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 Gene3D G3DSA:3.10.580.10 149 309 3.7E-26 T 14-10-2018 VV2_0916 e13f89a714916fee6d406ca64f97ddd3 621 SUPERFAMILY SSF51206 11 143 1.83E-14 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like VV1_3081 c2349a08b5ea724374657ba0f393e67e 306 Gene3D G3DSA:1.10.3720.10 85 301 1.0E-22 T 14-10-2018 IPR035906 MetI-like superfamily VV1_3081 c2349a08b5ea724374657ba0f393e67e 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.1E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_3081 c2349a08b5ea724374657ba0f393e67e 306 SUPERFAMILY SSF161098 89 291 6.0E-21 T 14-10-2018 IPR035906 MetI-like superfamily VV1_3164 ce75288484d3bc69757f6d515bc785e8 196 SUPERFAMILY SSF48498 87 193 1.78E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV1_3164 ce75288484d3bc69757f6d515bc785e8 196 Pfam PF13305 WHG domain 92 172 9.7E-13 T 14-10-2018 IPR025996 WHG domain VV1_3164 ce75288484d3bc69757f6d515bc785e8 196 Gene3D G3DSA:1.10.357.10 1 192 5.8E-41 T 14-10-2018 VV1_3164 ce75288484d3bc69757f6d515bc785e8 196 SUPERFAMILY SSF46689 2 77 1.75E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1943 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV1_1943 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV1_1943 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV1_1943 fc353ee4257e682610decd9a1771809b 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VV1_1943 fc353ee4257e682610decd9a1771809b 136 Gene3D G3DSA:2.30.330.10 44 136 4.0E-34 T 14-10-2018 IPR036429 SpoA-like superfamily VV1_1943 fc353ee4257e682610decd9a1771809b 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VV1_1943 fc353ee4257e682610decd9a1771809b 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) VV1_1943 fc353ee4257e682610decd9a1771809b 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 14-10-2018 IPR036429 SpoA-like superfamily VV2_0093 cb8981c164a88b7f21c73078674222a0 175 Pfam PF07811 TadE-like protein 7 35 1.1E-4 T 14-10-2018 IPR012495 TadE-like VV1_0741 53cb1432ef5b20470731faa13e159d32 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.018 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VV1_0741 53cb1432ef5b20470731faa13e159d32 144 Gene3D G3DSA:3.100.10.10 70 144 5.1E-13 T 14-10-2018 VV1_0741 53cb1432ef5b20470731faa13e159d32 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.2E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P VV1_0741 53cb1432ef5b20470731faa13e159d32 144 SUPERFAMILY SSF52080 4 143 4.71E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VV1_0741 53cb1432ef5b20470731faa13e159d32 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.6E-51 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0741 53cb1432ef5b20470731faa13e159d32 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_2575 4875decca2110aec5729b4d4648b8174 232 SUPERFAMILY SSF161098 6 222 2.88E-30 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2575 4875decca2110aec5729b4d4648b8174 232 Gene3D G3DSA:1.10.3720.10 1 229 2.2E-27 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2575 4875decca2110aec5729b4d4648b8174 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 2.7E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1655 9b51b37684e389d39752239017a8f6a5 421 Pfam PF02447 GntP family permease 9 414 2.9E-23 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VV1_1074 32ad0c0c469ff1f5ae4a70d3d9e3a31a 177 Pfam PF13358 DDE superfamily endonuclease 7 145 1.9E-27 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VV1_1074 32ad0c0c469ff1f5ae4a70d3d9e3a31a 177 Gene3D G3DSA:3.30.420.470 4 172 6.0E-12 T 14-10-2018 VV2_0552 919486dc689088846610478046eb740b 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VV2_0552 919486dc689088846610478046eb740b 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.8E-101 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VV2_0552 919486dc689088846610478046eb740b 316 Gene3D G3DSA:3.20.20.70 2 316 2.5E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0552 919486dc689088846610478046eb740b 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VV2_0552 919486dc689088846610478046eb740b 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 2.9E-154 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VV2_0552 919486dc689088846610478046eb740b 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.955 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VV2_0552 919486dc689088846610478046eb740b 316 SUPERFAMILY SSF51569 1 315 3.04E-114 T 14-10-2018 VV2_1431 1edb35c40f6b08d3f3a9ecbd65be5fac 147 SUPERFAMILY SSF46689 2 74 1.69E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1431 1edb35c40f6b08d3f3a9ecbd65be5fac 147 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1431 1edb35c40f6b08d3f3a9ecbd65be5fac 147 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1431 1edb35c40f6b08d3f3a9ecbd65be5fac 147 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1431 1edb35c40f6b08d3f3a9ecbd65be5fac 147 Gene3D G3DSA:1.10.357.10 1 144 3.6E-34 T 14-10-2018 VV1_2349 8cc489bacd1318fd7b519b32defc39f1 314 Pfam PF00561 alpha/beta hydrolase fold 37 138 2.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_2349 8cc489bacd1318fd7b519b32defc39f1 314 SUPERFAMILY SSF53474 32 310 5.05E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2349 8cc489bacd1318fd7b519b32defc39f1 314 Gene3D G3DSA:3.40.50.1820 32 313 2.8E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2114 b90f72f94c5a55f378bdace5dc48ea14 315 Gene3D G3DSA:2.40.160.10 11 315 1.2E-9 T 14-10-2018 IPR023614 Porin domain superfamily VV1_2114 b90f72f94c5a55f378bdace5dc48ea14 315 Pfam PF13609 Gram-negative porin 7 287 3.0E-18 T 14-10-2018 VV1_2114 b90f72f94c5a55f378bdace5dc48ea14 315 SUPERFAMILY SSF56935 30 315 5.23E-22 T 14-10-2018 VV2_1345 baf50d1541d364f79241ca93d10ad64b 113 SUPERFAMILY SSF51197 4 101 1.24E-32 T 14-10-2018 VV2_1345 baf50d1541d364f79241ca93d10ad64b 113 Gene3D G3DSA:2.60.120.10 1 113 2.6E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1345 baf50d1541d364f79241ca93d10ad64b 113 PIRSF PIRSF020632 3 112 2.8E-66 T 14-10-2018 IPR014510 Tellurite resistance predicted, YeaR VV2_1345 baf50d1541d364f79241ca93d10ad64b 113 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 2.4E-27 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 VV2_0842 c0612e04008ebfac65e7a2370df639a9 302 Pfam PF01497 Periplasmic binding protein 41 275 1.3E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain VV2_0842 c0612e04008ebfac65e7a2370df639a9 302 Gene3D G3DSA:3.40.50.1980 171 274 4.8E-89 T 14-10-2018 VV2_0842 c0612e04008ebfac65e7a2370df639a9 302 Gene3D G3DSA:3.40.50.1980 25 280 4.8E-89 T 14-10-2018 VV2_0842 c0612e04008ebfac65e7a2370df639a9 302 SUPERFAMILY SSF53807 23 281 4.71E-60 T 14-10-2018 VV1_1058 6aaaa8a2495e38bd195611c9dc1a6108 87 Gene3D G3DSA:3.30.160.140 1 87 1.8E-32 T 14-10-2018 IPR036692 Shew3726-like superfamily VV1_1058 6aaaa8a2495e38bd195611c9dc1a6108 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 3.3E-25 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 VV1_1058 6aaaa8a2495e38bd195611c9dc1a6108 87 SUPERFAMILY SSF160272 1 86 1.31E-28 T 14-10-2018 IPR036692 Shew3726-like superfamily VV2_0501 70ea54ce9e44324a231e6a952a05593f 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 1.5E-6 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV2_0501 70ea54ce9e44324a231e6a952a05593f 185 SUPERFAMILY SSF52833 2 184 3.81E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0501 70ea54ce9e44324a231e6a952a05593f 185 Gene3D G3DSA:3.40.30.10 1 184 6.8E-61 T 14-10-2018 VV2_0501 70ea54ce9e44324a231e6a952a05593f 185 PIRSF PIRSF000239 1 185 4.7E-52 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV2_0501 70ea54ce9e44324a231e6a952a05593f 185 Pfam PF00578 AhpC/TSA family 7 131 1.4E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VV2_0501 70ea54ce9e44324a231e6a952a05593f 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 4.2E-104 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV1_0314 4b75da2df93bee7741c5904d3fd4d4fc 298 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 217 229 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VV1_0314 4b75da2df93bee7741c5904d3fd4d4fc 298 Pfam PF00348 Polyprenyl synthetase 32 274 1.9E-59 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VV1_0314 4b75da2df93bee7741c5904d3fd4d4fc 298 SUPERFAMILY SSF48576 4 291 1.26E-87 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VV1_0314 4b75da2df93bee7741c5904d3fd4d4fc 298 Gene3D G3DSA:1.10.600.10 2 298 2.0E-114 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily VV1_0314 4b75da2df93bee7741c5904d3fd4d4fc 298 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 99 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 166 187 7.1E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 54 70 7.1E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 35 54 7.1E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 268 294 7.1E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 418 435 7.1E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 142 166 7.1E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PRINTS PR01806 Virulence factor MviN signature 366 385 7.1E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 Pfam PF03023 MviN-like protein 30 475 6.8E-141 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 512 9.8E-134 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.636 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV1_0509 8443436d5a92da9e48f5475b815c0ee0 520 PIRSF PIRSF002869 1 518 2.9E-151 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VV2_0452 55f239d0ae5b17694393dd79621da961 114 Gene3D G3DSA:3.20.160.10 1 114 2.4E-51 T 14-10-2018 IPR038604 Type III effector HopJ superfamily VV2_0452 55f239d0ae5b17694393dd79621da961 114 Pfam PF08888 HopJ type III effector protein 4 111 3.1E-50 T 14-10-2018 IPR014984 HopJ type III effector protein VV2_1298 82b71e8802d52dad7e6c1ab4437689cc 615 SUPERFAMILY SSF51445 85 404 5.66E-43 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1298 82b71e8802d52dad7e6c1ab4437689cc 615 SUPERFAMILY SSF49785 456 615 2.3E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1298 82b71e8802d52dad7e6c1ab4437689cc 615 Gene3D G3DSA:2.60.120.430 472 606 4.2E-16 T 14-10-2018 VV2_1298 82b71e8802d52dad7e6c1ab4437689cc 615 Gene3D G3DSA:3.20.20.80 76 410 1.9E-11 T 14-10-2018 VV2_1197 f16bbc18773d4ff2f053ae6350cc89aa 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 24.207 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VV2_1197 f16bbc18773d4ff2f053ae6350cc89aa 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 407 7.4E-137 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VV2_1197 f16bbc18773d4ff2f053ae6350cc89aa 408 Pfam PF03616 Sodium/glutamate symporter 6 376 1.4E-154 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VV1_0221 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.7E-115 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VV1_0221 982f589fee58374ffa26f77c1b2896f3 262 SUPERFAMILY SSF117143 93 223 5.75E-33 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VV1_0221 982f589fee58374ffa26f77c1b2896f3 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VV1_0221 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.9E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VV1_0221 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.7E-38 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VV1_0221 982f589fee58374ffa26f77c1b2896f3 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.1E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VV1_0221 982f589fee58374ffa26f77c1b2896f3 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.5E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV2_0847 e44e983a81632dec3cc7e63dc8df587f 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 139 1.0E-28 T 14-10-2018 VV2_0847 e44e983a81632dec3cc7e63dc8df587f 142 SUPERFAMILY SSF50630 6 140 2.34E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VV2_0847 e44e983a81632dec3cc7e63dc8df587f 142 Gene3D G3DSA:2.40.70.10 3 133 8.3E-30 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily VV1_0657 10e0c337f49f4c9703df62fc203e25c8 200 SUPERFAMILY SSF52016 1 193 9.81E-60 T 14-10-2018 VV1_0657 10e0c337f49f4c9703df62fc203e25c8 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.709 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VV1_0657 10e0c337f49f4c9703df62fc203e25c8 200 Gene3D G3DSA:3.20.19.10 1 180 6.3E-77 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VV1_0657 10e0c337f49f4c9703df62fc203e25c8 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.5E-96 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VV1_0657 10e0c337f49f4c9703df62fc203e25c8 200 Pfam PF00694 Aconitase C-terminal domain 1 125 2.3E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VV1_0942 c174b0cc0e0f70b746bcadb40a74bcc4 104 Pfam PF12305 Protein of unknown function (DUF3630) 8 100 6.0E-37 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 VV1_2329 33d09d45d54795aa2019291cd948c516 143 Pfam PF01478 Type IV leader peptidase family 10 109 2.0E-8 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VV2_1618 39ef1ad304b746203f4ccdc115ddca98 177 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 3.0E-47 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VV2_1618 39ef1ad304b746203f4ccdc115ddca98 177 SUPERFAMILY SSF89028 7 169 2.75E-35 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VV2_1618 39ef1ad304b746203f4ccdc115ddca98 177 Pfam PF01923 Cobalamin adenosyltransferase 20 156 4.9E-14 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VV2_1618 39ef1ad304b746203f4ccdc115ddca98 177 Gene3D G3DSA:1.20.1200.10 17 173 5.9E-22 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VV2_0380 643566b50431ed29f526815f55704afe 245 Pfam PF01614 Bacterial transcriptional regulator 131 239 1.5E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal VV2_0380 643566b50431ed29f526815f55704afe 245 Gene3D G3DSA:1.10.10.10 10 80 4.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0380 643566b50431ed29f526815f55704afe 245 Pfam PF09339 IclR helix-turn-helix domain 14 61 1.2E-5 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VV2_0380 643566b50431ed29f526815f55704afe 245 SUPERFAMILY SSF55781 81 240 3.2E-32 T 14-10-2018 VV2_0380 643566b50431ed29f526815f55704afe 245 SUPERFAMILY SSF46785 7 66 7.31E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0380 643566b50431ed29f526815f55704afe 245 Gene3D G3DSA:3.30.450.40 81 241 6.3E-59 T 14-10-2018 IPR029016 GAF-like domain superfamily VV2_1563 a4e58bc18d045c2609fb91e4a47c7e49 323 Gene3D G3DSA:3.40.50.410 84 286 7.6E-62 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_1563 a4e58bc18d045c2609fb91e4a47c7e49 323 SUPERFAMILY SSF53300 85 282 1.63E-39 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_1563 a4e58bc18d045c2609fb91e4a47c7e49 323 SMART SM00327 85 286 1.9E-21 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_1563 a4e58bc18d045c2609fb91e4a47c7e49 323 Pfam PF00092 von Willebrand factor type A domain 87 279 3.3E-34 T 14-10-2018 IPR002035 von Willebrand factor, type A VV1_2766 084ad18e8dd0818642c8ee236ac466ec 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 1.6E-40 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VV1_2766 084ad18e8dd0818642c8ee236ac466ec 339 Gene3D G3DSA:3.90.850.10 1 339 2.0E-138 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VV1_2766 084ad18e8dd0818642c8ee236ac466ec 339 SUPERFAMILY SSF56529 77 333 4.06E-56 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VV2_0883 66bc7121b8711b70da2763314dc416d9 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 257 7.2E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV2_0883 66bc7121b8711b70da2763314dc416d9 343 Gene3D G3DSA:1.10.287.470 97 186 6.9E-27 T 14-10-2018 VV2_0883 66bc7121b8711b70da2763314dc416d9 343 Gene3D G3DSA:2.40.50.100 65 216 6.9E-27 T 14-10-2018 VV2_0883 66bc7121b8711b70da2763314dc416d9 343 Gene3D G3DSA:2.40.30.170 218 262 6.9E-27 T 14-10-2018 VV2_0883 66bc7121b8711b70da2763314dc416d9 343 SUPERFAMILY SSF111369 66 216 7.32E-9 T 14-10-2018 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 5.8E-108 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.615 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Gene3D G3DSA:3.40.50.620 5 333 1.4E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 SUPERFAMILY SSF52374 5 334 1.13E-91 T 14-10-2018 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Gene3D G3DSA:1.10.240.10 191 304 1.4E-139 T 14-10-2018 VV1_1307 3e2a0bbe80dc0a0c6b7592f9a3080638 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 2.8E-76 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VV1_1516 3f958e840f5b3933de3b1a325c2a1650 239 Gene3D G3DSA:3.40.50.150 29 239 7.7E-70 T 14-10-2018 VV1_1516 3f958e840f5b3933de3b1a325c2a1650 239 SUPERFAMILY SSF53335 16 237 4.03E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1516 3f958e840f5b3933de3b1a325c2a1650 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 7.4E-68 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VV1_1516 3f958e840f5b3933de3b1a325c2a1650 239 Pfam PF02390 Putative methyltransferase 62 232 7.1E-58 T 14-10-2018 VV1_1516 3f958e840f5b3933de3b1a325c2a1650 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.828 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VV1_0867 098e34ce34f358d2be569ced366ce466 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 5.3E-58 T 14-10-2018 IPR022792 Type II secretion system, protein N VV2_0241 c2779d25e2fd07240019de3fd8889f16 298 SUPERFAMILY SSF103481 194 291 2.48E-14 T 14-10-2018 VV2_0241 c2779d25e2fd07240019de3fd8889f16 298 Pfam PF00892 EamA-like transporter family 161 287 4.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0241 c2779d25e2fd07240019de3fd8889f16 298 Pfam PF00892 EamA-like transporter family 12 142 6.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0241 c2779d25e2fd07240019de3fd8889f16 298 SUPERFAMILY SSF103481 47 145 8.63E-17 T 14-10-2018 VV1_2936 e1283aca938dd9771f8c43e95ba6687a 139 SUPERFAMILY SSF54427 8 125 3.09E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily VV1_2936 e1283aca938dd9771f8c43e95ba6687a 139 Pfam PF12680 SnoaL-like domain 8 108 3.0E-13 T 14-10-2018 IPR037401 SnoaL-like domain VV1_2936 e1283aca938dd9771f8c43e95ba6687a 139 Gene3D G3DSA:3.10.450.50 6 124 3.3E-24 T 14-10-2018 VV1_2133 9383b50acb6b5d9ccd04544eec013073 264 Pfam PF00561 alpha/beta hydrolase fold 19 121 6.1E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_2133 9383b50acb6b5d9ccd04544eec013073 264 SUPERFAMILY SSF53474 12 261 9.49E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2133 9383b50acb6b5d9ccd04544eec013073 264 PRINTS PR00412 Epoxide hydrolase signature 237 259 3.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VV1_2133 9383b50acb6b5d9ccd04544eec013073 264 PRINTS PR00412 Epoxide hydrolase signature 205 221 3.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VV1_2133 9383b50acb6b5d9ccd04544eec013073 264 PRINTS PR00412 Epoxide hydrolase signature 24 42 3.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VV1_2133 9383b50acb6b5d9ccd04544eec013073 264 Gene3D G3DSA:3.40.50.1820 7 262 8.5E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_1574 47457e68ac8650616e38c34e198ac9c5 107 Pfam PF04892 VanZ like family 35 95 5.0E-9 T 14-10-2018 IPR006976 VanZ-like VV1_0979 cf1f9ce510d4125e650277372e9016bc 485 Pfam PF02386 Cation transport protein 39 477 3.7E-91 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VV1_0979 cf1f9ce510d4125e650277372e9016bc 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 468 1.9E-116 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VV1_0979 cf1f9ce510d4125e650277372e9016bc 485 PIRSF PIRSF006247 1 485 1.7E-177 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VV2_1408 92813bd78b59927ce1fccc85028eaaad 673 SUPERFAMILY SSF51011 449 524 2.56E-7 T 14-10-2018 VV2_1408 92813bd78b59927ce1fccc85028eaaad 673 Pfam PF00128 Alpha amylase, catalytic domain 195 380 2.4E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1408 92813bd78b59927ce1fccc85028eaaad 673 Pfam PF00128 Alpha amylase, catalytic domain 78 165 4.0E-27 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1408 92813bd78b59927ce1fccc85028eaaad 673 Gene3D G3DSA:3.20.20.80 42 441 3.8E-69 T 14-10-2018 VV2_1408 92813bd78b59927ce1fccc85028eaaad 673 Gene3D G3DSA:2.60.40.1180 442 523 6.8E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta VV2_1408 92813bd78b59927ce1fccc85028eaaad 673 SMART SM00642 52 436 9.7E-32 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1408 92813bd78b59927ce1fccc85028eaaad 673 SUPERFAMILY SSF51445 41 446 1.56E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1580 013f7ca190ea2065f8018a1341d0d187 163 SUPERFAMILY SSF142984 89 125 8.89E-5 T 14-10-2018 VV2_1580 013f7ca190ea2065f8018a1341d0d187 163 Pfam PF10531 SLBB domain 91 138 7.4E-16 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV2_1580 013f7ca190ea2065f8018a1341d0d187 163 Gene3D G3DSA:3.10.560.10 5 158 5.8E-27 T 14-10-2018 VV2_1580 013f7ca190ea2065f8018a1341d0d187 163 Gene3D G3DSA:3.30.1950.10 17 89 5.8E-27 T 14-10-2018 VV2_1580 013f7ca190ea2065f8018a1341d0d187 163 Pfam PF02563 Polysaccharide biosynthesis/export protein 10 85 9.9E-20 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VV1_1908 046a27f3b3bff8ef241e1b3eaf3138b2 80 SUPERFAMILY SSF64307 4 74 6.02E-14 T 14-10-2018 IPR036868 TusA-like domain superfamily VV1_1908 046a27f3b3bff8ef241e1b3eaf3138b2 80 Gene3D G3DSA:3.30.110.40 1 73 5.6E-10 T 14-10-2018 IPR036868 TusA-like domain superfamily VV1_1908 046a27f3b3bff8ef241e1b3eaf3138b2 80 Pfam PF01206 Sulfurtransferase TusA 4 70 5.5E-13 T 14-10-2018 IPR001455 TusA-like domain VV1_2829 44c3c7d4eeaea74a03edfd9a4e15af35 400 Gene3D G3DSA:3.40.50.720 1 399 5.6E-181 T 14-10-2018 VV1_2829 44c3c7d4eeaea74a03edfd9a4e15af35 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.912 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_2829 44c3c7d4eeaea74a03edfd9a4e15af35 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.6E-112 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_2829 44c3c7d4eeaea74a03edfd9a4e15af35 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.1E-31 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_2829 44c3c7d4eeaea74a03edfd9a4e15af35 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.3E-37 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_1853 ef675287e397c365e90208e63393779d 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 3.6E-138 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 VV1_0144 b8e4ebbfc160eea255179833f6c04560 198 Gene3D G3DSA:3.10.180.10 6 198 6.0E-65 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_0144 b8e4ebbfc160eea255179833f6c04560 198 SUPERFAMILY SSF54593 3 197 2.81E-70 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_0144 b8e4ebbfc160eea255179833f6c04560 198 Pfam PF06185 YecM protein 12 196 8.3E-71 T 14-10-2018 IPR010393 Protein of unknown function DUF991 VV1_0511 02f35510c1918f3841e4ed957ba17894 86 SUPERFAMILY SSF46992 3 86 2.62E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0511 02f35510c1918f3841e4ed957ba17894 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-36 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0511 02f35510c1918f3841e4ed957ba17894 86 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0511 02f35510c1918f3841e4ed957ba17894 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.607 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0511 02f35510c1918f3841e4ed957ba17894 86 Gene3D G3DSA:1.20.58.110 1 86 1.3E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0511 02f35510c1918f3841e4ed957ba17894 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 8.3E-32 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 Gene3D G3DSA:1.10.275.10 16 152 9.4E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 Gene3D G3DSA:1.10.40.30 421 470 4.3E-29 T 14-10-2018 VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 2.3E-254 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 Gene3D G3DSA:1.20.200.10 153 420 1.6E-112 T 14-10-2018 VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 Pfam PF10415 Fumarase C C-terminus 421 473 3.9E-17 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.8E-25 T 14-10-2018 IPR000362 Fumarate lyase family VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 Pfam PF00206 Lyase 23 355 9.5E-102 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal VV1_1249 36ddcc376e7b466db62213d7ce1d7e56 483 SUPERFAMILY SSF48557 14 467 6.77E-143 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 Pfam PF12833 Helix-turn-helix domain 165 239 1.4E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 SUPERFAMILY SSF46689 140 188 9.86E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 Gene3D G3DSA:1.10.10.60 188 241 4.6E-20 T 14-10-2018 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 SMART SM00342 155 239 1.8E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 4.4E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 4.4E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 192 235 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 SUPERFAMILY SSF46689 192 239 1.84E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1743 cafc0a948ef51dda7366f3d5174d6739 242 Gene3D G3DSA:1.10.10.60 135 187 1.6E-9 T 14-10-2018 VV1_0839 9d2f6a2c5618d540e00185f8ff932fc4 609 SUPERFAMILY SSF53850 42 558 1.07E-91 T 14-10-2018 VV1_0839 9d2f6a2c5618d540e00185f8ff932fc4 609 Gene3D G3DSA:3.40.190.10 15 316 7.7E-40 T 14-10-2018 VV1_0839 9d2f6a2c5618d540e00185f8ff932fc4 609 PIRSF PIRSF002741 1 565 3.2E-64 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VV1_0839 9d2f6a2c5618d540e00185f8ff932fc4 609 Gene3D G3DSA:3.10.105.10 317 543 4.9E-42 T 14-10-2018 VV1_0839 9d2f6a2c5618d540e00185f8ff932fc4 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 485 1.1E-57 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain VV1_2699 785f697bcd6a26a41eee736eae8f9239 252 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.7E-42 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VV1_2699 785f697bcd6a26a41eee736eae8f9239 252 Pfam PF01553 Acyltransferase 56 180 3.6E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_2699 785f697bcd6a26a41eee736eae8f9239 252 SUPERFAMILY SSF69593 4 242 3.01E-59 T 14-10-2018 VV1_2699 785f697bcd6a26a41eee736eae8f9239 252 SMART SM00563 67 182 4.4E-40 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_1571 cd37187c33056bad245c8814a1e4ec77 137 SUPERFAMILY SSF53850 14 125 3.26E-8 T 14-10-2018 VV2_0583 6e4f75d6b119eb7da2112f2fe5310cf1 201 Pfam PF00462 Glutaredoxin 109 174 2.3E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV2_0583 6e4f75d6b119eb7da2112f2fe5310cf1 201 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VV2_0583 6e4f75d6b119eb7da2112f2fe5310cf1 201 Gene3D G3DSA:3.40.30.10 109 185 3.1E-19 T 14-10-2018 VV2_0583 6e4f75d6b119eb7da2112f2fe5310cf1 201 PRINTS PR00160 Glutaredoxin signature 157 170 6.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV2_0583 6e4f75d6b119eb7da2112f2fe5310cf1 201 PRINTS PR00160 Glutaredoxin signature 171 184 6.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV2_0583 6e4f75d6b119eb7da2112f2fe5310cf1 201 PRINTS PR00160 Glutaredoxin signature 108 126 6.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup VV2_0583 6e4f75d6b119eb7da2112f2fe5310cf1 201 SUPERFAMILY SSF52833 109 189 3.21E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1301 85de72771cab3f5bfc5942844fd2a630 427 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 62 408 0.0 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1301 85de72771cab3f5bfc5942844fd2a630 427 Pfam PF02264 LamB porin 33 427 4.1E-84 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1301 85de72771cab3f5bfc5942844fd2a630 427 Gene3D G3DSA:2.40.170.10 31 427 6.7E-67 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VV2_1301 85de72771cab3f5bfc5942844fd2a630 427 SUPERFAMILY SSF56935 31 427 3.75E-87 T 14-10-2018 VV2_1183 aaf2a0fabdb1a18cfdb53b3f3e9ef693 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 6.0E-35 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 VV1_2537 45ad2bb75e0fb747890a68826b362c8b 165 SUPERFAMILY SSF55729 12 147 3.85E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2537 45ad2bb75e0fb747890a68826b362c8b 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 151 1.0E-9 T 14-10-2018 IPR000182 GNAT domain VV1_2537 45ad2bb75e0fb747890a68826b362c8b 165 Gene3D G3DSA:3.40.630.30 1 159 1.9E-44 T 14-10-2018 VV2_1400 8e91bf9ebc3c575ad9f0748f96adf888 615 SUPERFAMILY SSF55486 3 551 4.4E-74 T 14-10-2018 VV2_1400 8e91bf9ebc3c575ad9f0748f96adf888 615 Gene3D G3DSA:1.10.1370.30 28 311 4.6E-8 T 14-10-2018 VV2_1400 8e91bf9ebc3c575ad9f0748f96adf888 615 Gene3D G3DSA:1.10.1370.20 317 501 6.9E-9 T 14-10-2018 VV2_1400 8e91bf9ebc3c575ad9f0748f96adf888 615 Pfam PF01432 Peptidase family M3 284 549 2.8E-16 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Gene3D G3DSA:3.10.560.10 288 377 1.2E-17 T 14-10-2018 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Gene3D G3DSA:3.10.560.10 481 575 3.8E-18 T 14-10-2018 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Gene3D G3DSA:3.10.560.10 577 670 3.5E-18 T 14-10-2018 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Gene3D G3DSA:3.10.560.10 199 287 1.0E-15 T 14-10-2018 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Gene3D G3DSA:3.10.560.10 386 473 4.8E-13 T 14-10-2018 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 96 7.7E-12 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Gene3D G3DSA:3.10.560.10 101 181 2.3E-15 T 14-10-2018 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Pfam PF10531 SLBB domain 395 445 5.4E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Pfam PF10531 SLBB domain 299 351 6.0E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Pfam PF10531 SLBB domain 494 537 8.1E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Pfam PF10531 SLBB domain 211 252 5.8E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Pfam PF10531 SLBB domain 104 148 1.1E-4 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Pfam PF10531 SLBB domain 589 632 1.4E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VV1_2660 b70358aab899b2fbc0ede286562badd3 699 Gene3D G3DSA:3.30.1950.10 45 100 2.3E-15 T 14-10-2018 VV2_0015 f47088d2f741efe26411cbc57c4e4fc8 330 SUPERFAMILY SSF52317 1 158 9.15E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV2_0015 f47088d2f741efe26411cbc57c4e4fc8 330 Gene3D G3DSA:3.50.30.60 165 330 5.1E-47 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VV2_0015 f47088d2f741efe26411cbc57c4e4fc8 330 PIRSF PIRSF028757 1 330 6.9E-87 T 14-10-2018 IPR003507 Peptidase family S66 VV2_0015 f47088d2f741efe26411cbc57c4e4fc8 330 Gene3D G3DSA:3.40.50.10740 1 163 9.6E-61 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal VV2_0015 f47088d2f741efe26411cbc57c4e4fc8 330 SUPERFAMILY SSF141986 173 324 9.29E-39 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily VV2_0015 f47088d2f741efe26411cbc57c4e4fc8 330 Pfam PF02016 LD-carboxypeptidase 13 318 4.1E-71 T 14-10-2018 IPR003507 Peptidase family S66 VV2_0659 f995aef33967804a4267fcaadef16162 697 Gene3D G3DSA:3.40.50.300 182 578 8.2E-131 T 14-10-2018 VV2_0659 f995aef33967804a4267fcaadef16162 697 Pfam PF12615 F sex factor protein N terminal 37 130 1.4E-12 T 14-10-2018 IPR022585 TraD coupling protein, N-terminal VV2_0659 f995aef33967804a4267fcaadef16162 697 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 192 577 6.9E-139 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain VV2_0659 f995aef33967804a4267fcaadef16162 697 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 12 593 2.0E-250 T 14-10-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 VV2_0659 f995aef33967804a4267fcaadef16162 697 SUPERFAMILY SSF52540 184 589 2.83E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0659 f995aef33967804a4267fcaadef16162 697 Gene3D G3DSA:1.10.8.80 261 379 8.2E-131 T 14-10-2018 VV1_0153 029bf0d369e0de9e3c3e86f5aadb25e1 265 Pfam PF00950 ABC 3 transport family 5 259 3.9E-75 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VV1_0153 029bf0d369e0de9e3c3e86f5aadb25e1 265 SUPERFAMILY SSF81345 3 260 5.1E-40 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV1_0153 029bf0d369e0de9e3c3e86f5aadb25e1 265 Gene3D G3DSA:1.10.3470.10 34 263 2.2E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like VV1_1991 0b7c4fe9e4c407106f682480e5e10430 1951 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 71 142 1.4E-26 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal VV1_1991 0b7c4fe9e4c407106f682480e5e10430 1951 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1906 1946 2.5E-15 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal VV1_1991 0b7c4fe9e4c407106f682480e5e10430 1951 Gene3D G3DSA:1.20.58.2200 1887 1948 2.7E-13 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily VV2_1279 10ebdcdd3a5dec87d5cb282acff0b2ee 363 Gene3D G3DSA:3.30.70.270 210 363 2.1E-38 T 14-10-2018 VV2_1279 10ebdcdd3a5dec87d5cb282acff0b2ee 363 SUPERFAMILY SSF55073 219 361 7.77E-37 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_1279 10ebdcdd3a5dec87d5cb282acff0b2ee 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 360 8.5E-35 T 14-10-2018 IPR000160 GGDEF domain VV2_1279 10ebdcdd3a5dec87d5cb282acff0b2ee 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 212 360 9.4E-31 T 14-10-2018 IPR000160 GGDEF domain VV2_1279 10ebdcdd3a5dec87d5cb282acff0b2ee 363 SMART SM00267 202 363 7.9E-32 T 14-10-2018 IPR000160 GGDEF domain VV1_0961 998f800da9053a7070d3db89a5715219 69 Pfam PF02597 ThiS family 7 69 1.6E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VV1_0961 998f800da9053a7070d3db89a5715219 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 2.1E-20 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis VV1_0961 998f800da9053a7070d3db89a5715219 69 SUPERFAMILY SSF54285 5 69 3.78E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VV1_0961 998f800da9053a7070d3db89a5715219 69 Gene3D G3DSA:3.10.20.30 4 69 2.2E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily VV1_2562 a1ba19a25ed38a5607cf4d66fe3b391d 288 SUPERFAMILY SSF56112 4 278 1.02E-40 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV1_2562 a1ba19a25ed38a5607cf4d66fe3b391d 288 PIRSF PIRSF006221 1 288 1.6E-108 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VV1_2562 a1ba19a25ed38a5607cf4d66fe3b391d 288 Gene3D G3DSA:3.90.1200.10 97 288 7.8E-63 T 14-10-2018 VV1_2562 a1ba19a25ed38a5607cf4d66fe3b391d 288 Pfam PF03881 Fructosamine kinase 1 287 3.7E-123 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VV1_2562 a1ba19a25ed38a5607cf4d66fe3b391d 288 Gene3D G3DSA:3.30.200.20 1 93 1.7E-21 T 14-10-2018 VV2_0456 908984842cb0ed32f7ca4708ad14c9ed 658 Gene3D G3DSA:3.30.300.30 532 657 8.5E-15 T 14-10-2018 VV2_0456 908984842cb0ed32f7ca4708ad14c9ed 658 SUPERFAMILY SSF56801 33 650 6.54E-123 T 14-10-2018 VV2_0456 908984842cb0ed32f7ca4708ad14c9ed 658 Gene3D G3DSA:3.40.50.12780 79 528 7.0E-57 T 14-10-2018 VV2_0456 908984842cb0ed32f7ca4708ad14c9ed 658 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 650 4.7E-242 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VV2_0456 908984842cb0ed32f7ca4708ad14c9ed 658 Pfam PF00501 AMP-binding enzyme 103 532 2.4E-47 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV2_0456 908984842cb0ed32f7ca4708ad14c9ed 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 14-10-2018 IPR020845 AMP-binding, conserved site VV2_1292 b52e2011510a1a311c35353b187ad6ce 324 Gene3D G3DSA:1.10.3720.10 89 316 8.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1292 b52e2011510a1a311c35353b187ad6ce 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 323 5.3E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1292 b52e2011510a1a311c35353b187ad6ce 324 SUPERFAMILY SSF161098 93 311 4.41E-15 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0461 7193a0fa9f28df81e436076d753aa586 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 2.0E-122 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VV1_0461 7193a0fa9f28df81e436076d753aa586 272 Gene3D G3DSA:3.40.50.300 21 269 1.1E-64 T 14-10-2018 VV1_0461 7193a0fa9f28df81e436076d753aa586 272 SUPERFAMILY SSF52540 22 258 4.42E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0461 7193a0fa9f28df81e436076d753aa586 272 SMART SM00382 50 247 5.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0461 7193a0fa9f28df81e436076d753aa586 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_0461 7193a0fa9f28df81e436076d753aa586 272 Pfam PF00005 ABC transporter 42 197 6.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1599 0caf6c61a6ea48869cfbd4c4d1987358 276 Gene3D G3DSA:3.40.50.620 1 276 2.4E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV2_1599 0caf6c61a6ea48869cfbd4c4d1987358 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 45.075 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VV2_1599 0caf6c61a6ea48869cfbd4c4d1987358 276 SUPERFAMILY SSF52402 2 276 9.86E-80 T 14-10-2018 VV2_1599 0caf6c61a6ea48869cfbd4c4d1987358 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 3.3E-62 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 VV2_1599 0caf6c61a6ea48869cfbd4c4d1987358 276 Pfam PF02540 NAD synthase 21 270 3.2E-61 T 14-10-2018 IPR022310 NAD/GMP synthase VV2_0055 a6d6b28f338ebcca0574e1c4d1cd80e9 555 Pfam PF12592 Protein of unknown function (DUF3763) 486 537 9.5E-20 T 14-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 VV2_0055 a6d6b28f338ebcca0574e1c4d1cd80e9 555 SMART SM00382 46 189 1.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0055 a6d6b28f338ebcca0574e1c4d1cd80e9 555 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 5.1E-23 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VV2_0055 a6d6b28f338ebcca0574e1c4d1cd80e9 555 Gene3D G3DSA:1.10.8.300 229 301 9.2E-27 T 14-10-2018 VV2_0055 a6d6b28f338ebcca0574e1c4d1cd80e9 555 Gene3D G3DSA:3.40.50.300 8 228 7.2E-59 T 14-10-2018 VV2_0055 a6d6b28f338ebcca0574e1c4d1cd80e9 555 SUPERFAMILY SSF52540 21 303 2.0E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 SUPERFAMILY SSF52540 8 643 2.81E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 9.5E-75 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 Gene3D G3DSA:1.10.486.10 383 539 8.2E-133 T 14-10-2018 VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 Gene3D G3DSA:1.10.10.160 115 188 1.3E-97 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 Gene3D G3DSA:3.40.50.300 282 637 8.2E-133 T 14-10-2018 VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 Gene3D G3DSA:3.40.50.300 11 274 1.3E-97 T 14-10-2018 VV1_0949 585bf8f4221f571fdb84186a0dcdd435 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 4.5E-77 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VV1_1934 14957a5da33ee8fbf1fcd77d4bfd4d61 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 2.7E-20 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV1_1934 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 103 3.8E-30 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV1_1934 14957a5da33ee8fbf1fcd77d4bfd4d61 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.986 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV1_1934 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.9E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV1_1934 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.9E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV1_1934 14957a5da33ee8fbf1fcd77d4bfd4d61 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.9E-13 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VV1_2052 b5a40371c005d44e986068ce87c3e0a5 252 Pfam PF01769 Divalent cation transporter 120 239 1.6E-27 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VV1_2052 b5a40371c005d44e986068ce87c3e0a5 252 Gene3D G3DSA:1.10.357.20 71 247 7.1E-55 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VV1_2052 b5a40371c005d44e986068ce87c3e0a5 252 SUPERFAMILY SSF161093 78 246 3.79E-48 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VV1_2965 c300f91c11e53b1fff59aa377ee4d5f9 364 Pfam PF07433 Protein of unknown function (DUF1513) 71 362 1.8E-113 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VV1_2965 c300f91c11e53b1fff59aa377ee4d5f9 364 PIRSF PIRSF028101 4 364 5.9E-169 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VV1_2965 c300f91c11e53b1fff59aa377ee4d5f9 364 SUPERFAMILY SSF50969 64 318 1.02E-9 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VV2_0049 d5897b4a63b9cea453326801b2ee11d9 332 PIRSF PIRSF039012 5 332 1.5E-101 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VV2_0049 d5897b4a63b9cea453326801b2ee11d9 332 Gene3D G3DSA:3.40.630.10 13 330 5.2E-70 T 14-10-2018 VV2_0049 d5897b4a63b9cea453326801b2ee11d9 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 328 4.7E-75 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VV2_0049 d5897b4a63b9cea453326801b2ee11d9 332 SUPERFAMILY SSF53187 38 330 3.77E-51 T 14-10-2018 VV2_0174 632de961d4ac4f4890dfd49301ca82be 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 93 7.8E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV2_0174 632de961d4ac4f4890dfd49301ca82be 145 SUPERFAMILY SSF69118 5 144 1.7E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VV2_0174 632de961d4ac4f4890dfd49301ca82be 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 9.0E-16 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VV2_0174 632de961d4ac4f4890dfd49301ca82be 145 Gene3D G3DSA:1.20.1290.10 1 145 5.0E-44 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VV1_2859 07cc948d863d5b5bbf13d461247639ed 381 Pfam PF13416 Bacterial extracellular solute-binding protein 59 331 1.0E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV1_2859 07cc948d863d5b5bbf13d461247639ed 381 Gene3D G3DSA:3.40.190.10 153 297 5.5E-17 T 14-10-2018 VV1_2859 07cc948d863d5b5bbf13d461247639ed 381 PIRSF PIRSF029172 1 381 8.3E-171 T 14-10-2018 IPR027020 Protein ynjB VV1_2859 07cc948d863d5b5bbf13d461247639ed 381 SUPERFAMILY SSF53850 33 379 1.52E-39 T 14-10-2018 VV1_2859 07cc948d863d5b5bbf13d461247639ed 381 Gene3D G3DSA:3.40.190.10 69 329 5.5E-17 T 14-10-2018 VV1_2471 b319bb3a31daec7690eff56960ad7d3c 174 Pfam PF13527 Acetyltransferase (GNAT) domain 45 127 1.5E-12 T 14-10-2018 VV1_2471 b319bb3a31daec7690eff56960ad7d3c 174 SUPERFAMILY SSF55729 38 160 4.01E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2471 b319bb3a31daec7690eff56960ad7d3c 174 Gene3D G3DSA:3.40.630.30 7 166 9.1E-14 T 14-10-2018 VV2_1522 9235aa7c9977b2b2e704604034e1fc95 115 SUPERFAMILY SSF47413 5 87 7.41E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1522 9235aa7c9977b2b2e704604034e1fc95 115 Gene3D G3DSA:1.10.260.40 2 87 4.3E-10 T 14-10-2018 VV2_0450 48b7f5db7a7c89fda0a9f485782297ac 87 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 17 82 2.9E-28 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VV2_0450 48b7f5db7a7c89fda0a9f485782297ac 87 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 28 82 9.0E-26 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 93 258 3.1E-46 T 14-10-2018 IPR000160 GGDEF domain VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 SUPERFAMILY SSF55073 102 261 3.22E-43 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 SUPERFAMILY SSF141868 274 525 2.35E-79 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 99 252 1.4E-42 T 14-10-2018 IPR000160 GGDEF domain VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 Pfam PF00563 EAL domain 275 513 1.8E-64 T 14-10-2018 IPR001633 EAL domain VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 SMART SM00267 86 258 2.2E-44 T 14-10-2018 IPR000160 GGDEF domain VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 SMART SM00052 269 518 2.2E-85 T 14-10-2018 IPR001633 EAL domain VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 Gene3D G3DSA:3.30.70.270 92 272 5.4E-51 T 14-10-2018 VV2_0453 7192c4502aa6b3815c2099bdf3d17cc6 532 Gene3D G3DSA:3.20.20.450 273 526 2.4E-88 T 14-10-2018 IPR035919 EAL domain superfamily VV1_2821 b7d8e2f3cf551aa32ee884f7ff882f0e 306 Gene3D G3DSA:1.10.3210.10 19 302 2.4E-39 T 14-10-2018 VV1_2821 b7d8e2f3cf551aa32ee884f7ff882f0e 306 Pfam PF08668 HDOD domain 39 235 3.0E-38 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD VV1_2821 b7d8e2f3cf551aa32ee884f7ff882f0e 306 SUPERFAMILY SSF109604 26 301 1.91E-43 T 14-10-2018 VV1_0742 e59cf10e460999beb540b76881ed0a06 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.14 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0742 e59cf10e460999beb540b76881ed0a06 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 4.0E-21 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VV1_0742 e59cf10e460999beb540b76881ed0a06 58 PIRSF PIRSF002211 1 58 8.9E-29 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0742 e59cf10e460999beb540b76881ed0a06 58 SUPERFAMILY SSF55129 1 58 2.75E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VV1_0742 e59cf10e460999beb540b76881ed0a06 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-28 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VV1_0742 e59cf10e460999beb540b76881ed0a06 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 4.5E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0742 e59cf10e460999beb540b76881ed0a06 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site VV2_0442 98657036fc7416e3c1715c2c9ae70151 442 SUPERFAMILY SSF103088 311 427 1.1E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0442 98657036fc7416e3c1715c2c9ae70151 442 Pfam PF09850 Type VI secretion system protein DotU 52 253 2.1E-57 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VV2_0442 98657036fc7416e3c1715c2c9ae70151 442 Gene3D G3DSA:1.25.40.590 48 205 2.0E-48 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VV2_0442 98657036fc7416e3c1715c2c9ae70151 442 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 292 427 2.0E-51 T 14-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain VV2_0442 98657036fc7416e3c1715c2c9ae70151 442 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 50 259 2.2E-68 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU VV2_0442 98657036fc7416e3c1715c2c9ae70151 442 Gene3D G3DSA:3.30.1330.60 280 432 2.7E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV2_0442 98657036fc7416e3c1715c2c9ae70151 442 Pfam PF00691 OmpA family 323 421 5.4E-14 T 14-10-2018 IPR006665 OmpA-like domain VV2_1169 3b890beec2016db7e75acab05ea059cd 119 SMART SM00448 2 115 3.0E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1169 3b890beec2016db7e75acab05ea059cd 119 SUPERFAMILY SSF52172 1 119 2.56E-38 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1169 3b890beec2016db7e75acab05ea059cd 119 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1169 3b890beec2016db7e75acab05ea059cd 119 Gene3D G3DSA:3.40.50.12740 2 119 2.2E-38 T 14-10-2018 VV1_0046 d72e99536af7e1765c248a8970c07376 252 SMART SM00563 86 196 3.7E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV1_0046 d72e99536af7e1765c248a8970c07376 252 SUPERFAMILY SSF69593 50 205 4.58E-24 T 14-10-2018 VV1_0046 d72e99536af7e1765c248a8970c07376 252 Pfam PF01553 Acyltransferase 73 191 3.4E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VV2_0089 263de262d586c7ce8590da91cd383136 421 Pfam PF00437 Type II/IV secretion system protein 71 347 4.7E-80 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV2_0089 263de262d586c7ce8590da91cd383136 421 SUPERFAMILY SSF52540 56 358 4.92E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0089 263de262d586c7ce8590da91cd383136 421 Gene3D G3DSA:3.30.450.380 1 166 2.9E-39 T 14-10-2018 VV2_0089 263de262d586c7ce8590da91cd383136 421 Gene3D G3DSA:3.40.50.300 168 409 6.3E-72 T 14-10-2018 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.10.760.10 209 295 1.9E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.20.58.1490 1 94 7.5E-35 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 238 323 3.58E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 3.4E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 228 6.6E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 322 6.3E-59 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 Gene3D G3DSA:1.10.760.10 143 318 1.9E-73 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 SUPERFAMILY SSF46626 55 238 1.86E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 PIRSF PIRSF000006 1 322 1.5E-109 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 PRINTS PR00605 Class IC cytochrome C signature 206 228 1.6E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 PRINTS PR00605 Class IC cytochrome C signature 164 175 1.6E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VV1_2617 bd354a3df68d4f1679889e83aee1141d 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 2.7E-23 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VV1_2996 c42451dd383c75d3e40717114c7fa422 486 SUPERFAMILY SSF161070 3 476 2.75E-148 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 466 5.6E-77 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 8.2E-41 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2996 c42451dd383c75d3e40717114c7fa422 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.2E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_2454 9387da460a29071a0dc9f87f560ed504 172 Gene3D G3DSA:3.40.630.30 2 149 7.5E-18 T 14-10-2018 VV1_2454 9387da460a29071a0dc9f87f560ed504 172 Pfam PF13302 Acetyltransferase (GNAT) domain 57 148 8.2E-9 T 14-10-2018 IPR000182 GNAT domain VV1_2454 9387da460a29071a0dc9f87f560ed504 172 SUPERFAMILY SSF55729 19 162 4.18E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2683 e82759f3e6d5e55299f78c04caf1db94 244 SUPERFAMILY SSF100950 3 243 5.76E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV1_2683 e82759f3e6d5e55299f78c04caf1db94 244 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 242 1.2E-50 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 VV1_2683 e82759f3e6d5e55299f78c04caf1db94 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 4.0E-59 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VV1_2683 e82759f3e6d5e55299f78c04caf1db94 244 Gene3D G3DSA:3.40.50.1360 1 244 6.0E-86 T 14-10-2018 VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.384 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 Gene3D G3DSA:3.30.230.10 2 165 6.7E-55 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 Pfam PF08544 GHMP kinases C terminal 211 264 4.0E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 SUPERFAMILY SSF55060 167 282 1.34E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 Gene3D G3DSA:3.30.70.890 167 285 1.9E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 PIRSF PIRSF010376 9 285 1.3E-86 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 Pfam PF00288 GHMP kinases N terminal domain 94 150 1.8E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 SUPERFAMILY SSF54211 11 164 3.42E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0256 1ccddfd423904df5e05fa140ce4f4aad 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 284 3.7E-97 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VV1_2717 666277f32edc96ac508f19ca8521ed2b 208 Gene3D G3DSA:3.30.1330.60 63 185 1.3E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2717 666277f32edc96ac508f19ca8521ed2b 208 SUPERFAMILY SSF103088 55 184 2.09E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_2717 666277f32edc96ac508f19ca8521ed2b 208 PRINTS PR01021 OMPA domain signature 131 147 1.4E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2717 666277f32edc96ac508f19ca8521ed2b 208 PRINTS PR01021 OMPA domain signature 86 108 1.4E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2717 666277f32edc96ac508f19ca8521ed2b 208 PRINTS PR01021 OMPA domain signature 116 131 1.4E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VV1_2717 666277f32edc96ac508f19ca8521ed2b 208 Pfam PF00691 OmpA family 85 180 2.1E-17 T 14-10-2018 IPR006665 OmpA-like domain VV1_2294 91003031bf32af6a874d8da36d398607 127 SUPERFAMILY SSF54593 5 124 6.46E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2294 91003031bf32af6a874d8da36d398607 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 3.8E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_2294 91003031bf32af6a874d8da36d398607 127 Gene3D G3DSA:3.10.180.10 8 126 4.6E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_1081 12b97f58fe15d16148a21c82b3332e02 193 SUPERFAMILY SSF46689 6 81 6.98E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1081 12b97f58fe15d16148a21c82b3332e02 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 6.0E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1081 12b97f58fe15d16148a21c82b3332e02 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1081 12b97f58fe15d16148a21c82b3332e02 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV1_1081 12b97f58fe15d16148a21c82b3332e02 193 Gene3D G3DSA:1.10.357.10 1 193 5.2E-69 T 14-10-2018 VV1_1081 12b97f58fe15d16148a21c82b3332e02 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV2_0106 2ec32544425649b8e665863097a247be 151 SUPERFAMILY SSF55811 7 136 2.71E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV2_0106 2ec32544425649b8e665863097a247be 151 Gene3D G3DSA:3.90.79.10 5 137 1.2E-23 T 14-10-2018 VV2_0106 2ec32544425649b8e665863097a247be 151 Pfam PF00293 NUDIX domain 12 126 6.8E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_1834 ce843e1e6844480d0c89fa7675368f04 454 SUPERFAMILY SSF161070 10 453 3.27E-118 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VV1_1834 ce843e1e6844480d0c89fa7675368f04 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.7E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_1834 ce843e1e6844480d0c89fa7675368f04 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.7E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_1834 ce843e1e6844480d0c89fa7675368f04 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.7E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_1834 ce843e1e6844480d0c89fa7675368f04 454 Pfam PF00209 Sodium:neurotransmitter symporter family 156 452 1.1E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_1834 ce843e1e6844480d0c89fa7675368f04 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 138 1.5E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VV1_1821 79b1f22cf054ed2d04f4983851d10e6f 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 4.9E-205 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VV1_1821 79b1f22cf054ed2d04f4983851d10e6f 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 8.6E-115 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VV1_1821 79b1f22cf054ed2d04f4983851d10e6f 446 Pfam PF11973 NQRA C-terminal domain 261 310 5.2E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VV1_1821 79b1f22cf054ed2d04f4983851d10e6f 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.157 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VV2_1021 d2262a6d107f5f4826ee66f02854cfb5 258 Pfam PF03609 PTS system sorbose-specific iic component 5 236 3.2E-72 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 VV2_1016 a7e15f1d24bd6774748b10dd9904d6c0 718 Gene3D G3DSA:2.40.170.20 165 718 2.4E-46 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV2_1016 a7e15f1d24bd6774748b10dd9904d6c0 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 1.3E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV2_1016 a7e15f1d24bd6774748b10dd9904d6c0 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 718 2.1E-83 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VV2_1016 a7e15f1d24bd6774748b10dd9904d6c0 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site VV2_1016 a7e15f1d24bd6774748b10dd9904d6c0 718 Pfam PF00593 TonB dependent receptor 246 717 3.5E-26 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV2_1016 a7e15f1d24bd6774748b10dd9904d6c0 718 SUPERFAMILY SSF56935 35 718 1.17E-85 T 14-10-2018 VV2_1016 a7e15f1d24bd6774748b10dd9904d6c0 718 Gene3D G3DSA:2.170.130.10 30 156 8.7E-21 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VV2_1149 3982919a84338a76737277b5f83e07d7 343 Pfam PF06674 Protein of unknown function (DUF1176) 25 332 6.3E-97 T 14-10-2018 IPR009560 Protein of unknown function DUF1176 VV2_0550 4ff0189a602f86ad16590949b38c7b81 330 Gene3D G3DSA:3.40.50.1360 60 325 7.4E-81 T 14-10-2018 VV2_0550 4ff0189a602f86ad16590949b38c7b81 330 Gene3D G3DSA:1.10.10.60 9 59 2.1E-18 T 14-10-2018 VV2_0550 4ff0189a602f86ad16590949b38c7b81 330 SUPERFAMILY SSF100950 70 320 1.42E-64 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV2_0550 4ff0189a602f86ad16590949b38c7b81 330 Pfam PF04198 Putative sugar-binding domain 66 320 4.2E-77 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 5.5E-6 T 14-10-2018 VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 5.5E-6 T 14-10-2018 VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 5.5E-6 T 14-10-2018 VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 Gene3D G3DSA:3.40.50.720 3 274 2.1E-139 T 14-10-2018 VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 7.2E-56 T 14-10-2018 IPR016040 NAD(P)-binding domain VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 SUPERFAMILY SSF51735 1 337 5.32E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 Gene3D G3DSA:3.90.25.10 194 329 2.1E-139 T 14-10-2018 VV2_1095 410336fdaf2f320c0b514e3b860b5fe8 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 2.6E-137 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VV1_2475 b1de75a0d69d9ff22fe68efc870a471c 176 Gene3D G3DSA:3.40.630.30 1 174 4.0E-37 T 14-10-2018 VV1_2475 b1de75a0d69d9ff22fe68efc870a471c 176 SUPERFAMILY SSF55729 2 173 7.23E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2475 b1de75a0d69d9ff22fe68efc870a471c 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 148 5.2E-21 T 14-10-2018 IPR000182 GNAT domain VV1_0366 e327e8a0744973b8c8f5f3461d663c01 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.852 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VV1_0366 e327e8a0744973b8c8f5f3461d663c01 294 Pfam PF01513 ATP-NAD kinase 8 273 8.2E-69 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VV1_0366 e327e8a0744973b8c8f5f3461d663c01 294 SUPERFAMILY SSF111331 8 290 6.15E-92 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VV1_0366 e327e8a0744973b8c8f5f3461d663c01 294 Gene3D G3DSA:3.40.50.10330 23 289 9.7E-92 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VV1_0366 e327e8a0744973b8c8f5f3461d663c01 294 Gene3D G3DSA:2.60.200.30 129 266 9.7E-92 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VV1_1602 39b9594bf4321e2120294227c1b0693d 376 PIRSF PIRSF015658 1 376 6.1E-176 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VV1_1602 39b9594bf4321e2120294227c1b0693d 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 2.3E-169 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VV1_1602 39b9594bf4321e2120294227c1b0693d 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.0E-156 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VV2_1483 9723668414dd7df9be97a32f9f539224 417 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 146 404 1.4E-17 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VV2_1483 9723668414dd7df9be97a32f9f539224 417 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 146 157 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VV2_1483 9723668414dd7df9be97a32f9f539224 417 SUPERFAMILY SSF52266 145 406 5.83E-21 T 14-10-2018 VV2_1483 9723668414dd7df9be97a32f9f539224 417 Gene3D G3DSA:3.40.50.1110 132 410 5.6E-40 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VV2_0470 a24a30848a69619ed6fc4feca1aad0f4 327 SUPERFAMILY SSF52922 190 323 1.57E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV2_0470 a24a30848a69619ed6fc4feca1aad0f4 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 4.9E-49 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV2_0470 a24a30848a69619ed6fc4feca1aad0f4 327 Gene3D G3DSA:3.40.50.970 1 193 8.5E-75 T 14-10-2018 VV2_0470 a24a30848a69619ed6fc4feca1aad0f4 327 SUPERFAMILY SSF52518 4 191 4.82E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold VV2_0470 a24a30848a69619ed6fc4feca1aad0f4 327 SMART SM00861 4 179 1.5E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VV2_0470 a24a30848a69619ed6fc4feca1aad0f4 327 Gene3D G3DSA:3.40.50.920 198 324 1.7E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VV2_0470 a24a30848a69619ed6fc4feca1aad0f4 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 1.9E-36 T 14-10-2018 IPR033248 Transketolase, C-terminal domain VV2_0095 12aa8b4eb1faabd8b494e6a94793462e 426 SUPERFAMILY SSF53300 148 316 1.63E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_0095 12aa8b4eb1faabd8b494e6a94793462e 426 SMART SM00327 150 418 2.8E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_0095 12aa8b4eb1faabd8b494e6a94793462e 426 Gene3D G3DSA:3.40.50.410 147 412 4.4E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV1_0175 7a64a9d8d04bc5508b2c0936367a40c9 149 SUPERFAMILY SSF46785 5 135 2.05E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0175 7a64a9d8d04bc5508b2c0936367a40c9 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.3E-46 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VV1_0175 7a64a9d8d04bc5508b2c0936367a40c9 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0175 7a64a9d8d04bc5508b2c0936367a40c9 149 Gene3D G3DSA:3.30.1490.190 85 141 1.2E-22 T 14-10-2018 VV1_2522 469497ed59541792728d5bd94a604a4a 251 SMART SM01040 15 114 1.7E-15 T 14-10-2018 IPR003497 BRO N-terminal domain VV1_2522 469497ed59541792728d5bd94a604a4a 251 Pfam PF02498 BRO family, N-terminal domain 16 114 2.9E-9 T 14-10-2018 IPR003497 BRO N-terminal domain VV1_1446 a1b93274d9ce77c661fbcc136f24c1fc 229 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 6.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1446 a1b93274d9ce77c661fbcc136f24c1fc 229 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1446 a1b93274d9ce77c661fbcc136f24c1fc 229 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_0694 a3aee635fc5715708413eb34dcaa9a11 360 Pfam PF01594 AI-2E family transporter 22 349 1.5E-21 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VV1_2712 923435c38d14f84f4214b26df26079c9 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 251 431 3.6E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2712 923435c38d14f84f4214b26df26079c9 467 Gene3D G3DSA:1.10.287.950 139 466 9.3E-63 T 14-10-2018 VV1_2712 923435c38d14f84f4214b26df26079c9 467 SMART SM00283 205 466 4.6E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2712 923435c38d14f84f4214b26df26079c9 467 SUPERFAMILY SSF58104 157 466 1.7E-65 T 14-10-2018 VV2_1170 13e98340b8f0031c3a61a53c884194bb 84 SUPERFAMILY SSF52091 5 81 1.26E-10 T 14-10-2018 IPR036513 STAS domain superfamily VV2_1170 13e98340b8f0031c3a61a53c884194bb 84 Gene3D G3DSA:3.30.750.24 2 83 9.2E-8 T 14-10-2018 IPR036513 STAS domain superfamily VV2_1170 13e98340b8f0031c3a61a53c884194bb 84 Pfam PF13466 STAS domain 6 80 1.1E-10 T 14-10-2018 IPR002645 STAS domain VV1_2591 dc101647141a87488e9be0301aa82baf 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 9.8E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2591 dc101647141a87488e9be0301aa82baf 202 Gene3D G3DSA:3.30.70.20 63 120 8.5E-34 T 14-10-2018 VV1_2591 dc101647141a87488e9be0301aa82baf 202 Gene3D G3DSA:3.30.70.20 5 181 8.5E-34 T 14-10-2018 VV1_2591 dc101647141a87488e9be0301aa82baf 202 SUPERFAMILY SSF54862 1 183 2.72E-48 T 14-10-2018 VV1_2591 dc101647141a87488e9be0301aa82baf 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_3052 32abb384dec0b28f21796fa2cd9b2e32 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 4.6E-54 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VV1_3052 32abb384dec0b28f21796fa2cd9b2e32 185 Gene3D G3DSA:1.20.120.1760 2 181 3.9E-17 T 14-10-2018 VV1_3052 32abb384dec0b28f21796fa2cd9b2e32 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.0E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV1_3052 32abb384dec0b28f21796fa2cd9b2e32 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VV1_3052 32abb384dec0b28f21796fa2cd9b2e32 185 PIRSF PIRSF000847 1 184 2.0E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VV1_0185 741472f24d6a1091f06c943ff02100b4 462 Gene3D G3DSA:1.20.1250.20 1 455 5.3E-130 T 14-10-2018 VV1_0185 741472f24d6a1091f06c943ff02100b4 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 225 438 8.5E-47 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VV1_0185 741472f24d6a1091f06c943ff02100b4 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 9.0E-58 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VV1_0185 741472f24d6a1091f06c943ff02100b4 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VV1_0185 741472f24d6a1091f06c943ff02100b4 462 SUPERFAMILY SSF103473 8 436 3.66E-41 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_0185 741472f24d6a1091f06c943ff02100b4 462 Pfam PF00854 POT family 85 197 1.8E-28 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VV1_0185 741472f24d6a1091f06c943ff02100b4 462 Pfam PF00854 POT family 228 405 4.5E-32 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VV2_0921 99c3f23a9de5a809b7709238ae3b39f8 203 SUPERFAMILY SSF50182 114 180 4.25E-11 T 14-10-2018 IPR010920 LSM domain superfamily VV2_0921 99c3f23a9de5a809b7709238ae3b39f8 203 Pfam PF00924 Mechanosensitive ion channel 77 179 1.0E-9 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV2_0921 99c3f23a9de5a809b7709238ae3b39f8 203 Gene3D G3DSA:2.30.30.60 129 180 1.1E-5 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VV1_2929 2fbcbee3fc04cf56420910fc5a16f474 177 Pfam PF12915 Protein of unknown function (DUF3833) 17 176 1.4E-66 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 VV2_1646 9e76ffab64b179d876542b36e460bb0b 507 SMART SM00530 17 79 1.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV2_1646 9e76ffab64b179d876542b36e460bb0b 507 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 6.3E-103 T 14-10-2018 IPR022055 Protein of unknown function DUF3612 VV2_1646 9e76ffab64b179d876542b36e460bb0b 507 Pfam PF01381 Helix-turn-helix 18 79 2.6E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV2_1646 9e76ffab64b179d876542b36e460bb0b 507 Gene3D G3DSA:1.10.260.40 11 93 8.2E-14 T 14-10-2018 VV2_1646 9e76ffab64b179d876542b36e460bb0b 507 SUPERFAMILY SSF47413 12 84 7.04E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_1646 9e76ffab64b179d876542b36e460bb0b 507 Pfam PF06114 IrrE N-terminal-like domain 206 326 2.5E-5 T 14-10-2018 IPR010359 IrrE N-terminal-like domain VV1_0495 babbea9ea1476c3f2d0172d08f02d563 356 Pfam PF00793 DAHP synthetase I family 42 340 2.3E-104 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VV1_0495 babbea9ea1476c3f2d0172d08f02d563 356 PIRSF PIRSF001361 1 354 1.4E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV1_0495 babbea9ea1476c3f2d0172d08f02d563 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 3.7E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VV1_0495 babbea9ea1476c3f2d0172d08f02d563 356 Gene3D G3DSA:3.20.20.70 3 349 1.8E-156 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0495 babbea9ea1476c3f2d0172d08f02d563 356 SUPERFAMILY SSF51569 8 345 6.23E-139 T 14-10-2018 VV2_1451 1da395e340851cc804b64cfb4d489e49 118 Gene3D G3DSA:3.30.1370.150 59 118 1.5E-30 T 14-10-2018 VV2_1451 1da395e340851cc804b64cfb4d489e49 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 1.6E-31 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 VV2_0413 ecbb5484b86c3790bc108d5f5f16cbd9 617 Gene3D G3DSA:3.30.2010.10 93 188 7.8E-32 T 14-10-2018 VV2_0413 ecbb5484b86c3790bc108d5f5f16cbd9 617 Pfam PF01435 Peptidase family M48 103 329 1.5E-26 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 2.3E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 2.3E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 2.3E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 2.3E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 2.3E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 2.3E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 SUPERFAMILY SSF50993 2 407 6.28E-95 T 14-10-2018 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 Gene3D G3DSA:2.130.10.120 70 403 5.1E-245 T 14-10-2018 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 Pfam PF00326 Prolyl oligopeptidase family 459 673 4.5E-68 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 Gene3D G3DSA:3.40.50.1820 12 642 5.1E-245 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 SUPERFAMILY SSF53474 412 652 2.89E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0795 660a382518b3bbf7aa7ed32912da4f0a 678 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 6 401 6.1E-116 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 1.6E-140 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SUPERFAMILY SSF50998 31 376 9.29E-82 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.808 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SMART SM00564 243 274 0.022 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SMART SM00564 192 223 130.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SMART SM00564 280 312 27.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SMART SM00564 107 138 0.011 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SMART SM00564 146 178 5.2E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SMART SM00564 322 353 1.2 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 SMART SM00564 63 94 0.004 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 Gene3D G3DSA:2.130.10.10 18 385 4.8E-99 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VV1_0424 579eac0257ed064f81a1b8d773a63c53 386 Pfam PF13360 PQQ-like domain 76 311 2.8E-53 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VV1_1641 d512ad812f2aee48da5a2ef52f5b7308 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 6.5E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV1_1641 d512ad812f2aee48da5a2ef52f5b7308 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 6.5E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV1_1641 d512ad812f2aee48da5a2ef52f5b7308 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 6.5E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV1_1641 d512ad812f2aee48da5a2ef52f5b7308 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 6.5E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV1_1641 d512ad812f2aee48da5a2ef52f5b7308 256 PIRSF PIRSF006648 7 253 3.0E-24 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VV1_1641 d512ad812f2aee48da5a2ef52f5b7308 256 Pfam PF01061 ABC-2 type transporter 8 218 6.3E-39 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VV1_0059 d8e36eac200e98a998d18717efc35382 154 Gene3D G3DSA:3.10.129.10 3 144 1.5E-23 T 14-10-2018 VV1_0059 d8e36eac200e98a998d18717efc35382 154 SUPERFAMILY SSF54637 4 143 8.39E-29 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_0059 d8e36eac200e98a998d18717efc35382 154 PIRSF PIRSF020565 1 154 2.4E-68 T 14-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VV1_3015 7a2052ba5fc0514ac34cd6e2ddbf5d66 194 Pfam PF02545 Maf-like protein 5 187 4.5E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_3015 7a2052ba5fc0514ac34cd6e2ddbf5d66 194 SUPERFAMILY SSF52972 2 186 3.53E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_3015 7a2052ba5fc0514ac34cd6e2ddbf5d66 194 Gene3D G3DSA:3.90.950.10 5 194 1.6E-60 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VV1_3015 7a2052ba5fc0514ac34cd6e2ddbf5d66 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 1.5E-53 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_3015 7a2052ba5fc0514ac34cd6e2ddbf5d66 194 PIRSF PIRSF006305 1 193 9.0E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_3015 7a2052ba5fc0514ac34cd6e2ddbf5d66 194 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.624 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 VV1_1194 dc93f769c2fcac11ce4712edd21466aa 64 Pfam PF13592 Winged helix-turn helix 5 62 2.5E-16 T 14-10-2018 IPR025959 Winged helix-turn helix domain VV1_2147 7b6bb665e4d408a9ea404b17e70f1443 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 234 241 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VV1_2147 7b6bb665e4d408a9ea404b17e70f1443 494 Pfam PF00171 Aldehyde dehydrogenase family 16 456 4.0E-85 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VV1_2147 7b6bb665e4d408a9ea404b17e70f1443 494 SUPERFAMILY SSF53720 19 482 1.57E-112 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV1_2147 7b6bb665e4d408a9ea404b17e70f1443 494 Gene3D G3DSA:3.40.309.10 238 436 6.5E-145 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VV1_2147 7b6bb665e4d408a9ea404b17e70f1443 494 PIRSF PIRSF036492 13 491 5.9E-150 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VV1_2147 7b6bb665e4d408a9ea404b17e70f1443 494 Gene3D G3DSA:3.40.605.10 38 456 6.5E-145 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV1_2878 c3eb2d8d9a57b0227e8724ce7a4b058d 77 Pfam PF06667 Phage shock protein B 4 74 9.6E-32 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VV1_2878 c3eb2d8d9a57b0227e8724ce7a4b058d 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 4.1E-35 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VV2_0226 92c6bbed10b527945192a0de6c36201b 197 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 5.8E-29 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VV2_0226 92c6bbed10b527945192a0de6c36201b 197 PIRSF PIRSF011489 1 196 7.4E-88 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VV2_0354 50179f1a0cafcf322a1211a7c1446ab5 128 Pfam PF11756 Nitrous oxide-stimulated promoter 6 107 8.4E-46 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA VV2_0354 50179f1a0cafcf322a1211a7c1446ab5 128 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 9 97 2.0E-48 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA VV1_0360 459c2a865efcf7d0b47004a63bf31d2c 392 SUPERFAMILY SSF56935 49 384 1.47E-17 T 14-10-2018 VV1_2889 a1ff0e30dd3ea6293d3d8e2ffda5f6e2 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 402 1.1E-163 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter VV1_0962 09edf66d39d2aa8d7cf31cd2cf728f6f 278 SUPERFAMILY SSF69572 7 264 3.53E-70 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VV1_0962 09edf66d39d2aa8d7cf31cd2cf728f6f 278 Gene3D G3DSA:3.40.50.720 3 271 1.3E-80 T 14-10-2018 VV1_0962 09edf66d39d2aa8d7cf31cd2cf728f6f 278 Pfam PF00899 ThiF family 10 261 6.8E-55 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 Gene3D G3DSA:3.90.1150.10 14 392 5.5E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 SUPERFAMILY SSF53383 3 398 5.16E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 Pfam PF00155 Aminotransferase class I and II 30 392 4.8E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV2_0334 84439cb9f078816899ed8ef76ca96a10 398 Gene3D G3DSA:3.40.640.10 48 315 5.5E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0063 eed97a94811edb2d83550207c99d81fc 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 321 1.4E-53 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VV1_0722 191f958037b6753ce0af767c1adf1c9a 300 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 39 288 2.2E-107 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VV1_0722 191f958037b6753ce0af767c1adf1c9a 300 Pfam PF10987 Protein of unknown function (DUF2806) 60 278 4.1E-88 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VV1_2629 19c7678048ed505b437e504a8907d8b4 172 Pfam PF07977 FabA-like domain 29 158 2.8E-54 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_2629 19c7678048ed505b437e504a8907d8b4 172 SUPERFAMILY SSF54637 4 169 1.31E-56 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_2629 19c7678048ed505b437e504a8907d8b4 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.736 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_2629 19c7678048ed505b437e504a8907d8b4 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.2E-93 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VV1_2629 19c7678048ed505b437e504a8907d8b4 172 Gene3D G3DSA:3.10.129.10 2 172 1.8E-66 T 14-10-2018 VV2_1041 1318d0c64e9d4a1d7e7bd64c8ee2e0db 450 Gene3D G3DSA:3.40.190.10 129 395 1.6E-57 T 14-10-2018 VV2_1041 1318d0c64e9d4a1d7e7bd64c8ee2e0db 450 Gene3D G3DSA:3.40.190.10 39 340 1.6E-57 T 14-10-2018 VV2_1041 1318d0c64e9d4a1d7e7bd64c8ee2e0db 450 SUPERFAMILY SSF53850 21 405 2.32E-62 T 14-10-2018 VV2_1041 1318d0c64e9d4a1d7e7bd64c8ee2e0db 450 Pfam PF01547 Bacterial extracellular solute-binding protein 32 318 1.8E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein VV1_2287 df9e41f8e8a10b034b3d01b8436f873a 200 SMART SM00702 11 187 1.7E-26 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VV1_2287 df9e41f8e8a10b034b3d01b8436f873a 200 Gene3D G3DSA:2.60.120.620 1 189 4.7E-53 T 14-10-2018 VV1_2287 df9e41f8e8a10b034b3d01b8436f873a 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.4E-20 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VV2_0145 d13649ea2c11ee251fb4224d7ee9c6e4 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 262 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_0145 d13649ea2c11ee251fb4224d7ee9c6e4 275 Pfam PF12833 Helix-turn-helix domain 190 267 1.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0145 d13649ea2c11ee251fb4224d7ee9c6e4 275 Gene3D G3DSA:1.10.10.60 163 274 2.7E-30 T 14-10-2018 VV2_0145 d13649ea2c11ee251fb4224d7ee9c6e4 275 SUPERFAMILY SSF46689 220 270 1.25E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0145 d13649ea2c11ee251fb4224d7ee9c6e4 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 8.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0145 d13649ea2c11ee251fb4224d7ee9c6e4 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 8.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0145 d13649ea2c11ee251fb4224d7ee9c6e4 275 SMART SM00342 184 266 1.7E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV1_2769 5c412869777cd5054982efab0a7798f7 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 365 2.1E-158 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like VV1_2769 5c412869777cd5054982efab0a7798f7 368 SUPERFAMILY SSF55031 177 289 7.33E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VV1_2769 5c412869777cd5054982efab0a7798f7 368 Pfam PF01546 Peptidase family M20/M25/M40 72 367 2.7E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 VV1_2769 5c412869777cd5054982efab0a7798f7 368 Gene3D G3DSA:3.40.630.10 16 362 2.0E-113 T 14-10-2018 VV1_2769 5c412869777cd5054982efab0a7798f7 368 PIRSF PIRSF001123 6 105 2.1 T 14-10-2018 IPR008007 Peptidase M42 VV1_2769 5c412869777cd5054982efab0a7798f7 368 PIRSF PIRSF001123 293 368 0.0015 T 14-10-2018 IPR008007 Peptidase M42 VV1_2769 5c412869777cd5054982efab0a7798f7 368 PIRSF PIRSF001123 80 180 3.8E-4 T 14-10-2018 IPR008007 Peptidase M42 VV1_2769 5c412869777cd5054982efab0a7798f7 368 Gene3D G3DSA:3.30.70.360 176 287 2.0E-113 T 14-10-2018 VV1_2769 5c412869777cd5054982efab0a7798f7 368 Pfam PF07687 Peptidase dimerisation domain 182 273 6.8E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain VV1_2769 5c412869777cd5054982efab0a7798f7 368 SUPERFAMILY SSF53187 7 367 2.77E-59 T 14-10-2018 VV1_1577 f4945871498923b7b385538d578fd7bb 269 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 4.5E-102 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG VV1_1577 f4945871498923b7b385538d578fd7bb 269 SUPERFAMILY SSF101386 3 105 1.05E-23 T 14-10-2018 VV1_1577 f4945871498923b7b385538d578fd7bb 269 SUPERFAMILY SSF101386 138 240 1.1E-23 T 14-10-2018 VV1_1577 f4945871498923b7b385538d578fd7bb 269 Gene3D G3DSA:1.10.287.1080 2 126 3.7E-44 T 14-10-2018 VV1_1577 f4945871498923b7b385538d578fd7bb 269 Gene3D G3DSA:1.10.287.1080 132 265 5.6E-47 T 14-10-2018 VV1_1577 f4945871498923b7b385538d578fd7bb 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 2.1E-26 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VV1_1577 f4945871498923b7b385538d578fd7bb 269 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 1.9E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VV1_1964 75982410a5e4c2f06adc41b377d6f801 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 4.4E-20 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VV1_1964 75982410a5e4c2f06adc41b377d6f801 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 8.7E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 Gene3D G3DSA:1.10.10.10 3 102 4.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.0E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 4.1E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 SUPERFAMILY SSF46785 5 88 3.39E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1140 0272060e92c6b476d0cf019e1a59b149 111 SMART SM00418 5 83 4.0E-25 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_2703 09e70b9d2d4175a3f590ad815a0992c7 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 3.8E-31 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2703 09e70b9d2d4175a3f590ad815a0992c7 342 Gene3D G3DSA:3.40.190.10 28 257 1.5E-51 T 14-10-2018 VV1_2703 09e70b9d2d4175a3f590ad815a0992c7 342 SMART SM00062 38 267 2.1E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2703 09e70b9d2d4175a3f590ad815a0992c7 342 Gene3D G3DSA:3.40.190.10 130 225 1.5E-51 T 14-10-2018 VV1_2703 09e70b9d2d4175a3f590ad815a0992c7 342 SUPERFAMILY SSF53850 29 259 2.45E-50 T 14-10-2018 VV1_0954 d88c0e3f22e6c5dbb46906e7cf192158 148 Pfam PF07681 DoxX 24 104 1.4E-18 T 14-10-2018 IPR032808 DoxX family VV2_0320 75d0b793a3deaf7ae9a0127c52bc4c20 414 Gene3D G3DSA:3.30.70.270 229 412 1.1E-43 T 14-10-2018 VV2_0320 75d0b793a3deaf7ae9a0127c52bc4c20 414 SUPERFAMILY SSF55073 243 410 2.59E-33 T 14-10-2018 IPR029787 Nucleotide cyclase VV2_0320 75d0b793a3deaf7ae9a0127c52bc4c20 414 SMART SM00267 226 412 3.8E-34 T 14-10-2018 IPR000160 GGDEF domain VV2_0320 75d0b793a3deaf7ae9a0127c52bc4c20 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 408 1.1E-5 T 14-10-2018 IPR000160 GGDEF domain VV2_0320 75d0b793a3deaf7ae9a0127c52bc4c20 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 341 3.3E-22 T 14-10-2018 IPR000160 GGDEF domain VV2_0320 75d0b793a3deaf7ae9a0127c52bc4c20 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 356 5.9E-23 T 14-10-2018 IPR000160 GGDEF domain VV1_0217 73baf06718e3d75444813b675673cbe2 638 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 581 637 2.3E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VV1_0217 73baf06718e3d75444813b675673cbe2 638 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 339 9.0E-62 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0217 73baf06718e3d75444813b675673cbe2 638 SUPERFAMILY SSF64518 171 637 1.96E-24 T 14-10-2018 VV1_0217 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0217 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0217 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0217 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0217 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_0217 73baf06718e3d75444813b675673cbe2 638 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 9.5E-14 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VV1_2076 9ecffbf896f50197764d6d7fd9e16525 182 Gene3D G3DSA:3.40.630.30 1 178 2.0E-45 T 14-10-2018 VV1_2076 9ecffbf896f50197764d6d7fd9e16525 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 5.2E-23 T 14-10-2018 IPR000182 GNAT domain VV1_2076 9ecffbf896f50197764d6d7fd9e16525 182 SUPERFAMILY SSF55729 3 177 1.6E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0047 9bed4dc25127ee72869466ddb3b95353 116 SUPERFAMILY SSF88697 16 116 2.49E-35 T 14-10-2018 IPR015947 PUA-like superfamily VV2_0047 9bed4dc25127ee72869466ddb3b95353 116 SMART SM01022 19 115 2.7E-26 T 14-10-2018 IPR007374 ASCH domain VV2_0047 9bed4dc25127ee72869466ddb3b95353 116 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 15 116 32.778 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VV2_0047 9bed4dc25127ee72869466ddb3b95353 116 PIRSF PIRSF029143 14 116 5.3E-50 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VV2_0047 9bed4dc25127ee72869466ddb3b95353 116 Gene3D G3DSA:2.30.130.30 14 116 1.6E-47 T 14-10-2018 VV2_0047 9bed4dc25127ee72869466ddb3b95353 116 Pfam PF04266 ASCH domain 19 105 1.4E-15 T 14-10-2018 IPR007374 ASCH domain VV1_2630 bd98d8b6a835ea475484404f649d3f05 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.214 T 14-10-2018 IPR007040 Ribosome modulation factor VV1_2630 bd98d8b6a835ea475484404f649d3f05 57 Gene3D G3DSA:1.10.10.620 1 57 2.5E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily VV1_2630 bd98d8b6a835ea475484404f649d3f05 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 2.0E-23 T 14-10-2018 IPR007040 Ribosome modulation factor VV1_2630 bd98d8b6a835ea475484404f649d3f05 57 Pfam PF04957 Ribosome modulation factor 1 54 8.0E-29 T 14-10-2018 IPR007040 Ribosome modulation factor VV1_0471 cfca6b7d9c5f18374d5869f0702089a8 84 SUPERFAMILY SSF54862 4 72 3.35E-17 T 14-10-2018 VV1_0471 cfca6b7d9c5f18374d5869f0702089a8 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_0471 cfca6b7d9c5f18374d5869f0702089a8 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_0471 cfca6b7d9c5f18374d5869f0702089a8 84 Gene3D G3DSA:3.30.70.20 2 83 1.7E-34 T 14-10-2018 VV1_2153 570fe12699a77bd8a65128b7949e5900 323 Gene3D G3DSA:3.40.50.150 63 296 1.8E-21 T 14-10-2018 VV1_2153 570fe12699a77bd8a65128b7949e5900 323 SUPERFAMILY SSF53335 91 323 3.14E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2153 570fe12699a77bd8a65128b7949e5900 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.0E-172 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like VV1_2153 570fe12699a77bd8a65128b7949e5900 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.385 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VV1_2153 570fe12699a77bd8a65128b7949e5900 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.2E-146 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VV1_1388 ae5be97997a1231d6562ea70bef35c2b 100 PIRSF PIRSF003135 1 100 1.7E-45 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VV1_1388 ae5be97997a1231d6562ea70bef35c2b 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.252 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VV1_1388 ae5be97997a1231d6562ea70bef35c2b 100 Pfam PF00436 Single-strand binding protein family 3 87 8.4E-8 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VV1_1388 ae5be97997a1231d6562ea70bef35c2b 100 Gene3D G3DSA:2.40.50.140 1 100 1.4E-30 T 14-10-2018 VV1_1388 ae5be97997a1231d6562ea70bef35c2b 100 SUPERFAMILY SSF50249 1 98 2.5E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_1388 ae5be97997a1231d6562ea70bef35c2b 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 97 1.4E-32 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VV1_0361 97964b491f404ba277265ff0f8a12454 216 SUPERFAMILY SSF51004 37 151 1.57E-7 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VV2_0650 5f7b78a2027878f1e184dc5eb0f352db 290 SMART SM01252 48 157 2.1E-35 T 14-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding VV2_0650 5f7b78a2027878f1e184dc5eb0f352db 290 Pfam PF04383 KilA-N domain 53 155 3.7E-22 T 14-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding VV2_1628 e0e82202a7ecfd1b2830de891517dc8f 458 Pfam PF07670 Nucleoside recognition 144 238 1.3E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV1_3027 fbe8ca1f1f46380f5e2ce9645343411c 359 Gene3D G3DSA:3.40.50.300 79 336 3.0E-82 T 14-10-2018 VV1_3027 fbe8ca1f1f46380f5e2ce9645343411c 359 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 VV1_3027 fbe8ca1f1f46380f5e2ce9645343411c 359 SUPERFAMILY SSF52540 89 321 1.59E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3027 fbe8ca1f1f46380f5e2ce9645343411c 359 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 4.0E-97 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VV1_3027 fbe8ca1f1f46380f5e2ce9645343411c 359 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 334 35.68 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VV1_2378 429a2e5b743cf729984abea7919a22f2 391 SUPERFAMILY SSF51246 317 389 1.32E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VV1_2378 429a2e5b743cf729984abea7919a22f2 391 SUPERFAMILY SSF52440 2 110 6.91E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VV1_2378 429a2e5b743cf729984abea7919a22f2 391 Gene3D G3DSA:3.30.1490.20 121 194 8.8E-33 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_2378 429a2e5b743cf729984abea7919a22f2 391 SUPERFAMILY SSF56059 111 313 1.63E-56 T 14-10-2018 VV1_2378 429a2e5b743cf729984abea7919a22f2 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.349 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VV1_2378 429a2e5b743cf729984abea7919a22f2 391 Pfam PF02222 ATP-grasp domain 121 293 3.3E-58 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VV1_2378 429a2e5b743cf729984abea7919a22f2 391 Gene3D G3DSA:3.40.50.20 1 120 1.6E-53 T 14-10-2018 VV1_2378 429a2e5b743cf729984abea7919a22f2 391 Gene3D G3DSA:3.30.470.20 195 389 1.1E-58 T 14-10-2018 VV1_2378 429a2e5b743cf729984abea7919a22f2 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 1.4E-188 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VV1_0164 0d1deed1246ea95e61a53739d4f202fb 253 Pfam PF08907 Domain of unknown function (DUF1853) 9 213 5.1E-37 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 VV1_1162 fa1af02b0aadf24d1a5bb4a1ecd22211 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 1.7E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VV1_0675 5ee584ce605d6555d512c64d4327ade1 322 Pfam PF16868 NMT1-like family 30 319 2.0E-96 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VV1_0675 5ee584ce605d6555d512c64d4327ade1 322 Gene3D G3DSA:3.40.190.10 117 255 1.2E-110 T 14-10-2018 VV1_0675 5ee584ce605d6555d512c64d4327ade1 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 11 319 2.5E-112 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VV1_0675 5ee584ce605d6555d512c64d4327ade1 322 SUPERFAMILY SSF53850 25 321 3.21E-88 T 14-10-2018 VV1_0675 5ee584ce605d6555d512c64d4327ade1 322 Gene3D G3DSA:3.40.190.10 30 319 1.2E-110 T 14-10-2018 VV1_0416 30c341e80d3ef626e6d9bcb6ee6ff1c1 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VV1_0416 30c341e80d3ef626e6d9bcb6ee6ff1c1 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 175 1.0E-35 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VV1_2385 793a6d57f043928539113873bc68923b 1014 Pfam PF13183 4Fe-4S dicluster domain 570 681 3.1E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VV1_2385 793a6d57f043928539113873bc68923b 1014 SUPERFAMILY SSF56176 18 277 2.24E-50 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VV1_2385 793a6d57f043928539113873bc68923b 1014 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VV1_2385 793a6d57f043928539113873bc68923b 1014 SUPERFAMILY SSF55103 253 537 1.46E-51 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VV1_2385 793a6d57f043928539113873bc68923b 1014 Pfam PF01565 FAD binding domain 52 191 3.0E-35 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VV1_2385 793a6d57f043928539113873bc68923b 1014 Gene3D G3DSA:3.30.70.2740 414 495 4.9E-5 T 14-10-2018 VV1_2385 793a6d57f043928539113873bc68923b 1014 Gene3D G3DSA:1.10.45.10 514 535 4.9E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 VV1_2385 793a6d57f043928539113873bc68923b 1014 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 5.0E-60 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VV1_2385 793a6d57f043928539113873bc68923b 1014 SUPERFAMILY SSF46548 563 685 1.88E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VV1_2385 793a6d57f043928539113873bc68923b 1014 Gene3D G3DSA:3.30.465.40 16 212 1.8E-46 T 14-10-2018 VV2_0490 cd00b86b22121cc9929ad7ba23fc3c3b 375 SUPERFAMILY SSF52096 16 344 1.55E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV2_0490 cd00b86b22121cc9929ad7ba23fc3c3b 375 Pfam PF16113 Enoyl-CoA hydratase/isomerase 20 358 2.3E-108 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 VV2_0490 cd00b86b22121cc9929ad7ba23fc3c3b 375 Gene3D G3DSA:3.90.226.10 4 375 7.6E-114 T 14-10-2018 VV1_2242 147742d2710f5769c0228ab22310a6e3 161 SUPERFAMILY SSF46785 5 140 9.71E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2242 147742d2710f5769c0228ab22310a6e3 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_2242 147742d2710f5769c0228ab22310a6e3 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_2242 147742d2710f5769c0228ab22310a6e3 161 Pfam PF01047 MarR family 31 89 1.7E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_2242 147742d2710f5769c0228ab22310a6e3 161 Gene3D G3DSA:1.10.10.10 2 137 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2242 147742d2710f5769c0228ab22310a6e3 161 SMART SM00347 24 124 1.6E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_2072 6f79ef9cbc34a206bc0360ef49695be9 180 Gene3D G3DSA:3.40.50.1820 1 180 1.3E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2072 6f79ef9cbc34a206bc0360ef49695be9 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 2.4E-71 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VV1_2072 6f79ef9cbc34a206bc0360ef49695be9 180 SUPERFAMILY SSF53474 2 176 2.01E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2072 6f79ef9cbc34a206bc0360ef49695be9 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.556 T 14-10-2018 IPR022987 Uncharacterised protein family UPF0227 VV2_0231 2f5f62cc94a5835764ad3a7ff0d383de 189 Gene3D G3DSA:2.40.128.110 23 189 6.4E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VV2_0231 2f5f62cc94a5835764ad3a7ff0d383de 189 SMART SM00867 24 187 2.3E-59 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VV2_0231 2f5f62cc94a5835764ad3a7ff0d383de 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 46.254 T 14-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI VV2_0231 2f5f62cc94a5835764ad3a7ff0d383de 189 SUPERFAMILY SSF101874 23 188 1.31E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VV2_0231 2f5f62cc94a5835764ad3a7ff0d383de 189 Pfam PF04264 YceI-like domain 25 184 2.8E-34 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VV1_2956 4c71f51b7e063a2c990a5ff3d7ca20b1 257 PIRSF PIRSF020736 2 257 3.8E-91 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VV1_2956 4c71f51b7e063a2c990a5ff3d7ca20b1 257 Gene3D G3DSA:1.20.1260.10 7 76 1.2E-16 T 14-10-2018 IPR012347 Ferritin-like VV1_2956 4c71f51b7e063a2c990a5ff3d7ca20b1 257 Gene3D G3DSA:1.20.1260.10 96 257 1.1E-54 T 14-10-2018 IPR012347 Ferritin-like VV1_2956 4c71f51b7e063a2c990a5ff3d7ca20b1 257 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 4.5E-117 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VV1_2956 4c71f51b7e063a2c990a5ff3d7ca20b1 257 SUPERFAMILY SSF47240 11 255 7.26E-74 T 14-10-2018 IPR009078 Ferritin-like superfamily VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 430 8.7E-160 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 480 568 1.1E-17 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 7.1E-162 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 Gene3D G3DSA:3.40.1670.10 479 583 1.6E-20 T 14-10-2018 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 Gene3D G3DSA:3.40.1670.10 337 453 1.2E-43 T 14-10-2018 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 SUPERFAMILY SSF143968 323 459 9.68E-51 T 14-10-2018 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 SUPERFAMILY SSF143968 480 615 1.1E-31 T 14-10-2018 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 SUPERFAMILY SSF50475 3 322 1.45E-122 T 14-10-2018 VV1_0935 97ae9a7721bbb2d9e0d35bb31423a2d3 617 Gene3D G3DSA:1.20.5.570 584 617 1.9E-14 T 14-10-2018 VV2_0022 265b59096fe6f54b24c7b9ea19c74d91 92 SUPERFAMILY SSF52821 2 83 2.62E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV2_0022 265b59096fe6f54b24c7b9ea19c74d91 92 SMART SM00450 2 91 6.1E-17 T 14-10-2018 IPR001763 Rhodanese-like domain VV2_0022 265b59096fe6f54b24c7b9ea19c74d91 92 Gene3D G3DSA:3.40.250.10 1 86 1.6E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV2_0022 265b59096fe6f54b24c7b9ea19c74d91 92 Pfam PF00581 Rhodanese-like domain 3 80 3.8E-16 T 14-10-2018 IPR001763 Rhodanese-like domain VV1_2991 16ee0057af6f8a2764d582ffddfc4240 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_2991 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF53067 86 393 7.69E-55 T 14-10-2018 VV1_2991 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 91 387 2.9E-111 T 14-10-2018 VV1_2991 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:1.10.10.10 2 81 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2991 16ee0057af6f8a2764d582ffddfc4240 405 Pfam PF00480 ROK family 88 390 2.1E-70 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VV1_2991 16ee0057af6f8a2764d582ffddfc4240 405 SUPERFAMILY SSF46785 10 76 3.45E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2991 16ee0057af6f8a2764d582ffddfc4240 405 Gene3D G3DSA:3.30.420.40 208 377 2.9E-111 T 14-10-2018 VV2_0565 be23ee9685fdcd9802f03095a660dae7 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 1.7E-49 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0565 be23ee9685fdcd9802f03095a660dae7 294 SUPERFAMILY SSF81452 3 294 7.72E-78 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0565 be23ee9685fdcd9802f03095a660dae7 294 Gene3D G3DSA:1.10.287.70 1 78 2.2E-18 T 14-10-2018 VV2_0565 be23ee9685fdcd9802f03095a660dae7 294 Gene3D G3DSA:1.20.120.80 79 294 2.4E-62 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_1432 5c5e1d93a4d32d8b6d07667776ead1f4 249 SUPERFAMILY SSF48317 17 232 4.06E-21 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VV2_1432 5c5e1d93a4d32d8b6d07667776ead1f4 249 Gene3D G3DSA:1.20.144.10 9 240 1.3E-45 T 14-10-2018 VV2_1432 5c5e1d93a4d32d8b6d07667776ead1f4 249 Pfam PF01569 PAP2 superfamily 83 228 4.8E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV2_1432 5c5e1d93a4d32d8b6d07667776ead1f4 249 SMART SM00014 80 228 3.2E-6 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV1_1420 9055f11119d295054d56afb2a8a23fb1 376 Pfam PF08495 FIST N domain 28 215 2.4E-32 T 14-10-2018 IPR013702 FIST domain, N-terminal VV1_1420 9055f11119d295054d56afb2a8a23fb1 376 SMART SM01204 218 355 1.1E-44 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VV1_1420 9055f11119d295054d56afb2a8a23fb1 376 Pfam PF10442 FIST C domain 218 354 7.7E-30 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VV1_1420 9055f11119d295054d56afb2a8a23fb1 376 SMART SM00897 24 217 2.5E-45 T 14-10-2018 IPR013702 FIST domain, N-terminal VV2_0066 436c1372d6379bf2793de3f34b571864 339 SMART SM00354 1 72 3.2E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0066 436c1372d6379bf2793de3f34b571864 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 45 4.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0066 436c1372d6379bf2793de3f34b571864 339 Gene3D G3DSA:3.40.50.2300 70 323 1.3E-88 T 14-10-2018 VV2_0066 436c1372d6379bf2793de3f34b571864 339 SUPERFAMILY SSF47413 1 61 8.59E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_0066 436c1372d6379bf2793de3f34b571864 339 Gene3D G3DSA:3.40.50.2300 162 291 1.3E-88 T 14-10-2018 VV2_0066 436c1372d6379bf2793de3f34b571864 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 VV2_0066 436c1372d6379bf2793de3f34b571864 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0066 436c1372d6379bf2793de3f34b571864 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VV2_0066 436c1372d6379bf2793de3f34b571864 339 Gene3D G3DSA:1.10.260.40 3 60 7.2E-22 T 14-10-2018 VV2_0066 436c1372d6379bf2793de3f34b571864 339 Pfam PF13377 Periplasmic binding protein-like domain 171 331 8.1E-43 T 14-10-2018 VV2_0066 436c1372d6379bf2793de3f34b571864 339 SUPERFAMILY SSF53822 62 332 4.12E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_0470 ebf4b01fb0b316c51d52fd59fb919207 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 452 6.3E-21 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal VV1_0470 ebf4b01fb0b316c51d52fd59fb919207 466 Pfam PF01136 Peptidase family U32 80 355 9.3E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VV1_0470 ebf4b01fb0b316c51d52fd59fb919207 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VV1_0470 ebf4b01fb0b316c51d52fd59fb919207 466 Gene3D G3DSA:2.40.30.10 367 453 1.6E-8 T 14-10-2018 VV2_0038 b113ce598a16a20a20d3cd679528b19f 191 SUPERFAMILY SSF56300 9 163 1.02E-30 T 14-10-2018 VV2_0038 b113ce598a16a20a20d3cd679528b19f 191 Gene3D G3DSA:3.60.21.10 3 188 5.2E-36 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV2_0038 b113ce598a16a20a20d3cd679528b19f 191 Pfam PF00149 Calcineurin-like phosphoesterase 15 120 2.6E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV1_0052 7713cc38b3686c03e8f22812c14cf7ff 569 Gene3D G3DSA:3.90.550.10 5 214 1.1E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0052 7713cc38b3686c03e8f22812c14cf7ff 569 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 337 552 2.6E-11 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV1_0052 7713cc38b3686c03e8f22812c14cf7ff 569 Pfam PF00535 Glycosyl transferase family 2 8 128 4.5E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VV1_0052 7713cc38b3686c03e8f22812c14cf7ff 569 SUPERFAMILY SSF53448 7 235 2.44E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 Gene3D G3DSA:1.25.40.10 235 446 1.4E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 Pfam PF13424 Tetratricopeptide repeat 248 311 2.0E-7 T 14-10-2018 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 SUPERFAMILY SSF48452 169 355 1.52E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 Gene3D G3DSA:1.25.40.10 9 233 3.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 SMART SM00028 168 201 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 SMART SM00028 248 281 54.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 SMART SM00028 328 361 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 SMART SM00028 82 115 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV1_0298 0a16590a36fbbdb0068dc099e73060b3 754 SMART SM00028 288 321 0.13 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 SMART SM00327 90 291 9.9E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 Gene3D G3DSA:1.25.40.10 340 463 2.4E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 SUPERFAMILY SSF48452 356 450 2.6E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 SUPERFAMILY SSF53300 92 273 9.41E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 Pfam PF00515 Tetratricopeptide repeat 403 435 5.5E-11 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 SMART SM00028 403 436 1.4E-9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 Gene3D G3DSA:3.40.50.410 89 291 6.1E-36 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VV2_1562 9e03b7eb081c145e9943ebd328cfb81e 656 Pfam PF13519 von Willebrand factor type A domain 94 200 2.8E-16 T 14-10-2018 IPR002035 von Willebrand factor, type A VV2_1581 5313e76b13c137570883ec98aa7028ae 406 Pfam PF10082 Putative beta-barrel porin 2 35 404 8.5E-31 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 VV1_0797 57b48b1c18b5470338675d2944dcc454 326 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 309 1.1E-73 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV1_0797 57b48b1c18b5470338675d2944dcc454 326 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 314 43.567 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VV1_0797 57b48b1c18b5470338675d2944dcc454 326 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 1.1E-101 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VV1_0797 57b48b1c18b5470338675d2944dcc454 326 PIRSF PIRSF026649 12 318 4.3E-80 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VV1_1581 5ad1544f883d556d5cf56e694fd0522c 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.024 T 14-10-2018 IPR023081 Cell division protein FtsB VV1_1581 5ad1544f883d556d5cf56e694fd0522c 93 Pfam PF04977 Septum formation initiator 11 89 6.1E-28 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VV1_1581 5ad1544f883d556d5cf56e694fd0522c 93 Gene3D G3DSA:1.20.5.400 22 63 3.3E-10 T 14-10-2018 VV2_0437 2d701824f094a34ef0499753156a2f7b 170 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 3.1E-61 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VV2_0437 2d701824f094a34ef0499753156a2f7b 170 PIRSF PIRSF028301 1 170 6.7E-66 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VV2_0437 2d701824f094a34ef0499753156a2f7b 170 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 1.1E-60 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VV1_2210 0472d9e9fb907ba11b1770e0d6f79e2f 309 PIRSF PIRSF006278 193 297 0.13 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VV1_2210 0472d9e9fb907ba11b1770e0d6f79e2f 309 PIRSF PIRSF006278 4 184 2.9E-20 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VV1_2210 0472d9e9fb907ba11b1770e0d6f79e2f 309 SUPERFAMILY SSF53686 9 295 6.66E-58 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VV1_2210 0472d9e9fb907ba11b1770e0d6f79e2f 309 Gene3D G3DSA:3.40.50.1100 14 285 1.5E-24 T 14-10-2018 VV1_2210 0472d9e9fb907ba11b1770e0d6f79e2f 309 Gene3D G3DSA:3.40.50.1100 33 137 1.5E-24 T 14-10-2018 VV1_2210 0472d9e9fb907ba11b1770e0d6f79e2f 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 222 1.5E-10 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VV2_0079 04873990bb56a955f4a3187bebbdd10b 377 Gene3D G3DSA:3.60.21.10 1 265 2.9E-78 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like VV2_0079 04873990bb56a955f4a3187bebbdd10b 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 8.4E-54 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 VV2_0079 04873990bb56a955f4a3187bebbdd10b 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 3.2E-10 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VV2_0079 04873990bb56a955f4a3187bebbdd10b 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 217 3.5E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VV2_0079 04873990bb56a955f4a3187bebbdd10b 377 SUPERFAMILY SSF56300 1 320 1.11E-58 T 14-10-2018 VV1_0110 27d500720510e9e00c40617c70399bb3 88 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 2 77 3.4E-29 T 14-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin VV2_0188 d3fd10c729c05afd51cd608ed9b99d68 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV2_0188 d3fd10c729c05afd51cd608ed9b99d68 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.392 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV2_0188 d3fd10c729c05afd51cd608ed9b99d68 431 PIRSF PIRSF000412 3 431 5.3E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV2_0188 d3fd10c729c05afd51cd608ed9b99d68 431 Gene3D G3DSA:3.90.1150.10 21 403 3.7E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_0188 d3fd10c729c05afd51cd608ed9b99d68 431 SUPERFAMILY SSF53383 8 430 4.59E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0188 d3fd10c729c05afd51cd608ed9b99d68 431 Gene3D G3DSA:3.40.640.10 47 298 3.7E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0188 d3fd10c729c05afd51cd608ed9b99d68 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 4.5E-176 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VV2_1402 022f44a0bc038fdcbf260fcf12179499 301 SUPERFAMILY SSF103481 185 286 1.12E-13 T 14-10-2018 VV2_1402 022f44a0bc038fdcbf260fcf12179499 301 Pfam PF00892 EamA-like transporter family 9 135 1.3E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1402 022f44a0bc038fdcbf260fcf12179499 301 Pfam PF00892 EamA-like transporter family 150 283 2.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1402 022f44a0bc038fdcbf260fcf12179499 301 SUPERFAMILY SSF103481 42 138 1.28E-11 T 14-10-2018 VV2_1421 d84f08e0995662a2ffbf533948b22c3b 98 SUPERFAMILY SSF81296 15 96 1.35E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_1421 d84f08e0995662a2ffbf533948b22c3b 98 Gene3D G3DSA:2.60.40.10 10 97 2.9E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_0835 08f50628019178cd88c6f813a322bd69 393 SUPERFAMILY SSF56322 18 385 2.62E-86 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV2_0835 08f50628019178cd88c6f813a322bd69 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 105 382 7.1E-85 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VV2_0835 08f50628019178cd88c6f813a322bd69 393 Pfam PF00425 chorismate binding enzyme 121 375 2.9E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VV2_0835 08f50628019178cd88c6f813a322bd69 393 Gene3D G3DSA:3.60.120.10 3 391 1.9E-114 T 14-10-2018 IPR005801 ADC synthase GO:0009058 VV2_1469 643e1699965a3b4a4a9f0765cf3d48c2 249 SMART SM00481 5 79 1.3E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VV2_1469 643e1699965a3b4a4a9f0765cf3d48c2 249 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 53.699 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VV2_1469 643e1699965a3b4a4a9f0765cf3d48c2 249 SUPERFAMILY SSF89550 4 243 2.09E-59 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VV2_1469 643e1699965a3b4a4a9f0765cf3d48c2 249 Gene3D G3DSA:3.20.20.140 3 247 1.2E-60 T 14-10-2018 VV2_0973 a80b941c6d13daefc816d81ec0ea8b89 178 Gene3D G3DSA:1.25.40.10 78 178 1.3E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0973 a80b941c6d13daefc816d81ec0ea8b89 178 SUPERFAMILY SSF48452 2 174 3.79E-68 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0973 a80b941c6d13daefc816d81ec0ea8b89 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 2.7E-63 T 14-10-2018 IPR010323 Protein of unknown function DUF924 VV2_0973 a80b941c6d13daefc816d81ec0ea8b89 178 Gene3D G3DSA:1.20.58.320 1 77 1.4E-25 T 14-10-2018 VV1_2435 19fd2f6e1b607d7d5437361f154eb3dd 164 SUPERFAMILY SSF55729 61 146 3.67E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2435 19fd2f6e1b607d7d5437361f154eb3dd 164 Gene3D G3DSA:3.40.630.30 17 142 9.4E-15 T 14-10-2018 VV1_2435 19fd2f6e1b607d7d5437361f154eb3dd 164 Pfam PF13302 Acetyltransferase (GNAT) domain 65 142 2.7E-7 T 14-10-2018 IPR000182 GNAT domain VV1_2505 216fe3d7667fc97af535ca1bf6bf8e0d 143 Pfam PF00293 NUDIX domain 16 83 7.5E-9 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_2505 216fe3d7667fc97af535ca1bf6bf8e0d 143 Gene3D G3DSA:3.90.79.10 2 126 7.1E-12 T 14-10-2018 VV1_2505 216fe3d7667fc97af535ca1bf6bf8e0d 143 SUPERFAMILY SSF55811 8 136 1.62E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_2167 5fb09de38cb920460d9d5accf6527531 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 44.115 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VV1_2167 5fb09de38cb920460d9d5accf6527531 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 5.1E-93 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VV1_2167 5fb09de38cb920460d9d5accf6527531 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 3.5E-42 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VV2_1519 632271058bb1e0a1d1f4274fc341e502 302 Gene3D G3DSA:3.40.190.10 45 280 4.1E-39 T 14-10-2018 VV2_1519 632271058bb1e0a1d1f4274fc341e502 302 Gene3D G3DSA:3.40.190.10 100 235 4.1E-39 T 14-10-2018 VV2_1519 632271058bb1e0a1d1f4274fc341e502 302 SUPERFAMILY SSF53850 44 291 1.05E-35 T 14-10-2018 VV2_1519 632271058bb1e0a1d1f4274fc341e502 302 Pfam PF12849 PBP superfamily domain 45 245 1.9E-9 T 14-10-2018 IPR024370 PBP domain VV2_0162 dd6b8291492aaa254e55498b05af1f7c 261 Pfam PF03781 Sulfatase-modifying factor enzyme 1 36 258 6.4E-46 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VV2_0162 dd6b8291492aaa254e55498b05af1f7c 261 SUPERFAMILY SSF56436 36 260 2.59E-58 T 14-10-2018 IPR016187 C-type lectin fold VV2_0162 dd6b8291492aaa254e55498b05af1f7c 261 Gene3D G3DSA:3.90.1580.10 29 258 1.8E-58 T 14-10-2018 VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 SUPERFAMILY SSF53850 95 300 5.12E-38 T 14-10-2018 VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 Gene3D G3DSA:3.40.190.10 98 297 6.6E-58 T 14-10-2018 VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 Pfam PF03466 LysR substrate binding domain 94 300 1.5E-38 T 14-10-2018 IPR005119 LysR, substrate-binding VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 Gene3D G3DSA:1.10.10.10 9 95 3.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 SUPERFAMILY SSF46785 11 91 4.79E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1478 83d17bad933909d7eac5c44bcc5e0595 303 Gene3D G3DSA:3.40.190.10 169 270 6.6E-58 T 14-10-2018 VV1_2497 c62acc86baab38af58759b96062bacc3 98 Gene3D G3DSA:1.10.260.40 8 90 5.2E-19 T 14-10-2018 VV1_2497 c62acc86baab38af58759b96062bacc3 98 SUPERFAMILY SSF47413 21 88 1.21E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_2497 c62acc86baab38af58759b96062bacc3 98 Pfam PF13744 Helix-turn-helix domain 21 87 3.0E-18 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain VV1_2497 c62acc86baab38af58759b96062bacc3 98 SMART SM00530 31 87 1.2E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_2568 1c1e8a1b3ffe9c1d39c8bb42a0893881 268 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 5.8E-25 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VV1_1425 0aa522547880ffdc413856f49d66e578 373 PIRSF PIRSF000524 5 373 3.2E-111 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VV1_1425 0aa522547880ffdc413856f49d66e578 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VV1_1425 0aa522547880ffdc413856f49d66e578 373 Pfam PF00266 Aminotransferase class-V 13 356 5.0E-38 T 14-10-2018 IPR000192 Aminotransferase class V domain VV1_1425 0aa522547880ffdc413856f49d66e578 373 SUPERFAMILY SSF53383 9 371 1.13E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_1425 0aa522547880ffdc413856f49d66e578 373 Gene3D G3DSA:3.40.640.10 22 270 5.3E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_1425 0aa522547880ffdc413856f49d66e578 373 Gene3D G3DSA:3.90.1150.10 9 369 5.3E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_0321 f6179552f9737368767d4a36a565b60b 331 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 1 330 1.4E-150 T 14-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain VV1_0064 1d3dfbbad055c08e0392a015dd6bb924 165 Gene3D G3DSA:3.30.160.60 3 60 5.3E-6 T 14-10-2018 VV2_0159 5eb648fbd93666aac4a219065168aed0 446 Pfam PF13584 Oxygen tolerance 69 299 1.4E-25 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD VV1_1802 acfc20221ba6145c90de78cd1cd26348 269 Pfam PF00899 ThiF family 23 263 4.9E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VV1_1802 acfc20221ba6145c90de78cd1cd26348 269 Gene3D G3DSA:3.40.50.720 5 269 1.6E-110 T 14-10-2018 VV1_1802 acfc20221ba6145c90de78cd1cd26348 269 SUPERFAMILY SSF69572 9 267 2.49E-65 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VV1_0395 1b0b604b62cdd014b6ce50534e5cd297 141 Pfam PF14350 Beta protein 11 130 3.1E-24 T 14-10-2018 IPR025683 Protein beta VV1_1938 2ba5fb45518aeef9ad6458df036d5503 441 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1938 2ba5fb45518aeef9ad6458df036d5503 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 1.8E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1938 2ba5fb45518aeef9ad6458df036d5503 441 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 438 6.1E-174 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1938 2ba5fb45518aeef9ad6458df036d5503 441 SMART SM00382 159 343 5.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1938 2ba5fb45518aeef9ad6458df036d5503 441 SUPERFAMILY SSF52540 95 363 2.1E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1938 2ba5fb45518aeef9ad6458df036d5503 441 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 436 6.9E-194 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VV1_1938 2ba5fb45518aeef9ad6458df036d5503 441 Gene3D G3DSA:3.40.50.12240 20 440 1.8E-156 T 14-10-2018 VV2_0861 a77c1f5622fc85859c62fe6774a90c44 96 Gene3D G3DSA:3.40.50.2300 1 91 1.6E-21 T 14-10-2018 VV2_0861 a77c1f5622fc85859c62fe6774a90c44 96 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 83 5.8E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_0861 a77c1f5622fc85859c62fe6774a90c44 96 SUPERFAMILY SSF52794 1 86 2.17E-22 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV2_0328 667ec14632ad0cd90314265fe2fc0064 228 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 1.4E-71 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 VV2_0328 667ec14632ad0cd90314265fe2fc0064 228 Gene3D G3DSA:1.10.3720.10 2 224 2.4E-60 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0328 667ec14632ad0cd90314265fe2fc0064 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 218 4.7E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_0328 667ec14632ad0cd90314265fe2fc0064 228 SUPERFAMILY SSF161098 6 218 4.32E-48 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2353 1741eee8d19cd369b748ce317379b2c8 387 SUPERFAMILY SSF56935 24 387 2.75E-28 T 14-10-2018 VV1_2353 1741eee8d19cd369b748ce317379b2c8 387 Gene3D G3DSA:2.40.160.10 161 381 1.4E-6 T 14-10-2018 IPR023614 Porin domain superfamily VV1_1914 8b981aa99a22b281e9f3763bb72523f3 68 Pfam PF11446 Protein of unknown function (DUF2897) 5 57 5.8E-22 T 14-10-2018 IPR021550 Protein of unknown function DUF2897 VV1_2168 da8ba56b3830ce7a3db2ceaf1470200d 146 Gene3D G3DSA:3.30.420.270 63 137 9.8E-19 T 14-10-2018 VV1_2168 da8ba56b3830ce7a3db2ceaf1470200d 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 5.2E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VV1_2168 da8ba56b3830ce7a3db2ceaf1470200d 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.183 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 Gene3D G3DSA:3.40.50.300 327 572 8.0E-76 T 14-10-2018 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 SUPERFAMILY SSF90123 7 318 5.1E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 SUPERFAMILY SSF52540 335 571 1.87E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 Pfam PF00005 ABC transporter 356 502 8.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 533 2.8E-136 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 Pfam PF00664 ABC transporter transmembrane region 24 285 1.4E-7 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 Gene3D G3DSA:1.20.1560.10 2 321 3.1E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV1_2812 faa19404a0cbd1c766b5f136d0d4d6fb 573 SMART SM00382 365 551 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1905 55c5bd6e46dfb94fe50912562e9fc064 191 Gene3D G3DSA:3.40.50.360 1 191 4.0E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1905 55c5bd6e46dfb94fe50912562e9fc064 191 SUPERFAMILY SSF52218 6 188 1.57E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1905 55c5bd6e46dfb94fe50912562e9fc064 191 Pfam PF03358 NADPH-dependent FMN reductase 49 136 1.7E-9 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VV1_1905 55c5bd6e46dfb94fe50912562e9fc064 191 ProSitePatterns PS00201 Flavodoxin signature. 9 25 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VV1_2238 38ca504fcfc001663b0ac07b6f1ee572 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.2E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VV2_0349 c437b5cbdb479940c2bb69795142eb4f 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 180 1.2E-27 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV2_0349 c437b5cbdb479940c2bb69795142eb4f 362 SUPERFAMILY SSF53901 7 325 2.09E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0349 c437b5cbdb479940c2bb69795142eb4f 362 Gene3D G3DSA:3.40.47.10 1 362 1.7E-152 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 VV2_0349 c437b5cbdb479940c2bb69795142eb4f 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.6E-36 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV2_0349 c437b5cbdb479940c2bb69795142eb4f 362 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 1.6E-111 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV2_0349 c437b5cbdb479940c2bb69795142eb4f 362 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 67.006 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VV1_0014 ec6faefa7afbe3e4b916797c931a970f 443 SUPERFAMILY SSF109604 23 441 3.7E-79 T 14-10-2018 VV1_0014 ec6faefa7afbe3e4b916797c931a970f 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 440 1.8E-128 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VV1_0014 ec6faefa7afbe3e4b916797c931a970f 443 Pfam PF01966 HD domain 66 150 4.9E-8 T 14-10-2018 IPR006674 HD domain VV1_0014 ec6faefa7afbe3e4b916797c931a970f 443 SMART SM00471 62 268 2.1E-8 T 14-10-2018 IPR003607 HD/PDEase domain VV1_0014 ec6faefa7afbe3e4b916797c931a970f 443 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 439 34.345 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VV1_0014 ec6faefa7afbe3e4b916797c931a970f 443 Pfam PF13286 Phosphohydrolase-associated domain 350 437 5.2E-26 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain VV1_1351 3fba9d6adeda795dfe253e4048d2c9d3 80 Pfam PF06005 Cell division protein ZapB 1 77 6.0E-24 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VV1_1351 3fba9d6adeda795dfe253e4048d2c9d3 80 Gene3D G3DSA:1.20.5.340 1 79 2.0E-28 T 14-10-2018 VV1_1351 3fba9d6adeda795dfe253e4048d2c9d3 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.654 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VV1_2957 604f2bdf890938d20a8b988b6312ebea 70 Pfam PF13006 Insertion element 4 transposase N-terminal 20 66 1.4E-7 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV1_2525 a7c4e1723869aa0fedb3ab17c2200ec8 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 2.8E-20 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV1_2525 a7c4e1723869aa0fedb3ab17c2200ec8 99 PIRSF PIRSF029218 1 97 1.8E-31 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 VV1_2525 a7c4e1723869aa0fedb3ab17c2200ec8 99 Gene3D G3DSA:3.30.2310.20 1 96 3.4E-27 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VV1_1755 71cd352d957b615305551ca1286ef9c3 495 SUPERFAMILY SSF52540 126 460 2.71E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1755 71cd352d957b615305551ca1286ef9c3 495 Pfam PF00437 Type II/IV secretion system protein 144 421 7.6E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_1755 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.30.450.380 23 239 7.3E-43 T 14-10-2018 VV1_1755 71cd352d957b615305551ca1286ef9c3 495 Gene3D G3DSA:3.40.50.300 240 459 4.5E-70 T 14-10-2018 VV2_1352 ed9da442205182dd4c63a02552e2ae5d 99 SUPERFAMILY SSF52794 2 94 6.8E-33 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV2_1352 ed9da442205182dd4c63a02552e2ae5d 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 7.7E-33 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VV2_1352 ed9da442205182dd4c63a02552e2ae5d 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 4.0E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV2_1352 ed9da442205182dd4c63a02552e2ae5d 99 Gene3D G3DSA:3.40.50.2300 1 98 9.2E-37 T 14-10-2018 VV1_2249 60fc863ad88cec37cfab11a3ac9238f7 484 Pfam PF01966 HD domain 294 428 2.4E-18 T 14-10-2018 IPR006674 HD domain VV1_2249 60fc863ad88cec37cfab11a3ac9238f7 484 SMART SM00471 288 438 1.5E-8 T 14-10-2018 IPR003607 HD/PDEase domain VV1_2249 60fc863ad88cec37cfab11a3ac9238f7 484 Gene3D G3DSA:1.10.3210.10 267 482 4.7E-77 T 14-10-2018 VV1_2249 60fc863ad88cec37cfab11a3ac9238f7 484 SUPERFAMILY SSF109604 268 466 7.22E-34 T 14-10-2018 VV2_0525 2b53927ebc2ed95cbe41d8285dd16781 210 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VV2_0525 2b53927ebc2ed95cbe41d8285dd16781 210 SUPERFAMILY SSF52833 28 208 3.74E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0525 2b53927ebc2ed95cbe41d8285dd16781 210 Pfam PF13462 Thioredoxin 50 203 1.4E-8 T 14-10-2018 IPR012336 Thioredoxin-like fold VV2_0525 2b53927ebc2ed95cbe41d8285dd16781 210 Gene3D G3DSA:3.40.30.10 25 209 5.3E-42 T 14-10-2018 VV2_1380 48c41e9a7397362c37e7c0d259be8134 250 Pfam PF10014 2OG-Fe dioxygenase 51 243 1.4E-61 T 14-10-2018 IPR018724 2OG-Fe dioxygenase VV2_1380 48c41e9a7397362c37e7c0d259be8134 250 Gene3D G3DSA:2.60.120.620 8 249 7.6E-79 T 14-10-2018 VV1_0684 de735ea7ce959ad09184ea8a1e11025a 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 7 260 9.6E-98 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VV1_0684 de735ea7ce959ad09184ea8a1e11025a 262 Pfam PF02405 Permease MlaE 47 258 3.3E-75 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VV2_0549 4a5c7e7358d54b3a3b7f7d38485fa848 432 Pfam PF00704 Glycosyl hydrolases family 18 25 416 2.0E-81 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VV2_0549 4a5c7e7358d54b3a3b7f7d38485fa848 432 Gene3D G3DSA:3.10.50.10 312 390 6.9E-120 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VV2_0549 4a5c7e7358d54b3a3b7f7d38485fa848 432 SUPERFAMILY SSF51445 19 417 3.37E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_0549 4a5c7e7358d54b3a3b7f7d38485fa848 432 Gene3D G3DSA:3.20.20.80 23 422 6.9E-120 T 14-10-2018 VV2_0549 4a5c7e7358d54b3a3b7f7d38485fa848 432 SMART SM00636 23 416 3.9E-106 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VV2_0549 4a5c7e7358d54b3a3b7f7d38485fa848 432 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VV2_0549 4a5c7e7358d54b3a3b7f7d38485fa848 432 SUPERFAMILY SSF54556 313 387 5.04E-18 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily VV1_1087 74a8506ebc253285dde7beaba080bcdd 325 Gene3D G3DSA:1.10.3720.10 84 314 9.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1087 74a8506ebc253285dde7beaba080bcdd 325 SUPERFAMILY SSF161098 89 302 2.35E-16 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1087 74a8506ebc253285dde7beaba080bcdd 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 3.0E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0148 ce0f4e7f0464b793fadb0b95a6779247 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VV1_0148 ce0f4e7f0464b793fadb0b95a6779247 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV1_0148 ce0f4e7f0464b793fadb0b95a6779247 758 Pfam PF07670 Nucleoside recognition 509 691 9.2E-37 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV1_0148 ce0f4e7f0464b793fadb0b95a6779247 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 7.3E-178 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VV1_0148 ce0f4e7f0464b793fadb0b95a6779247 758 Gene3D G3DSA:3.40.50.300 4 191 6.8E-43 T 14-10-2018 VV1_0148 ce0f4e7f0464b793fadb0b95a6779247 758 SUPERFAMILY SSF52540 4 181 7.14E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0148 ce0f4e7f0464b793fadb0b95a6779247 758 Pfam PF02421 Ferrous iron transport protein B 4 161 3.0E-58 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VV2_1505 558e28b3651f6bfedd48fb24ce109f18 508 Gene3D G3DSA:3.50.50.60 4 153 4.0E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1505 558e28b3651f6bfedd48fb24ce109f18 508 Gene3D G3DSA:3.50.50.60 280 296 1.2E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1505 558e28b3651f6bfedd48fb24ce109f18 508 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 77 1.5E-10 T 14-10-2018 VV2_1505 558e28b3651f6bfedd48fb24ce109f18 508 Gene3D G3DSA:3.50.50.60 223 279 1.2E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1505 558e28b3651f6bfedd48fb24ce109f18 508 SUPERFAMILY SSF51905 8 495 3.63E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1505 558e28b3651f6bfedd48fb24ce109f18 508 PRINTS PR00419 Adrenodoxin reductase family signature 10 32 5.6E-6 T 14-10-2018 VV2_1505 558e28b3651f6bfedd48fb24ce109f18 508 PRINTS PR00419 Adrenodoxin reductase family signature 33 46 5.6E-6 T 14-10-2018 VV2_0369 772758111cb7100fe3fc1033020b362c 107 SUPERFAMILY SSF50022 2 106 1.19E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VV2_0369 772758111cb7100fe3fc1033020b362c 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 6.8E-36 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VV2_0369 772758111cb7100fe3fc1033020b362c 107 Gene3D G3DSA:2.102.10.10 1 107 4.6E-32 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VV2_0369 772758111cb7100fe3fc1033020b362c 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.2E-39 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VV1_2099 f2bcb527f11689ab2187163e828ffd0f 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 2.5E-269 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 VV2_0178 629a27d2bd31831a30377b9e9f882a48 254 Pfam PF01909 Nucleotidyltransferase domain 46 84 6.1E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VV2_0178 629a27d2bd31831a30377b9e9f882a48 254 Gene3D G3DSA:3.30.460.10 18 122 3.4E-9 T 14-10-2018 VV2_0178 629a27d2bd31831a30377b9e9f882a48 254 SUPERFAMILY SSF81301 16 128 4.76E-13 T 14-10-2018 VV2_0975 d43f403ad820b72000fcdd5cc46d07ab 328 Gene3D G3DSA:3.40.50.720 2 313 1.3E-107 T 14-10-2018 VV2_0975 d43f403ad820b72000fcdd5cc46d07ab 328 SUPERFAMILY SSF51735 106 289 2.79E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0975 d43f403ad820b72000fcdd5cc46d07ab 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 320 1.5E-13 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VV2_0975 d43f403ad820b72000fcdd5cc46d07ab 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 1.7E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VV2_0975 d43f403ad820b72000fcdd5cc46d07ab 328 SUPERFAMILY SSF52283 1 124 7.02E-20 T 14-10-2018 VV2_0975 d43f403ad820b72000fcdd5cc46d07ab 328 Gene3D G3DSA:3.40.50.720 104 305 1.3E-107 T 14-10-2018 VV1_2787 088c280739b13cdf3b44536b2aa497db 255 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 255 45.563 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VV1_2787 088c280739b13cdf3b44536b2aa497db 255 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 4.8E-49 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VV1_0571 18f64cc67cc5d96267af27c635e1edb5 305 SUPERFAMILY SSF54211 3 125 1.67E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0571 18f64cc67cc5d96267af27c635e1edb5 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.3E-109 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VV1_0571 18f64cc67cc5d96267af27c635e1edb5 305 Gene3D G3DSA:3.30.1700.10 129 305 9.1E-71 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VV1_0571 18f64cc67cc5d96267af27c635e1edb5 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 8.0E-144 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VV1_0571 18f64cc67cc5d96267af27c635e1edb5 305 Gene3D G3DSA:3.30.230.20 1 128 3.2E-52 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VV1_0571 18f64cc67cc5d96267af27c635e1edb5 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.719 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VV1_0571 18f64cc67cc5d96267af27c635e1edb5 305 SUPERFAMILY SSF54211 134 278 3.49E-53 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VV1_0547 17363fdcef7a4d56c89a7bf17975f43d 160 SUPERFAMILY SSF89562 1 155 3.14E-47 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VV1_0547 17363fdcef7a4d56c89a7bf17975f43d 160 Pfam PF03737 Aldolase/RraA 5 152 2.9E-42 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VV1_0547 17363fdcef7a4d56c89a7bf17975f43d 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.1E-71 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VV1_0547 17363fdcef7a4d56c89a7bf17975f43d 160 Gene3D G3DSA:3.50.30.40 1 160 1.9E-64 T 14-10-2018 VV1_0964 4480756181764478d307f7e3a0a9884a 647 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 5.9E-219 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VV1_0964 4480756181764478d307f7e3a0a9884a 647 Gene3D G3DSA:3.20.20.540 214 527 2.4E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VV1_0964 4480756181764478d307f7e3a0a9884a 647 Pfam PF01964 Radical SAM ThiC family 144 592 2.6E-199 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VV1_0964 4480756181764478d307f7e3a0a9884a 647 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 100.023 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VV1_0964 4480756181764478d307f7e3a0a9884a 647 Pfam PF13667 ThiC-associated domain 22 104 3.1E-33 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VV1_2141 199eed60778610d86c172e491e8ece4f 266 Pfam PF02698 DUF218 domain 80 242 6.5E-27 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VV1_2970 ceb8f5563e651d65820e22d895366abd 1214 SUPERFAMILY SSF55486 294 670 3.42E-17 T 14-10-2018 VV1_2970 ceb8f5563e651d65820e22d895366abd 1214 Gene3D G3DSA:3.40.390.10 538 671 8.0E-6 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VV1_2970 ceb8f5563e651d65820e22d895366abd 1214 Pfam PF16313 Met-zincin 601 721 9.4E-9 T 14-10-2018 IPR032534 Domain of unknown function DUF4953 VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 33.083 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 PIRSF PIRSF006614 8 151 7.2E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 9.4E-65 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 SUPERFAMILY SSF52335 3 150 1.31E-58 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 Gene3D G3DSA:3.40.50.1380 1 151 1.3E-66 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 SMART SM00851 25 118 3.3E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 Pfam PF02142 MGS-like domain 25 118 5.4E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain VV2_0123 a1d0b65d779c4e600c4360cc6a0bd3be 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VV1_1731 c89d9926ac082ecd408f2e126b6173e7 782 Gene3D G3DSA:2.40.10.220 466 588 1.7E-6 T 14-10-2018 VV1_1731 c89d9926ac082ecd408f2e126b6173e7 782 SUPERFAMILY SSF141371 466 547 6.47E-6 T 14-10-2018 VV1_1731 c89d9926ac082ecd408f2e126b6173e7 782 SUPERFAMILY SSF141371 142 200 8.44E-5 T 14-10-2018 VV1_1731 c89d9926ac082ecd408f2e126b6173e7 782 Pfam PF07238 PilZ domain 145 233 1.9E-8 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VV1_1731 c89d9926ac082ecd408f2e126b6173e7 782 Pfam PF07238 PilZ domain 470 557 5.1E-10 T 14-10-2018 IPR009875 PilZ domain GO:0035438 VV2_0925 93870134c5e12d4af0fed4dfc414c824 546 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 405 439 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VV2_0925 93870134c5e12d4af0fed4dfc414c824 546 Pfam PF00924 Mechanosensitive ion channel 334 535 1.9E-42 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VV2_0925 93870134c5e12d4af0fed4dfc414c824 546 SUPERFAMILY SSF50182 376 441 7.19E-13 T 14-10-2018 IPR010920 LSM domain superfamily VV2_0925 93870134c5e12d4af0fed4dfc414c824 546 Gene3D G3DSA:2.30.30.60 392 441 3.4E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VV2_0925 93870134c5e12d4af0fed4dfc414c824 546 Gene3D G3DSA:3.30.70.100 442 537 2.5E-9 T 14-10-2018 VV2_0925 93870134c5e12d4af0fed4dfc414c824 546 SUPERFAMILY SSF82689 444 535 1.44E-6 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VV2_0925 93870134c5e12d4af0fed4dfc414c824 546 SUPERFAMILY SSF82861 291 374 2.09E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VV1_2802 15a31ed1fcc66399de0a4e74481c5d00 245 Pfam PF02698 DUF218 domain 58 182 6.4E-22 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VV1_1970 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 117 134 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VV1_1970 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 154 171 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VV1_1970 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 66 82 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VV1_1970 0262eb6376de35e562dd30baa4219add 262 PRINTS PR01805 VacJ lipoprotein signature 48 61 1.2E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VV1_1970 0262eb6376de35e562dd30baa4219add 262 Pfam PF04333 MlaA lipoprotein 48 238 1.1E-62 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VV1_1813 5fc8758370dbac7829e47cff4890cad1 197 Gene3D G3DSA:2.30.130.40 1 108 7.3E-28 T 14-10-2018 VV1_1813 5fc8758370dbac7829e47cff4890cad1 197 SUPERFAMILY SSF88697 3 186 8.2E-44 T 14-10-2018 IPR015947 PUA-like superfamily VV1_1813 5fc8758370dbac7829e47cff4890cad1 197 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 137 3.5E-15 T 14-10-2018 IPR003111 Lon, substrate-binding domain VV1_1886 2028626d0acc86571709fc854046902f 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.473 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 VV1_1886 2028626d0acc86571709fc854046902f 155 Pfam PF00075 RNase H 3 141 2.1E-53 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VV1_1886 2028626d0acc86571709fc854046902f 155 Gene3D G3DSA:3.30.420.10 1 155 2.4E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_1886 2028626d0acc86571709fc854046902f 155 SUPERFAMILY SSF53098 3 143 1.21E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2118 ae2cee3204ec2ff023e5f64dab97a6d6 741 SUPERFAMILY SSF53659 5 740 0.0 T 14-10-2018 VV1_2118 ae2cee3204ec2ff023e5f64dab97a6d6 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VV1_2118 ae2cee3204ec2ff023e5f64dab97a6d6 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VV1_2118 ae2cee3204ec2ff023e5f64dab97a6d6 741 Gene3D G3DSA:3.40.718.10 408 651 1.1E-10 T 14-10-2018 VV1_2118 ae2cee3204ec2ff023e5f64dab97a6d6 741 PIRSF PIRSF009407 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VV1_0373 78c6112f182800b48f1cb3e5e71de6de 86 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 53 7.0E-13 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VV1_0626 93b237097530b7d7265e97b7959c0d84 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 194 2.7E-72 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VV1_0626 93b237097530b7d7265e97b7959c0d84 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.708 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VV1_0626 93b237097530b7d7265e97b7959c0d84 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.9E-49 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VV1_0626 93b237097530b7d7265e97b7959c0d84 203 SMART SM01207 10 185 9.1E-82 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VV1_1256 12981dbac28edda3f9c02abd74954ce3 324 SUPERFAMILY SSF161111 30 229 2.75E-51 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VV1_1256 12981dbac28edda3f9c02abd74954ce3 324 Gene3D G3DSA:1.20.1510.10 30 228 1.7E-62 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VV1_1256 12981dbac28edda3f9c02abd74954ce3 324 Pfam PF01545 Cation efflux family 37 228 5.9E-44 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV1_1256 12981dbac28edda3f9c02abd74954ce3 324 Pfam PF16916 Dimerisation domain of Zinc Transporter 232 309 5.3E-25 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VV1_1256 12981dbac28edda3f9c02abd74954ce3 324 Gene3D G3DSA:3.30.70.1350 229 312 5.0E-30 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VV1_1256 12981dbac28edda3f9c02abd74954ce3 324 SUPERFAMILY SSF160240 232 310 3.79E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VV1_1256 12981dbac28edda3f9c02abd74954ce3 324 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 34 309 2.5E-70 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VV1_2093 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 PIRSF PIRSF006272 1 166 4.3E-76 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VV1_2093 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Gene3D G3DSA:1.10.287.680 1 53 6.7E-32 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VV1_2093 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 SUPERFAMILY SSF116960 1 166 1.83E-62 T 14-10-2018 VV1_2093 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 39.903 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VV1_2093 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-96 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VV1_2093 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Pfam PF03887 YfbU domain 1 166 5.8E-70 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VV1_2093 3510bcd459b9cc47a70d3cbaa0fa6ae6 166 Gene3D G3DSA:1.10.3190.10 54 166 2.7E-35 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VV1_3069 c1e686c9efbe52cbf38e4c8e67642ded 268 SUPERFAMILY SSF51366 1 266 3.77E-92 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VV1_3069 c1e686c9efbe52cbf38e4c8e67642ded 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.5E-104 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_3069 c1e686c9efbe52cbf38e4c8e67642ded 268 Gene3D G3DSA:3.20.20.70 1 268 1.1E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_3069 c1e686c9efbe52cbf38e4c8e67642ded 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_3069 c1e686c9efbe52cbf38e4c8e67642ded 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.1E-98 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_3069 c1e686c9efbe52cbf38e4c8e67642ded 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.113 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VV1_0311 f51a34e703d3cd6150b489732e0ac5b5 318 Gene3D G3DSA:3.30.1330.60 154 302 3.7E-53 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_0311 f51a34e703d3cd6150b489732e0ac5b5 318 Pfam PF00691 OmpA family 196 294 1.3E-18 T 14-10-2018 IPR006665 OmpA-like domain VV1_0311 f51a34e703d3cd6150b489732e0ac5b5 318 SUPERFAMILY SSF103088 183 300 8.76E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily VV1_0311 f51a34e703d3cd6150b489732e0ac5b5 318 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.8E-17 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain VV1_1400 67a3213daaa4a206685f76ca2a638194 220 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 9 220 2.1E-50 T 14-10-2018 IPR026387 Outer membrane protein VV1_1582 fa6905fe561da9aa6013787b756626e0 237 Gene3D G3DSA:3.90.550.10 2 235 7.8E-78 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_1582 fa6905fe561da9aa6013787b756626e0 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 231 1.6E-80 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VV1_1582 fa6905fe561da9aa6013787b756626e0 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VV1_1582 fa6905fe561da9aa6013787b756626e0 237 SUPERFAMILY SSF53448 8 231 2.62E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_1582 fa6905fe561da9aa6013787b756626e0 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 3.2E-77 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VV1_1582 fa6905fe561da9aa6013787b756626e0 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 43.86 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VV1_0182 c7c536ab91c44eb1b9e06129b4e085af 530 Gene3D G3DSA:3.40.50.720 379 527 5.1E-32 T 14-10-2018 VV1_0182 c7c536ab91c44eb1b9e06129b4e085af 530 Pfam PF02254 TrkA-N domain 388 504 3.9E-19 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VV1_0182 c7c536ab91c44eb1b9e06129b4e085af 530 Pfam PF00999 Sodium/hydrogen exchanger family 3 350 3.0E-35 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV1_0182 c7c536ab91c44eb1b9e06129b4e085af 530 SUPERFAMILY SSF51735 387 518 1.36E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0182 c7c536ab91c44eb1b9e06129b4e085af 530 Gene3D G3DSA:1.20.1530.20 2 362 5.6E-44 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VV2_0219 f812bfd55d1c799e8a9c02c4c04a8983 161 PIRSF PIRSF003174 1 157 1.7E-48 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VV2_0219 f812bfd55d1c799e8a9c02c4c04a8983 161 Pfam PF05981 CreA protein 24 146 4.8E-44 T 14-10-2018 IPR010292 Uncharacterised protein family CreA VV1_2588 33a24475eefbe65d7807e2c78aeade67 206 SUPERFAMILY SSF89155 3 192 6.28E-52 T 14-10-2018 IPR036411 TorD-like superfamily VV1_2588 33a24475eefbe65d7807e2c78aeade67 206 Gene3D G3DSA:1.10.3480.10 4 193 1.5E-40 T 14-10-2018 VV1_2588 33a24475eefbe65d7807e2c78aeade67 206 Pfam PF02613 Nitrate reductase delta subunit 42 156 1.2E-30 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 SUPERFAMILY SSF52172 5 144 6.69E-42 T 14-10-2018 IPR011006 CheY-like superfamily VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 SUPERFAMILY SSF55073 150 294 2.2E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 Gene3D G3DSA:3.40.50.2300 6 142 1.1E-38 T 14-10-2018 VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 Pfam PF00072 Response regulator receiver domain 10 121 3.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 SMART SM00448 8 121 5.5E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 Gene3D G3DSA:3.30.70.270 143 300 3.4E-47 T 14-10-2018 VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 292 8.8E-37 T 14-10-2018 IPR000160 GGDEF domain VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 SMART SM00267 134 296 2.3E-49 T 14-10-2018 IPR000160 GGDEF domain VV1_3127 f0d0f5882972a2ec42fdae5d85f6960d 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 295 1.0E-38 T 14-10-2018 IPR000160 GGDEF domain VV1_1753 df419180c3c95ed4f8f177bfae748a3b 171 Pfam PF07811 TadE-like protein 13 55 3.1E-8 T 14-10-2018 IPR012495 TadE-like VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 SMART SM00062 43 287 3.9E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 SUPERFAMILY SSF53955 265 468 6.91E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 Gene3D G3DSA:3.40.190.10 37 282 3.3E-66 T 14-10-2018 VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 494 47.982 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 328 356 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 286 5.9E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 Pfam PF01464 Transglycosylase SLT domain 318 419 4.1E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 Gene3D G3DSA:1.10.530.10 308 469 2.1E-33 T 14-10-2018 VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 Gene3D G3DSA:3.40.190.10 128 243 3.3E-66 T 14-10-2018 VV1_0341 d57ec6d5647e84d133e2bd499e15361d 529 SUPERFAMILY SSF53850 44 286 6.0E-33 T 14-10-2018 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 7.1E-46 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF51735 15 190 3.38E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 9.0E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 SUPERFAMILY SSF48179 191 343 6.89E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 8.0E-44 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:3.40.50.720 4 199 2.4E-51 T 14-10-2018 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.003 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 PIRSF PIRSF000114 9 344 2.5E-94 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 Gene3D G3DSA:1.10.1040.10 201 345 1.5E-53 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VV1_1277 7f9e4f0b1475144657a1c6c9ef550e53 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VV1_0100 8da9071996d55d33db3af59461b798ce 207 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 9 191 5.0E-20 T 14-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 VV1_0100 8da9071996d55d33db3af59461b798ce 207 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 117 2.6E-22 T 14-10-2018 IPR006531 Gp5 N-terminal VV1_0100 8da9071996d55d33db3af59461b798ce 207 SUPERFAMILY SSF69349 120 181 7.45E-5 T 14-10-2018 VV1_0100 8da9071996d55d33db3af59461b798ce 207 Gene3D G3DSA:2.40.50.230 3 87 2.2E-16 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VV2_0362 d5ea4f7aa362a9af4320113b6aca2ea6 185 Pfam PF01618 MotA/TolQ/ExbB proton channel family 65 178 2.0E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VV1_0250 a056b07319c48859e99eee69740ccd9d 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 5.0E-44 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VV1_0250 a056b07319c48859e99eee69740ccd9d 269 Gene3D G3DSA:1.25.40.10 174 265 8.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0250 a056b07319c48859e99eee69740ccd9d 269 SUPERFAMILY SSF48452 190 263 6.78E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_0250 a056b07319c48859e99eee69740ccd9d 269 Pfam PF13371 Tetratricopeptide repeat 187 259 4.8E-24 T 14-10-2018 VV1_1545 291c67763b3b2703d13096b9a8442179 230 Gene3D G3DSA:3.30.70.2970 41 148 8.4E-51 T 14-10-2018 VV1_1545 291c67763b3b2703d13096b9a8442179 230 Pfam PF04402 Protein of unknown function (DUF541) 30 227 1.4E-42 T 14-10-2018 IPR007497 Protein of unknown function DUF541 VV1_1545 291c67763b3b2703d13096b9a8442179 230 Gene3D G3DSA:3.30.110.170 31 227 8.4E-51 T 14-10-2018 VV2_0711 d8da923970102b9c50a899febf5ba0cb 343 SUPERFAMILY SSF56349 178 336 1.71E-34 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV2_0711 d8da923970102b9c50a899febf5ba0cb 343 Gene3D G3DSA:1.10.443.10 175 343 3.8E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV2_0711 d8da923970102b9c50a899febf5ba0cb 343 Pfam PF00589 Phage integrase family 179 254 5.4E-6 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV2_0711 d8da923970102b9c50a899febf5ba0cb 343 Pfam PF00589 Phage integrase family 285 326 3.6E-11 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV2_0671 912b9f05037ee77a2ac27d3ba54ad63b 329 Pfam PF01145 SPFH domain / Band 7 family 26 224 5.4E-23 T 14-10-2018 IPR001107 Band 7 domain VV2_0671 912b9f05037ee77a2ac27d3ba54ad63b 329 SMART SM00244 22 214 1.2E-17 T 14-10-2018 IPR001107 Band 7 domain VV2_0671 912b9f05037ee77a2ac27d3ba54ad63b 329 SUPERFAMILY SSF117892 55 219 3.66E-19 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily VV2_0671 912b9f05037ee77a2ac27d3ba54ad63b 329 TIGRFAM TIGR01932 hflC: HflC protein 9 316 4.4E-72 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VV2_0671 912b9f05037ee77a2ac27d3ba54ad63b 329 PIRSF PIRSF005651 1 323 5.7E-92 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VV1_3208 9e6cffd72cf03e406fda361e85c24fba 853 Pfam PF14516 AAA-like domain 14 244 5.4E-17 T 14-10-2018 VV1_3208 9e6cffd72cf03e406fda361e85c24fba 853 SUPERFAMILY SSF52540 23 246 2.46E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3208 9e6cffd72cf03e406fda361e85c24fba 853 Gene3D G3DSA:3.40.50.300 19 176 2.3E-5 T 14-10-2018 VV1_2825 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2825 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VV1_2825 7c5f0c7069a7d519a07c69a69acb7915 284 Pfam PF01380 SIS domain 124 252 2.0E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VV1_2825 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF53697 93 279 3.71E-40 T 14-10-2018 VV1_2825 7c5f0c7069a7d519a07c69a69acb7915 284 Gene3D G3DSA:3.40.50.10490 94 277 5.1E-40 T 14-10-2018 VV1_2825 7c5f0c7069a7d519a07c69a69acb7915 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1128 036254f8bc61c0c945159a9e1c565c52 233 Pfam PF04340 Protein of unknown function, DUF484 6 216 2.0E-70 T 14-10-2018 IPR007435 Protein of unknown function DUF484 VV1_1128 036254f8bc61c0c945159a9e1c565c52 233 Gene3D G3DSA:3.30.450.40 43 221 2.0E-36 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_2873 edb668ad9fa6697d0dbbe976e7590157 189 Pfam PF03352 Methyladenine glycosylase 10 185 8.5E-75 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VV1_2873 edb668ad9fa6697d0dbbe976e7590157 189 Gene3D G3DSA:1.10.340.30 5 189 2.1E-78 T 14-10-2018 VV1_2873 edb668ad9fa6697d0dbbe976e7590157 189 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 7 185 1.3E-70 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 VV1_2873 edb668ad9fa6697d0dbbe976e7590157 189 SUPERFAMILY SSF48150 6 187 5.41E-77 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VV2_1406 67a141f262dba3aa927f4d6b54803339 543 Pfam PF02018 Carbohydrate binding domain 21 135 5.2E-9 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 VV2_1406 67a141f262dba3aa927f4d6b54803339 543 SUPERFAMILY SSF54060 296 535 6.71E-49 T 14-10-2018 VV2_1406 67a141f262dba3aa927f4d6b54803339 543 SUPERFAMILY SSF49785 23 164 2.21E-29 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1406 67a141f262dba3aa927f4d6b54803339 543 Gene3D G3DSA:2.60.120.260 22 168 7.4E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_1406 67a141f262dba3aa927f4d6b54803339 543 Pfam PF04231 Endonuclease I 300 535 6.1E-101 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 VV1_0267 77aec108af2c099603b460975b4e537c 370 Gene3D G3DSA:3.40.50.300 117 323 4.7E-74 T 14-10-2018 VV1_0267 77aec108af2c099603b460975b4e537c 370 SUPERFAMILY SSF52540 119 320 5.23E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0267 77aec108af2c099603b460975b4e537c 370 Pfam PF02562 PhoH-like protein 120 323 7.2E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.8E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 SUPERFAMILY SSF46689 4 75 3.09E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 2.4E-13 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 Gene3D G3DSA:1.10.10.60 4 61 3.6E-21 T 14-10-2018 VV2_0601 d8ca926db1a700430c552e331e9d2c23 209 Gene3D G3DSA:1.10.357.10 63 204 3.3E-27 T 14-10-2018 VV2_0088 3bf3766929d303e34019567280644127 400 SUPERFAMILY SSF52540 150 341 1.79E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0088 3bf3766929d303e34019567280644127 400 Gene3D G3DSA:3.40.50.300 148 384 3.7E-14 T 14-10-2018 VV1_2927 21833bed7e16ded0bf5f62330d9342ca 205 Gene3D G3DSA:1.10.3890.10 1 205 8.5E-78 T 14-10-2018 IPR035932 HflD-like superfamily VV1_2927 21833bed7e16ded0bf5f62330d9342ca 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.984 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VV1_2927 21833bed7e16ded0bf5f62330d9342ca 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 9.3E-78 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD VV1_2927 21833bed7e16ded0bf5f62330d9342ca 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 2.0E-107 T 14-10-2018 VV1_2927 21833bed7e16ded0bf5f62330d9342ca 205 SUPERFAMILY SSF101322 2 204 1.2E-81 T 14-10-2018 IPR035932 HflD-like superfamily VV1_0306 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 103 288 4.1E-60 T 14-10-2018 VV1_0306 9e327cdb9c562b2cba980c003c810799 307 Pfam PF03466 LysR substrate binding domain 91 289 7.1E-37 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0306 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:3.40.190.10 163 261 4.1E-60 T 14-10-2018 VV1_0306 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF53850 92 294 6.7E-38 T 14-10-2018 VV1_0306 9e327cdb9c562b2cba980c003c810799 307 SUPERFAMILY SSF46785 3 85 4.54E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0306 9e327cdb9c562b2cba980c003c810799 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0306 9e327cdb9c562b2cba980c003c810799 307 Gene3D G3DSA:1.10.10.10 7 95 2.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0306 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0306 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0306 9e327cdb9c562b2cba980c003c810799 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_2922 adbfe73ec12ee4e5f4ee9abfd7a043b7 533 Pfam PF03553 Na+/H+ antiporter family 165 497 8.9E-106 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VV2_0263 e509bfa94d217f3e2b26bc43175e04a7 551 SUPERFAMILY SSF52540 227 407 2.13E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0263 e509bfa94d217f3e2b26bc43175e04a7 551 Pfam PF09818 Predicted ATPase of the ABC class 2 433 3.0E-181 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative VV1_0538 28d868338dec36669df36177e401de37 120 Pfam PF12065 Protein of unknown function (DUF3545) 60 119 2.3E-26 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 8.4E-129 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 Gene3D G3DSA:3.30.1130.10 21 138 3.4E-46 T 14-10-2018 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.316 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 Pfam PF14489 QueF-like protein 194 270 2.4E-27 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.2E-49 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 Gene3D G3DSA:3.30.1130.10 143 281 4.7E-62 T 14-10-2018 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 PIRSF PIRSF004750 6 281 2.6E-131 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VV1_0297 e97d76ace9669bfaa7cbdea6907008e0 281 SUPERFAMILY SSF55620 184 267 2.15E-10 T 14-10-2018 VV2_0053 05116d287d9bfcf3efe5e784c0db3a5b 335 SUPERFAMILY SSF53383 1 334 9.84E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0053 05116d287d9bfcf3efe5e784c0db3a5b 335 PIRSF PIRSF017617 1 334 1.6E-132 T 14-10-2018 IPR023603 Threonine aldolase VV2_0053 05116d287d9bfcf3efe5e784c0db3a5b 335 Pfam PF01212 Beta-eliminating lyase 2 283 4.5E-100 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VV2_0053 05116d287d9bfcf3efe5e784c0db3a5b 335 Gene3D G3DSA:3.40.640.10 1 243 7.2E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_0053 05116d287d9bfcf3efe5e784c0db3a5b 335 Gene3D G3DSA:3.90.1150.10 244 334 7.7E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_0044 c8b6c06ddd903946c7204d1097a083a4 485 Gene3D G3DSA:3.30.70.2150 208 316 4.5E-38 T 14-10-2018 VV2_0044 c8b6c06ddd903946c7204d1097a083a4 485 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 37 198 2.6E-33 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VV2_0044 c8b6c06ddd903946c7204d1097a083a4 485 Gene3D G3DSA:2.60.40.2550 317 414 6.9E-36 T 14-10-2018 VV2_0044 c8b6c06ddd903946c7204d1097a083a4 485 Gene3D G3DSA:2.70.50.50 24 201 2.6E-81 T 14-10-2018 VV2_0044 c8b6c06ddd903946c7204d1097a083a4 485 SUPERFAMILY SSF81296 24 202 3.08E-56 T 14-10-2018 IPR014756 Immunoglobulin E-set VV2_0044 c8b6c06ddd903946c7204d1097a083a4 485 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 485 61.232 T 14-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 VV2_1544 a887700e8e99fa0e6e10c85e32a45980 305 Pfam PF01476 LysM domain 42 85 4.4E-8 T 14-10-2018 IPR018392 LysM domain VV2_1544 a887700e8e99fa0e6e10c85e32a45980 305 SUPERFAMILY SSF54106 40 85 1.96E-7 T 14-10-2018 VV2_1544 a887700e8e99fa0e6e10c85e32a45980 305 Gene3D G3DSA:2.40.440.10 21 300 2.4E-82 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VV2_1544 a887700e8e99fa0e6e10c85e32a45980 305 SUPERFAMILY SSF141523 97 232 1.83E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VV2_1544 a887700e8e99fa0e6e10c85e32a45980 305 SMART SM00257 41 85 6.3E-5 T 14-10-2018 IPR018392 LysM domain VV2_1544 a887700e8e99fa0e6e10c85e32a45980 305 Pfam PF03734 L,D-transpeptidase catalytic domain 98 232 2.1E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VV2_1656 debb948746ef35afda3f068e616a24a6 280 SMART SM00342 195 277 2.0E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1656 debb948746ef35afda3f068e616a24a6 280 Pfam PF12852 Cupin 1 163 9.8E-33 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain VV2_1656 debb948746ef35afda3f068e616a24a6 280 SUPERFAMILY SSF46689 178 228 1.16E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1656 debb948746ef35afda3f068e616a24a6 280 Gene3D G3DSA:1.10.10.60 177 280 5.9E-23 T 14-10-2018 VV2_1656 debb948746ef35afda3f068e616a24a6 280 SUPERFAMILY SSF46689 231 279 9.41E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1656 debb948746ef35afda3f068e616a24a6 280 Pfam PF12833 Helix-turn-helix domain 201 278 1.7E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0826 caa6cd6beb8a4e605bb2e88e2451f56a 242 Gene3D G3DSA:3.40.190.10 103 201 8.3E-37 T 14-10-2018 VV2_0826 caa6cd6beb8a4e605bb2e88e2451f56a 242 Gene3D G3DSA:3.40.190.10 28 239 8.3E-37 T 14-10-2018 VV2_0826 caa6cd6beb8a4e605bb2e88e2451f56a 242 SMART SM00062 19 242 5.8E-5 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV2_0826 caa6cd6beb8a4e605bb2e88e2451f56a 242 SUPERFAMILY SSF53850 26 240 8.69E-39 T 14-10-2018 VV2_0826 caa6cd6beb8a4e605bb2e88e2451f56a 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 240 2.1E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_0595 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 105 129 9.6E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VV1_0595 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 191 210 9.6E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VV1_0595 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 42 61 9.6E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VV1_0595 55ce84a55994a23a86002adb8008ea26 245 PRINTS PR00603 Cytochrome C1 signature 210 225 9.6E-8 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VV1_0595 55ce84a55994a23a86002adb8008ea26 245 SUPERFAMILY SSF46626 17 208 1.72E-49 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_0595 55ce84a55994a23a86002adb8008ea26 245 Pfam PF02167 Cytochrome C1 family 34 244 3.6E-17 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VV1_0595 55ce84a55994a23a86002adb8008ea26 245 Gene3D G3DSA:1.10.760.10 26 210 1.1E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 SMART SM00020 29 280 6.0E-32 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 1.8E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 227 239 1.8E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 129 143 1.8E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 Gene3D G3DSA:2.40.10.10 22 284 4.1E-48 T 14-10-2018 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 Pfam PF00089 Trypsin 57 280 2.8E-33 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 SUPERFAMILY SSF50494 14 287 2.02E-52 T 14-10-2018 IPR009003 Peptidase S1, PA clan VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VV2_0191 1099acdbf67b8d1a19965547d58d536f 364 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 228 239 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VV1_1167 5bf625ac2dcb8d2d8f68effcf8b0b15a 270 Gene3D G3DSA:3.40.50.150 11 256 4.4E-18 T 14-10-2018 VV1_1167 5bf625ac2dcb8d2d8f68effcf8b0b15a 270 SUPERFAMILY SSF53335 17 252 5.65E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1167 5bf625ac2dcb8d2d8f68effcf8b0b15a 270 PIRSF PIRSF028177 3 270 7.4E-66 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VV1_1167 5bf625ac2dcb8d2d8f68effcf8b0b15a 270 Pfam PF04072 Leucine carboxyl methyltransferase 72 226 2.8E-7 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VV1_2096 318924e96c829b2353e7ba5b5b47e5bf 626 SMART SM00283 364 618 1.5E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2096 318924e96c829b2353e7ba5b5b47e5bf 626 SMART SM00304 295 349 1.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2096 318924e96c829b2353e7ba5b5b47e5bf 626 SMART SM00304 566 622 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_2096 318924e96c829b2353e7ba5b5b47e5bf 626 SUPERFAMILY SSF58104 315 625 4.1E-64 T 14-10-2018 VV1_2096 318924e96c829b2353e7ba5b5b47e5bf 626 Gene3D G3DSA:1.10.287.950 295 610 2.1E-66 T 14-10-2018 VV1_2096 318924e96c829b2353e7ba5b5b47e5bf 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 591 4.7E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1782 65cd75a32cf337ed467d77c0428f555c 483 Gene3D G3DSA:3.40.50.20 205 291 2.8E-6 T 14-10-2018 VV1_1782 65cd75a32cf337ed467d77c0428f555c 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 8.0E-10 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VV1_1782 65cd75a32cf337ed467d77c0428f555c 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 5.0E-44 T 14-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain VV1_1782 65cd75a32cf337ed467d77c0428f555c 483 Gene3D G3DSA:3.30.470.20 361 473 1.0E-18 T 14-10-2018 VV1_1782 65cd75a32cf337ed467d77c0428f555c 483 Gene3D G3DSA:3.30.1490.20 293 359 1.3E-5 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VV1_1782 65cd75a32cf337ed467d77c0428f555c 483 SUPERFAMILY SSF56059 268 476 1.41E-40 T 14-10-2018 VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 Gene3D G3DSA:3.20.20.140 2 247 1.3E-42 T 14-10-2018 VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 SMART SM00481 4 73 5.3E-4 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1003 1.3E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 Pfam PF14579 Helix-hairpin-helix motif 768 854 2.0E-11 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 1.5E-155 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 Pfam PF02811 PHP domain 8 101 4.7E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 6.8E-145 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_2989 c8bfaa61a04e1162087e4d0c23062d80 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.53 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV2_1101 cf82207ae4e4880f85a4e747b4cbcd8f 386 Gene3D G3DSA:1.10.3720.10 162 377 1.4E-21 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1101 cf82207ae4e4880f85a4e747b4cbcd8f 386 SUPERFAMILY SSF161098 169 362 1.57E-22 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1101 cf82207ae4e4880f85a4e747b4cbcd8f 386 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 78 1.5E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VV2_1101 cf82207ae4e4880f85a4e747b4cbcd8f 386 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 379 1.5E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_0681 074a4ca3104fcbbf0371052440efd788 341 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 160 328 2.1E-14 T 14-10-2018 IPR026337 HEXXH motif domain VV1_2341 95995e4452414c9826603fb2672aa628 195 Pfam PF02525 Flavodoxin-like fold 3 190 2.2E-43 T 14-10-2018 IPR003680 Flavodoxin-like fold VV1_2341 95995e4452414c9826603fb2672aa628 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.659 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VV1_2341 95995e4452414c9826603fb2672aa628 195 SUPERFAMILY SSF52218 1 193 2.02E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_2341 95995e4452414c9826603fb2672aa628 195 Gene3D G3DSA:3.40.50.360 1 195 6.2E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV2_0892 f7d8084bc9c0f741cf150276701bf57e 157 Pfam PF01230 HIT domain 19 111 2.2E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein VV2_0892 f7d8084bc9c0f741cf150276701bf57e 157 ProSitePatterns PS00892 HIT domain signature. 90 108 - T 14-10-2018 IPR019808 Histidine triad, conserved site VV2_0892 f7d8084bc9c0f741cf150276701bf57e 157 SUPERFAMILY SSF54197 5 147 9.5E-33 T 14-10-2018 IPR036265 HIT-like superfamily VV2_0892 f7d8084bc9c0f741cf150276701bf57e 157 Gene3D G3DSA:3.30.428.10 1 147 1.2E-31 T 14-10-2018 IPR036265 HIT-like superfamily VV1_0814 6ef0845c3c45e3eb7c6bfbf9b26188b4 236 SUPERFAMILY SSF56112 44 192 2.97E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV1_0814 6ef0845c3c45e3eb7c6bfbf9b26188b4 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 2.2E-79 T 14-10-2018 VV1_0814 6ef0845c3c45e3eb7c6bfbf9b26188b4 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 44.264 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VV1_0814 6ef0845c3c45e3eb7c6bfbf9b26188b4 236 Gene3D G3DSA:1.10.510.10 136 236 4.2E-14 T 14-10-2018 VV2_0814 4cc2635225a59b8cfde9c6ccc5f05647 168 Pfam PF04170 NlpE N-terminal domain 74 158 1.6E-32 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE VV2_0814 4cc2635225a59b8cfde9c6ccc5f05647 168 Gene3D G3DSA:2.40.128.640 61 168 8.8E-43 T 14-10-2018 VV1_1526 fb94ce4335a824390915b33906938c9b 345 Gene3D G3DSA:3.40.50.300 101 344 1.4E-102 T 14-10-2018 VV1_1526 fb94ce4335a824390915b33906938c9b 345 Gene3D G3DSA:3.30.450.90 1 100 3.7E-36 T 14-10-2018 VV1_1526 fb94ce4335a824390915b33906938c9b 345 Pfam PF00437 Type II/IV secretion system protein 12 270 4.2E-46 T 14-10-2018 IPR001482 Type II/IV secretion system protein VV1_1526 fb94ce4335a824390915b33906938c9b 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 1.4E-152 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VV1_1526 fb94ce4335a824390915b33906938c9b 345 SUPERFAMILY SSF52540 5 335 1.59E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1526 fb94ce4335a824390915b33906938c9b 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein VV2_0415 2ff935ed9bbd6b9720febe69c68f4b17 167 Gene3D G3DSA:2.180.10.10 1 66 1.8E-28 T 14-10-2018 VV2_0415 2ff935ed9bbd6b9720febe69c68f4b17 167 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 4 66 9.9E-29 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VV2_0415 2ff935ed9bbd6b9720febe69c68f4b17 167 PRINTS PR00394 RHS protein signature 34 53 1.4E-11 T 14-10-2018 IPR001826 RHS protein VV2_0415 2ff935ed9bbd6b9720febe69c68f4b17 167 PRINTS PR00394 RHS protein signature 11 31 1.4E-11 T 14-10-2018 IPR001826 RHS protein VV2_1564 6bcf4aa5c65114f4f0984d66b37a63b2 156 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 2.5E-34 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 VV2_1639 597639b19adf47dfa014c853e2a07330 185 Gene3D G3DSA:3.40.630.30 2 174 1.3E-41 T 14-10-2018 VV2_1639 597639b19adf47dfa014c853e2a07330 185 Pfam PF13302 Acetyltransferase (GNAT) domain 29 149 1.7E-21 T 14-10-2018 IPR000182 GNAT domain VV2_1639 597639b19adf47dfa014c853e2a07330 185 SUPERFAMILY SSF55729 6 173 2.86E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0431 f9f890fd577dfff2026b1c7da4fc8c9e 322 Pfam PF06996 Type VI secretion, TssG 12 307 3.9E-65 T 14-10-2018 IPR010732 Type VI secretion, TssG-like VV2_0431 f9f890fd577dfff2026b1c7da4fc8c9e 322 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 11 307 3.3E-58 T 14-10-2018 IPR010732 Type VI secretion, TssG-like VV1_1689 0732f18b9450034e563fe892628b5ae4 209 PIRSF PIRSF005461 1 209 1.1E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VV1_1689 0732f18b9450034e563fe892628b5ae4 209 Gene3D G3DSA:3.40.50.150 30 209 2.7E-60 T 14-10-2018 VV1_1689 0732f18b9450034e563fe892628b5ae4 209 SUPERFAMILY SSF53335 30 209 1.1E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1689 0732f18b9450034e563fe892628b5ae4 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.651 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VV1_1689 0732f18b9450034e563fe892628b5ae4 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 5.8E-57 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VV2_0187 0023990453c09341fbc8f3bf820af867 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.7E-51 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VV2_0187 0023990453c09341fbc8f3bf820af867 126 SUPERFAMILY SSF51230 3 125 9.16E-45 T 14-10-2018 IPR011053 Single hybrid motif VV2_0187 0023990453c09341fbc8f3bf820af867 126 Pfam PF01597 Glycine cleavage H-protein 5 125 4.4E-50 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VV2_0187 0023990453c09341fbc8f3bf820af867 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.518 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VV2_0187 0023990453c09341fbc8f3bf820af867 126 Gene3D G3DSA:2.40.50.100 1 126 7.7E-51 T 14-10-2018 VV1_0581 aa07ac3c696cca72cca4e2dd28ea3881 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0581 aa07ac3c696cca72cca4e2dd28ea3881 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0581 aa07ac3c696cca72cca4e2dd28ea3881 360 Pfam PF00953 Glycosyl transferase family 4 99 283 1.6E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VV1_0581 aa07ac3c696cca72cca4e2dd28ea3881 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.2E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0581 aa07ac3c696cca72cca4e2dd28ea3881 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.37 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0581 aa07ac3c696cca72cca4e2dd28ea3881 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 4.9E-157 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1668 35fea38b34de1620e56597648dfa62a7 573 Gene3D G3DSA:1.50.10.10 94 572 2.6E-225 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VV1_1668 35fea38b34de1620e56597648dfa62a7 573 Gene3D G3DSA:2.60.40.10 1 93 1.3E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1668 35fea38b34de1620e56597648dfa62a7 573 SUPERFAMILY SSF81296 2 90 4.13E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set VV1_1668 35fea38b34de1620e56597648dfa62a7 573 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 7.1E-9 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VV1_1668 35fea38b34de1620e56597648dfa62a7 573 Pfam PF00759 Glycosyl hydrolase family 9 98 500 9.5E-24 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VV1_1668 35fea38b34de1620e56597648dfa62a7 573 SUPERFAMILY SSF48208 78 566 1.97E-94 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VV2_0700 c6bb091e139cb65c3c4c77cbf71ac599 333 Gene3D G3DSA:3.40.710.10 31 331 4.8E-76 T 14-10-2018 VV2_0700 c6bb091e139cb65c3c4c77cbf71ac599 333 Pfam PF13354 Beta-lactamase enzyme family 60 303 1.7E-47 T 14-10-2018 VV2_0700 c6bb091e139cb65c3c4c77cbf71ac599 333 PRINTS PR00118 Beta-lactamase class A signature 39 63 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV2_0700 c6bb091e139cb65c3c4c77cbf71ac599 333 PRINTS PR00118 Beta-lactamase class A signature 151 175 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV2_0700 c6bb091e139cb65c3c4c77cbf71ac599 333 PRINTS PR00118 Beta-lactamase class A signature 115 140 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV2_0700 c6bb091e139cb65c3c4c77cbf71ac599 333 PRINTS PR00118 Beta-lactamase class A signature 70 87 4.2E-18 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VV2_0700 c6bb091e139cb65c3c4c77cbf71ac599 333 SUPERFAMILY SSF56601 36 329 2.65E-61 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 SUPERFAMILY SSF47240 4 157 4.06E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 39 55 3.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 3.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 63 79 3.8E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00818 Dps protein family signature 1. 39 55 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 Pfam PF00210 Ferritin-like domain 19 157 4.4E-25 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 ProSitePatterns PS00819 Dps protein family signature 2. 65 79 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 Gene3D G3DSA:1.20.1260.10 1 157 1.5E-54 T 14-10-2018 IPR012347 Ferritin-like VV1_2296 2eb5f09127002aa6b25a3b0c2096e5d3 157 PIRSF PIRSF005900 1 157 1.6E-44 T 14-10-2018 IPR002177 DNA-binding protein Dps VV1_2645 64814b7c0eaefcafceec4c16bdc4a58c 157 Gene3D G3DSA:3.30.450.40 2 157 5.4E-62 T 14-10-2018 IPR029016 GAF-like domain superfamily VV1_2645 64814b7c0eaefcafceec4c16bdc4a58c 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site VV1_2645 64814b7c0eaefcafceec4c16bdc4a58c 157 Pfam PF13185 GAF domain 31 145 1.3E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 VV1_2645 64814b7c0eaefcafceec4c16bdc4a58c 157 SUPERFAMILY SSF55781 5 145 3.36E-39 T 14-10-2018 VV1_0327 0ce473eeeac3bec26624c99b6b15dcef 129 Pfam PF07417 Transcriptional regulator Crl 6 123 1.3E-47 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VV1_0327 0ce473eeeac3bec26624c99b6b15dcef 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 30.928 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VV1_0327 0ce473eeeac3bec26624c99b6b15dcef 129 Gene3D G3DSA:3.30.310.230 2 128 6.9E-43 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VV2_1651 5ff22a74366ae19f69a9e0078dc9c2e9 182 Pfam PF12464 Maltose acetyltransferase 6 55 4.3E-9 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VV2_1651 5ff22a74366ae19f69a9e0078dc9c2e9 182 SMART SM01266 4 56 6.3E-15 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VV2_1651 5ff22a74366ae19f69a9e0078dc9c2e9 182 SUPERFAMILY SSF51161 2 181 7.07E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV2_1651 5ff22a74366ae19f69a9e0078dc9c2e9 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 3.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat VV2_1651 5ff22a74366ae19f69a9e0078dc9c2e9 182 Gene3D G3DSA:2.160.10.10 1 182 1.5E-63 T 14-10-2018 VV2_0070 892cf1a5144bef27478fef2f35c74e8d 182 SUPERFAMILY SSF55729 3 155 2.74E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0070 892cf1a5144bef27478fef2f35c74e8d 182 Gene3D G3DSA:3.40.630.30 4 169 1.3E-25 T 14-10-2018 VV2_0070 892cf1a5144bef27478fef2f35c74e8d 182 Pfam PF00583 Acetyltransferase (GNAT) family 45 138 2.3E-15 T 14-10-2018 IPR000182 GNAT domain VV1_1702 69512ae896ae0c098c057c5bec0d4818 1185 Pfam PF05488 PAAR motif 23 91 9.7E-23 T 14-10-2018 IPR008727 PAAR motif VV1_1702 69512ae896ae0c098c057c5bec0d4818 1185 Gene3D G3DSA:2.60.200.60 59 100 2.1E-11 T 14-10-2018 VV1_1702 69512ae896ae0c098c057c5bec0d4818 1185 Gene3D G3DSA:2.60.200.60 2 58 8.8E-13 T 14-10-2018 VV1_0086 6aee4412878375b215588942a552decc 68 Pfam PF05489 Phage Tail Protein X 3 57 2.7E-11 T 14-10-2018 IPR008861 Phage Tail Protein X-like VV1_0086 6aee4412878375b215588942a552decc 68 Gene3D G3DSA:3.10.350.10 2 68 1.8E-19 T 14-10-2018 IPR036779 LysM domain superfamily VV1_2007 2da4f53b323ffb1925e9d5c6b4dc5bda 344 PIRSF PIRSF028696 11 344 6.1E-139 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VV1_2007 2da4f53b323ffb1925e9d5c6b4dc5bda 344 Pfam PF11059 Protein of unknown function (DUF2860) 44 343 3.7E-106 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 VV1_2142 cef5cba74220edfc6d6b6b960851266b 269 SUPERFAMILY SSF53335 12 257 3.41E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2142 cef5cba74220edfc6d6b6b960851266b 269 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 9 265 40.788 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VV1_2142 cef5cba74220edfc6d6b6b960851266b 269 Pfam PF13847 Methyltransferase domain 53 160 8.7E-12 T 14-10-2018 IPR025714 Methyltransferase domain VV1_2142 cef5cba74220edfc6d6b6b960851266b 269 Gene3D G3DSA:3.40.50.150 15 269 1.0E-57 T 14-10-2018 VV1_0053 fca444d775cea8815c02b6245386248c 514 SUPERFAMILY SSF48557 4 511 6.28E-173 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 VV1_0053 fca444d775cea8815c02b6245386248c 514 Gene3D G3DSA:1.10.275.10 9 203 4.4E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal VV1_0053 fca444d775cea8815c02b6245386248c 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VV1_0053 fca444d775cea8815c02b6245386248c 514 Gene3D G3DSA:1.20.200.10 204 511 1.4E-103 T 14-10-2018 VV1_0053 fca444d775cea8815c02b6245386248c 514 Pfam PF00221 Aromatic amino acid lyase 16 466 6.6E-163 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VV1_2088 d0139f6d226f65c340262d74509c4ab3 251 Pfam PF02348 Cytidylyltransferase 5 221 4.3E-68 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VV1_2088 d0139f6d226f65c340262d74509c4ab3 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 9.8E-116 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VV1_2088 d0139f6d226f65c340262d74509c4ab3 251 Gene3D G3DSA:3.90.550.10 1 250 2.4E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2088 d0139f6d226f65c340262d74509c4ab3 251 SUPERFAMILY SSF53448 3 246 1.31E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2088 d0139f6d226f65c340262d74509c4ab3 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 47.566 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VV2_0139 6298ec1b98ce87362478e4eb62d072f5 548 PIRSF PIRSF011521 2 546 4.1E-276 T 14-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB VV2_0139 6298ec1b98ce87362478e4eb62d072f5 548 SUPERFAMILY SSF48452 172 316 1.37E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0139 6298ec1b98ce87362478e4eb62d072f5 548 Gene3D G3DSA:1.25.40.10 131 302 1.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_0139 6298ec1b98ce87362478e4eb62d072f5 548 SUPERFAMILY SSF52172 7 143 1.27E-19 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0139 6298ec1b98ce87362478e4eb62d072f5 548 SMART SM00448 9 127 2.0E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0139 6298ec1b98ce87362478e4eb62d072f5 548 Gene3D G3DSA:3.40.50.2300 5 130 1.7E-16 T 14-10-2018 VV2_0139 6298ec1b98ce87362478e4eb62d072f5 548 Pfam PF00072 Response regulator receiver domain 11 127 7.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_0878 69dd7f9c85efa1294124a483a7aa91ed 309 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 35 309 6.6E-81 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VV1_0878 69dd7f9c85efa1294124a483a7aa91ed 309 SUPERFAMILY SSF50156 213 308 3.06E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 VV1_0878 69dd7f9c85efa1294124a483a7aa91ed 309 Gene3D G3DSA:2.30.30.830 112 179 2.6E-28 T 14-10-2018 VV1_0878 69dd7f9c85efa1294124a483a7aa91ed 309 Pfam PF11356 Type II secretion system protein C 37 178 3.0E-41 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal VV1_0878 69dd7f9c85efa1294124a483a7aa91ed 309 Gene3D G3DSA:2.30.42.10 206 309 1.7E-27 T 14-10-2018 VV2_1007 31b2397161b7f12868b2f0a43d0f6f1b 423 Gene3D G3DSA:1.20.1600.10 26 422 1.9E-76 T 14-10-2018 VV2_1007 31b2397161b7f12868b2f0a43d0f6f1b 423 Pfam PF02321 Outer membrane efflux protein 230 407 6.0E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV2_1007 31b2397161b7f12868b2f0a43d0f6f1b 423 Pfam PF02321 Outer membrane efflux protein 28 204 3.4E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV2_1007 31b2397161b7f12868b2f0a43d0f6f1b 423 SUPERFAMILY SSF56954 4 412 2.62E-76 T 14-10-2018 VV1_0623 e64deb84188c91ea4b6037c064f99b4b 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 4.0E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VV1_0623 e64deb84188c91ea4b6037c064f99b4b 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 9.6E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VV1_0623 e64deb84188c91ea4b6037c064f99b4b 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.608 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 Pfam PF17200 Single Cache domain 2 45 192 6.6E-45 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 Gene3D G3DSA:3.30.450.20 28 203 1.1E-48 T 14-10-2018 VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 SUPERFAMILY SSF55874 322 443 2.49E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 SMART SM01049 42 133 4.8E-33 T 14-10-2018 IPR033480 Single Cache domain 2 VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 Gene3D G3DSA:3.30.565.10 313 447 4.4E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 Pfam PF07730 Histidine kinase 250 315 3.7E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 445 2.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 SMART SM00387 353 447 3.5E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2240 32fe3739ce5b7c432be92fe9d2ea13ca 451 PIRSF PIRSF037314 1 451 5.3E-184 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS VV2_0394 370a65d280c3a7cb756fa9f79dca39d1 194 Gene3D G3DSA:1.10.10.10 135 193 1.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_0394 370a65d280c3a7cb756fa9f79dca39d1 194 SMART SM01012 133 188 2.0E-17 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 VV2_0394 370a65d280c3a7cb756fa9f79dca39d1 194 SUPERFAMILY SSF52172 3 188 1.49E-21 T 14-10-2018 IPR011006 CheY-like superfamily VV2_0394 370a65d280c3a7cb756fa9f79dca39d1 194 Pfam PF03861 ANTAR domain 137 188 8.0E-16 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 VV1_2636 a573fec0205ea56d172e611d6cc80085 180 PIRSF PIRSF010252 1 178 5.8E-69 T 14-10-2018 IPR009809 Cell division protein ZapC VV1_2636 a573fec0205ea56d172e611d6cc80085 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.996 T 14-10-2018 IPR009809 Cell division protein ZapC VV1_2636 a573fec0205ea56d172e611d6cc80085 180 Pfam PF07126 Cell-division protein ZapC 1 168 3.6E-63 T 14-10-2018 IPR009809 Cell division protein ZapC VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 Gene3D G3DSA:3.40.50.300 1 139 4.7E-49 T 14-10-2018 VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 328 1.8E-34 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 Gene3D G3DSA:1.10.8.60 142 212 1.2E-18 T 14-10-2018 VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 Gene3D G3DSA:1.20.272.10 213 338 1.2E-39 T 14-10-2018 VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 330 7.9E-107 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 SUPERFAMILY SSF52540 1 208 6.37E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 9.3E-50 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VV1_0275 4767f8a46a6d9956dfecc50d3d06b033 341 SUPERFAMILY SSF48019 211 332 2.89E-30 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VV1_3143 3716a346bc8db36f6607e7aa50396dba 562 Pfam PF16130 Domain of unknown function (DUF4842) 348 550 3.3E-48 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 VV1_3143 3716a346bc8db36f6607e7aa50396dba 562 TIGRFAM TIGR04456 LruC_dom: LruC domain 315 551 2.8E-69 T 14-10-2018 IPR031025 LruC domain VV2_0273 074663bb9f278273249241e6928ca965 247 SUPERFAMILY SSF88713 5 245 1.11E-92 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VV2_0273 074663bb9f278273249241e6928ca965 247 Pfam PF03746 LamB/YcsF family 6 244 4.3E-97 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VV2_0273 074663bb9f278273249241e6928ca965 247 Gene3D G3DSA:3.20.20.370 4 247 2.1E-100 T 14-10-2018 VV2_0273 074663bb9f278273249241e6928ca965 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 247 41.335 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VV1_1367 e4340eee6755b04170050bccc2ce3e50 203 Gene3D G3DSA:1.10.10.10 25 113 8.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1367 e4340eee6755b04170050bccc2ce3e50 203 SUPERFAMILY SSF46785 27 200 5.32E-45 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1367 e4340eee6755b04170050bccc2ce3e50 203 Pfam PF10400 Virulence activator alpha C-term 116 200 1.0E-15 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal VV1_1367 e4340eee6755b04170050bccc2ce3e50 203 Pfam PF03551 Transcriptional regulator PadR-like family 31 104 1.4E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 8.3E-27 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 PRINTS PR01002 Flagellar protein FlgJ signature 221 242 8.3E-27 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 8.3E-27 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 PRINTS PR01002 Flagellar protein FlgJ signature 243 264 8.3E-27 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 PRINTS PR01002 Flagellar protein FlgJ signature 286 304 8.3E-27 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 PRINTS PR01002 Flagellar protein FlgJ signature 180 198 8.3E-27 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 Gene3D G3DSA:1.10.530.10 161 299 7.0E-46 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 303 4.1E-111 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 Gene3D G3DSA:2.10.70.40 195 246 7.0E-46 T 14-10-2018 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 SMART SM00047 146 305 1.3E-50 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 167 303 2.6E-21 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VV1_0218 6c94e542c06d2b6a340b3abdb63e6d84 306 Pfam PF10135 Rod binding protein 53 102 8.3E-14 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 Gene3D G3DSA:3.40.50.300 2 222 1.1E-71 T 14-10-2018 VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 Pfam PF00271 Helicase conserved C-terminal domain 243 351 4.2E-30 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.391 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 SMART SM00490 270 351 1.3E-31 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.3E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 Gene3D G3DSA:3.40.50.300 229 407 9.9E-46 T 14-10-2018 VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 SUPERFAMILY SSF52540 85 364 1.11E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0939 e08c8d9727f187981f8c64a08653d5ac 435 SMART SM00487 28 234 3.1E-54 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_1163 175909896237e14546ba1c7813aafe1d 183 SUPERFAMILY SSF64288 11 178 6.2E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VV1_1163 175909896237e14546ba1c7813aafe1d 183 Gene3D G3DSA:3.40.1410.10 14 178 5.0E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VV1_1163 175909896237e14546ba1c7813aafe1d 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 25.085 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VV1_1163 175909896237e14546ba1c7813aafe1d 183 Pfam PF04345 Chorismate lyase 16 182 5.8E-54 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VV1_1982 58e9cbaa7517e114413d5ecde4b9bd3f 214 Pfam PF03458 UPF0126 domain 12 83 1.1E-18 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VV1_1982 58e9cbaa7517e114413d5ecde4b9bd3f 214 Pfam PF03458 UPF0126 domain 99 170 1.0E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VV1_1752 bddff563eb6aef25bdafaa8bdee51689 150 Pfam PF07811 TadE-like protein 17 59 5.6E-10 T 14-10-2018 IPR012495 TadE-like VV1_0731 a830760b687bfbc437a1f36b9012b52f 290 SUPERFAMILY SSF103481 44 141 2.09E-13 T 14-10-2018 VV1_0731 a830760b687bfbc437a1f36b9012b52f 290 Pfam PF00892 EamA-like transporter family 143 268 2.2E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0731 a830760b687bfbc437a1f36b9012b52f 290 Pfam PF00892 EamA-like transporter family 7 137 1.3E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_0731 a830760b687bfbc437a1f36b9012b52f 290 SUPERFAMILY SSF103481 178 268 1.57E-13 T 14-10-2018 VV1_1873 02798cc8dbc833a415a95e541489006b 380 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 377 8.5E-145 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VV1_1873 02798cc8dbc833a415a95e541489006b 380 Pfam PF02684 Lipid-A-disaccharide synthetase 8 374 1.0E-129 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VV1_1873 02798cc8dbc833a415a95e541489006b 380 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 379 41.843 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VV1_1873 02798cc8dbc833a415a95e541489006b 380 SUPERFAMILY SSF53756 7 380 7.99E-29 T 14-10-2018 VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 SUPERFAMILY SSF52540 321 554 7.05E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 Pfam PF00005 ABC transporter 348 493 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 Gene3D G3DSA:3.40.50.300 323 564 9.9E-69 T 14-10-2018 VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 Gene3D G3DSA:1.20.1560.10 8 315 1.5E-27 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 SUPERFAMILY SSF90123 14 312 1.12E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 SMART SM00382 356 551 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1572 b2f341860f0a152bd7323696b79f58b2 570 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 556 2.6E-189 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VV1_0279 28ff71caa92138c7dbd70498db5a05b4 373 Pfam PF01098 Cell cycle protein 23 367 9.3E-114 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0279 28ff71caa92138c7dbd70498db5a05b4 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.264 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0279 28ff71caa92138c7dbd70498db5a05b4 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_0279 28ff71caa92138c7dbd70498db5a05b4 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.2E-135 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VV1_1422 7a593425b7f2dac281e251f9c0536c74 444 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 1.0E-55 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VV1_0039 793701459cae8b2aec150ecf954e866a 490 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 459 2.9E-154 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VV1_0039 793701459cae8b2aec150ecf954e866a 490 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 476 44.792 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 VV1_1174 d6f86cabcc0688f0bbf10b1befbbd6bd 228 Pfam PF01902 Diphthamide synthase 5 212 2.1E-21 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 VV1_1174 d6f86cabcc0688f0bbf10b1befbbd6bd 228 Gene3D G3DSA:3.40.50.620 1 144 5.3E-17 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_1174 d6f86cabcc0688f0bbf10b1befbbd6bd 228 SUPERFAMILY SSF52402 2 217 3.94E-54 T 14-10-2018 VV1_1174 d6f86cabcc0688f0bbf10b1befbbd6bd 228 Gene3D G3DSA:3.90.1490.10 145 227 3.7E-7 T 14-10-2018 VV2_0308 62248f630d7e6f46dea105f18e2d52ae 88 Gene3D G3DSA:1.10.260.40 3 60 9.6E-7 T 14-10-2018 VV2_0308 62248f630d7e6f46dea105f18e2d52ae 88 SUPERFAMILY SSF47413 20 71 3.1E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_0730 b35f37ec41d5eff5b5b5cfdb3cf80e80 150 Pfam PF13673 Acetyltransferase (GNAT) domain 50 148 2.0E-15 T 14-10-2018 IPR000182 GNAT domain VV1_0730 b35f37ec41d5eff5b5b5cfdb3cf80e80 150 SUPERFAMILY SSF55729 1 149 3.37E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_0730 b35f37ec41d5eff5b5b5cfdb3cf80e80 150 Gene3D G3DSA:3.40.630.30 1 149 1.8E-42 T 14-10-2018 VV1_2041 eb81e9fc9af00fed604321faa9082217 43 SUPERFAMILY SSF46955 2 38 2.38E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily VV1_2041 eb81e9fc9af00fed604321faa9082217 43 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 2 34 2.5E-5 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VV1_2741 1b26bfad6454587c085a5700e246de03 800 SUPERFAMILY SSF49452 710 767 1.61E-5 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VV1_2741 1b26bfad6454587c085a5700e246de03 800 Pfam PF00577 Outer membrane usher protein 256 606 1.3E-5 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 VV2_0329 70b05d5ee95745fd3eb77ec9c2294793 251 PIRSF PIRSF004846 2 249 2.3E-64 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VV2_0329 70b05d5ee95745fd3eb77ec9c2294793 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 244 2.4E-59 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VV2_0329 70b05d5ee95745fd3eb77ec9c2294793 251 Gene3D G3DSA:3.40.190.10 101 211 1.1E-70 T 14-10-2018 VV2_0329 70b05d5ee95745fd3eb77ec9c2294793 251 SUPERFAMILY SSF53850 24 246 3.21E-58 T 14-10-2018 VV2_0329 70b05d5ee95745fd3eb77ec9c2294793 251 Gene3D G3DSA:3.40.190.10 25 245 1.1E-70 T 14-10-2018 VV2_0329 70b05d5ee95745fd3eb77ec9c2294793 251 Pfam PF13531 Bacterial extracellular solute-binding protein 24 245 1.0E-44 T 14-10-2018 VV2_1271 37f6e1b3449a7a56b163f5218752adbe 161 Gene3D G3DSA:3.10.180.10 1 159 4.1E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_1271 37f6e1b3449a7a56b163f5218752adbe 161 SUPERFAMILY SSF54593 1 150 1.06E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_1271 37f6e1b3449a7a56b163f5218752adbe 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 1.1E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV2_1271 37f6e1b3449a7a56b163f5218752adbe 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VV1_1600 3d69df587d16155bcea7abff3e1861ed 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 36.033 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VV1_1600 3d69df587d16155bcea7abff3e1861ed 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 2.1E-20 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VV1_1600 3d69df587d16155bcea7abff3e1861ed 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.7E-21 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 102 131 3.9E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 192 213 3.9E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 161 179 3.9E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 14 34 3.9E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 235 249 3.9E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 PRINTS PR00075 Fatty acid desaturase family 1 signature 64 84 3.9E-31 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 PIRSF PIRSF000345 5 335 1.5E-96 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 VV2_0069 2eff4210204dea7f68af1b16d29bec00 378 Pfam PF00487 Fatty acid desaturase 47 266 3.0E-19 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 VV1_0983 7cc0a3818d91c59383a07980d27767cf 326 Gene3D G3DSA:3.90.180.10 17 325 1.5E-122 T 14-10-2018 VV1_0983 7cc0a3818d91c59383a07980d27767cf 326 Gene3D G3DSA:3.40.50.720 126 294 1.5E-122 T 14-10-2018 VV1_0983 7cc0a3818d91c59383a07980d27767cf 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 5.3E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VV1_0983 7cc0a3818d91c59383a07980d27767cf 326 SUPERFAMILY SSF50129 2 145 1.83E-44 T 14-10-2018 IPR011032 GroES-like superfamily VV1_0983 7cc0a3818d91c59383a07980d27767cf 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 326 1.8E-137 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI VV1_0983 7cc0a3818d91c59383a07980d27767cf 326 SMART SM00829 13 324 4.2E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VV1_0983 7cc0a3818d91c59383a07980d27767cf 326 SUPERFAMILY SSF51735 116 289 6.04E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV2_0235 85b204ea0c1135436342da4cdff0f3d2 157 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 4.5E-39 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 8.4E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 Gene3D G3DSA:1.10.10.10 1 98 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 SMART SM00418 15 93 3.4E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VV1_0512 6d9e403619ad65700271f2e31beabc4a 98 SUPERFAMILY SSF46785 9 96 6.02E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2237 66271d19eb322dfb8d80076fc0f019b5 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 6.0E-71 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VV1_2237 66271d19eb322dfb8d80076fc0f019b5 362 Gene3D G3DSA:3.40.190.10 156 327 3.7E-117 T 14-10-2018 VV1_2237 66271d19eb322dfb8d80076fc0f019b5 362 Gene3D G3DSA:3.40.190.170 38 348 3.7E-117 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VV1_2237 66271d19eb322dfb8d80076fc0f019b5 362 PIRSF PIRSF039026 4 362 2.4E-141 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VV1_0066 a8b5e2f19a94c43263314f14f6c3e081 206 SUPERFAMILY SSF54060 84 171 1.18E-15 T 14-10-2018 VV1_0066 a8b5e2f19a94c43263314f14f6c3e081 206 Pfam PF13392 HNH endonuclease 126 171 1.6E-17 T 14-10-2018 IPR003615 HNH nuclease VV1_0066 a8b5e2f19a94c43263314f14f6c3e081 206 Gene3D G3DSA:3.90.75.20 80 177 4.9E-6 T 14-10-2018 VV1_1059 ff80d3c307a96afc4ecb94940f0d3ad0 188 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 129 2.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1059 ff80d3c307a96afc4ecb94940f0d3ad0 188 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 40 6.8E-6 T 14-10-2018 IPR001451 Hexapeptide repeat VV1_1059 ff80d3c307a96afc4ecb94940f0d3ad0 188 Gene3D G3DSA:2.160.10.10 1 183 2.8E-55 T 14-10-2018 VV1_1059 ff80d3c307a96afc4ecb94940f0d3ad0 188 SUPERFAMILY SSF51161 4 174 6.52E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV1_0841 f9b89b6e42ed306bed0e0ceb2f825ab8 341 Gene3D G3DSA:1.10.3720.10 103 332 3.4E-18 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0841 f9b89b6e42ed306bed0e0ceb2f825ab8 341 SUPERFAMILY SSF161098 108 321 1.83E-15 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0841 f9b89b6e42ed306bed0e0ceb2f825ab8 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 8.1E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_2612 7bc3e2b2af9d50c677c25ba90a1e020b 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 3.1E-54 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VV1_1075 69ef071b228df2c887a7ea669e998f0c 108 Pfam PF13592 Winged helix-turn helix 49 106 1.1E-16 T 14-10-2018 IPR025959 Winged helix-turn helix domain VV1_1075 69ef071b228df2c887a7ea669e998f0c 108 SUPERFAMILY SSF46689 1 82 2.69E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0439 65f367daf0e0eae65260d5614fed333a 277 SUPERFAMILY SSF81606 21 250 2.75E-60 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_0439 65f367daf0e0eae65260d5614fed333a 277 SMART SM00332 10 248 1.6E-16 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_0439 65f367daf0e0eae65260d5614fed333a 277 Pfam PF13672 Protein phosphatase 2C 33 219 1.4E-16 T 14-10-2018 VV2_0439 65f367daf0e0eae65260d5614fed333a 277 Gene3D G3DSA:3.60.40.10 10 254 3.4E-59 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_0439 65f367daf0e0eae65260d5614fed333a 277 SMART SM00331 24 250 5.8E-31 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV1_2716 084ce067d33fed9695640ff153cd57b6 434 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 428 2.5E-120 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VV1_2716 084ce067d33fed9695640ff153cd57b6 434 Pfam PF02321 Outer membrane efflux protein 230 414 3.1E-30 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV1_2716 084ce067d33fed9695640ff153cd57b6 434 Pfam PF02321 Outer membrane efflux protein 24 208 1.4E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VV1_2716 084ce067d33fed9695640ff153cd57b6 434 SUPERFAMILY SSF56954 23 428 1.83E-87 T 14-10-2018 VV1_2716 084ce067d33fed9695640ff153cd57b6 434 Gene3D G3DSA:1.20.1600.10 22 425 6.3E-80 T 14-10-2018 VV2_1605 e873c4e48eb422e7a1c0faa95c0ba134 101 Pfam PF07383 Protein of unknown function (DUF1496) 42 94 8.2E-24 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 VV1_0557 987014e0b1c5a6eb083f8ac8ad5e05f7 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 4.7E-23 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VV1_0557 987014e0b1c5a6eb083f8ac8ad5e05f7 142 PIRSF PIRSF026426 1 142 3.5E-50 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 VV1_2335 6f9a89b515d5951aee3ea019822b01db 294 Pfam PF00482 Type II secretion system (T2SS), protein F 127 252 4.9E-18 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_2335 6f9a89b515d5951aee3ea019822b01db 294 Gene3D G3DSA:1.20.81.30 119 229 4.0E-7 T 14-10-2018 VV1_0205 16fe7a07e05aed7a1ec3b3ca78f58d6c 449 Gene3D G3DSA:2.40.160.10 51 448 2.1E-14 T 14-10-2018 IPR023614 Porin domain superfamily VV1_2342 040d013ad218ee1dd9c774e736a86ab6 950 Gene3D G3DSA:2.60.40.10 254 352 5.0E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2342 040d013ad218ee1dd9c774e736a86ab6 950 Gene3D G3DSA:2.60.40.10 418 514 2.6E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2342 040d013ad218ee1dd9c774e736a86ab6 950 SMART SM00636 616 929 0.0019 T 14-10-2018 IPR011583 Chitinase II GO:0008061 VV1_2342 040d013ad218ee1dd9c774e736a86ab6 950 SUPERFAMILY SSF51445 615 933 9.49E-37 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV1_2342 040d013ad218ee1dd9c774e736a86ab6 950 Pfam PF00704 Glycosyl hydrolases family 18 618 928 3.9E-20 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VV1_2342 040d013ad218ee1dd9c774e736a86ab6 950 Gene3D G3DSA:2.60.40.10 516 607 4.9E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_2342 040d013ad218ee1dd9c774e736a86ab6 950 Gene3D G3DSA:2.60.40.10 161 253 1.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PIRSF PIRSF002560 1 157 2.5E-73 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.0E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.0E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.0E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.0E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.0E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.0E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.0E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 Gene3D G3DSA:1.20.1260.10 1 158 5.5E-72 T 14-10-2018 IPR012347 Ferritin-like VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 SUPERFAMILY SSF47240 1 153 4.06E-55 T 14-10-2018 IPR009078 Ferritin-like superfamily VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.7E-82 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VV1_1341 5bdd14f36f4376b540ff541a412e493a 158 Pfam PF00210 Ferritin-like domain 8 143 1.8E-39 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VV1_2550 04256ab3487b1404b2daa9b2246a4692 56 Gene3D G3DSA:1.10.10.60 10 52 2.7E-6 T 14-10-2018 VV1_2550 04256ab3487b1404b2daa9b2246a4692 56 Pfam PF01527 Transposase 5 44 4.5E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VV1_2550 04256ab3487b1404b2daa9b2246a4692 56 SUPERFAMILY SSF46689 7 45 4.48E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0844 4a939e8cba3355ae233643d72197d754 438 Gene3D G3DSA:3.30.559.30 226 435 2.1E-19 T 14-10-2018 VV2_0844 4a939e8cba3355ae233643d72197d754 438 SUPERFAMILY SSF52777 20 194 8.89E-31 T 14-10-2018 VV2_0844 4a939e8cba3355ae233643d72197d754 438 Gene3D G3DSA:3.30.559.10 20 212 1.7E-38 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VV2_0844 4a939e8cba3355ae233643d72197d754 438 Pfam PF00668 Condensation domain 18 428 3.4E-42 T 14-10-2018 IPR001242 Condensation domain VV2_0844 4a939e8cba3355ae233643d72197d754 438 SUPERFAMILY SSF52777 200 429 2.37E-16 T 14-10-2018 VV2_0632 5c13440a9f7968f46c29f98951ee069e 100 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 8 99 6.1E-31 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 VV2_0632 5c13440a9f7968f46c29f98951ee069e 100 PIRSF PIRSF003259 1 100 2.5E-44 T 14-10-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 VV2_0632 5c13440a9f7968f46c29f98951ee069e 100 Pfam PF07178 TraL protein 9 98 4.4E-19 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 VV2_0310 d7c98527843f0dab0aee86ee1dcd27dd 51 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 9.4E-26 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VV2_0310 d7c98527843f0dab0aee86ee1dcd27dd 51 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 51 19.162 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VV2_0310 d7c98527843f0dab0aee86ee1dcd27dd 51 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 51 2.0E-12 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 VV1_3139 60d752eb09384f9aaa56c306c4abceeb 154 Pfam PF01641 SelR domain 30 148 1.6E-52 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV1_3139 60d752eb09384f9aaa56c306c4abceeb 154 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 27 150 37.051 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV1_3139 60d752eb09384f9aaa56c306c4abceeb 154 Gene3D G3DSA:2.170.150.20 16 154 1.4E-59 T 14-10-2018 VV1_3139 60d752eb09384f9aaa56c306c4abceeb 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 26 151 2.1E-54 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VV1_3139 60d752eb09384f9aaa56c306c4abceeb 154 SUPERFAMILY SSF51316 25 151 7.32E-57 T 14-10-2018 IPR011057 Mss4-like superfamily VV2_0867 ca422077d309bb8d8f612b9403f536f8 437 SUPERFAMILY SSF56176 346 434 8.18E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VV2_0867 ca422077d309bb8d8f612b9403f536f8 437 Gene3D G3DSA:3.30.465.10 349 429 1.2E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VV2_0867 ca422077d309bb8d8f612b9403f536f8 437 Gene3D G3DSA:3.10.580.10 196 348 1.9E-28 T 14-10-2018 VV2_0867 ca422077d309bb8d8f612b9403f536f8 437 SUPERFAMILY SSF54631 201 336 1.07E-17 T 14-10-2018 VV2_0867 ca422077d309bb8d8f612b9403f536f8 437 Pfam PF01595 Domain of unknown function DUF21 9 199 1.4E-40 T 14-10-2018 IPR002550 CNNM, transmembrane domain VV2_0867 ca422077d309bb8d8f612b9403f536f8 437 Pfam PF03471 Transporter associated domain 350 427 6.2E-20 T 14-10-2018 IPR005170 Transporter-associated domain VV2_0867 ca422077d309bb8d8f612b9403f536f8 437 SMART SM01091 348 428 5.6E-26 T 14-10-2018 IPR005170 Transporter-associated domain VV1_3255 6f948aa39ee0729354e7c27ebe35909e 100 Pfam PF13358 DDE superfamily endonuclease 2 68 6.9E-13 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain VV1_3255 6f948aa39ee0729354e7c27ebe35909e 100 Gene3D G3DSA:3.30.420.470 1 87 7.0E-9 T 14-10-2018 VV2_0345 442366b6ea25c50a85783999959e7b60 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 2.2E-14 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 VV1_2924 22512e40c126a1021deed6740c35753a 434 SUPERFAMILY SSF53613 31 417 1.34E-43 T 14-10-2018 IPR029056 Ribokinase-like VV1_2924 22512e40c126a1021deed6740c35753a 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 7.5E-10 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VV1_1328 d93a0a1ccce9fe7082786b2047345757 318 SUPERFAMILY SSF56235 10 314 8.38E-97 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_1328 d93a0a1ccce9fe7082786b2047345757 318 Pfam PF01112 Asparaginase 12 313 5.3E-110 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VV1_1328 d93a0a1ccce9fe7082786b2047345757 318 Gene3D G3DSA:3.60.20.30 183 318 1.2E-46 T 14-10-2018 VV1_1766 815b24805860c702ae26d1b85d948fbb 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 3.7E-25 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family VV1_1766 815b24805860c702ae26d1b85d948fbb 150 Gene3D G3DSA:2.60.120.370 1 143 2.1E-14 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily VV1_1766 815b24805860c702ae26d1b85d948fbb 150 SUPERFAMILY SSF51197 1 143 1.32E-24 T 14-10-2018 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 Gene3D G3DSA:1.10.10.60 227 279 1.3E-17 T 14-10-2018 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 SUPERFAMILY SSF46689 179 226 2.69E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 SMART SM00342 193 276 7.3E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 SUPERFAMILY SSF46689 229 278 1.03E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 Pfam PF12833 Helix-turn-helix domain 199 277 1.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 1.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 1.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_1350 946951e0100ea828504f0738bad0e0fa 279 Gene3D G3DSA:1.10.10.60 176 226 5.0E-13 T 14-10-2018 VV1_1444 19b8b05c58f533210389c6e38f0857d8 161 SUPERFAMILY SSF54523 9 128 5.49E-10 T 14-10-2018 VV1_1444 19b8b05c58f533210389c6e38f0857d8 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.5E-6 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV1_1444 19b8b05c58f533210389c6e38f0857d8 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.5E-6 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV1_1444 19b8b05c58f533210389c6e38f0857d8 161 Gene3D G3DSA:3.30.700.10 9 157 2.7E-7 T 14-10-2018 VV1_1444 19b8b05c58f533210389c6e38f0857d8 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 2.1E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1444 19b8b05c58f533210389c6e38f0857d8 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.4E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV2_0248 1ec18e33a9816eb74f830d189bbb3760 825 SUPERFAMILY SSF53474 462 737 8.02E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0248 1ec18e33a9816eb74f830d189bbb3760 825 Gene3D G3DSA:3.40.50.1820 455 757 8.4E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0248 1ec18e33a9816eb74f830d189bbb3760 825 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 804 2.3E-161 T 14-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family VV2_0248 1ec18e33a9816eb74f830d189bbb3760 825 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 279 3.1E-75 T 14-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 Gene3D G3DSA:3.10.290.10 2 76 6.1E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.2E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 Gene3D G3DSA:3.30.2350.10 85 316 7.5E-72 T 14-10-2018 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 SUPERFAMILY SSF55174 17 67 1.06E-10 T 14-10-2018 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 4.9E-106 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 Pfam PF01479 S4 domain 18 65 1.1E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 SUPERFAMILY SSF55120 78 315 5.76E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VV1_0484 d2a53bb4c9e81b29b3950773271319ce 325 SMART SM00363 18 83 1.3E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV2_0610 7ad721ed14cf3a8c025b4338ec301562 207 Gene3D G3DSA:2.160.10.10 1 207 7.8E-76 T 14-10-2018 VV2_0610 7ad721ed14cf3a8c025b4338ec301562 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 1.7E-10 T 14-10-2018 IPR001451 Hexapeptide repeat VV2_0610 7ad721ed14cf3a8c025b4338ec301562 207 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VV2_0610 7ad721ed14cf3a8c025b4338ec301562 207 SUPERFAMILY SSF51161 18 204 3.05E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily VV2_0753 6aa0a0f905a7602d0b52469a686c32fa 366 Pfam PF13407 Periplasmic binding protein domain 69 322 5.7E-14 T 14-10-2018 IPR025997 Periplasmic binding protein VV2_0753 6aa0a0f905a7602d0b52469a686c32fa 366 Gene3D G3DSA:3.40.50.2300 33 363 7.8E-145 T 14-10-2018 VV2_0753 6aa0a0f905a7602d0b52469a686c32fa 366 Gene3D G3DSA:3.40.50.2300 180 359 7.8E-145 T 14-10-2018 VV2_0753 6aa0a0f905a7602d0b52469a686c32fa 366 SUPERFAMILY SSF53822 27 364 2.16E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_0809 94756e3f6f56520193b07b807191f117 330 Gene3D G3DSA:3.40.630.30 130 288 1.4E-16 T 14-10-2018 VV1_0809 94756e3f6f56520193b07b807191f117 330 SUPERFAMILY SSF55729 146 303 5.03E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_0809 94756e3f6f56520193b07b807191f117 330 Pfam PF13480 Acetyltransferase (GNAT) domain 146 271 2.7E-6 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VV2_1658 4db3bcd6d5130aa448e05f7df59da8b9 300 SUPERFAMILY SSF58104 42 296 7.19E-46 T 14-10-2018 VV2_1658 4db3bcd6d5130aa448e05f7df59da8b9 300 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 88 271 7.8E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV2_1658 4db3bcd6d5130aa448e05f7df59da8b9 300 Gene3D G3DSA:1.10.287.950 19 300 3.4E-45 T 14-10-2018 VV2_1658 4db3bcd6d5130aa448e05f7df59da8b9 300 SMART SM00283 53 300 7.8E-21 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_1283 e2b3f25c8318388c602546599d0109e8 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 8 465 7.0E-48 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV1_1283 e2b3f25c8318388c602546599d0109e8 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 466 7.0E-81 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV2_0270 2a9fa8f74b37aaa415196406efbe3388 481 Pfam PF01266 FAD dependent oxidoreductase 12 344 1.4E-10 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV2_0270 2a9fa8f74b37aaa415196406efbe3388 481 Gene3D G3DSA:3.50.50.60 8 134 3.3E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0270 2a9fa8f74b37aaa415196406efbe3388 481 SUPERFAMILY SSF51905 11 273 8.42E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0693 7b0e637590257e95dc27d7dd4af9bb5b 50 SUPERFAMILY SSF48295 3 47 3.03E-8 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VV2_0693 7b0e637590257e95dc27d7dd4af9bb5b 50 Pfam PF01527 Transposase 11 46 7.1E-7 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VV1_1513 f5317b61410b1835a102b88570c43fce 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VV1_1513 f5317b61410b1835a102b88570c43fce 379 Pfam PF01464 Transglycosylase SLT domain 211 332 1.3E-27 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 VV1_1513 f5317b61410b1835a102b88570c43fce 379 Gene3D G3DSA:1.10.530.10 190 371 4.4E-49 T 14-10-2018 VV1_1513 f5317b61410b1835a102b88570c43fce 379 SUPERFAMILY SSF53955 182 371 2.79E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily VV1_1513 f5317b61410b1835a102b88570c43fce 379 Pfam PF11873 Domain of unknown function (DUF3393) 6 206 4.6E-79 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VV2_0041 16070c78b146e26c42f5cddda824a4b8 138 Pfam PF01925 Sulfite exporter TauE/SafE 26 131 1.4E-12 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VV1_2480 f13a99f5c607ca9c80cfdbc2e29e71f0 149 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 3.0E-25 T 14-10-2018 IPR000182 GNAT domain VV1_2480 f13a99f5c607ca9c80cfdbc2e29e71f0 149 Gene3D G3DSA:3.40.630.30 2 149 5.7E-19 T 14-10-2018 VV1_2480 f13a99f5c607ca9c80cfdbc2e29e71f0 149 SUPERFAMILY SSF55729 1 147 6.03E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1025 d70d92bbe4e9ddde7d1b659ad2fb0454 258 Gene3D G3DSA:3.40.190.10 25 244 5.6E-63 T 14-10-2018 VV1_1025 d70d92bbe4e9ddde7d1b659ad2fb0454 258 SMART SM00062 33 257 7.5E-37 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_1025 d70d92bbe4e9ddde7d1b659ad2fb0454 258 SUPERFAMILY SSF53850 1 255 1.93E-50 T 14-10-2018 VV1_1025 d70d92bbe4e9ddde7d1b659ad2fb0454 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VV1_1025 d70d92bbe4e9ddde7d1b659ad2fb0454 258 Gene3D G3DSA:3.40.190.10 120 211 5.6E-63 T 14-10-2018 VV1_1025 d70d92bbe4e9ddde7d1b659ad2fb0454 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 1.0E-37 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_3253 891a52aab3565c9f83f30004e71c3f5a 647 Gene3D G3DSA:1.10.443.10 291 468 4.6E-16 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_3253 891a52aab3565c9f83f30004e71c3f5a 647 SUPERFAMILY SSF56349 303 478 1.06E-18 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_3253 891a52aab3565c9f83f30004e71c3f5a 647 Pfam PF00589 Phage integrase family 302 465 2.8E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV1_1803 8b6943ddbb9c77cd13079f1ae0bb3f1b 142 SUPERFAMILY SSF82649 4 141 1.2E-50 T 14-10-2018 VV1_1803 8b6943ddbb9c77cd13079f1ae0bb3f1b 142 Gene3D G3DSA:3.90.1010.10 1 142 3.5E-52 T 14-10-2018 VV1_1803 8b6943ddbb9c77cd13079f1ae0bb3f1b 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 1.7E-48 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VV1_1803 8b6943ddbb9c77cd13079f1ae0bb3f1b 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 8.6E-48 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 SMART SM00450 5 128 6.9E-15 T 14-10-2018 IPR001763 Rhodanese-like domain VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 SMART SM00450 152 272 6.2E-19 T 14-10-2018 IPR001763 Rhodanese-like domain VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 SUPERFAMILY SSF52821 156 275 1.01E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 Pfam PF00581 Rhodanese-like domain 160 268 3.3E-11 T 14-10-2018 IPR001763 Rhodanese-like domain VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 Pfam PF00581 Rhodanese-like domain 6 123 6.4E-15 T 14-10-2018 IPR001763 Rhodanese-like domain VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 Gene3D G3DSA:3.40.250.10 157 276 2.4E-39 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 Gene3D G3DSA:3.40.250.10 1 140 6.7E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV2_0547 71e78bafc59f698e5aa9b84ead672b88 276 SUPERFAMILY SSF52821 2 135 2.75E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily VV1_1012 a763e3cab7f55bf90a4c7c408c714df7 257 Gene3D G3DSA:3.40.50.300 1 255 7.2E-77 T 14-10-2018 VV1_1012 a763e3cab7f55bf90a4c7c408c714df7 257 Pfam PF13614 AAA domain 2 178 2.1E-62 T 14-10-2018 IPR025669 AAA domain VV1_1012 a763e3cab7f55bf90a4c7c408c714df7 257 SUPERFAMILY SSF52540 2 254 5.57E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1012 a763e3cab7f55bf90a4c7c408c714df7 257 PIRSF PIRSF009320 2 56 2.0E-13 T 14-10-2018 VV1_1012 a763e3cab7f55bf90a4c7c408c714df7 257 PIRSF PIRSF009320 88 253 6.8E-9 T 14-10-2018 VV2_1670 b972c7847e88ec79012650b1ed268c5e 574 SUPERFAMILY SSF161098 312 558 8.5E-31 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1670 b972c7847e88ec79012650b1ed268c5e 574 Gene3D G3DSA:1.10.3720.10 310 564 6.0E-28 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1670 b972c7847e88ec79012650b1ed268c5e 574 Gene3D G3DSA:1.10.3720.10 28 291 9.5E-49 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1670 b972c7847e88ec79012650b1ed268c5e 574 SUPERFAMILY SSF161098 30 284 5.78E-43 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1670 b972c7847e88ec79012650b1ed268c5e 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 286 5.3E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1670 b972c7847e88ec79012650b1ed268c5e 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 392 563 1.2E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1670 b972c7847e88ec79012650b1ed268c5e 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 1.4E-258 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative VV1_2252 67d6d959f92b15b490375b756b57206e 468 Pfam PF00155 Aminotransferase class I and II 133 447 6.8E-32 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV1_2252 67d6d959f92b15b490375b756b57206e 468 SUPERFAMILY SSF46785 1 68 8.71E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_2252 67d6d959f92b15b490375b756b57206e 468 Gene3D G3DSA:3.40.640.10 138 357 3.4E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_2252 67d6d959f92b15b490375b756b57206e 468 SMART SM00345 7 66 5.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2252 67d6d959f92b15b490375b756b57206e 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 9.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VV1_2252 67d6d959f92b15b490375b756b57206e 468 Gene3D G3DSA:1.10.10.10 1 68 3.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2252 67d6d959f92b15b490375b756b57206e 468 SUPERFAMILY SSF53383 84 463 1.29E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV1_2252 67d6d959f92b15b490375b756b57206e 468 Gene3D G3DSA:3.90.1150.10 101 459 3.4E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV1_2366 4b591c81aac0faca66488230c9799091 793 SUPERFAMILY SSF82866 579 770 2.09E-32 T 14-10-2018 VV1_2366 4b591c81aac0faca66488230c9799091 793 Pfam PF03176 MMPL family 64 389 4.1E-20 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VV1_2366 4b591c81aac0faca66488230c9799091 793 Pfam PF03176 MMPL family 593 769 1.7E-14 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VV1_2366 4b591c81aac0faca66488230c9799091 793 SUPERFAMILY SSF82866 170 386 5.89E-32 T 14-10-2018 VV1_2366 4b591c81aac0faca66488230c9799091 793 Gene3D G3DSA:1.20.1640.10 188 404 1.0E-13 T 14-10-2018 VV1_2366 4b591c81aac0faca66488230c9799091 793 Gene3D G3DSA:1.20.1640.10 589 781 8.0E-16 T 14-10-2018 VV1_0662 60da652d679f2dfd9a9e0b13c94171e4 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 320 1.2E-106 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VV1_0662 60da652d679f2dfd9a9e0b13c94171e4 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 327 36.282 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VV1_0662 60da652d679f2dfd9a9e0b13c94171e4 328 Gene3D G3DSA:3.40.718.10 1 328 5.4E-122 T 14-10-2018 VV1_0662 60da652d679f2dfd9a9e0b13c94171e4 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 323 1.6E-126 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VV1_0662 60da652d679f2dfd9a9e0b13c94171e4 328 SUPERFAMILY SSF53659 3 326 2.08E-112 T 14-10-2018 VV1_1145 6fa039a918242f422fef8872cf4064a8 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 3.1E-27 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 VV1_1145 6fa039a918242f422fef8872cf4064a8 109 Gene3D G3DSA:2.40.50.660 32 108 1.6E-7 T 14-10-2018 VV2_0941 c922364ea951a63b1182fa512a580315 151 SUPERFAMILY SSF55729 11 146 1.51E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_0941 c922364ea951a63b1182fa512a580315 151 Pfam PF00583 Acetyltransferase (GNAT) family 25 129 9.1E-15 T 14-10-2018 IPR000182 GNAT domain VV2_0941 c922364ea951a63b1182fa512a580315 151 Gene3D G3DSA:3.40.630.30 2 151 5.3E-43 T 14-10-2018 VV1_2690 012e9574b1962d4fbd3f7eeca4abd8e0 388 Pfam PF12698 ABC-2 family transporter protein 15 370 3.5E-41 T 14-10-2018 VV1_1729 55e964d1904c8098b3cea99934085a86 203 Pfam PF10144 Bacterial virulence factor haemolysin 7 151 2.2E-38 T 14-10-2018 IPR019305 Uncharacterised protein family Smp VV1_3108 2ae6a5a4cd929255db44afaf6f42b0fc 178 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 12 171 3.3E-62 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VV2_0281 a459d705acca24a42e265175cb3c7f03 124 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 6.8E-47 T 14-10-2018 IPR021753 Protein of unknown function DUF3319 VV1_3242 1b08c5f9e8583d47d4f8ac21b0ef534e 261 SUPERFAMILY SSF55486 53 221 1.77E-10 T 14-10-2018 VV1_1482 17b9498a2b74bd0edfcf382924050099 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 6.0E-24 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VV1_1482 17b9498a2b74bd0edfcf382924050099 101 Gene3D G3DSA:3.40.50.2300 2 101 3.1E-38 T 14-10-2018 VV1_1482 17b9498a2b74bd0edfcf382924050099 101 SUPERFAMILY SSF52794 1 101 9.42E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VV2_0797 fa394cc6d411618225923e8c56ad9d73 564 Pfam PF02652 L-lactate permease 7 547 1.3E-108 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VV2_0797 fa394cc6d411618225923e8c56ad9d73 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 552 1.3E-106 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VV2_0388 b6ed2e8a2e74d23713f08f271ca9fb71 1040 SUPERFAMILY SSF103647 247 346 1.83E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VV2_0388 b6ed2e8a2e74d23713f08f271ca9fb71 1040 Gene3D G3DSA:4.10.1080.10 233 344 4.5E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VV2_0388 b6ed2e8a2e74d23713f08f271ca9fb71 1040 Gene3D G3DSA:4.10.1080.10 345 420 2.7E-8 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VV2_0388 b6ed2e8a2e74d23713f08f271ca9fb71 1040 SUPERFAMILY SSF103647 346 414 1.15E-9 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VV2_1590 a3e5ce9a88423263fa5bd75510fe1328 302 SUPERFAMILY SSF103481 41 137 3.4E-12 T 14-10-2018 VV2_1590 a3e5ce9a88423263fa5bd75510fe1328 302 SUPERFAMILY SSF103481 197 287 2.62E-12 T 14-10-2018 VV2_1590 a3e5ce9a88423263fa5bd75510fe1328 302 Pfam PF00892 EamA-like transporter family 3 135 2.4E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1590 a3e5ce9a88423263fa5bd75510fe1328 302 Pfam PF00892 EamA-like transporter family 151 280 2.7E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_3213 92fa74476367c640c616ab887d6b8f03 373 Gene3D G3DSA:3.40.50.2000 197 353 1.0E-9 T 14-10-2018 VV1_3213 92fa74476367c640c616ab887d6b8f03 373 SUPERFAMILY SSF53756 17 307 2.26E-17 T 14-10-2018 VV1_3213 92fa74476367c640c616ab887d6b8f03 373 Gene3D G3DSA:3.40.50.2000 11 194 1.6E-7 T 14-10-2018 VV1_3213 92fa74476367c640c616ab887d6b8f03 373 Pfam PF13692 Glycosyl transferases group 1 193 306 2.0E-7 T 14-10-2018 VV1_0055 aa384b341c25163496ff49396edb7fb5 208 SUPERFAMILY SSF89392 29 195 1.22E-23 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VV1_0055 aa384b341c25163496ff49396edb7fb5 208 Gene3D G3DSA:2.50.20.10 27 208 1.1E-24 T 14-10-2018 VV1_0055 aa384b341c25163496ff49396edb7fb5 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 42 195 4.7E-12 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VV2_1528 1342b2f89755835c07c28ad3a8db5f24 166 SUPERFAMILY SSF55729 3 161 3.09E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_1528 1342b2f89755835c07c28ad3a8db5f24 166 Gene3D G3DSA:3.40.630.30 1 163 1.2E-41 T 14-10-2018 VV2_1528 1342b2f89755835c07c28ad3a8db5f24 166 Pfam PF00583 Acetyltransferase (GNAT) family 34 136 8.6E-16 T 14-10-2018 IPR000182 GNAT domain VV2_0142 da47f01dd4ab311fb9df9610130116cf 1162 Gene3D G3DSA:2.60.40.1080 338 420 5.2E-6 T 14-10-2018 VV2_0142 da47f01dd4ab311fb9df9610130116cf 1162 SMART SM00635 508 589 1.2E-8 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 VV2_0142 da47f01dd4ab311fb9df9610130116cf 1162 SUPERFAMILY SSF49373 457 505 1.41E-5 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VV2_0142 da47f01dd4ab311fb9df9610130116cf 1162 Gene3D G3DSA:2.60.40.1080 421 507 2.5E-10 T 14-10-2018 VV2_0142 da47f01dd4ab311fb9df9610130116cf 1162 Gene3D G3DSA:2.60.40.1080 508 596 3.4E-18 T 14-10-2018 VV2_0142 da47f01dd4ab311fb9df9610130116cf 1162 SUPERFAMILY SSF49373 509 591 1.57E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments VV2_1357 c4626b627c7316cdf3c389907f210204 146 SUPERFAMILY SSF55804 1 144 4.84E-29 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1357 c4626b627c7316cdf3c389907f210204 146 Gene3D G3DSA:3.40.930.10 1 146 1.2E-31 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VV2_1357 c4626b627c7316cdf3c389907f210204 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 125 8.9E-31 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VV2_1357 c4626b627c7316cdf3c389907f210204 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 6.5E-31 T 14-10-2018 IPR002178 PTS EIIA type-2 domain VV1_0087 df3582601e83ef3ffd5cefe579acca39 131 Pfam PF06995 Phage P2 GpU 9 126 3.0E-35 T 14-10-2018 IPR009734 Myoviridae, GpU VV1_0087 df3582601e83ef3ffd5cefe579acca39 131 PIRSF PIRSF029208 1 131 1.5E-51 T 14-10-2018 IPR016912 Bacteriophage P2, GpU VV1_1784 63363975708ab4be0f73722387e90760 309 Gene3D G3DSA:1.20.58.340 252 309 4.5E-9 T 14-10-2018 VV1_1784 63363975708ab4be0f73722387e90760 309 Gene3D G3DSA:3.30.460.20 1 124 6.3E-43 T 14-10-2018 VV1_1784 63363975708ab4be0f73722387e90760 309 Gene3D G3DSA:1.20.58.340 125 249 6.3E-24 T 14-10-2018 VV1_1784 63363975708ab4be0f73722387e90760 309 Pfam PF01544 CorA-like Mg2+ transporter protein 28 304 5.2E-42 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VV1_1784 63363975708ab4be0f73722387e90760 309 SUPERFAMILY SSF144083 246 306 2.75E-12 T 14-10-2018 VV1_1784 63363975708ab4be0f73722387e90760 309 SUPERFAMILY SSF143865 26 235 8.37E-30 T 14-10-2018 VV1_1457 16622ad2b90da4da900844f39f25e14a 459 Gene3D G3DSA:3.40.50.300 246 457 1.0E-65 T 14-10-2018 VV1_1457 16622ad2b90da4da900844f39f25e14a 459 Pfam PF13638 PIN domain 9 150 3.0E-35 T 14-10-2018 IPR002716 PIN domain VV1_1457 16622ad2b90da4da900844f39f25e14a 459 Pfam PF02562 PhoH-like protein 249 453 3.9E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 VV1_1457 16622ad2b90da4da900844f39f25e14a 459 Gene3D G3DSA:3.40.50.1010 3 155 4.7E-28 T 14-10-2018 VV1_1457 16622ad2b90da4da900844f39f25e14a 459 SUPERFAMILY SSF52540 159 438 9.81E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1457 16622ad2b90da4da900844f39f25e14a 459 SUPERFAMILY SSF88723 7 161 2.75E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily VV1_1457 16622ad2b90da4da900844f39f25e14a 459 SMART SM00670 7 141 1.2E-10 T 14-10-2018 IPR002716 PIN domain VV1_2224 b31355c6ebd17ec8508007e6097fcd88 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 9.8E-115 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein VV1_2224 b31355c6ebd17ec8508007e6097fcd88 321 SUPERFAMILY SSF53822 42 252 1.43E-19 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV1_2224 b31355c6ebd17ec8508007e6097fcd88 321 Gene3D G3DSA:3.40.50.2300 143 314 7.0E-104 T 14-10-2018 VV1_2224 b31355c6ebd17ec8508007e6097fcd88 321 Gene3D G3DSA:3.40.50.2300 46 292 7.0E-104 T 14-10-2018 VV1_2323 a06d2cdd1a6621450df21a17a8441084 148 Pfam PF05099 Tellurite resistance protein TerB 9 143 6.6E-40 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VV1_2323 a06d2cdd1a6621450df21a17a8441084 148 SUPERFAMILY SSF158682 2 147 2.35E-30 T 14-10-2018 IPR029024 TerB-like VV1_2323 a06d2cdd1a6621450df21a17a8441084 148 Gene3D G3DSA:1.10.3680.10 1 139 2.0E-19 T 14-10-2018 IPR029024 TerB-like VV1_2169 cc1624df6a854e4d78b57c4632397526 355 SUPERFAMILY SSF74653 265 355 2.16E-15 T 14-10-2018 VV1_2169 cc1624df6a854e4d78b57c4632397526 355 Pfam PF06519 TolA C-terminal 254 352 7.7E-29 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VV1_2169 cc1624df6a854e4d78b57c4632397526 355 Gene3D G3DSA:3.30.1150.10 254 353 1.6E-23 T 14-10-2018 VV1_2169 cc1624df6a854e4d78b57c4632397526 355 TIGRFAM TIGR02794 tolA_full: protein TolA 14 354 4.7E-92 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 Gene3D G3DSA:1.10.150.240 22 92 2.1E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 Gene3D G3DSA:3.40.50.1000 12 192 2.1E-43 T 14-10-2018 IPR023214 HAD superfamily VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 102 189 3.8E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 3.4E-26 T 14-10-2018 VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 3.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 3.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 3.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 SUPERFAMILY SSF56784 10 195 1.43E-42 T 14-10-2018 IPR036412 HAD-like superfamily VV2_0527 d47a75bbc665c718206e32ffc78928f7 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 1.2E-63 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VV1_3214 074f6491bfc333a7ad78fce4c790425a 573 Pfam PF07940 Heparinase II/III-like protein 437 497 4.1E-5 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 VV1_3214 074f6491bfc333a7ad78fce4c790425a 573 Pfam PF16889 Heparinase II/III N-terminus 65 300 2.4E-10 T 14-10-2018 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 VV1_3214 074f6491bfc333a7ad78fce4c790425a 573 SUPERFAMILY SSF48230 108 370 5.68E-19 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV1_3214 074f6491bfc333a7ad78fce4c790425a 573 Gene3D G3DSA:1.50.10.100 43 386 2.4E-49 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VV1_3214 074f6491bfc333a7ad78fce4c790425a 573 Gene3D G3DSA:2.70.98.70 447 565 9.2E-7 T 14-10-2018 VV1_0651 899d0f33c19afb0da3e5c20d3ce10361 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 310 1.2E-98 T 14-10-2018 IPR005262 Conserved hypothetical protein CHP00661 VV1_0651 899d0f33c19afb0da3e5c20d3ce10361 348 SUPERFAMILY SSF53756 1 306 9.03E-13 T 14-10-2018 VV1_0651 899d0f33c19afb0da3e5c20d3ce10361 348 Gene3D G3DSA:3.40.50.2000 174 317 1.3E-6 T 14-10-2018 VV1_0651 899d0f33c19afb0da3e5c20d3ce10361 348 Pfam PF13528 Glycosyl transferase family 1 1 300 9.7E-44 T 14-10-2018 VV2_0918 994d017883ad93e83025f91edbde8528 484 Pfam PF11840 Protein of unknown function (DUF3360) 3 484 7.4E-253 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 VV1_0559 f36022a472497361521f0bc04c309af5 317 Pfam PF03186 CobD/Cbib protein 18 291 5.6E-36 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VV1_2898 2f21758c32d129bb02c8b93a454790dc 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 12 251 4.6E-72 T 14-10-2018 IPR005226 UPF0014 family VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 Gene3D G3DSA:3.40.50.300 4 454 1.2E-187 T 14-10-2018 VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 Gene3D G3DSA:3.10.410.10 469 558 5.1E-32 T 14-10-2018 VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 3.9E-240 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.69 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 SUPERFAMILY SSF52540 4 580 2.37E-218 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 Gene3D G3DSA:3.30.1510.10 129 264 1.2E-187 T 14-10-2018 VV2_0216 3f270e058a94b833b33fb3aef67cf92b 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VV2_1619 bc76da75efb030760eba6f7c07672174 307 SMART SM00260 11 147 4.1E-18 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_1619 bc76da75efb030760eba6f7c07672174 307 Gene3D G3DSA:2.30.30.40 17 141 3.2E-24 T 14-10-2018 VV2_1619 bc76da75efb030760eba6f7c07672174 307 PIRSF PIRSF002867 1 298 3.2E-87 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV VV2_1619 bc76da75efb030760eba6f7c07672174 307 Gene3D G3DSA:2.40.50.180 31 146 3.2E-24 T 14-10-2018 VV2_1619 bc76da75efb030760eba6f7c07672174 307 SUPERFAMILY SSF52172 171 293 4.98E-21 T 14-10-2018 IPR011006 CheY-like superfamily VV2_1619 bc76da75efb030760eba6f7c07672174 307 SMART SM00448 173 290 1.4E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1619 bc76da75efb030760eba6f7c07672174 307 Gene3D G3DSA:3.40.50.2300 163 302 1.5E-21 T 14-10-2018 VV2_1619 bc76da75efb030760eba6f7c07672174 307 Pfam PF01584 CheW-like domain 14 149 3.2E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VV2_1619 bc76da75efb030760eba6f7c07672174 307 Pfam PF00072 Response regulator receiver domain 175 289 7.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_1619 bc76da75efb030760eba6f7c07672174 307 SUPERFAMILY SSF50341 11 152 1.57E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 Gene3D G3DSA:3.30.700.10 14 146 1.8E-29 T 14-10-2018 VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 Pfam PF00114 Pilin (bacterial filament) 43 145 9.5E-11 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 5.1E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 SUPERFAMILY SSF54523 14 145 6.8E-26 T 14-10-2018 VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 7.1E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 5.9E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 5.9E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV1_1626 eeafa47e2a8468dc5b01cb87c5cf15ff 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0413 db89cc98c262243610eb0279384c23ce 300 Gene3D G3DSA:3.40.190.10 163 271 6.5E-46 T 14-10-2018 VV1_0413 db89cc98c262243610eb0279384c23ce 300 Gene3D G3DSA:3.40.190.10 103 294 6.5E-46 T 14-10-2018 VV1_0413 db89cc98c262243610eb0279384c23ce 300 Pfam PF03466 LysR substrate binding domain 94 294 1.5E-24 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0413 db89cc98c262243610eb0279384c23ce 300 SUPERFAMILY SSF53850 95 299 9.41E-26 T 14-10-2018 VV1_0413 db89cc98c262243610eb0279384c23ce 300 Gene3D G3DSA:1.10.10.10 6 99 1.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0413 db89cc98c262243610eb0279384c23ce 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0413 db89cc98c262243610eb0279384c23ce 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0413 db89cc98c262243610eb0279384c23ce 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0413 db89cc98c262243610eb0279384c23ce 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0413 db89cc98c262243610eb0279384c23ce 300 SUPERFAMILY SSF46785 9 113 1.06E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 SUPERFAMILY SSF46689 243 292 1.25E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 2.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 2.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 Gene3D G3DSA:2.60.120.280 41 149 2.5E-9 T 14-10-2018 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 Gene3D G3DSA:1.10.10.60 188 294 4.4E-26 T 14-10-2018 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 SMART SM00342 207 290 4.4E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 Pfam PF12833 Helix-turn-helix domain 214 291 1.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VV2_0352 cae85b07c50df3804f324dfb7b0595b7 294 SUPERFAMILY SSF51215 35 174 1.12E-10 T 14-10-2018 IPR037923 Transcription regulator HTH-like VV1_0660 868b5a6ef3862f4a9ecb97cda7b8970c 776 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 748 19.769 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VV1_0660 868b5a6ef3862f4a9ecb97cda7b8970c 776 Pfam PF04453 Organic solvent tolerance protein 295 677 3.5E-111 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VV1_0660 868b5a6ef3862f4a9ecb97cda7b8970c 776 Pfam PF03968 OstA-like protein 56 187 6.3E-21 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VV1_0660 868b5a6ef3862f4a9ecb97cda7b8970c 776 Gene3D G3DSA:2.60.450.10 45 96 7.4E-7 T 14-10-2018 VV1_2030 5f812e541d79b24a1f16b1ec95e536f2 560 SUPERFAMILY SSF116734 349 543 3.27E-29 T 14-10-2018 VV1_2030 5f812e541d79b24a1f16b1ec95e536f2 560 Pfam PF01420 Type I restriction modification DNA specificity domain 365 534 2.9E-5 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VV1_2030 5f812e541d79b24a1f16b1ec95e536f2 560 Pfam PF01420 Type I restriction modification DNA specificity domain 102 257 1.1E-7 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VV1_2030 5f812e541d79b24a1f16b1ec95e536f2 560 Gene3D G3DSA:3.90.220.20 74 252 5.2E-17 T 14-10-2018 VV1_2030 5f812e541d79b24a1f16b1ec95e536f2 560 Gene3D G3DSA:3.90.220.20 343 560 3.1E-32 T 14-10-2018 VV1_2030 5f812e541d79b24a1f16b1ec95e536f2 560 SUPERFAMILY SSF116734 86 325 1.52E-30 T 14-10-2018 VV2_1220 4841afb5ffd0c9e2097d809f78a3b83f 281 Gene3D G3DSA:2.60.120.10 143 249 1.3E-80 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_1220 4841afb5ffd0c9e2097d809f78a3b83f 281 SUPERFAMILY SSF51182 8 279 2.97E-72 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_1220 4841afb5ffd0c9e2097d809f78a3b83f 281 Pfam PF05726 Pirin C-terminal cupin domain 181 279 6.2E-26 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 VV2_1220 4841afb5ffd0c9e2097d809f78a3b83f 281 Pfam PF02678 Pirin 31 121 7.0E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VV2_1220 4841afb5ffd0c9e2097d809f78a3b83f 281 PIRSF PIRSF006232 3 281 9.9E-82 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VV2_1220 4841afb5ffd0c9e2097d809f78a3b83f 281 Gene3D G3DSA:2.60.120.10 18 275 1.3E-80 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV2_0566 593b2f4f1b3658e35d13d6d33c55348e 203 Gene3D G3DSA:2.60.370.10 57 188 9.3E-42 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0566 593b2f4f1b3658e35d13d6d33c55348e 203 SUPERFAMILY SSF110111 57 174 6.28E-45 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0566 593b2f4f1b3658e35d13d6d33c55348e 203 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 173 8.5E-48 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0566 593b2f4f1b3658e35d13d6d33c55348e 203 PIRSF PIRSF005413 2 193 3.6E-68 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_2668 8db9defd5b3ca39bc52de1fa4a72219a 486 Pfam PF01943 Polysaccharide biosynthesis protein 12 273 7.8E-12 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VV1_1353 73a7ad11873721809ff42f068a678bba 305 PIRSF PIRSF005355 1 303 1.2E-82 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VV1_1353 73a7ad11873721809ff42f068a678bba 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.7E-97 T 14-10-2018 VV1_1353 73a7ad11873721809ff42f068a678bba 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.585 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VV1_1353 73a7ad11873721809ff42f068a678bba 305 Pfam PF01040 UbiA prenyltransferase family 21 275 4.8E-38 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VV1_0513 671319ff820140eec2995efba79e937f 296 SUPERFAMILY SSF46785 2 85 1.27E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_0513 671319ff820140eec2995efba79e937f 296 SUPERFAMILY SSF53850 91 288 6.15E-24 T 14-10-2018 VV1_0513 671319ff820140eec2995efba79e937f 296 Pfam PF03466 LysR substrate binding domain 96 288 6.5E-12 T 14-10-2018 IPR005119 LysR, substrate-binding VV1_0513 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:1.10.10.10 4 92 8.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0513 671319ff820140eec2995efba79e937f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV1_0513 671319ff820140eec2995efba79e937f 296 Gene3D G3DSA:3.40.190.290 95 292 2.2E-8 T 14-10-2018 VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.0E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.0E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.0E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.0E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.0E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.0E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 3.2E-57 T 14-10-2018 VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 Gene3D G3DSA:3.40.50.720 1 253 4.8E-80 T 14-10-2018 VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 1.7E-128 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 VV2_1093 61c862ab657d07f7c23c7452a10ab3d5 253 SUPERFAMILY SSF51735 6 252 2.96E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0845 847f6b251406de115ed46e28bb3d3c58 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 51 168 2.5E-20 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 SUPERFAMILY SSF46785 6 135 9.69E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 SMART SM00347 23 124 3.5E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 Gene3D G3DSA:1.10.10.10 1 136 2.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 Pfam PF01047 MarR family 33 88 1.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV1_1710 28008c5ee5c1791c0531820b2a56ee03 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VV2_0809 dc209e7541af6d9a903a70d472b52a2a 236 Pfam PF00753 Metallo-beta-lactamase superfamily 15 163 2.1E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0809 dc209e7541af6d9a903a70d472b52a2a 236 SMART SM00849 15 197 4.8E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase VV2_0809 dc209e7541af6d9a903a70d472b52a2a 236 Gene3D G3DSA:3.60.15.10 2 232 1.4E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV2_0809 dc209e7541af6d9a903a70d472b52a2a 236 SUPERFAMILY SSF56281 10 202 1.68E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VV1_0601 72a7c33597efe7f1a598b7a4d87576b3 149 PIRSF PIRSF006318 1 137 4.3E-51 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VV1_0601 72a7c33597efe7f1a598b7a4d87576b3 149 Pfam PF06295 Protein of unknown function (DUF1043) 6 131 1.2E-45 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 VV1_1213 e8a853986f05d084f76ffab258bec287 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 2.4E-54 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VV1_1213 e8a853986f05d084f76ffab258bec287 164 Gene3D G3DSA:1.20.120.1370 1 157 3.0E-51 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily VV1_1213 e8a853986f05d084f76ffab258bec287 164 PIRSF PIRSF016548 3 164 6.4E-72 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VV1_2383 6f882aa8860e41d121e2ec065ac13513 229 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 VV1_2383 6f882aa8860e41d121e2ec065ac13513 229 PIRSF PIRSF028111 1 229 2.4E-86 T 14-10-2018 IPR016868 Bacteriophage B3, Orf5 VV1_2021 9e5f559c471fe7f01af0e33773da0146 274 SUPERFAMILY SSF53335 4 258 4.15E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2021 9e5f559c471fe7f01af0e33773da0146 274 Gene3D G3DSA:3.40.50.150 1 273 1.4E-79 T 14-10-2018 VV1_2021 9e5f559c471fe7f01af0e33773da0146 274 PIRSF PIRSF018249 1 273 1.2E-84 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VV1_2021 9e5f559c471fe7f01af0e33773da0146 274 Pfam PF13847 Methyltransferase domain 88 204 4.7E-13 T 14-10-2018 IPR025714 Methyltransferase domain VV2_1218 e0309848ab30948bf01b30203d6d0b2d 169 Pfam PF11012 Protein of unknown function (DUF2850) 60 139 6.5E-32 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 VV1_0627 ebaa8e85a1101e788b91a8030289d1e3 272 Gene3D G3DSA:3.40.50.1820 1 270 3.5E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0627 ebaa8e85a1101e788b91a8030289d1e3 272 Pfam PF00561 alpha/beta hydrolase fold 23 253 5.5E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0627 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0627 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0627 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0627 ebaa8e85a1101e788b91a8030289d1e3 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.9E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0627 ebaa8e85a1101e788b91a8030289d1e3 272 SUPERFAMILY SSF53474 1 267 7.8E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_2058 580044f63680fc158e2d9ae4077dc335 524 SMART SM00862 24 100 1.2E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2058 580044f63680fc158e2d9ae4077dc335 524 SUPERFAMILY SSF46894 6 103 1.25E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV1_2058 580044f63680fc158e2d9ae4077dc335 524 Gene3D G3DSA:1.10.10.10 5 105 9.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2058 580044f63680fc158e2d9ae4077dc335 524 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.0E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VV1_2058 580044f63680fc158e2d9ae4077dc335 524 Gene3D G3DSA:1.25.40.10 355 516 5.3E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_1884 1b88d323597e7069d69226ba1fb42586 255 Gene3D G3DSA:3.40.50.150 53 188 1.3E-14 T 14-10-2018 VV1_1884 1b88d323597e7069d69226ba1fb42586 255 SUPERFAMILY SSF53335 73 212 1.54E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1884 1b88d323597e7069d69226ba1fb42586 255 Pfam PF08241 Methyltransferase domain 74 125 2.9E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VV1_1670 a356244d15a28394e382c7a7c5a67061 327 Gene3D G3DSA:3.40.50.300 3 326 1.6E-90 T 14-10-2018 VV1_1670 a356244d15a28394e382c7a7c5a67061 327 Pfam PF00005 ABC transporter 26 181 1.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_1670 a356244d15a28394e382c7a7c5a67061 327 SUPERFAMILY SSF52540 5 252 1.85E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1670 a356244d15a28394e382c7a7c5a67061 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV1_1670 a356244d15a28394e382c7a7c5a67061 327 SMART SM00382 34 231 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_1670 a356244d15a28394e382c7a7c5a67061 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.3E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV1_1670 a356244d15a28394e382c7a7c5a67061 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 4.5E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 144 198 8.8E-12 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 Gene3D G3DSA:1.10.10.60 1 57 3.3E-18 T 14-10-2018 VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 SUPERFAMILY SSF48498 84 199 2.72E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 SUPERFAMILY SSF46689 6 76 1.3E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 Gene3D G3DSA:1.10.357.10 60 200 1.4E-28 T 14-10-2018 VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_1388 00b7e5532dd994ebbbc77c22c2ea573f 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 2.7E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0578 ea3e1cdfe8c2e387f157bd461545db39 348 Gene3D G3DSA:2.40.160.10 22 348 2.1E-46 T 14-10-2018 IPR023614 Porin domain superfamily VV2_0578 ea3e1cdfe8c2e387f157bd461545db39 348 SUPERFAMILY SSF56935 22 347 6.11E-45 T 14-10-2018 VV2_0590 619820af4404bd1f1cf9bdd2b744966e 346 Gene3D G3DSA:2.130.10.10 1 340 7.4E-86 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VV2_0590 619820af4404bd1f1cf9bdd2b744966e 346 Pfam PF10282 Lactonase, 7-bladed beta-propeller 8 339 7.2E-97 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller VV2_0590 619820af4404bd1f1cf9bdd2b744966e 346 SUPERFAMILY SSF51004 61 322 8.63E-27 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VV1_2760 d792f11bb52b319da80fe557a318c254 263 SUPERFAMILY SSF53850 37 244 1.58E-13 T 14-10-2018 VV1_1317 bd61204c158041a87ae8fcc6cfbe5c62 263 Gene3D G3DSA:3.10.180.50 3 239 2.8E-89 T 14-10-2018 VV1_1317 bd61204c158041a87ae8fcc6cfbe5c62 263 SMART SM01150 3 262 1.0E-107 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VV1_1317 bd61204c158041a87ae8fcc6cfbe5c62 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 261 1.4E-45 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 VV1_1628 4be3e7e114365ec3837c2480dd177dee 190 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 169 4.6E-29 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VV1_1628 4be3e7e114365ec3837c2480dd177dee 190 SUPERFAMILY SSF55846 5 181 2.36E-66 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VV1_1628 4be3e7e114365ec3837c2480dd177dee 190 Gene3D G3DSA:3.40.80.10 3 187 9.0E-56 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VV1_1628 4be3e7e114365ec3837c2480dd177dee 190 SMART SM00644 18 169 3.4E-58 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VV2_1536 eb6d059b2b786f5b98cb87357d59d3a2 127 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 3.9E-40 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VV2_1536 eb6d059b2b786f5b98cb87357d59d3a2 127 PIRSF PIRSF028770 1 127 3.8E-73 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VV1_1117 c12df03a7dc41c5e38940fe5b1698632 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 4.3E-49 T 14-10-2018 IPR019598 Universal stress protein B VV1_1117 c12df03a7dc41c5e38940fe5b1698632 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.994 T 14-10-2018 IPR019598 Universal stress protein B VV1_1659 da0ffbf31031d68fee595b7b012fbc77 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 3.8E-205 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype VV1_1659 da0ffbf31031d68fee595b7b012fbc77 409 Gene3D G3DSA:1.10.3430.10 2 408 1.8E-118 T 14-10-2018 IPR029020 Ammonium/urea transporter VV1_1659 da0ffbf31031d68fee595b7b012fbc77 409 Pfam PF00909 Ammonium Transporter Family 18 402 5.5E-101 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VV1_1659 da0ffbf31031d68fee595b7b012fbc77 409 SUPERFAMILY SSF111352 12 383 1.7E-105 T 14-10-2018 VV1_1659 da0ffbf31031d68fee595b7b012fbc77 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VV1_3117 ad39936d51f18394c9b30cce865234ae 478 Pfam PF03553 Na+/H+ antiporter family 161 453 9.7E-66 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VV1_3117 ad39936d51f18394c9b30cce865234ae 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.3E-162 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VV1_0096 e1906585edd3fadfdfa88e1936446ad3 115 SUPERFAMILY SSF160719 9 70 3.92E-11 T 14-10-2018 VV1_0096 e1906585edd3fadfdfa88e1936446ad3 115 Gene3D G3DSA:3.10.450.40 2 109 9.5E-6 T 14-10-2018 VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 971 1072 5.3E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 1948 2049 4.9E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 1510 1610 4.7E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 1311 1406 2.0E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 1848 1946 5.0E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 432 530 6.8E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 1409 1509 8.0E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 870 970 3.9E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 772 868 1.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 234 328 6.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Gene3D G3DSA:2.60.40.10 2052 2148 3.0E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV2_1514 7376334a155ca24d23be3e41d485546f 4656 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2875 3000 1.0E-24 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Pfam PF12245 Bacterial Ig-like domain (group 3) 839 866 2.5 T 14-10-2018 IPR022038 Bacterial Ig-like domain VV2_1514 7376334a155ca24d23be3e41d485546f 4656 Pfam PF12245 Bacterial Ig-like domain (group 3) 509 524 3.1 T 14-10-2018 IPR022038 Bacterial Ig-like domain VV2_1514 7376334a155ca24d23be3e41d485546f 4656 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 4564 4654 5.0E-13 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VV1_1999 de5ed31118a8e794bdccf1da14832956 368 SUPERFAMILY SSF52172 22 138 3.7E-33 T 14-10-2018 IPR011006 CheY-like superfamily VV1_1999 de5ed31118a8e794bdccf1da14832956 368 Gene3D G3DSA:3.40.50.2300 9 150 1.2E-33 T 14-10-2018 VV1_1999 de5ed31118a8e794bdccf1da14832956 368 SMART SM00448 20 132 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_1999 de5ed31118a8e794bdccf1da14832956 368 Pfam PF00072 Response regulator receiver domain 23 132 4.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV2_0813 6954cdd3c9df567e126f382caa4af3eb 165 Pfam PF10517 Electron transfer DM13 69 164 2.2E-18 T 14-10-2018 IPR019545 DM13 domain VV2_0389 9a24fe63c79c9765fc3df4fe45ce62c3 107 SUPERFAMILY SSF50022 1 105 1.33E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VV2_0389 9a24fe63c79c9765fc3df4fe45ce62c3 107 Gene3D G3DSA:2.102.10.10 1 106 1.1E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VV2_0389 9a24fe63c79c9765fc3df4fe45ce62c3 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 2.2E-33 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VV2_0389 9a24fe63c79c9765fc3df4fe45ce62c3 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 106 2.9E-41 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VV1_1751 a963990a267c6961c2451445287cbe12 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 61 2.0E-10 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VV1_2661 efb631cf70f299c68d3388661bc1213a 231 SUPERFAMILY SSF52540 24 203 2.53E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2661 efb631cf70f299c68d3388661bc1213a 231 Gene3D G3DSA:3.40.50.300 4 198 1.9E-20 T 14-10-2018 VV2_1102 70cdab8c08e72a13976b704e589f48a9 335 SUPERFAMILY SSF161098 98 311 6.38E-11 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1102 70cdab8c08e72a13976b704e589f48a9 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 328 4.5E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1102 70cdab8c08e72a13976b704e589f48a9 335 Gene3D G3DSA:1.10.3720.10 96 323 9.4E-13 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0836 cae1950efdab8b3a03e18feba91290d6 144 PIRSF PIRSF029598 6 138 1.5E-40 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VV1_0836 cae1950efdab8b3a03e18feba91290d6 144 Pfam PF06146 Phosphate-starvation-inducible E 54 120 1.5E-14 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VV2_0641 e8f9bcbc4847c2e2c57af33845848067 335 Pfam PF06834 TraU protein 29 334 6.1E-114 T 14-10-2018 IPR009649 TraU VV1_2671 2a242604405f0ffcb5a4d2bf41cf87c5 392 Gene3D G3DSA:3.40.50.11010 106 221 1.1E-6 T 14-10-2018 VV1_2671 2a242604405f0ffcb5a4d2bf41cf87c5 392 Gene3D G3DSA:3.40.50.2000 222 368 1.9E-33 T 14-10-2018 VV1_2671 2a242604405f0ffcb5a4d2bf41cf87c5 392 SUPERFAMILY SSF53756 11 391 1.88E-18 T 14-10-2018 VV1_1898 7e67f38a60d6f9a08c3eee363c7ff0a6 281 Pfam PF13230 Glutamine amidotransferases class-II 1 256 4.5E-113 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VV1_1898 7e67f38a60d6f9a08c3eee363c7ff0a6 281 SUPERFAMILY SSF56235 2 253 1.12E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV1_1898 7e67f38a60d6f9a08c3eee363c7ff0a6 281 Gene3D G3DSA:3.60.20.10 1 258 9.7E-100 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV2_0661 e6d41e7e6a10e0e1fb6f88af427d44d7 116 SUPERFAMILY SSF54060 2 114 3.3E-37 T 14-10-2018 VV2_0661 e6d41e7e6a10e0e1fb6f88af427d44d7 116 Pfam PF04231 Endonuclease I 1 111 6.4E-20 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 VV2_0908 7a9d9231a46637c8b1c47bd73b18917d 305 SUPERFAMILY SSF102114 13 256 7.46E-25 T 14-10-2018 VV2_0908 7a9d9231a46637c8b1c47bd73b18917d 305 Gene3D G3DSA:3.20.20.70 5 286 2.3E-26 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV2_0908 7a9d9231a46637c8b1c47bd73b18917d 305 Pfam PF13353 4Fe-4S single cluster domain 19 112 2.3E-5 T 14-10-2018 VV1_3166 19ba6c943635759c65c9b03d3e2cf534 311 Pfam PF03601 Conserved hypothetical protein 698 25 291 1.4E-54 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VV1_2876 44248316030b212799e312d7fbad90f3 343 SUPERFAMILY SSF111369 47 264 1.57E-31 T 14-10-2018 VV1_2876 44248316030b212799e312d7fbad90f3 343 Gene3D G3DSA:1.10.287.470 90 149 2.8E-77 T 14-10-2018 VV1_2876 44248316030b212799e312d7fbad90f3 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 4.5E-87 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VV1_2876 44248316030b212799e312d7fbad90f3 343 Gene3D G3DSA:2.40.30.170 41 267 2.8E-77 T 14-10-2018 VV1_2876 44248316030b212799e312d7fbad90f3 343 Gene3D G3DSA:2.40.420.20 35 334 2.8E-77 T 14-10-2018 VV1_2876 44248316030b212799e312d7fbad90f3 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 247 6.4E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VV1_2876 44248316030b212799e312d7fbad90f3 343 Gene3D G3DSA:2.40.50.100 56 188 2.8E-77 T 14-10-2018 VV1_2805 a8db90322493d4ac9d4b9800f5b5530d 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 17 456 3.9E-56 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV1_2805 a8db90322493d4ac9d4b9800f5b5530d 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 VV1_2805 a8db90322493d4ac9d4b9800f5b5530d 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 456 1.6E-109 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 Gene3D G3DSA:3.30.450.20 18 154 6.3E-10 T 14-10-2018 VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 SMART SM00267 149 326 1.2E-46 T 14-10-2018 IPR000160 GGDEF domain VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 324 2.8E-38 T 14-10-2018 IPR000160 GGDEF domain VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 SUPERFAMILY SSF55073 165 326 5.1E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 SUPERFAMILY SSF55785 23 103 2.66E-7 T 14-10-2018 IPR035965 PAS domain superfamily VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 321 2.4E-41 T 14-10-2018 IPR000160 GGDEF domain VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 Gene3D G3DSA:3.30.70.270 155 327 1.7E-43 T 14-10-2018 VV1_2061 9eb85bad78c97cc515e0b96b5d90ca32 328 Pfam PF08448 PAS fold 28 141 2.9E-7 T 14-10-2018 IPR013656 PAS fold-4 VV2_0124 134837ce3f4ca6b3378984cb146988b7 285 Gene3D G3DSA:3.40.50.2300 89 275 3.1E-98 T 14-10-2018 VV2_0124 134837ce3f4ca6b3378984cb146988b7 285 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 1 279 5.5E-118 T 14-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT VV2_0124 134837ce3f4ca6b3378984cb146988b7 285 SUPERFAMILY SSF53822 2 245 6.83E-30 T 14-10-2018 IPR028082 Periplasmic binding protein-like I VV2_0124 134837ce3f4ca6b3378984cb146988b7 285 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 3 235 2.6E-21 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VV2_0124 134837ce3f4ca6b3378984cb146988b7 285 Gene3D G3DSA:3.40.50.2300 1 251 3.1E-98 T 14-10-2018 VV2_0647 413b9f6e9cf86c0277cf50d37f2f3c0a 137 SUPERFAMILY SSF52833 12 123 1.01E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_0647 413b9f6e9cf86c0277cf50d37f2f3c0a 137 Gene3D G3DSA:3.40.30.10 12 123 1.6E-9 T 14-10-2018 VV2_0647 413b9f6e9cf86c0277cf50d37f2f3c0a 137 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 14 127 1.9E-49 T 14-10-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB VV2_0647 413b9f6e9cf86c0277cf50d37f2f3c0a 137 Pfam PF13728 F plasmid transfer operon protein 22 122 5.1E-17 T 14-10-2018 IPR039555 F plasmid transfer operon protein VV1_2396 78756fbcbed7643fef73a8ac3d80deec 327 SUPERFAMILY SSF56935 153 322 1.1E-5 T 14-10-2018 VV1_2396 78756fbcbed7643fef73a8ac3d80deec 327 Pfam PF11383 Protein of unknown function (DUF3187) 22 322 6.2E-117 T 14-10-2018 IPR021523 Protein of unknown function DUF3187 VV1_1671 1e3b0098971ff9f1eb1913edb2990131 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 306 7.5E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1671 1e3b0098971ff9f1eb1913edb2990131 341 SUPERFAMILY SSF161098 96 287 1.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily VV1_1671 1e3b0098971ff9f1eb1913edb2990131 341 Gene3D G3DSA:1.10.3720.10 90 299 2.7E-17 T 14-10-2018 IPR035906 MetI-like superfamily VV2_0018 7191aef39c6879303d64068d5b1934b9 200 Gene3D G3DSA:2.40.50.140 1 66 1.7E-8 T 14-10-2018 VV2_0018 7191aef39c6879303d64068d5b1934b9 200 SUPERFAMILY SSF50249 2 63 2.25E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV2_0018 7191aef39c6879303d64068d5b1934b9 200 Pfam PF06961 Protein of unknown function (DUF1294) 103 157 1.2E-15 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 VV2_1493 3d31697a8159f489c6dbf9d7b22aee82 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 3.9E-18 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV2_1493 3d31697a8159f489c6dbf9d7b22aee82 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 4.9E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VV2_1493 3d31697a8159f489c6dbf9d7b22aee82 92 Gene3D G3DSA:3.30.2310.20 1 90 3.4E-13 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VV2_0561 d4b129dc9faf43dff6ac12061d419440 348 Pfam PF02628 Cytochrome oxidase assembly protein 13 324 3.4E-84 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 VV1_1442 a19e67979d1667eaf0057ffc88f058e5 192 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 9.9E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1442 a19e67979d1667eaf0057ffc88f058e5 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 3.8E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_1442 a19e67979d1667eaf0057ffc88f058e5 192 Gene3D G3DSA:3.30.700.10 8 192 4.3E-9 T 14-10-2018 VV1_1442 a19e67979d1667eaf0057ffc88f058e5 192 SUPERFAMILY SSF54523 8 104 1.65E-12 T 14-10-2018 VV1_0299 01139c82f7d2408a0407e76c293efc2a 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 516 1.8E-36 T 14-10-2018 IPR000160 GGDEF domain VV1_0299 01139c82f7d2408a0407e76c293efc2a 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 6.2E-35 T 14-10-2018 IPR000160 GGDEF domain VV1_0299 01139c82f7d2408a0407e76c293efc2a 521 Gene3D G3DSA:3.30.70.270 347 520 3.6E-41 T 14-10-2018 VV1_0299 01139c82f7d2408a0407e76c293efc2a 521 SUPERFAMILY SSF55073 366 518 4.08E-36 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_0299 01139c82f7d2408a0407e76c293efc2a 521 SMART SM00267 351 521 2.7E-41 T 14-10-2018 IPR000160 GGDEF domain VV1_0448 5be429db149f05ac58d4a673cfc1a10f 151 Gene3D G3DSA:3.10.580.10 1 150 5.1E-53 T 14-10-2018 VV1_0448 5be429db149f05ac58d4a673cfc1a10f 151 SMART SM00116 84 131 6.1E-6 T 14-10-2018 IPR000644 CBS domain VV1_0448 5be429db149f05ac58d4a673cfc1a10f 151 SMART SM00116 11 59 5.9E-9 T 14-10-2018 IPR000644 CBS domain VV1_0448 5be429db149f05ac58d4a673cfc1a10f 151 Pfam PF00571 CBS domain 4 58 1.3E-13 T 14-10-2018 IPR000644 CBS domain VV1_0448 5be429db149f05ac58d4a673cfc1a10f 151 Pfam PF00571 CBS domain 79 127 9.8E-10 T 14-10-2018 IPR000644 CBS domain VV1_0448 5be429db149f05ac58d4a673cfc1a10f 151 SUPERFAMILY SSF54631 1 132 1.77E-33 T 14-10-2018 VV2_0978 c308574176e07f193418114b511cbd00 110 SUPERFAMILY SSF51182 8 108 1.3E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV2_0978 c308574176e07f193418114b511cbd00 110 Pfam PF07883 Cupin domain 51 108 2.0E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel VV2_0978 c308574176e07f193418114b511cbd00 110 Gene3D G3DSA:2.60.120.10 20 110 1.1E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_2580 b0814c40ef27f2888a55bc1e3a60d9b9 789 Gene3D G3DSA:3.40.50.300 462 605 1.3E-7 T 14-10-2018 VV1_2580 b0814c40ef27f2888a55bc1e3a60d9b9 789 SUPERFAMILY SSF52540 464 634 2.23E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0881 4b981efc0bf7c5a64970f5b553ae79fc 407 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 27 405 1.5E-48 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV2_0881 4b981efc0bf7c5a64970f5b553ae79fc 407 Gene3D G3DSA:2.40.160.60 35 407 8.8E-70 T 14-10-2018 VV2_0881 4b981efc0bf7c5a64970f5b553ae79fc 407 SUPERFAMILY SSF56935 35 407 3.2E-66 T 14-10-2018 VV2_0890 8210b5175c2ea150f5dd8b7fe15bd66e 166 SUPERFAMILY SSF81342 4 166 7.85E-30 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VV2_0890 8210b5175c2ea150f5dd8b7fe15bd66e 166 Pfam PF01292 Prokaryotic cytochrome b561 6 166 3.2E-21 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VV2_0890 8210b5175c2ea150f5dd8b7fe15bd66e 166 Gene3D G3DSA:1.20.950.20 1 156 1.3E-6 T 14-10-2018 VV1_2112 38f0b5ee280e38a552af7e60a429274c 260 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 2.2E-45 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VV1_1940 b5bc58379821cf90cb1e48b32df76255 681 Gene3D G3DSA:3.30.750.140 532 645 6.0E-32 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VV1_1940 b5bc58379821cf90cb1e48b32df76255 681 Pfam PF02120 Flagellar hook-length control protein FliK 552 635 8.6E-25 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VV1_3113 38289e92fb2a86ca459ed31036915aad 286 Gene3D G3DSA:1.10.287.70 23 236 2.1E-58 T 14-10-2018 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 120 146 3.3E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 149 172 3.3E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 178 200 3.3E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 58 81 3.3E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 207 233 3.3E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 84 104 3.3E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 PRINTS PR00169 Potassium channel signature 16 44 3.3E-36 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 Pfam PF00520 Ion transport protein 24 235 2.8E-30 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VV1_3113 38289e92fb2a86ca459ed31036915aad 286 SUPERFAMILY SSF81324 22 235 1.64E-53 T 14-10-2018 VV1_2006 e552ecc055f7b9038911f8c47c5b3c34 381 Gene3D G3DSA:3.30.750.44 133 219 5.2E-7 T 14-10-2018 VV1_2006 e552ecc055f7b9038911f8c47c5b3c34 381 Gene3D G3DSA:2.60.40.10 31 129 3.1E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold VV1_0874 631576b031a72c900f84e30115144b9d 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 1.5E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0874 631576b031a72c900f84e30115144b9d 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 6.9E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0874 631576b031a72c900f84e30115144b9d 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site VV1_0874 631576b031a72c900f84e30115144b9d 147 SUPERFAMILY SSF54523 36 142 1.52E-38 T 14-10-2018 VV1_0874 631576b031a72c900f84e30115144b9d 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 142 3.7E-58 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VV1_0874 631576b031a72c900f84e30115144b9d 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV1_0874 631576b031a72c900f84e30115144b9d 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VV1_0874 631576b031a72c900f84e30115144b9d 147 Gene3D G3DSA:3.30.700.10 33 141 1.7E-45 T 14-10-2018 VV1_0874 631576b031a72c900f84e30115144b9d 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 2.8E-43 T 14-10-2018 IPR013545 Type II secretion system protein G VV1_2017 1582100946f01e9aa5629df1775c3e23 102 Gene3D G3DSA:1.10.3990.20 8 101 1.1E-31 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily VV1_2017 1582100946f01e9aa5629df1775c3e23 102 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.6E-23 T 14-10-2018 IPR027373 Ribbon-helix-helix domain VV1_2767 468d8a4d759fbd8d9197dcd5d485b19a 378 SUPERFAMILY SSF51182 45 375 7.44E-89 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily VV1_2767 468d8a4d759fbd8d9197dcd5d485b19a 378 Gene3D G3DSA:2.60.120.10 68 167 5.4E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold VV1_2767 468d8a4d759fbd8d9197dcd5d485b19a 378 Pfam PF04209 homogentisate 1,2-dioxygenase 88 375 1.1E-20 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VV1_2194 738d12bf9a551890a9b2156b671f8554 179 SUPERFAMILY SSF52540 4 171 9.77E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2194 738d12bf9a551890a9b2156b671f8554 179 Pfam PF13521 AAA domain 4 167 1.1E-38 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain VV1_1780 0ef99f9f142d19a1e243f342d90b975a 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 3.6E-8 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VV1_1780 0ef99f9f142d19a1e243f342d90b975a 184 Gene3D G3DSA:3.10.490.10 1 118 8.5E-8 T 14-10-2018 VV1_1780 0ef99f9f142d19a1e243f342d90b975a 184 SUPERFAMILY SSF110857 1 123 3.14E-16 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VV1_0501 b0c46dd782afca4b7d20c402f01b982a 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 2.6E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain VV1_0501 b0c46dd782afca4b7d20c402f01b982a 494 Pfam PF02554 Carbon starvation protein CstA 4 144 2.4E-33 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VV1_0501 b0c46dd782afca4b7d20c402f01b982a 494 Pfam PF02554 Carbon starvation protein CstA 148 293 2.7E-20 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VV1_1238 c1130aec27799337fab5d61dac1bcb1e 211 Pfam PF00929 Exonuclease 31 193 1.0E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_1238 c1130aec27799337fab5d61dac1bcb1e 211 Gene3D G3DSA:3.30.420.10 23 200 1.1E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_1238 c1130aec27799337fab5d61dac1bcb1e 211 SUPERFAMILY SSF53098 27 198 1.77E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_1238 c1130aec27799337fab5d61dac1bcb1e 211 SMART SM00479 29 202 3.3E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV2_0575 255c9bce6317ef5be2a32eb5b6a77c6d 204 SUPERFAMILY SSF56529 9 188 6.8E-46 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VV2_0575 255c9bce6317ef5be2a32eb5b6a77c6d 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 1.1E-27 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VV2_0575 255c9bce6317ef5be2a32eb5b6a77c6d 204 Gene3D G3DSA:3.90.850.10 7 203 2.0E-46 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VV1_0220 53c034b56ffe73231887b8d66537b1e3 259 Pfam PF02107 Flagellar L-ring protein 80 256 8.0E-58 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV1_0220 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV1_0220 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV1_0220 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV1_0220 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV1_0220 53c034b56ffe73231887b8d66537b1e3 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV1_0220 53c034b56ffe73231887b8d66537b1e3 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.844 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VV1_2839 3fb55868a1f389fd69997f9a17137e6c 500 Gene3D G3DSA:3.40.50.720 20 284 5.2E-33 T 14-10-2018 VV1_2839 3fb55868a1f389fd69997f9a17137e6c 500 Pfam PF13460 NAD(P)H-binding 26 135 1.5E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain VV1_2839 3fb55868a1f389fd69997f9a17137e6c 500 SUPERFAMILY SSF51735 19 312 1.05E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_2839 3fb55868a1f389fd69997f9a17137e6c 500 Pfam PF11066 Protein of unknown function (DUF2867) 350 483 1.2E-12 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 VV1_2110 bff80c452c2b14a994c848c02b0848a5 55 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 1.6E-23 T 14-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VV1_1152 757f88f5203c97f1a3a871e2bc40d859 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.6E-18 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 VV2_0972 7a70487c083ae6872ab0e66c51ffdcdc 300 Gene3D G3DSA:3.10.620.30 90 164 3.3E-11 T 14-10-2018 VV2_0972 7a70487c083ae6872ab0e66c51ffdcdc 300 SUPERFAMILY SSF54001 59 255 9.7E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VV2_0972 7a70487c083ae6872ab0e66c51ffdcdc 300 Pfam PF01841 Transglutaminase-like superfamily 93 152 1.8E-9 T 14-10-2018 IPR002931 Transglutaminase-like VV1_2097 7fd73fe37f5991c40179ab25dc15616c 326 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 323 3.2E-86 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 VV1_2097 7fd73fe37f5991c40179ab25dc15616c 326 Gene3D G3DSA:2.40.128.140 21 324 4.8E-56 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily VV1_0436 1212b2090a5cc05201988da2fbe77bab 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VV1_0436 1212b2090a5cc05201988da2fbe77bab 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.5E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VV1_0436 1212b2090a5cc05201988da2fbe77bab 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 3 107 8.5E-42 T 14-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 VV1_0436 1212b2090a5cc05201988da2fbe77bab 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.4E-57 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 VV1_0436 1212b2090a5cc05201988da2fbe77bab 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.2E-26 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VV1_0436 1212b2090a5cc05201988da2fbe77bab 107 SUPERFAMILY SSF89360 1 96 1.31E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VV1_0436 1212b2090a5cc05201988da2fbe77bab 107 Gene3D G3DSA:2.60.300.12 2 107 1.7E-39 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VV1_2158 c76611ad5083d3b7f55a4466c6dc6bda 486 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 291 443 1.5E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2158 c76611ad5083d3b7f55a4466c6dc6bda 486 Gene3D G3DSA:1.10.287.950 181 482 5.5E-47 T 14-10-2018 VV1_2158 c76611ad5083d3b7f55a4466c6dc6bda 486 SMART SM00283 223 477 8.4E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2158 c76611ad5083d3b7f55a4466c6dc6bda 486 SUPERFAMILY SSF58104 241 481 8.5E-43 T 14-10-2018 VV1_2461 a6531be3656aed923cfdffbed196e346 122 Gene3D G3DSA:3.10.180.10 1 122 3.6E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2461 a6531be3656aed923cfdffbed196e346 122 SUPERFAMILY SSF54593 3 121 1.31E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2461 a6531be3656aed923cfdffbed196e346 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 118 1.4E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV2_0276 472b72e37bd384db6f5a1a2bb4125926 621 Pfam PF07715 TonB-dependent Receptor Plug Domain 3 61 2.7E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain VV2_0276 472b72e37bd384db6f5a1a2bb4125926 621 Pfam PF00593 TonB dependent receptor 154 619 7.1E-61 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VV2_0276 472b72e37bd384db6f5a1a2bb4125926 621 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 1 621 3.4E-167 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VV2_0276 472b72e37bd384db6f5a1a2bb4125926 621 Gene3D G3DSA:2.170.130.10 1 76 1.9E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VV2_0276 472b72e37bd384db6f5a1a2bb4125926 621 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 1 621 2.7E-172 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VV2_0276 472b72e37bd384db6f5a1a2bb4125926 621 Gene3D G3DSA:2.40.170.20 77 621 4.0E-112 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VV2_0276 472b72e37bd384db6f5a1a2bb4125926 621 SUPERFAMILY SSF56935 5 621 1.22E-92 T 14-10-2018 VV2_0129 73976b974b64d1baef1e134f89f23c64 365 Pfam PF08308 PEGA domain 296 360 9.4E-24 T 14-10-2018 IPR013229 PEGA VV1_1686 fae8210296ee498cdbf33715afab4829 340 Pfam PF13609 Gram-negative porin 10 309 2.3E-27 T 14-10-2018 VV1_1686 fae8210296ee498cdbf33715afab4829 340 SUPERFAMILY SSF56935 22 340 1.07E-52 T 14-10-2018 VV1_1686 fae8210296ee498cdbf33715afab4829 340 Gene3D G3DSA:2.40.160.10 22 340 6.7E-65 T 14-10-2018 IPR023614 Porin domain superfamily VV1_1343 64397f510c23b01e22dadb72f321b8af 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 6.9E-79 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1343 64397f510c23b01e22dadb72f321b8af 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1343 64397f510c23b01e22dadb72f321b8af 256 SUPERFAMILY SSF51351 2 250 3.67E-89 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1343 64397f510c23b01e22dadb72f321b8af 256 Gene3D G3DSA:3.20.20.70 1 256 5.5E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_1343 64397f510c23b01e22dadb72f321b8af 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.393 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_1343 64397f510c23b01e22dadb72f321b8af 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VV1_3057 8e4d19bcdef9356e79f5b5092e209800 255 Gene3D G3DSA:3.30.460.10 6 107 2.5E-8 T 14-10-2018 VV1_3057 8e4d19bcdef9356e79f5b5092e209800 255 Pfam PF01909 Nucleotidyltransferase domain 36 72 3.5E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VV1_3057 8e4d19bcdef9356e79f5b5092e209800 255 SUPERFAMILY SSF81301 35 80 2.26E-7 T 14-10-2018 VV2_1491 d83faaa704d5df81692dfd19f10c9d38 244 SUPERFAMILY SSF56436 1 242 3.77E-52 T 14-10-2018 IPR016187 C-type lectin fold VV2_1491 d83faaa704d5df81692dfd19f10c9d38 244 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1 241 9.3E-43 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VV2_1491 d83faaa704d5df81692dfd19f10c9d38 244 Gene3D G3DSA:3.90.1580.10 1 244 1.6E-44 T 14-10-2018 VV2_1675 bdee2c7e5037c88e307655c331572268 261 Pfam PF01636 Phosphotransferase enzyme family 108 164 1.6E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase VV2_1675 bdee2c7e5037c88e307655c331572268 261 SUPERFAMILY SSF56112 8 206 6.12E-29 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV2_1675 bdee2c7e5037c88e307655c331572268 261 Gene3D G3DSA:3.90.1200.10 74 229 3.8E-13 T 14-10-2018 VV1_2105 4f2881b4679f3ea0c68fef30f81f61d2 906 SMART SM01276 452 778 4.0E-41 T 14-10-2018 IPR031161 Peptidase family M60 domain VV1_2105 4f2881b4679f3ea0c68fef30f81f61d2 906 Pfam PF17291 N-terminal domain of M60-like peptidases 449 536 9.5E-6 T 14-10-2018 IPR035423 M60-like domain, N-terminal VV2_0533 3541be44704030a62d18d5bb8ae1e7af 295 PIRSF PIRSF028200 14 294 1.4E-108 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 VV1_2373 e134800f70508d9c1c262f88ca95b199 237 SUPERFAMILY SSF55811 2 156 2.34E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_2373 e134800f70508d9c1c262f88ca95b199 237 Gene3D G3DSA:3.90.79.10 3 158 2.4E-23 T 14-10-2018 VV1_0072 d545c71da6fc7d5bb87b1ecc72cbbdf1 919 Gene3D G3DSA:3.40.1360.10 210 345 7.4E-7 T 14-10-2018 VV1_0072 d545c71da6fc7d5bb87b1ecc72cbbdf1 919 Pfam PF13362 Toprim domain 222 336 1.9E-13 T 14-10-2018 IPR006171 TOPRIM domain VV1_0072 d545c71da6fc7d5bb87b1ecc72cbbdf1 919 SUPERFAMILY SSF57783 5 98 1.65E-9 T 14-10-2018 VV2_1280 b913aef9f47b90dcfecd98fca68177cf 153 SUPERFAMILY SSF56524 18 151 2.49E-15 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VV2_1280 b913aef9f47b90dcfecd98fca68177cf 153 Pfam PF00174 Oxidoreductase molybdopterin binding domain 39 126 1.7E-5 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 VV2_0800 3777f60dd466e48653c1056d483eacfa 219 SUPERFAMILY SSF100950 36 216 1.38E-42 T 14-10-2018 IPR037171 NagB/RpiA transferase-like VV2_0800 3777f60dd466e48653c1056d483eacfa 219 Gene3D G3DSA:3.40.50.10420 35 216 1.8E-37 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VV2_0800 3777f60dd466e48653c1056d483eacfa 219 Pfam PF02589 LUD domain 43 216 1.3E-30 T 14-10-2018 IPR003741 LUD domain VV1_2662 d0f2a93b884637272dcfb096da7b380d 263 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 20 250 2.8E-52 T 14-10-2018 VV1_2662 d0f2a93b884637272dcfb096da7b380d 263 SUPERFAMILY SSF53850 16 222 1.7E-19 T 14-10-2018 VV1_2662 d0f2a93b884637272dcfb096da7b380d 263 Gene3D G3DSA:3.40.190.10 99 199 2.7E-36 T 14-10-2018 VV1_2662 d0f2a93b884637272dcfb096da7b380d 263 Gene3D G3DSA:3.40.190.10 20 227 2.7E-36 T 14-10-2018 VV1_0033 179360abc9098c747ef502cc50807d66 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 2.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_0033 179360abc9098c747ef502cc50807d66 285 SUPERFAMILY SSF161098 8 285 2.9E-65 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0033 179360abc9098c747ef502cc50807d66 285 Gene3D G3DSA:1.10.3720.10 1 276 8.4E-54 T 14-10-2018 IPR035906 MetI-like superfamily VV1_0085 a70a1c42414717ba7e5377419bcaa339 335 Pfam PF05954 Phage late control gene D protein (GPD) 104 313 3.7E-10 T 14-10-2018 VV1_0085 a70a1c42414717ba7e5377419bcaa339 335 SUPERFAMILY SSF69279 6 175 6.38E-17 T 14-10-2018 VV1_1944 97031e83330a60d2bf47e06bd584626c 140 Pfam PF04347 Flagellar biosynthesis protein, FliO 58 136 1.3E-18 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VV1_1944 97031e83330a60d2bf47e06bd584626c 140 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 46 113 1.6E-21 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VV1_2618 4e59b50b824b17ca0b2e00f19c3cf5bb 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 6.0E-12 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VV1_1835 8d4df89d7fda3a1c8259da9050d3a4bd 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 5.7E-21 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 VV1_0226 e604e3563d82ea92be427f3806a1352a 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 2.6E-28 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VV1_0226 e604e3563d82ea92be427f3806a1352a 131 PIRSF PIRSF002889 1 131 2.3E-32 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VV1_2150 19cfbbb21e54c00d7a6515f7cdf99e2c 330 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 8 323 3.0E-170 T 14-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein VV1_2150 19cfbbb21e54c00d7a6515f7cdf99e2c 330 Pfam PF14397 Sugar-transfer associated ATP-grasp 25 298 7.5E-115 T 14-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VV1_2150 19cfbbb21e54c00d7a6515f7cdf99e2c 330 SUPERFAMILY SSF56059 46 283 4.04E-20 T 14-10-2018 VV2_0891 8922e31d95468d14482df10cf00c78d7 93 Pfam PF13670 Peptidase propeptide and YPEB domain 8 90 1.3E-23 T 14-10-2018 IPR025711 PepSY domain VV2_0911 8df908fec657776435b860d102d7ee29 211 Pfam PF12408 Ribose-5-phosphate isomerase 163 209 7.2E-23 T 14-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal VV2_0911 8df908fec657776435b860d102d7ee29 211 SUPERFAMILY SSF89623 1 160 6.8E-35 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VV2_0911 8df908fec657776435b860d102d7ee29 211 Gene3D G3DSA:3.40.1400.10 1 211 4.7E-100 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VV2_0911 8df908fec657776435b860d102d7ee29 211 Pfam PF02502 Ribose/Galactose Isomerase 3 136 6.6E-28 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VV1_2776 2c9a6eb1ab859f70cb7428f34d7d0580 76 SUPERFAMILY SSF52833 3 72 4.28E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_2776 2c9a6eb1ab859f70cb7428f34d7d0580 76 Gene3D G3DSA:3.40.30.10 1 73 1.7E-15 T 14-10-2018 VV1_2776 2c9a6eb1ab859f70cb7428f34d7d0580 76 Pfam PF00462 Glutaredoxin 4 60 1.8E-12 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VV1_2776 2c9a6eb1ab859f70cb7428f34d7d0580 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VV2_0324 c2422fbb5814c6f27de7fddfc3301efb 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 6.9E-51 T 14-10-2018 IPR021422 Protein of unknown function DUF3069 VV2_0324 c2422fbb5814c6f27de7fddfc3301efb 145 SUPERFAMILY SSF158675 1 145 1.01E-53 T 14-10-2018 IPR023132 Sama2622-like superfamily VV2_0324 c2422fbb5814c6f27de7fddfc3301efb 145 Gene3D G3DSA:1.10.3440.10 14 144 8.4E-6 T 14-10-2018 IPR023132 Sama2622-like superfamily VV1_2376 400edb7f8ba47d6e6207b9f56df99305 258 SMART SM00954 103 211 0.0083 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 VV1_2376 400edb7f8ba47d6e6207b9f56df99305 258 SUPERFAMILY SSF81301 64 221 1.8E-16 T 14-10-2018 VV1_2376 400edb7f8ba47d6e6207b9f56df99305 258 Gene3D G3DSA:3.30.460.10 73 195 4.0E-6 T 14-10-2018 VV2_0035 c8c9c7f15aa7f0ae4527966acd084dca 126 SUPERFAMILY SSF52091 4 125 9.81E-38 T 14-10-2018 IPR036513 STAS domain superfamily VV2_0035 c8c9c7f15aa7f0ae4527966acd084dca 126 Gene3D G3DSA:3.40.50.10600 1 125 3.8E-43 T 14-10-2018 IPR038396 SpoIIAA-like superfamily VV2_0035 c8c9c7f15aa7f0ae4527966acd084dca 126 Pfam PF11964 SpoIIAA-like 20 124 1.3E-17 T 14-10-2018 IPR021866 SpoIIAA-like VV1_1324 36c4d3aa436114131498a363e815260b 199 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 15 196 47.716 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VV1_1324 36c4d3aa436114131498a363e815260b 199 Gene3D G3DSA:3.40.50.360 19 191 1.2E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1324 36c4d3aa436114131498a363e815260b 199 SUPERFAMILY SSF52218 19 192 6.4E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily VV1_1324 36c4d3aa436114131498a363e815260b 199 Pfam PF02525 Flavodoxin-like fold 20 186 3.5E-42 T 14-10-2018 IPR003680 Flavodoxin-like fold VV1_2125 b59028b347be80305663702545a93801 141 Pfam PF05433 Glycine zipper 2TM domain 46 80 2.7E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VV1_0890 2f37d8cf9c16cee1a5805723ef8cdc89 178 Pfam PF13511 Domain of unknown function (DUF4124) 9 57 2.2E-11 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 VV1_0897 c0e8d3a473286aed5ea7dfa98022bb66 268 SUPERFAMILY SSF53335 103 254 2.81E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_0897 c0e8d3a473286aed5ea7dfa98022bb66 268 Gene3D G3DSA:3.40.50.150 98 259 1.3E-10 T 14-10-2018 VV1_0897 c0e8d3a473286aed5ea7dfa98022bb66 268 Pfam PF13489 Methyltransferase domain 117 248 1.0E-16 T 14-10-2018 VV1_1471 93cb773c6792617a4b2398b905f9ab09 154 Pfam PF09834 Predicted membrane protein (DUF2061) 84 133 6.6E-20 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VV1_1471 93cb773c6792617a4b2398b905f9ab09 154 Pfam PF09834 Predicted membrane protein (DUF2061) 19 70 1.8E-21 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VV2_0680 9ce23a5406ad5a55de8f3a24f50a18af 412 SUPERFAMILY SSF103473 15 387 2.88E-34 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0680 9ce23a5406ad5a55de8f3a24f50a18af 412 Pfam PF07690 Major Facilitator Superfamily 9 347 7.1E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0680 9ce23a5406ad5a55de8f3a24f50a18af 412 Gene3D G3DSA:1.20.1250.20 5 388 8.4E-29 T 14-10-2018 VV2_1679 e4ae137ac6c7a5e2f3f7f6b3f557c0b1 310 SUPERFAMILY SSF64182 3 307 2.75E-12 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily VV2_1679 e4ae137ac6c7a5e2f3f7f6b3f557c0b1 310 PIRSF PIRSF028235 1 310 5.3E-217 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 VV2_1300 b5faad7a0373e44e6def924f9f6fb62a 533 Gene3D G3DSA:2.60.120.200 51 344 8.7E-90 T 14-10-2018 VV2_1300 b5faad7a0373e44e6def924f9f6fb62a 533 SUPERFAMILY SSF49899 50 337 1.9E-80 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VV2_1300 b5faad7a0373e44e6def924f9f6fb62a 533 Pfam PF00722 Glycosyl hydrolases family 16 95 274 3.1E-23 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF03471 Transporter associated domain 344 417 4.7E-17 T 14-10-2018 IPR005170 Transporter-associated domain VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 SMART SM01091 342 420 1.1E-22 T 14-10-2018 IPR005170 Transporter-associated domain VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 Gene3D G3DSA:3.10.580.10 201 330 3.9E-42 T 14-10-2018 VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 SUPERFAMILY SSF56176 340 421 1.47E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 SUPERFAMILY SSF54631 192 329 7.58E-25 T 14-10-2018 VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF00571 CBS domain 278 326 1.1E-5 T 14-10-2018 IPR000644 CBS domain VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 Gene3D G3DSA:3.30.465.10 340 418 3.3E-27 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VV1_1609 75c99fa2985c006dea84a5ec186fc5a9 425 Pfam PF01595 Domain of unknown function DUF21 13 181 4.1E-49 T 14-10-2018 IPR002550 CNNM, transmembrane domain VV1_0386 dfe49d8c972f45d7607212da9b140939 98 Pfam PF01527 Transposase 9 83 1.6E-16 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VV1_0386 dfe49d8c972f45d7607212da9b140939 98 Gene3D G3DSA:1.10.10.60 15 94 2.0E-11 T 14-10-2018 VV1_0386 dfe49d8c972f45d7607212da9b140939 98 SUPERFAMILY SSF46689 10 95 3.76E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0004 b29e6668ac14aa10a26cd896d480958f 352 Pfam PF07364 Metallopeptidase family M81 2 120 2.8E-21 T 14-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal VV1_0004 b29e6668ac14aa10a26cd896d480958f 352 Pfam PF07171 MlrC C-terminus 157 335 1.2E-38 T 14-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal VV1_0915 8d0cd5f8d9ba72615d2ff3f2aa7a9a27 163 SUPERFAMILY SSF46689 21 137 2.42E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_0915 8d0cd5f8d9ba72615d2ff3f2aa7a9a27 163 Pfam PF13551 Winged helix-turn helix 29 88 8.3E-14 T 14-10-2018 VV1_0915 8d0cd5f8d9ba72615d2ff3f2aa7a9a27 163 Gene3D G3DSA:1.10.10.10 29 83 4.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_0915 8d0cd5f8d9ba72615d2ff3f2aa7a9a27 163 Pfam PF13592 Winged helix-turn helix 104 161 3.6E-15 T 14-10-2018 IPR025959 Winged helix-turn helix domain VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 SUPERFAMILY SSF53271 69 306 8.14E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.586 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 5.4E-125 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Gene3D G3DSA:3.40.50.2020 7 302 9.1E-135 T 14-10-2018 VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 SMART SM01400 4 121 7.0E-78 T 14-10-2018 VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.7E-30 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Gene3D G3DSA:3.40.50.2020 148 290 9.1E-135 T 14-10-2018 VV1_0257 b296dfb4f4d0aaf11e871dcbd2699f5e 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.3E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VV2_0181 b103cc5cf5d0bf01e3b45178744b4a6e 132 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 33 131 1.5E-9 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system VV1_2809 23c7180677bde6a62f4b328f5057fbd6 219 Gene3D G3DSA:2.60.120.620 1 216 9.4E-53 T 14-10-2018 VV1_2809 23c7180677bde6a62f4b328f5057fbd6 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 5.5E-54 T 14-10-2018 IPR018724 2OG-Fe dioxygenase VV2_0249 1fd2bb05d31973da5c503e5bcac23622 415 SUPERFAMILY SSF56935 22 414 2.52E-91 T 14-10-2018 VV2_0249 1fd2bb05d31973da5c503e5bcac23622 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 414 7.6E-127 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VV2_0249 1fd2bb05d31973da5c503e5bcac23622 415 Gene3D G3DSA:2.40.160.60 22 415 3.0E-125 T 14-10-2018 VV2_1130 4e2037bfc9880996faca4ae7097470c9 488 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 53 440 5.4E-110 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VV2_1130 4e2037bfc9880996faca4ae7097470c9 488 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 448 3.9E-81 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VV1_0683 1b38d68bae1637bd49347b5a647473aa 162 Pfam PF02470 MlaD protein 40 118 1.9E-19 T 14-10-2018 IPR003399 Mce/MlaD VV1_0683 1b38d68bae1637bd49347b5a647473aa 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.1E-54 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VV1_0370 dad5d52064f89195616288ae624f3f2a 169 SUPERFAMILY SSF55961 27 168 2.65E-32 T 14-10-2018 VV1_0370 dad5d52064f89195616288ae624f3f2a 169 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 36 161 1.9E-30 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VV1_0370 dad5d52064f89195616288ae624f3f2a 169 Gene3D G3DSA:3.30.530.20 27 169 3.0E-37 T 14-10-2018 IPR023393 START-like domain superfamily VV1_1966 485be2fe06f01812fe948e807c06f13d 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 3.1E-258 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 Pfam PF01578 Cytochrome C assembly protein 89 297 2.2E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.4E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 5.6E-126 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_1966 485be2fe06f01812fe948e807c06f13d 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 4.9E-63 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_2817 803c58c11d441c9108d0a0b5e86f596d 120 Pfam PF00072 Response regulator receiver domain 6 106 1.4E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VV1_2817 803c58c11d441c9108d0a0b5e86f596d 120 SUPERFAMILY SSF52172 1 105 2.56E-14 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2817 803c58c11d441c9108d0a0b5e86f596d 120 Gene3D G3DSA:3.40.50.2300 1 112 7.2E-12 T 14-10-2018 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 Gene3D G3DSA:3.30.565.10 310 461 7.0E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 3.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF00672 HAMP domain 191 238 1.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 SUPERFAMILY SSF47384 230 305 1.96E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 SMART SM00387 350 460 1.6E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 168 2.9E-60 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 SMART SM00304 190 243 9.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 SMART SM00388 244 306 6.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 Gene3D G3DSA:3.30.450.210 31 157 1.9E-50 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 458 4.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 304 3.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 Gene3D G3DSA:1.10.287.130 194 307 1.0E-33 T 14-10-2018 VV1_1253 eaa2961bd7455094af793bf163dbf8fd 462 SUPERFAMILY SSF55874 296 458 1.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0463 2055b6f7cb67a43eef5a6deb68f60f1d 326 Gene3D G3DSA:3.40.50.2300 71 298 2.7E-10 T 14-10-2018 VV2_0463 2055b6f7cb67a43eef5a6deb68f60f1d 326 Gene3D G3DSA:3.40.50.2300 139 267 2.7E-10 T 14-10-2018 VV2_1033 5e19b32631c75c7cec32c8308b54e118 178 SUPERFAMILY SSF55729 1 137 1.42E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV2_1033 5e19b32631c75c7cec32c8308b54e118 178 Gene3D G3DSA:3.40.630.30 2 176 2.5E-29 T 14-10-2018 VV2_1033 5e19b32631c75c7cec32c8308b54e118 178 Pfam PF13508 Acetyltransferase (GNAT) domain 52 131 4.6E-9 T 14-10-2018 IPR000182 GNAT domain VV2_0440 30da6920b6c2d02ca6ef6df3980c618f 231 PIRSF PIRSF029287 1 229 3.3E-31 T 14-10-2018 IPR017748 T6S-associated protein TagF VV2_0440 30da6920b6c2d02ca6ef6df3980c618f 231 Gene3D G3DSA:3.40.1730.10 8 230 2.3E-58 T 14-10-2018 IPR038225 T6S-associated protein TagF superfamily VV2_0440 30da6920b6c2d02ca6ef6df3980c618f 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 5.6E-45 T 14-10-2018 IPR017748 T6S-associated protein TagF VV2_0440 30da6920b6c2d02ca6ef6df3980c618f 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 140 1.5E-38 T 14-10-2018 IPR017748 T6S-associated protein TagF VV1_2751 bc94a7d895a0711143840ee4ab114b89 280 SUPERFAMILY SSF161098 7 277 1.57E-53 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2751 bc94a7d895a0711143840ee4ab114b89 280 Gene3D G3DSA:1.10.3720.10 3 273 1.9E-49 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2751 bc94a7d895a0711143840ee4ab114b89 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 275 4.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_3177 5ebcbbc62c70a1303c61de86eccb4ac6 107 SUPERFAMILY SSF56349 3 78 5.59E-6 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV1_3177 5ebcbbc62c70a1303c61de86eccb4ac6 107 Gene3D G3DSA:1.10.443.10 1 86 6.4E-7 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_0411 88d7d3b4475d819400374df93ca796e8 671 ProSitePatterns PS01303 BCCT family of transporters signature. 355 364 - T 14-10-2018 IPR018093 BCCT transporter, conserved site VV1_0411 88d7d3b4475d819400374df93ca796e8 671 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 47 536 2.1E-156 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VV1_0411 88d7d3b4475d819400374df93ca796e8 671 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 537 4.1E-145 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 620 5.0E-62 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 Pfam PF01578 Cytochrome C assembly protein 89 295 2.4E-42 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV1_3031 6565ed700434da9b5f6251a2a84ef2c7 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 8.5E-71 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VV2_0827 11b52a9b824e6943f0455b3f465f79f6 680 SUPERFAMILY SSF63829 412 644 1.11E-5 T 14-10-2018 VV2_0827 11b52a9b824e6943f0455b3f465f79f6 680 Pfam PF05787 Bacterial protein of unknown function (DUF839) 76 643 1.9E-150 T 14-10-2018 IPR008557 Protein of unknown function DUF839 VV2_0230 a7dfb172f429d9b79bff0670c37b3825 179 SUPERFAMILY SSF81342 3 176 6.59E-38 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VV2_0230 a7dfb172f429d9b79bff0670c37b3825 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 4.6E-32 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VV2_0230 a7dfb172f429d9b79bff0670c37b3825 179 Gene3D G3DSA:1.20.950.20 2 83 1.1E-5 T 14-10-2018 VV1_0762 2ff5d8db50135fc9335f30d0c18f2254 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.03 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0762 2ff5d8db50135fc9335f30d0c18f2254 209 Gene3D G3DSA:2.40.30.10 129 209 5.6E-20 T 14-10-2018 VV1_0762 2ff5d8db50135fc9335f30d0c18f2254 209 Pfam PF00297 Ribosomal protein L3 49 182 9.0E-16 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0762 2ff5d8db50135fc9335f30d0c18f2254 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.2E-94 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV1_0762 2ff5d8db50135fc9335f30d0c18f2254 209 SUPERFAMILY SSF50447 1 208 8.65E-84 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VV1_0762 2ff5d8db50135fc9335f30d0c18f2254 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site VV1_0762 2ff5d8db50135fc9335f30d0c18f2254 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 14-10-2018 VV1_1854 90ab4158aba06a303f45297e7fa369e4 104 PIRSF PIRSF006257 1 104 8.3E-41 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 VV1_1854 90ab4158aba06a303f45297e7fa369e4 104 Pfam PF04287 tRNA pseudouridine synthase C 8 101 5.1E-31 T 14-10-2018 IPR023376 YqcC-like domain VV1_1854 90ab4158aba06a303f45297e7fa369e4 104 Gene3D G3DSA:1.20.1440.40 1 103 5.6E-31 T 14-10-2018 IPR036814 YqcC-like superfamily VV1_1854 90ab4158aba06a303f45297e7fa369e4 104 SUPERFAMILY SSF158452 1 102 6.15E-33 T 14-10-2018 IPR036814 YqcC-like superfamily VV2_0460 028fbc0dac8fed8760d1a6c5a104a9f6 275 Pfam PF00892 EamA-like transporter family 138 263 2.2E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV1_2070 91523d6fb8cb00a59ab2ca51572ec2c8 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 187 2.9E-74 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB VV1_2070 91523d6fb8cb00a59ab2ca51572ec2c8 196 Gene3D G3DSA:3.40.50.10610 39 188 1.0E-43 T 14-10-2018 VV1_2070 91523d6fb8cb00a59ab2ca51572ec2c8 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 3.5E-55 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB VV1_2123 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VV1_2123 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 VV1_2123 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold VV1_2123 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VV1_2123 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VV1_2123 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 14-10-2018 VV2_0364 03d586e057e8ffa68b393fbd22b1f31e 255 Pfam PF11932 Protein of unknown function (DUF3450) 8 247 1.7E-83 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VV2_0364 03d586e057e8ffa68b393fbd22b1f31e 255 PIRSF PIRSF028069 1 255 3.6E-102 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VV2_1188 5a28512b3313c41101794e0a441fa506 231 Pfam PF00005 ABC transporter 21 169 2.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_1188 5a28512b3313c41101794e0a441fa506 231 SMART SM00382 30 217 6.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_1188 5a28512b3313c41101794e0a441fa506 231 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_1188 5a28512b3313c41101794e0a441fa506 231 SUPERFAMILY SSF52540 1 224 1.17E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1188 5a28512b3313c41101794e0a441fa506 231 Gene3D G3DSA:3.40.50.300 1 228 5.2E-64 T 14-10-2018 VV1_2175 de7a529d572e695f1063adc2b3e15bee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 7.1E-11 T 14-10-2018 IPR007140 Protein of unknown function DUF350 VV1_2175 de7a529d572e695f1063adc2b3e15bee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 2.4E-12 T 14-10-2018 IPR007140 Protein of unknown function DUF350 VV2_1520 57e0cfd5454d825f72f5e3bbf40daddc 240 Pfam PF00194 Eukaryotic-type carbonic anhydrase 23 238 3.8E-50 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain VV2_1520 57e0cfd5454d825f72f5e3bbf40daddc 240 Gene3D G3DSA:3.10.200.10 23 238 1.2E-80 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VV2_1520 57e0cfd5454d825f72f5e3bbf40daddc 240 SUPERFAMILY SSF51069 23 237 1.22E-72 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VV2_1520 57e0cfd5454d825f72f5e3bbf40daddc 240 SMART SM01057 24 239 4.7E-90 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain VV2_1520 57e0cfd5454d825f72f5e3bbf40daddc 240 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 110 126 - T 14-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 VV1_2993 9167504ac66489b1967b04342096f532 392 Gene3D G3DSA:3.40.1090.10 133 238 3.5E-7 T 14-10-2018 VV1_2993 9167504ac66489b1967b04342096f532 392 Gene3D G3DSA:3.40.1090.10 15 122 2.7E-9 T 14-10-2018 VV1_2993 9167504ac66489b1967b04342096f532 392 SUPERFAMILY SSF52151 25 298 2.88E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VV1_2993 9167504ac66489b1967b04342096f532 392 Pfam PF01734 Patatin-like phospholipase 30 197 1.7E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VV1_3062 c8be55b5c1eed7ac9113348044d6b7a1 206 Pfam PF01300 Telomere recombination 23 198 1.6E-45 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VV1_3062 c8be55b5c1eed7ac9113348044d6b7a1 206 SUPERFAMILY SSF55821 1 203 5.49E-64 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VV1_3062 c8be55b5c1eed7ac9113348044d6b7a1 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.0E-70 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 VV1_3062 c8be55b5c1eed7ac9113348044d6b7a1 206 Gene3D G3DSA:3.90.870.10 1 205 1.1E-67 T 14-10-2018 VV1_3098 dff030101bbaf8e50ffd0ae92dd5c123 230 PIRSF PIRSF006102 1 219 5.9E-79 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV1_3098 dff030101bbaf8e50ffd0ae92dd5c123 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.8E-88 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VV1_3098 dff030101bbaf8e50ffd0ae92dd5c123 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.186 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VV1_3098 dff030101bbaf8e50ffd0ae92dd5c123 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 3.6E-66 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV1_1800 98e07ccc52bcd0d943b22a97afd51814 155 Pfam PF11012 Protein of unknown function (DUF2850) 69 146 2.0E-31 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 VV1_2090 7b77d371d49548d31f91a555ce5ab0a6 510 Pfam PF04293 SpoVR like protein 17 447 5.9E-178 T 14-10-2018 IPR007390 Sporulation stage V, protein R VV1_0734 c88317a92914bc24f8c6ed0855c63a22 157 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 44 150 1.5E-21 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VV2_0822 7cfb01dd678db4c2de1dadaec2c83aae 387 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 172 349 1.4E-10 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain VV2_0822 7cfb01dd678db4c2de1dadaec2c83aae 387 SUPERFAMILY SSF52266 166 380 1.68E-15 T 14-10-2018 VV2_0822 7cfb01dd678db4c2de1dadaec2c83aae 387 Gene3D G3DSA:2.60.120.260 41 160 6.5E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV2_0822 7cfb01dd678db4c2de1dadaec2c83aae 387 Gene3D G3DSA:3.40.50.1110 165 383 7.1E-49 T 14-10-2018 IPR036514 SGNH hydrolase superfamily VV1_3224 a3701e4514b6e84e04e40cf6d93fe159 77 Pfam PF04964 Flp/Fap pilin component 24 71 3.9E-12 T 14-10-2018 IPR007047 Flp/Fap pilin component VV2_0740 b182fb7cff27e2d6cf289542f32aa5f3 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 9.0E-56 T 14-10-2018 IPR014176 Phasin, subfamily 3 VV2_0740 b182fb7cff27e2d6cf289542f32aa5f3 115 Pfam PF09361 Phasin protein 8 108 1.6E-20 T 14-10-2018 IPR018968 Phasin VV2_0740 b182fb7cff27e2d6cf289542f32aa5f3 115 PIRSF PIRSF028226 1 115 1.3E-57 T 14-10-2018 IPR014176 Phasin, subfamily 3 VV2_0760 5a24c2fcfae7d0d7411a0c551f7effac 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 400 1.9E-46 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_0760 5a24c2fcfae7d0d7411a0c551f7effac 442 PIRSF PIRSF006603 2 441 5.0E-82 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_0760 5a24c2fcfae7d0d7411a0c551f7effac 442 Pfam PF01554 MatE 18 178 3.5E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_0760 5a24c2fcfae7d0d7411a0c551f7effac 442 Pfam PF01554 MatE 237 388 3.7E-14 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_0166 50187059e13f64680acdf2a2e4b71f97 410 Gene3D G3DSA:1.20.1250.20 3 401 4.3E-56 T 14-10-2018 VV2_0166 50187059e13f64680acdf2a2e4b71f97 410 Pfam PF07690 Major Facilitator Superfamily 15 295 1.2E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0166 50187059e13f64680acdf2a2e4b71f97 410 SUPERFAMILY SSF103473 9 399 1.83E-56 T 14-10-2018 IPR036259 MFS transporter superfamily VV1_0795 7d0fdca78481c59b0207094b51a3b34e 749 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 51 743 2.2E-269 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VV1_1451 b85dffe44deb41990245771c4d8f0730 162 PIRSF PIRSF018472 1 162 1.5E-41 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VV1_1451 b85dffe44deb41990245771c4d8f0730 162 Pfam PF04093 rod shape-determining protein MreD 9 154 1.1E-39 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VV1_1451 b85dffe44deb41990245771c4d8f0730 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 9.5E-38 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VV1_1754 d3cec92b02b9218c02cf71640ef48558 416 Gene3D G3DSA:3.40.50.300 165 401 1.4E-42 T 14-10-2018 VV1_1754 d3cec92b02b9218c02cf71640ef48558 416 Pfam PF13614 AAA domain 167 322 2.4E-6 T 14-10-2018 IPR025669 AAA domain VV1_1754 d3cec92b02b9218c02cf71640ef48558 416 SUPERFAMILY SSF52540 166 402 2.6E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_0535 fadc0be61695b2717c228227576d3de7 136 SUPERFAMILY SSF47413 2 61 2.29E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV2_0535 fadc0be61695b2717c228227576d3de7 136 Gene3D G3DSA:1.10.260.40 2 66 3.8E-5 T 14-10-2018 VV2_1105 e528609f358c13bed0783bfbb6f17bd8 573 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 18 356 7.7E-96 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VV2_1105 e528609f358c13bed0783bfbb6f17bd8 573 PIRSF PIRSF014753 1 573 7.4E-179 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VV1_0050 ce8be32359cee68013ef43da33ac137b 455 Pfam PF00501 AMP-binding enzyme 22 314 9.8E-16 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VV1_0050 ce8be32359cee68013ef43da33ac137b 455 SUPERFAMILY SSF56801 30 454 3.01E-52 T 14-10-2018 VV1_0050 ce8be32359cee68013ef43da33ac137b 455 Gene3D G3DSA:3.40.50.12780 15 331 3.1E-23 T 14-10-2018 VV1_0050 ce8be32359cee68013ef43da33ac137b 455 Gene3D G3DSA:3.30.300.30 346 452 1.9E-13 T 14-10-2018 VV1_1604 2be3cd98c4d5de0b7595727054f0e0ea 153 Pfam PF09335 SNARE associated Golgi protein 54 148 6.1E-10 T 14-10-2018 IPR032816 SNARE associated Golgi protein VV1_0054 11c0d2177c762c11c0919bfe7666bb4b 148 SUPERFAMILY SSF54637 9 145 2.01E-30 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_0054 11c0d2177c762c11c0919bfe7666bb4b 148 Gene3D G3DSA:3.10.129.10 11 140 2.3E-26 T 14-10-2018 VV1_0054 11c0d2177c762c11c0919bfe7666bb4b 148 Pfam PF13279 Thioesterase-like superfamily 18 120 2.8E-12 T 14-10-2018 VV2_0002 b09ac5315523c70f332c837db84709bf 397 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VV2_0002 b09ac5315523c70f332c837db84709bf 397 Gene3D G3DSA:3.40.50.300 30 323 2.7E-70 T 14-10-2018 VV2_0002 b09ac5315523c70f332c837db84709bf 397 SMART SM00382 52 253 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain VV2_0002 b09ac5315523c70f332c837db84709bf 397 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 385 1.9E-196 T 14-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 VV2_0002 b09ac5315523c70f332c837db84709bf 397 Pfam PF00005 ABC transporter 44 195 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV2_0002 b09ac5315523c70f332c837db84709bf 397 SUPERFAMILY SSF52540 42 273 1.27E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2333 7b0a1b282e21d28c959648b47e46bdd8 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 127 178 1.9E-6 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VV1_2333 7b0a1b282e21d28c959648b47e46bdd8 358 Gene3D G3DSA:3.40.50.2300 1 116 2.0E-16 T 14-10-2018 VV1_2333 7b0a1b282e21d28c959648b47e46bdd8 358 SUPERFAMILY SSF52172 25 119 6.91E-6 T 14-10-2018 IPR011006 CheY-like superfamily VV1_2333 7b0a1b282e21d28c959648b47e46bdd8 358 Gene3D G3DSA:3.40.50.300 125 357 1.1E-30 T 14-10-2018 VV1_2333 7b0a1b282e21d28c959648b47e46bdd8 358 SUPERFAMILY SSF52540 126 355 8.79E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1469 8c310b1b1563f7f335715cf63b44ce54 258 SUPERFAMILY SSF49785 2 156 2.72E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV1_1469 8c310b1b1563f7f335715cf63b44ce54 258 Gene3D G3DSA:2.60.120.260 35 156 8.8E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily VV1_1043 bc8e42d8708ed3cda1b0b06036f5c405 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 211 1.5E-66 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 VV1_1043 bc8e42d8708ed3cda1b0b06036f5c405 214 Pfam PF03006 Haemolysin-III related 7 204 9.7E-38 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VV1_1001 864b9ac46221c2540fe809d1a8738f33 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site VV1_1001 864b9ac46221c2540fe809d1a8738f33 250 Gene3D G3DSA:3.40.190.10 93 205 8.4E-29 T 14-10-2018 VV1_1001 864b9ac46221c2540fe809d1a8738f33 250 SUPERFAMILY SSF53850 1 248 9.45E-57 T 14-10-2018 VV1_1001 864b9ac46221c2540fe809d1a8738f33 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 7.5E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_1001 864b9ac46221c2540fe809d1a8738f33 250 SMART SM00062 26 247 3.2E-75 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VV1_2988 07d909859b5376d7ef61265d725ed44a 465 SUPERFAMILY SSF56672 20 223 1.35E-26 T 14-10-2018 VV1_2988 07d909859b5376d7ef61265d725ed44a 465 Pfam PF00817 impB/mucB/samB family 17 146 8.4E-6 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VV2_1092 eacaadf2a46b384c8d474be40e515c50 389 Pfam PF07470 Glycosyl Hydrolase Family 88 47 379 1.8E-26 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 VV2_1092 eacaadf2a46b384c8d474be40e515c50 389 SUPERFAMILY SSF48208 20 389 2.11E-99 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VV2_1092 eacaadf2a46b384c8d474be40e515c50 389 Gene3D G3DSA:1.50.10.10 7 389 9.8E-116 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VV1_3188 f6b02fddb750ab5da892fa98ceb63dde 458 Pfam PF00271 Helicase conserved C-terminal domain 257 353 3.1E-5 T 14-10-2018 IPR001650 Helicase, C-terminal VV1_3188 f6b02fddb750ab5da892fa98ceb63dde 458 SMART SM00487 2 175 0.0065 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VV1_3188 f6b02fddb750ab5da892fa98ceb63dde 458 SUPERFAMILY SSF52540 17 356 2.17E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_3188 f6b02fddb750ab5da892fa98ceb63dde 458 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.7E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VV1_3188 f6b02fddb750ab5da892fa98ceb63dde 458 Gene3D G3DSA:3.40.50.300 180 381 8.4E-24 T 14-10-2018 VV1_3188 f6b02fddb750ab5da892fa98ceb63dde 458 Gene3D G3DSA:3.40.50.300 1 173 2.9E-13 T 14-10-2018 VV2_0862 dce058645f37d4c4dd22cd520debd8b2 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 3.1E-145 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VV2_1062 71914a2686a9fb436ac61738c8459aee 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 387 1.7E-120 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VV2_1062 71914a2686a9fb436ac61738c8459aee 388 SUPERFAMILY SSF53383 2 387 2.34E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_1062 71914a2686a9fb436ac61738c8459aee 388 Gene3D G3DSA:3.40.640.10 69 292 1.7E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV2_1062 71914a2686a9fb436ac61738c8459aee 388 Gene3D G3DSA:3.90.1150.10 12 383 1.7E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VV2_1062 71914a2686a9fb436ac61738c8459aee 388 Pfam PF00155 Aminotransferase class I and II 36 383 8.6E-38 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV2_0640 02567e7c8f54074cfdd604cf912f6dff 226 Pfam PF12477 Sex factor F TraW protein N terminal 14 37 2.0E-5 T 14-10-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain VV2_0640 02567e7c8f54074cfdd604cf912f6dff 226 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 6 216 3.0E-85 T 14-10-2018 IPR014114 Type-F conjugative transfer system protein TraW VV2_1309 19e93660486a7f59a56e6ea1afac7088 332 Pfam PF11168 Protein of unknown function (DUF2955) 9 148 1.1E-35 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 VV1_0811 7edc2a932178247a356fb9dfadcad308 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 278 3.2E-45 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VV1_0811 7edc2a932178247a356fb9dfadcad308 396 SUPERFAMILY SSF51735 34 278 7.3E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0811 7edc2a932178247a356fb9dfadcad308 396 Gene3D G3DSA:3.90.25.40 201 311 2.0E-160 T 14-10-2018 VV1_0811 7edc2a932178247a356fb9dfadcad308 396 Gene3D G3DSA:3.40.50.720 9 370 2.0E-160 T 14-10-2018 VV2_1453 8ef0ca86ccff5991b9ee58bbe93f4cca 399 SUPERFAMILY SSF103473 5 385 5.75E-42 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_1453 8ef0ca86ccff5991b9ee58bbe93f4cca 399 Pfam PF07690 Major Facilitator Superfamily 11 298 9.1E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_1453 8ef0ca86ccff5991b9ee58bbe93f4cca 399 Gene3D G3DSA:1.20.1250.20 1 190 2.3E-13 T 14-10-2018 VV2_1453 8ef0ca86ccff5991b9ee58bbe93f4cca 399 Gene3D G3DSA:1.20.1250.20 208 397 6.6E-19 T 14-10-2018 VV2_1039 8af52a4edfc9008078d6d6f908ccce10 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 1.5E-36 T 14-10-2018 IPR021724 Protein of unknown function DUF3297 VV2_0075 0f795f64f364e515b571cb3da2bae8f0 136 Gene3D G3DSA:3.30.565.10 7 134 7.6E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0075 0f795f64f364e515b571cb3da2bae8f0 136 SUPERFAMILY SSF55874 28 131 3.01E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0075 0f795f64f364e515b571cb3da2bae8f0 136 Pfam PF13581 Histidine kinase-like ATPase domain 18 131 9.5E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV1_2046 5513abfdceb5cfa2ccaa319a1ac0952b 79 Gene3D G3DSA:1.10.260.40 1 79 5.0E-10 T 14-10-2018 VV1_2046 5513abfdceb5cfa2ccaa319a1ac0952b 79 Pfam PF01381 Helix-turn-helix 13 59 6.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VV1_2046 5513abfdceb5cfa2ccaa319a1ac0952b 79 SUPERFAMILY SSF47413 4 68 5.91E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VV1_2182 f36835a9011d43ffd00833658a1356c3 189 TIGRFAM TIGR03238 dnd_assoc_3: DNA phosphorothioation-dependent restriction protein DptF 31 188 1.9E-51 T 14-10-2018 IPR017647 DNA phosphorothioation-dependent restriction protein DptF VV1_1169 f7a4275d79f292f33ba34f60935c71e7 278 ProSitePatterns PS01081 TetR-type HTH domain signature. 96 126 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VV1_1169 f7a4275d79f292f33ba34f60935c71e7 278 Gene3D G3DSA:1.10.10.60 69 120 4.3E-23 T 14-10-2018 VV1_1169 f7a4275d79f292f33ba34f60935c71e7 278 SUPERFAMILY SSF46689 70 145 3.69E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VV1_1169 f7a4275d79f292f33ba34f60935c71e7 278 Gene3D G3DSA:1.10.357.10 121 275 4.4E-35 T 14-10-2018 VV1_1169 f7a4275d79f292f33ba34f60935c71e7 278 Pfam PF00440 Bacterial regulatory proteins, tetR family 84 126 2.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VV2_0762 d4edf4c0160dce6244e56e93a8ef7e0c 152 Gene3D G3DSA:3.40.190.10 31 151 4.9E-6 T 14-10-2018 VV2_0762 d4edf4c0160dce6244e56e93a8ef7e0c 152 SUPERFAMILY SSF53850 31 141 2.21E-6 T 14-10-2018 VV1_2418 c37d8213c87326bb52608a2491448662 153 Pfam PF13673 Acetyltransferase (GNAT) domain 41 126 3.1E-11 T 14-10-2018 IPR000182 GNAT domain VV1_2418 c37d8213c87326bb52608a2491448662 153 SUPERFAMILY SSF55729 20 127 1.86E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2418 c37d8213c87326bb52608a2491448662 153 Gene3D G3DSA:3.40.630.30 8 131 2.3E-19 T 14-10-2018 VV1_0499 796e8256175e2d0b98b0d7776d212e16 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 3.3E-23 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VV1_0420 7da303fda1e91dd3faf8d81bee3d3f5f 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.3E-100 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VV1_0420 7da303fda1e91dd3faf8d81bee3d3f5f 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 357 2.6E-134 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VV1_0420 7da303fda1e91dd3faf8d81bee3d3f5f 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 7.5E-30 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VV1_0420 7da303fda1e91dd3faf8d81bee3d3f5f 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.618 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VV2_1647 8164c69c7edab7b439cce7869c149b68 206 Gene3D G3DSA:2.170.170.11 29 149 1.2E-30 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VV2_1647 8164c69c7edab7b439cce7869c149b68 206 SUPERFAMILY SSF51645 36 202 1.11E-23 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VV1_1911 dff68624f7f879c1c86a5103a4c048e6 180 Pfam PF13740 ACT domain 3 78 2.4E-24 T 14-10-2018 VV1_1911 dff68624f7f879c1c86a5103a4c048e6 180 SUPERFAMILY SSF55021 88 176 3.02E-20 T 14-10-2018 VV1_1911 dff68624f7f879c1c86a5103a4c048e6 180 SUPERFAMILY SSF55021 1 82 8.33E-17 T 14-10-2018 VV1_1911 dff68624f7f879c1c86a5103a4c048e6 180 PIRSF PIRSF028103 1 178 7.1E-63 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VV1_1911 dff68624f7f879c1c86a5103a4c048e6 180 Gene3D G3DSA:3.30.70.260 87 180 3.8E-37 T 14-10-2018 VV1_1911 dff68624f7f879c1c86a5103a4c048e6 180 Gene3D G3DSA:3.30.70.260 1 85 1.3E-24 T 14-10-2018 VV2_0573 d095f7adf1a550997df405c35d987796 237 Pfam PF03591 AzlC protein 25 163 1.9E-34 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease VV2_0326 b6212fed5e41de9af89ce34021db2907 304 SUPERFAMILY SSF103481 174 273 3.27E-5 T 14-10-2018 VV2_0326 b6212fed5e41de9af89ce34021db2907 304 Pfam PF00892 EamA-like transporter family 3 119 7.0E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0326 b6212fed5e41de9af89ce34021db2907 304 Pfam PF00892 EamA-like transporter family 139 275 2.0E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_0512 6be92d5bb3d343b3f23ae9c288c8d81a 499 Pfam PF07730 Histidine kinase 304 367 3.3E-11 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VV2_0512 6be92d5bb3d343b3f23ae9c288c8d81a 499 SMART SM00387 407 499 3.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0512 6be92d5bb3d343b3f23ae9c288c8d81a 499 SUPERFAMILY SSF55874 372 497 2.23E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV2_0512 6be92d5bb3d343b3f23ae9c288c8d81a 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 468 1.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VV2_0512 6be92d5bb3d343b3f23ae9c288c8d81a 499 Pfam PF05231 MASE1 15 276 7.9E-20 T 14-10-2018 IPR007895 MASE1 VV2_0512 6be92d5bb3d343b3f23ae9c288c8d81a 499 Gene3D G3DSA:3.30.565.10 371 498 1.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VV1_1637 9a9c2d5f8fa033aa137de81119d44a55 222 SMART SM00947 30 192 6.3E-63 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV1_1637 9a9c2d5f8fa033aa137de81119d44a55 222 Gene3D G3DSA:3.40.1050.10 1 221 5.6E-85 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VV1_1637 9a9c2d5f8fa033aa137de81119d44a55 222 SUPERFAMILY SSF53056 2 212 4.71E-73 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VV1_1637 9a9c2d5f8fa033aa137de81119d44a55 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV1_1637 9a9c2d5f8fa033aa137de81119d44a55 222 Pfam PF00484 Carbonic anhydrase 38 187 2.9E-48 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV1_1637 9a9c2d5f8fa033aa137de81119d44a55 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VV1_1887 463e0721eaced24f9d09cce399e87232 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 243 6.3E-98 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1887 463e0721eaced24f9d09cce399e87232 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 226 3.6E-80 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VV1_1887 463e0721eaced24f9d09cce399e87232 243 Pfam PF00929 Exonuclease 13 180 5.3E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_1887 463e0721eaced24f9d09cce399e87232 243 SUPERFAMILY SSF53098 10 190 2.05E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_1887 463e0721eaced24f9d09cce399e87232 243 SMART SM00479 11 189 6.1E-52 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_1887 463e0721eaced24f9d09cce399e87232 243 Gene3D G3DSA:3.30.420.10 4 195 1.8E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV2_0667 b218463100ee5dd7563a89922efb9501 79 SUPERFAMILY SSF56349 1 75 1.47E-14 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VV2_0667 b218463100ee5dd7563a89922efb9501 79 Pfam PF00589 Phage integrase family 2 64 1.6E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VV2_0667 b218463100ee5dd7563a89922efb9501 79 Gene3D G3DSA:1.10.443.10 1 73 3.7E-10 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VV1_0071 b6e80d561530aaadcdbfdc2d22418e73 187 Pfam PF16473 3' exoribonuclease, RNase T-like 3 177 3.3E-51 T 14-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain VV1_0071 b6e80d561530aaadcdbfdc2d22418e73 187 Gene3D G3DSA:3.30.420.10 2 186 2.1E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_0071 b6e80d561530aaadcdbfdc2d22418e73 187 SUPERFAMILY SSF53098 3 181 1.97E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_0165 908c34104453e49509db2a7abcd16369 542 SMART SM00990 425 536 1.8E-26 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VV2_0165 908c34104453e49509db2a7abcd16369 542 Pfam PF08774 VRR-NUC domain 433 535 5.4E-23 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VV2_0165 908c34104453e49509db2a7abcd16369 542 Gene3D G3DSA:3.40.1350.10 466 541 1.4E-9 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VV1_2742 1914d6019a48a076d2e298d81c2d612f 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 143 1.9E-7 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 VV1_2742 1914d6019a48a076d2e298d81c2d612f 219 SUPERFAMILY SSF49354 34 142 3.49E-11 T 14-10-2018 IPR008962 PapD-like superfamily VV1_2445 76c05c16edc20b0722793f398eddaaa8 173 SUPERFAMILY SSF55729 9 132 8.64E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2445 76c05c16edc20b0722793f398eddaaa8 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 125 5.8E-10 T 14-10-2018 VV1_2445 76c05c16edc20b0722793f398eddaaa8 173 Gene3D G3DSA:3.40.630.30 1 161 4.3E-22 T 14-10-2018 VV2_0076 a37ef5ff5adf47f0fdca44ebfe39658c 194 Gene3D G3DSA:3.60.40.10 3 190 1.9E-28 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_0076 a37ef5ff5adf47f0fdca44ebfe39658c 194 SUPERFAMILY SSF81606 13 190 4.18E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV2_0076 a37ef5ff5adf47f0fdca44ebfe39658c 194 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 29 190 2.2E-7 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VV1_0817 8aff632622b7fe308c8f86c91ec6767a 263 SUPERFAMILY SSF53448 6 147 7.29E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0817 8aff632622b7fe308c8f86c91ec6767a 263 Gene3D G3DSA:3.90.550.10 1 214 2.2E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0817 8aff632622b7fe308c8f86c91ec6767a 263 Pfam PF00535 Glycosyl transferase family 2 12 115 1.8E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VV2_0819 36b3aad8508b7a3810a49264d20c5e9c 186 Gene3D G3DSA:2.30.110.10 3 127 1.3E-18 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VV2_0819 36b3aad8508b7a3810a49264d20c5e9c 186 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 98 3.6E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VV2_0819 36b3aad8508b7a3810a49264d20c5e9c 186 SUPERFAMILY SSF50475 8 113 6.28E-11 T 14-10-2018 VV1_2707 a28b515c0e4aed5d8f9fc4347aae626d 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 14-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 VV1_2707 a28b515c0e4aed5d8f9fc4347aae626d 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.1E-38 T 14-10-2018 IPR006214 Bax inhibitor 1-related VV2_0606 4af06e1c96902d88818b41a2afaa617e 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 4.2E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV2_0606 4af06e1c96902d88818b41a2afaa617e 139 SUPERFAMILY SSF54593 10 135 6.46E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV2_0606 4af06e1c96902d88818b41a2afaa617e 139 Gene3D G3DSA:3.10.180.10 6 138 7.5E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2523 9970518b297b0749d68fc87185c655d3 154 SUPERFAMILY SSF55729 1 147 1.58E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_2523 9970518b297b0749d68fc87185c655d3 154 Pfam PF00583 Acetyltransferase (GNAT) family 46 126 8.6E-6 T 14-10-2018 IPR000182 GNAT domain VV1_2523 9970518b297b0749d68fc87185c655d3 154 Gene3D G3DSA:3.40.630.30 1 140 6.9E-13 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 SUPERFAMILY SSF118215 29 417 1.57E-109 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 Pfam PF00375 Sodium:dicarboxylate symporter family 29 417 1.7E-118 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 Gene3D G3DSA:1.10.3860.10 14 434 6.2E-117 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 244 263 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 62 82 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 161 183 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 21 41 1.5E-52 T 14-10-2018 VV1_3070 8d2b4281776c4afa09dee98f22334475 434 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 1.5E-52 T 14-10-2018 VV1_2016 193cd65a66ec94c1e30aef6c199c88fb 131 Gene3D G3DSA:3.10.180.10 1 129 9.9E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_2016 193cd65a66ec94c1e30aef6c199c88fb 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 6.0E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VV1_2016 193cd65a66ec94c1e30aef6c199c88fb 131 SUPERFAMILY SSF54593 2 127 2.42E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VV1_0640 1d38f2b9e65832658a81e9686e97be4b 176 Pfam PF05068 Mannitol repressor 7 170 5.2E-61 T 14-10-2018 IPR007761 Mannitol repressor MtlR-like VV1_0640 1d38f2b9e65832658a81e9686e97be4b 176 Gene3D G3DSA:1.20.120.330 1 172 5.7E-68 T 14-10-2018 VV1_0640 1d38f2b9e65832658a81e9686e97be4b 176 SUPERFAMILY SSF158668 4 170 7.59E-57 T 14-10-2018 IPR038026 MtlR-like superfamily VV2_0692 42436bdc95b8f05f38ff99b5212d1026 264 SUPERFAMILY SSF52467 12 210 4.67E-15 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VV2_0692 42436bdc95b8f05f38ff99b5212d1026 264 PIRSF PIRSF033541 1 264 4.2E-143 T 14-10-2018 IPR014583 Uncharacterised protein family, Sir2-like VV2_0692 42436bdc95b8f05f38ff99b5212d1026 264 Pfam PF13289 SIR2-like domain 103 245 5.1E-25 T 14-10-2018 IPR039444 SIR2-like domain VV2_1612 191f7c31c309ea4625f7c4902a800e72 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 1.3E-22 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VV1_3084 7732bd6a42566815ffef15124fb5244f 151 Pfam PF02391 MoaE protein 8 119 2.8E-38 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VV1_3084 7732bd6a42566815ffef15124fb5244f 151 SUPERFAMILY SSF54690 4 149 1.83E-57 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VV1_3084 7732bd6a42566815ffef15124fb5244f 151 Gene3D G3DSA:3.90.1170.40 1 149 3.3E-56 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VV2_1558 ab484550318bdbfd82c11973547f9b4b 287 Gene3D G3DSA:1.10.3720.10 61 285 1.6E-35 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1558 ab484550318bdbfd82c11973547f9b4b 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 4.9E-99 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VV2_1558 ab484550318bdbfd82c11973547f9b4b 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.4E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV2_1558 ab484550318bdbfd82c11973547f9b4b 287 SUPERFAMILY SSF161098 24 274 4.02E-42 T 14-10-2018 IPR035906 MetI-like superfamily VV1_2780 4d5250b4ddf3883cb6f1504729ffc75e 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 1.4E-9 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VV1_0324 82fdb9decefdc068899ef91bb0dc7b8a 149 Pfam PF03477 ATP cone domain 50 136 8.0E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VV1_0324 82fdb9decefdc068899ef91bb0dc7b8a 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.939 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VV1_0324 82fdb9decefdc068899ef91bb0dc7b8a 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.8E-73 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VV2_0251 9eaedda8abaffbbd57bf8d2a8387ea93 267 Gene3D G3DSA:3.30.2010.10 55 143 2.2E-7 T 14-10-2018 VV2_0251 9eaedda8abaffbbd57bf8d2a8387ea93 267 Pfam PF01435 Peptidase family M48 66 250 1.5E-46 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV1_0721 fa662d20229f6e236076c4df3988ccea 165 Pfam PF11736 Protein of unknown function (DUF3299) 31 161 7.0E-44 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 VV1_0721 fa662d20229f6e236076c4df3988ccea 165 Gene3D G3DSA:2.40.50.870 24 165 2.9E-46 T 14-10-2018 VV2_1241 8f0cce8704f5d2d4b7dfdf7ebbdda6af 199 SUPERFAMILY SSF52833 42 196 8.54E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1241 8f0cce8704f5d2d4b7dfdf7ebbdda6af 199 Gene3D G3DSA:3.40.30.10 25 197 9.6E-38 T 14-10-2018 VV2_1241 8f0cce8704f5d2d4b7dfdf7ebbdda6af 199 Pfam PF02630 SCO1/SenC 19 177 1.9E-33 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_3103 e7877579b0f4695be132025da80a333a 217 SMART SM00479 18 204 1.7E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_3103 e7877579b0f4695be132025da80a333a 217 Hamap MF_00157 Ribonuclease T [rnt]. 1 217 115.058 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VV1_3103 e7877579b0f4695be132025da80a333a 217 Gene3D G3DSA:3.30.420.10 9 216 2.6E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VV1_3103 e7877579b0f4695be132025da80a333a 217 SUPERFAMILY SSF53098 10 208 1.69E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_3103 e7877579b0f4695be132025da80a333a 217 Pfam PF00929 Exonuclease 20 195 5.9E-45 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VV1_3103 e7877579b0f4695be132025da80a333a 217 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.6E-99 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VV2_1243 bd6910936092c1303a532169391be3b5 322 Pfam PF04018 Domain of unknown function (DUF368) 29 273 5.3E-97 T 14-10-2018 IPR007163 Protein of unknown function DUF368 VV1_1822 6362a779be0f188faa355360b81c4816 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 1.5E-108 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VV1_1822 6362a779be0f188faa355360b81c4816 414 PIRSF PIRSF016055 1 414 9.4E-201 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VV1_1822 6362a779be0f188faa355360b81c4816 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.469 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VV1_1822 6362a779be0f188faa355360b81c4816 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 9.0E-205 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VV1_1684 91599a36faeba755878ea1c9384f5160 138 PIRSF PIRSF016789 13 135 1.1E-31 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VV1_1684 91599a36faeba755878ea1c9384f5160 138 Pfam PF04304 Protein of unknown function (DUF454) 17 129 5.9E-33 T 14-10-2018 IPR007401 Protein of unknown function DUF454 VV1_0992 f70573d0008fc6afea4842ef8554bfd3 418 Gene3D G3DSA:3.40.640.10 1 416 2.9E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VV1_0992 f70573d0008fc6afea4842ef8554bfd3 418 Pfam PF00155 Aminotransferase class I and II 67 399 1.4E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VV1_0992 f70573d0008fc6afea4842ef8554bfd3 418 SUPERFAMILY SSF53383 13 410 5.78E-61 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VV2_0107 673ee17cbefef4ff0d2cd11dea96f404 99 Gene3D G3DSA:1.10.287.1080 2 97 4.1E-9 T 14-10-2018 VV2_0107 673ee17cbefef4ff0d2cd11dea96f404 99 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 3 69 6.7E-16 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VV2_0107 673ee17cbefef4ff0d2cd11dea96f404 99 SUPERFAMILY SSF101386 3 78 9.45E-10 T 14-10-2018 VV2_0499 b17572fcd604dc7a675c94fe6409b8f4 305 SUPERFAMILY SSF51569 8 297 1.16E-68 T 14-10-2018 VV2_0499 b17572fcd604dc7a675c94fe6409b8f4 305 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 240 249 - T 14-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 VV2_0499 b17572fcd604dc7a675c94fe6409b8f4 305 Pfam PF00682 HMGL-like 15 283 2.0E-50 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VV2_0499 b17572fcd604dc7a675c94fe6409b8f4 305 Gene3D G3DSA:3.20.20.70 7 304 7.6E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_3046 41fe9935ebc77e5aa91acf01aadbbb43 302 Pfam PF13084 Domain of unknown function (DUF3943) 139 248 1.8E-37 T 14-10-2018 IPR025079 Domain of unknown function DUF3943 VV1_2720 6cd910743085ea295ed298f51c9ed35a 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.2E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VV1_2720 6cd910743085ea295ed298f51c9ed35a 231 SUPERFAMILY SSF52402 1 211 3.09E-66 T 14-10-2018 VV1_2720 6cd910743085ea295ed298f51c9ed35a 231 PIRSF PIRSF006293 1 223 2.2E-82 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VV1_2720 6cd910743085ea295ed298f51c9ed35a 231 Gene3D G3DSA:3.40.50.620 1 230 4.8E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_2720 6cd910743085ea295ed298f51c9ed35a 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.3E-82 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VV1_2720 6cd910743085ea295ed298f51c9ed35a 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.04 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VV2_0811 c8d0b58610776bd11a53e8119ab4a7ed 682 Pfam PF00563 EAL domain 440 663 1.9E-56 T 14-10-2018 IPR001633 EAL domain VV2_0811 c8d0b58610776bd11a53e8119ab4a7ed 682 SUPERFAMILY SSF141868 439 675 6.93E-67 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0811 c8d0b58610776bd11a53e8119ab4a7ed 682 Pfam PF02378 Phosphotransferase system, EIIC 117 322 4.5E-17 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VV2_0811 c8d0b58610776bd11a53e8119ab4a7ed 682 Gene3D G3DSA:3.20.20.450 429 679 3.9E-68 T 14-10-2018 IPR035919 EAL domain superfamily VV2_0811 c8d0b58610776bd11a53e8119ab4a7ed 682 SMART SM00052 426 668 1.1E-60 T 14-10-2018 IPR001633 EAL domain VV1_0747 3f16209064057c8aae87abe0bb031afc 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.0E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VV1_0747 3f16209064057c8aae87abe0bb031afc 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.871 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VV1_0747 3f16209064057c8aae87abe0bb031afc 101 Gene3D G3DSA:4.10.830.10 41 101 8.4E-23 T 14-10-2018 VV1_0747 3f16209064057c8aae87abe0bb031afc 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VV1_0747 3f16209064057c8aae87abe0bb031afc 101 SUPERFAMILY SSF57716 2 101 5.99E-37 T 14-10-2018 VV1_1941 e85f880b046b9a7ebf1428064f2e314c 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 4.2E-21 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VV2_0421 48ba1f5160bde28ebe1dabf287002ac0 75 Pfam PF13737 Transposase DDE domain 19 66 1.2E-16 T 14-10-2018 IPR025668 Transposase DDE domain VV1_0887 83b67a3efcfb6bd1e89ec14b3a060bce 173 Pfam PF13521 AAA domain 4 164 9.5E-41 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain VV1_0887 83b67a3efcfb6bd1e89ec14b3a060bce 173 Gene3D G3DSA:3.40.50.300 3 168 1.5E-9 T 14-10-2018 VV1_0887 83b67a3efcfb6bd1e89ec14b3a060bce 173 SUPERFAMILY SSF52540 4 172 4.92E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1552 7ea28f03da890bd5d29d0b387e2532a9 186 Pfam PF07603 Protein of unknown function (DUF1566) 42 183 1.2E-21 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 VV1_2405 7c5923fdea0b5aac1c72abcb8f307472 212 Gene3D G3DSA:3.40.50.880 2 212 8.5E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_2405 7c5923fdea0b5aac1c72abcb8f307472 212 SUPERFAMILY SSF52317 1 178 8.84E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like VV1_2405 7c5923fdea0b5aac1c72abcb8f307472 212 Pfam PF01965 DJ-1/PfpI family 3 157 4.4E-18 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VV1_0109 5635f7ea90d864d27f5ffc28faf54ad1 191 Pfam PF13274 Protein of unknown function (DUF4065) 27 119 5.8E-21 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 VV2_1156 4bbdb43fc868cced2879df112daae746 364 Pfam PF10987 Protein of unknown function (DUF2806) 105 323 5.8E-37 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 VV2_0491 cb136a964a42137aa30bc19f282aa223 265 SUPERFAMILY SSF52096 8 264 7.01E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV2_0491 cb136a964a42137aa30bc19f282aa223 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VV2_0491 cb136a964a42137aa30bc19f282aa223 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 265 3.2E-58 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VV2_0491 cb136a964a42137aa30bc19f282aa223 265 Gene3D G3DSA:3.90.226.10 9 265 7.3E-79 T 14-10-2018 VV2_0250 17c6ba1a9c57e6079b7c9e5843ccbc9b 360 Pfam PF02163 Peptidase family M50 227 260 5.1E-7 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VV2_1157 ec2147768b58df0c29c4f3afc8db092f 557 Pfam PF03961 Flagellar Assembly Protein A 80 544 7.6E-125 T 14-10-2018 IPR005646 Flagellar assembly protein A VV1_0429 70fa81fded61e8e7eb98eadae26130c5 374 Pfam PF04055 Radical SAM superfamily 109 280 7.9E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VV1_0429 70fa81fded61e8e7eb98eadae26130c5 374 PIRSF PIRSF006004 3 366 3.5E-144 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VV1_0429 70fa81fded61e8e7eb98eadae26130c5 374 SUPERFAMILY SSF102114 105 332 1.7E-12 T 14-10-2018 VV1_0429 70fa81fded61e8e7eb98eadae26130c5 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 4.8E-161 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VV1_0429 70fa81fded61e8e7eb98eadae26130c5 374 Gene3D G3DSA:1.10.150.530 1 67 2.1E-26 T 14-10-2018 VV1_0429 70fa81fded61e8e7eb98eadae26130c5 374 Gene3D G3DSA:3.20.20.70 68 338 7.0E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VV1_0429 70fa81fded61e8e7eb98eadae26130c5 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 72.315 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VV2_0960 49e91d3160339619bbf537e1afb06239 215 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 210 7.1E-53 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VV2_0960 49e91d3160339619bbf537e1afb06239 215 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 215 29.283 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 VV2_0274 cd118c6716911795ac93b92df781a70b 195 Pfam PF13689 Domain of unknown function (DUF4154) 53 185 8.9E-25 T 14-10-2018 IPR025293 YfiR-like VV2_1150 3cd574e1ba4ebb706ed8a3651b36440c 159 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 6.7E-22 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 VV2_1150 3cd574e1ba4ebb706ed8a3651b36440c 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 2.1E-21 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 VV1_3104 af7735afaf647f503498763606a2b401 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 2.6E-6 T 14-10-2018 VV1_3104 af7735afaf647f503498763606a2b401 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.6E-6 T 14-10-2018 VV1_3104 af7735afaf647f503498763606a2b401 441 Pfam PF03553 Na+/H+ antiporter family 150 435 9.0E-77 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VV1_3104 af7735afaf647f503498763606a2b401 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.3E-35 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VV1_2163 3c4da2650474ef0e07dbba3b1c46168e 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.8E-105 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VV1_2163 3c4da2650474ef0e07dbba3b1c46168e 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 5.7E-168 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VV1_2163 3c4da2650474ef0e07dbba3b1c46168e 378 PIRSF PIRSF000267 2 376 2.9E-122 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VV1_2232 22b2bbcef89b6517ccf91c438ad7162f 529 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 516 2.3E-300 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VV1_2232 22b2bbcef89b6517ccf91c438ad7162f 529 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 529 382.061 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VV1_2232 22b2bbcef89b6517ccf91c438ad7162f 529 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VV2_0185 ce90be400e5cc722aed93117fcf6d9b7 110 Gene3D G3DSA:3.40.50.300 5 108 3.7E-9 T 14-10-2018 VV2_0185 ce90be400e5cc722aed93117fcf6d9b7 110 SUPERFAMILY SSF52540 9 102 8.06E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1231 d81862dfbb161bc18d956aa485fab1b4 606 SMART SM00642 20 491 1.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_1231 d81862dfbb161bc18d956aa485fab1b4 606 SUPERFAMILY SSF51445 13 497 4.99E-86 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily VV2_1231 d81862dfbb161bc18d956aa485fab1b4 606 Gene3D G3DSA:3.20.20.80 241 461 1.5E-41 T 14-10-2018 VV2_1231 d81862dfbb161bc18d956aa485fab1b4 606 Gene3D G3DSA:3.20.20.80 3 161 1.1E-22 T 14-10-2018 VV2_1231 d81862dfbb161bc18d956aa485fab1b4 606 Pfam PF00128 Alpha amylase, catalytic domain 58 437 4.0E-22 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VV2_0101 b0b3aa4353ea4f4698e43956eeb62a56 265 Gene3D G3DSA:3.40.50.1820 9 239 2.5E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0101 b0b3aa4353ea4f4698e43956eeb62a56 265 SUPERFAMILY SSF53474 12 249 2.85E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_0101 b0b3aa4353ea4f4698e43956eeb62a56 265 Pfam PF01764 Lipase (class 3) 63 207 3.8E-27 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VV1_1454 fb4c5a066dca42425b6de8686c5e466d 1295 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 8 1282 0.0 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 VV1_1454 fb4c5a066dca42425b6de8686c5e466d 1295 Pfam PF13502 AsmA-like C-terminal region 1032 1271 5.8E-56 T 14-10-2018 IPR032712 AsmA-like, C-terminal VV1_1454 fb4c5a066dca42425b6de8686c5e466d 1295 Pfam PF13116 Protein of unknown function 508 794 1.5E-92 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 VV2_1048 039811b9da7eca079ffad496bf6e3926 231 PIRSF PIRSF028137 1 231 1.1E-109 T 14-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 Gene3D G3DSA:3.30.870.10 73 266 6.1E-36 T 14-10-2018 VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 SUPERFAMILY SSF56024 36 261 3.14E-40 T 14-10-2018 VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 Pfam PF13091 PLD-like domain 330 464 6.3E-22 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 Pfam PF13091 PLD-like domain 96 243 1.5E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 SUPERFAMILY SSF56024 300 467 1.65E-34 T 14-10-2018 VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 SMART SM00155 184 211 0.3 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 SMART SM00155 418 445 0.025 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VV1_3126 e9d69d20fa51da854c9e578887a766c4 524 Gene3D G3DSA:3.30.870.10 306 486 1.8E-37 T 14-10-2018 VV2_0754 aee475b3e874ad1a0ea54abe77463714 367 Pfam PF13729 F plasmid transfer operon, TraF, protein 24 284 4.3E-75 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VV2_1635 cb5a68e8fd9f2fffe47b51063c4cb697 299 Pfam PF01564 Spermine/spermidine synthase domain 83 215 9.9E-7 T 14-10-2018 VV2_1635 cb5a68e8fd9f2fffe47b51063c4cb697 299 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 7 293 18.619 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 VV2_1635 cb5a68e8fd9f2fffe47b51063c4cb697 299 SUPERFAMILY SSF53335 18 256 1.07E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV2_1635 cb5a68e8fd9f2fffe47b51063c4cb697 299 Gene3D G3DSA:3.40.50.150 42 291 2.0E-53 T 14-10-2018 VV2_0983 1b63860000d16ae7bb017d1e614bd5af 400 Gene3D G3DSA:3.30.9.10 86 356 7.5E-78 T 14-10-2018 VV2_0983 1b63860000d16ae7bb017d1e614bd5af 400 SUPERFAMILY SSF51905 2 302 1.12E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_0983 1b63860000d16ae7bb017d1e614bd5af 400 Pfam PF01266 FAD dependent oxidoreductase 3 393 7.3E-66 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VV2_0983 1b63860000d16ae7bb017d1e614bd5af 400 Gene3D G3DSA:3.50.50.60 3 390 7.5E-78 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_1847 abcf746485c01e8a6b7f1c59bc8863b6 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.276 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VV1_1847 abcf746485c01e8a6b7f1c59bc8863b6 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 3.5E-48 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 VV2_0161 9d9504ee7c4da72aace3f468d483f614 566 Gene3D G3DSA:3.30.1360.150 374 496 3.6E-181 T 14-10-2018 VV2_0161 9d9504ee7c4da72aace3f468d483f614 566 Gene3D G3DSA:3.40.720.10 26 556 3.6E-181 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VV2_0161 9d9504ee7c4da72aace3f468d483f614 566 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 30 505 7.5E-82 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VV2_0161 9d9504ee7c4da72aace3f468d483f614 566 PIRSF PIRSF031924 1 566 8.0E-224 T 14-10-2018 IPR026263 Alkaline phosphatase, prokaryotic GO:0004035 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VV2_0161 9d9504ee7c4da72aace3f468d483f614 566 SUPERFAMILY SSF53649 15 545 1.71E-62 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VV2_1269 103fb26e2f28aca00301925279b285e3 602 Pfam PF02690 Na+/Pi-cotransporter 203 290 2.1E-16 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VV2_1269 103fb26e2f28aca00301925279b285e3 602 Pfam PF02690 Na+/Pi-cotransporter 50 185 2.2E-50 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VV2_1269 103fb26e2f28aca00301925279b285e3 602 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 42 355 4.9E-71 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 VV2_1269 103fb26e2f28aca00301925279b285e3 602 SUPERFAMILY SSF109755 372 587 2.09E-13 T 14-10-2018 VV1_2887 1cc110fef979200b5b6b26caefecb4fb 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 6.7E-35 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VV1_0095 6e70c39e99fb37f764f433f8344aaa07 286 PIRSF PIRSF020481 1 286 3.2E-96 T 14-10-2018 IPR014507 Baseplate assembly protein J, predicted VV1_0095 6e70c39e99fb37f764f433f8344aaa07 286 Pfam PF04865 Baseplate J-like protein 93 238 1.1E-19 T 14-10-2018 IPR006949 Baseplate protein J-like VV1_2020 454a29393f12755c43914ee674c4337a 308 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 49 248 1.8E-58 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VV1_2020 454a29393f12755c43914ee674c4337a 308 Gene3D G3DSA:1.10.8.760 148 212 2.4E-26 T 14-10-2018 VV1_2020 454a29393f12755c43914ee674c4337a 308 Gene3D G3DSA:3.40.50.11550 40 261 2.4E-26 T 14-10-2018 VV1_2020 454a29393f12755c43914ee674c4337a 308 SUPERFAMILY SSF159501 28 277 3.92E-72 T 14-10-2018 VV1_2020 454a29393f12755c43914ee674c4337a 308 PIRSF PIRSF020419 1 292 1.8E-74 T 14-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted VV1_1937 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 2.1E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VV1_1937 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.1E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VV1_1937 aa4b5ec6397351feba78795c5a1a7352 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 2.1E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VV1_1937 aa4b5ec6397351feba78795c5a1a7352 266 Pfam PF02108 Flagellar assembly protein FliH 125 252 1.6E-33 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VV1_0653 42e3aa73f30066e7b014fe28499f0dd0 255 Gene3D G3DSA:2.30.30.40 125 183 1.1E-9 T 14-10-2018 VV1_0653 42e3aa73f30066e7b014fe28499f0dd0 255 Pfam PF08239 Bacterial SH3 domain 130 182 8.8E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type VV1_1748 bc5217450121b0082a9e42ec11046e08 248 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 4.3E-29 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VV1_1748 bc5217450121b0082a9e42ec11046e08 248 Pfam PF08666 SAF domain 45 105 1.0E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VV1_1748 bc5217450121b0082a9e42ec11046e08 248 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 225 4.1E-74 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB VV1_1748 bc5217450121b0082a9e42ec11046e08 248 SMART SM00858 44 106 3.6E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VV2_1255 d06f5b46c00b73c0add94996080973ae 195 Pfam PF01810 LysE type translocator 17 188 2.1E-13 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV2_1027 c3212478c3d09f55c95175a50c9f2abe 304 Pfam PF00892 EamA-like transporter family 19 149 8.9E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1027 c3212478c3d09f55c95175a50c9f2abe 304 Pfam PF00892 EamA-like transporter family 164 292 6.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VV2_1027 c3212478c3d09f55c95175a50c9f2abe 304 SUPERFAMILY SSF103481 73 152 5.62E-5 T 14-10-2018 VV2_1027 c3212478c3d09f55c95175a50c9f2abe 304 SUPERFAMILY SSF103481 202 297 1.83E-9 T 14-10-2018 VV1_2225 82515dc938dceab1b4239ec505a4495d 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 270 8.8E-26 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VV1_2675 d61852d8cc86328f029696fe10437e18 213 Pfam PF02397 Bacterial sugar transferase 15 208 1.2E-62 T 14-10-2018 IPR003362 Bacterial sugar transferase VV1_2592 ce077188c34008d0bce694333fa2db02 352 Pfam PF01292 Prokaryotic cytochrome b561 125 306 1.3E-25 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VV1_2592 ce077188c34008d0bce694333fa2db02 352 SUPERFAMILY SSF81342 119 331 1.02E-45 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VV1_2592 ce077188c34008d0bce694333fa2db02 352 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 1.3E-82 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VV1_2592 ce077188c34008d0bce694333fa2db02 352 Gene3D G3DSA:1.20.950.20 118 336 8.2E-65 T 14-10-2018 VV2_1659 e6d8aaab75eb559ef5ce5c9cc241e8c7 241 Gene3D G3DSA:3.30.930.10 6 241 2.6E-45 T 14-10-2018 VV2_1659 e6d8aaab75eb559ef5ce5c9cc241e8c7 241 SUPERFAMILY SSF55681 7 238 1.66E-48 T 14-10-2018 VV1_2317 8086fd3c43a232ef69369282b6ad3215 234 Gene3D G3DSA:1.10.340.30 36 160 8.2E-19 T 14-10-2018 VV1_2317 8086fd3c43a232ef69369282b6ad3215 234 Pfam PF03352 Methyladenine glycosylase 43 135 1.2E-15 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VV1_2317 8086fd3c43a232ef69369282b6ad3215 234 SUPERFAMILY SSF48150 39 184 2.2E-38 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VV1_3148 e201cb3769edc421df84895413535fc8 100 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 4 81 8.4E-14 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VV1_3148 e201cb3769edc421df84895413535fc8 100 SUPERFAMILY SSF46767 2 84 1.83E-26 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VV1_3148 e201cb3769edc421df84895413535fc8 100 Gene3D G3DSA:1.10.10.10 1 100 2.6E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_3148 e201cb3769edc421df84895413535fc8 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 82 1.3E-25 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VV1_0778 8e2f7546e885db5768ab025fe7ce49a5 376 Gene3D G3DSA:3.40.50.2000 104 204 1.8E-5 T 14-10-2018 VV1_0778 8e2f7546e885db5768ab025fe7ce49a5 376 Gene3D G3DSA:3.40.50.2000 205 366 1.3E-11 T 14-10-2018 VV1_0778 8e2f7546e885db5768ab025fe7ce49a5 376 SUPERFAMILY SSF53756 31 342 1.26E-20 T 14-10-2018 VV1_0778 8e2f7546e885db5768ab025fe7ce49a5 376 Pfam PF00534 Glycosyl transferases group 1 201 346 7.4E-10 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_2966 3bc60e85119a916008e424fd37a3030e 332 Pfam PF09375 Imelysin 35 310 1.4E-46 T 14-10-2018 IPR018976 Imelysin-like domain VV1_2966 3bc60e85119a916008e424fd37a3030e 332 Gene3D G3DSA:1.20.1420.20 25 332 2.2E-71 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VV2_1336 200230af0e9c86b698346cf5e4b4e386 538 PIRSF PIRSF038984 1 535 5.3E-241 T 14-10-2018 IPR028348 FAD dependent protein VV2_1336 200230af0e9c86b698346cf5e4b4e386 538 Gene3D G3DSA:3.30.70.2700 1 80 8.2E-30 T 14-10-2018 VV2_1336 200230af0e9c86b698346cf5e4b4e386 538 SUPERFAMILY SSF51905 100 529 3.73E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1336 200230af0e9c86b698346cf5e4b4e386 538 Pfam PF01593 Flavin containing amine oxidoreductase 214 266 3.2E-4 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VV2_1336 200230af0e9c86b698346cf5e4b4e386 538 Gene3D G3DSA:3.50.50.60 85 306 8.0E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV2_1336 200230af0e9c86b698346cf5e4b4e386 538 Gene3D G3DSA:3.50.50.60 470 533 8.9E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VV1_0803 64022159149f3679fa521297b906b27c 233 Pfam PF02348 Cytidylyltransferase 5 196 1.7E-27 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VV1_0803 64022159149f3679fa521297b906b27c 233 Gene3D G3DSA:3.90.550.10 1 230 1.9E-76 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_0803 64022159149f3679fa521297b906b27c 233 SUPERFAMILY SSF53448 1 229 1.13E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VV1_2272 852d8212cd484d461a495998e3a0bf5b 195 SUPERFAMILY SSF109604 4 184 3.14E-44 T 14-10-2018 VV1_2272 852d8212cd484d461a495998e3a0bf5b 195 Gene3D G3DSA:1.10.3210.10 1 195 3.9E-54 T 14-10-2018 VV1_2272 852d8212cd484d461a495998e3a0bf5b 195 Pfam PF13023 HD domain 15 169 4.8E-52 T 14-10-2018 IPR006674 HD domain VV1_1951 229ac5e831eda015de85bfa3e238911d 295 Gene3D G3DSA:3.40.50.300 22 263 1.4E-59 T 14-10-2018 VV1_1951 229ac5e831eda015de85bfa3e238911d 295 PIRSF PIRSF003092 6 287 1.5E-86 T 14-10-2018 IPR025501 ATP binding protein MinD VV1_1951 229ac5e831eda015de85bfa3e238911d 295 SUPERFAMILY SSF52540 22 283 7.88E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1951 229ac5e831eda015de85bfa3e238911d 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.8E-22 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VV2_1148 aeb95b185559f7dcfe59093a3136182a 112 SUPERFAMILY SSF52096 6 105 1.55E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VV2_1148 aeb95b185559f7dcfe59093a3136182a 112 Gene3D G3DSA:3.90.226.10 2 105 5.6E-28 T 14-10-2018 VV2_1148 aeb95b185559f7dcfe59093a3136182a 112 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 53 64 1.5E-15 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV2_1148 aeb95b185559f7dcfe59093a3136182a 112 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 24 41 1.5E-15 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV2_1148 aeb95b185559f7dcfe59093a3136182a 112 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 75 84 1.5E-15 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VV1_1335 a56b60b68c0673036ea0463408d56c39 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 8.9E-24 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VV1_1335 a56b60b68c0673036ea0463408d56c39 91 Pfam PF04077 DsrH like protein 8 85 9.3E-20 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VV1_1335 a56b60b68c0673036ea0463408d56c39 91 Gene3D G3DSA:3.40.1260.10 1 90 9.8E-23 T 14-10-2018 IPR027396 DsrEFH-like VV1_1335 a56b60b68c0673036ea0463408d56c39 91 SUPERFAMILY SSF75169 1 90 2.16E-20 T 14-10-2018 IPR027396 DsrEFH-like VV2_1173 10e9690a115850505e706d0c54439670 405 SUPERFAMILY SSF52540 108 368 1.68E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV2_1173 10e9690a115850505e706d0c54439670 405 Gene3D G3DSA:3.40.50.300 107 398 5.1E-57 T 14-10-2018 VV2_1173 10e9690a115850505e706d0c54439670 405 Gene3D G3DSA:1.10.1660.30 36 102 5.7E-6 T 14-10-2018 VV2_1173 10e9690a115850505e706d0c54439670 405 Pfam PF13614 AAA domain 110 296 5.4E-23 T 14-10-2018 IPR025669 AAA domain VV1_0152 27085369eeea873b39ea238be46dfa70 261 Pfam PF00005 ABC transporter 20 148 1.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VV1_0152 27085369eeea873b39ea238be46dfa70 261 Gene3D G3DSA:3.40.50.300 1 240 2.2E-57 T 14-10-2018 VV1_0152 27085369eeea873b39ea238be46dfa70 261 SMART SM00382 29 198 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain VV1_0152 27085369eeea873b39ea238be46dfa70 261 SUPERFAMILY SSF52540 3 216 1.22E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1968 6465d03ad9320729cbad837ab0404afb 160 Pfam PF03918 Cytochrome C biogenesis protein 9 151 1.5E-55 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VV1_1968 6465d03ad9320729cbad837ab0404afb 160 Gene3D G3DSA:1.10.8.640 20 106 6.0E-37 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VV2_1386 c97dd554864a878a54e91b1600d1baa9 371 Pfam PF01103 Surface antigen 89 294 1.7E-8 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VV2_1386 c97dd554864a878a54e91b1600d1baa9 371 Gene3D G3DSA:2.40.160.50 122 369 7.1E-9 T 14-10-2018 VV2_0622 154a3c1f4069dfdf87d065f0bca3a891 259 Gene3D G3DSA:1.20.120.350 9 114 1.5E-12 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily VV2_0622 154a3c1f4069dfdf87d065f0bca3a891 259 Pfam PF00520 Ion transport protein 21 226 3.3E-23 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VV2_0622 154a3c1f4069dfdf87d065f0bca3a891 259 SUPERFAMILY SSF81324 21 225 1.96E-20 T 14-10-2018 VV2_0622 154a3c1f4069dfdf87d065f0bca3a891 259 Gene3D G3DSA:1.10.287.70 116 230 8.8E-14 T 14-10-2018 VV2_0697 cb85b839e9883f92a83a7c0cb3ecb44a 142 Pfam PF07171 MlrC C-terminus 1 125 5.2E-22 T 14-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal VV2_0893 ae5c06a0ed16cf4e47e4c6c7cd2ba1bb 354 PIRSF PIRSF005508 3 354 7.3E-139 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VV2_0893 ae5c06a0ed16cf4e47e4c6c7cd2ba1bb 354 Gene3D G3DSA:1.20.1530.20 9 345 5.7E-26 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily VV2_0893 ae5c06a0ed16cf4e47e4c6c7cd2ba1bb 354 Pfam PF01758 Sodium Bile acid symporter family 61 257 1.0E-61 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VV2_0893 ae5c06a0ed16cf4e47e4c6c7cd2ba1bb 354 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 16 345 2.6E-142 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VV2_0436 0767f643ab495be0e1c4cdacafb4eb24 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 23 493 4.8E-204 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VV2_0436 0767f643ab495be0e1c4cdacafb4eb24 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 2.1E-187 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VV1_0137 a3700bb35865db31674276771582d719 284 Pfam PF00561 alpha/beta hydrolase fold 27 141 5.5E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VV1_0137 a3700bb35865db31674276771582d719 284 Gene3D G3DSA:3.40.50.1820 3 277 1.1E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0137 a3700bb35865db31674276771582d719 284 SUPERFAMILY SSF53474 10 282 6.28E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV2_1393 39d6438ae55227b21848b5c645c16dce 240 SUPERFAMILY SSF55469 1 239 1.01E-72 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VV2_1393 39d6438ae55227b21848b5c645c16dce 240 Pfam PF00881 Nitroreductase family 9 159 8.5E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VV2_1393 39d6438ae55227b21848b5c645c16dce 240 Gene3D G3DSA:3.40.109.10 1 240 5.4E-74 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VV2_1393 39d6438ae55227b21848b5c645c16dce 240 PIRSF PIRSF005426 1 240 9.7E-85 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VV1_2531 cf661b44df894646ef71eef7d7699964 228 SUPERFAMILY SSF52200 90 205 1.03E-17 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily VV1_2531 cf661b44df894646ef71eef7d7699964 228 Pfam PF13676 TIR domain 98 206 2.3E-14 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VV1_2531 cf661b44df894646ef71eef7d7699964 228 Gene3D G3DSA:3.40.50.10140 71 226 2.2E-23 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily VV1_1843 5472f6ab6851c4e4d464bfa18a6cc24c 422 Gene3D G3DSA:3.40.50.12780 9 325 9.1E-30 T 14-10-2018 VV1_1843 5472f6ab6851c4e4d464bfa18a6cc24c 422 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 6 394 2.7E-112 T 14-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related VV1_0882 64d2857a1d1c5e15a707e83e25c7ce22 646 Pfam PF05170 AsmA family 1 571 1.3E-179 T 14-10-2018 IPR007844 AsmA VV1_2666 5e8772112e4610d93eba3f7c75b60254 397 SUPERFAMILY SSF53756 7 366 1.02E-64 T 14-10-2018 VV1_2666 5e8772112e4610d93eba3f7c75b60254 397 Pfam PF00534 Glycosyl transferases group 1 186 346 5.7E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_2666 5e8772112e4610d93eba3f7c75b60254 397 Gene3D G3DSA:3.40.50.2000 172 353 1.1E-56 T 14-10-2018 VV1_2666 5e8772112e4610d93eba3f7c75b60254 397 Gene3D G3DSA:3.40.50.2000 74 363 1.1E-56 T 14-10-2018 VV1_2666 5e8772112e4610d93eba3f7c75b60254 397 Pfam PF13439 Glycosyltransferase Family 4 18 172 1.0E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VV1_0777 42c183d7e4d884c950acfd094969d7b7 303 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 213 3.3E-29 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VV1_0777 42c183d7e4d884c950acfd094969d7b7 303 SUPERFAMILY SSF51735 2 296 1.17E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_0777 42c183d7e4d884c950acfd094969d7b7 303 Gene3D G3DSA:3.40.50.720 1 280 5.4E-56 T 14-10-2018 VV1_2111 efad3c5eae6071709c9c45b401025a57 181 Gene3D G3DSA:1.20.1270.340 1 98 1.5E-14 T 14-10-2018 IPR038338 PriB/PriC superfamily VV1_2111 efad3c5eae6071709c9c45b401025a57 181 Pfam PF07445 Primosomal replication protein priC 5 178 2.4E-50 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC VV1_2938 5003ee3ed7a0ba5f79c89c8e6b55a517 258 Pfam PF01435 Peptidase family M48 48 257 6.6E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV1_2938 5003ee3ed7a0ba5f79c89c8e6b55a517 258 Gene3D G3DSA:3.30.2010.10 38 131 3.1E-38 T 14-10-2018 VV1_0316 733af52926620083e2449771ebed63f5 167 PIRSF PIRSF006162 5 166 4.4E-52 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VV1_0316 733af52926620083e2449771ebed63f5 167 SUPERFAMILY SSF101307 8 160 2.49E-47 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VV1_0316 733af52926620083e2449771ebed63f5 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 2.5E-51 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VV2_0048 ce2ce7a3089c4aac13cc3305b3e8fbbd 201 SMART SM00014 75 175 5.9E-5 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV2_0048 ce2ce7a3089c4aac13cc3305b3e8fbbd 201 SUPERFAMILY SSF48317 40 179 4.58E-28 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VV2_0048 ce2ce7a3089c4aac13cc3305b3e8fbbd 201 Gene3D G3DSA:1.20.144.10 104 186 5.8E-17 T 14-10-2018 VV2_0048 ce2ce7a3089c4aac13cc3305b3e8fbbd 201 Pfam PF01569 PAP2 superfamily 98 180 4.2E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VV2_1117 db3486c540fa0157cc37eab6ec6ff406 235 SUPERFAMILY SSF53720 10 182 2.62E-8 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VV2_1117 db3486c540fa0157cc37eab6ec6ff406 235 Gene3D G3DSA:3.40.605.10 7 233 5.4E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VV2_0509 c02ebe596916ace262ac5d17337cfcaf 86 Pfam PF11216 Protein of unknown function (DUF3012) 55 86 1.0E-18 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VV2_0509 c02ebe596916ace262ac5d17337cfcaf 86 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 2.7E-18 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 VV2_0648 1fd3a0f5120e2f43b31b3c853fc88805 469 Pfam PF06122 Conjugative relaxosome accessory transposon protein 39 391 6.4E-102 T 14-10-2018 IPR010927 Type IV conjugative transfer system protein TraH VV1_0846 4c161ea6f02eb1af29cae267865698b2 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 3.5E-32 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VV1_0846 4c161ea6f02eb1af29cae267865698b2 135 Gene3D G3DSA:3.30.420.270 61 129 2.6E-10 T 14-10-2018 VV1_0232 2a8eb4f63c254f0ddabe4ac089673d04 143 PIRSF PIRSF028687 1 143 7.7E-59 T 14-10-2018 IPR007293 Flagellar protein FlgP VV1_0232 2a8eb4f63c254f0ddabe4ac089673d04 143 Pfam PF02169 LPP20 lipoprotein 21 118 8.5E-8 T 14-10-2018 IPR024952 Lipoprotein LPP20-like VV2_0798 43305f64e3bb45c0878b42d1d816c2e3 251 Pfam PF02754 Cysteine-rich domain 139 223 2.6E-12 T 14-10-2018 IPR004017 Cysteine-rich domain VV2_0798 43305f64e3bb45c0878b42d1d816c2e3 251 Pfam PF02754 Cysteine-rich domain 11 91 1.7E-11 T 14-10-2018 IPR004017 Cysteine-rich domain VV2_1067 9fecc572988eaa2734effbaac024db8a 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 157 4.4E-29 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VV2_0627 3950d0486717b52ad7f941de9e8ca071 330 Pfam PF13280 WYL domain 165 318 3.9E-19 T 14-10-2018 IPR026881 WYL domain VV1_2729 d1b79a72e542a02043f088d18c7aa003 390 Pfam PF04303 PrpF protein 3 385 2.5E-173 T 14-10-2018 IPR007400 PrpF protein VV1_2729 d1b79a72e542a02043f088d18c7aa003 390 Gene3D G3DSA:3.10.310.10 178 368 1.5E-148 T 14-10-2018 VV1_2729 d1b79a72e542a02043f088d18c7aa003 390 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 1 389 5.6E-228 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 VV1_2729 d1b79a72e542a02043f088d18c7aa003 390 Gene3D G3DSA:3.10.310.10 8 382 1.5E-148 T 14-10-2018 VV1_2729 d1b79a72e542a02043f088d18c7aa003 390 SUPERFAMILY SSF54506 183 388 3.61E-74 T 14-10-2018 VV1_2729 d1b79a72e542a02043f088d18c7aa003 390 SUPERFAMILY SSF54506 2 179 4.71E-70 T 14-10-2018 VV1_1720 4f725c69966af975a0b622b70a836d79 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 333 1.4E-40 T 14-10-2018 IPR000160 GGDEF domain VV1_1720 4f725c69966af975a0b622b70a836d79 362 Gene3D G3DSA:3.30.70.270 166 334 1.3E-46 T 14-10-2018 VV1_1720 4f725c69966af975a0b622b70a836d79 362 SMART SM00267 166 333 8.5E-49 T 14-10-2018 IPR000160 GGDEF domain VV1_1720 4f725c69966af975a0b622b70a836d79 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 329 1.3E-37 T 14-10-2018 IPR000160 GGDEF domain VV1_1720 4f725c69966af975a0b622b70a836d79 362 SUPERFAMILY SSF55073 182 333 5.89E-40 T 14-10-2018 IPR029787 Nucleotide cyclase VV1_0387 054d96fe1fb06cfb34da329c5928cecc 122 Pfam PF07410 Streptococcus thermophilus bacteriophage Gp111 protein 7 44 7.6E-8 T 14-10-2018 IPR010878 Protein of unknown function Gp111 VV1_0950 d5288a1aa4178f75531a87f21cfc276c 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 4.7E-22 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane VV1_2958 a7d7f333769586003131330e53766737 224 SUPERFAMILY SSF53098 20 175 1.59E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV1_2958 a7d7f333769586003131330e53766737 224 Pfam PF01609 Transposase DDE domain 53 181 2.8E-9 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VV1_2958 a7d7f333769586003131330e53766737 224 Pfam PF13006 Insertion element 4 transposase N-terminal 3 36 1.3E-5 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal VV1_1723 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF07670 Nucleoside recognition 95 191 3.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VV1_1723 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.7E-26 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VV1_1723 118b28dab1ed18dc6be54d7411882b28 420 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 417 8.7E-71 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VV1_1723 118b28dab1ed18dc6be54d7411882b28 420 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 417 7.9E-150 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VV1_1904 187bc8d015991e880dbf5729d79b8990 144 Pfam PF09842 Predicted membrane protein (DUF2069) 16 118 1.1E-33 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VV1_3175 0edd15cfa43651c56408c1de5f3cecb7 77 SUPERFAMILY SSF109604 4 77 7.33E-20 T 14-10-2018 VV1_3175 0edd15cfa43651c56408c1de5f3cecb7 77 Gene3D G3DSA:1.10.3210.10 1 77 1.3E-33 T 14-10-2018 VV1_3175 0edd15cfa43651c56408c1de5f3cecb7 77 Pfam PF13023 HD domain 11 77 2.7E-8 T 14-10-2018 IPR006674 HD domain VV1_2961 a2580cbd05ec8337dce51ae7dce25a70 222 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 6.1E-59 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 VV2_0438 5ca62147b8308f0584ded8176f8a9611 377 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 12 371 3.5E-76 T 14-10-2018 IPR017740 Type VI secretion system-associated, ImpA VV2_0438 5ca62147b8308f0584ded8176f8a9611 377 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 144 4.5E-30 T 14-10-2018 IPR010657 ImpA, N-terminal VV1_0667 7c2e4e94d38e585ebb305b0ba7f818e7 158 Pfam PF12821 Threonine/Serine exporter, ThrE 14 148 1.2E-35 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE VV1_0116 a917351d97851bdba935f694ffd623bc 542 Gene3D G3DSA:3.40.50.300 3 201 6.5E-8 T 14-10-2018 VV2_0534 64ef3308d02fdfa193b926da1c2b9b72 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 2.9E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VV2_0534 64ef3308d02fdfa193b926da1c2b9b72 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.9E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VV2_0534 64ef3308d02fdfa193b926da1c2b9b72 302 Pfam PF00248 Aldo/keto reductase family 16 291 1.7E-59 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain VV2_0534 64ef3308d02fdfa193b926da1c2b9b72 302 SUPERFAMILY SSF51430 5 299 9.04E-69 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VV2_0534 64ef3308d02fdfa193b926da1c2b9b72 302 Gene3D G3DSA:3.20.20.100 1 302 5.2E-99 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VV1_1909 f9f2b12dfca0a0bb0f9db49cafdac1ef 356 Pfam PF01594 AI-2E family transporter 20 345 2.5E-78 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VV1_0717 cad27932dfa4f4a83c2e4f744777ff28 217 Pfam PF10986 Protein of unknown function (DUF2796) 29 140 4.7E-31 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VV1_0717 cad27932dfa4f4a83c2e4f744777ff28 217 Pfam PF10986 Protein of unknown function (DUF2796) 129 212 3.0E-20 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 VV2_0218 3321e1535750a99582d73f6f5de2a920 434 Pfam PF00294 pfkB family carbohydrate kinase 139 294 2.1E-11 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB VV2_0218 3321e1535750a99582d73f6f5de2a920 434 SUPERFAMILY SSF53613 34 417 7.89E-45 T 14-10-2018 IPR029056 Ribokinase-like VV2_0635 e47a9551734b9956269b07f721f6f79b 493 Pfam PF03743 Bacterial conjugation TrbI-like protein 238 435 2.3E-26 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI VV1_2793 821b78907f9c1143d684b98f64b4e528 123 Pfam PF03788 LrgA family 23 114 4.8E-26 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 VV2_0347 f91f990397d1fa08d13d106cfb1980ae 521 Pfam PF08811 Protein of unknown function (DUF1800) 48 518 1.5E-93 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 VV1_2857 0fb55bba50fb54ea033f70d256bd231a 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.4E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 VV1_0410 827cdba7315de3242654b5db4304fc61 203 Pfam PF09335 SNARE associated Golgi protein 39 159 3.1E-24 T 14-10-2018 IPR032816 SNARE associated Golgi protein VV2_1369 0bb3096465dea5b21467ee31dd11823b 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 123 9.4E-30 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VV2_1369 0bb3096465dea5b21467ee31dd11823b 127 PIRSF PIRSF005610 1 121 1.4E-13 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VV1_1135 443f932af8cfb6e8be729609bff822f1 156 Pfam PF01878 EVE domain 2 148 7.0E-56 T 14-10-2018 IPR002740 EVE domain VV1_1135 443f932af8cfb6e8be729609bff822f1 156 SUPERFAMILY SSF88697 1 148 1.14E-60 T 14-10-2018 IPR015947 PUA-like superfamily VV1_1135 443f932af8cfb6e8be729609bff822f1 156 Gene3D G3DSA:3.10.590.10 1 153 1.3E-65 T 14-10-2018 VV1_0400 b91be5f055076f593b34fc5969914943 832 SUPERFAMILY SSF52540 197 494 5.72E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_0400 b91be5f055076f593b34fc5969914943 832 Gene3D G3DSA:3.40.50.300 183 359 2.7E-5 T 14-10-2018 VV2_1578 2819e87196d243361b34f76e5cc9dd31 346 Gene3D G3DSA:3.40.50.2000 155 326 3.5E-60 T 14-10-2018 VV2_1578 2819e87196d243361b34f76e5cc9dd31 346 Gene3D G3DSA:3.40.50.2000 44 335 3.5E-60 T 14-10-2018 VV2_1578 2819e87196d243361b34f76e5cc9dd31 346 Pfam PF13439 Glycosyltransferase Family 4 37 158 1.4E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VV2_1578 2819e87196d243361b34f76e5cc9dd31 346 SUPERFAMILY SSF53756 7 342 9.81E-70 T 14-10-2018 VV2_1578 2819e87196d243361b34f76e5cc9dd31 346 Pfam PF00534 Glycosyl transferases group 1 173 319 5.5E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 VV1_2886 8e67cb53637fdd6da31a760f10a80d2d 260 Pfam PF11150 Protein of unknown function (DUF2927) 33 230 1.7E-64 T 14-10-2018 IPR021323 Protein of unknown function DUF2927 VV1_2201 a1e4842e5b45524c8a9d6adac73716a5 256 Pfam PF03741 Integral membrane protein TerC family 16 203 1.9E-42 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VV1_1983 ddd422465e81f277519517e27956fcc9 176 Pfam PF04315 Elongation factor P hydroxylase 11 168 7.1E-73 T 14-10-2018 IPR007411 Elongation factor P hydroxylase VV1_1523 e18b36254fc2e6edbe5b89283f48a7a7 185 Pfam PF02325 YGGT family 10 77 2.5E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VV1_1523 e18b36254fc2e6edbe5b89283f48a7a7 185 Pfam PF02325 YGGT family 109 173 1.9E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 VV1_0609 aceb12196e48e3b0aa5d5ba35e6d5071 149 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.0E-38 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 VV1_1894 2d3e0e9e639fd9abe5f747b0d6e4927a 674 Pfam PF05488 PAAR motif 19 88 2.1E-23 T 14-10-2018 IPR008727 PAAR motif VV1_1894 2d3e0e9e639fd9abe5f747b0d6e4927a 674 Gene3D G3DSA:2.60.200.60 57 96 2.5E-11 T 14-10-2018 VV1_1894 2d3e0e9e639fd9abe5f747b0d6e4927a 674 Gene3D G3DSA:2.60.200.60 1 56 3.0E-13 T 14-10-2018 VV2_0037 f75b7a05c4d1c7447abbb3c289f650b3 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 407 9.1E-15 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VV1_2044 b9000c830c20bf61583367576b21d728 435 Pfam PF13395 HNH endonuclease 216 272 1.7E-6 T 14-10-2018 IPR003615 HNH nuclease VV1_2044 b9000c830c20bf61583367576b21d728 435 Gene3D G3DSA:3.30.40.60 195 289 4.7E-6 T 14-10-2018 VV2_1694 ff61860e35e57d706db0bd8044583ded 350 Pfam PF01757 Acyltransferase family 5 329 4.1E-18 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VV2_0298 525c533029fa3204b0304483ff035ffb 280 Gene3D G3DSA:2.60.120.730 11 141 1.2E-8 T 14-10-2018 VV1_2325 412e270d67c3530ae5865c8551a8c5f1 434 Pfam PF06629 MltA-interacting protein MipA 43 236 2.4E-20 T 14-10-2018 IPR010583 MltA-interacting MipA VV2_1576 82cdfd6b5599fde9f87c51ae64de718d 343 Pfam PF13439 Glycosyltransferase Family 4 13 158 4.3E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VV2_1576 82cdfd6b5599fde9f87c51ae64de718d 343 SUPERFAMILY SSF53756 10 313 9.94E-34 T 14-10-2018 VV2_1576 82cdfd6b5599fde9f87c51ae64de718d 343 Gene3D G3DSA:3.40.50.2000 176 315 6.2E-17 T 14-10-2018 VV2_1576 82cdfd6b5599fde9f87c51ae64de718d 343 Gene3D G3DSA:3.40.50.2000 3 175 4.3E-11 T 14-10-2018 VV2_1576 82cdfd6b5599fde9f87c51ae64de718d 343 Pfam PF13692 Glycosyl transferases group 1 182 311 2.3E-15 T 14-10-2018 VV1_3136 a187052160f702892328087f2372b22d 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 2.4E-28 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 VV1_2866 4aebb11d096a893f9d50d345867f11bc 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 309 1.5E-168 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VV1_2866 4aebb11d096a893f9d50d345867f11bc 310 Gene3D G3DSA:3.40.50.150 88 292 2.1E-43 T 14-10-2018 VV1_2866 4aebb11d096a893f9d50d345867f11bc 310 SUPERFAMILY SSF53335 4 287 2.91E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_2633 f38363ffaecd469c72278b49d7511727 66 Gene3D G3DSA:3.40.30.10 1 66 7.4E-12 T 14-10-2018 VV1_2633 f38363ffaecd469c72278b49d7511727 66 SUPERFAMILY SSF52833 3 60 1.64E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV1_2633 f38363ffaecd469c72278b49d7511727 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 57 2.2E-11 T 14-10-2018 IPR008554 Glutaredoxin-like VV2_0259 3ce189abc12d0d2a723a5c931dd33353 198 Pfam PF09997 Predicted membrane protein (DUF2238) 39 176 5.4E-53 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VV2_0259 3ce189abc12d0d2a723a5c931dd33353 198 PIRSF PIRSF020606 1 198 6.5E-84 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VV2_0770 e5d726a8cacc63996f6a96e13a63c47b 157 Gene3D G3DSA:3.40.30.10 2 157 6.4E-60 T 14-10-2018 VV2_0770 e5d726a8cacc63996f6a96e13a63c47b 157 Pfam PF08534 Redoxin 4 154 4.9E-39 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VV2_0770 e5d726a8cacc63996f6a96e13a63c47b 157 SUPERFAMILY SSF52833 1 156 1.89E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily VV2_1068 d71139605329e4a84e6c496d8ecd4195 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 1.4E-115 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VV2_1068 d71139605329e4a84e6c496d8ecd4195 433 PIRSF PIRSF006066 4 433 7.8E-168 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV2_1068 d71139605329e4a84e6c496d8ecd4195 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 4.4E-138 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VV2_1274 bdfdee49dae8536e3cb424c10113c809 365 Pfam PF01699 Sodium/calcium exchanger protein 224 363 2.0E-7 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VV2_1274 bdfdee49dae8536e3cb424c10113c809 365 Pfam PF01699 Sodium/calcium exchanger protein 43 195 1.1E-16 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VV1_3149 aa8abe897384cbf76cde90a42e3032b9 141 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 134 4.1E-40 T 14-10-2018 IPR039366 YscW/ExsB VV1_0204 f2238f598278eb337c568d7aeabb434f 100 Pfam PF10973 Protein of unknown function (DUF2799) 7 88 7.7E-15 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 VV1_1196 1f1148fd4f9a5f1ca9b79336f0eee913 145 SUPERFAMILY SSF55729 10 118 3.92E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase VV1_1196 1f1148fd4f9a5f1ca9b79336f0eee913 145 Gene3D G3DSA:3.40.630.30 15 138 2.3E-10 T 14-10-2018 VV1_1196 1f1148fd4f9a5f1ca9b79336f0eee913 145 Pfam PF13673 Acetyltransferase (GNAT) domain 32 117 4.7E-10 T 14-10-2018 IPR000182 GNAT domain VV1_1170 6fede2776f1c9028fdb1c98476cbbce5 126 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 12 117 9.0E-56 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VV1_1170 6fede2776f1c9028fdb1c98476cbbce5 126 Pfam PF07226 Protein of unknown function (DUF1422) 11 121 4.5E-48 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 VV1_0197 352b14d850a4cd8c7caaec66f62e1b52 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 5.6E-68 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 VV2_0133 76f1211e56989bdc6eb72d3843b614ce 728 SUPERFAMILY SSF48695 275 713 1.54E-25 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily VV2_0133 76f1211e56989bdc6eb72d3843b614ce 728 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 47 722 2.4E-163 T 14-10-2018 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC VV2_0133 76f1211e56989bdc6eb72d3843b614ce 728 Gene3D G3DSA:3.40.970.50 316 362 2.2E-5 T 14-10-2018 VV1_2255 94933a401921700df150d145df973141 541 SMART SM00283 271 532 8.2E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2255 94933a401921700df150d145df973141 541 SUPERFAMILY SSF58104 224 534 1.01E-59 T 14-10-2018 VV1_2255 94933a401921700df150d145df973141 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 497 1.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VV1_2255 94933a401921700df150d145df973141 541 Gene3D G3DSA:1.10.287.950 203 534 2.2E-62 T 14-10-2018 VV1_2255 94933a401921700df150d145df973141 541 SMART SM00304 203 256 2.0E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VV1_1781 2150dc08fd59e6cbff4217d372ddcb9c 376 Pfam PF05940 NnrS protein 8 371 2.2E-102 T 14-10-2018 IPR010266 NnrS VV2_0574 add10871a0e90e9469bc99cd1fd3ebc9 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 9.1E-25 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VV1_0312 03fe7394b625bb55505f5f5914148b96 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 1.2E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VV1_0312 03fe7394b625bb55505f5f5914148b96 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VV1_2184 b597da06f1eea2163bbfee0c4f235cff 1220 Pfam PF12128 Protein of unknown function (DUF3584) 12 1191 2.6E-164 T 14-10-2018 IPR021979 Protein of unknown function DUF3584 VV2_0638 2a1911eb74bca50ad29744271731718b 387 Gene3D G3DSA:3.40.50.300 1 328 8.4E-19 T 14-10-2018 VV2_0638 2a1911eb74bca50ad29744271731718b 387 SUPERFAMILY SSF52540 2 279 1.43E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2012 87af584844fbfada2b104c242f9f2a14 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 9.5E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VV1_1562 2922fcc59715036b038ea790a86694b2 156 PIRSF PIRSF004923 1 156 3.0E-39 T 14-10-2018 IPR026268 Protein RseC VV1_1562 2922fcc59715036b038ea790a86694b2 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 149 4.6E-31 T 14-10-2018 VV1_3205 3d7b7719fa136652b473450512313393 502 SUPERFAMILY SSF56601 40 383 7.57E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VV1_3205 3d7b7719fa136652b473450512313393 502 Pfam PF00144 Beta-lactamase 52 372 3.3E-51 T 14-10-2018 IPR001466 Beta-lactamase-related VV1_3205 3d7b7719fa136652b473450512313393 502 Gene3D G3DSA:3.40.710.10 47 384 6.8E-72 T 14-10-2018 VV2_0555 d670206d77eee90968e7144bf7e7cefb 187 SUPERFAMILY SSF49503 42 154 1.15E-15 T 14-10-2018 IPR008972 Cupredoxin VV2_0555 d670206d77eee90968e7144bf7e7cefb 187 Gene3D G3DSA:2.60.40.420 28 122 3.4E-11 T 14-10-2018 IPR008972 Cupredoxin VV1_1919 248f7dd7fe4149ad97899aba67211995 110 Pfam PF13698 Domain of unknown function (DUF4156) 28 109 1.3E-22 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 VV2_0944 cd9f826d9cf92d7c3fd337d3d0345bd8 65 Pfam PF04400 (Na+)-NQR maturation NqrM 22 61 3.7E-18 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VV1_2607 acbe28950f20f69b76f53dca121691f5 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 9.8E-54 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 VV2_1073 6be89084b6de04e26f47238a92c63ef2 173 Pfam PF10688 Bacterial inner membrane protein 5 161 4.1E-53 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VV2_1073 6be89084b6de04e26f47238a92c63ef2 173 PIRSF PIRSF011443 1 172 1.8E-45 T 14-10-2018 IPR026267 Inner membrane protein YgjV VV2_0828 82a54bcbaf8d630cb4fef90429778736 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 2.5E-35 T 14-10-2018 IPR007416 Protein of unknown function DUF469 VV1_2672 b0c5dd89911059b62bbcddd1ac3d4297 477 Pfam PF13807 G-rich domain on putative tyrosine kinase 362 442 1.3E-6 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain VV2_1363 2e6bb65fb38a00306faf428196e4cb1e 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1363 2e6bb65fb38a00306faf428196e4cb1e 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1363 2e6bb65fb38a00306faf428196e4cb1e 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1363 2e6bb65fb38a00306faf428196e4cb1e 273 SUPERFAMILY SSF46785 5 86 3.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VV2_1363 2e6bb65fb38a00306faf428196e4cb1e 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 7.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VV2_1363 2e6bb65fb38a00306faf428196e4cb1e 273 Gene3D G3DSA:1.10.10.10 3 88 4.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV1_2906 077c106a8d3e9cda9fa3b5ff014a3035 212 Pfam PF02698 DUF218 domain 33 147 7.6E-23 T 14-10-2018 IPR003848 Domain of unknown function DUF218 VV1_2906 077c106a8d3e9cda9fa3b5ff014a3035 212 Gene3D G3DSA:3.40.50.620 15 150 7.5E-27 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VV1_0607 341404524b558e0b7b00831b6d9e6140 196 Gene3D G3DSA:3.40.50.1820 8 196 4.9E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0607 341404524b558e0b7b00831b6d9e6140 196 SUPERFAMILY SSF53474 5 194 5.69E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold VV1_0607 341404524b558e0b7b00831b6d9e6140 196 Pfam PF05728 Uncharacterised protein family (UPF0227) 9 194 1.0E-69 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VV1_2286 7f14680c815e6e9aabefbf87a8c28054 319 Pfam PF14321 Domain of unknown function (DUF4382) 29 176 1.4E-24 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 VV2_0355 17772691993984d462d7a4af32778859 67 Pfam PF11661 Protein of unknown function (DUF2986) 1 42 3.9E-20 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 VV1_1657 d5e551d9cd25904e36f44fa7ec81ab13 122 PIRSF PIRSF006287 1 122 2.7E-49 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VV1_1657 d5e551d9cd25904e36f44fa7ec81ab13 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.722 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VV1_1657 d5e551d9cd25904e36f44fa7ec81ab13 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 7.0E-66 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VV1_1657 d5e551d9cd25904e36f44fa7ec81ab13 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 4.1E-42 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 VV1_0896 7b4c85cdf62d985e187fd98cf78407b4 181 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 174 16.354 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VV1_0896 7b4c85cdf62d985e187fd98cf78407b4 181 Pfam PF04220 Der GTPase activator (YihI) 21 171 1.5E-43 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 VV1_3244 913d8bfc6d75d2634caf716d683a5340 131 Gene3D G3DSA:2.170.150.70 20 129 2.5E-17 T 14-10-2018 VV1_3244 913d8bfc6d75d2634caf716d683a5340 131 SUPERFAMILY SSF51316 19 111 4.39E-16 T 14-10-2018 IPR011057 Mss4-like superfamily VV1_0405 f72c5d1b178bff9515d6bee9ea9c8b12 251 Pfam PF05742 Transport and Golgi organisation 2 1 120 4.2E-9 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 VV1_3037 0f894014f92c059bf2aa91ca1fd1362e 213 SUPERFAMILY SSF48452 75 188 1.64E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_3037 0f894014f92c059bf2aa91ca1fd1362e 213 Gene3D G3DSA:1.25.40.10 116 208 4.2E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV2_1196 6db8fd1a3fd272bfbb6e193a4611f5c3 263 Pfam PF14247 Putative metallopeptidase 36 258 6.8E-66 T 14-10-2018 IPR025644 Putative metallopeptidase VV1_1865 a95163e4e039406f515b58f04b6add3d 282 Pfam PF01148 Cytidylyltransferase family 4 282 7.6E-68 T 14-10-2018 VV1_1865 a95163e4e039406f515b58f04b6add3d 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 240 266 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VV2_1372 728098cff36ce11d71fa9414acc16cac 250 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 1.7E-55 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VV2_1372 728098cff36ce11d71fa9414acc16cac 250 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.6E-57 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VV1_1888 d1ae86ffddf8701ab3982935384d7d37 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 399 1.7E-135 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 VV2_0342 cafb07259001dca4e8923d06c1e96443 155 Pfam PF04143 Sulphur transport 46 140 2.0E-6 T 14-10-2018 IPR007272 Sulphur transport domain VV1_2165 4ac1199909f58ab872c27c6fcf486dc9 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 99 1.7E-35 T 14-10-2018 IPR011846 Cyd operon protein YbgE VV1_2165 4ac1199909f58ab872c27c6fcf486dc9 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 96 3.3E-28 T 14-10-2018 IPR011846 Cyd operon protein YbgE VV1_2566 81c7e02cff62a56b2f40589073232310 142 Gene3D G3DSA:3.90.1720.10 20 142 1.0E-37 T 14-10-2018 VV1_2566 81c7e02cff62a56b2f40589073232310 142 Pfam PF00877 NlpC/P60 family 35 139 2.0E-27 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VV1_2566 81c7e02cff62a56b2f40589073232310 142 SUPERFAMILY SSF54001 25 140 3.43E-37 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VV1_2408 a08695c4b872aa436dc403918e6495de 434 SUPERFAMILY SSF52540 16 314 1.17E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_2408 a08695c4b872aa436dc403918e6495de 434 Pfam PF07693 KAP family P-loop domain 22 333 2.0E-40 T 14-10-2018 IPR011646 KAP family P-loop domain VV1_1399 3a3a68c58826c9214999b5b8bb3265b5 73 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 65 1.5E-25 T 14-10-2018 IPR014318 Phage shock protein, PspG VV1_1399 3a3a68c58826c9214999b5b8bb3265b5 73 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 2 65 1.2E-24 T 14-10-2018 IPR014318 Phage shock protein, PspG VV1_2015 e2d9ec2190a862d90d7e2e5c7314d817 97 SUPERFAMILY SSF54909 1 92 4.29E-27 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_2015 e2d9ec2190a862d90d7e2e5c7314d817 97 Gene3D G3DSA:3.30.70.100 1 95 4.6E-26 T 14-10-2018 VV1_2015 e2d9ec2190a862d90d7e2e5c7314d817 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 3.5E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VV2_0059 fcd138ee60301ed39d1791d2d755f9c7 206 Pfam PF01810 LysE type translocator 15 204 1.5E-24 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV2_0059 fcd138ee60301ed39d1791d2d755f9c7 206 PIRSF PIRSF006324 1 206 6.8E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV1_1756 5e0c455dbd480992f2456bd071305863 321 Gene3D G3DSA:1.20.81.30 145 257 1.3E-6 T 14-10-2018 VV1_1756 5e0c455dbd480992f2456bd071305863 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 279 9.9E-19 T 14-10-2018 IPR018076 Type II secretion system F domain VV1_2047 ba42e7ac5579507b1b7289f30f1dbdc6 442 Pfam PF07804 HipA-like C-terminal domain 151 401 5.9E-42 T 14-10-2018 IPR012893 HipA-like, C-terminal VV1_2047 ba42e7ac5579507b1b7289f30f1dbdc6 442 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 5 105 2.8E-30 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 VV1_2047 ba42e7ac5579507b1b7289f30f1dbdc6 442 Pfam PF13657 HipA N-terminal domain 6 104 2.5E-25 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 VV1_2134 e0a95c46db212edb69bfd07d0247711a 102 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 1.8E-6 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 VV1_1243 ee14484e30af3ebbfc532e45e0d1a817 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 2.0E-262 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily VV1_1243 ee14484e30af3ebbfc532e45e0d1a817 567 Gene3D G3DSA:1.20.1730.10 5 328 1.6E-34 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VV1_1243 ee14484e30af3ebbfc532e45e0d1a817 567 Gene3D G3DSA:1.20.1730.10 348 556 5.1E-27 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VV1_1243 ee14484e30af3ebbfc532e45e0d1a817 567 Pfam PF00474 Sodium:solute symporter family 368 489 3.0E-19 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VV1_1243 ee14484e30af3ebbfc532e45e0d1a817 567 Pfam PF00474 Sodium:solute symporter family 33 302 2.8E-33 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VV2_1281 7931c932e35bd76fc9a0ca118dc018b0 437 Pfam PF02264 LamB porin 80 437 9.1E-74 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1281 7931c932e35bd76fc9a0ca118dc018b0 437 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 108 414 4.0E-41 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VV2_1281 7931c932e35bd76fc9a0ca118dc018b0 437 SUPERFAMILY SSF56935 79 437 9.16E-92 T 14-10-2018 VV2_1281 7931c932e35bd76fc9a0ca118dc018b0 437 Gene3D G3DSA:2.40.170.10 78 437 5.1E-71 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VV2_0542 fed4f319a3e799d361b3bf7a7ab18b23 412 Pfam PF01566 Natural resistance-associated macrophage protein 56 379 9.5E-19 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 VV2_1636 5e2d5cbbc2985dd425303a6734cc2079 199 SUPERFAMILY SSF103473 2 185 5.36E-7 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_1006 31d0383e31c7b65a66165eeef2b62bfc 404 Pfam PF02687 FtsX-like permease family 305 396 9.4E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV2_1006 31d0383e31c7b65a66165eeef2b62bfc 404 Pfam PF12704 MacB-like periplasmic core domain 19 238 1.3E-22 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VV2_1211 3083584b7676e9ffffe31683de4fcda5 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 5.4E-33 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT VV1_0244 3cd540c6b2c65b6d8280e73ab234bd9d 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 3.2E-14 T 14-10-2018 IPR021494 Protein of unknown function DUF3149 VV2_0651 71779ffb3edc0aef891f18339fe6085c 395 Pfam PF07690 Major Facilitator Superfamily 212 387 2.4E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VV2_0651 71779ffb3edc0aef891f18339fe6085c 395 Gene3D G3DSA:1.20.1250.20 8 198 2.0E-6 T 14-10-2018 VV2_0651 71779ffb3edc0aef891f18339fe6085c 395 Gene3D G3DSA:1.20.1250.20 201 384 2.3E-14 T 14-10-2018 VV2_0651 71779ffb3edc0aef891f18339fe6085c 395 SUPERFAMILY SSF103473 12 384 8.63E-29 T 14-10-2018 IPR036259 MFS transporter superfamily VV2_0050 2015728486d16ec7b1d54b2595efd452 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 1.4E-135 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VV1_0599 d5e2ae1ce539f711d682c6bdf8534ef8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.345 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VV1_0599 d5e2ae1ce539f711d682c6bdf8534ef8 142 PIRSF PIRSF002181 1 142 1.3E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VV1_0599 d5e2ae1ce539f711d682c6bdf8534ef8 142 SUPERFAMILY SSF52161 1 140 9.42E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0599 d5e2ae1ce539f711d682c6bdf8534ef8 142 Pfam PF00572 Ribosomal protein L13 15 138 4.5E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VV1_0599 d5e2ae1ce539f711d682c6bdf8534ef8 142 Gene3D G3DSA:3.90.1180.10 1 142 4.3E-63 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VV1_0599 d5e2ae1ce539f711d682c6bdf8534ef8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VV1_0599 d5e2ae1ce539f711d682c6bdf8534ef8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.2E-64 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VV2_1098 45d9a0d3d5bd904f5a6f36f1653f29fb 65 Pfam PF04982 HPP family 2 59 1.7E-15 T 14-10-2018 IPR007065 HPP VV1_2968 78971818c9949e73838077c8fdf35566 427 Pfam PF09375 Imelysin 47 405 1.8E-98 T 14-10-2018 IPR018976 Imelysin-like domain VV1_2968 78971818c9949e73838077c8fdf35566 427 Gene3D G3DSA:1.20.1420.20 26 410 4.4E-84 T 14-10-2018 IPR038352 Imelysin-like domain superfamily VV2_1201 1b01efe4b781f6dcde31b659775d74d0 91 Pfam PF11280 Protein of unknown function (DUF3081) 13 87 7.6E-29 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 VV2_1627 aa3c7940a05946d62b06e25e4970b4b0 407 Pfam PF04932 O-Antigen ligase 185 340 1.9E-13 T 14-10-2018 IPR007016 O-antigen ligase-related VV1_0408 385bfce738c87c29158831356f96e523 209 Pfam PF09335 SNARE associated Golgi protein 50 158 2.7E-13 T 14-10-2018 IPR032816 SNARE associated Golgi protein VV1_1543 7247b56a2b56e6266c2889136bd89390 206 Pfam PF01810 LysE type translocator 15 200 1.9E-42 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VV2_1606 0ac8406f96f6a101d78096db0e8cf1a6 99 Gene3D G3DSA:3.30.70.860 1 99 6.0E-40 T 14-10-2018 IPR035571 UPF0234-like, C-terminal VV2_1606 0ac8406f96f6a101d78096db0e8cf1a6 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 7.5E-30 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VV1_0668 26e35175691b43703fc28bf5f8b17d03 257 Pfam PF06738 Putative threonine/serine exporter 18 249 9.7E-67 T 14-10-2018 IPR010619 Putative threonine/serine exporter VV1_1893 0e53bd970efe518d49b453a9b3484fa9 285 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 85 194 9.9E-17 T 14-10-2018 IPR032871 AHH domain-containing protein VV1_0334 b00e4a519ac119cb360a302f17dad387 179 Pfam PF11810 Domain of unknown function (DUF3332) 5 175 4.6E-43 T 14-10-2018 IPR021768 Protein of unknown function DUF3332 VV2_0443 3492843eff2472529bbd90163aa48449 440 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 440 1.6E-141 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VV2_0443 3492843eff2472529bbd90163aa48449 440 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 438 9.5E-134 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VV1_2195 ca4e1d5920c12e11145aca43a7429017 156 Gene3D G3DSA:3.30.460.10 4 156 1.3E-21 T 14-10-2018 VV1_2195 ca4e1d5920c12e11145aca43a7429017 156 SUPERFAMILY SSF81301 7 155 1.08E-32 T 14-10-2018 VV1_2195 ca4e1d5920c12e11145aca43a7429017 156 Pfam PF04229 GrpB protein 7 155 3.5E-24 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase VV2_0775 fc96e08b8a0ffa3c144081031a6e14aa 253 Pfam PF13230 Glutamine amidotransferases class-II 25 197 1.1E-19 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VV2_0775 fc96e08b8a0ffa3c144081031a6e14aa 253 Gene3D G3DSA:3.60.20.10 1 252 5.5E-87 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV2_0775 fc96e08b8a0ffa3c144081031a6e14aa 253 SUPERFAMILY SSF56235 2 250 2.23E-33 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VV2_1339 16fd0f6ae544e86639abeaa8f3bcd659 251 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 22 245 2.1E-88 T 14-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family VV1_2338 2b8540535d1f72d1cab0a16381bc9ab8 155 Pfam PF07811 TadE-like protein 9 49 1.9E-10 T 14-10-2018 IPR012495 TadE-like VV2_0007 b7a36011e62b47e0632eaa02b59f8bb4 337 Pfam PF10974 Protein of unknown function (DUF2804) 15 335 7.3E-87 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 VV2_0732 32076ab3d65040b0f1bad613104ef5a1 172 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 153 2.2E-25 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VV1_0844 dbb487accdf5695e0606c1e521730b23 453 PIRSF PIRSF037714 2 453 5.3E-172 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VV1_0844 dbb487accdf5695e0606c1e521730b23 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 316 434 1.0E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VV1_2846 2d25d48bddab53864be1fbe5316f0c74 129 Gene3D G3DSA:3.10.450.40 58 120 1.1E-7 T 14-10-2018 VV1_2995 e0fe680d73948d03ff407345557f25f6 224 Gene3D G3DSA:2.40.160.20 51 195 3.8E-10 T 14-10-2018 VV1_2995 e0fe680d73948d03ff407345557f25f6 224 SUPERFAMILY SSF56925 47 224 2.09E-15 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV2_1189 d57721a930a062c476e861ab0c99898c 421 Pfam PF02687 FtsX-like permease family 314 411 2.0E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV2_1189 d57721a930a062c476e861ab0c99898c 421 Pfam PF12704 MacB-like periplasmic core domain 27 253 1.6E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain VV1_0009 69f648b3ff41b70e938b203eb58df0a1 323 Pfam PF02470 MlaD protein 38 137 4.5E-13 T 14-10-2018 IPR003399 Mce/MlaD VV1_2761 0c65795414da70ff26a1dd89abfb2616 221 PIRSF PIRSF028063 1 221 5.8E-144 T 14-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VV1_2761 0c65795414da70ff26a1dd89abfb2616 221 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.5E-37 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 VV1_2851 79519fb188c97867f41a3279e3d9bdc3 542 Pfam PF08811 Protein of unknown function (DUF1800) 44 535 1.1E-98 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 VV1_2814 9f9bf7574aca2ade87d669c8d7d3ab7a 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.0E-36 T 14-10-2018 IPR010352 Protein of unknown function DUF945 VV2_0127 44380f4537b642a5891d3d4292082064 784 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 783 2.5E-299 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase VV1_0910 b164e5ae8e1a5ba3364bf9362ecf2fe9 528 Pfam PF02646 RmuC family 182 477 7.1E-105 T 14-10-2018 IPR003798 DNA recombination RmuC VV2_1324 4f4beb8d393240243657d8162c6e4adb 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 2.4E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VV1_0422 3f3185a7d4fad6beffb8b4d0a86855fd 294 SUPERFAMILY SSF55186 122 272 1.57E-11 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VV2_1275 5419344587c28a28f38c735cdb34984d 207 Pfam PF09335 SNARE associated Golgi protein 40 165 6.6E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein VV2_0592 2b539f14b9216bf541d1c977ffe53a17 505 Gene3D G3DSA:1.20.1730.10 8 484 5.5E-71 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily VV2_0592 2b539f14b9216bf541d1c977ffe53a17 505 Pfam PF00474 Sodium:solute symporter family 34 416 4.7E-46 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VV1_2279 36319db620ac91eb8c6c17d941ebd888 292 Pfam PF03547 Membrane transport protein 172 284 1.1E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VV1_2279 36319db620ac91eb8c6c17d941ebd888 292 Pfam PF03547 Membrane transport protein 6 157 5.2E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VV1_0815 9ae18ee5415709f16cf756b2c85fb29a 129 Gene3D G3DSA:1.10.3830.10 9 128 2.8E-40 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VV1_0815 9ae18ee5415709f16cf756b2c85fb29a 129 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 5.4E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VV1_0815 9ae18ee5415709f16cf756b2c85fb29a 129 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VV1_0105 2fc584ba31e03f56064d29dc5ccbea39 198 Pfam PF11351 Holin of 3TMs, for gene-transfer release 63 168 2.5E-13 T 14-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release VV1_2561 00a19241c840e22b0107dcb54cc0dec5 67 PIRSF PIRSF037225 1 65 7.4E-28 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VV1_2561 00a19241c840e22b0107dcb54cc0dec5 67 Pfam PF14255 Cysteine-rich CPXCG 10 59 5.3E-20 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein VV1_1473 1a569cd03ccdef5b929f6e54ece335bd 331 Pfam PF01435 Peptidase family M48 155 330 9.5E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VV1_0682 96d3c26d89002118e993a21a6e478741 211 Pfam PF05494 MlaC protein 33 198 9.7E-46 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VV1_0682 96d3c26d89002118e993a21a6e478741 211 PIRSF PIRSF004649 1 211 2.7E-54 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VV1_0682 96d3c26d89002118e993a21a6e478741 211 Gene3D G3DSA:3.10.450.710 25 203 1.7E-37 T 14-10-2018 VV2_1561 8a983e5fcebc7d1a6a77a8f7e0c5cb14 543 Pfam PF13584 Oxygen tolerance 15 466 4.7E-80 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD VV1_0374 d26c1c8165defab49ab9335e1fff8457 167 Pfam PF00816 H-NS histone family 41 142 1.8E-9 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VV1_0374 d26c1c8165defab49ab9335e1fff8457 167 Gene3D G3DSA:4.10.430.10 98 153 3.7E-6 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VV1_2559 280a1c4b241f73ffad9477f0c83ad78c 483 Pfam PF01554 MatE 44 203 5.8E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_2559 280a1c4b241f73ffad9477f0c83ad78c 483 Pfam PF01554 MatE 270 431 2.6E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_2559 280a1c4b241f73ffad9477f0c83ad78c 483 PIRSF PIRSF006603 31 482 1.0E-58 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_2559 280a1c4b241f73ffad9477f0c83ad78c 483 TIGRFAM TIGR00797 matE: MATE efflux family protein 44 448 3.8E-114 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1533 d36544279af458432e892f8d3e83e958 231 SUPERFAMILY SSF54060 20 228 2.59E-94 T 14-10-2018 VV1_1533 d36544279af458432e892f8d3e83e958 231 Pfam PF04231 Endonuclease I 35 227 3.6E-45 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 VV1_1824 d229d5d565b7955a5cf41e480b17f761 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.946 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VV1_1824 d229d5d565b7955a5cf41e480b17f761 210 PIRSF PIRSF006102 3 210 4.0E-73 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV1_1824 d229d5d565b7955a5cf41e480b17f761 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.7E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VV1_1824 d229d5d565b7955a5cf41e480b17f761 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 4.0E-110 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VV1_1433 60dba1b196d397dda742c08e0a82ee3d 486 SUPERFAMILY SSF53067 57 159 9.84E-10 T 14-10-2018 VV1_1433 60dba1b196d397dda742c08e0a82ee3d 486 PIRSF PIRSF028153 1 486 3.6E-236 T 14-10-2018 IPR016871 MSHA biogenesis protein, MshI VV1_2616 e4ee5bd518bef72183214521abe4bfce 158 Pfam PF05751 FixH 7 147 2.1E-44 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH VV2_1347 f91508f8b46320ddd1d70c61d7fdfca9 374 Gene3D G3DSA:1.10.10.10 281 372 7.0E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VV2_1347 f91508f8b46320ddd1d70c61d7fdfca9 374 SUPERFAMILY SSF46894 296 369 2.31E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VV2_1347 f91508f8b46320ddd1d70c61d7fdfca9 374 SMART SM00421 310 367 9.1E-4 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VV2_0657 93e062e7e8bee82a50636c52c8db2bd0 421 Gene3D G3DSA:3.30.460.10 16 134 4.5E-7 T 14-10-2018 VV2_0657 93e062e7e8bee82a50636c52c8db2bd0 421 SUPERFAMILY SSF81301 1 162 4.09E-24 T 14-10-2018 VV2_0589 462631bc0ebcb48a1c40e1ecff8448c2 120 SUPERFAMILY SSF55298 1 116 1.49E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV2_0589 462631bc0ebcb48a1c40e1ecff8448c2 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 2.3E-19 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VV2_0589 462631bc0ebcb48a1c40e1ecff8448c2 120 Gene3D G3DSA:3.30.1330.40 1 119 3.7E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VV1_1878 1be204a987af8e5868cbe655c4372e89 104 SUPERFAMILY SSF46626 17 103 1.33E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_1878 1be204a987af8e5868cbe655c4372e89 104 Pfam PF00034 Cytochrome c 30 104 2.6E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV1_1878 1be204a987af8e5868cbe655c4372e89 104 Gene3D G3DSA:1.10.760.10 23 104 6.7E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VV1_3074 dc0a4ef781951d5fa1376a33e7319248 132 Gene3D G3DSA:3.10.129.10 2 132 4.5E-40 T 14-10-2018 VV1_3074 dc0a4ef781951d5fa1376a33e7319248 132 Pfam PF03061 Thioesterase superfamily 26 98 2.7E-19 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VV1_3074 dc0a4ef781951d5fa1376a33e7319248 132 SUPERFAMILY SSF54637 8 129 2.14E-38 T 14-10-2018 IPR029069 HotDog domain superfamily VV1_2189 69730a5030c7d9d92cd11e169569b53b 195 Pfam PF13489 Methyltransferase domain 21 135 7.8E-16 T 14-10-2018 VV1_2189 69730a5030c7d9d92cd11e169569b53b 195 Gene3D G3DSA:3.40.50.150 1 195 9.1E-50 T 14-10-2018 VV1_2189 69730a5030c7d9d92cd11e169569b53b 195 SUPERFAMILY SSF53335 5 158 1.1E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VV1_1298 6f4de46fad6ab0a4b6e4a7a06269b0f8 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 3.1E-24 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 VV1_0240 9c3fdbac65f6ccd1ef4630119fcb605d 149 Pfam PF04214 Protein of unknown function, DUF 48 118 8.3E-29 T 14-10-2018 IPR007332 Protein of unknown function DUF411 VV1_0610 5ac6232e3831bf1fe6ef917be26b2b6a 211 Pfam PF00293 NUDIX domain 59 201 1.5E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VV1_0610 5ac6232e3831bf1fe6ef917be26b2b6a 211 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 1.2E-60 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 VV1_0610 5ac6232e3831bf1fe6ef917be26b2b6a 211 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VV1_0610 5ac6232e3831bf1fe6ef917be26b2b6a 211 SUPERFAMILY SSF55811 11 206 7.99E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VV1_0610 5ac6232e3831bf1fe6ef917be26b2b6a 211 Gene3D G3DSA:3.90.79.10 1 208 4.9E-62 T 14-10-2018 VV1_2493 8111e9753a36311738615eed177d0fea 179 SUPERFAMILY SSF81901 49 174 9.81E-18 T 14-10-2018 VV1_2493 8111e9753a36311738615eed177d0fea 179 SMART SM00671 104 139 1.2E-4 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2493 8111e9753a36311738615eed177d0fea 179 SMART SM00671 68 103 0.0066 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2493 8111e9753a36311738615eed177d0fea 179 Gene3D G3DSA:1.25.40.10 40 171 3.2E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VV1_2493 8111e9753a36311738615eed177d0fea 179 Pfam PF08238 Sel1 repeat 104 131 0.0039 T 14-10-2018 IPR006597 Sel1-like repeat VV1_2493 8111e9753a36311738615eed177d0fea 179 Pfam PF08238 Sel1 repeat 68 103 0.0011 T 14-10-2018 IPR006597 Sel1-like repeat VV1_1151 7cb944d5691c78f67aecc6e10398e1f4 197 Pfam PF01914 MarC family integral membrane protein 3 192 1.3E-54 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV1_1151 7cb944d5691c78f67aecc6e10398e1f4 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 189 1.4E-30 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VV1_1779 9c8ec992ce36e29495ff844cf0edfeba 209 SUPERFAMILY SSF56925 33 209 2.49E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV1_1779 9c8ec992ce36e29495ff844cf0edfeba 209 Pfam PF13505 Outer membrane protein beta-barrel domain 10 209 3.6E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV1_1779 9c8ec992ce36e29495ff844cf0edfeba 209 Gene3D G3DSA:2.40.160.20 30 209 3.8E-13 T 14-10-2018 VV1_2487 86a2f143d4d0f57c257fd38aa308047c 160 Gene3D G3DSA:3.90.1720.10 18 158 2.8E-9 T 14-10-2018 VV1_2487 86a2f143d4d0f57c257fd38aa308047c 160 SUPERFAMILY SSF54001 53 156 4.81E-8 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VV1_1960 b633ee36d8cf3f581d9dcdbde81ffcb6 166 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 2.1E-22 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 VV1_1345 6a68d6b2e7b35c8c36e378d7548e0643 115 Gene3D G3DSA:3.30.429.10 1 115 8.3E-34 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VV1_1345 6a68d6b2e7b35c8c36e378d7548e0643 115 SUPERFAMILY SSF55331 2 115 2.0E-36 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily VV1_1345 6a68d6b2e7b35c8c36e378d7548e0643 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 1.8E-6 T 14-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VV1_2164 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 VV1_2164 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 14-10-2018 IPR012994 Membrane bound YbgT-like VV1_1939 fa8c3b31de5e7b4d6532ec6aba2c85bc 145 Pfam PF02050 Flagellar FliJ protein 18 140 4.8E-30 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VV1_1939 fa8c3b31de5e7b4d6532ec6aba2c85bc 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 1.5E-34 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VV1_1676 e3fe9ce15006757c2ef9f856eca435fd 361 Pfam PF01594 AI-2E family transporter 14 347 5.8E-52 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like VV2_1126 98650b5c71d70c428d7cb9e969ccee9a 237 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 73 179 1.4E-13 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted VV2_1126 98650b5c71d70c428d7cb9e969ccee9a 237 Gene3D G3DSA:3.10.620.30 32 223 1.0E-72 T 14-10-2018 VV1_0514 6e11b594a07ebb2f7f3db6218e12ba24 386 Pfam PF02690 Na+/Pi-cotransporter 222 330 8.2E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VV1_0514 6e11b594a07ebb2f7f3db6218e12ba24 386 Pfam PF02690 Na+/Pi-cotransporter 34 154 1.7E-20 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VV1_2197 1536add34a83465beeba4164bb0c18f9 129 Gene3D G3DSA:3.10.450.50 1 129 3.0E-33 T 14-10-2018 VV1_2197 1536add34a83465beeba4164bb0c18f9 129 Pfam PF12680 SnoaL-like domain 7 102 9.8E-9 T 14-10-2018 IPR037401 SnoaL-like domain VV1_2197 1536add34a83465beeba4164bb0c18f9 129 SUPERFAMILY SSF54427 1 123 1.29E-32 T 14-10-2018 IPR032710 NTF2-like domain superfamily VV2_1097 ae4f80873e44cf6ff4791aef013667af 479 Pfam PF03573 outer membrane porin, OprD family 55 477 4.6E-13 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 VV2_1097 ae4f80873e44cf6ff4791aef013667af 479 Gene3D G3DSA:2.40.160.10 61 479 4.0E-21 T 14-10-2018 IPR023614 Porin domain superfamily VV2_0040 f2116ea2a5d4e9af5eb274edaaea48d5 117 Pfam PF01925 Sulfite exporter TauE/SafE 17 115 6.5E-9 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VV1_0515 3263ce6410e6a23b6c6840eab33af29b 385 Pfam PF08014 Domain of unknown function (DUF1704) 49 383 5.5E-114 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VV1_0515 3263ce6410e6a23b6c6840eab33af29b 385 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 20 379 5.4E-148 T 14-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VV1_0515 3263ce6410e6a23b6c6840eab33af29b 385 SMART SM01154 46 385 2.0E-154 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 VV1_1747 e9e5e3a23801199aa57d916ad36405c7 448 SUPERFAMILY SSF52540 152 436 1.25E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VV1_1747 e9e5e3a23801199aa57d916ad36405c7 448 Gene3D G3DSA:3.40.50.300 148 358 4.8E-11 T 14-10-2018 VV1_0404 be4b7d28c18d733ade108fd2a14cbe0f 145 Pfam PF04945 YHS domain 39 83 3.8E-11 T 14-10-2018 IPR007029 YHS domain VV1_1258 fa931f67090e622159bddf6151b8eaa3 448 Pfam PF01554 MatE 245 406 1.1E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1258 fa931f67090e622159bddf6151b8eaa3 448 Pfam PF01554 MatE 22 181 8.0E-27 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1258 fa931f67090e622159bddf6151b8eaa3 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 412 8.0E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV1_1258 fa931f67090e622159bddf6151b8eaa3 448 PIRSF PIRSF006603 1 446 9.3E-132 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VV2_1604 75ab65614f0621d712b8ddab33deb001 203 Gene3D G3DSA:3.80.10.10 24 199 3.7E-6 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily VV2_1532 824bcb8bb2fdfa03bf2c168db68c59f1 279 Pfam PF02361 Cobalt transport protein 17 235 7.1E-32 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component VV1_2162 5cbd67852aaeae19ef36d895211f9a81 538 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 17 511 1.9E-177 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VV1_2162 5cbd67852aaeae19ef36d895211f9a81 538 PIRSF PIRSF006446 359 536 2.9E-32 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VV1_2162 5cbd67852aaeae19ef36d895211f9a81 538 PIRSF PIRSF006446 10 340 1.0E-115 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VV2_0774 1bafc0bef12995478e0b181533a31b5f 417 Pfam PF13520 Amino acid permease 9 405 4.1E-33 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV2_0774 1bafc0bef12995478e0b181533a31b5f 417 Gene3D G3DSA:1.20.1740.10 2 416 2.1E-59 T 14-10-2018 VV2_0774 1bafc0bef12995478e0b181533a31b5f 417 PIRSF PIRSF006060 1 415 7.9E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VV2_0348 7c27278851cff8fff2030b5684ec81d9 438 Pfam PF07394 Protein of unknown function (DUF1501) 34 421 5.7E-73 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 VV1_0138 d1675cb5a1aa369e12a2803588d1fb81 184 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 1.2E-47 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VV1_0138 d1675cb5a1aa369e12a2803588d1fb81 184 PIRSF PIRSF004982 2 184 1.2E-60 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VV1_0138 d1675cb5a1aa369e12a2803588d1fb81 184 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 154 8.8E-39 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VV1_0401 29f49634f077e0a22ec351263fa774e4 456 Pfam PF07804 HipA-like C-terminal domain 169 388 2.3E-22 T 14-10-2018 IPR012893 HipA-like, C-terminal VV1_0401 29f49634f077e0a22ec351263fa774e4 456 PIRSF PIRSF028135 4 456 8.0E-234 T 14-10-2018 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like VV1_0049 2c0d2e954ac3ca64288af5f2feae1b3a 185 Pfam PF04279 Intracellular septation protein A 16 157 1.3E-6 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VV1_2779 83296189ec941a71a7482ee42fc4ed45 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 178 1.0E-65 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 VV1_0619 cf63a4294fa9555163244a000ef2bfee 419 Pfam PF01384 Phosphate transporter family 26 407 1.5E-113 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VV1_1828 6bc050183bd74d0d95a6f4e70ee9b4b6 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VV2_1111 76872cf58172ede0bc988eddd9893605 234 Pfam PF04286 Protein of unknown function (DUF445) 140 233 7.7E-9 T 14-10-2018 IPR007383 Protein of unknown function DUF445 VV1_1984 e0ae9f3a0558879c85135ca4c9d5dffe 87 Pfam PF08891 YfcL protein 4 84 5.5E-32 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL VV1_2273 889febb8acc026823677d7f2c8755f43 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.1E-71 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 VV1_2718 99129639442c211ed91bf1961108687d 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 6.1E-33 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 VV1_0251 91326f05c42dad11a461d416475e16c7 127 PIRSF PIRSF005610 1 121 3.1E-16 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VV1_0251 91326f05c42dad11a461d416475e16c7 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 1.1E-37 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VV2_0807 b0b12e316a3842d57caa8d33bc6de692 193 Pfam PF13505 Outer membrane protein beta-barrel domain 9 193 3.8E-23 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel VV2_0807 b0b12e316a3842d57caa8d33bc6de692 193 SUPERFAMILY SSF56925 25 193 1.83E-26 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VV2_0807 b0b12e316a3842d57caa8d33bc6de692 193 Gene3D G3DSA:2.40.160.20 23 193 5.1E-24 T 14-10-2018 VV1_3109 31d9acfa0b36b87d0c5223c4e112b7e5 227 Gene3D G3DSA:3.40.50.720 1 226 2.8E-24 T 14-10-2018 VV1_3109 31d9acfa0b36b87d0c5223c4e112b7e5 227 SUPERFAMILY SSF51735 1 188 4.58E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily VV1_3109 31d9acfa0b36b87d0c5223c4e112b7e5 227 Pfam PF00106 short chain dehydrogenase 8 186 6.7E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VV2_0619 8c9b967944784378c827fdc9116a1384 187 SUPERFAMILY SSF53098 111 180 7.59E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily VV2_0518 5e054f156a6355b5157205a132edca42 92 Pfam PF03889 Domain of unknown function 20 57 9.1E-23 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 VV2_1587 4fb5d7f3f880301647824e221917cae7 296 Gene3D G3DSA:1.10.3720.10 1 283 5.4E-74 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1587 4fb5d7f3f880301647824e221917cae7 296 SUPERFAMILY SSF161098 10 296 2.09E-68 T 14-10-2018 IPR035906 MetI-like superfamily VV2_1587 4fb5d7f3f880301647824e221917cae7 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 2.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VV1_1322 df90b6c1f544fc6e812d16069bbd8cff 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 2.0E-28 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VV1_1322 df90b6c1f544fc6e812d16069bbd8cff 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 2.0E-42 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VV1_3218 25709df957bb100a2bc85003a0092c4e 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 6.5E-36 T 14-10-2018 IPR022072 Protein of unknown function DUF3624 VV2_1653 7aba20eba35bf176849bbb29fb0204b5 104 SUPERFAMILY SSF54909 4 69 1.7E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel VV1_0394 4dae5bd8b8d15f7925e410f74a8c3602 174 Pfam PF14350 Beta protein 2 168 2.1E-22 T 14-10-2018 IPR025683 Protein beta VV2_0156 fce3b46beefb18e7312e184cb3e22497 183 Pfam PF14316 Domain of unknown function (DUF4381) 15 156 1.3E-25 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 VV1_2465 0bfafea16be823a5c2833de5f168e863 511 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 129 366 9.4E-82 T 14-10-2018 IPR008766 Replication gene A protein GO:0006260 VV1_0988 7c246be117d77effd130d8f553150bd2 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 2.5E-19 T 14-10-2018 IPR001727 Gdt1 family VV1_0988 7c246be117d77effd130d8f553150bd2 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 2.5E-20 T 14-10-2018 IPR001727 Gdt1 family VV1_2261 6f6628c4e1a84a95703a3810c200ee5f 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 413 7.0E-18 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VV2_1035 9932e2d0cb0a18253436299af57cf980 202 Pfam PF06055 Exopolysaccharide synthesis, ExoD 23 193 1.4E-50 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD VV2_1035 9932e2d0cb0a18253436299af57cf980 202 PIRSF PIRSF033239 10 202 1.1E-60 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD VV1_0093 36e276c43db09cb50db213d7ccd806a9 776 Pfam PF12571 Phage tail-collar fibre protein 10 163 2.2E-17 T 14-10-2018 IPR022225 Phage tail fibre protein VV1_1610 cc666c60f9d932bd816b6eb2013c9b0d 264 Pfam PF01578 Cytochrome C assembly protein 37 262 1.8E-45 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VV1_1265 9ec2817348cec93cc9fdb367a8d0585b 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 7.2E-37 T 14-10-2018 IPR001107 Band 7 domain VV2_0268 ebfc1c29d39c32c6e4d203b08266ebbe 823 Pfam PF02687 FtsX-like permease family 731 813 7.0E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV2_0268 ebfc1c29d39c32c6e4d203b08266ebbe 823 Pfam PF02687 FtsX-like permease family 289 381 3.3E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VV1_2737 b4e3f8e2251f6be2fb79bb0ff5fa8844 171 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 26 162 2.3E-18 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 VV1_2841 eae9a96749214df5290f744346583002 220 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 1.4E-85 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 VV2_0318 01c3789c5c44e1218513d3173fb0e774 93 Pfam PF10115 Transcriptional activator HlyU 2 92 1.3E-40 T 14-10-2018 IPR018772 Transcription activator HlyU VV1_3138 63f4112602ee6427da5435c0e82ede25 279 Pfam PF11207 Protein of unknown function (DUF2989) 23 225 1.9E-75 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 VV1_2902 de314db9b4d1d5501b18de9e553d4f7e 79 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 3 79 3.1E-38 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 VV1_2902 de314db9b4d1d5501b18de9e553d4f7e 79 Pfam PF06146 Phosphate-starvation-inducible E 11 70 1.2E-9 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VV1_2586 af5d76f5ef3694aeefea2bf1d9d7d25d 195 Pfam PF11748 Protein of unknown function (DUF3306) 5 112 2.4E-19 T 14-10-2018 IPR021735 Protein of unknown function DUF3306 VV2_1470 978bf7c7136567558fedb5d97f4543cd 133 Gene3D G3DSA:1.20.120.10 27 124 2.2E-10 T 14-10-2018 VV2_1470 978bf7c7136567558fedb5d97f4543cd 133 SUPERFAMILY SSF47175 28 124 3.41E-28 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VV2_1470 978bf7c7136567558fedb5d97f4543cd 133 Pfam PF07361 Cytochrome b562 28 124 7.1E-28 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VV1_2933 cc67f335f42d632ba93da9d0c1f5b23c 257 Pfam PF07103 Protein of unknown function (DUF1365) 9 245 4.7E-68 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 VV2_0311 a23452d6e4d67bcf84295db5c26b20f7 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 46 290 2.3E-59 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VV2_1565 a6727e4a12734990d557bfbcaf8b5d4f 305 Pfam PF01882 Protein of unknown function DUF58 53 137 1.7E-20 T 14-10-2018 IPR002881 Domain of unknown function DUF58 VV1_0304 f336f09c1e119bb58498f7515a2055e2 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 8.2E-29 T 14-10-2018 IPR006696 Protein of unknown function DUF423 VV2_1476 89ccec771b9a2041046d0b7083d1f35b 471 Pfam PF03929 PepSY-associated TM region 23 408 2.9E-64 T 14-10-2018 IPR005625 PepSY-associated TM protein VV1_2135 2189dfa501854efd58f7588ea4b09376 225 Pfam PF09335 SNARE associated Golgi protein 66 181 3.5E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein VV1_2388 d633b0c8a88182bcf0321d0fec5e90a3 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 1.9E-98 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 VV2_1435 0a4099e6141d72863c29a4facb327fe5 158 Pfam PF11286 Protein of unknown function (DUF3087) 1 155 1.2E-51 T 14-10-2018 IPR021438 Protein of unknown function DUF3087 VV2_0639 7879a1ca4951be96598e7392ac714ce6 114 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 1 111 1.8E-43 T 14-10-2018 IPR014115 Type-F conjugative transfer system protein TrbI VV2_0639 7879a1ca4951be96598e7392ac714ce6 114 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 6 108 1.9E-18 T 14-10-2018 IPR014115 Type-F conjugative transfer system protein TrbI VV2_1488 b138768f83b9864bb520f3a7bd4b306d 169 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 27 168 1.3E-18 T 14-10-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0016020|GO:0038023 VV1_0886 b59d40d2c73f066114e8bcc81eb4614a 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 6.2E-89 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 VV1_2903 3a9a71867e8f0c18b9d8f7d66a01d0f3 141 Pfam PF05232 Chlorhexidine efflux transporter 2 63 1.0E-21 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter VV1_2903 3a9a71867e8f0c18b9d8f7d66a01d0f3 141 Pfam PF05232 Chlorhexidine efflux transporter 69 131 8.0E-23 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter VV1_0953 c4555981726f3cbff4c91816ba3435a9 257 Pfam PF09836 Putative DNA-binding domain 5 96 1.2E-21 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria VV2_1029 d91d9ccde046e1216b16e874ce182c0a 251 SUPERFAMILY SSF56112 23 191 2.48E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily VV2_0343 036a893d7160b535b01ce26a0e570fc3 140 Pfam PF04143 Sulphur transport 3 126 9.1E-11 T 14-10-2018 IPR007272 Sulphur transport domain VV1_1479 58a6d4073ff89f28cd8f93d11e2e4d49 158 Pfam PF06271 RDD family 9 148 1.7E-21 T 14-10-2018 IPR010432 RDD VV1_2626 0dbd24de69ed51ed5c83374201c03560 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 6.4E-40 T 14-10-2018 IPR022090 Protein of unknown function DUF3634 VV1_0191 73f52c4a4343c1575661451733dea79f 176 Pfam PF17323 Trans-membrane regulatory protein ToxS 25 174 7.2E-71 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VV1_0191 73f52c4a4343c1575661451733dea79f 176 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 5 176 6.0E-87 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VV1_3183 6ee6f97ee89e7551028922d220bdeb29 237 Pfam PF13280 WYL domain 67 155 6.1E-12 T 14-10-2018 IPR026881 WYL domain VV2_1205 3ec07e91121580dd927fe2ba872d5245 119 Pfam PF04219 Protein of unknown function, DUF 12 100 4.0E-34 T 14-10-2018 IPR007335 Protein of unknown function DUF413 VV2_0144 e6443fbf41f980518c95b6c25306a9c0 141 Pfam PF11225 Protein of unknown function (DUF3024) 83 141 6.7E-18 T 14-10-2018 IPR021388 Bacteriophage 933W, L0084 VV1_1147 06f5819a3738cbc46e8d2a126e5333f7 206 Pfam PF07947 YhhN family 26 204 2.8E-34 T 14-10-2018 IPR012506 YhhN-like GO:0016021 VV1_1996 6e3309bc8108ab57b4ce0c69b1836979 163 Pfam PF02674 Colicin V production protein 4 142 6.7E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VV1_2746 1f7cb58bc5c22317e0586b7516aec9fc 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 245 4.8E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VV2_0416 8eba61bd0314c092b75169dc0ed20107 299 Pfam PF13930 DNA/RNA non-specific endonuclease 156 284 5.9E-38 T 14-10-2018 VV1_0563 e1be7883d916213e6690c9e1f73f1127 262 Pfam PF01925 Sulfite exporter TauE/SafE 14 249 5.9E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VV1_2877 4b3b56c312af7f5763b1ac28fbcd554c 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 4.4E-48 T 14-10-2018 IPR014320 Phage shock protein, PspC VV1_2877 4b3b56c312af7f5763b1ac28fbcd554c 129 Pfam PF04024 PspC domain 4 62 6.2E-15 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VV2_1214 75c0e9bf82d848cad7d38803c924bbee 349 Pfam PF01757 Acyltransferase family 16 335 2.1E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VV1_0338 af19242a50b4378bad0ae0bf3edd0bd5 101 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 6.0E-36 T 14-10-2018 IPR022069 Protein of unknown function DUF3622 VV1_3199 196eca7913126c9b310e17e0dfed9afe 148 Pfam PF02371 Transposase IS116/IS110/IS902 family 84 148 8.0E-12 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VV1_1746 67b28b2080da73cc4a89229cf3a0699a 172 Pfam PF01478 Type IV leader peptidase family 7 111 4.8E-11 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VV1_1535 6b1e78a69f5f22e6b3736bfca2235ad7 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 2.9E-27 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 VV2_0563 1663755fe160cfc308c7d6fb673a0a2d 298 Pfam PF02104 SURF1 family 62 270 1.8E-22 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VV2_0084 60e880b6bd77c6efceef2201fb8625e3 96 Pfam PF04964 Flp/Fap pilin component 24 69 3.3E-11 T 14-10-2018 IPR007047 Flp/Fap pilin component VV1_0561 053ebd112ec625c5b2c97dd18d2d33ff 206 Pfam PF03458 UPF0126 domain 95 163 9.0E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VV1_0561 053ebd112ec625c5b2c97dd18d2d33ff 206 Pfam PF03458 UPF0126 domain 8 81 5.5E-23 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 VV1_2196 a7befd8d630b9d1408653f4f8ca15109 180 Pfam PF06042 Nucleotidyltransferase 25 178 3.8E-57 T 14-10-2018 IPR009267 Putative nucleotidyltransferase VV2_1626 f648a4d3ed9b0e4f5771d44d535668a6 342 Pfam PF01757 Acyltransferase family 6 314 1.3E-30 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VV1_2640 d685d2fa126af907a82c547145eafe48 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 6.1E-28 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 VV1_0346 f8a170ce67954480117810a401b61b2b 519 Pfam PF03806 AbgT putative transporter family 19 517 1.3E-211 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VV2_1245 fc07cd4031a15ac8a034191948502706 321 Pfam PF15575 Immunity protein 49 95 295 3.7E-7 T 14-10-2018 IPR029074 Immunity protein 49